Psyllid ID: psy15208
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1027 | 2.2.26 [Sep-21-2011] | |||||||
| A4G975 | 479 | Adenosylhomocysteinase OS | yes | N/A | 0.454 | 0.974 | 0.782 | 0.0 | |
| A6T2Y9 | 479 | Adenosylhomocysteinase OS | yes | N/A | 0.454 | 0.974 | 0.778 | 0.0 | |
| B2U774 | 474 | Adenosylhomocysteinase OS | yes | N/A | 0.448 | 0.972 | 0.745 | 0.0 | |
| B2AGG2 | 472 | Adenosylhomocysteinase OS | yes | N/A | 0.448 | 0.976 | 0.742 | 0.0 | |
| Q8Y387 | 474 | Adenosylhomocysteinase OS | yes | N/A | 0.448 | 0.972 | 0.743 | 0.0 | |
| Q1LS20 | 472 | Adenosylhomocysteinase OS | yes | N/A | 0.448 | 0.976 | 0.740 | 0.0 | |
| Q5P6B7 | 470 | Adenosylhomocysteinase OS | yes | N/A | 0.454 | 0.993 | 0.734 | 0.0 | |
| Q476T8 | 472 | Adenosylhomocysteinase OS | yes | N/A | 0.448 | 0.976 | 0.740 | 0.0 | |
| Q0KF25 | 472 | Adenosylhomocysteinase OS | yes | N/A | 0.448 | 0.976 | 0.733 | 0.0 | |
| Q1CY84 | 476 | Adenosylhomocysteinase OS | yes | N/A | 0.451 | 0.974 | 0.723 | 0.0 |
| >sp|A4G975|SAHH_HERAR Adenosylhomocysteinase OS=Herminiimonas arsenicoxydans GN=ahcY PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/469 (78%), Positives = 414/469 (88%), Gaps = 2/469 (0%)
Query: 561 NSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAV 620
N +D+VIAD++LS WG KEI IAETEM L++IREEF ++PLKGARI+GSIHMTIQTAV
Sbjct: 11 NFSDYVIADLSLSVWGDKEIRIAETEMPGLMAIREEFAAAQPLKGARITGSIHMTIQTAV 70
Query: 621 LIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPG 680
LI+TL+ LGA+VRW+SCNIYSTQDHAAAAIA+ G PVFA KGE++ DYWE+ HRIF+WP
Sbjct: 71 LIQTLEALGAKVRWASCNIYSTQDHAAAAIAAAGTPVFAVKGETLDDYWEYTHRIFEWPN 130
Query: 681 NSNTEQ--ANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSK 738
+ +NMILDDGGDAT LLHLG +AE + S+L+NP SEEE+CLF SIK L +D+
Sbjct: 131 DDKGAPVYSNMILDDGGDATLLLHLGTRAEKDASVLNNPGSEEEICLFNSIKKHLAVDAT 190
Query: 739 WYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLID 798
WYS RL QI GVTEETTTGV+RL +M KEGKL+FPAINVNDSVTKSKFDNLYGCRESL+D
Sbjct: 191 WYSKRLPQILGVTEETTTGVHRLYQMHKEGKLAFPAINVNDSVTKSKFDNLYGCRESLVD 250
Query: 799 GIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT 858
GIKRATDVMIAGK+AVI GYGDVGKGSAQAMRALSAQVW+ EIDPICALQAAMEG+ VVT
Sbjct: 251 GIKRATDVMIAGKVAVIAGYGDVGKGSAQAMRALSAQVWVTEIDPICALQAAMEGYRVVT 310
Query: 859 MEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKP 918
M+YA ++GDIFVTCTGNYHVITHDHM MKDQAIVCNIGHFDNEIEV LK+Y WENIKP
Sbjct: 311 MDYAAEHGDIFVTCTGNYHVITHDHMAKMKDQAIVCNIGHFDNEIEVAALKQYTWENIKP 370
Query: 919 QVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGI 978
QVDHIIFPDGK+IILLAEGRLVNLGCGTGHPSYVMSSSFANQT+AQIEL+ NT NYP+G+
Sbjct: 371 QVDHIIFPDGKRIILLAEGRLVNLGCGTGHPSYVMSSSFANQTIAQIELYANTKNYPVGV 430
Query: 979 YTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
YTLPK LDEKVARLQLKKLN QL+ LTD+QA YIGV K GPYK ++YRY
Sbjct: 431 YTLPKHLDEKVARLQLKKLNSQLTTLTDEQANYIGVQKAGPYKPEHYRY 479
|
May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. Herminiimonas arsenicoxydans (taxid: 204773) EC: 3EC: .EC: 3EC: .EC: 1EC: .EC: 1 |
| >sp|A6T2Y9|SAHH_JANMA Adenosylhomocysteinase OS=Janthinobacterium sp. (strain Marseille) GN=ahcY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/469 (77%), Positives = 414/469 (88%), Gaps = 2/469 (0%)
Query: 561 NSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAV 620
N +D+VIAD++LS WG KEI IAETEM L++IREEF ++PLKGARI+GSIHMTIQTAV
Sbjct: 11 NFSDYVIADLSLSAWGDKEIRIAETEMPGLMAIREEFAAAQPLKGARITGSIHMTIQTAV 70
Query: 621 LIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPG 680
LI+TL+ LGA+VRW+SCNIYSTQDHAAAAIA+ G PVFA KGE++ DYWE+ HRIF+WP
Sbjct: 71 LIQTLEALGAKVRWASCNIYSTQDHAAAAIAAAGTPVFAVKGETLDDYWEYTHRIFEWPN 130
Query: 681 NSNTEQ--ANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSK 738
+ +NMILDDGGDAT LLHLG +AE + S+L+NP SEEE+CLF SIK L +D+
Sbjct: 131 DDKGAPVYSNMILDDGGDATLLLHLGTRAEKDASVLNNPGSEEEICLFNSIKKHLAVDAT 190
Query: 739 WYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLID 798
WYS RL QI GVTEETTTGV+RL +M KEGKL+FPAINVNDSVTKSKFDNLYGCRESL+D
Sbjct: 191 WYSKRLPQILGVTEETTTGVHRLYQMHKEGKLAFPAINVNDSVTKSKFDNLYGCRESLVD 250
Query: 799 GIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT 858
GIKRATDVMIAGK+AVI GYGDVGKGSAQAMRALSAQVW+ EIDPICALQAAMEG+ VVT
Sbjct: 251 GIKRATDVMIAGKVAVIAGYGDVGKGSAQAMRALSAQVWVTEIDPICALQAAMEGYRVVT 310
Query: 859 MEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKP 918
MEYA ++GDIFVTCTGNYHVITH+HM+ MKDQAIVCNIGHFDNEIEV LK+Y WENIKP
Sbjct: 311 MEYAAEHGDIFVTCTGNYHVITHEHMKKMKDQAIVCNIGHFDNEIEVAALKQYTWENIKP 370
Query: 919 QVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGI 978
QVDHIIFPDGK+IILLAEGRLVNLGCGTGHPSYVMSSSFANQT+AQIEL+ NT NYP+G+
Sbjct: 371 QVDHIIFPDGKRIILLAEGRLVNLGCGTGHPSYVMSSSFANQTIAQIELYANTKNYPVGV 430
Query: 979 YTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
YTLPK LDEKVARLQLKKLN QL+ LT +QA YIGV + GPYK ++YRY
Sbjct: 431 YTLPKHLDEKVARLQLKKLNAQLTTLTTEQANYIGVQQTGPYKPEHYRY 479
|
May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. Janthinobacterium sp. (strain Marseille) (taxid: 375286) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|B2U774|SAHH_RALPJ Adenosylhomocysteinase OS=Ralstonia pickettii (strain 12J) GN=ahcY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/468 (74%), Positives = 407/468 (86%), Gaps = 7/468 (1%)
Query: 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIE 623
D+++ADI L+ WGRKEI IAETEM L++IR+EF S+PLKGARI+GS+HMTIQTAVLIE
Sbjct: 10 DYLVADIKLADWGRKEIAIAETEMPGLMAIRDEFAASQPLKGARIAGSLHMTIQTAVLIE 69
Query: 624 TLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSN 683
TLK LGA+VRW+SCNI+STQDHAAAAIA+ G PVFAFKGES+ +YW+F HRIF+W
Sbjct: 70 TLKALGADVRWASCNIFSTQDHAAAAIAATGTPVFAFKGESLQEYWDFTHRIFEWADGGT 129
Query: 684 TEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSSR 743
NMILDDGGDAT LLHLGA+AE ++S+L++P SEEE LF +IK KL D+ +YS
Sbjct: 130 ---PNMILDDGGDATLLLHLGAKAEKDVSVLAHPGSEEETFLFAAIKEKLAKDATFYSRN 186
Query: 744 LKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRA 803
L IKGVTEETTTGV+RL +M + G+L FPAINVNDSVTKSKFDNLYGCRESL+DGIKRA
Sbjct: 187 LDAIKGVTEETTTGVHRLYQMAQRGELRFPAINVNDSVTKSKFDNLYGCRESLVDGIKRA 246
Query: 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAK 863
TDVMIAGK+A++ GYGDVGKGSAQA+RALSAQVW+ EIDPICALQAAMEG+ VVTM+YA
Sbjct: 247 TDVMIAGKVAIVAGYGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRVVTMDYAA 306
Query: 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHI 923
++GDIFVTCTGNYHVITHDHM MKDQAIVCNIGHFDNEI++ ++KY+WE IKPQVDH+
Sbjct: 307 EHGDIFVTCTGNYHVITHDHMAKMKDQAIVCNIGHFDNEIDIASVEKYQWEEIKPQVDHV 366
Query: 924 IFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNN----TSNYPIGIY 979
IFPDGKKII+LA+GRLVNLGC TGHPSYVMSSSFANQT+AQIEL+ ++ YP+G+Y
Sbjct: 367 IFPDGKKIIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWTEAVKGSNKYPVGVY 426
Query: 980 TLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
TLPK LDEKVARLQLKKLN QL++LTDQQA YIGVSK GPYK D+YRY
Sbjct: 427 TLPKHLDEKVARLQLKKLNAQLTELTDQQAAYIGVSKEGPYKADHYRY 474
|
May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. Ralstonia pickettii (strain 12J) (taxid: 402626) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|B2AGG2|SAHH_CUPTR Adenosylhomocysteinase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=ahcY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/466 (74%), Positives = 407/466 (87%), Gaps = 5/466 (1%)
Query: 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIE 623
D+++ADINL+ WGRKEI IAETEM L++IR+EF ++PLKGARI+GS+HMTIQTAVLIE
Sbjct: 10 DYLVADINLAGWGRKEIAIAETEMPGLMAIRDEFAAAQPLKGARIAGSLHMTIQTAVLIE 69
Query: 624 TLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSN 683
TLK LGA+VRW+SCNI+STQDHAAAAIA+ G PVFAFKGES+ +YW+F HRIFDW ++
Sbjct: 70 TLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAFKGESLKEYWDFTHRIFDW---AD 126
Query: 684 TEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSSR 743
NMILDDGGDAT LLHLGA+AE + S+++NP SEEE LF +IK KL D WYS
Sbjct: 127 GGTPNMILDDGGDATLLLHLGARAEKDQSVIANPGSEEETFLFAAIKEKLAKDPSWYSRN 186
Query: 744 LKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRA 803
L I+GVTEETTTGV+RL +M ++G+L FPAINVNDSVTKSKFDNLYGCRESL+DGIKRA
Sbjct: 187 LAAIRGVTEETTTGVHRLYQMAQKGELRFPAINVNDSVTKSKFDNLYGCRESLVDGIKRA 246
Query: 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAK 863
TDVMIAGKIAV+ GYGDVGKGSAQA+RALSAQVW+ EIDPICALQAAMEG+ VVTM+YA
Sbjct: 247 TDVMIAGKIAVVAGYGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRVVTMDYAA 306
Query: 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHI 923
++GDIFVTCTGNYHVITH+HM MKDQAIVCNIGHFDNEI++ ++KY+W+ IKPQVDH+
Sbjct: 307 EHGDIFVTCTGNYHVITHEHMAKMKDQAIVCNIGHFDNEIDIASIEKYEWDEIKPQVDHV 366
Query: 924 IFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFN--NTSNYPIGIYTL 981
FPDGKK+I+LA+GRLVNLGC TGHPSYVMSSSFANQT+AQIEL+ ++ YP+G+YTL
Sbjct: 367 KFPDGKKLIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWQERDSGKYPVGVYTL 426
Query: 982 PKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
PK LDEKVARLQL+KLN QL++LTDQQA YIGV K GPYK D+YRY
Sbjct: 427 PKHLDEKVARLQLRKLNAQLTELTDQQAAYIGVKKEGPYKADHYRY 472
|
May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. Cupriavidus taiwanensis (strain R1 / LMG 19424) (taxid: 164546) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q8Y387|SAHH_RALSO Adenosylhomocysteinase OS=Ralstonia solanacearum (strain GMI1000) GN=ahcY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/468 (74%), Positives = 404/468 (86%), Gaps = 7/468 (1%)
Query: 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIE 623
D+++ADI L+ WGRKEI IAETEM L++IR+EF S+PLKGARI+GS+HMTIQTAVLIE
Sbjct: 10 DYLVADIKLADWGRKEIAIAETEMPGLMAIRDEFAASQPLKGARIAGSLHMTIQTAVLIE 69
Query: 624 TLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSN 683
TLK LGA+VRW+SCNI+STQDHAAAAIA+ G PVFAFKGES+ +YW+F HRIF+W
Sbjct: 70 TLKALGADVRWASCNIFSTQDHAAAAIAASGTPVFAFKGESLKEYWDFTHRIFEWADGGT 129
Query: 684 TEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSSR 743
NMILDDGGDAT LLHLGA+AE + S+++ P SEEE LF +IK KL D+ +YS
Sbjct: 130 ---PNMILDDGGDATLLLHLGAKAEQDASVIAKPGSEEETFLFAAIKEKLAKDATFYSRN 186
Query: 744 LKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRA 803
L IKGVTEETTTGV+RL +M + G+L FPAINVNDSVTKSKFDNLYGCRESL+DGIKRA
Sbjct: 187 LDAIKGVTEETTTGVHRLYQMAQRGELRFPAINVNDSVTKSKFDNLYGCRESLVDGIKRA 246
Query: 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAK 863
TDVMIAGK+AV+ GYGDVGKGSAQA+RALSAQVW+ EIDPICALQAAMEG+ VVTM+YA
Sbjct: 247 TDVMIAGKVAVVAGYGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRVVTMDYAA 306
Query: 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHI 923
++GDIFVTCTGNYHVITHDHM MKDQAIVCNIGHFDNEI++ +++Y+WE IKPQVDH+
Sbjct: 307 EHGDIFVTCTGNYHVITHDHMAKMKDQAIVCNIGHFDNEIDIASVEQYQWEEIKPQVDHV 366
Query: 924 IFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNN----TSNYPIGIY 979
IFPDGKKII+LA+GRLVNLGC TGHPSYVMSSSFANQT+AQIEL+ +S YP+G+Y
Sbjct: 367 IFPDGKKIIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWTEAQKGSSKYPVGVY 426
Query: 980 TLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
TLPK LDEKVARLQLKKLN QL+ LTD+QA YIGVSK GPYK D+YRY
Sbjct: 427 TLPKHLDEKVARLQLKKLNAQLTVLTDKQAAYIGVSKEGPYKADHYRY 474
|
May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. Ralstonia solanacearum (strain GMI1000) (taxid: 267608) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q1LS20|SAHH_RALME Adenosylhomocysteinase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=ahcY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/466 (74%), Positives = 403/466 (86%), Gaps = 5/466 (1%)
Query: 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIE 623
D+++ADI L+ WGRKEI IAETEM L++IR+EF ++PLKGARI+GS+HMTIQTAVLIE
Sbjct: 10 DYIVADIGLAGWGRKEIAIAETEMPGLMAIRDEFAAAQPLKGARIAGSLHMTIQTAVLIE 69
Query: 624 TLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSN 683
TLK LGA+VRW+SCNI+STQDHAAAAIA+ G PVFAFKGES+ +YW+F HRIFDW
Sbjct: 70 TLKALGADVRWASCNIFSTQDHAAAAIAASGTPVFAFKGESLKEYWDFTHRIFDWADGGT 129
Query: 684 TEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSSR 743
NMILDDGGDAT LLHLGA+AE + S+++ P SEEE LF +IK KL DS WYS
Sbjct: 130 P---NMILDDGGDATLLLHLGARAEKDASLIAKPTSEEETFLFAAIKEKLAKDSTWYSRN 186
Query: 744 LKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRA 803
L I+GVTEETTTGV+RL +M ++G+L FPAINVNDSVTKSKFDNLYGCRESL+DGIKRA
Sbjct: 187 LAAIRGVTEETTTGVHRLYQMAQKGELKFPAINVNDSVTKSKFDNLYGCRESLVDGIKRA 246
Query: 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAK 863
TDVMIAGKIAV+ GYGDVGKGSAQA+RALSAQVW+ EIDPICALQAAMEG+ VVTM+YA
Sbjct: 247 TDVMIAGKIAVVAGYGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRVVTMDYAA 306
Query: 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHI 923
++GDIFVTCTGNYHVITHDHM MKDQAIVCNIGHFDNEI++ ++KY+W+ IKPQVDH+
Sbjct: 307 EHGDIFVTCTGNYHVITHDHMAKMKDQAIVCNIGHFDNEIDIASVEKYEWDEIKPQVDHV 366
Query: 924 IFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELF--NNTSNYPIGIYTL 981
FPDGKKII+LA+GRLVNLGC TGHPSYVMSSSFANQT+AQIEL+ ++ YP+G+Y L
Sbjct: 367 KFPDGKKIIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWAERDSGKYPVGVYVL 426
Query: 982 PKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
PK LDEKVARLQL+KLN QL++LT+QQA YIGV K GPYK D+YRY
Sbjct: 427 PKHLDEKVARLQLRKLNAQLTELTEQQAAYIGVKKEGPYKADHYRY 472
|
May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) (taxid: 266264) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q5P6B7|SAHH_AROAE Adenosylhomocysteinase OS=Aromatoleum aromaticum (strain EbN1) GN=ahcY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/470 (73%), Positives = 403/470 (85%), Gaps = 3/470 (0%)
Query: 558 VLKNSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQ 617
V +N D+V+AD+ L+ WGRKEI IAETEM L++IREEF +PLKGARI+GS+HMTIQ
Sbjct: 4 VAENFTDYVVADLALAGWGRKEIRIAETEMPGLMAIREEFAVVQPLKGARITGSLHMTIQ 63
Query: 618 TAVLIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFD 677
TAVLIETL LGAEVRW+SCNI+STQDHAAAAIA+ G+PVFA KGES++DYW++ HRIF+
Sbjct: 64 TAVLIETLTALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAVKGESLADYWDYTHRIFE 123
Query: 678 WPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDS 737
W + +NMILDDGGDAT LLHLGA+AE ++S+L+ P SEEE LF +I+ KL D
Sbjct: 124 W---RDGGYSNMILDDGGDATLLLHLGARAEKDVSVLAKPGSEEERVLFAAIRAKLASDP 180
Query: 738 KWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLI 797
WYS RL I+GVTEETTTGV+RL +MF+ G+L FPAINVNDSVTKSKFDNLYGCRESL+
Sbjct: 181 TWYSVRLAAIRGVTEETTTGVHRLYQMFERGELKFPAINVNDSVTKSKFDNLYGCRESLV 240
Query: 798 DGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV 857
DGIKRATDVM+AGK+AV+ GYGDVGKGSAQA+RALSAQVW+ EIDPICALQAAMEG+ VV
Sbjct: 241 DGIKRATDVMVAGKVAVVCGYGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRVV 300
Query: 858 TMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIK 917
TM+YA ++ DIFVTCTGNYHVI HDHM MKDQAIVCNIGHFDNEI+V ++ Y+WE IK
Sbjct: 301 TMDYAAEHADIFVTCTGNYHVIRHDHMARMKDQAIVCNIGHFDNEIDVASIEGYEWEEIK 360
Query: 918 PQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIG 977
PQVDH+IFPDGK+IILLA+GRLVNLGC TGHPSYVMSSSFANQT+AQIELF T++YP+G
Sbjct: 361 PQVDHVIFPDGKRIILLAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELFTRTADYPVG 420
Query: 978 IYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
+YTLPK LDEKVARLQLKKLN QL++L QA YIGV GPYK +YRY
Sbjct: 421 VYTLPKHLDEKVARLQLKKLNAQLTELRPDQAAYIGVPVEGPYKSAHYRY 470
|
May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. Aromatoleum aromaticum (strain EbN1) (taxid: 76114) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q476T8|SAHH_CUPPJ Adenosylhomocysteinase OS=Cupriavidus pinatubonensis (strain JMP134 / LMG 1197) GN=ahcY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/466 (74%), Positives = 404/466 (86%), Gaps = 5/466 (1%)
Query: 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIE 623
D+++ADI+L+ WGRKEI IAETEM L++IR+EF ++PLKGARI+GS+HMTIQTAVLIE
Sbjct: 10 DYLVADISLAGWGRKEIAIAETEMPGLMAIRDEFAAAQPLKGARIAGSLHMTIQTAVLIE 69
Query: 624 TLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSN 683
TLK LGA+VRW+SCNI+STQDHAAAAIA+ G PVFAFKGES+ +YW+F HRIFDW
Sbjct: 70 TLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAFKGESLKEYWDFTHRIFDWVDGGT 129
Query: 684 TEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSSR 743
NMILDDGGDAT LLHLGA+AE + S+++NP SEEE LF +IK KL D WYS
Sbjct: 130 P---NMILDDGGDATLLLHLGAKAEKDASLIANPGSEEETFLFAAIKEKLAKDPSWYSRN 186
Query: 744 LKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRA 803
L I+GVTEETTTGV+RL +M ++G L FPAINVNDSVTKSKFDNLYGCRESL+DGIKRA
Sbjct: 187 LAAIRGVTEETTTGVHRLYQMAQKGDLKFPAINVNDSVTKSKFDNLYGCRESLVDGIKRA 246
Query: 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAK 863
TDVMIAGKIA++ GYGDVGKGSAQA+RALSAQVW+ EIDPICALQAAMEG+ VVTM+YA
Sbjct: 247 TDVMIAGKIAIVAGYGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRVVTMDYAA 306
Query: 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHI 923
++GDIFVTCTGNYHVITHDHM MKDQAIVCNIGHFDNEI++ ++KY+W+ IKPQVDH+
Sbjct: 307 EHGDIFVTCTGNYHVITHDHMARMKDQAIVCNIGHFDNEIDIASIEKYEWDEIKPQVDHV 366
Query: 924 IFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFN--NTSNYPIGIYTL 981
FPDGKKII+LA+GRLVNLGC TGHPSYVMSSSFANQT+AQIEL+ ++ YP+G+YTL
Sbjct: 367 KFPDGKKIIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWQERDSGKYPVGVYTL 426
Query: 982 PKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
PK LDEKVARLQL+KLN QL++LT+QQA YIGV K GPYK D+YRY
Sbjct: 427 PKHLDEKVARLQLRKLNAQLTELTEQQAAYIGVKKEGPYKADHYRY 472
|
May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. Cupriavidus pinatubonensis (strain JMP134 / LMG 1197) (taxid: 264198) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q0KF25|SAHH_CUPNH Adenosylhomocysteinase OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ahcY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/466 (73%), Positives = 403/466 (86%), Gaps = 5/466 (1%)
Query: 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIE 623
D+++ADINL+ WGRKEI IAETEM L++IR+EF ++PLKGARI+GS+HMTIQTAVLIE
Sbjct: 10 DYLVADINLAGWGRKEIAIAETEMPGLMAIRDEFAAAQPLKGARIAGSLHMTIQTAVLIE 69
Query: 624 TLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSN 683
TLK LGA+VRW+SCNI+STQDHAAAAIA+ G PVFAFKGES+ +YW+F HRIFDW
Sbjct: 70 TLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAFKGESLKEYWDFTHRIFDWADGGT 129
Query: 684 TEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSSR 743
NMILDDGGDAT LLHLGA+AE + S+++ SEEE LF +IK KL D WYS
Sbjct: 130 P---NMILDDGGDATLLLHLGARAEKDQSVIAKATSEEETYLFAAIKEKLAKDPSWYSRN 186
Query: 744 LKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRA 803
L I+GVTEETTTGV+RL +M ++G+L FPAINVNDSVTKSKFDNLYGCRESL+DGIKRA
Sbjct: 187 LAAIRGVTEETTTGVHRLYQMAQKGELRFPAINVNDSVTKSKFDNLYGCRESLVDGIKRA 246
Query: 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAK 863
TDVMIAGK+A++ GYGDVGKGSAQA+RALSAQVW+ EIDPICALQAAMEG+ VVTM+YA
Sbjct: 247 TDVMIAGKVAIVAGYGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRVVTMDYAA 306
Query: 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHI 923
++GDIFVTCTGNYHVITHDHM MKDQAIVCNIGHFDNEI++ ++KY+W+ IKPQVDH+
Sbjct: 307 EHGDIFVTCTGNYHVITHDHMAKMKDQAIVCNIGHFDNEIDIASIEKYEWDEIKPQVDHV 366
Query: 924 IFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFN--NTSNYPIGIYTL 981
FPDGKK+I+LA+GRLVNLGC TGHPSYVMSSSFANQT+AQIEL+ ++ YP+G+YTL
Sbjct: 367 KFPDGKKLIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWQERDSGKYPVGVYTL 426
Query: 982 PKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
PK LDEKVARLQL+KLN QL++LT+QQA YIGV K GPYK D+YRY
Sbjct: 427 PKHLDEKVARLQLRKLNAQLTELTEQQAAYIGVKKEGPYKADHYRY 472
|
May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q1CY84|SAHH_MYXXD Adenosylhomocysteinase OS=Myxococcus xanthus (strain DK 1622) GN=ahcY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/466 (72%), Positives = 398/466 (85%), Gaps = 2/466 (0%)
Query: 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIE 623
D+ IAD++L+ WGRKEI IAE+EM +L++IREE+ K++PLKGAR++GS+HMTIQTAVL+E
Sbjct: 11 DYAIADLSLADWGRKEIRIAESEMPALMAIREEYAKTQPLKGARVTGSLHMTIQTAVLVE 70
Query: 624 TLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDW-PGNS 682
TL+ LGAEVRW+SCNI+STQDHAAAA+ G PVFA KGES+ +YW+F HRIFD+ P S
Sbjct: 71 TLQALGAEVRWASCNIFSTQDHAAAALVQAGTPVFAHKGESLKEYWDFTHRIFDFGPAGS 130
Query: 683 NTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSS 742
+ E NMILDDGGDAT L+HLG +AE + S+L+NP SEEE L+ +IK KL D+ WY+
Sbjct: 131 DHEGPNMILDDGGDATLLMHLGKRAEKDASVLANPQSEEERELYAAIKAKLAEDATWYTR 190
Query: 743 RLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKR 802
+ +I GVTEETTTGV+RL+ M +G L F AINVNDSVTKSKFDNLYGCRESL+DGIKR
Sbjct: 191 KSAKILGVTEETTTGVHRLQEMSAKGTLLFRAINVNDSVTKSKFDNLYGCRESLVDGIKR 250
Query: 803 ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYA 862
ATDVM+AGKIAV+ GYGDVGKGSAQA+RALSAQVW+ EIDPICALQAAMEG+ VVTM+YA
Sbjct: 251 ATDVMVAGKIAVVAGYGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRVVTMDYA 310
Query: 863 KKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDH 922
DIFVT TGN VITHDHM MKDQAIVCNIGHFDNEIEV L+KYKWE IKPQVDH
Sbjct: 311 ADKADIFVTATGNKGVITHDHMAKMKDQAIVCNIGHFDNEIEVASLEKYKWEEIKPQVDH 370
Query: 923 IIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIG-IYTL 981
IIFPD K+IILLA+GRLVNLGCGTGHPSYVMSSSFANQT+AQIEL+++++NY +G +Y L
Sbjct: 371 IIFPDNKRIILLAKGRLVNLGCGTGHPSYVMSSSFANQTIAQIELYSHSANYEVGKVYVL 430
Query: 982 PKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
PK LDEKVARLQLKKLN QL++L+ +QA YIGV +GPYK D YRY
Sbjct: 431 PKHLDEKVARLQLKKLNAQLTELSQEQADYIGVKTSGPYKPDTYRY 476
|
May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. Myxococcus xanthus (strain DK 1622) (taxid: 246197) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1027 | ||||||
| 399019141 | 471 | adenosylhomocysteinase [Herbaspirillum s | 0.452 | 0.987 | 0.806 | 0.0 | |
| 48428750 | 480 | S-adenosylhomocysteine hydrolase [Collim | 0.448 | 0.960 | 0.797 | 0.0 | |
| 340789208 | 475 | adenosylhomocysteinase [Collimonas fungi | 0.448 | 0.970 | 0.797 | 0.0 | |
| 427399720 | 470 | adenosylhomocysteinase [Massilia timonae | 0.454 | 0.993 | 0.768 | 0.0 | |
| 134096108 | 479 | S-adenosyl-L-homocysteine hydrolase [Her | 0.454 | 0.974 | 0.782 | 0.0 | |
| 152980530 | 479 | S-adenosyl-L-homocysteine hydrolase [Jan | 0.454 | 0.974 | 0.778 | 0.0 | |
| 329904560 | 479 | Adenosylhomocysteinase [Oxalobacteraceae | 0.451 | 0.968 | 0.763 | 0.0 | |
| 237749247 | 470 | S-adenosylhomocysteine hydrolase [Oxalob | 0.454 | 0.993 | 0.759 | 0.0 | |
| 358635592 | 474 | S-adenosyl-L-homocysteine hydrolase [Azo | 0.457 | 0.991 | 0.764 | 0.0 | |
| 302879841 | 470 | adenosylhomocysteinase [Gallionella caps | 0.448 | 0.980 | 0.752 | 0.0 |
| >gi|399019141|ref|ZP_10721290.1| adenosylhomocysteinase [Herbaspirillum sp. CF444] gi|398098288|gb|EJL88575.1| adenosylhomocysteinase [Herbaspirillum sp. CF444] | Back alignment and taxonomy information |
|---|
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/466 (80%), Positives = 418/466 (89%), Gaps = 1/466 (0%)
Query: 562 SADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVL 621
+ D+VIADI L+QWG KEI+IAETEM L++IREEF ++PLKGARI+GSIHMTIQTAVL
Sbjct: 7 TKDYVIADIGLAQWGHKEIKIAETEMPGLMAIREEFAAAQPLKGARITGSIHMTIQTAVL 66
Query: 622 IETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGN 681
I+TL+ LGA+VRW+SCNIYSTQDHAAAAIA KG PVFAFKGES+ DYWEF HRIF+W G
Sbjct: 67 IQTLEALGAKVRWASCNIYSTQDHAAAAIADKGTPVFAFKGESLDDYWEFTHRIFEWQGG 126
Query: 682 SNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYS 741
N EQANMILDDGGDAT LLHLG +AE + S+L+NP SEEE+CLF SIK +L + WYS
Sbjct: 127 EN-EQANMILDDGGDATLLLHLGTRAEKDASVLNNPTSEEEICLFNSIKKRLASHTNWYS 185
Query: 742 SRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIK 801
SRL QIKGVTEETTTGV+RL +M K+GKL+FPAINVNDSVTKSKFDNLYGCRESL+DGIK
Sbjct: 186 SRLAQIKGVTEETTTGVHRLYQMHKDGKLAFPAINVNDSVTKSKFDNLYGCRESLVDGIK 245
Query: 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEY 861
RATDVMIAGK+AVI GYGDVGKGSAQAMRALSAQVW+ EIDPICALQAAMEG+ VVTM+Y
Sbjct: 246 RATDVMIAGKVAVIAGYGDVGKGSAQAMRALSAQVWVTEIDPICALQAAMEGYRVVTMDY 305
Query: 862 AKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVD 921
A ++GDIFVTCTGNYHVITHDHM+ MKDQAIVCNIGHFDNEIEV LK+Y WENIKPQVD
Sbjct: 306 AAEHGDIFVTCTGNYHVITHDHMKKMKDQAIVCNIGHFDNEIEVAALKQYTWENIKPQVD 365
Query: 922 HIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIYTL 981
HIIFPDGK+IILLAEGRLVNLGCGTGHPSYVMSSSFANQT+AQIELF NT NYP+G+YTL
Sbjct: 366 HIIFPDGKRIILLAEGRLVNLGCGTGHPSYVMSSSFANQTIAQIELFVNTKNYPVGVYTL 425
Query: 982 PKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
PK LDEKVARLQLKKLN QLS LT +QA YIGV +GPYK D+YRY
Sbjct: 426 PKHLDEKVARLQLKKLNAQLSTLTAEQASYIGVKTDGPYKPDHYRY 471
|
Source: Herbaspirillum sp. CF444 Species: Herbaspirillum sp. CF444 Genus: Herbaspirillum Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|48428750|gb|AAT42399.1| S-adenosylhomocysteine hydrolase [Collimonas fungivorans Ter331] | Back alignment and taxonomy information |
|---|
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/464 (79%), Positives = 416/464 (89%), Gaps = 3/464 (0%)
Query: 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIE 623
D+V+ADI+LS WG KEI+IAETEM L++IREEF ++PLKGARI+GSIHMTIQTAVLI+
Sbjct: 20 DYVVADISLSAWGDKEIKIAETEMPGLMAIREEFAAAQPLKGARITGSIHMTIQTAVLIQ 79
Query: 624 TLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSN 683
TL+ LGA+VRW+SCNIYSTQDHAAAAIA+ G PVFAFKGES+ DYW+F HRIF+WPG
Sbjct: 80 TLEALGAKVRWASCNIYSTQDHAAAAIAAAGTPVFAFKGESLDDYWDFTHRIFEWPGE-- 137
Query: 684 TEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSSR 743
+QANMILDDGGDAT LLHLG +AE +IS+L+NP SEEE+CLF +IK KL WYS+R
Sbjct: 138 -QQANMILDDGGDATLLLHLGTRAEKDISVLNNPGSEEEICLFNAIKKKLATAPNWYSTR 196
Query: 744 LKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRA 803
L QIKGVTEETTTGV+RL +M KEGKL+FPAINVNDSVTKSKFDNLYGCRESL+DGIKRA
Sbjct: 197 LAQIKGVTEETTTGVHRLYQMHKEGKLAFPAINVNDSVTKSKFDNLYGCRESLVDGIKRA 256
Query: 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAK 863
TDVMIAGK+AVI GYGDVGKGSAQAMRALSAQVW+ E+DPICALQAAMEG+ VVTMEYA
Sbjct: 257 TDVMIAGKVAVIAGYGDVGKGSAQAMRALSAQVWVTEVDPICALQAAMEGYRVVTMEYAA 316
Query: 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHI 923
++GDIFVTCTGNYHVITH HM+ MKDQAIVCNIGHFDNEIEV LK+Y WENIKPQVDHI
Sbjct: 317 EHGDIFVTCTGNYHVITHAHMQKMKDQAIVCNIGHFDNEIEVAALKQYTWENIKPQVDHI 376
Query: 924 IFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIYTLPK 983
IFPDGK+IILLAEGRLVNLGCGTGHPSYVMSSSFANQT+AQIELF NT YP+G+YTLPK
Sbjct: 377 IFPDGKRIILLAEGRLVNLGCGTGHPSYVMSSSFANQTIAQIELFVNTKAYPVGVYTLPK 436
Query: 984 ILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
LDEKVARLQLKKLN QLS LT++QA YIGV + GPYK ++YRY
Sbjct: 437 HLDEKVARLQLKKLNAQLSVLTEEQAAYIGVKQTGPYKPEHYRY 480
|
Source: Collimonas fungivorans Ter331 Species: Collimonas fungivorans Genus: Collimonas Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|340789208|ref|YP_004754673.1| adenosylhomocysteinase [Collimonas fungivorans Ter331] gi|340554475|gb|AEK63850.1| Adenosylhomocysteinase [Collimonas fungivorans Ter331] | Back alignment and taxonomy information |
|---|
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/464 (79%), Positives = 416/464 (89%), Gaps = 3/464 (0%)
Query: 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIE 623
D+V+ADI+LS WG KEI+IAETEM L++IREEF ++PLKGARI+GSIHMTIQTAVLI+
Sbjct: 15 DYVVADISLSAWGDKEIKIAETEMPGLMAIREEFAAAQPLKGARITGSIHMTIQTAVLIQ 74
Query: 624 TLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSN 683
TL+ LGA+VRW+SCNIYSTQDHAAAAIA+ G PVFAFKGES+ DYW+F HRIF+WPG
Sbjct: 75 TLEALGAKVRWASCNIYSTQDHAAAAIAAAGTPVFAFKGESLDDYWDFTHRIFEWPGE-- 132
Query: 684 TEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSSR 743
+QANMILDDGGDAT LLHLG +AE +IS+L+NP SEEE+CLF +IK KL WYS+R
Sbjct: 133 -QQANMILDDGGDATLLLHLGTRAEKDISVLNNPGSEEEICLFNAIKKKLATAPNWYSTR 191
Query: 744 LKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRA 803
L QIKGVTEETTTGV+RL +M KEGKL+FPAINVNDSVTKSKFDNLYGCRESL+DGIKRA
Sbjct: 192 LAQIKGVTEETTTGVHRLYQMHKEGKLAFPAINVNDSVTKSKFDNLYGCRESLVDGIKRA 251
Query: 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAK 863
TDVMIAGK+AVI GYGDVGKGSAQAMRALSAQVW+ E+DPICALQAAMEG+ VVTMEYA
Sbjct: 252 TDVMIAGKVAVIAGYGDVGKGSAQAMRALSAQVWVTEVDPICALQAAMEGYRVVTMEYAA 311
Query: 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHI 923
++GDIFVTCTGNYHVITH HM+ MKDQAIVCNIGHFDNEIEV LK+Y WENIKPQVDHI
Sbjct: 312 EHGDIFVTCTGNYHVITHAHMQKMKDQAIVCNIGHFDNEIEVAALKQYTWENIKPQVDHI 371
Query: 924 IFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIYTLPK 983
IFPDGK+IILLAEGRLVNLGCGTGHPSYVMSSSFANQT+AQIELF NT YP+G+YTLPK
Sbjct: 372 IFPDGKRIILLAEGRLVNLGCGTGHPSYVMSSSFANQTIAQIELFVNTKAYPVGVYTLPK 431
Query: 984 ILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
LDEKVARLQLKKLN QLS LT++QA YIGV + GPYK ++YRY
Sbjct: 432 HLDEKVARLQLKKLNAQLSVLTEEQAAYIGVKQTGPYKPEHYRY 475
|
Source: Collimonas fungivorans Ter331 Species: Collimonas fungivorans Genus: Collimonas Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|427399720|ref|ZP_18890958.1| adenosylhomocysteinase [Massilia timonae CCUG 45783] gi|425721482|gb|EKU84395.1| adenosylhomocysteinase [Massilia timonae CCUG 45783] | Back alignment and taxonomy information |
|---|
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/470 (76%), Positives = 416/470 (88%), Gaps = 3/470 (0%)
Query: 558 VLKNSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQ 617
VLK+S D+++ADI+L+ WG KEI IAETEM L++IREE+ ++PLKGARI+GS+HMTIQ
Sbjct: 4 VLKDSQDYIVADISLASWGEKEIRIAETEMPGLMAIREEYAATQPLKGARIAGSLHMTIQ 63
Query: 618 TAVLIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFD 677
TAVLI TL+ LGA VRW+SCNIYSTQDHAAAAIAS G PVFA KGE++ +YWE+ HRIF+
Sbjct: 64 TAVLIRTLEALGATVRWASCNIYSTQDHAAAAIASVGTPVFAIKGETLDEYWEYTHRIFE 123
Query: 678 WPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDS 737
WPG+++ ANMILDDGGDAT LLHLG +AE +IS+L P SEEE+CLF +IK +L D
Sbjct: 124 WPGDNH---ANMILDDGGDATLLLHLGVRAEKDISVLDKPGSEEEICLFNAIKGRLARDP 180
Query: 738 KWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLI 797
WYS RL +IKGVTEETTTGV+RL +M +EGKL+FPAINVNDSVTKSKFDNLYGCRESL+
Sbjct: 181 SWYSKRLPEIKGVTEETTTGVHRLYQMHQEGKLAFPAINVNDSVTKSKFDNLYGCRESLV 240
Query: 798 DGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV 857
DGIKRATDVM+AGKIAVI GYGDVGKGSAQAMRALSAQVW+ EIDPICALQAAMEG+ VV
Sbjct: 241 DGIKRATDVMVAGKIAVIAGYGDVGKGSAQAMRALSAQVWVTEIDPICALQAAMEGYRVV 300
Query: 858 TMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIK 917
TM+YA ++GDIFVTCTGNYHVIT HM MKDQAIVCNIGHFDNEIEV LKKY+W+NIK
Sbjct: 301 TMDYAAEHGDIFVTCTGNYHVITEQHMLKMKDQAIVCNIGHFDNEIEVAALKKYQWDNIK 360
Query: 918 PQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIG 977
PQVDH+IFPDGK+IILLAEGRLVNLGCGTGHPSYVMSSSFANQT+AQIELF NT+ YP+G
Sbjct: 361 PQVDHVIFPDGKRIILLAEGRLVNLGCGTGHPSYVMSSSFANQTIAQIELFMNTAQYPVG 420
Query: 978 IYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
+YTLPK LDEKVARLQLKKLN QL+ LT++QA YI VS+ GPYK ++YRY
Sbjct: 421 VYTLPKKLDEKVARLQLKKLNAQLTTLTEEQANYISVSQEGPYKPEHYRY 470
|
Source: Massilia timonae CCUG 45783 Species: Massilia timonae Genus: Massilia Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|134096108|ref|YP_001101183.1| S-adenosyl-L-homocysteine hydrolase [Herminiimonas arsenicoxydans] gi|226695335|sp|A4G975.1|SAHH_HERAR RecName: Full=Adenosylhomocysteinase; AltName: Full=S-adenosyl-L-homocysteine hydrolase; Short=AdoHcyase gi|133740011|emb|CAL63062.1| Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) [Herminiimonas arsenicoxydans] | Back alignment and taxonomy information |
|---|
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/469 (78%), Positives = 414/469 (88%), Gaps = 2/469 (0%)
Query: 561 NSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAV 620
N +D+VIAD++LS WG KEI IAETEM L++IREEF ++PLKGARI+GSIHMTIQTAV
Sbjct: 11 NFSDYVIADLSLSVWGDKEIRIAETEMPGLMAIREEFAAAQPLKGARITGSIHMTIQTAV 70
Query: 621 LIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPG 680
LI+TL+ LGA+VRW+SCNIYSTQDHAAAAIA+ G PVFA KGE++ DYWE+ HRIF+WP
Sbjct: 71 LIQTLEALGAKVRWASCNIYSTQDHAAAAIAAAGTPVFAVKGETLDDYWEYTHRIFEWPN 130
Query: 681 NSNTEQ--ANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSK 738
+ +NMILDDGGDAT LLHLG +AE + S+L+NP SEEE+CLF SIK L +D+
Sbjct: 131 DDKGAPVYSNMILDDGGDATLLLHLGTRAEKDASVLNNPGSEEEICLFNSIKKHLAVDAT 190
Query: 739 WYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLID 798
WYS RL QI GVTEETTTGV+RL +M KEGKL+FPAINVNDSVTKSKFDNLYGCRESL+D
Sbjct: 191 WYSKRLPQILGVTEETTTGVHRLYQMHKEGKLAFPAINVNDSVTKSKFDNLYGCRESLVD 250
Query: 799 GIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT 858
GIKRATDVMIAGK+AVI GYGDVGKGSAQAMRALSAQVW+ EIDPICALQAAMEG+ VVT
Sbjct: 251 GIKRATDVMIAGKVAVIAGYGDVGKGSAQAMRALSAQVWVTEIDPICALQAAMEGYRVVT 310
Query: 859 MEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKP 918
M+YA ++GDIFVTCTGNYHVITHDHM MKDQAIVCNIGHFDNEIEV LK+Y WENIKP
Sbjct: 311 MDYAAEHGDIFVTCTGNYHVITHDHMAKMKDQAIVCNIGHFDNEIEVAALKQYTWENIKP 370
Query: 919 QVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGI 978
QVDHIIFPDGK+IILLAEGRLVNLGCGTGHPSYVMSSSFANQT+AQIEL+ NT NYP+G+
Sbjct: 371 QVDHIIFPDGKRIILLAEGRLVNLGCGTGHPSYVMSSSFANQTIAQIELYANTKNYPVGV 430
Query: 979 YTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
YTLPK LDEKVARLQLKKLN QL+ LTD+QA YIGV K GPYK ++YRY
Sbjct: 431 YTLPKHLDEKVARLQLKKLNSQLTTLTDEQANYIGVQKAGPYKPEHYRY 479
|
Source: Herminiimonas arsenicoxydans Species: Herminiimonas arsenicoxydans Genus: Herminiimonas Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|152980530|ref|YP_001354886.1| S-adenosyl-L-homocysteine hydrolase [Janthinobacterium sp. Marseille] gi|226695336|sp|A6T2Y9.1|SAHH_JANMA RecName: Full=Adenosylhomocysteinase; AltName: Full=S-adenosyl-L-homocysteine hydrolase; Short=AdoHcyase gi|151280607|gb|ABR89017.1| adenosylhomocysteinase [Janthinobacterium sp. Marseille] | Back alignment and taxonomy information |
|---|
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/469 (77%), Positives = 414/469 (88%), Gaps = 2/469 (0%)
Query: 561 NSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAV 620
N +D+VIAD++LS WG KEI IAETEM L++IREEF ++PLKGARI+GSIHMTIQTAV
Sbjct: 11 NFSDYVIADLSLSAWGDKEIRIAETEMPGLMAIREEFAAAQPLKGARITGSIHMTIQTAV 70
Query: 621 LIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPG 680
LI+TL+ LGA+VRW+SCNIYSTQDHAAAAIA+ G PVFA KGE++ DYWE+ HRIF+WP
Sbjct: 71 LIQTLEALGAKVRWASCNIYSTQDHAAAAIAAAGTPVFAVKGETLDDYWEYTHRIFEWPN 130
Query: 681 NSNTEQ--ANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSK 738
+ +NMILDDGGDAT LLHLG +AE + S+L+NP SEEE+CLF SIK L +D+
Sbjct: 131 DDKGAPVYSNMILDDGGDATLLLHLGTRAEKDASVLNNPGSEEEICLFNSIKKHLAVDAT 190
Query: 739 WYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLID 798
WYS RL QI GVTEETTTGV+RL +M KEGKL+FPAINVNDSVTKSKFDNLYGCRESL+D
Sbjct: 191 WYSKRLPQILGVTEETTTGVHRLYQMHKEGKLAFPAINVNDSVTKSKFDNLYGCRESLVD 250
Query: 799 GIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT 858
GIKRATDVMIAGK+AVI GYGDVGKGSAQAMRALSAQVW+ EIDPICALQAAMEG+ VVT
Sbjct: 251 GIKRATDVMIAGKVAVIAGYGDVGKGSAQAMRALSAQVWVTEIDPICALQAAMEGYRVVT 310
Query: 859 MEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKP 918
MEYA ++GDIFVTCTGNYHVITH+HM+ MKDQAIVCNIGHFDNEIEV LK+Y WENIKP
Sbjct: 311 MEYAAEHGDIFVTCTGNYHVITHEHMKKMKDQAIVCNIGHFDNEIEVAALKQYTWENIKP 370
Query: 919 QVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGI 978
QVDHIIFPDGK+IILLAEGRLVNLGCGTGHPSYVMSSSFANQT+AQIEL+ NT NYP+G+
Sbjct: 371 QVDHIIFPDGKRIILLAEGRLVNLGCGTGHPSYVMSSSFANQTIAQIELYANTKNYPVGV 430
Query: 979 YTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
YTLPK LDEKVARLQLKKLN QL+ LT +QA YIGV + GPYK ++YRY
Sbjct: 431 YTLPKHLDEKVARLQLKKLNAQLTTLTTEQANYIGVQQTGPYKPEHYRY 479
|
Source: Janthinobacterium sp. Marseille Species: Janthinobacterium sp. Marseille Genus: Janthinobacterium Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|329904560|ref|ZP_08273866.1| Adenosylhomocysteinase [Oxalobacteraceae bacterium IMCC9480] gi|327547920|gb|EGF32670.1| Adenosylhomocysteinase [Oxalobacteraceae bacterium IMCC9480] | Back alignment and taxonomy information |
|---|
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/465 (76%), Positives = 413/465 (88%), Gaps = 1/465 (0%)
Query: 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIE 623
D+ +AD++L++WGRKEI IAETEM L++IR+EF ++PLKGARI+GSIHMTIQTAVLI+
Sbjct: 15 DYFVADLSLAEWGRKEIRIAETEMPGLMAIRKEFAAAQPLKGARITGSIHMTIQTAVLIQ 74
Query: 624 TLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSN 683
TL+ LGA+VRW+SCNIYSTQDHAAAAIA+ G PVFAFKGES+ +YWEF HRIF+WP N++
Sbjct: 75 TLEALGAQVRWASCNIYSTQDHAAAAIAADGTPVFAFKGESLDEYWEFTHRIFEWPANAD 134
Query: 684 TEQ-ANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSS 742
EQ ANMILDDGGDAT LLHLG +AE + S+L NP SEEEVCL+ SIK +L WYS+
Sbjct: 135 GEQHANMILDDGGDATLLLHLGTRAEQDASVLDNPTSEEEVCLYASIKKRLASHQGWYST 194
Query: 743 RLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKR 802
RL Q+KGVTEETTTGV+RL +MFK+GKL+FPAINVNDSVTK+KFDNLYGCRESL+DGIKR
Sbjct: 195 RLAQVKGVTEETTTGVHRLYQMFKDGKLAFPAINVNDSVTKAKFDNLYGCRESLVDGIKR 254
Query: 803 ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYA 862
ATDVMIAGK+AV+ GYGDVGKGSAQA+RALSAQVW+ EIDPICALQAAMEG+ VVTM+YA
Sbjct: 255 ATDVMIAGKVAVVAGYGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRVVTMDYA 314
Query: 863 KKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDH 922
++ DIFVT TGNYHVITH+HM MKDQAIVCNIGHFDNEIEV LK+Y WENIKPQVDH
Sbjct: 315 AEHADIFVTATGNYHVITHEHMAKMKDQAIVCNIGHFDNEIEVAALKQYTWENIKPQVDH 374
Query: 923 IIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIYTLP 982
+IFP+GK+IILLAEGRLVNLGCGTGHPSYVMSSSFANQ +AQ+ELF NT YP+G+YTLP
Sbjct: 375 VIFPNGKRIILLAEGRLVNLGCGTGHPSYVMSSSFANQVIAQMELFCNTDKYPVGVYTLP 434
Query: 983 KILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
K LDEKVARLQL+KLN QL++LT +QA YIGV + GPYK + YRY
Sbjct: 435 KHLDEKVARLQLQKLNAQLTELTPEQASYIGVQQVGPYKPEQYRY 479
|
Source: Oxalobacteraceae bacterium IMCC9480 Species: Oxalobacteraceae bacterium IMCC9480 Genus: Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|237749247|ref|ZP_04579727.1| S-adenosylhomocysteine hydrolase [Oxalobacter formigenes OXCC13] gi|229380609|gb|EEO30700.1| S-adenosylhomocysteine hydrolase [Oxalobacter formigenes OXCC13] | Back alignment and taxonomy information |
|---|
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/470 (75%), Positives = 405/470 (86%), Gaps = 3/470 (0%)
Query: 558 VLKNSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQ 617
V K DF IAD +L+ WG KEI IAETEM L++IREE+ SKPL GARISGS+HMTIQ
Sbjct: 4 VSKTEQDFYIADPDLTAWGNKEIRIAETEMPGLMAIREEYAASKPLSGARISGSLHMTIQ 63
Query: 618 TAVLIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFD 677
TAVLI+TL+ LGA+VRW+SCNIYSTQDHAAAAIAS G PVFAFKGES+ DYWEF HRIF+
Sbjct: 64 TAVLIQTLEALGAKVRWASCNIYSTQDHAAAAIASNGTPVFAFKGESLDDYWEFTHRIFE 123
Query: 678 WPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDS 737
WP +NMILDDGGDAT LLHLG++AE + ++L NP SEEEVCLF +IK LK D
Sbjct: 124 WPDGG---YSNMILDDGGDATLLLHLGSRAEKDATVLDNPGSEEEVCLFNAIKRHLKTDP 180
Query: 738 KWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLI 797
WYS R+K+IKGVTEETTTGV+RL +M +EGKL FPAINVNDSVTKSKFDNLYGCRESL+
Sbjct: 181 NWYSKRIKEIKGVTEETTTGVHRLYQMHEEGKLKFPAINVNDSVTKSKFDNLYGCRESLV 240
Query: 798 DGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV 857
DGIKRATDVMIAGK+AV+ GYGDVGKG AQA++ALSAQVW+ E+DPICALQAAMEG+ VV
Sbjct: 241 DGIKRATDVMIAGKVAVVCGYGDVGKGCAQALKALSAQVWVTEVDPICALQAAMEGYRVV 300
Query: 858 TMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIK 917
TM+YA + DIFVTCTGNYHVITHDHM MKDQAIVCNIGHFDNEI+V +KKY W+NIK
Sbjct: 301 TMDYAAEMADIFVTCTGNYHVITHDHMVKMKDQAIVCNIGHFDNEIDVASMKKYTWDNIK 360
Query: 918 PQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIG 977
PQVDHII P+G +IILLAEGRLVNLGCGTGHPSYVMSSSFANQT+AQIELF NT YP+G
Sbjct: 361 PQVDHIILPNGNRIILLAEGRLVNLGCGTGHPSYVMSSSFANQTIAQIELFTNTEAYPVG 420
Query: 978 IYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
+YTLPK LDEKVARLQLKKLN L++L+D+QA YIGV K GPYK ++YRY
Sbjct: 421 VYTLPKHLDEKVARLQLKKLNAVLTELSDEQAAYIGVKKEGPYKPNHYRY 470
|
Source: Oxalobacter formigenes OXCC13 Species: Oxalobacter formigenes Genus: Oxalobacter Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|358635592|dbj|BAL22889.1| S-adenosyl-L-homocysteine hydrolase [Azoarcus sp. KH32C] | Back alignment and taxonomy information |
|---|
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/471 (76%), Positives = 411/471 (87%), Gaps = 1/471 (0%)
Query: 558 VLKNSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQ 617
V +N DFV+AD+ L+ WGRKEI IAETEM L++IREEF S+PLKGARI+GS+HMTIQ
Sbjct: 4 VAENFTDFVVADLKLADWGRKEIRIAETEMPGLMAIREEFAASQPLKGARITGSLHMTIQ 63
Query: 618 TAVLIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFD 677
TAVLIETL LGAEVRW+SCNI+STQDHAAAAIA++GIPVFA KGES++DYW++ HRIF+
Sbjct: 64 TAVLIETLTALGAEVRWASCNIFSTQDHAAAAIAAQGIPVFAVKGESLADYWDYTHRIFE 123
Query: 678 WPGNSNTE-QANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKID 736
WP N N +NMILDDGGDAT LLHLGA+AE +IS+L+ P SEEE LF +I+ KL D
Sbjct: 124 WPANGNEGIYSNMILDDGGDATLLLHLGAKAEQDISVLAKPGSEEETILFAAIRAKLATD 183
Query: 737 SKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESL 796
WYS+RL QIKGVTEETTTGV+RL +M G L FPAINVNDSVTKSKFDNLYGCRESL
Sbjct: 184 PTWYSTRLGQIKGVTEETTTGVHRLYQMHARGDLKFPAINVNDSVTKSKFDNLYGCRESL 243
Query: 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV 856
+DGIKRATDVMIAGK+AV+ GYGDVGKGSAQA+RALSAQVW+ EIDPICALQAAMEG+ V
Sbjct: 244 VDGIKRATDVMIAGKVAVVCGYGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRV 303
Query: 857 VTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENI 916
VTMEYA + DIFVT TGN+HVITHDHM MKDQAIVCNIGHFDNEI+V L+KY+WE I
Sbjct: 304 VTMEYAAAHADIFVTTTGNFHVITHDHMVKMKDQAIVCNIGHFDNEIDVASLEKYQWEEI 363
Query: 917 KPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPI 976
KPQVDH+IFPDGK+IILLA+GRLVNLGC TGHPSYVMSSSFANQT+AQIELF T++YP+
Sbjct: 364 KPQVDHVIFPDGKRIILLAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELFTRTADYPV 423
Query: 977 GIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
G+YTLPK LDEKVARLQL+KLNVQL++LTDQQA YIGV K GPYK +YRY
Sbjct: 424 GVYTLPKHLDEKVARLQLRKLNVQLTELTDQQAAYIGVPKEGPYKSAHYRY 474
|
Source: Azoarcus sp. KH32C Species: Azoarcus sp. KH32C Genus: Azoarcus Family: Rhodocyclaceae Order: Rhodocyclales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|302879841|ref|YP_003848405.1| adenosylhomocysteinase [Gallionella capsiferriformans ES-2] gi|302582630|gb|ADL56641.1| adenosylhomocysteinase [Gallionella capsiferriformans ES-2] | Back alignment and taxonomy information |
|---|
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/464 (75%), Positives = 407/464 (87%), Gaps = 3/464 (0%)
Query: 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIE 623
D+++AD++L+ WGRKE+ IAE EM L++IR E+ S+PLKGARI+GS+HMTIQT VLIE
Sbjct: 10 DYIVADMSLAAWGRKELAIAEVEMPGLMAIRNEYAASQPLKGARITGSLHMTIQTGVLIE 69
Query: 624 TLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSN 683
TL LGAEVRW+SCNIYSTQDHAAAAI + G+PVFA KGE++++YW++ HRIF+W
Sbjct: 70 TLTALGAEVRWASCNIYSTQDHAAAAIVATGVPVFAVKGETLTEYWDYTHRIFEWKDGG- 128
Query: 684 TEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSSR 743
+NMILDDGGDAT LLHLGA+AE + S+L+NP SEEE+CLF SIK KL +D WYS+R
Sbjct: 129 --LSNMILDDGGDATLLLHLGARAEKDASLLNNPGSEEEICLFNSIKAKLAVDGTWYSTR 186
Query: 744 LKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRA 803
L IKGVTEETTTGV+RL +M + G+L FPAINVNDSVTKSKFDNLYGCRESL+D IKRA
Sbjct: 187 LAAIKGVTEETTTGVHRLYQMHERGELKFPAINVNDSVTKSKFDNLYGCRESLVDAIKRA 246
Query: 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAK 863
TDVMIAGKIAVI+GYGDVGKGSAQAMRALSAQVW+ EIDPICALQAAMEG+ VVTM+YA
Sbjct: 247 TDVMIAGKIAVIVGYGDVGKGSAQAMRALSAQVWVTEIDPICALQAAMEGYRVVTMDYAC 306
Query: 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHI 923
++GDIFVT TGNYHVITHDHM MK+ AIV NIGHFDNEI+V LK+Y+WENIKPQVDH+
Sbjct: 307 EHGDIFVTTTGNYHVITHDHMAKMKNNAIVSNIGHFDNEIDVASLKQYQWENIKPQVDHV 366
Query: 924 IFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIYTLPK 983
IFPDGK+I+LLAEGRLVNLGCGTGHPSYVMSSSFANQT+AQIEL+ TS+YP+G+YTLPK
Sbjct: 367 IFPDGKRILLLAEGRLVNLGCGTGHPSYVMSSSFANQTIAQIELYTRTSDYPVGVYTLPK 426
Query: 984 ILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
LDEKVARLQL LN QLS+LTDQQA YIGV+KNGPYK ++YRY
Sbjct: 427 HLDEKVARLQLTTLNAQLSELTDQQAAYIGVAKNGPYKANHYRY 470
|
Source: Gallionella capsiferriformans ES-2 Species: Gallionella capsiferriformans Genus: Gallionella Family: Gallionellaceae Order: Gallionellales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1027 | ||||||
| TIGR_CMR|GSU_1875 | 475 | GSU_1875 "adenosylhomocysteina | 0.449 | 0.972 | 0.726 | 1.6e-182 | |
| TIGR_CMR|SPO_3861 | 462 | SPO_3861 "adenosylhomocysteina | 0.448 | 0.997 | 0.598 | 7.3e-146 | |
| TAIR|locus:2095193 | 485 | SAHH2 "S-adenosyl-l-homocystei | 0.454 | 0.962 | 0.566 | 3.4e-132 | |
| TAIR|locus:2129256 | 485 | HOG1 "HOMOLOGY-DEPENDENT GENE | 0.454 | 0.962 | 0.559 | 1.2e-131 | |
| UNIPROTKB|P60176 | 495 | ahcY "Adenosylhomocysteinase" | 0.451 | 0.937 | 0.553 | 3.2e-129 | |
| TIGR_CMR|GSU_1880 | 389 | GSU_1880 "S-adenosylmethionine | 0.366 | 0.966 | 0.596 | 3.4e-125 | |
| TIGR_CMR|SO_0929 | 383 | SO_0929 "S-adenosylmethionine | 0.362 | 0.971 | 0.625 | 3.6e-121 | |
| TIGR_CMR|CBU_2030 | 393 | CBU_2030 "S-adenosylmethionine | 0.370 | 0.969 | 0.606 | 4.6e-121 | |
| UNIPROTKB|P0A817 | 384 | metK "methionine adenosyltrans | 0.362 | 0.968 | 0.620 | 7.4e-121 | |
| UNIPROTKB|P0A819 | 384 | metK "S-adenosylmethionine syn | 0.362 | 0.968 | 0.620 | 7.4e-121 |
| TIGR_CMR|GSU_1875 GSU_1875 "adenosylhomocysteinase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 1771 (628.5 bits), Expect = 1.6e-182, P = 1.6e-182
Identities = 338/465 (72%), Positives = 388/465 (83%)
Query: 563 ADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLI 622
+D+ I+DI+L+ WGRKE+ IAETEM L++IREE+ ++PL+GARI+GS+HMTIQTA+LI
Sbjct: 14 SDYCISDISLAAWGRKEMIIAETEMPGLMAIREEYAATRPLQGARIAGSLHMTIQTAMLI 73
Query: 623 ETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNS 682
ETL LGAEVRW+SCNI+STQDHAAAAIA+ GIPVFA+KGES+ +YWEF HRIF+W
Sbjct: 74 ETLVALGAEVRWASCNIFSTQDHAAAAIAAAGIPVFAYKGESLEEYWEFTHRIFEWHDGG 133
Query: 683 NTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSS 742
NMILDDGGDAT LLHLG+ AE + S+++NP EEE LF SIK +L WYS
Sbjct: 134 TP---NMILDDGGDATLLLHLGSDAEKDPSVIANPTCEEEQYLFASIKKRLAEKPGWYSK 190
Query: 743 RLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKR 802
IKGVTEETTTGV+RL +M ++GKL FPAINVNDSVTKSKFDN+YGCRESL+DGIKR
Sbjct: 191 TAAAIKGVTEETTTGVHRLYQMHEKGKLKFPAINVNDSVTKSKFDNIYGCRESLVDGIKR 250
Query: 803 ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYA 862
ATDVMIAGK+AVI GYG+VGKG AQAMR L AQVW+ EIDPICALQAAMEG+ VVTMEYA
Sbjct: 251 ATDVMIAGKVAVICGYGEVGKGCAQAMRGLQAQVWVTEIDPICALQAAMEGYRVVTMEYA 310
Query: 863 KKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDH 922
DIFVT TGN +VITHDHM+ M+ AIVCNIGHFDNEIEV LK+Y+WENIKPQVDH
Sbjct: 311 ADKADIFVTTTGNINVITHDHMKAMRHNAIVCNIGHFDNEIEVAALKQYQWENIKPQVDH 370
Query: 923 IIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIYTLP 982
IIFPD K+IILLAEGRLVNLGC TGHPSYVMSSSFANQTLAQIELF N YP+G+Y LP
Sbjct: 371 IIFPDSKRIILLAEGRLVNLGCATGHPSYVMSSSFANQTLAQIELFCNPGKYPVGVYMLP 430
Query: 983 KILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
K LDEKVARLQLK L L++LTD+QA YIGV KNGPYK +YRY
Sbjct: 431 KELDEKVARLQLKTLGAMLTELTDEQAAYIGVPKNGPYKSAHYRY 475
|
|
| TIGR_CMR|SPO_3861 SPO_3861 "adenosylhomocysteinase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 1425 (506.7 bits), Expect = 7.3e-146, P = 7.3e-146
Identities = 279/466 (59%), Positives = 354/466 (75%)
Query: 562 SADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVL 621
+ D+++ DI+L+ +GRKE++IAETEM L+++REE+ K++PLKGARI GS+HMTIQTAVL
Sbjct: 2 AGDYIVKDISLAGFGRKELDIAETEMPGLMTLREEYGKAQPLKGARIVGSLHMTIQTAVL 61
Query: 622 IETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGN 681
IETL LGA+VRW+SCNI+STQDHAAAAIA+ GIPVFA KG+++ ++W++ + F +
Sbjct: 62 IETLVALGADVRWASCNIFSTQDHAAAAIAAAGIPVFAIKGQTLEEHWDYLDKSFLFD-- 119
Query: 682 SNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYS 741
E NMILDDGGDAT + LGA+AE I+ P SEEE + K I ++ W++
Sbjct: 120 ---EGPNMILDDGGDATLYILLGARAEAGEDIIPVPGSEEEEVIKKQIAKRMAASPGWFT 176
Query: 742 SRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIK 801
QI+GV+EETTTGV RL ++ K+G L FPAINVNDSVTKSKFDN YGC+ESL+DGI+
Sbjct: 177 KMRDQIQGVSEETTTGVNRLYQLVKDGHLPFPAINVNDSVTKSKFDNKYGCKESLVDGIR 236
Query: 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEY 861
RATD M+AGK+AV+ GYGDVGKGSA ++R A+V + E+DPICALQAAM+GF V T+E
Sbjct: 237 RATDTMMAGKVAVVCGYGDVGKGSAASLRGAGARVKVTEVDPICALQAAMDGFEVTTLED 296
Query: 862 AKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVD 921
DIF+T TGN VI +HMR+MK+ AIV NIGHFDNEI+V LK +KW NIK QVD
Sbjct: 297 EVASADIFITTTGNKDVIRIEHMREMKNMAIVGNIGHFDNEIQVAALKNHKWTNIKEQVD 356
Query: 922 HIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIYTL 981
I P G KIILL+EGRL+NLG TGHPS+VMS+SF NQ LAQIELF Y +Y L
Sbjct: 357 MIEMPSGNKIILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELFTKGDQYENKVYIL 416
Query: 982 PKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
PK LDEKVARL L ++ V+L++L+ QA YIGV GP+K ++YRY
Sbjct: 417 PKHLDEKVARLHLARIGVKLTQLSPDQASYIGVKPEGPFKPEHYRY 462
|
|
| TAIR|locus:2095193 SAHH2 "S-adenosyl-l-homocysteine (SAH) hydrolase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1296 (461.3 bits), Expect = 3.4e-132, P = 3.4e-132
Identities = 274/484 (56%), Positives = 337/484 (69%)
Query: 557 EVLKNSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTI 616
E + ++ + D++ + +GR EIE+AE EM L+S EF S+PLKGARI+GS+HMTI
Sbjct: 6 EKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLVSCVTEFGPSQPLKGARITGSLHMTI 65
Query: 617 QTAVLIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIF 676
QTAVLIETL LGAEVRW SCNI+STQDHAAAAIA VFA+KGE++ +YW R
Sbjct: 66 QTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERAL 125
Query: 677 DW-PGNSNTEQANMILDDGGDATFLLHLGAQAENNIS---ILSNPCSEE--EVCLFKSI- 729
DW PG ++I+DDGGDAT L+H G +AE + +P S + E + SI
Sbjct: 126 DWGPGGG----PDLIVDDGGDATLLIHEGVKAEEIFAKNGTFPDPTSTDNPEFQIVLSII 181
Query: 730 KNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNL 789
K+ L++D K Y +++ GV+EETTTGV RL +M + G L FPAINVNDSVTKSKFDNL
Sbjct: 182 KDGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQETGALLFPAINVNDSVTKSKFDNL 241
Query: 790 YGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA 849
YGCR SL DG+ RATDVMIAGK+AVI GYGDVGKG A AM+ A+V + EIDPICALQA
Sbjct: 242 YGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQA 301
Query: 850 AMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909
MEG V+T+E DIF T TGN +I DHMR MK+ AIVCNIGHFDNEI++ L+
Sbjct: 302 LMEGLQVLTLEDVVSEADIFCTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLE 361
Query: 910 KY---KWENIKPQVDHIIFPDGKK-IILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQI 965
Y K IKPQ D +FPD II+LAEGRL+NLGC TGHPS+VMS SF NQ +AQ+
Sbjct: 362 TYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQL 421
Query: 966 ELFNNTSN--YPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLD 1023
EL+N S+ Y +Y LPK LDEKVA L L KL +L+KLT Q+ Y+ + GPYK
Sbjct: 422 ELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKDQSDYVSIPVEGPYKPV 481
Query: 1024 NYRY 1027
+YRY
Sbjct: 482 HYRY 485
|
|
| TAIR|locus:2129256 HOG1 "HOMOLOGY-DEPENDENT GENE SILENCING 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1291 (459.5 bits), Expect = 1.2e-131, P = 1.2e-131
Identities = 271/484 (55%), Positives = 338/484 (69%)
Query: 557 EVLKNSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTI 616
E + ++ + D++ + +GR E+E+AE EM L++ R EF S+P KGARI+GS+HMTI
Sbjct: 6 EKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTI 65
Query: 617 QTAVLIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIF 676
QTAVLIETL LGAEVRW SCNI+STQDHAAAAIA VFA+KGE++ +YW R
Sbjct: 66 QTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERAL 125
Query: 677 DW-PGNSNTEQANMILDDGGDATFLLHLGAQAEN---NISILSNPCSEE--EVCLFKSI- 729
DW PG ++I+DDGGDAT L+H G +AE + +P S + E + SI
Sbjct: 126 DWGPGGG----PDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSII 181
Query: 730 KNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNL 789
K L++D K Y +++ GV+EETTTGV RL +M + G L FPAINVNDSVTKSKFDNL
Sbjct: 182 KEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDNL 241
Query: 790 YGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA 849
YGCR SL DG+ RATDVMIAGK+AVI GYGDVGKG A AM+ A+V + EIDPICALQA
Sbjct: 242 YGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQA 301
Query: 850 AMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909
MEG V+T+E DIFVT TGN +I DHMR MK+ AIVCNIGHFDNEI++ L+
Sbjct: 302 LMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLE 361
Query: 910 KY---KWENIKPQVDHIIFPDGKK-IILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQI 965
Y K IKPQ D +FP+ K II+LAEGRL+NLGC TGHPS+VMS SF NQ +AQ+
Sbjct: 362 TYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQL 421
Query: 966 ELFNNTSN--YPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLD 1023
EL+N ++ Y +Y LPK LDEKVA L L KL +L+KL+ Q+ Y+ + GPYK
Sbjct: 422 ELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKPP 481
Query: 1024 NYRY 1027
+YRY
Sbjct: 482 HYRY 485
|
|
| UNIPROTKB|P60176 ahcY "Adenosylhomocysteinase" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 1268 (451.4 bits), Expect = 3.2e-129, P = 3.2e-129
Identities = 269/486 (55%), Positives = 340/486 (69%)
Query: 559 LKNSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQT 618
++N DF IAD++L+ +GRKE+ IAE EM L+S+R E+ + +PLKGARISGS+HMT+QT
Sbjct: 15 VRNGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQT 74
Query: 619 AVLIETLKCLGAEVRWSSCNIYSTQDHAAAAIA---------SKGIPVFAFKGESISDYW 669
AVLIETL LGAEVRW+SCNI+STQDHAAAA+ KG+PVFA+KGE++ +YW
Sbjct: 75 AVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPDEPKGVPVFAWKGETLEEYW 134
Query: 670 EFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSI 729
++ WP + ANMILDDGGDAT L+ G Q E ++ P E++ +K
Sbjct: 135 WAAEQMLTWPDPD--KPANMILDDGGDATMLVLRGMQYEK-AGVVP-PAEEDDPAEWKVF 190
Query: 730 KNKLKI-----DSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKS 784
N L+ KW + + +KGVTEETTTGV RL + G L+FPAINVNDSVTKS
Sbjct: 191 LNLLRTRFETDKDKW-TKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKS 249
Query: 785 KFDNLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPI 844
KFDN YG R SLIDGI R TD +I GK +I GYGDVGKG A+AM+ A+V + EIDPI
Sbjct: 250 KFDNKYGTRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPI 309
Query: 845 CALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIE 904
ALQA MEGF VVT+E A DI VT TGN +I +H++ MKD AI+ NIGHFDNEI+
Sbjct: 310 NALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEID 369
Query: 905 VEKLKKYKWE--NIKPQVDHIIFPD-GKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQT 961
+ L++ N+KPQVD F D G+ II+L+EGRL+NLG TGHPS+VMS+SFANQT
Sbjct: 370 MAGLERSGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQT 429
Query: 962 LAQIELFNNTSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYK 1021
+AQIEL+ Y +Y LPK LDEKVAR+ ++ L L+KLT +QA+Y+GV GPYK
Sbjct: 430 IAQIELWTKNDEYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYK 489
Query: 1022 LDNYRY 1027
D+YRY
Sbjct: 490 PDHYRY 495
|
|
| TIGR_CMR|GSU_1880 GSU_1880 "S-adenosylmethionine synthetase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 1230 (438.0 bits), Expect = 3.4e-125, P = 3.4e-125
Identities = 225/377 (59%), Positives = 297/377 (78%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVSEGHPDK+ADQ+SDAILD I +D +ARVA ETL + V++GEITT A +DY +
Sbjct: 11 ESVSEGHPDKVADQVSDAILDAILTQDKRARVACETLVTTGMAVIAGEITTTAVVDYPKV 70
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
VR+TIK+IGYN+ G D+++CAVL+ +KQS DI+QGV EGEG+ +QGAGDQGLMFGY
Sbjct: 71 VRETIKEIGYNDSAMGFDWETCAVLVSIDKQSPDISQGVTEGEGMFKEQGAGDQGLMFGY 130
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNGKPVAIDTIVL 367
AC+ETPELMP I YSH + ++ +E+RKNG L +LRPD+KSQV+++Y + +PV +DT+V+
Sbjct: 131 ACNETPELMPMTIMYSHRLTQKLAEVRKNGTLDFLRPDSKSQVSIQYVDDRPVRVDTVVI 190
Query: 368 STQHDPEIPYRSXXXXXXXXXXXXXXXXNLLKN-TRYLINPTGRFVIGGPKGDCGLTGRK 426
S+QH PE+ Y + L+ + TR+LINPTGRFVIGGP GDCGLTGRK
Sbjct: 191 SSQHTPEVSYETIKEGIIEEVVKKIIPVELMDDKTRFLINPTGRFVIGGPMGDCGLTGRK 250
Query: 427 IIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVA 486
IIVD+YGG HGGGAFSGKDPSK+DRSAAY+GRY+AKN+VAA L +RC++Q++YAIGVA
Sbjct: 251 IIVDSYGGHGAHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCERCEVQVAYAIGVA 310
Query: 487 KPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEP 546
+P S+MV + G+GKI ++ ++++ FDLRP+ II+ L+LLRPIY+KT+ YGHFGR+ P
Sbjct: 311 EPVSVMVDTAGTGKIPSARIAEIIREVFDLRPRAIIEQLDLLRPIYRKTAAYGHFGRELP 370
Query: 547 EFTWELTDKAEVLKNSA 563
EFTWE TDK ++++ A
Sbjct: 371 EFTWERTDKIDIIRQKA 387
|
|
| TIGR_CMR|SO_0929 SO_0929 "S-adenosylmethionine synthetase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 1192 (424.7 bits), Expect = 3.6e-121, P = 3.6e-121
Identities = 236/377 (62%), Positives = 278/377 (73%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVSEGHPDKIADQISDA+LD I +D KARVA ET ++++ GE+TT A +D +
Sbjct: 9 ESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEEL 68
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
RKT+++IGY + D G D SCAVL KQS DI QGV+ + +QGAGDQGLMFGY
Sbjct: 69 TRKTVREIGYIHSDMGFDADSCAVLNAIGKQSPDINQGVDRADPK--EQGAGDQGLMFGY 126
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNGKPVAIDTIVL 367
A +ET LMP+ I Y+H +VKRQSE+RKNG LPWLRPDAKSQVT Y++ K V ID IVL
Sbjct: 127 ASNETDILMPAPITYAHALVKRQSEVRKNGTLPWLRPDAKSQVTFAYEDNKIVGIDAIVL 186
Query: 368 STQHDPEIPYRSXXXXXXXXXXXXXXXXNLL-KNTRYLINPTGRFVIGGPKGDCGLTGRK 426
STQH P+I L K+T+Y INPTGRFVIGGP GDCGLTGRK
Sbjct: 187 STQHSPDIAQADLIEGVMETIIKPVLPAQWLNKDTKYFINPTGRFVIGGPMGDCGLTGRK 246
Query: 427 IIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVA 486
IIVDTYGG A HGGGAFSGKDPSK+DRSAAY RY+AKNIVAA LA RC+IQ+SYAIGVA
Sbjct: 247 IIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVA 306
Query: 487 KPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEP 546
+PTSI V +FG+GK+S+E L LV++HFDLRP + +MLNL RPIY+ T+ YGHFGR E
Sbjct: 307 EPTSISVETFGTGKVSEEVLIKLVRQHFDLRPYGLTEMLNLARPIYQATAAYGHFGRSE- 365
Query: 547 EFTWELTDKAEVLKNSA 563
F WE TDKAE L+ A
Sbjct: 366 -FPWEATDKAEALRADA 381
|
|
| TIGR_CMR|CBU_2030 CBU_2030 "S-adenosylmethionine synthetase" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 1191 (424.3 bits), Expect = 4.6e-121, P = 4.6e-121
Identities = 233/384 (60%), Positives = 283/384 (73%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVSEGHPDK+ADQISDA+LD + +D RVA E + + ++ ++GEITT+A D I
Sbjct: 10 ESVSEGHPDKVADQISDAVLDALIGQDPNCRVACEAVVKSGMVFVAGEITTNAWADVEQI 69
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
R T+ IGYN+ G D ++CAV+ KQS DI GV+ E + + GAGDQGLMFGY
Sbjct: 70 TRNTVLQIGYNDPHLGFDGETCAVVTAIGKQSPDIVMGVDGRE--DQELGAGDQGLMFGY 127
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNGKPVAIDTIVL 367
A ET MP+ I Y+H +V++Q+ LRKNG LPWLRPDAKSQVTLRY+NGKPVA D IVL
Sbjct: 128 ASRETNVFMPAPITYAHRLVRQQALLRKNGRLPWLRPDAKSQVTLRYENGKPVAADCIVL 187
Query: 368 STQHDPEIPYRSXXXXXXXXXXXXXXXXNLL-KNTRYLINPTGRFVIGGPKGDCGLTGRK 426
STQH PEI S + L K+TR+L+NPTGRFVIGGP GDCGLTGRK
Sbjct: 188 STQHSPEISQESLREAVIDEIIKPIMPPHWLDKHTRFLVNPTGRFVIGGPVGDCGLTGRK 247
Query: 427 IIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVA 486
IIVDTYGG A HGGG FSGKDPSK+DRS AY RY+AKNIVA LA RC+IQ+SYAIGVA
Sbjct: 248 IIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVA 307
Query: 487 KPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEP 546
+PTSI V +FG+GKI + ++ L+K+HFDLRP II+ LNLLR IYK T+ YGHFGR+EP
Sbjct: 308 EPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLRSIYKATATYGHFGREEP 367
Query: 547 EFTWELTDKAEVLKNSADFVIADI 570
EFTWE TDKAE+L+ +A A++
Sbjct: 368 EFTWERTDKAEILREAAGLAAANV 391
|
|
| UNIPROTKB|P0A817 metK "methionine adenosyltransferase" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 1189 (423.6 bits), Expect = 7.4e-121, P = 7.4e-121
Identities = 234/377 (62%), Positives = 285/377 (75%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVSEGHPDKIADQISDA+LD I +D KARVA ET ++++ GEITT A +D I
Sbjct: 9 ESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEI 68
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
R T+++IGY + D G D SCAVL KQS DI QGV+ + L +QGAGDQGLMFGY
Sbjct: 69 TRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPL--EQGAGDQGLMFGY 126
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNGKPVAIDTIVL 367
A +ET LMP+ I Y+H +V+RQ+E+RKNG LPWLRPDAKSQVT +YD+GK V ID +VL
Sbjct: 127 ATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVGIDAVVL 186
Query: 368 STQHDPEIPYRSXXXXXXXXXXXXXXXXNLLKN-TRYLINPTGRFVIGGPKGDCGLTGRK 426
STQH EI +S L + T++ INPTGRFVIGGP GDCGLTGRK
Sbjct: 187 STQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRK 246
Query: 427 IIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVA 486
IIVDTYGG A HGGGAFSGKDPSK+DRSAAY RY+AKNIVAA LA RC+IQ+SYAIGVA
Sbjct: 247 IIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVA 306
Query: 487 KPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEP 546
+PTSIMV +FG+ K+ E+LT+LV++ FDLRP +I+ML+LL PIYK+T+ YGHFGR+
Sbjct: 307 EPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGREH- 365
Query: 547 EFTWELTDKAEVLKNSA 563
F WE TDKA++L+++A
Sbjct: 366 -FPWEKTDKAQLLRDAA 381
|
|
| UNIPROTKB|P0A819 metK "S-adenosylmethionine synthase" [Escherichia coli O157:H7 (taxid:83334)] | Back alignment and assigned GO terms |
|---|
Score = 1189 (423.6 bits), Expect = 7.4e-121, P = 7.4e-121
Identities = 234/377 (62%), Positives = 285/377 (75%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVSEGHPDKIADQISDA+LD I +D KARVA ET ++++ GEITT A +D I
Sbjct: 9 ESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEI 68
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
R T+++IGY + D G D SCAVL KQS DI QGV+ + L +QGAGDQGLMFGY
Sbjct: 69 TRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPL--EQGAGDQGLMFGY 126
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNGKPVAIDTIVL 367
A +ET LMP+ I Y+H +V+RQ+E+RKNG LPWLRPDAKSQVT +YD+GK V ID +VL
Sbjct: 127 ATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVGIDAVVL 186
Query: 368 STQHDPEIPYRSXXXXXXXXXXXXXXXXNLLKN-TRYLINPTGRFVIGGPKGDCGLTGRK 426
STQH EI +S L + T++ INPTGRFVIGGP GDCGLTGRK
Sbjct: 187 STQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRK 246
Query: 427 IIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVA 486
IIVDTYGG A HGGGAFSGKDPSK+DRSAAY RY+AKNIVAA LA RC+IQ+SYAIGVA
Sbjct: 247 IIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVA 306
Query: 487 KPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEP 546
+PTSIMV +FG+ K+ E+LT+LV++ FDLRP +I+ML+LL PIYK+T+ YGHFGR+
Sbjct: 307 EPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGREH- 365
Query: 547 EFTWELTDKAEVLKNSA 563
F WE TDKA++L+++A
Sbjct: 366 -FPWEKTDKAQLLRDAA 381
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q7V9P3 | SAHH_PROMA | 3, ., 3, ., 1, ., 1 | 0.6602 | 0.4498 | 0.9705 | yes | N/A |
| B2U774 | SAHH_RALPJ | 3, ., 3, ., 1, ., 1 | 0.7457 | 0.4488 | 0.9725 | yes | N/A |
| B9MD45 | SAHH_ACIET | 3, ., 3, ., 1, ., 1 | 0.7209 | 0.4576 | 0.9873 | yes | N/A |
| Q5P6B7 | SAHH_AROAE | 3, ., 3, ., 1, ., 1 | 0.7340 | 0.4547 | 0.9936 | yes | N/A |
| Q1LS20 | SAHH_RALME | 3, ., 3, ., 1, ., 1 | 0.7403 | 0.4488 | 0.9766 | yes | N/A |
| Q8Y387 | SAHH_RALSO | 3, ., 3, ., 1, ., 1 | 0.7435 | 0.4488 | 0.9725 | yes | N/A |
| A4G975 | SAHH_HERAR | 3, ., 3, ., 1, ., 1 | 0.7825 | 0.4547 | 0.9749 | yes | N/A |
| A1TUG3 | SAHH_ACIAC | 3, ., 3, ., 1, ., 1 | 0.6970 | 0.4576 | 0.9894 | yes | N/A |
| Q62G22 | SAHH_BURMA | 3, ., 3, ., 1, ., 1 | 0.7109 | 0.4518 | 0.9809 | yes | N/A |
| B1XSH8 | SAHH_POLNS | 3, ., 3, ., 1, ., 1 | 0.7286 | 0.4459 | 0.9521 | yes | N/A |
| Q3JY79 | SAHH_BURP1 | 3, ., 3, ., 1, ., 1 | 0.7109 | 0.4518 | 0.9809 | yes | N/A |
| Q63PT2 | SAHH_BURPS | 3, ., 3, ., 1, ., 1 | 0.7109 | 0.4518 | 0.9809 | yes | N/A |
| Q2STU0 | SAHH_BURTA | 3, ., 3, ., 1, ., 1 | 0.7052 | 0.4586 | 0.9957 | yes | N/A |
| A9IGY5 | SAHH_BORPD | 3, ., 3, ., 1, ., 1 | 0.7038 | 0.4498 | 0.9788 | yes | N/A |
| A6T2Y9 | SAHH_JANMA | 3, ., 3, ., 1, ., 1 | 0.7782 | 0.4547 | 0.9749 | yes | N/A |
| C5CM29 | SAHH_VARPS | 3, ., 3, ., 1, ., 1 | 0.7164 | 0.4547 | 0.9749 | yes | N/A |
| A1V8Z2 | SAHH_BURMS | 3, ., 3, ., 1, ., 1 | 0.7109 | 0.4518 | 0.9809 | yes | N/A |
| Q82WL1 | SAHH_NITEU | 3, ., 3, ., 1, ., 1 | 0.6716 | 0.4566 | 0.9811 | yes | N/A |
| Q1CY84 | SAHH_MYXXD | 3, ., 3, ., 1, ., 1 | 0.7231 | 0.4518 | 0.9747 | yes | N/A |
| A2S6W2 | SAHH_BURM9 | 3, ., 3, ., 1, ., 1 | 0.7109 | 0.4518 | 0.9809 | yes | N/A |
| A9BD69 | SAHH_PROM4 | 3, ., 3, ., 1, ., 1 | 0.6652 | 0.4537 | 0.9789 | yes | N/A |
| Q318B6 | SAHH_PROM9 | 3, ., 3, ., 1, ., 1 | 0.6553 | 0.4537 | 0.9872 | yes | N/A |
| A4T0E9 | SAHH_POLSQ | 3, ., 3, ., 1, ., 1 | 0.7264 | 0.4459 | 0.9521 | yes | N/A |
| Q7UZN3 | SAHH_PROMP | 3, ., 3, ., 1, ., 1 | 0.6594 | 0.4479 | 0.9745 | yes | N/A |
| A3MQW7 | SAHH_BURM7 | 3, ., 3, ., 1, ., 1 | 0.7109 | 0.4518 | 0.9809 | yes | N/A |
| Q7V926 | SAHH_PROMM | 3, ., 3, ., 1, ., 1 | 0.6588 | 0.4537 | 0.9789 | yes | N/A |
| B2T6X2 | SAHH_BURPP | 3, ., 3, ., 1, ., 1 | 0.7072 | 0.4527 | 0.9830 | yes | N/A |
| A3PFB5 | SAHH_PROM0 | 3, ., 3, ., 1, ., 1 | 0.6652 | 0.4469 | 0.9724 | yes | N/A |
| Q13T36 | SAHH_BURXL | 3, ., 3, ., 1, ., 1 | 0.7072 | 0.4527 | 0.9830 | yes | N/A |
| Q60CG8 | SAHH_METCA | 3, ., 3, ., 1, ., 1 | 0.7004 | 0.4488 | 0.9766 | yes | N/A |
| A2SL00 | SAHH_METPP | 3, ., 3, ., 1, ., 1 | 0.6931 | 0.4518 | 0.9727 | yes | N/A |
| Q0IDX7 | SAHH_SYNS3 | 3, ., 3, ., 1, ., 1 | 0.6588 | 0.4537 | 0.9789 | yes | N/A |
| A8G7D1 | SAHH_PROM2 | 3, ., 3, ., 1, ., 1 | 0.6630 | 0.4469 | 0.9724 | yes | N/A |
| B2AGG2 | SAHH_CUPTR | 3, ., 3, ., 1, ., 1 | 0.7424 | 0.4488 | 0.9766 | yes | N/A |
| A2C620 | SAHH_PROM3 | 3, ., 3, ., 1, ., 1 | 0.6567 | 0.4537 | 0.9789 | yes | N/A |
| A3NER1 | SAHH_BURP6 | 3, ., 3, ., 1, ., 1 | 0.7109 | 0.4518 | 0.9809 | yes | N/A |
| Q7W1Z7 | SAHH_BORPA | 3, ., 3, ., 1, ., 1 | 0.7078 | 0.4527 | 0.9851 | yes | N/A |
| Q7NZF7 | SAHH_CHRVO | 3, ., 3, ., 1, ., 1 | 0.6780 | 0.4537 | 1.0 | yes | N/A |
| B2JIP4 | SAHH_BURP8 | 3, ., 3, ., 1, ., 1 | 0.7115 | 0.4527 | 0.9830 | yes | N/A |
| Q3ANF4 | SAHH_SYNSC | 3, ., 3, ., 1, ., 1 | 0.6631 | 0.4586 | 0.9894 | yes | N/A |
| Q7WQX5 | SAHH_BORBR | 3, ., 3, ., 1, ., 1 | 0.7078 | 0.4527 | 0.9851 | yes | N/A |
| Q0KF25 | SAHH_CUPNH | 3, ., 3, ., 1, ., 1 | 0.7339 | 0.4488 | 0.9766 | yes | N/A |
| B1Y647 | SAHH_LEPCP | 3, ., 3, ., 1, ., 1 | 0.7038 | 0.4518 | 0.9727 | yes | N/A |
| A3P0L8 | SAHH_BURP0 | 3, ., 3, ., 1, ., 1 | 0.7109 | 0.4518 | 0.9809 | yes | N/A |
| Q476T8 | SAHH_CUPPJ | 3, ., 3, ., 1, ., 1 | 0.7403 | 0.4488 | 0.9766 | yes | N/A |
| P61617 | SAHH_GEOSL | 3, ., 3, ., 1, ., 1 | 0.7268 | 0.4498 | 0.9726 | yes | N/A |
| A1W3P0 | SAHH_ACISJ | 3, ., 3, ., 1, ., 1 | 0.7188 | 0.4576 | 0.9873 | yes | N/A |
| Q7VUL8 | SAHH_BORPE | 3, ., 3, ., 1, ., 1 | 0.7121 | 0.4527 | 0.9851 | yes | N/A |
| A9C184 | SAHH_DELAS | 3, ., 3, ., 1, ., 1 | 0.6983 | 0.4595 | 0.9915 | yes | N/A |
| Q0AEV8 | SAHH_NITEC | 3, ., 3, ., 1, ., 1 | 0.6737 | 0.4566 | 0.9811 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1027 | |||
| smart00996 | 426 | smart00996, AdoHcyase, S-adenosyl-L-homocysteine h | 0.0 | |
| PRK05476 | 425 | PRK05476, PRK05476, S-adenosyl-L-homocysteine hydr | 0.0 | |
| PRK05250 | 384 | PRK05250, PRK05250, S-adenosylmethionine synthetas | 0.0 | |
| PTZ00075 | 476 | PTZ00075, PTZ00075, Adenosylhomocysteinase; Provis | 0.0 | |
| cd00401 | 402 | cd00401, SAHH, S-Adenosylhomocysteine Hydrolase, N | 0.0 | |
| COG0192 | 388 | COG0192, MetK, S-adenosylmethionine synthetase [Co | 0.0 | |
| COG0499 | 420 | COG0499, SAM1, S-adenosylhomocysteine hydrolase [C | 0.0 | |
| pfam05221 | 430 | pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hy | 0.0 | |
| TIGR01034 | 377 | TIGR01034, metK, S-adenosylmethionine synthetase | 0.0 | |
| PLN02494 | 477 | PLN02494, PLN02494, adenosylhomocysteinase | 0.0 | |
| TIGR00936 | 407 | TIGR00936, ahcY, adenosylhomocysteinase | 0.0 | |
| PRK12459 | 386 | PRK12459, PRK12459, S-adenosylmethionine synthetas | 0.0 | |
| PTZ00104 | 398 | PTZ00104, PTZ00104, S-adenosylmethionine synthase; | 0.0 | |
| PLN02243 | 386 | PLN02243, PLN02243, S-adenosylmethionine synthase | 1e-155 | |
| pfam00670 | 162 | pfam00670, AdoHcyase_NAD, S-adenosyl-L-homocystein | 5e-95 | |
| smart00997 | 162 | smart00997, AdoHcyase_NAD, S-adenosyl-L-homocystei | 1e-94 | |
| pfam02773 | 138 | pfam02773, S-AdoMet_synt_C, S-adenosylmethionine s | 1e-78 | |
| pfam02772 | 119 | pfam02772, S-AdoMet_synt_M, S-adenosylmethionine s | 4e-71 | |
| pfam00438 | 100 | pfam00438, S-AdoMet_synt_N, S-adenosylmethionine s | 6e-47 | |
| cd12154 | 310 | cd12154, FDH_GDH_like, Formate/glycerate dehydroge | 1e-45 | |
| COG2945 | 210 | COG2945, COG2945, Predicted hydrolase of the alpha | 5e-44 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 2e-10 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 6e-09 | |
| cd05300 | 313 | cd05300, 2-Hacid_dh_1, Putative D-isomer specific | 2e-05 | |
| pfam02826 | 175 | pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydro | 0.001 |
| >gnl|CDD|214963 smart00996, AdoHcyase, S-adenosyl-L-homocysteine hydrolase | Back alignment and domain information |
|---|
Score = 838 bits (2167), Expect = 0.0
Identities = 299/464 (64%), Positives = 345/464 (74%), Gaps = 41/464 (8%)
Query: 566 VIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETL 625
+ADI+L+ WGRKEIEIAETEM L+++REE+ KPLKGARI+G +HMTIQTAVLIETL
Sbjct: 1 KVADISLADWGRKEIEIAETEMPGLMALREEYGAEKPLKGARIAGCLHMTIQTAVLIETL 60
Query: 626 KCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSNTE 685
LGAEVRW+SCNI+STQDHAAAAIA+ G+PVFA+KGE++ +YW + WP
Sbjct: 61 VALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAWKGETLEEYWWCIEQTLTWPDG---W 117
Query: 686 QANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSSRLK 745
NMILDDGGDAT L+H K Y LK
Sbjct: 118 GPNMILDDGGDATLLVH-----------------------------------KKYPRMLK 142
Query: 746 QIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRATD 805
+I+GV+EETTTGV+RL +M K+GKL FPAINVNDSVTKSKFDNLYGCRESL+DGIKRATD
Sbjct: 143 KIRGVSEETTTGVHRLYQMAKKGKLLFPAINVNDSVTKSKFDNLYGCRESLVDGIKRATD 202
Query: 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKY 865
VMIAGK+AV+ GYGDVGKG AQ++R A+V + EIDPICALQAAM+GF VVTME
Sbjct: 203 VMIAGKVAVVCGYGDVGKGCAQSLRGQGARVIVTEIDPICALQAAMDGFEVVTMEEVAPQ 262
Query: 866 GDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKY---KWENIKPQVDH 922
DIFVT TGN VIT +HMR MKD AIVCNIGHFDNEI+V L+ KWENIKPQVDH
Sbjct: 263 ADIFVTTTGNKDVITREHMRAMKDGAIVCNIGHFDNEIDVASLRNNPGLKWENIKPQVDH 322
Query: 923 IIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIYTLP 982
I FPDGK+IILLAEGRLVNLGC TGHPS+VMS+SF NQ LAQIELF Y G+Y LP
Sbjct: 323 ITFPDGKRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKPGKYKNGVYVLP 382
Query: 983 KILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYR 1026
K LDEKVARL L+KL +L+KLT +QA YIGV GP+K D+YR
Sbjct: 383 KKLDEKVARLHLEKLGAKLTKLTKEQADYIGVPVEGPFKPDHYR 426
|
Length = 426 |
| >gnl|CDD|235488 PRK05476, PRK05476, S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 795 bits (2056), Expect = 0.0
Identities = 279/463 (60%), Positives = 325/463 (70%), Gaps = 43/463 (9%)
Query: 561 NSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAV 620
D+ +ADI+L+ WGRKEIE AETEM L++IREEF KPLKGARI+G +HMTIQTAV
Sbjct: 4 TGTDYKVADISLADWGRKEIEWAETEMPGLMAIREEFAAEKPLKGARIAGCLHMTIQTAV 63
Query: 621 LIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPG 680
LIETLK LGAEVRW+SCN +STQD AAA+A+ GIPVFA+KGE++ +YWE R D
Sbjct: 64 LIETLKALGAEVRWASCNPFSTQDDVAAALAAAGIPVFAWKGETLEEYWECIERALDG-- 121
Query: 681 NSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWY 740
NMILDDGGD T L+H
Sbjct: 122 ----HGPNMILDDGGDLTLLVH-----------------------------------TER 142
Query: 741 SSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGI 800
L IKGVTEETTTGV+RL M K+G L FPAINVNDSVTKSKFDN YG ESL+DGI
Sbjct: 143 PELLANIKGVTEETTTGVHRLYAMAKDGALKFPAINVNDSVTKSKFDNRYGTGESLLDGI 202
Query: 801 KRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTME 860
KRAT+V+IAGK+ V+ GYGDVGKG AQ +R L A+V + E+DPICALQAAM+GF V+TME
Sbjct: 203 KRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTME 262
Query: 861 YAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKY--KWENIKP 918
A + GDIFVT TGN VIT +HM MKD AI+ NIGHFDNEI+V L++ KW IKP
Sbjct: 263 EAAELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNEIDVAALEELAVKWREIKP 322
Query: 919 QVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGI 978
QVD PDGK+IILLAEGRLVNLG TGHPS VM SFANQ LAQIELF N G+
Sbjct: 323 QVDEYTLPDGKRIILLAEGRLVNLGAATGHPSEVMDMSFANQALAQIELFTNRGKLEPGV 382
Query: 979 YTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYK 1021
Y LPK LDE+VARL+LK L V+L +LT++QA+YIGV GP+K
Sbjct: 383 YVLPKELDEEVARLKLKALGVKLDELTEEQAEYIGVWVEGPFK 425
|
Length = 425 |
| >gnl|CDD|235374 PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated | Back alignment and domain information |
|---|
Score = 749 bits (1936), Expect = 0.0
Identities = 245/378 (64%), Positives = 304/378 (80%), Gaps = 3/378 (0%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVSEGHPDKIADQISDAILD I +D ARVA ETL L+V++GEITT A +D I
Sbjct: 8 ESVSEGHPDKIADQISDAILDAILAQDPNARVACETLVTTGLVVVAGEITTSAYVDIEEI 67
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
VR+TIK+IGY + +YG D +CAVL+ +QS DIAQGV+ E + GAGDQG+MFGY
Sbjct: 68 VRETIKEIGYTSSEYGFDANTCAVLVSIGEQSPDIAQGVDRDELD--EIGAGDQGIMFGY 125
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNGKPVAIDTIVL 367
AC+ETPELMP I +H +V+R +E+RK+G LP+LRPDAKSQVT+ Y+NGKPV IDTIV+
Sbjct: 126 ACNETPELMPLPITLAHRLVRRLAEVRKSGTLPYLRPDAKSQVTVEYENGKPVRIDTIVV 185
Query: 368 STQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKGDCGLTGRK 426
STQHDP++ ++E IEE+I+P++P LL ++T++LINPTGRFVIGGP+GD GLTGRK
Sbjct: 186 STQHDPDVSQEQLREDVIEEVIKPVLPAELLDEDTKFLINPTGRFVIGGPQGDAGLTGRK 245
Query: 427 IIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVA 486
IIVDTYGG A HGGGAFSGKDP+K+DRSAAY RY+AKNIVAA LA RC++Q+SYAIGVA
Sbjct: 246 IIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADRCEVQLSYAIGVA 305
Query: 487 KPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEP 546
+P SI V +FG+GK+SDEK+ V++ FDLRP IIKML+L RPIY+KT+ YGHFGR++
Sbjct: 306 EPVSIYVDTFGTGKVSDEKIEEAVREVFDLRPAGIIKMLDLRRPIYRKTAAYGHFGREDL 365
Query: 547 EFTWELTDKAEVLKNSAD 564
+F WE TDK E LK +A
Sbjct: 366 DFPWEKTDKVEALKAAAG 383
|
Length = 384 |
| >gnl|CDD|240258 PTZ00075, PTZ00075, Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Score = 729 bits (1884), Expect = 0.0
Identities = 296/476 (62%), Positives = 363/476 (76%), Gaps = 15/476 (3%)
Query: 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIE 623
D+ + DI+L+++GRKEIE+AE EM L+++REE+ SKPLKGARI+G +HMT+QTAVLIE
Sbjct: 4 DYKVKDISLAEFGRKEIELAENEMPGLMALREEYGPSKPLKGARITGCLHMTVQTAVLIE 63
Query: 624 TLKCLGAEVRWSSCNIYSTQDHAAAAIASKG-IPVFAFKGESISDYWEFNHRIFDWPGNS 682
TLK LGAEVRW SCNI+STQDHAAAAIA G +PVFA+KGE++ +YW + WP
Sbjct: 64 TLKALGAEVRWCSCNIFSTQDHAAAAIAKAGSVPVFAWKGETLEEYWWCTEQALKWP--- 120
Query: 683 NTEQANMILDDGGDATFLLHLGAQAE------NNISILSNPCSEEEVCLFKSIKNKLKID 736
N + N+I+DDGGDAT L+H G +AE + +P +E+E CL +K L +
Sbjct: 121 NGDGPNLIVDDGGDATLLVHEGVKAEKLYEEKGILPDPLDPSNEDEKCLLTVLKKLLTKN 180
Query: 737 SKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESL 796
+++ +K+I GV+EETTTGV+RL +M K+G+L FPAINVNDSVTKSKFDN+YGCR SL
Sbjct: 181 PDKWTNLVKKIVGVSEETTTGVHRLYKMLKKGELLFPAINVNDSVTKSKFDNIYGCRHSL 240
Query: 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV 856
IDGI RATDVMIAGK V+ GYGDVGKG AQA+R A+V + EIDPICALQAAMEG+ V
Sbjct: 241 IDGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQV 300
Query: 857 VTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKY---KW 913
VT+E + DIFVT TGN +IT +HMR MK+ AIV NIGHFDNEI+V +L+ Y +
Sbjct: 301 VTLEDVVETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHFDNEIQVAELEAYPGIEI 360
Query: 914 ENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSN 973
IKPQVD FPDGK IILLAEGRLVNLGC TGHPS+VMS+SF NQ LAQIEL+ N
Sbjct: 361 VEIKPQVDRYTFPDGKGIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWENRDT 420
Query: 974 --YPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
YP G+Y LPK LDEKVARL LKKL +L+KLTD+QA+YIGV +GPYK D+YRY
Sbjct: 421 GKYPNGVYKLPKELDEKVARLHLKKLGAKLTKLTDKQAEYIGVPVDGPYKSDHYRY 476
|
Length = 476 |
| >gnl|CDD|240619 cd00401, SAHH, S-Adenosylhomocysteine Hydrolase, NAD-binding and catalytic domains | Back alignment and domain information |
|---|
Score = 718 bits (1855), Expect = 0.0
Identities = 247/442 (55%), Positives = 296/442 (66%), Gaps = 44/442 (9%)
Query: 575 WGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRW 634
+GRKEIE AE EM L+++RE + K KPLKGARI+G +HMT QTAVLIETLK LGAEVRW
Sbjct: 2 FGRKEIEWAEQEMPVLMALRERYAKEKPLKGARIAGCLHMTAQTAVLIETLKALGAEVRW 61
Query: 635 SSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDG 694
SCN STQD AAA+A GIPVFA+KGE+ +YW + D N+I+DDG
Sbjct: 62 CSCNPLSTQDDVAAALAEAGIPVFAWKGETEEEYWWCIEQALDH-------GPNLIIDDG 114
Query: 695 GDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEET 754
GD T LLH LK+I G +EET
Sbjct: 115 GDLTHLLHTKRPDL-----------------------------------LKKIIGGSEET 139
Query: 755 TTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKIAV 814
TTGV+RLR M KEGKL FPAI VND+VTK KFDN YG +S IDGIKRAT+V+IAGK+ V
Sbjct: 140 TTGVHRLRAMEKEGKLLFPAIAVNDAVTKHKFDNRYGTGQSTIDGIKRATNVLIAGKVVV 199
Query: 815 IIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG 874
+ GYG VGKG A R L A+V + E+DPICALQAAM+GF V+ ME A K GDIFVT TG
Sbjct: 200 VAGYGWVGKGCAMRARGLGARVIVTEVDPICALQAAMDGFEVMPMEEAAKIGDIFVTATG 259
Query: 875 NYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKY--KWENIKPQVDHIIFPDGKKII 932
N VI +H MKD AI+CN GHFD EI+V L++ + I+PQVD PDG++II
Sbjct: 260 NKDVIRGEHFEKMKDGAILCNAGHFDVEIDVAALEELAVEKREIRPQVDEYTLPDGRRII 319
Query: 933 LLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIYTLPKILDEKVARL 992
LLAEGRLVNL C TGHPS+VM SFANQ LAQIEL+ N G+Y LPK LDE+VARL
Sbjct: 320 LLAEGRLVNLACATGHPSFVMDMSFANQALAQIELWKNRDKLEPGVYVLPKELDEEVARL 379
Query: 993 QLKKLNVQLSKLTDQQAKYIGV 1014
+L+ L ++L KLT++QA+Y+G
Sbjct: 380 KLEALGIKLDKLTEEQAEYLGS 401
|
S-adenosyl-L-homocysteine hydrolase (SAHH, AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homotetramers, with each monomer binding one molecule of NAD+. Length = 402 |
| >gnl|CDD|223270 COG0192, MetK, S-adenosylmethionine synthetase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Score = 692 bits (1789), Expect = 0.0
Identities = 249/375 (66%), Positives = 300/375 (80%), Gaps = 3/375 (0%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVSEGHPDKI DQISDAILD I +D +RVA ETL L+V++GEITT A +D VNI
Sbjct: 10 ESVSEGHPDKICDQISDAILDAILKQDPNSRVACETLVTTGLVVIAGEITTSAYVDIVNI 69
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
RKTIK+IGY DYG D K+CAVL+ +QS DIAQGV+E + + GAGDQG+MFGY
Sbjct: 70 ARKTIKEIGYTESDYGFDAKTCAVLVAIGEQSPDIAQGVDEADEELDEIGAGDQGIMFGY 129
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYD-NGKPVAIDTIV 366
AC+ETPELMP I +H +++R +E+RKNG LPWLRPDAKSQVT+ Y+ NGKPV IDTIV
Sbjct: 130 ACNETPELMPLPISLAHRLLRRLAEVRKNGELPWLRPDAKSQVTVEYEDNGKPVRIDTIV 189
Query: 367 LSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLLK-NTRYLINPTGRFVIGGPKGDCGLTGR 425
+STQHDP+I ++E IEEII+P++P+ LL T+Y INPTGRFVIGGP+GD GLTGR
Sbjct: 190 VSTQHDPDISQEQLREDVIEEIIKPVLPEELLDDKTKYFINPTGRFVIGGPQGDAGLTGR 249
Query: 426 KIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGV 485
KIIVDTYGG A HGGGAFSGKDP+K+DRSAAY RY+AKNIVAA LA RC++Q+SYAIGV
Sbjct: 250 KIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADRCEVQLSYAIGV 309
Query: 486 AKPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKE 545
A+P SI V +FG+GK+S+EK+ V+K FDLRP IIKML+LLRPIY+KT+ YGHFGR E
Sbjct: 310 AEPVSISVDTFGTGKVSEEKIEEAVRKVFDLRPAGIIKMLDLLRPIYRKTAAYGHFGR-E 368
Query: 546 PEFTWELTDKAEVLK 560
+F WE DK + LK
Sbjct: 369 DDFPWEKLDKVDELK 383
|
Length = 388 |
| >gnl|CDD|223573 COG0499, SAM1, S-adenosylhomocysteine hydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Score = 675 bits (1745), Expect = 0.0
Identities = 244/462 (52%), Positives = 306/462 (66%), Gaps = 45/462 (9%)
Query: 561 NSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAV 620
D+ + DI+L+ GRKEIE AE EM L++IREEF + KPLKGARI+G +HMT +TAV
Sbjct: 1 PGQDYKVKDISLADEGRKEIEWAEREMPVLMAIREEFAEEKPLKGARIAGCLHMTAKTAV 60
Query: 621 LIETLKCLGAEVRWSSCNIYSTQDHAAAAI-ASKGIPVFAFKGESISDYWEFNHRIFDWP 679
LIETLK GAEVRW+SCN STQD AAA+ A +GIPVFA+KGE++ +Y+E ++ DW
Sbjct: 61 LIETLKAGGAEVRWASCNPLSTQDDVAAALAAKEGIPVFAWKGETLEEYYEAIDQVLDWE 120
Query: 680 GNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKW 739
N+I+DDGGD T L+HL
Sbjct: 121 -------PNIIIDDGGDLTKLVHLE----------------------------------- 138
Query: 740 YSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDG 799
L IKG TEETTTGV+RLR M K+G L FPAINVNDSVTKS FDN YG +SL+DG
Sbjct: 139 RPELLDAIKGGTEETTTGVHRLRAMEKDGVLKFPAINVNDSVTKSLFDNRYGTGQSLLDG 198
Query: 800 IKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTM 859
I RAT+V++AGK V+ GYG VG+G A +R + A+V + E+DPI AL+AAM+GF V+TM
Sbjct: 199 ILRATNVLLAGKNVVVAGYGWVGRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTM 258
Query: 860 EYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKK--YKWENIK 917
E A K GDIFVT TGN VI +H MKD AI+ N GHFD EI+V L++ + ++
Sbjct: 259 EEAAKTGDIFVTATGNKDVIRKEHFEKMKDGAILANAGHFDVEIDVAGLEELAVEKREVR 318
Query: 918 PQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIG 977
PQVD PDGK+IILLAEGRLVNL TGHPS VM SFANQ LAQI L N G
Sbjct: 319 PQVDEYELPDGKRIILLAEGRLVNLAAATGHPSEVMDMSFANQALAQIYLVKNHGKLEPG 378
Query: 978 IYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGP 1019
+Y LPK LDE+VARL+L+ + ++L +LT++QA+Y+G + G
Sbjct: 379 VYRLPKELDEEVARLKLEAMGIELDELTEEQAEYLGSWEEGT 420
|
Length = 420 |
| >gnl|CDD|218507 pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hydrolase | Back alignment and domain information |
|---|
Score = 674 bits (1742), Expect = 0.0
Identities = 279/468 (59%), Positives = 335/468 (71%), Gaps = 42/468 (8%)
Query: 563 ADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLI 622
AD+ + DI+L+ +GRKEIE+AE EM L+++REE+ S+PLKGARI+G +HMT+QTAVLI
Sbjct: 1 ADYKVKDISLAAFGRKEIELAENEMPGLMALREEYGPSQPLKGARIAGCLHMTVQTAVLI 60
Query: 623 ETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNS 682
ETL LGAEVRW+SCNI+STQDHAAAAIA+ G+PVFA+KGE++ +YW R +
Sbjct: 61 ETLVALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAWKGETLEEYWWCIERALTFKDG- 119
Query: 683 NTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSS 742
+ NMILDDGGDAT L+H K Y
Sbjct: 120 --QGPNMILDDGGDATLLIH-----------------------------------KKYPQ 142
Query: 743 RLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKR 802
L I+GV+EETTTGV+RL +M K+GKL FPAINVNDSVTKSKFDNLYGCRESL DGIKR
Sbjct: 143 YLAGIRGVSEETTTGVHRLYKMLKKGKLLFPAINVNDSVTKSKFDNLYGCRESLPDGIKR 202
Query: 803 ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYA 862
ATDVMIAGK+AV+ GYGDVGKG A ++R A+V + EIDPICALQAAMEG+ VVT+E
Sbjct: 203 ATDVMIAGKVAVVCGYGDVGKGCAASLRGQGARVIVTEIDPICALQAAMEGYQVVTLEEV 262
Query: 863 KKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVE--KLKKYKWENIKPQV 920
K DIFVT TG +I H +MK AIVCNIGHFD EI+V K NIKPQV
Sbjct: 263 VKDADIFVTTTGCVDIIVGRHFMNMKKDAIVCNIGHFDCEIDVGWLNYNAKKITNIKPQV 322
Query: 921 DHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNN--TSNYPIGI 978
D P+G++IILLAEGRL+NLGC TGHPS+VMS+SF NQ LAQIEL+ T Y +G+
Sbjct: 323 DRYTLPNGRRIILLAEGRLLNLGCATGHPSFVMSNSFTNQVLAQIELWTKRDTGKYEVGV 382
Query: 979 YTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYR 1026
Y LPK LDEKVARL L KL V+L+KLTD+QA+YIGV GP+K D+YR
Sbjct: 383 YVLPKHLDEKVARLHLGKLGVKLTKLTDKQAEYIGVPVEGPFKPDHYR 430
|
Length = 430 |
| >gnl|CDD|233241 TIGR01034, metK, S-adenosylmethionine synthetase | Back alignment and domain information |
|---|
Score = 612 bits (1580), Expect = 0.0
Identities = 241/374 (64%), Positives = 295/374 (78%), Gaps = 5/374 (1%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVSEGHPDKIADQISDA+LD I +D KA+VA ET L+++ GEITT A +D +
Sbjct: 5 ESVSEGHPDKIADQISDAVLDAILKQDPKAKVACETFVKTGLVLIGGEITTSAYVDIQEV 64
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
R TIKDIGY + DYG D K+CAVL+ QS DIAQGV + +QGAGDQG+MFGY
Sbjct: 65 ARNTIKDIGYTDSDYGFDAKTCAVLVAIGNQSPDIAQGV-DKANPE-EQGAGDQGIMFGY 122
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNGKPVAIDTIVL 367
A +ETPELMP I +H ++KR +ELRK+G LPWLRPD KSQVT++Y++ KPV +DTIVL
Sbjct: 123 ATNETPELMPLPITLAHKLLKRAAELRKSGTLPWLRPDGKSQVTVQYEDNKPVRVDTIVL 182
Query: 368 STQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKGDCGLTGRK 426
STQHDP+I + ++EA IEEII+P++P L + T++ INPTGRFVIGGP GD GLTGRK
Sbjct: 183 STQHDPDISQKDLREAIIEEIIKPVLPAEYLDEKTKFFINPTGRFVIGGPMGDTGLTGRK 242
Query: 427 IIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVA 486
IIVDTYGG A HGGGAFSGKDPSK+DRSAAY RYIAKNIVAA LA RC++Q+SYAIGVA
Sbjct: 243 IIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYIAKNIVAAGLADRCEVQLSYAIGVA 302
Query: 487 KPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEP 546
+P SIM+ +FG+ K S+E+L +VK++FDLRP II+ L+LL+PIY+KT+VYGHFGR+
Sbjct: 303 EPVSIMIETFGTSKKSEEELLNVVKENFDLRPGGIIEKLDLLKPIYRKTAVYGHFGRE-- 360
Query: 547 EFTWELTDKAEVLK 560
EF WE DK E LK
Sbjct: 361 EFPWEKPDKLEELK 374
|
Tandem isozymes of this S-adenosylmethionine synthetase in E. coli are designated MetK and MetX [Central intermediary metabolism, Other]. Length = 377 |
| >gnl|CDD|178111 PLN02494, PLN02494, adenosylhomocysteinase | Back alignment and domain information |
|---|
Score = 612 bits (1580), Expect = 0.0
Identities = 276/479 (57%), Positives = 335/479 (69%), Gaps = 15/479 (3%)
Query: 561 NSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAV 620
+ ++ + D++ + +GR EIE+AE EM L++ R EF S+P KGARI+GS+HMTIQTAV
Sbjct: 2 SGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTIQTAV 61
Query: 621 LIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPG 680
LIETL LGAEVRW SCNI+STQDHAAAAIA VFA+KGE++ +YW R DW
Sbjct: 62 LIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGP 121
Query: 681 NSNTEQANMILDDGGDATFLLHLGAQAENNIS---ILSNPCS---EEEVCLFKSIKNKLK 734
++I+DDGGDAT L+H G +AE L +P S E + IK+ LK
Sbjct: 122 G---GGPDLIVDDGGDATLLIHEGVKAEEEFEKDGTLPDPTSTDNAEFKIVLTIIKDGLK 178
Query: 735 IDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRE 794
+D K Y +++ GV+EETTTGV RL +M K G L FPAINVNDSVTKSKFDNLYGCR
Sbjct: 179 VDPKKYHKMKERLVGVSEETTTGVKRLYQMQKNGTLLFPAINVNDSVTKSKFDNLYGCRH 238
Query: 795 SLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGF 854
SL DG+ RATDVMIAGK+AVI GYGDVGKG A AM+A A+V + EIDPICALQA MEG+
Sbjct: 239 SLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGY 298
Query: 855 LVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKY--- 911
V+T+E DIFVT TGN +I DHMR MK+ AIVCNIGHFDNEI++ L+ Y
Sbjct: 299 QVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGV 358
Query: 912 KWENIKPQVDHIIFPD-GKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFN- 969
K IKPQ D +FPD G II+LAEGRL+NLGC TGHPS+VMS SF NQ +AQ+EL+N
Sbjct: 359 KRITIKPQTDRWVFPDTGSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNE 418
Query: 970 -NTSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
+ Y +Y LPK LDEKVA L L KL +L+KL+ QA YI V GPYK +YRY
Sbjct: 419 KKSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYINVPVEGPYKPAHYRY 477
|
Length = 477 |
| >gnl|CDD|213572 TIGR00936, ahcY, adenosylhomocysteinase | Back alignment and domain information |
|---|
Score = 582 bits (1501), Expect = 0.0
Identities = 222/448 (49%), Positives = 283/448 (63%), Gaps = 45/448 (10%)
Query: 575 WGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRW 634
GRK+IE AE EM L+ IRE F + KPLKGARI+ +H+T++TAVLIETL GAEV W
Sbjct: 2 EGRKKIEWAEREMPVLMRIRERFSEEKPLKGARIAACLHVTVETAVLIETLVAGGAEVAW 61
Query: 635 SSCNIYSTQDHAAAAIA-SKGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDD 693
+SCN STQD AAA+A GIPVFA++GE+ +Y+ ++ D + N+I+DD
Sbjct: 62 TSCNPLSTQDDVAAALAKGAGIPVFAWRGETNEEYYWAIEQVLD-------HEPNIIIDD 114
Query: 694 GGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEE 753
G D FLLH L++I G +EE
Sbjct: 115 GADLIFLLH-----------------------------------TERPELLEKIIGGSEE 139
Query: 754 TTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKIA 813
TTTGV RLR M EG L FPAINVND+ TKS FDN YG +S IDGI RAT+++IAGK
Sbjct: 140 TTTGVIRLRAMEAEGVLKFPAINVNDAYTKSLFDNRYGTGQSTIDGILRATNLLIAGKTV 199
Query: 814 VIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCT 873
V+ GYG GKG A R + A+V + E+DPI AL+AAM+GF V+TME A K GDIF+T T
Sbjct: 200 VVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKIGDIFITAT 259
Query: 874 GNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWE--NIKPQVDHIIFPDGKKI 931
GN VI +H +MKD AIV NIGHFD EI+V+ L++ E N++PQVD I DG++I
Sbjct: 260 GNKDVIRGEHFENMKDGAIVANIGHFDVEIDVKALEELAVEKVNVRPQVDEYILKDGRRI 319
Query: 932 ILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIYTLPKILDEKVAR 991
LLAEGRLVNL GHPS VM SFANQ LA L+ N G+Y LPK LDE VAR
Sbjct: 320 YLLAEGRLVNLAAAEGHPSEVMDMSFANQALAAEYLWKNHDKLEPGVYRLPKELDEMVAR 379
Query: 992 LQLKKLNVQLSKLTDQQAKYIGVSKNGP 1019
L+L+ + +++ +LT++Q +Y+G + G
Sbjct: 380 LKLEAMGIEIDELTEEQKEYLGSWEEGT 407
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704) [Energy metabolism, Amino acids and amines]. Length = 407 |
| >gnl|CDD|237106 PRK12459, PRK12459, S-adenosylmethionine synthetase; Provisional | Back alignment and domain information |
|---|
Score = 579 bits (1494), Expect = 0.0
Identities = 218/377 (57%), Positives = 278/377 (73%), Gaps = 8/377 (2%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESV+EGHPDK+ DQISDAILD +D +RVA E L + +++++GEIT+ A +D I
Sbjct: 9 ESVTEGHPDKLCDQISDAILDACLRQDPASRVACEVLVSTGIVIVAGEITSSAKVDIEKI 68
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFD---QGAGDQGLM 304
VR IK+IGY+ + G D ++C VL+ +QS DIAQGV+ EG + + GAGDQG M
Sbjct: 69 VRNVIKEIGYDEL--GFDPRTCTVLVSLGEQSPDIAQGVDTAEGRDEELEELGAGDQGTM 126
Query: 305 FGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNGKPVAIDT 364
FGYACDETPELMP I +H + KR + RK+G LP L PD K+QVT+ Y++G+PV +DT
Sbjct: 127 FGYACDETPELMPLPIVLAHRLAKRLDQARKDGLLPGLLPDGKTQVTVEYEDGRPVRVDT 186
Query: 365 IVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLLKN-TRYLINPTGRFVIGGPKGDCGLT 423
IV+S QHD + +++ IE +I+P+ L + TR LINPTGRFV+GGP D GLT
Sbjct: 187 IVVSAQHDESVDLETLRRDVIENVIKPVFEDFWLDDETRILINPTGRFVVGGPAADTGLT 246
Query: 424 GRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAI 483
GRKI+VDTYGG A HGGGAFSGKDPSK+DRSAAY RYIAKNIVAA LAKRC++Q+SYAI
Sbjct: 247 GRKIMVDTYGGYARHGGGAFSGKDPSKVDRSAAYAARYIAKNIVAAGLAKRCEVQLSYAI 306
Query: 484 GVAKPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGR 543
G A+P S+ V +FG+G +SDE+LT V++HFDLRP II+ LNL PIY+KT+ YGHFGR
Sbjct: 307 GKARPVSVQVNTFGTGTVSDEELTRAVREHFDLRPAGIIEKLNLRNPIYRKTAAYGHFGR 366
Query: 544 KEPEFTWELTDKAEVLK 560
F WE TDKA +L+
Sbjct: 367 --TLFPWEKTDKAALLR 381
|
Length = 386 |
| >gnl|CDD|240268 PTZ00104, PTZ00104, S-adenosylmethionine synthase; Provisional | Back alignment and domain information |
|---|
Score = 550 bits (1419), Expect = 0.0
Identities = 217/372 (58%), Positives = 277/372 (74%), Gaps = 9/372 (2%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVSEGHPDK+ DQISDA+LD +D ++VA ET ++++ GEITT A +DY +
Sbjct: 16 ESVSEGHPDKLCDQISDAVLDACLAQDPLSKVACETCAKTGMVMVFGEITTKAVVDYQKV 75
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
VR T+K+IGY++ + G+DYK+C VL+ +QS DIAQGV+ G+ D GAGDQG+MFGY
Sbjct: 76 VRDTVKEIGYDDTEKGLDYKTCNVLVAIEQQSPDIAQGVHVGKKEE-DIGAGDQGIMFGY 134
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNG-----KPVAI 362
A DET ELMP + + KR SELRKNG LPWLRPDAK+QVT+ Y+ P +
Sbjct: 135 ATDETEELMPLTHELATKLAKRLSELRKNGILPWLRPDAKTQVTVEYEYDTRGGLTPKRV 194
Query: 363 DTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKGDCG 421
TI++STQHD + I+E +E +I+P+IP LL + T+Y +NP+GRFVIGGP GD G
Sbjct: 195 HTILISTQHDEGVSNEEIREDLMEHVIKPVIPAKLLDEETKYHLNPSGRFVIGGPHGDAG 254
Query: 422 LTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISY 481
LTGRKIIVDTYGG HGGGAFSGKDPSK+DRSAAY R+IAK++VAA L KRC +Q+SY
Sbjct: 255 LTGRKIIVDTYGGWGAHGGGAFSGKDPSKVDRSAAYAARWIAKSLVAAGLCKRCLVQVSY 314
Query: 482 AIGVAKPTSIMVTSFGSGK--ISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYG 539
AIGVA+P SI V ++G+GK DE L +V+K+FDLRP +IIK L+L RPI++KT+ YG
Sbjct: 315 AIGVAEPLSIHVNTYGTGKKGYDDEDLLEIVQKNFDLRPGDIIKELDLRRPIFQKTASYG 374
Query: 540 HFGRKEPEFTWE 551
HFGR +PEFTWE
Sbjct: 375 HFGRSDPEFTWE 386
|
Length = 398 |
| >gnl|CDD|177886 PLN02243, PLN02243, S-adenosylmethionine synthase | Back alignment and domain information |
|---|
Score = 463 bits (1193), Expect = e-155
Identities = 193/377 (51%), Positives = 260/377 (68%), Gaps = 9/377 (2%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESV+EGHPDK+ DQISDA+LD +D ++VA ET N++++ GEITT A +DY I
Sbjct: 9 ESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKAKVDYEKI 68
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVN-EGEGLNFDQGAGDQGLMFG 306
VR T ++IG+ + D G+D C VL+ +QS DIAQGV+ + GAGDQG MFG
Sbjct: 69 VRDTCREIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFG 128
Query: 307 YACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNGK----PVAI 362
YA DETPELMP + + R +E+RKNG PWLRPD K+QVT+ Y N P+ +
Sbjct: 129 YATDETPELMPLTHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYKNEGGAMVPIRV 188
Query: 363 DTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKGDCG 421
T+++STQHD + I E +I+P+IP+ L + T + +NP+GRFVIGGP GD G
Sbjct: 189 HTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAG 248
Query: 422 LTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISY 481
LTGRKII+DTYGG HGGGAFSGKDP+K+DRS AY+ R AK++VAA LA+RC +Q+SY
Sbjct: 249 LTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVAAGLARRCIVQVSY 308
Query: 482 AIGVAKPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLR---PIYKKTSVY 538
AIGV +P S+ V ++G+GKI D+++ +VK++FD RP I L+L R ++KT+ Y
Sbjct: 309 AIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFQKTAAY 368
Query: 539 GHFGRKEPEFTWELTDK 555
GHFGR +P+FTWE+
Sbjct: 369 GHFGRDDPDFTWEVVKP 385
|
Length = 386 |
| >gnl|CDD|109716 pfam00670, AdoHcyase_NAD, S-adenosyl-L-homocysteine hydrolase, NAD binding domain | Back alignment and domain information |
|---|
Score = 297 bits (763), Expect = 5e-95
Identities = 116/162 (71%), Positives = 128/162 (79%), Gaps = 2/162 (1%)
Query: 788 NLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICAL 847
NLYGCRESLIDGIKRATDVMIAGK+AV+ GYGDVGKG A +++ A+V + EIDPICAL
Sbjct: 1 NLYGCRESLIDGIKRATDVMIAGKVAVVCGYGDVGKGCAASLKGQGARVIVTEIDPICAL 60
Query: 848 QAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEK 907
QAAMEGF VVT+E K DIFVT TGN +IT +HM MK+ AIVCNIGHFDNEI+V
Sbjct: 61 QAAMEGFQVVTLEEVVKKADIFVTTTGNKDIITGEHMAKMKNDAIVCNIGHFDNEIDVAW 120
Query: 908 LKKY--KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTG 947
L KWENIKPQVD PDGK IILLAEGRLVNLGC TG
Sbjct: 121 LNTNGKKWENIKPQVDRYTLPDGKHIILLAEGRLVNLGCATG 162
|
Length = 162 |
| >gnl|CDD|198065 smart00997, AdoHcyase_NAD, S-adenosyl-L-homocysteine hydrolase, NAD binding domain | Back alignment and domain information |
|---|
Score = 296 bits (761), Expect = 1e-94
Identities = 95/162 (58%), Positives = 115/162 (70%), Gaps = 2/162 (1%)
Query: 788 NLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICAL 847
N YG ESL+DGI RAT+V++AGK V+ GYGDVGKG A +R L A+V + EIDPI AL
Sbjct: 1 NRYGTGESLLDGILRATNVLLAGKNVVVAGYGDVGKGVAARLRGLGARVIVTEIDPIRAL 60
Query: 848 QAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEK 907
+AAM+GF V+ ME A K DIFVT TGN VIT +H R MKD AI+ N GHFD EI+V
Sbjct: 61 EAAMDGFEVMKMEEAAKRADIFVTATGNKDVITREHFRAMKDGAILANAGHFDVEIDVAA 120
Query: 908 LKKY--KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTG 947
L++ + ++PQVD PDGK+I LLAEGRLVNL TG
Sbjct: 121 LEELAVEKREVRPQVDEYTLPDGKRIYLLAEGRLVNLAAATG 162
|
Length = 162 |
| >gnl|CDD|111646 pfam02773, S-AdoMet_synt_C, S-adenosylmethionine synthetase, C-terminal domain | Back alignment and domain information |
|---|
Score = 252 bits (646), Expect = 1e-78
Identities = 91/139 (65%), Positives = 117/139 (84%), Gaps = 2/139 (1%)
Query: 413 IGGPKGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLA 472
IGGP+GD GLTGRKIIVDTYGG HGGGAFSGKDP+K+DRSAAY R++AK++VAA LA
Sbjct: 1 IGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVAAGLA 60
Query: 473 KRCQIQISYAIGVAKPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIY 532
+RC +Q+SYAIGVA+P SIMV ++G+ K S+E+L +V+K+FDLRP I+KML+L +PIY
Sbjct: 61 RRCLVQVSYAIGVAEPLSIMVDTYGTSKKSEEELLEIVRKNFDLRPGVIVKMLDLKKPIY 120
Query: 533 KKTSVYGHFGRKEPEFTWE 551
++T+ YGHFGR +F WE
Sbjct: 121 QQTAAYGHFGRD--DFPWE 137
|
The three domains of S-adenosylmethionine synthetase have the same alpha+beta fold. Length = 138 |
| >gnl|CDD|217221 pfam02772, S-AdoMet_synt_M, S-adenosylmethionine synthetase, central domain | Back alignment and domain information |
|---|
Score = 231 bits (591), Expect = 4e-71
Identities = 71/118 (60%), Positives = 97/118 (82%), Gaps = 1/118 (0%)
Query: 295 DQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRY 354
+ GAGDQG+MFGYA +ETPELMP I +H +++R +ELRKNG LP+LRPD KSQVT+ Y
Sbjct: 2 EIGAGDQGIMFGYATNETPELMPLPIVLAHRLLRRLAELRKNGTLPYLRPDGKSQVTVEY 61
Query: 355 DNGKPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRF 411
++GKPV +DT+V+STQHDP++ ++E IEE+I+P++P+ LL +T+YLINPTGRF
Sbjct: 62 EDGKPVRVDTVVVSTQHDPDVSLEELREDIIEEVIKPVLPEELLDDDTKYLINPTGRF 119
|
The three domains of S-adenosylmethionine synthetase have the same alpha+beta fold. Length = 119 |
| >gnl|CDD|201226 pfam00438, S-AdoMet_synt_N, S-adenosylmethionine synthetase, N-terminal domain | Back alignment and domain information |
|---|
Score = 162 bits (412), Expect = 6e-47
Identities = 53/92 (57%), Positives = 67/92 (72%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVSEGHPDKI DQISDAILD +D +RVA ETL L+V++GEITT A +D I
Sbjct: 8 ESVSEGHPDKICDQISDAILDAFLAQDPNSRVACETLVTTGLVVVAGEITTSAYVDIEKI 67
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQS 279
VR+ IKDIGY++ + G D +CAVL+ ++QS
Sbjct: 68 VREVIKDIGYDSSELGFDADTCAVLVSIHEQS 99
|
The three domains of S-adenosylmethionine synthetase have the same alpha+beta fold. Length = 100 |
| >gnl|CDD|240631 cd12154, FDH_GDH_like, Formate/glycerate dehydrogenases, D-specific 2-hydroxy acid dehydrogenases and related dehydrogenases | Back alignment and domain information |
|---|
Score = 166 bits (422), Expect = 1e-45
Identities = 69/382 (18%), Positives = 111/382 (29%), Gaps = 94/382 (24%)
Query: 608 ISGSIHMTIQTA------VLIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFK 661
I+G + + ++ TL G EVR + A + + I V K
Sbjct: 1 IAGPKEIKNEEFRVGLSPSVVATLVEAGHEVRVETGAGIGAGFADQAYVQAGAIVVTLAK 60
Query: 662 GESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEE 721
+++L T
Sbjct: 61 ALW---------------------SLDVVLKVKEPLTNA--------------------- 78
Query: 722 EVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSV 781
E L + + + T +R + AI V
Sbjct: 79 EYALIQ----------------KLGDRLLFTYTIGADHRDLTEAL-ARAGLTAIAVEGVE 121
Query: 782 TKSKFDNLYGCRESLIDGIKRATDV----------MIAGKIAVIIGYGDVGKGSAQAMRA 831
N G E + I R +V +AGK V++G G VGK +AQ +R
Sbjct: 122 LPLLTSNSIGAGELSVQFIARFLEVQQPGRLGGAPDVAGKTVVVVGAGVVGKEAAQMLRG 181
Query: 832 LSAQVWIIEIDPICALQAAMEG-FLVVTMEYAKKYGDIFVTCTG-----NYHVITHDHMR 885
L AQV I +I+ Q G V +E A D+ VT T ++ + +
Sbjct: 182 LGAQVLITDINVEALEQLEELGGKNVEELEEALAEADVIVTTTLLPGKRAGILVPEELVE 241
Query: 886 DMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCG 945
MK +++ N+ V+ L E G ++ + + GC
Sbjct: 242 QMKPGSVIVNVAVGAVG-CVQALHTQLLEE------------GHGVVHYGDVNMPGPGCA 288
Query: 946 TGHPSYVMSSSFANQTLAQIEL 967
G P AN A ++L
Sbjct: 289 MGVPWDATLRLAANTLPALVKL 310
|
The formate/glycerate dehydrogenase like family contains a diverse group of enzymes such as formate dehydrogenase (FDH), glycerate dehydrogenase (GDH), D-lactate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine hydrolase, that share a common 2-domain structure. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar domains of the alpha/beta Rossmann fold NAD+ binding form. The NAD(P) binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD(P) is bound, primarily to the C-terminal portion of the 2nd (internal) domain. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. 2-hydroxyacid dehydrogenases are enzymes that catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of a hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. Length = 310 |
| >gnl|CDD|225496 COG2945, COG2945, Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 158 bits (401), Expect = 5e-44
Identities = 74/203 (36%), Positives = 110/203 (54%), Gaps = 9/203 (4%)
Query: 10 INGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISI 69
ING G L + + LI HPHPLFGGTM+NKVVQTL R ++ G+ ++
Sbjct: 9 INGPAGRLEGRYEPAKT----PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATL 64
Query: 70 RMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPII-LAGFSFGTFVQAKL-QKR 127
R NFRGVG S G +D+G GE +D L ++Q ++P LAGFSFG ++ +L +R
Sbjct: 65 RFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRR 124
Query: 128 LDKEISIKILILISVAVKKWLIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVVVIP 187
+ + I IL I+ +L P P ++I G+ D+++ L V W + I V+ IP
Sbjct: 125 PEILVFISILPPINAYDFSFLAP-CPSPGLVIQGDADDVVDLVAVLKWQESIKITVITIP 183
Query: 188 ESVS--EGHPDKIADQISDAILD 208
+ G ++ D I+D + D
Sbjct: 184 GADHFFHGKLIELRDTIADFLED 206
|
Length = 210 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 2e-10
Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 15/138 (10%)
Query: 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDME 94
+V++ H G D + L R + S GY + +++ G GAS G D E
Sbjct: 1 LVVLLH-----GAGGDPEAYAPLARALASRGYNVVAVDYPGHGASLGA--------PDAE 47
Query: 95 ILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWLIPEVPK 154
+L I+L G S G V L R + + +L + ++
Sbjct: 48 AVLA--DAPLDPERIVLVGHSLGGGVALLLAARDPRVKAAVVLAAGDPPDALDDLAKLTV 105
Query: 155 NTIIIHGELDEIIPLKDV 172
+IIHG D ++P ++
Sbjct: 106 PVLIIHGTRDGVVPPEEA 123
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 6e-09
Identities = 39/195 (20%), Positives = 69/195 (35%), Gaps = 39/195 (20%)
Query: 36 VLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEI 95
V++ H G + + L L+ GY + + G G S G + DD
Sbjct: 1 VVLLH-----GAGGSAESWRPLAE-ALAAGYRVLAPDLPGHGDSDGPPRTPYSLEDDAAD 54
Query: 96 LLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW-------- 147
L + P++L G S G V R + + L+LIS ++
Sbjct: 55 LAALL-DALGLGPVVLVGHSLGGAVALAAAARRPERV--AGLVLISPPLRDLEELLAADA 111
Query: 148 ------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPL-DIPVVVIPE 188
+ + ++IHGE D ++P + A L +VV+P
Sbjct: 112 AALLALLRAALLDADLREALARLTVPVLVIHGEDDPLVPPEAARRLAEALPGAELVVLPG 171
Query: 189 S---VSEGHPDKIAD 200
+ HP+++A+
Sbjct: 172 AGHLPHLEHPEEVAE 186
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|240625 cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase | Back alignment and domain information |
|---|
Score = 47.1 bits (113), Expect = 2e-05
Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 32/108 (29%)
Query: 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVW------------IIEIDPICALQAAMEG-- 853
+AGK +I+G GD+G+ A+ +A +V + E+ L +
Sbjct: 132 LAGKTVLIVGLGDIGREIARRAKAFGMRVIGVRRSGRPAPPVVDEVYTPDELDELLPEAD 191
Query: 854 FLVVTM----EYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIG 897
++V + E T + + MK A++ N+G
Sbjct: 192 YVVNALPLTPE----------T----RGLFNAERFAAMKPGAVLINVG 225
|
2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomains but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of the hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Length = 313 |
| >gnl|CDD|217244 pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Score = 40.9 bits (97), Expect = 0.001
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGD 867
++GK IIG G +G+ A+ ++A +V I D +A G V+++ D
Sbjct: 33 LSGKTVGIIGLGRIGRAVARRLKAFGMKV--IAYDRYPKAEAEALGARYVSLDELLAESD 90
Query: 868 IFVTCT----GNYHVITHDHMRDMKDQAIVCNIG 897
+ H+I + + MK AI+ N
Sbjct: 91 VVSLHLPLTPETRHLINAERLALMKPGAILINTA 124
|
This domain is inserted into the catalytic domain, the large dehydrogenase and D-lactate dehydrogenase families in SCOP. N-terminal portion of which is represented by family pfam00389. Length = 175 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1027 | |||
| COG0192 | 388 | MetK S-adenosylmethionine synthetase [Coenzyme met | 100.0 | |
| TIGR01034 | 377 | metK S-adenosylmethionine synthetase. Tandem isozy | 100.0 | |
| PRK05250 | 384 | S-adenosylmethionine synthetase; Validated | 100.0 | |
| PRK12459 | 386 | S-adenosylmethionine synthetase; Provisional | 100.0 | |
| PLN02243 | 386 | S-adenosylmethionine synthase | 100.0 | |
| PTZ00104 | 398 | S-adenosylmethionine synthase; Provisional | 100.0 | |
| KOG1506|consensus | 383 | 100.0 | ||
| COG0499 | 420 | SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me | 100.0 | |
| KOG1370|consensus | 434 | 100.0 | ||
| PLN02494 | 477 | adenosylhomocysteinase | 100.0 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 100.0 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 100.0 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 100.0 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 100.0 | |
| PF05221 | 268 | AdoHcyase: S-adenosyl-L-homocysteine hydrolase; In | 100.0 | |
| PF02773 | 138 | S-AdoMet_synt_C: S-adenosylmethionine synthetase, | 100.0 | |
| PF02772 | 120 | S-AdoMet_synt_M: S-adenosylmethionine synthetase, | 100.0 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 100.0 | |
| PF00438 | 100 | S-AdoMet_synt_N: S-adenosylmethionine synthetase, | 99.91 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.82 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.78 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.78 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.77 | |
| KOG1455|consensus | 313 | 99.76 | ||
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.74 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.71 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.71 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.69 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.68 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.66 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.64 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.63 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.63 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.63 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.62 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.62 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.6 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.59 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.59 | |
| PLN02511 | 388 | hydrolase | 99.59 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.58 | |
| KOG1552|consensus | 258 | 99.56 | ||
| PRK10985 | 324 | putative hydrolase; Provisional | 99.56 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.56 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.55 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 99.55 | |
| PRK10566 | 249 | esterase; Provisional | 99.53 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.53 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.53 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.53 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.52 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.52 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.52 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.51 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.51 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.5 | |
| PLN02578 | 354 | hydrolase | 99.49 | |
| KOG4391|consensus | 300 | 99.49 | ||
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.49 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.49 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 99.47 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.47 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.46 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.44 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.44 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.44 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.44 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.43 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.41 | |
| KOG1454|consensus | 326 | 99.4 | ||
| PRK11071 | 190 | esterase YqiA; Provisional | 99.4 | |
| KOG4178|consensus | 322 | 99.39 | ||
| KOG4667|consensus | 269 | 99.39 | ||
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.38 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.37 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.37 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.37 | |
| COG1052 | 324 | LdhA Lactate dehydrogenase and related dehydrogena | 99.36 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.36 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.32 | |
| PRK15409 | 323 | bifunctional glyoxylate/hydroxypyruvate reductase | 99.32 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 99.32 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.31 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.3 | |
| PRK06487 | 317 | glycerate dehydrogenase; Provisional | 99.27 | |
| PLN02928 | 347 | oxidoreductase family protein | 99.24 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.24 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.23 | |
| PRK06932 | 314 | glycerate dehydrogenase; Provisional | 99.23 | |
| PLN00021 | 313 | chlorophyllase | 99.2 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 99.2 | |
| PLN02306 | 386 | hydroxypyruvate reductase | 99.2 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 99.2 | |
| KOG1838|consensus | 409 | 99.2 | ||
| KOG0068|consensus | 406 | 99.19 | ||
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.19 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.19 | |
| PRK15438 | 378 | erythronate-4-phosphate dehydrogenase PdxB; Provis | 99.19 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.18 | |
| PRK11790 | 409 | D-3-phosphoglycerate dehydrogenase; Provisional | 99.18 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.17 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.16 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 99.16 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 99.14 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.14 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.12 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.12 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 99.1 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.1 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 99.1 | |
| PRK00257 | 381 | erythronate-4-phosphate dehydrogenase; Validated | 99.1 | |
| TIGR01327 | 525 | PGDH D-3-phosphoglycerate dehydrogenase. This mode | 99.09 | |
| PRK13581 | 526 | D-3-phosphoglycerate dehydrogenase; Provisional | 99.09 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.06 | |
| KOG4409|consensus | 365 | 99.05 | ||
| KOG2564|consensus | 343 | 99.04 | ||
| PRK10115 | 686 | protease 2; Provisional | 99.03 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.03 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.01 | |
| KOG2382|consensus | 315 | 98.99 | ||
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 98.99 | |
| KOG0069|consensus | 336 | 98.97 | ||
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 98.97 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 98.95 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 98.93 | |
| KOG0024|consensus | 354 | 98.92 | ||
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 98.92 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 98.91 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.9 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 98.88 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 98.87 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 98.86 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 98.86 | |
| PRK08605 | 332 | D-lactate dehydrogenase; Validated | 98.86 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 98.78 | |
| KOG2984|consensus | 277 | 98.76 | ||
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 98.71 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 98.69 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 98.69 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 98.66 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 98.65 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 98.65 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 98.65 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 98.63 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 98.61 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 98.6 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.6 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 98.59 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 98.58 | |
| PF07991 | 165 | IlvN: Acetohydroxy acid isomeroreductase, catalyti | 98.54 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 98.53 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 98.52 | |
| KOG2281|consensus | 867 | 98.52 | ||
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 98.5 | |
| KOG3043|consensus | 242 | 98.49 | ||
| TIGR01202 | 308 | bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl | 98.48 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.47 | |
| KOG2624|consensus | 403 | 98.47 | ||
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 98.46 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 98.45 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 98.45 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 98.43 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.42 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.41 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.41 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 98.41 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 98.39 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 98.37 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 98.36 | |
| KOG2100|consensus | 755 | 98.35 | ||
| KOG1553|consensus | 517 | 98.33 | ||
| COG1062 | 366 | AdhC Zn-dependent alcohol dehydrogenases, class II | 98.31 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 98.31 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 98.3 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 98.28 | |
| KOG4627|consensus | 270 | 98.27 | ||
| PRK05225 | 487 | ketol-acid reductoisomerase; Validated | 98.26 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 98.24 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.24 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 98.23 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 98.23 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 98.22 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 98.22 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.22 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.21 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.21 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 98.2 | |
| PRK05479 | 330 | ketol-acid reductoisomerase; Provisional | 98.2 | |
| KOG2551|consensus | 230 | 98.2 | ||
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 98.19 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 98.19 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 98.19 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.18 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 98.17 | |
| cd01079 | 197 | NAD_bind_m-THF_DH NAD binding domain of methylene- | 98.17 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.16 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 98.16 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.16 | |
| PRK14170 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.13 | |
| PRK14169 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.13 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.13 | |
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.12 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.12 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 98.11 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 98.11 | |
| PRK14166 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.11 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 98.11 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.09 | |
| PRK14171 | 288 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.09 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.09 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.08 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 98.08 | |
| PRK14187 | 294 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.08 | |
| PRK14183 | 281 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.07 | |
| PRK14186 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.07 | |
| PLN02516 | 299 | methylenetetrahydrofolate dehydrogenase (NADP+) | 98.07 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.07 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.07 | |
| PLN02897 | 345 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 98.06 | |
| PLN02616 | 364 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 98.06 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 98.06 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 98.05 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 98.05 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.05 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 98.04 | |
| PRK14178 | 279 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.04 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 98.04 | |
| cd05191 | 86 | NAD_bind_amino_acid_DH NAD(P) binding domain of am | 98.04 | |
| PRK14182 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.04 | |
| cd08237 | 341 | ribitol-5-phosphate_DH ribitol-5-phosphate dehydro | 98.04 | |
| PRK14181 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.04 | |
| TIGR02822 | 329 | adh_fam_2 zinc-binding alcohol dehydrogenase famil | 98.03 | |
| PRK14193 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.02 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 98.02 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.02 | |
| PRK14184 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.0 | |
| PRK14185 | 293 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.98 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.98 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 97.98 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 97.95 | |
| KOG1515|consensus | 336 | 97.94 | ||
| PRK14167 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.94 | |
| COG0190 | 283 | FolD 5,10-methylene-tetrahydrofolate dehydrogenase | 97.93 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 97.93 | |
| PRK14168 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.93 | |
| TIGR00465 | 314 | ilvC ketol-acid reductoisomerase. This is the seco | 97.92 | |
| PRK14174 | 295 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.91 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 97.91 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 97.9 | |
| COG0059 | 338 | IlvC Ketol-acid reductoisomerase [Amino acid trans | 97.9 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.9 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 97.84 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 97.83 | |
| KOG0022|consensus | 375 | 97.83 | ||
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 97.83 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 97.81 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 97.8 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 97.8 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 97.8 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 97.79 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 97.78 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 97.78 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 97.72 | |
| PLN02514 | 357 | cinnamyl-alcohol dehydrogenase | 97.72 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 97.71 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 97.71 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 97.7 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 97.67 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 97.65 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 97.63 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 97.63 | |
| KOG0023|consensus | 360 | 97.62 | ||
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.62 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 97.61 | |
| PRK04439 | 399 | S-adenosylmethionine synthetase; Provisional | 97.57 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 97.56 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 97.55 | |
| PLN02712 | 667 | arogenate dehydrogenase | 97.55 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 97.55 | |
| PF01941 | 396 | AdoMet_Synthase: S-adenosylmethionine synthetase ( | 97.55 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 97.54 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 97.54 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 97.53 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 97.52 | |
| cd01076 | 227 | NAD_bind_1_Glu_DH NAD(P) binding domain of glutama | 97.51 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 97.51 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 97.5 | |
| KOG3847|consensus | 399 | 97.48 | ||
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 97.47 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 97.46 | |
| PRK10083 | 339 | putative oxidoreductase; Provisional | 97.45 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 97.44 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 97.43 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.42 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.41 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.39 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 97.39 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 97.38 | |
| PLN02256 | 304 | arogenate dehydrogenase | 97.36 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 97.35 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 97.35 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 97.34 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 97.34 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 97.33 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 97.33 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.32 | |
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 97.31 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.31 | |
| cd08242 | 319 | MDR_like Medium chain dehydrogenases/reductase (MD | 97.31 | |
| KOG2112|consensus | 206 | 97.31 | ||
| cd08296 | 333 | CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci | 97.29 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 97.27 | |
| cd05313 | 254 | NAD_bind_2_Glu_DH NAD(P) binding domain of glutama | 97.27 | |
| PRK14031 | 444 | glutamate dehydrogenase; Provisional | 97.26 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.25 | |
| PRK12861 | 764 | malic enzyme; Reviewed | 97.25 | |
| KOG3975|consensus | 301 | 97.24 | ||
| cd08265 | 384 | Zn_ADH3 Alcohol dehydrogenases of the MDR family. | 97.23 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 97.22 | |
| TIGR02992 | 326 | ectoine_eutC ectoine utilization protein EutC. Mem | 97.22 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 97.21 | |
| TIGR00670 | 301 | asp_carb_tr aspartate carbamoyltransferase. Ornith | 97.21 | |
| PRK12862 | 763 | malic enzyme; Reviewed | 97.2 | |
| KOG2931|consensus | 326 | 97.2 | ||
| TIGR02371 | 325 | ala_DH_arch alanine dehydrogenase, Archaeoglobus f | 97.2 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 97.18 | |
| cd05211 | 217 | NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of | 97.16 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 97.14 | |
| PRK09414 | 445 | glutamate dehydrogenase; Provisional | 97.14 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 97.14 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 97.13 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.11 | |
| PRK14030 | 445 | glutamate dehydrogenase; Provisional | 97.11 | |
| PLN02712 | 667 | arogenate dehydrogenase | 97.1 | |
| PRK07232 | 752 | bifunctional malic enzyme oxidoreductase/phosphotr | 97.09 | |
| PRK06545 | 359 | prephenate dehydrogenase; Validated | 97.08 | |
| PRK00779 | 304 | ornithine carbamoyltransferase; Provisional | 97.07 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 97.06 | |
| PRK08507 | 275 | prephenate dehydrogenase; Validated | 97.06 | |
| PRK08268 | 507 | 3-hydroxy-acyl-CoA dehydrogenase; Validated | 97.05 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.03 | |
| PLN02527 | 306 | aspartate carbamoyltransferase | 97.03 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.03 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 97.03 | |
| TIGR01692 | 288 | HIBADH 3-hydroxyisobutyrate dehydrogenase. This en | 97.02 | |
| PRK06823 | 315 | ornithine cyclodeaminase; Validated | 97.02 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 97.01 | |
| PRK06141 | 314 | ornithine cyclodeaminase; Validated | 97.01 | |
| PLN02477 | 410 | glutamate dehydrogenase | 97.0 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 97.0 | |
| PTZ00079 | 454 | NADP-specific glutamate dehydrogenase; Provisional | 97.0 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 97.0 | |
| cd08299 | 373 | alcohol_DH_class_I_II_IV class I, II, IV alcohol d | 96.99 | |
| PRK15059 | 292 | tartronate semialdehyde reductase; Provisional | 96.97 | |
| cd08285 | 351 | NADP_ADH NADP(H)-dependent alcohol dehydrogenases. | 96.96 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.96 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.95 | |
| TIGR01546 | 333 | GAPDH-II_archae glyceraldehyde-3-phosphate dehydro | 96.94 | |
| COG0281 | 432 | SfcA Malic enzyme [Energy production and conversio | 96.94 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.93 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 96.92 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.91 | |
| TIGR02279 | 503 | PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa | 96.91 | |
| PRK06046 | 326 | alanine dehydrogenase; Validated | 96.89 | |
| cd08284 | 344 | FDH_like_2 Glutathione-dependent formaldehyde dehy | 96.89 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.88 | |
| cd08283 | 386 | FDH_like_1 Glutathione-dependent formaldehyde dehy | 96.87 | |
| PRK02102 | 331 | ornithine carbamoyltransferase; Validated | 96.86 | |
| PRK06407 | 301 | ornithine cyclodeaminase; Provisional | 96.86 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.85 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 96.85 | |
| PF00208 | 244 | ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Val | 96.85 | |
| PF02423 | 313 | OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst | 96.84 | |
| KOG2565|consensus | 469 | 96.83 | ||
| cd08287 | 345 | FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik | 96.83 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 96.82 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 96.79 | |
| COG0334 | 411 | GdhA Glutamate dehydrogenase/leucine dehydrogenase | 96.76 | |
| cd08256 | 350 | Zn_ADH2 Alcohol dehydrogenases of the MDR family. | 96.76 | |
| PRK11891 | 429 | aspartate carbamoyltransferase; Provisional | 96.74 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 96.74 | |
| PRK00856 | 305 | pyrB aspartate carbamoyltransferase catalytic subu | 96.73 | |
| cd05279 | 365 | Zn_ADH1 Liver alcohol dehydrogenase and related zi | 96.73 | |
| cd08255 | 277 | 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ | 96.72 | |
| PRK05808 | 282 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.71 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 96.71 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 96.7 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 96.69 | |
| PRK01713 | 334 | ornithine carbamoyltransferase; Provisional | 96.69 | |
| PRK03515 | 336 | ornithine carbamoyltransferase subunit I; Provisio | 96.69 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.68 | |
| PRK05562 | 223 | precorrin-2 dehydrogenase; Provisional | 96.67 | |
| PLN02342 | 348 | ornithine carbamoyltransferase | 96.67 | |
| cd05283 | 337 | CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam | 96.67 | |
| COG1712 | 255 | Predicted dinucleotide-utilizing enzyme [General f | 96.66 | |
| PRK04284 | 332 | ornithine carbamoyltransferase; Provisional | 96.66 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 96.66 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 96.66 | |
| PRK07589 | 346 | ornithine cyclodeaminase; Validated | 96.65 | |
| KOG3101|consensus | 283 | 96.64 | ||
| cd05281 | 341 | TDH Threonine dehydrogenase. L-threonine dehydroge | 96.64 | |
| cd08278 | 365 | benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be | 96.64 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.64 | |
| cd08254 | 338 | hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo | 96.63 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 96.63 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.63 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.62 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 96.61 | |
| cd08282 | 375 | PFDH_like Pseudomonas putida aldehyde-dismutating | 96.61 | |
| cd08262 | 341 | Zn_ADH8 Alcohol dehydrogenases of the MDR family. | 96.6 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 96.6 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 96.59 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 96.57 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 96.57 | |
| PRK08291 | 330 | ectoine utilization protein EutC; Validated | 96.57 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 96.55 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 96.55 | |
| KOG2237|consensus | 712 | 96.54 | ||
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 96.54 | |
| cd05284 | 340 | arabinose_DH_like D-arabinose dehydrogenase. This | 96.52 | |
| cd08232 | 339 | idonate-5-DH L-idonate 5-dehydrogenase. L-idonate | 96.51 | |
| cd05312 | 279 | NAD_bind_1_malic_enz NAD(P) binding domain of mali | 96.51 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.5 | |
| cd08234 | 334 | threonine_DH_like L-threonine dehydrogenase. L-thr | 96.5 | |
| cd08286 | 345 | FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik | 96.49 | |
| PRK14806 | 735 | bifunctional cyclohexadienyl dehydrogenase/ 3-phos | 96.49 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 96.48 | |
| TIGR00658 | 304 | orni_carb_tr ornithine carbamoyltransferase. Most | 96.46 | |
| KOG0067|consensus | 435 | 96.45 | ||
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 96.43 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.42 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 96.42 | |
| cd08270 | 305 | MDR4 Medium chain dehydrogenases/reductase (MDR)/z | 96.39 | |
| PRK14805 | 302 | ornithine carbamoyltransferase; Provisional | 96.38 | |
| PRK02255 | 338 | putrescine carbamoyltransferase; Provisional | 96.38 | |
| PRK12562 | 334 | ornithine carbamoyltransferase subunit F; Provisio | 96.38 | |
| PRK12491 | 272 | pyrroline-5-carboxylate reductase; Reviewed | 96.38 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 96.35 | |
| PRK10637 | 457 | cysG siroheme synthase; Provisional | 96.35 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.35 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 96.34 | |
| COG2423 | 330 | Predicted ornithine cyclodeaminase, mu-crystallin | 96.33 | |
| PRK00676 | 338 | hemA glutamyl-tRNA reductase; Validated | 96.31 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 96.31 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 96.29 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 96.27 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 96.27 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 96.26 | |
| cd08260 | 345 | Zn_ADH6 Alcohol dehydrogenases of the MDR family. | 96.26 | |
| PRK13814 | 310 | pyrB aspartate carbamoyltransferase catalytic subu | 96.25 | |
| cd08245 | 330 | CAD Cinnamyl alcohol dehydrogenases (CAD) and rela | 96.24 | |
| PRK07680 | 273 | late competence protein ComER; Validated | 96.24 | |
| cd08240 | 350 | 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy | 96.24 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 96.23 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 96.22 | |
| PLN02702 | 364 | L-idonate 5-dehydrogenase | 96.21 | |
| KOG3253|consensus | 784 | 96.21 | ||
| cd08269 | 312 | Zn_ADH9 Alcohol dehydrogenases of the MDR family. | 96.2 | |
| COG1648 | 210 | CysG Siroheme synthase (precorrin-2 oxidase/ferroc | 96.19 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.18 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 96.16 | |
| PRK12771 | 564 | putative glutamate synthase (NADPH) small subunit; | 96.16 | |
| cd08252 | 336 | AL_MDR Arginate lyase and other MDR family members | 96.15 | |
| COG3288 | 356 | PntA NAD/NADP transhydrogenase alpha subunit [Ener | 96.15 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 96.14 | |
| cd00762 | 254 | NAD_bind_malic_enz NAD(P) binding domain of malic | 96.13 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.11 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 96.11 | |
| cd08298 | 329 | CAD2 Cinnamyl alcohol dehydrogenases (CAD). These | 96.11 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 96.1 | |
| TIGR01724 | 341 | hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome | 96.1 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.09 | |
| TIGR02823 | 323 | oxido_YhdH putative quinone oxidoreductase, YhdH/Y | 96.08 | |
| PTZ00317 | 559 | NADP-dependent malic enzyme; Provisional | 96.04 | |
| cd08263 | 367 | Zn_ADH10 Alcohol dehydrogenases of the MDR family. | 96.04 | |
| TIGR00692 | 340 | tdh L-threonine 3-dehydrogenase. E. coli His-90 mo | 96.03 | |
| cd08279 | 363 | Zn_ADH_class_III Class III alcohol dehydrogenase. | 96.02 | |
| PRK05396 | 341 | tdh L-threonine 3-dehydrogenase; Validated | 96.0 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 96.0 | |
| cd05285 | 343 | sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a | 95.99 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 95.99 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 95.99 | |
| PRK06199 | 379 | ornithine cyclodeaminase; Validated | 95.99 | |
| PRK15182 | 425 | Vi polysaccharide biosynthesis protein TviB; Provi | 95.98 | |
| PRK06476 | 258 | pyrroline-5-carboxylate reductase; Reviewed | 95.96 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 95.93 | |
| KOG4230|consensus | 935 | 95.93 | ||
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 95.93 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 95.92 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 95.84 | |
| PRK09422 | 338 | ethanol-active dehydrogenase/acetaldehyde-active r | 95.8 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.79 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 95.78 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 95.77 | |
| PRK13529 | 563 | malate dehydrogenase; Provisional | 95.77 | |
| KOG0089|consensus | 309 | 95.76 | ||
| COG0345 | 266 | ProC Pyrroline-5-carboxylate reductase [Amino acid | 95.75 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 95.75 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 95.72 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 95.69 |
| >COG0192 MetK S-adenosylmethionine synthetase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-158 Score=1266.38 Aligned_cols=382 Identities=65% Similarity=1.079 Sum_probs=373.1
Q ss_pred ceEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCC
Q psy15208 182 PVVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNID 261 (1027)
Q Consensus 182 ~~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~ 261 (1027)
..+|++|++++|||||+||||+|+|+|++|++||++|+||||++++|+|+|+|||+|++++|+++++|++|++|||+..+
T Consensus 4 ~~lFTSESVseGHPDKi~DqISDaILD~~L~~Dp~srVAcEt~v~tg~v~i~GEitt~~~vd~~~~~r~~I~~IGY~~~~ 83 (388)
T COG0192 4 YFLFTSESVSEGHPDKICDQISDAILDAILKQDPNSRVACETLVTTGLVVIAGEITTSAYVDIVNIARKTIKEIGYTESD 83 (388)
T ss_pred cceeeeccccCCCChHHHHHHhHHHHHHHHhcCCCceEEEEEEEecCeEEEEEEEecCccccHHHHHHHHHHHhCCCccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCC
Q psy15208 262 YGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPW 341 (1027)
Q Consensus 262 ~g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~~ 341 (1027)
+|||+++|+|+++|++|||||+|||++..++.+++|||||||||||||||||+||||||+|||+|++|++++||+|.+||
T Consensus 84 ~Gfd~~t~~vl~~i~~QSpDIaqgVd~~~~~~~~~GAGDQGimFGyA~~ET~~lMPlpI~lAH~l~~r~a~~Rk~g~l~~ 163 (388)
T COG0192 84 YGFDAKTCAVLVAIGEQSPDIAQGVDEADEELDEIGAGDQGIMFGYACNETPELMPLPISLAHRLLRRLAEVRKNGELPW 163 (388)
T ss_pred cCcCccceEEEeecccCChhHHHhhhhcccchhhcCCCcceeEeeeecCCcccccChHHHHHHHHHHHHHHHHhcCCCcc
Confidence 99999999999999999999999999875444579999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEec-CCceeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecCCCCc
Q psy15208 342 LRPDAKSQVTLRYD-NGKPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKGD 419 (1027)
Q Consensus 342 ~~pd~k~qv~~~y~-~~~~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~ggp~~d 419 (1027)
||||+||||||+|+ +++|++|++||+||||++++++++||+.++|+||+|++|++++ ++|+|+||||||||||||+||
T Consensus 164 LrpD~KsQVtv~Y~~~~~p~~idtIvvStQH~~~i~~~~l~~~v~e~iI~pv~~~~~l~~~tk~~INPtGrFViGGP~gD 243 (388)
T COG0192 164 LRPDAKSQVTVEYEDNGKPVRIDTIVVSTQHDPDISQEQLREDVIEEIIKPVLPEELLDDKTKYFINPTGRFVIGGPQGD 243 (388)
T ss_pred cCCCcceeEEEEEcCCCCceeEEEEEEEeccCcccCHHHHHHHHHHHHHhhhccHhhcCcCceEEECCCCCeeeCCCCcc
Confidence 99999999999999 5999999999999999999999999999999999999999887 689999999999999999999
Q ss_pred cccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEeecCCC
Q psy15208 420 CGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTSFGSG 499 (1027)
Q Consensus 420 ~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~~~t~ 499 (1027)
||||||||||||||||+|||||||||||||||||||||+||||||||||||||+|||||||||||+++|+||+||||||+
T Consensus 244 ~GLTGRKIIVDTYGG~a~HGGGAFSGKDptKVDRSaAYaARyvAKNiVAAglA~~ceVQlsYAIGva~PvSi~VdtfgT~ 323 (388)
T COG0192 244 AGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADRCEVQLSYAIGVAEPVSISVDTFGTG 323 (388)
T ss_pred ccCccceEEEEcCCCccCCCCccCCCCCCcccchHHHHHHHHHHHHHHHhhhhhheEEEEEeEecccCceEEEEEccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHhhhcccCC
Q psy15208 500 KISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAEVLKNSAD 564 (1027)
Q Consensus 500 ~~~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~~~~~~~~ 564 (1027)
++|+++|+++|+++|||||++||++|+|++|||++||+||||||++ +|||||+||++.||+++.
T Consensus 324 kvse~~i~~~v~~~FdlrP~gIi~~LdL~~piY~~tAaYGHFGr~~-~~pWEk~dkv~~lk~~~~ 387 (388)
T COG0192 324 KVSEEKIEEAVRKVFDLRPAGIIKMLDLLRPIYRKTAAYGHFGRED-DFPWEKLDKVDELKKAAK 387 (388)
T ss_pred ccCHHHHHHHHHHhcCCCHHHHHHHhccCCccchhcccccccCCCC-CCCccchhhHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999997 899999999999998753
|
|
| >TIGR01034 metK S-adenosylmethionine synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-152 Score=1244.80 Aligned_cols=376 Identities=64% Similarity=1.060 Sum_probs=366.2
Q ss_pred EeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCCCC
Q psy15208 184 VVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNIDYG 263 (1027)
Q Consensus 184 L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~~g 263 (1027)
+|++|++++|||||+||+|+|+++|++|++||++|+||||++++++|+|+|||||++++|+++|||++|++|||+++++|
T Consensus 1 lfTSESV~eGHPDKicDqISDaILD~~L~~Dp~srVA~Et~v~~~~V~i~GEitt~~~vd~~~ivR~~i~~IGY~~~~~g 80 (377)
T TIGR01034 1 LFTSESVSEGHPDKIADQISDAVLDAILKQDPKAKVACETFVKTGLVLIGGEITTSAYVDIQEVARNTIKDIGYTDSDYG 80 (377)
T ss_pred CCccCcCCCCCCcHHHHHHHHHHHHHHHhhCCCCcEEEEEEeecCeEEEEEEEcCCccCCHHHHHHHHHHHhCCCCcccC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCC
Q psy15208 264 IDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLR 343 (1027)
Q Consensus 264 ~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~~~~ 343 (1027)
||+++|.+++.|++|||||+|||+++.. +++|||||||||||||||||+||||||+|||+|++||+++||+|.+||||
T Consensus 81 fd~~t~~v~~~i~~QSpDIa~gV~~~~~--~~iGAGDQGimfGYA~~ET~e~MPl~i~lAh~l~~~l~~~Rk~g~~~~l~ 158 (377)
T TIGR01034 81 FDAKTCAVLVAIGNQSPDIAQGVDKANP--EEQGAGDQGIMFGYATNETPELMPLPITLAHKLLKRAAELRKSGTLPWLR 158 (377)
T ss_pred CCCCceEEEecCCCCChHHHhccccCcc--ccCCCCcceeeeeeecCCCcccCChHHHHHHHHHHHHHHHHhcCCCCeec
Confidence 9999999999999999999999985421 35899999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEEEecCCceeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecCCCCcccc
Q psy15208 344 PDAKSQVTLRYDNGKPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKGDCGL 422 (1027)
Q Consensus 344 pd~k~qv~~~y~~~~~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~ggp~~d~gl 422 (1027)
|||||||||+|++++|+||+|||||+||++++++++++++|+++||+|++|++++ ++|+||||||||||+|||.|||||
T Consensus 159 PD~KtQVtveY~~~~P~rv~tivvS~QH~~~v~~~~l~~~i~~~vi~~v~~~~~~~~~t~~~INPtGrFviGGP~gDtGL 238 (377)
T TIGR01034 159 PDGKSQVTVQYEDNKPVRVDTIVLSTQHDPDISQKDLREAIIEEIIKPVLPAEYLDEKTKFFINPTGRFVIGGPMGDTGL 238 (377)
T ss_pred CCCceEEEEEEECCceeEEEEEEEecCCCCCCCHHHHHHHHHHHHhHHhcCcccCCCCcEEEECCCCCeEeCCCcccccc
Confidence 9999999999999999999999999999999999999999999999999998887 579999999999999999999999
Q ss_pred CCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEeecCCCCCC
Q psy15208 423 TGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTSFGSGKIS 502 (1027)
Q Consensus 423 tgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~~~t~~~~ 502 (1027)
|||||||||||||++|||||||||||||||||||||||||||||||||||+|||||||||||+++||||+||||||++++
T Consensus 239 TGRKIiVDTYGG~~~hGGGAFSGKDptKVDRSaAY~AR~iAKniVaAgla~~c~VQlsYaIGva~Pvsi~V~tfGT~~~~ 318 (377)
T TIGR01034 239 TGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYIAKNIVAAGLADRCEVQLSYAIGVAEPVSIMIETFGTSKKS 318 (377)
T ss_pred ccceEEEeccCcccccCCccccCCCcchhhhHHHHHHHHHHHHHHhhcCcceeEEEEEEEcCcCCCceEEEEcCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHhhhcccC
Q psy15208 503 DEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAEVLKNSA 563 (1027)
Q Consensus 503 ~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~~~~~~~ 563 (1027)
+++|.++|+++|||||++||++|+|++|||++||+||||||+ +||||++||++.||+++
T Consensus 319 ~~~i~~~v~~~FdlrP~~Ii~~L~L~~piY~~ta~yGHFGr~--~~~WE~~d~~~~l~~~~ 377 (377)
T TIGR01034 319 EEELLNVVKENFDLRPGGIIEKLDLLKPIYRKTAVYGHFGRE--EFPWEKPDKLEELKRAL 377 (377)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHhCCCCchhhhhcccCCCCCC--CCCccccchHHHHHhhC
Confidence 999999999999999999999999999999999999999997 69999999999998653
|
Tandem isozymes of this S-adenosylmethionine synthetase in E. coli are designated MetK and MetX. |
| >PRK05250 S-adenosylmethionine synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-152 Score=1248.88 Aligned_cols=379 Identities=65% Similarity=1.067 Sum_probs=370.2
Q ss_pred eEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCCC
Q psy15208 183 VVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNIDY 262 (1027)
Q Consensus 183 ~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~~ 262 (1027)
++|++|++++|||||+||+|+|+++|++|++||++|+||||++++++|+|+|||+|++++|++++||++|++|||++.++
T Consensus 3 ~lfTSESV~eGHPDKicDqISDaILD~~L~~Dp~srVA~Et~v~~~~V~i~GEitt~a~vD~~~ivR~~i~~IGY~~~~~ 82 (384)
T PRK05250 3 YLFTSESVSEGHPDKIADQISDAILDAILAQDPNARVACETLVTTGLVVVAGEITTSAYVDIEEIVRETIKEIGYTSSEY 82 (384)
T ss_pred ceEeecCCCCCCCcHHHHHHHHHHHHHHHhhCCCCcEEEEEEeecCeEEEEEEEeCCccCCHHHHHHHHHHHcCCCCccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCC
Q psy15208 263 GIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWL 342 (1027)
Q Consensus 263 g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~~~ 342 (1027)
|||+++|.|++.|++|||||+|||++.+. +++|||||||||||||||||+|||||++|||+|+++|+++||+|.+|||
T Consensus 83 gfd~~~~~v~~~i~~QSpdIa~gV~~~~~--~~~GAGDQGimfGYA~~ET~~~MPl~i~lAh~l~~~l~~~Rk~~~~~~l 160 (384)
T PRK05250 83 GFDANTCAVLVSIGEQSPDIAQGVDRDEL--DEIGAGDQGIMFGYACNETPELMPLPITLAHRLVRRLAEVRKSGTLPYL 160 (384)
T ss_pred CcCCCceEEEeecCCCChhHHhhhCcccc--ccCCCCCceeeeeeecCCCcccCChHHHHHHHHHHHHHHHHhcCCCCee
Confidence 99999999999999999999999986432 3689999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEecCCceeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecCCCCccc
Q psy15208 343 RPDAKSQVTLRYDNGKPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKGDCG 421 (1027)
Q Consensus 343 ~pd~k~qv~~~y~~~~~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~ggp~~d~g 421 (1027)
||||||||||+|++++|+||++||||+||+++++++++|++|+|+||+|++|++|+ ++|+|+||||||||||||.||||
T Consensus 161 ~PD~KtQVtv~Y~~~~p~~i~tiviS~QH~~~~~~~~l~~~i~e~vi~~v~~~~~~~~~t~~~INPtG~FviGGP~gDtG 240 (384)
T PRK05250 161 RPDAKSQVTVEYENGKPVRIDTIVVSTQHDPDVSQEQLREDVIEEVIKPVLPAELLDEDTKFLINPTGRFVIGGPQGDAG 240 (384)
T ss_pred cCCCceEEEEEEECCceeeEEEEEEeccCCCCCCHHHHHHHHHHHHhHHhcccccCCCCeEEEECCCCCeEeCCCccccc
Confidence 99999999999999999999999999999999999999999999999999998888 57999999999999999999999
Q ss_pred cCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEeecCCCCC
Q psy15208 422 LTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTSFGSGKI 501 (1027)
Q Consensus 422 ltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~~~t~~~ 501 (1027)
||||||||||||||++|||||||||||||||||||||||||||||||||||+|||||||||||+++||||+||||||+++
T Consensus 241 LTGRKIiVDTYGG~a~hGGGAFSGKDptKVDRSaAY~AR~iAKniVaaglA~~ceVQlsYAIGva~Pvsi~VdtfGt~~~ 320 (384)
T PRK05250 241 LTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADRCEVQLSYAIGVAEPVSIYVDTFGTGKV 320 (384)
T ss_pred ccCceEEEEcCCcccccCCccccCCCcchhhhHHHHHHHHHHHHHHhhcCCCceEEEEEEeeccccCceEEEecCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHhhhcccC
Q psy15208 502 SDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAEVLKNSA 563 (1027)
Q Consensus 502 ~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~~~~~~~ 563 (1027)
++++|+++|+++|||||++||++|+|++|||++||+||||||++++||||++||++.|++..
T Consensus 321 ~~~~i~~~v~~~Fdl~P~~Ii~~L~L~~piY~~ta~yGHFGr~~~~fpWE~~d~v~~l~~~~ 382 (384)
T PRK05250 321 SDEKIEEAVREVFDLRPAGIIKMLDLRRPIYRKTAAYGHFGREDLDFPWEKTDKVEALKAAA 382 (384)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHhCCCCccchhhcccCCCCCCCCCCCCcccchHHHHHHHh
Confidence 99999999999999999999999999999999999999999998889999999999998654
|
|
| >PRK12459 S-adenosylmethionine synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-151 Score=1243.25 Aligned_cols=377 Identities=58% Similarity=0.974 Sum_probs=365.4
Q ss_pred eEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCCC
Q psy15208 183 VVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNIDY 262 (1027)
Q Consensus 183 ~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~~ 262 (1027)
++|++|++++|||||+||+|+|+|+|++|++||.+|+||||++++++|+|+|||+|++++|+++|||++|++|||+ ++
T Consensus 4 ~lfTSESV~eGHPDKicDqISDaILDa~L~qDp~srVA~Et~v~~~~V~v~GEitt~a~vdi~~ivR~~i~~IGY~--~~ 81 (386)
T PRK12459 4 FLFTSESVTEGHPDKLCDQISDAILDACLRQDPASRVACEVLVSTGIVIVAGEITSSAKVDIEKIVRNVIKEIGYD--EL 81 (386)
T ss_pred eeEEecCCCCCCccHHHhhHHHHHHHHHHhhCCCCcEEEEEEeecCeEEEEEEEccCccCCHHHHHHHHHHHhCCC--CC
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999999 89
Q ss_pred CccccceEEEEeeccCChhhhhccccCCC---CCcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC
Q psy15208 263 GIDYKSCAVLLIYNKQSLDIAQGVNEGEG---LNFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNL 339 (1027)
Q Consensus 263 g~~~~~~~~~~~i~~qs~~i~~~v~~~~~---~~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~ 339 (1027)
|||+++|.|++.|++|||||+|||+...+ ..+++|||||||||||||||||+||||||+|||+|+++|+++||+|.+
T Consensus 82 gfd~~t~~v~~~i~~QSpdIa~gV~~~~~~~~~~~~iGAGDQGimfGYA~~ET~~~MPlpi~lAh~l~~~l~~~Rk~g~~ 161 (386)
T PRK12459 82 GFDPRTCTVLVSLGEQSPDIAQGVDTAEGRDEELEELGAGDQGTMFGYACDETPELMPLPIVLAHRLAKRLDQARKDGLL 161 (386)
T ss_pred CCCCCceEEEeccccCChhHhcccccccccccccccCCCCcceEeeeeecCCCcccCChHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999974321 113589999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeEEEEecCCceeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecCCCC
Q psy15208 340 PWLRPDAKSQVTLRYDNGKPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKG 418 (1027)
Q Consensus 340 ~~~~pd~k~qv~~~y~~~~~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~ggp~~ 418 (1027)
|||||||||||||+|++++|+||+|||||+||++++++++++++|+++||+|++|++++ ++|+||||||||||||||+|
T Consensus 162 ~~l~PD~KsQVtv~Y~~~~P~rv~tivvS~QH~~~v~~~~~~~~i~e~vi~~v~~~~~~~~~t~~~INPtGrFviGGP~g 241 (386)
T PRK12459 162 PGLLPDGKTQVTVEYEDGRPVRVDTIVVSAQHDESVDLETLRRDVIENVIKPVFEDFWLDDETRILINPTGRFVVGGPAA 241 (386)
T ss_pred CeecCCCceEEEEEeeCCceeEEEEEEEeeccCCCCCHHHHHHHHHHHHHHHhcCcccCCCCcEEEECCCCCeEeCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999887 57999999999999999999
Q ss_pred ccccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEeecCC
Q psy15208 419 DCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTSFGS 498 (1027)
Q Consensus 419 d~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~~~t 498 (1027)
|||||||||||||||||++|||||||||||||||||||||||||||||||||||+|||||||||||+++||||+||||||
T Consensus 242 D~GLTGRKIiVDTYGG~~~HGGGAFSGKDptKVDRSaAY~AR~iAKniVaAGlA~~ceVQlsYAIGva~Pvsi~V~TfGT 321 (386)
T PRK12459 242 DTGLTGRKIMVDTYGGYARHGGGAFSGKDPSKVDRSAAYAARYIAKNIVAAGLAKRCEVQLSYAIGKARPVSVQVNTFGT 321 (386)
T ss_pred cccccCceEEEEcCCcccccCCccccCCCcchhhhHHHHHHHHHHHHHHhhcCccceEEEEEEeecccccceEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHhhhcccC
Q psy15208 499 GKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAEVLKNSA 563 (1027)
Q Consensus 499 ~~~~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~~~~~~~ 563 (1027)
+++++++|+++|+++|||||++||++|+|++|||++||+||||||+ +||||++||++.|+++.
T Consensus 322 ~~~~~~~i~~~i~~~Fdl~P~~Ii~~L~L~~piY~~ta~yGHFGr~--~f~WE~~d~~~~l~~~~ 384 (386)
T PRK12459 322 GTVSDEELTRAVREHFDLRPAGIIEKLNLRNPIYRKTAAYGHFGRT--LFPWEKTDKAALLRAAV 384 (386)
T ss_pred CCCCHHHHHHHHHHHcCCCHHHHHHHcCCCCchhhhhcccCCCCCC--CCCcccccHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999997 59999999999998654
|
|
| >PLN02243 S-adenosylmethionine synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-150 Score=1232.90 Aligned_cols=374 Identities=52% Similarity=0.896 Sum_probs=362.3
Q ss_pred eEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCCC
Q psy15208 183 VVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNIDY 262 (1027)
Q Consensus 183 ~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~~ 262 (1027)
++|++|++++|||||+||+|+|+++|++|++||++|+||||++++++|+|+|||+|++++|+++|||++|++|||+++++
T Consensus 4 ~lfTSESV~eGHPDKicDqISDaILDa~L~qDp~srVA~Et~v~~~~V~i~GEitt~a~vd~~~ivR~~i~~IGY~~~~~ 83 (386)
T PLN02243 4 FLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCREIGFVSDDV 83 (386)
T ss_pred eEEEecCCCCCCChHHHHHHHHHHHHHHHhhCCCCcEEEEEEEECCEEEEEEEECCCCcCCHHHHHHHHHHHhCCCCccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceEEEEeeccCChhhhhccccCCCC-CcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCC
Q psy15208 263 GIDYKSCAVLLIYNKQSLDIAQGVNEGEGL-NFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPW 341 (1027)
Q Consensus 263 g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~-~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~~ 341 (1027)
|||+++|.|++.|++|||||+|||+.+.+. .+++|||||||||||||||||+||||||+|||+|+++|+++||+|.+||
T Consensus 84 gfd~~t~~v~~~i~~QSpdIa~gV~~~~~~~~~~iGAGDQGimfGYA~~ET~e~MPlpi~lAh~l~~~l~~~Rk~~~~~~ 163 (386)
T PLN02243 84 GLDADKCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGARLTEVRKNGTCPW 163 (386)
T ss_pred CcCCCceEEEecCCCCChhHhhccccccccccccCCCCcceEEeeeecCCCcccCChHHHHHHHHHHHHHHHHhcCCCCe
Confidence 999999999999999999999999854211 1358999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEecC--Cc--eeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecCC
Q psy15208 342 LRPDAKSQVTLRYDN--GK--PVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGP 416 (1027)
Q Consensus 342 ~~pd~k~qv~~~y~~--~~--~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~ggp 416 (1027)
|||||||||||+|++ ++ |+||++||||+||+++++++++|++|+++||+|++|++++ ++|+|+||||||||+|||
T Consensus 164 l~PD~KsQVtv~Y~~~~~~~~p~rv~tivvS~QH~~~v~~~~l~~~i~e~vi~~v~~~~~~~~~t~~~INPtGrFviGGP 243 (386)
T PLN02243 164 LRPDGKTQVTVEYKNEGGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGP 243 (386)
T ss_pred ecCCCceEEEEEeecCCCCccceeEeEEEEeeccCCCCCHHHHHHHHHHHHhHHhcCcccCCCCcEEEECCCCCeEeCCC
Confidence 999999999999965 67 9999999999999999999999999999999999998877 579999999999999999
Q ss_pred CCccccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEeec
Q psy15208 417 KGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTSF 496 (1027)
Q Consensus 417 ~~d~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~~ 496 (1027)
.||||||||||||||||||++|||||||||||||||||||||||||||||||||||+|||||||||||+++||||+||||
T Consensus 244 ~~D~GLTGRKIiVDTYGG~~~hGGGAFSGKDptKVDRSaAY~AR~iAKniVaaglA~rceVQlsYAIGva~Pvsi~V~Tf 323 (386)
T PLN02243 244 HGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVAAGLARRCIVQVSYAIGVPEPLSVFVDTY 323 (386)
T ss_pred cccccccCceEEEEcCCCccCCCCccccCCCcchhhhHHHHHHHHHHHHHHhhcCCCeeEEEEEEEcccCcCcEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCHHHHHHHhcCCc---chhhcccccccCCCCCCCCCcccchhH
Q psy15208 497 GSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLR---PIYKKTSVYGHFGRKEPEFTWELTDKA 556 (1027)
Q Consensus 497 ~t~~~~~~~~~~~~~~~f~~~~~~i~~~l~l~~---~~y~~~a~~ghfg~~~~~~~we~~~~~ 556 (1027)
||+++++++|.++|+++|||||++||++|+|++ |||++||+||||||++++||||++|++
T Consensus 324 GT~~~~d~~i~~~v~~~Fdlrp~~Ii~~L~L~~~~~piY~~ta~yGHFGr~~~~fpWE~~d~~ 386 (386)
T PLN02243 324 GTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWEVVKPL 386 (386)
T ss_pred CCCcCCHHHHHHHHHHHcCCCHHHHHHhcCCCCCCCCcchhccccCCCCCCCCCCCccccCCC
Confidence 999999999999999999999999999999999 999999999999999889999999974
|
|
| >PTZ00104 S-adenosylmethionine synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-150 Score=1237.20 Aligned_cols=376 Identities=58% Similarity=0.979 Sum_probs=364.7
Q ss_pred ceEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCC
Q psy15208 182 PVVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNID 261 (1027)
Q Consensus 182 ~~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~ 261 (1027)
.++|++|++++|||||+||+|+|+|+|++|++||.||+||||++++++|+|+|||+|++++|+++|||++|++|||++++
T Consensus 10 ~~lfTSESVseGHPDKicDqISDaILD~~L~qDp~srVA~Et~v~~~~V~v~GEitt~a~vDi~~ivR~~i~~IGY~~~~ 89 (398)
T PTZ00104 10 HFLFTSESVSEGHPDKLCDQISDAVLDACLAQDPLSKVACETCAKTGMVMVFGEITTKAVVDYQKVVRDTVKEIGYDDTE 89 (398)
T ss_pred CEEEEecCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEEEeCCEEEEEEEEcCCccCCHHHHHHHHHHHhCCCCcc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCC
Q psy15208 262 YGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPW 341 (1027)
Q Consensus 262 ~g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~~ 341 (1027)
+|||+++|.|++.|++|||||+|||+.+.. .+++|||||||||||||||||+||||||+|||+|+++|+++||+|.+||
T Consensus 90 ~gfd~~t~~v~~~i~~QSpDIa~gV~~~~~-~~~iGAGDQGimfGYA~~ET~~~MPlpi~lAh~L~~~l~~~Rk~~~~~~ 168 (398)
T PTZ00104 90 KGLDYKTCNVLVAIEQQSPDIAQGVHVGKK-EEDIGAGDQGIMFGYATDETEELMPLTHELATKLAKRLSELRKNGILPW 168 (398)
T ss_pred cCcCCCceEEEecCCCCChhHhhccccccc-cccCCCCccceeeeeecCCCcccCCcHHHHHHHHHHHHHHHHhcCCCCe
Confidence 999999999999999999999999985422 1358999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEecC--C---ceeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecC
Q psy15208 342 LRPDAKSQVTLRYDN--G---KPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGG 415 (1027)
Q Consensus 342 ~~pd~k~qv~~~y~~--~---~~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~gg 415 (1027)
|||||||||||+|++ + +|+||++||||+||+++++++++|++|+++||+|++|++++ ++|+|||||||||||||
T Consensus 169 L~PD~KsQVtv~Y~~~~~~~~~P~~i~tivvS~QH~~~v~~~~l~~~i~~~vi~~v~~~~~~~~~t~~~INPtGrFviGG 248 (398)
T PTZ00104 169 LRPDAKTQVTVEYEYDTRGGLTPKRVHTILISTQHDEGVSNEEIREDLMEHVIKPVIPAKLLDEETKYHLNPSGRFVIGG 248 (398)
T ss_pred eccCCceEEEEEeccCCCCCccceeEEEEEEccccCCCCCHHHHHHHHHHHHHHHhcCcccCCCCcEEEECCCCCeEeCC
Confidence 999999999999965 2 99999999999999999999999999999999999998887 57999999999999999
Q ss_pred CCCccccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEee
Q psy15208 416 PKGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTS 495 (1027)
Q Consensus 416 p~~d~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~ 495 (1027)
|.||||||||||||||||||++|||||||||||||||||||||||||||||||||||+|||||||||||+++||||+|||
T Consensus 249 P~gDtGLTGRKIiVDTYGG~a~HGGGAFSGKDptKVDRSaAY~ARyiAKniVAAGlA~~ceVQlsYAIGva~Pvsi~V~T 328 (398)
T PTZ00104 249 PHGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPSKVDRSAAYAARWIAKSLVAAGLCKRCLVQVSYAIGVAEPLSIHVNT 328 (398)
T ss_pred CcccccccCceEEEEcCCCccCCCCccccCCCcchhhhHHHHHHHHHHHHHHhhccccceEEEEEEEcccCCCceeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCC--ChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHhh
Q psy15208 496 FGSGKI--SDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAEV 558 (1027)
Q Consensus 496 ~~t~~~--~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~~ 558 (1027)
|||+++ ++++|+++|+++|||||++||++|+|++|||++||+||||||++++||||++||++.
T Consensus 329 fGT~~~~~~~~~i~~~v~~~Fdl~P~~II~~L~L~~PiY~~ta~yGHFGr~~~~f~WE~~d~~~~ 393 (398)
T PTZ00104 329 YGTGKKGYDDEDLLEIVQKNFDLRPGDIIKELDLRRPIFQKTASYGHFGRSDPEFTWEVPKDLEH 393 (398)
T ss_pred CCCcccCCCHHHHHHHHHHHcCCCHHHHHHHhCCCChhhhhhhccCccCCCCCCCCccccchhcc
Confidence 999999 999999999999999999999999999999999999999999988899999999874
|
|
| >KOG1506|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-142 Score=1104.56 Aligned_cols=374 Identities=55% Similarity=0.950 Sum_probs=363.2
Q ss_pred CceEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCC
Q psy15208 181 IPVVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNI 260 (1027)
Q Consensus 181 ~~~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~ 260 (1027)
..++|++|++.+||||++||||+++++|++|++||++++||||.+++++|++.|||||+|.+||++++|++++.|||+++
T Consensus 4 ~tFLFTSESVgEGHPDKmCDQISDAiLDAhLkqDP~aKVACETv~KTgMiml~GEITska~vDYqkvVR~tik~IGydds 83 (383)
T KOG1506|consen 4 ETFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVTKTGMIMLCGEITSKAVVDYQKVVRDTIKKIGYDDS 83 (383)
T ss_pred ceeEEeeccccCCCchHHHHHHHHHHHHHHhhcCCCceeeeeeccccceEEEeeeccchhhhhHHHHHHHHHHHhCCccc
Confidence 35889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCC
Q psy15208 261 DYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLP 340 (1027)
Q Consensus 261 ~~g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~ 340 (1027)
..|||++||++++.|++|||||||||+-+++. +++||||||||||||||||||.|||++.|||+|..+|+++|++|++|
T Consensus 84 skGfD~ktcnvLvaieQQSPdIAqgvH~~k~~-edvGAGDQgimfGYATdet~e~mplt~~lahkln~~l~~~rr~g~l~ 162 (383)
T KOG1506|consen 84 SKGFDYKTCNVLVAIEQQSPDIAQGVHVDKDE-EDVGAGDQGIMFGYATDETPECMPLTIVLAHKLNAKLAELRRNGTLP 162 (383)
T ss_pred ccCccccccceeeeecccCchhhhcccccCCH-hHcCCCcceeEeeeecCCCccccchHHHHHHHHHHHHHhhcccCccc
Confidence 99999999999999999999999999976543 47999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEecC--C--ceeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecC
Q psy15208 341 WLRPDAKSQVTLRYDN--G--KPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGG 415 (1027)
Q Consensus 341 ~~~pd~k~qv~~~y~~--~--~~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~gg 415 (1027)
|||||+|||||++|.+ | .|.||||||||+||+++|+++++|++++|+||++|+|++++ ++|.|||||+|||||||
T Consensus 163 WlRpdsktqVTvey~~~~Ga~vP~rVhtvviS~QH~~~is~~~lr~~l~e~vik~viPa~~lDe~Tiyhl~PsGrFviGG 242 (383)
T KOG1506|consen 163 WLRPDSKTQVTVEYMNDNGAMVPLRVHTVVISTQHSEDITLDDLRAELKEKVIKPVIPAKYLDEKTIYHLNPSGRFVIGG 242 (383)
T ss_pred ccccCCcceEEEEEecCCCceeeeEEEEEEEecccCccccHHHHHHHHHHhhhhhcCcHhhcCccceEEecCCccEEecC
Confidence 9999999999999974 3 49999999999999999999999999999999999999988 57999999999999999
Q ss_pred CCCccccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEee
Q psy15208 416 PKGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTS 495 (1027)
Q Consensus 416 p~~d~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~ 495 (1027)
|+||+|||||||||||||||+.||||||||||||||||||||+|||+||++|+||||+||+||+|||||+++|+||+|+|
T Consensus 243 P~GDAGlTGRKIIvDtYGGwgahGGGAFSGKD~tKVDRSaAYaaRwvAkSlV~aGl~rR~lVQvSYAIGvaePlSv~v~~ 322 (383)
T KOG1506|consen 243 PQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVAAGLCRRCLVQVSYAIGVAEPLSVFVFT 322 (383)
T ss_pred CCcccccccceEEEeccCcccccCCcccCCCCccccchHHHHHHHHHHHHHHHhhhhhheeeEEeeeecCCCceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHh
Q psy15208 496 FGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAE 557 (1027)
Q Consensus 496 ~~t~~~~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~ 557 (1027)
|||+..++++|.++|++||||||+.|++.|+|+||||.+||+|||||+. +||||+..+++
T Consensus 323 ygTs~~s~~ell~iv~~nFDlrPG~ivk~LdLkrpiy~~Ta~yGHFg~~--~f~WE~pk~Lk 382 (383)
T KOG1506|consen 323 YGTSTKSDKELLEIVKKNFDLRPGMIVKNLDLKRPIYLKTAAYGHFGDQ--EFPWEVPKPLK 382 (383)
T ss_pred ccCCCCCHHHHHHHHHhccCCCCceEEeecccccccccccccccccCCC--CCCccccccCC
Confidence 9999999999999999999999999999999999999999999999986 59999987653
|
|
| >COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-136 Score=1105.75 Aligned_cols=416 Identities=59% Similarity=0.890 Sum_probs=408.7
Q ss_pred cCCceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCC
Q psy15208 562 SADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYS 641 (1027)
Q Consensus 562 ~~~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~s 641 (1027)
..+|+|||||||++|+++|+||++|||+||++|++|..+|||||.||++|||||+|||+|++||+++||||+|+||||||
T Consensus 2 ~~~y~v~Disla~~Gr~~i~wAe~~MP~L~~iR~~f~~~kPlkG~~i~~~lH~t~kTAvLietL~a~GAeV~~a~cNplS 81 (420)
T COG0499 2 GQDYKVKDISLADEGRKEIEWAEREMPVLMAIREEFAEEKPLKGARIAGCLHMTAKTAVLIETLKAGGAEVRWASCNPLS 81 (420)
T ss_pred CccceecchhhhhhhhHHHHHHHhhChHHHHHHHHHhhcCCCCccEEEEEEeehHHHHHHHHHHHhcCceEEEecCCCCc
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhC-CCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhccccccccccCCCCCCh
Q psy15208 642 TQDHAAAAIASK-GIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSE 720 (1027)
Q Consensus 642 tqd~~aaal~~~-g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~~~~~~~~~~ 720 (1027)
|||||||||+.. |||||||||||.||||||++++|+| .||+|||||||++.++|
T Consensus 82 TqD~vaaAl~~~~GipVfA~kGe~~eeY~~~~~~vl~~-------~p~iiiDDG~D~~~~vh------------------ 136 (420)
T COG0499 82 TQDDVAAALAAKEGIPVFAWKGETLEEYYEAIDQVLDW-------EPNIIIDDGGDLTKLVH------------------ 136 (420)
T ss_pred ccHHHHHHHhhccCceEEEEcCCCHHHHHHHHHHHhCc-------CCCEEEecCcceeeeee------------------
Confidence 999999999665 9999999999999999999999996 69999999999999999
Q ss_pred hHHHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHH
Q psy15208 721 EEVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGI 800 (1027)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i 800 (1027)
.++|++++.|+|++|||||||+|||+|+++|.|+||+|+||||.+|++|||+|||+||+||++
T Consensus 137 -----------------~~~~~l~~~i~G~tEETTTGV~RL~am~~~G~L~fPai~VNDs~tK~~FDNrYGtgqS~~DgI 199 (420)
T COG0499 137 -----------------LERPELLDAIKGGTEETTTGVHRLRAMEKDGVLKFPAINVNDSVTKSLFDNRYGTGQSLLDGI 199 (420)
T ss_pred -----------------cccHHHHHHhcCCCcccchHHHHHHHHHhcCCcccceEeecchhhhcccccccccchhHHHHH
Confidence 678999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCc
Q psy15208 801 KRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 801 ~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~ 880 (1027)
+|+||++++||+|||+||||||||+|++|+++||+|+|+|+||+|+++|.|+||+|++++++...+|||||||||+++|+
T Consensus 200 ~RaTn~liaGK~vVV~GYG~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~~m~~Aa~~gDifiT~TGnkdVi~ 279 (420)
T COG0499 200 LRATNVLLAGKNVVVAGYGWVGRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKTGDIFVTATGNKDVIR 279 (420)
T ss_pred HhhhceeecCceEEEecccccchHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEEEhHHhhhcCCEEEEccCCcCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhhcc--ceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEehhhH
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLKKY--KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFA 958 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~~~--~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~ 958 (1027)
.+||..||+|++++|+||||+|||.+.|.+. ++.++++++++|.++||++++||++||||||+|++|||++|||+||+
T Consensus 280 ~eh~~~MkDgaIl~N~GHFd~EI~~~~L~~~~~~~~~vr~~V~ey~l~~Gkri~llaeGRLvNLa~a~GHPs~VMd~SFa 359 (420)
T COG0499 280 KEHFEKMKDGAILANAGHFDVEIDVAGLEELAVEKREVRPQVDEYELPDGKRIILLAEGRLVNLAAATGHPSEVMDMSFA 359 (420)
T ss_pred HHHHHhccCCeEEecccccceeccHHHHHHhhhhHhccccCceEEEcCCCCEEEEEecceeeeeccCCCCcHHHhhhhHH
Confidence 9999999999999999999999999999854 88999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCC
Q psy15208 959 NQTLAQIELFNNTSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGP 1019 (1027)
Q Consensus 959 ~q~la~~~l~~~~~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~ 1019 (1027)
+|+||++||++++++|.++||.||+++|++||++||++||++||+||++|++||++|++||
T Consensus 360 nQaLa~~~L~~n~~~~~~~Vy~lP~~lD~~VArl~L~~~G~~i~~Lt~eQ~~Yl~~w~~Gt 420 (420)
T COG0499 360 NQALAQIYLVKNHGKLEPGVYRLPKELDEEVARLKLEAMGIELDELTEEQAEYLGSWEEGT 420 (420)
T ss_pred HHHHHHHHHHhcccccCCceeeCcHHHHHHHHHHHHHHhCceeeecCHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999997
|
|
| >KOG1370|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-134 Score=1060.63 Aligned_cols=427 Identities=65% Similarity=1.032 Sum_probs=420.0
Q ss_pred cCCceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCC
Q psy15208 562 SADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYS 641 (1027)
Q Consensus 562 ~~~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~s 641 (1027)
..+|+|+||+||+|||++|++||+|||+||++|++|+.+|||||+||++|+|||+|||||+|||.++||||+|+|||+||
T Consensus 5 ~~~ykv~~i~~aafGRkeieiAE~eMPglma~r~r~~~skPlkgArI~GClH~tvqTAVLiETLv~LGAev~WssCNIfS 84 (434)
T KOG1370|consen 5 SSNYKVKDISQAAFGRKEIEIAENEMPGLMALRKRYGPSKPLKGARIAGCLHMTVQTAVLIETLVALGAEVRWSSCNIFS 84 (434)
T ss_pred CCCceeeechhhhhchhhhhhhhhhcchHHHHHHHhccCCCCCCCeeeeeeeeehhHHHHHHHHHHhCceeeeeecceec
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhCCCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhccccccccccCCCCCChh
Q psy15208 642 TQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEE 721 (1027)
Q Consensus 642 tqd~~aaal~~~g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~~~~~~~~~~~ 721 (1027)
||||+||||++.|+|||||||||.||||||++|++. .++ ++||||||||||+++++|
T Consensus 85 TQdhaAAAiA~~g~Pvfawkget~ee~~wcie~~~~-~~g---~~~nmIlDdggd~t~l~h------------------- 141 (434)
T KOG1370|consen 85 TQDHAAAAIAEAGVPVFAWKGETEEEYWWCIERCLN-KDG---WQPNMILDDGGDLTHLVH------------------- 141 (434)
T ss_pred chhHHHHHHHhcCCceeeeccccchhhhhhhhhhhc-cCC---CCcceeecCCCchhhhhh-------------------
Confidence 999999999999999999999999999999999998 455 689999999999999999
Q ss_pred HHHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHHh
Q psy15208 722 EVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIK 801 (1027)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~ 801 (1027)
++||++++.+.|++||||||||||++|.++|.|.+|+||||||.+|++|||.|||++|+.|+++
T Consensus 142 ----------------~kyp~~~~~i~GiseEttTGVH~Lykm~k~G~L~VPAiNVNDSVTKsKFDnLygcreSl~Dgik 205 (434)
T KOG1370|consen 142 ----------------EKYPQMFKKIRGISEETTTGVHNLYKMSKNGKLKVPAINVNDSVTKSKFDNLYGCRESLLDGIK 205 (434)
T ss_pred ----------------hhhHHHHhhhcccchhhhhhHHHHHHHHhCCceecceeeccchhhhhhccccccchhhhhhhhh
Confidence 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcH
Q psy15208 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITH 881 (1027)
Q Consensus 802 r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~ 881 (1027)
|+|+++++||.+||.|||.+|++||+.||++|++|+|+|+||++++||.|+||+|.+++|++.++||||++||++++|..
T Consensus 206 raTDvM~aGKv~Vv~GYGdVGKgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~~V~tm~ea~~e~difVTtTGc~dii~~ 285 (434)
T KOG1370|consen 206 RATDVMIAGKVAVVCGYGDVGKGCAQALKGFGARVIVTEIDPICALQAAMEGYEVTTLEEAIREVDIFVTTTGCKDIITG 285 (434)
T ss_pred hhhhheecccEEEEeccCccchhHHHHHhhcCcEEEEeccCchHHHHHHhhccEeeeHHHhhhcCCEEEEccCCcchhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCeEEEEecCCCcccchhhhhc--cceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEehhhHh
Q psy15208 882 DHMRDMKDQAIVCNIGHFDNEIEVEKLKK--YKWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFAN 959 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d~eid~~~l~~--~~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~~ 959 (1027)
+||++||++++++|+||||.|||+.+|.. .++..+++++++|.+|+|+.|.|||+||||||+|++|||++||+.||++
T Consensus 286 ~H~~~mk~d~IvCN~Ghfd~EiDv~~L~~~~~~~~~vk~QvD~~~~~~gr~iIlLAeGRLvNL~CatghpSFvmS~sftn 365 (434)
T KOG1370|consen 286 EHFDQMKNDAIVCNIGHFDTEIDVKWLNTPALTWENVKPQVDRYILPNGKHIILLAEGRLVNLGCATGHPSFVMSNSFTN 365 (434)
T ss_pred HHHHhCcCCcEEeccccccceeehhhccCCcceeeecccccceeeccCCcEEEEEecCceeecccccCCCceEEecchHH
Confidence 99999999999999999999999999984 4888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcC-CCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCCCCCCCC
Q psy15208 960 QTLAQIELFNNT-SNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027 (1027)
Q Consensus 960 q~la~~~l~~~~-~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~~~~~~~ 1027 (1027)
|+||+++||+++ ++|+.|||.||+.+||+||++||.+||++|++||++|++||+.+..||||||||||
T Consensus 366 QvlAqIeLwt~p~~kY~~~V~~LPKklDE~VA~lHL~kl~~kLTkLt~~Qa~YlG~~~~gPfKpdhYRY 434 (434)
T KOG1370|consen 366 QVLAQIELWTAPEGKYKVGVYVLPKKLDEYVASLHLGKLGAKLTKLTDKQAKYLGLSKDGPFKPDHYRY 434 (434)
T ss_pred HHHHHHHHhcCCCCccccceEecchhhHHHHHHhhhhhhchhhhhhhHHHHHhcCCCcCCCCCCCCCCC
Confidence 999999999998 79999999999999999999999999999999999999999999999999999999
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-129 Score=1112.15 Aligned_cols=462 Identities=59% Similarity=0.936 Sum_probs=445.7
Q ss_pred CCceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCCC
Q psy15208 563 ADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYST 642 (1027)
Q Consensus 563 ~~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~st 642 (1027)
-+|+||||+||++|+++|+||++|||+|+++|++|+++|||+|+||++|||||+|||+|++||+++||||+|||||||||
T Consensus 4 ~~~~v~d~~la~~G~~~i~wa~~~mp~l~~~~~~~~~~~pl~G~~i~~~lHl~~kTa~L~~tL~~~GA~v~~~~~Np~sT 83 (477)
T PLN02494 4 REYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFST 83 (477)
T ss_pred cceeecchhhhHHHHHHHHHHHHhCHHHHHHHHHhhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEcCCCccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhccccccc---cccCCCCC-
Q psy15208 643 QDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENN---ISILSNPC- 718 (1027)
Q Consensus 643 qd~~aaal~~~g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~---~~~~~~~~- 718 (1027)
||||||||++.||+||||||||.||||||++++|+|.++ .+|+|||||||||+.++|.+.++|.. ++.++.|.
T Consensus 84 qd~vaaal~~~gi~vfa~~g~~~~ey~~~~~~~l~~~~~---~~p~~i~DDG~dl~~~~h~~~~~e~~~~~~~~~~~~~~ 160 (477)
T PLN02494 84 QDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPG---GGPDLIVDDGGDATLLIHEGVKAEEEFEKDGTLPDPTS 160 (477)
T ss_pred hHHHHHHHHhCCceEEEecCCCHHHHHHHHHHHHcCCCC---CCCCEEEeCCchHHHHHHhchhhhhcccccccCCCCCC
Confidence 999999999999999999999999999999999999876 58999999999999999988777774 35555554
Q ss_pred --ChhHHHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhH
Q psy15208 719 --SEEEVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESL 796 (1027)
Q Consensus 719 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~ 796 (1027)
+.|+||||++|+++++++|.+||+++++++|++||||||++||++|+++|.|+||||+||||.+|++|||+||||||+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~EeTttGv~Rl~~m~~~g~L~~Pvi~vnds~~K~~fDn~yGtgqS~ 240 (477)
T PLN02494 161 TDNAEFKIVLTIIKDGLKVDPKKYHKMKERLVGVSEETTTGVKRLYQMQKNGTLLFPAINVNDSVTKSKFDNLYGCRHSL 240 (477)
T ss_pred cccHHHHHHHHHHHHHHhhCcchhhHHHHhhcCCcccccHHHHHHHHHHHCCCCCCCEEEEcChhhhhhhhccccccccH
Confidence 559999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCc
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~ 876 (1027)
|++++|.|+..+.||+|+|+|||+||+++|++++++||+|+|+|++|.++.+|.++|+.+.++++++..+|+||++||++
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv~leEal~~ADVVI~tTGt~ 320 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVLTLEDVVSEADIFVTTTGNK 320 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeeccHHHHHhhCCEEEECCCCc
Confidence 99999999999999999999999999999999999999999999999998899999999889999999999999999999
Q ss_pred ccCcHHHHhcCCCCeEEEEecCCCcccchhhhhc---cceeccccceeeeecCC-CcEEEEecCCccccccCCCCCCcce
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKK---YKWENIKPQVDHIIFPD-GKKIILLAEGRLVNLGCGTGHPSYV 952 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~---~~~~~~~~~v~~y~~~d-g~~i~LLa~GrlvNl~~~~G~P~~v 952 (1027)
++++.++|+.||+||+|+|+|+++.|||.+.|.. .++.+++++++.|.++| |++|+||++||+|||+|++|||++|
T Consensus 321 ~vI~~e~L~~MK~GAiLiNvGr~~~eID~~aL~~~~~l~~~~i~~~vd~y~~~d~g~~i~ll~eGrlvNl~~~~GhP~ev 400 (477)
T PLN02494 321 DIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGSGIIVLAEGRLMNLGCATGHPSFV 400 (477)
T ss_pred cchHHHHHhcCCCCCEEEEcCCCCCccCHHHHhhccccceeccCCCceEEEcCCCCCEEEEEeCCccccccCCCCCCcce
Confidence 9999999999999999999999999999999985 46778899999999999 9999999999999999999999999
Q ss_pred EehhhHhHHHHHHHHhhc--CCCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCCCCCCCC
Q psy15208 953 MSSSFANQTLAQIELFNN--TSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027 (1027)
Q Consensus 953 md~sf~~q~la~~~l~~~--~~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~~~~~~~ 1027 (1027)
||+||++|+||++||+++ .++|+++||.||+++|++||++||++||++||+||+||++||++..+|||||+||||
T Consensus 401 md~sFa~Q~la~~~l~~~~~~~~~~~~v~~lP~~~D~~vA~~~L~~~g~~~~~lt~~Q~~yl~~~~~gp~k~~~y~y 477 (477)
T PLN02494 401 MSCSFTNQVIAQLELWNEKKSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYINVPVEGPYKPAHYRY 477 (477)
T ss_pred eeHHHHHHHHHHHHHHhcccccccCCCcEECCHHHHHHHHHHHHHHcCCccccCCHHHHHhcCCCcCCCCCccccCC
Confidence 999999999999999988 688999999999999999999999999999999999999999999999999999999
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-126 Score=1091.95 Aligned_cols=462 Identities=64% Similarity=1.029 Sum_probs=446.4
Q ss_pred CCceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCCC
Q psy15208 563 ADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYST 642 (1027)
Q Consensus 563 ~~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~st 642 (1027)
.+|+||||+||++|+++|+||++|||+||++|++|+++|||+|+||++|+|||+|||+|++||+++||||+|||||||||
T Consensus 3 ~~~~v~d~~la~~G~~~i~wa~~~mP~L~~~~~~~~~~~pl~G~ri~~~lh~~~~Ta~l~~tL~~~GA~v~~~~~n~~st 82 (476)
T PTZ00075 3 TDYKVKDISLAEFGRKEIELAENEMPGLMALREEYGPSKPLKGARITGCLHMTVQTAVLIETLKALGAEVRWCSCNIFST 82 (476)
T ss_pred cceeeccchhhhHhHHHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEEcchHHHHHHHHHHHHcCCEEEEEcCCCCcc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCC-CcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhcccccccc---ccCCCCC
Q psy15208 643 QDHAAAAIASKG-IPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNI---SILSNPC 718 (1027)
Q Consensus 643 qd~~aaal~~~g-~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~---~~~~~~~ 718 (1027)
||||||||++.| |+||||||||+||||||++++|+|+++ .+|+||+||||||+.++|+|.++|... ++++.+.
T Consensus 83 qD~~aaal~~~g~i~vfa~~g~t~eey~~~~~~~l~~~~~---~~p~~i~DdG~dl~~~~~~g~~~e~~~~~~~~~~~~~ 159 (476)
T PTZ00075 83 QDHAAAAIAKAGSVPVFAWKGETLEEYWWCTEQALKWPNG---DGPNLIVDDGGDATLLVHEGVKAEKLYEEKGILPDPL 159 (476)
T ss_pred ccHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHhccCC---CCCCEEEECCcHHHHHHHhhhHhhhccccccccCCCc
Confidence 999999999999 999999999999999999999999876 589999999999999999999999875 4555443
Q ss_pred ---ChhHHHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhh
Q psy15208 719 ---SEEEVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRES 795 (1027)
Q Consensus 719 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s 795 (1027)
++|++|||++|++.++++|++||+++++++|++|||||||+||++|+++|.|.|||+||||+.+|+.|||.||+++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~EeTttGv~rl~~m~~~g~L~iPV~nv~d~~tk~~aD~~~G~~~s 239 (476)
T PTZ00075 160 DPSNEDEKCLLTVLKKLLTKNPDKWTNLVKKIVGVSEETTTGVHRLYKMLKKGELLFPAINVNDSVTKSKFDNIYGCRHS 239 (476)
T ss_pred ccccHHHHHHHHHHhhhhhcCchhhhhhhhccEeeeecchHHHHHHHHHHHCCCCCceEEEeCCcchHHHHHHHHHHHHH
Confidence 66999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCC
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~ 875 (1027)
++++++|.++..+.||+|+|+|||+||+++|++|+++||+|+++|++|.++.+|.++|+++.+++++++.+|+||+|||+
T Consensus 240 ~~d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~~leell~~ADIVI~atGt 319 (476)
T PTZ00075 240 LIDGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTLEDVVETADIFVTATGN 319 (476)
T ss_pred HHHHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceeccHHHHHhcCCEEEECCCc
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCCcccchhhhhc---cceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcce
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKK---YKWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYV 952 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~---~~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~v 952 (1027)
+++|+.++|+.||+|++|+|+|+++.|++++.|.. ....++.+.+..|++|||++|+||++||+|||+|++|||++|
T Consensus 320 ~~iI~~e~~~~MKpGAiLINvGr~d~Ei~i~aL~~~~~vdv~evep~v~~~~~~~g~~i~llaeGrlvNl~~~~GhP~~v 399 (476)
T PTZ00075 320 KDIITLEHMRRMKNNAIVGNIGHFDNEIQVAELEAYPGIEIVEIKPQVDRYTFPDGKGIILLAEGRLVNLGCATGHPSFV 399 (476)
T ss_pred ccccCHHHHhccCCCcEEEEcCCCchHHhHHHHHhcCCceeecccCCCCeEEeCCCCEEEEEeCCCccccCCCCCCCeeE
Confidence 99999999999999999999999999999888775 457889999999999999999999999999999999999999
Q ss_pred EehhhHhHHHHHHHHhhcCC--CCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCCCCCCCC
Q psy15208 953 MSSSFANQTLAQIELFNNTS--NYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027 (1027)
Q Consensus 953 md~sf~~q~la~~~l~~~~~--~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~~~~~~~ 1027 (1027)
||+||++|+||++||+++++ +|+++||.||+++|++||++||++||++||+||+||++||+...+||||||||||
T Consensus 400 Md~sfa~Q~la~~~l~~~~~~~~~~~~v~~lp~~~d~~vA~~~L~~~g~~~~~lt~~q~~yl~~~~~gp~k~~~y~y 476 (476)
T PTZ00075 400 MSNSFTNQVLAQIELWENRDTGKYPNGVYKLPKELDEKVARLHLKKLGAKLTKLTDKQAEYIGVPVDGPYKSDHYRY 476 (476)
T ss_pred eeHHHHHHHHHHHHHHhccCccccCCceEECCHHHHHHHHHHHHHHcCCccccCCHHHHHhcCCCCCCCCCccccCC
Confidence 99999999999999999987 8999999999999999999999999999999999999999999999999999999
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-112 Score=978.42 Aligned_cols=418 Identities=67% Similarity=1.024 Sum_probs=409.0
Q ss_pred cCCceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCC
Q psy15208 562 SADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYS 641 (1027)
Q Consensus 562 ~~~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~s 641 (1027)
..+|+||||+||++|+++|+||++|||+|+++|++|+++|||+|+||++|+|||+|||+|++||+++||||+||+|||||
T Consensus 5 ~~~~~~~d~~l~~~g~~~i~w~~~~mp~l~~~~~~~~~~~pl~G~~i~~~~Hl~~~Ta~l~~~L~~~GA~v~~~~~np~S 84 (425)
T PRK05476 5 GTDYKVADISLADWGRKEIEWAETEMPGLMAIREEFAAEKPLKGARIAGCLHMTIQTAVLIETLKALGAEVRWASCNPFS 84 (425)
T ss_pred CCceeecchhhhhhhhHHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEEeccccHHHHHHHHHHcCCEEEEEeCCCcc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhCCCcEEEeeCCCHHHHHHHHHHHh-cCCCCCCCcCcceeecccchhhHHhhhccccccccccCCCCCCh
Q psy15208 642 TQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIF-DWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSE 720 (1027)
Q Consensus 642 tqd~~aaal~~~g~~v~a~~~~~~~ey~~~~~~~l-~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~~~~~~~~~~ 720 (1027)
|||||||||++.||+||||+|+|.||||||++++| + ++|++||||||||+.++|
T Consensus 85 tqd~vaaaL~~~gi~v~a~~~~~~~ey~~~~~~~l~~-------~~p~iiiDdGgdl~~~~~------------------ 139 (425)
T PRK05476 85 TQDDVAAALAAAGIPVFAWKGETLEEYWECIERALDG-------HGPNMILDDGGDLTLLVH------------------ 139 (425)
T ss_pred cCHHHHHHHHHCCceEEecCCCCHHHHHHHHHHHhcC-------CCCCEEEecccHHHHHHH------------------
Confidence 99999999999999999999999999999999999 6 589999999999999999
Q ss_pred hHHHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHH
Q psy15208 721 EEVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGI 800 (1027)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i 800 (1027)
++||+++++++|++||||||++||++|+++|.|+|||||||||.+|++|||+|||++|+|+++
T Consensus 140 -----------------~~~~~~~~~i~G~~EeTttGv~rl~~~~~~~~l~~Pv~~vn~s~~K~~~dn~~gt~~s~~~ai 202 (425)
T PRK05476 140 -----------------TERPELLANIKGVTEETTTGVHRLYAMAKDGALKFPAINVNDSVTKSKFDNRYGTGESLLDGI 202 (425)
T ss_pred -----------------HHhhHhHhccEeeeecchHHHHHHHHHHHcCCCCCCEEecCCcccCccccccHHHHhhhHHHH
Confidence 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCc
Q psy15208 801 KRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 801 ~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~ 880 (1027)
++.+++.++|++|+|+|||+||+++|++|+++|++|+|+|++|.++.+|.++|+++.++++++..+|+||++||++++++
T Consensus 203 ~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~~l~eal~~aDVVI~aTG~~~vI~ 282 (425)
T PRK05476 203 KRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTMEEAAELGDIFVTATGNKDVIT 282 (425)
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEecCHHHHHhCCCEEEECCCCHHHHH
Confidence 99999889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhhcc--ceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEehhhH
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLKKY--KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFA 958 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~~~--~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~ 958 (1027)
.++|+.||+|++++|+||++.|+|++.|... +.+++++++.+|++|||+.++||++||+|||+|++|||.+|||+||+
T Consensus 283 ~~~~~~mK~GailiNvG~~d~Eid~~~L~~~~~~~~~v~~~v~~y~~~~g~~i~lLa~GrlvNl~~~~ghp~~vmd~sfa 362 (425)
T PRK05476 283 AEHMEAMKDGAILANIGHFDNEIDVAALEELAVKWREIKPQVDEYTLPDGKRIILLAEGRLVNLGAATGHPSEVMDMSFA 362 (425)
T ss_pred HHHHhcCCCCCEEEEcCCCCCccChHHHhhcCcceeecCCCceEEEeCCCCEEEEEeCCcccccCCCCCCcceeeCHHHH
Confidence 9999999999999999999999999999865 78899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCC
Q psy15208 959 NQTLAQIELFNNTSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYK 1021 (1027)
Q Consensus 959 ~q~la~~~l~~~~~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~ 1021 (1027)
+|+||+.+|+++++++++|||.||+++|++||++||++||++||+||+||++||++|..||||
T Consensus 363 ~q~l~~~~l~~~~~~~~~~v~~lp~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~~~~~g~~~ 425 (425)
T PRK05476 363 NQALAQIELFTNRGKLEPGVYVLPKELDEEVARLKLKALGVKLDELTEEQAEYIGVWVEGPFK 425 (425)
T ss_pred HHHHHHHHHHhccCcCCCCeEECCHHHHHHHHHHHHHHcCCccccCCHHHHHHcCCCcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999998
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-111 Score=960.34 Aligned_cols=404 Identities=55% Similarity=0.829 Sum_probs=394.9
Q ss_pred hhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCCCHHHHHHHHHhC
Q psy15208 574 QWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYSTQDHAAAAIASK 653 (1027)
Q Consensus 574 ~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~stqd~~aaal~~~ 653 (1027)
++|+++|+||++|||+|+++|++|+++|||+|+||++|+|||+|||+|++||+++||||+||+||||||||||||||++.
T Consensus 1 ~~g~~~i~w~~~~mp~l~~~~~~~~~~~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~ 80 (406)
T TIGR00936 1 AEGRKKIEWAEREMPVLMRIRERFSEEKPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKA 80 (406)
T ss_pred CccHHHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhccccccccccCCCCCChhHHHHHHHHHhHh
Q psy15208 654 GIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKL 733 (1027)
Q Consensus 654 g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (1027)
||+||||+|+|+||||||++++|+ ++|++||||||||+.++|
T Consensus 81 gi~v~a~~~~~~~ey~~~~~~~l~-------~~p~~iiDdGgdl~~~~~------------------------------- 122 (406)
T TIGR00936 81 GIPVFAWRGETNEEYYWAIEQVLD-------HEPNIIIDDGADLIFLLH------------------------------- 122 (406)
T ss_pred CceEEEecCCCHHHHHHHHHHHhc-------CCCCEEEecccHHHHHHH-------------------------------
Confidence 999999999999999999999998 489999999999999999
Q ss_pred hhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHHhhhcCccccCCEE
Q psy15208 734 KIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKIA 813 (1027)
Q Consensus 734 ~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r~t~~~l~Gk~V 813 (1027)
++||++.++++|++||||||++||++|+++|.|+||||+||||.+|++|||+|||++|+|++++|.+++.++|++|
T Consensus 123 ----~~~~~~~~~~~G~~EeTttGv~rl~~~~~~~~L~~Pvi~vnds~~K~~fDn~yg~g~s~~~~i~r~t~~~l~Gk~V 198 (406)
T TIGR00936 123 ----TERPELLEKIIGGSEETTTGVIRLRAMEAEGVLKFPAINVNDAYTKSLFDNRYGTGQSTIDGILRATNLLIAGKTV 198 (406)
T ss_pred ----HhhhhhhhccEEEeecchHHHHHHHHHHHcCCCCCcEEEecchhhchhhhcccccchhHHHHHHHhcCCCCCcCEE
Confidence 7899999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred EEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHHHHhcCCCCeEE
Q psy15208 814 VIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIV 893 (1027)
Q Consensus 814 vViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~gail 893 (1027)
+|+|||+||+++|++++++|++|+|+|+||.++.+|.++|+.+.++++++..+|+||++||++++++.++|+.||+|+++
T Consensus 199 vViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~~leeal~~aDVVItaTG~~~vI~~~~~~~mK~Gail 278 (406)
T TIGR00936 199 VVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKIGDIFITATGNKDVIRGEHFENMKDGAIV 278 (406)
T ss_pred EEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeCCHHHHHhcCCEEEECCCCHHHHHHHHHhcCCCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCcccchhhhhcc--ceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEehhhHhHHHHHHHHhhcC
Q psy15208 894 CNIGHFDNEIEVEKLKKY--KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNT 971 (1027)
Q Consensus 894 vNvG~~d~eid~~~l~~~--~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~~q~la~~~l~~~~ 971 (1027)
+|+|+++.|||.+.|... +..++++++++|.+|||+.|+||++||+|||+|++|||.+|||+||++|+||+.||++++
T Consensus 279 iN~G~~~~eId~~aL~~~~~~~~~~~~~v~~~~~~~g~~i~ll~~GrlvNl~~~~ghp~~vmd~sfa~q~la~~~l~~~~ 358 (406)
T TIGR00936 279 ANIGHFDVEIDVKALEELAVEKRNVRPQVDEYILKDGRRIYLLAEGRLVNLAAAEGHPSEVMDMSFANQALAAEYLWKNH 358 (406)
T ss_pred EEECCCCceeCHHHHHHHHhhccccccceEEEEeCCCCEEEEEeCCceecccCCCCCcceeeCHHHHHHHHHHHHHHhcc
Confidence 999999999999999754 677899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCC
Q psy15208 972 SNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGP 1019 (1027)
Q Consensus 972 ~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~ 1019 (1027)
+++++|||.||+++|++||++||++||++||+||+||++||++|+.||
T Consensus 359 ~~~~~~v~~lp~~~d~~va~~~l~~~g~~~~~lt~~q~~y~~~~~~g~ 406 (406)
T TIGR00936 359 DKLEPGVYRLPKELDEMVARLKLEAMGIEIDELTEEQKEYLGSWEEGT 406 (406)
T ss_pred cccCCCeEECCHHHHHHHHHHHHHHcCceeccCCHHHHHHhcCCcCCC
Confidence 999999999999999999999999999999999999999999999997
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-106 Score=923.20 Aligned_cols=411 Identities=69% Similarity=1.062 Sum_probs=396.7
Q ss_pred CCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCCCHHHHHHH
Q psy15208 570 INLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYSTQDHAAAA 649 (1027)
Q Consensus 570 ~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~stqd~~aaa 649 (1027)
+|||++|+++|+||++|||+|+++|++|+++|||+|+||++|+|||+|||+|++||+++||||+||+|||||||||||||
T Consensus 1 ~~l~~~g~~~i~w~~~~mp~l~~~~~~~~~~~p~~g~~i~~~~hl~~~ta~l~~~L~~~GA~v~~~~~np~stqd~vaa~ 80 (413)
T cd00401 1 ISLAAFGRKEIEIAENEMPGLMAIREEYGASKPLKGARIAGCLHMTVQTAVLIETLVALGAEVRWSSCNIFSTQDHAAAA 80 (413)
T ss_pred CCchhhhhHHHHHHHHHCHHHHHHHHHhhccCCCCCCEEEEEEcchHHHHHHHHHHHHcCCEEEEEcCCCccchHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhccccccccccCCCCCChhHHHHHHHH
Q psy15208 650 IASKGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSI 729 (1027)
Q Consensus 650 l~~~g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1027)
|++.||+||||||+|.||||||++++|+|+++ +|++|+||||||+.++|
T Consensus 81 l~~~gi~v~a~~~~~~~~y~~~~~~~l~~~~~----~p~~i~DdGg~~~~~~~--------------------------- 129 (413)
T cd00401 81 IAAAGIPVFAWKGETLEEYWWCIEQALKFPDG----EPNMILDDGGDLTLLIH--------------------------- 129 (413)
T ss_pred HHhcCceEEEEcCCCHHHHHHHHHHHHhccCC----CCcEEEecchHHHHHHH---------------------------
Confidence 99999999999999999999999999999664 79999999999999999
Q ss_pred HhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHHhhhcCcccc
Q psy15208 730 KNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIA 809 (1027)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r~t~~~l~ 809 (1027)
.++|++.++++|++||||||++||++|+++|.|+||||+||||.+|++|||+|||+||+|++++|.++..+.
T Consensus 130 --------~~~~~~~~~~~G~~EeTttGv~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~g~s~~~~i~r~t~~~l~ 201 (413)
T cd00401 130 --------KKHPELLPGIRGISEETTTGVHRLYKMEKEGKLKFPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIA 201 (413)
T ss_pred --------hhhhhhhhccEEEeecchHHHHHHHHHHHCCCCCCCEEEecchhhcccccccchhchhhHHHHHHhcCCCCC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHHHHhcCCC
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKD 889 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~ 889 (1027)
|++|+|+|||+||+++|+.++++||+|+|+|++|.|+.+|.++|++++++++++..+|+||+|||++++++.++++.||+
T Consensus 202 GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v~~aDVVI~atG~~~~i~~~~l~~mk~ 281 (413)
T cd00401 202 GKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAVKEGDIFVTTTGNKDIITGEHFEQMKD 281 (413)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHHcCCCEEEECCCCHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999989999999
Q ss_pred CeEEEEecCCCcccchhhhhcc--ceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEehhhHhHHHHHHHH
Q psy15208 890 QAIVCNIGHFDNEIEVEKLKKY--KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIEL 967 (1027)
Q Consensus 890 gailvNvG~~d~eid~~~l~~~--~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~~q~la~~~l 967 (1027)
|++++|+|+++.+||.+.+... +....+.++..|.++||+.|+||++|++|||+++.|||++|||++|++|++++.++
T Consensus 282 GgilvnvG~~~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l 361 (413)
T cd00401 282 GAIVCNIGHFDVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIEL 361 (413)
T ss_pred CcEEEEeCCCCCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHH
Confidence 9999999999999999988754 45556677777888989999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCC
Q psy15208 968 FNNTSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGP 1019 (1027)
Q Consensus 968 ~~~~~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~ 1019 (1027)
+.+++++.++|+.+|+++|++||++||++||++||+||+||++||++|+.||
T Consensus 362 ~~~~~~~~~kV~~~p~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~~~~~g~ 413 (413)
T cd00401 362 WTNRDKYEVGVYFLPKKLDEEVARLHLGKLGVKLTKLTDKQAEYLGVPVEGP 413 (413)
T ss_pred HhcCCcCCCcEEECCHHHHHHHHHHHHHhcCceeccCCHHHHHHhcCCcCCC
Confidence 9998889999999999999999999999999999999999999999999997
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-94 Score=766.69 Aligned_cols=265 Identities=55% Similarity=0.855 Sum_probs=230.5
Q ss_pred CceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCCCH
Q psy15208 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYSTQ 643 (1027)
Q Consensus 564 ~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~stq 643 (1027)
+|+||||+||++|+++|+||++|||+||++|++|+++|||+|+||++|||||+|||+|++||+++||||+||||||||||
T Consensus 2 ~y~VkDi~LA~~G~~~i~wa~~~MPvL~~lr~~~~~~kPl~G~rIa~cLHle~kTA~L~~tL~a~GAeV~~~~sNplSTQ 81 (268)
T PF05221_consen 2 DYKVKDISLAESGRKKIEWAERHMPVLMALRERFEAEKPLKGARIAGCLHLEAKTAVLAETLKALGAEVRWTGSNPLSTQ 81 (268)
T ss_dssp EEBES-GGGHHHHHHHHHHHHHT-HHHHHHHHHHTTT-TTTTEEEEEES--SHHHHHHHHHHHHTTEEEEEEESSTTT--
T ss_pred CCcccCccHhHHHHHHHHHHHhhCHHHHHHHHHhhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCeEEEecCCCcccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhccccccccccCCCCCChhHH
Q psy15208 644 DHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEV 723 (1027)
Q Consensus 644 d~~aaal~~~g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~~~~~~~~~~~~~ 723 (1027)
|||||||++.||+||||||+|.||||||++++|+|.++ .+|++||||||||+.++|
T Consensus 82 DdvaAAL~~~Gi~V~A~~get~eey~~~i~~~L~~~~~---~~P~~iiDDG~Dl~~~lh--------------------- 137 (268)
T PF05221_consen 82 DDVAAALAEEGIPVFAWKGETDEEYWWCIEKALSWEDD---HGPNLIIDDGGDLVNLLH--------------------- 137 (268)
T ss_dssp HHHHHHHHHTTEEEEE-TT--HHHHHHHHHHCHSESTT---CE-SEEEESSSHHHHHHH---------------------
T ss_pred hHHHHHhccCCceEEEeCCCCHHHHHHHHHHHhcCCCC---CCcceeecchHHHHHHHH---------------------
Confidence 99999999999999999999999999999999999876 689999999999999999
Q ss_pred HHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHHhhh
Q psy15208 724 CLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRA 803 (1027)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r~ 803 (1027)
++||+++++++|+||||||||+||++|+++|.|+||||+||||.+|++||
T Consensus 138 --------------~~~~~l~~~i~G~sEETTTGv~rL~am~~~g~L~~PviavNDa~tK~~FD---------------- 187 (268)
T PF05221_consen 138 --------------TKRPELLSGIIGGSEETTTGVHRLRAMEKEGKLKFPVIAVNDAVTKHLFD---------------- 187 (268)
T ss_dssp --------------HHHHHHHHT-SEEEE-SHHHHHHHHHHHHTT---SEEEESTTSHHHHTTH----------------
T ss_pred --------------HHHHhhhhheEEecccccccchhhhhhhhhcccCCCeeEecchhhHhhcC----------------
Confidence 78999999999999999999999999999999999999999999999998
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHHH
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDH 883 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~ 883 (1027)
T Consensus 188 -------------------------------------------------------------------------------- 187 (268)
T PF05221_consen 188 -------------------------------------------------------------------------------- 187 (268)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcCCCCeEEEEecCCCcccchhhhhccceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEehhhHhHHHH
Q psy15208 884 MRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLA 963 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d~eid~~~l~~~~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~~q~la 963 (1027)
||+||||+||++|+||
T Consensus 188 ----------------------------------------------------------------HP~eVMd~SFa~QaLa 203 (268)
T PF05221_consen 188 ----------------------------------------------------------------HPSEVMDMSFANQALA 203 (268)
T ss_dssp ----------------------------------------------------------------S-HHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------CchhhhhhHhHHHHHH
Confidence 9999999999999999
Q ss_pred HHHHhhcC--CCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCCCCCCC
Q psy15208 964 QIELFNNT--SNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYR 1026 (1027)
Q Consensus 964 ~~~l~~~~--~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~~~~~~ 1026 (1027)
++||++++ ++|++|||.||+++|++||++||++||++||+||++|++||++|++|||||||||
T Consensus 204 ~~~L~~~~~~~~~~~~V~~lP~~lDe~VA~~kL~~lGi~id~Lt~eQ~~YL~~~~~GP~k~~~yr 268 (268)
T PF05221_consen 204 QIYLWKNPNSGKLEPGVYPLPKELDEEVARLKLKSLGIKIDKLTEEQAEYLGSWQEGPFKPDHYR 268 (268)
T ss_dssp HHHHHHTGTTGGSTSSEEE--HHHHHHHHHHHHGGGT-------HHHHHHHTS-TTS-SS-TT--
T ss_pred HHHHHhCcCccccCCCEEECCccchHHHHHHHHHHcCCccccCCHHHHHHcCCCCCCCCCccccC
Confidence 99999887 8999999999999999999999999999999999999999999999999999998
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D .... |
| >PF02773 S-AdoMet_synt_C: S-adenosylmethionine synthetase, C-terminal domain; InterPro: IPR022630 The three domains of S-adenosylmethionine synthetase have the same alpha+beta fold | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-77 Score=570.03 Aligned_cols=138 Identities=72% Similarity=1.242 Sum_probs=122.0
Q ss_pred ecCCCCccccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEE
Q psy15208 413 IGGPKGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIM 492 (1027)
Q Consensus 413 ~ggp~~d~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~ 492 (1027)
||||.|||||||||||||||||+++|||||||||||||||||||||||||||||||||||+|||||||||||+++|+||+
T Consensus 1 iGGp~~D~GlTGRKiivDtYGg~~~hGGGafSGKD~tKvDRsaaY~aR~iAKniVaagla~~c~vqlsYaIGv~~P~si~ 80 (138)
T PF02773_consen 1 IGGPQGDTGLTGRKIIVDTYGGWARHGGGAFSGKDPTKVDRSAAYMARYIAKNIVAAGLAKRCEVQLSYAIGVAEPVSIY 80 (138)
T ss_dssp S-TTTTSEEETTSSTTTTTTTTSSB-BS---TTB-TTSHHHHHHHHHHHHHHHHHHTTSBSEEEEEEEE-TT-SS-SEEE
T ss_pred CCCCccccccccceEEEecccCceecCCccccCCChhhhhccHHHHHHHHHHHHHHccchHHHHhhceeeeccccCcccE
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCccc
Q psy15208 493 VTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWEL 552 (1027)
Q Consensus 493 v~~~~t~~~~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~ 552 (1027)
||||||+++++++|.++|+++|||||++||++|+|++|||++||+||||||++ |||||
T Consensus 81 v~tfgT~~~~d~~i~~~I~~~Fdl~P~~II~~L~L~~PiY~~TA~yGHFGr~~--~~WE~ 138 (138)
T PF02773_consen 81 VDTFGTGKISDEEILEIIKENFDLRPAGIIKELDLRRPIYRKTAAYGHFGRED--FPWEK 138 (138)
T ss_dssp EEETT-BSS-HHHHHHHHHHHS--SHHHHHHHCTTTSSTHGGGGSS-SSSSTT--SGGG-
T ss_pred EEeCCCccchHHHHHHHHHHHhCCcHHHHHHHhCcCCchhHhhhCcCCCCCCC--CCCCC
Confidence 99999999999999999999999999999999999999999999999999986 99997
|
This entry represents the C-terminal domain of S=adenosylmethionine synthetase and is found in association with PF00438 from PFAM and PF02772 from PFAM. S-adenosylmethionine synthetase (MAT, 2.5.1.6 from EC) is the enzyme that catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP []. AdoMet is an important methyl donor for transmethylation and is also the propylamino donor in polyamine biosynthesis. In bacteria there is a single isoform of AdoMet synthetase (gene metK), there are two in budding yeast (genes SAM1 and SAM2) and in mammals while in plants there is generally a multigene family. The sequence of AdoMet synthetase is highly conserved throughout isozymes and species. The active sites of both the Escherichia coli and rat liver MAT reside between two subunits, with contributions from side chains of residues from both subunits, resulting in a dimer as the minimal catalytic entity. The side chains that contribute to the ligand binding sites are conserved between the two proteins. In the structures of complexes with the E. coli enzyme, the phosphate groups have the same positions in the (PPi plus Pi) complex and the (ADP plus Pi) complex, and are located at the bottom of a deep cavity with the adenosyl group nearer the entrance []; GO: 0004478 methionine adenosyltransferase activity; PDB: 3IML_B 1QM4_B 1O9T_B 1O93_A 1O92_B 1O90_A 1FUG_A 1RG9_D 1XRA_A 1P7L_C .... |
| >PF02772 S-AdoMet_synt_M: S-adenosylmethionine synthetase, central domain; InterPro: IPR022629 The three domains of S-adenosylmethionine synthetase have the same alpha+beta fold | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-50 Score=384.93 Aligned_cols=117 Identities=64% Similarity=1.123 Sum_probs=106.5
Q ss_pred CCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCCCCceeEEEEe-cCCceeEEeEEEEeeccCC
Q psy15208 295 DQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRY-DNGKPVAIDTIVLSTQHDP 373 (1027)
Q Consensus 295 ~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~~~~pd~k~qv~~~y-~~~~~~~~~~~~~s~qh~~ 373 (1027)
++|||||||||||||||||+||||||+|||+|++||+++||+|.+|||||||||||||+| ++++|+||++||||+||++
T Consensus 2 ~~GAGDQGimfGYA~~ET~~~MPl~i~lAh~L~~~l~~~R~~~~~~~l~PD~KsQVtveY~~~~~P~ri~tivvS~QH~~ 81 (120)
T PF02772_consen 2 EIGAGDQGIMFGYACDETPELMPLPIVLAHRLARRLAEVRKNGELPWLRPDGKSQVTVEYDENGKPVRIDTIVVSTQHDE 81 (120)
T ss_dssp CCSBSS-EEEEEEEETTSTTSS-HHHHHHHHHHHHHHHHHHTSSSTTEEEEEEEEEEEEEEETTEEEEEEEEEEEEEE-T
T ss_pred CcCcCcceEEEeeEcCCCCccCChHHHHHHHHHHHHHHHHhcccCcccCCCcceeEEEeeccCCceeeeeEEEEEecCCC
Confidence 689999999999999999999999999999999999999999999999999999999999 6899999999999999999
Q ss_pred CCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCc
Q psy15208 374 EIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRF 411 (1027)
Q Consensus 374 ~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f 411 (1027)
+++++++|++|+++||+||+|++++ ++|+|+|||||||
T Consensus 82 ~i~~~~ir~~i~e~Vi~~v~~~~~~~~~t~~~INPtGrF 120 (120)
T PF02772_consen 82 DISLEEIREDIKEKVIKPVIPEYLLDEDTKILINPTGRF 120 (120)
T ss_dssp TS-HHHHHHHHHHHTHHHHSHGGG-BTT-EEEESTTS--
T ss_pred CCCHHHHHHHHHHHHHHHhcccccCCCCcEEEECCCCCC
Confidence 9999999999999999999999877 5799999999998
|
This entry represents the central domain and is found in association with PF00438 from PFAM and PF02773 from PFAM. S-adenosylmethionine synthetase (MAT, 2.5.1.6 from EC) is the enzyme that catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP []. AdoMet is an important methyl donor for transmethylation and is also the propylamino donor in polyamine biosynthesis. In bacteria there is a single isoform of AdoMet synthetase (gene metK), there are two in budding yeast (genes SAM1 and SAM2) and in mammals while in plants there is generally a multigene family. The sequence of AdoMet synthetase is highly conserved throughout isozymes and species. The active sites of both the Escherichia coli and rat liver MAT reside between two subunits, with contributions from side chains of residues from both subunits, resulting in a dimer as the minimal catalytic entity. The side chains that contribute to the ligand binding sites are conserved between the two proteins. In the structures of complexes with the E. coli enzyme, the phosphate groups have the same positions in the (PPi plus Pi) complex and the (ADP plus Pi) complex, and are located at the bottom of a deep cavity with the adenosyl group nearer the entrance []; GO: 0004478 methionine adenosyltransferase activity; PDB: 3S82_B 2OBV_A 3RV2_A 1FUG_A 1RG9_D 1XRA_A 1P7L_C 1XRB_A 1MXA_A 1MXB_A .... |
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-40 Score=329.33 Aligned_cols=160 Identities=60% Similarity=0.927 Sum_probs=143.0
Q ss_pred cchhhhhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCC
Q psy15208 788 NLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGD 867 (1027)
Q Consensus 788 n~~g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aD 867 (1027)
|+|||+||++++++|.|+++++||+|+|+|||+||+++|++|+++||+|+|+|+||+++++|.++||++.++++++..+|
T Consensus 1 N~yG~g~S~~d~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~~~ad 80 (162)
T PF00670_consen 1 NRYGTGQSLVDGIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEALRDAD 80 (162)
T ss_dssp HHHHHHHHHHHHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHTTT-S
T ss_pred CccccchhHHHHHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHHhhCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhhcc--ceeccccceeeeecCCCcEEEEecCCccccccCC
Q psy15208 868 IFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKY--KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCG 945 (1027)
Q Consensus 868 vvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~~--~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~ 945 (1027)
+||++||++++++.++|++||+|++|+|+||||.|||++++... +++++++++.+|++|||+.|+||++||+|||+|+
T Consensus 81 i~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~Eid~~~L~~~~~~~~~v~~~v~~y~l~~G~~i~lLa~GrlvNL~~a 160 (162)
T PF00670_consen 81 IFVTATGNKDVITGEHFRQMKDGAILANAGHFDVEIDVDALEANAVEREEVRPQVDRYTLPDGRRIILLAEGRLVNLAAA 160 (162)
T ss_dssp EEEE-SSSSSSB-HHHHHHS-TTEEEEESSSSTTSBTHHHHHTCTSEEEEEETTEEEEEETTSEEEEEEGGGSBHHHHHS
T ss_pred EEEECCCCccccCHHHHHHhcCCeEEeccCcCceeEeeccccccCcEEEEcCCCeeEEEeCCCCEEEEEECCCEEeecCc
Confidence 99999999999999999999999999999999999999999866 8899999999999999999999999999999999
Q ss_pred CC
Q psy15208 946 TG 947 (1027)
Q Consensus 946 ~G 947 (1027)
+|
T Consensus 161 ~g 162 (162)
T PF00670_consen 161 TG 162 (162)
T ss_dssp -S
T ss_pred CC
Confidence 87
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PF00438 S-AdoMet_synt_N: S-adenosylmethionine synthetase, N-terminal domain; InterPro: IPR022628 The three domains of S-adenosylmethionine synthetase have the same alpha+beta fold | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-25 Score=207.32 Aligned_cols=99 Identities=53% Similarity=0.843 Sum_probs=92.3
Q ss_pred ceEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCC
Q psy15208 182 PVVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNID 261 (1027)
Q Consensus 182 ~~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~ 261 (1027)
.++|++|++.+|||||+||+|+++++|++|++||++|+|||+++++++|+|+||+++++++|+++|||+++++|||++++
T Consensus 2 ~~lfTSESV~~GHPDKicDqISDailD~~l~~dp~arVA~E~~~~~~~v~i~GEi~~~~~vd~~~ivR~~i~~IGY~~~~ 81 (100)
T PF00438_consen 2 KYLFTSESVSEGHPDKICDQISDAILDACLKQDPNARVACETLVSTGMVIIAGEITSRAYVDIEKIVREVIKDIGYDDSE 81 (100)
T ss_dssp EEEEEEEEE-TTSHHHHHHHHHHHHHHHHHHH-TT-EEEEEEEEETTEEEEEEEEESSHHHTHHHHHHHHHHHHT-EEGG
T ss_pred ceEEeeccccCCCchhhhceeeeccchHHHhcCCCCeEEEEEEeeccEEEEEEEeccchhhhHHHHHHHHHHHhCCCCcc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceEEEEeeccCCh
Q psy15208 262 YGIDYKSCAVLLIYNKQSL 280 (1027)
Q Consensus 262 ~g~~~~~~~~~~~i~~qs~ 280 (1027)
+|||+++|+|++.|++|||
T Consensus 82 ~gfd~~tc~V~~~i~~QSp 100 (100)
T PF00438_consen 82 YGFDYDTCEVLVAIHEQSP 100 (100)
T ss_dssp GTEETTTSEEEEEEEEE-H
T ss_pred CCCCCCcceEEEeecccCc
Confidence 9999999999999999997
|
This entry represents the N-terminal domain of S-adenosylmethionine synthetase and is found in association with PF02772 from PFAM and PF02773 from PFAM. S-adenosylmethionine synthetase (MAT, 2.5.1.6 from EC) is the enzyme that catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP []. AdoMet is an important methyl donor for transmethylation and is also the propylamino donor in polyamine biosynthesis. In bacteria there is a single isoform of AdoMet synthetase (gene metK), there are two in budding yeast (genes SAM1 and SAM2) and in mammals while in plants there is generally a multigene family. The sequence of AdoMet synthetase is highly conserved throughout isozymes and species. The active sites of both the Escherichia coli and rat liver MAT reside between two subunits, with contributions from side chains of residues from both subunits, resulting in a dimer as the minimal catalytic entity. The side chains that contribute to the ligand binding sites are conserved between the two proteins. In the structures of complexes with the E. coli enzyme, the phosphate groups have the same positions in the (PPi plus Pi) complex and the (ADP plus Pi) complex, and are located at the bottom of a deep cavity with the adenosyl group nearer the entrance []; GO: 0004478 methionine adenosyltransferase activity; PDB: 3RV2_A 3TDE_B 3S82_B 3IML_B 2P02_A 2OBV_A 1QM4_B 1O9T_B 1O93_A 1O92_B .... |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-19 Score=183.88 Aligned_cols=196 Identities=35% Similarity=0.620 Sum_probs=167.6
Q ss_pred eEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC
Q psy15208 5 TKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD 84 (1027)
Q Consensus 5 ~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~ 84 (1027)
..++.|+++.|++.+..-.++. ++.|+.|++|..+.++|+++|+....++..|.++||.++.+|+||.|+|.+.+.
T Consensus 4 ~~~v~i~Gp~G~le~~~~~~~~----~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD 79 (210)
T COG2945 4 MPTVIINGPAGRLEGRYEPAKT----PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFD 79 (210)
T ss_pred CCcEEecCCcccceeccCCCCC----CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCccc
Confidence 3457899999999886654442 578999999999999999999999999999999999999999999999999998
Q ss_pred CccchHHHHHHHHHHHHHhCCCCcE-EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc---CCCCCCCCcEEEEE
Q psy15208 85 SGNGETDDMEILLRYIQKKYPYLPI-ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK---WLIPEVPKNTIIIH 160 (1027)
Q Consensus 85 ~~~~~~~Dv~avl~~L~~~~~~~pv-iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~---~~l~~i~~PvLiIh 160 (1027)
..-++.+|+.++++|++.++|..+. .|.|+|+|+++++.+|.+.|+ ....+...|.... +.+..+++|.++++
T Consensus 80 ~GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e---~~~~is~~p~~~~~dfs~l~P~P~~~lvi~ 156 (210)
T COG2945 80 NGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE---ILVFISILPPINAYDFSFLAPCPSPGLVIQ 156 (210)
T ss_pred CCcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc---ccceeeccCCCCchhhhhccCCCCCceeEe
Confidence 8889999999999999999988775 889999999999999999987 6677777777763 35778899999999
Q ss_pred eCCCCCCChHHHHhhhCCCCCceEe--eccccCCCCccccchhhhhhHH
Q psy15208 161 GELDEIIPLKDVFLWANPLDIPVVV--IPESVSEGHPDKIADQISDAIL 207 (1027)
Q Consensus 161 G~~D~iVP~~~~~~l~~~~~~~~L~--t~Esv~~GHPdkvaDqIsdaIL 207 (1027)
|+.|+++++.....|.+......+. ...|+.+++.+.+.+.+.+.+.
T Consensus 157 g~~Ddvv~l~~~l~~~~~~~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 157 GDADDVVDLVAVLKWQESIKITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred cChhhhhcHHHHHHhhcCCCCceEEecCCCceecccHHHHHHHHHHHhh
Confidence 9999999999999999986655444 4466677777777766666553
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.6e-18 Score=184.93 Aligned_cols=157 Identities=22% Similarity=0.309 Sum_probs=126.4
Q ss_pred cCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---CCcc
Q psy15208 12 GSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---DSGN 87 (1027)
Q Consensus 12 t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---~~~~ 87 (1027)
+++| ++++..|.|.. .++++|+++||++++. ..|..+++.|+++||+|+++|+||||.|.+.. ..+.
T Consensus 7 ~~~g~~l~~~~~~~~~----~~~~~v~llHG~~~~~-----~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~ 77 (276)
T PHA02857 7 NLDNDYIYCKYWKPIT----YPKALVFISHGAGEHS-----GRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFG 77 (276)
T ss_pred cCCCCEEEEEeccCCC----CCCEEEEEeCCCcccc-----chHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHH
Confidence 4567 79999998853 4678889999985432 35888999999999999999999999998643 2334
Q ss_pred chHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc---------------------
Q psy15208 88 GETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK--------------------- 146 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~--------------------- 146 (1027)
..+.|+...++++...++..+++|+||||||.+++.++.++|+ .++++|+++|....
T Consensus 78 ~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~--~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (276)
T PHA02857 78 VYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPN--LFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNK 155 (276)
T ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCcc--ccceEEEeccccccccccHHHHHHHHHHHHhCCCC
Confidence 5677888888877766676789999999999999999999998 78999999874210
Q ss_pred --------C---------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 147 --------W---------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 147 --------~---------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
+ .+..+++|+|++||++|.++|++.+..+.+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~ 235 (276)
T PHA02857 156 IVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHA 235 (276)
T ss_pred ccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHc
Confidence 0 03467899999999999999999998877654
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.9e-18 Score=190.86 Aligned_cols=200 Identities=16% Similarity=0.198 Sum_probs=143.7
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
+.+...+.+.+| +++++.|.|.+. .+++++|||+||++... ...+..++..|+++||+|+++|+||||.|.+.
T Consensus 31 ~~~~~~~~~~dg~~l~~~~~~~~~~--~~~~~~VvllHG~~~~~----~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~ 104 (330)
T PLN02298 31 KGSKSFFTSPRGLSLFTRSWLPSSS--SPPRALIFMVHGYGNDI----SWTFQSTAIFLAQMGFACFALDLEGHGRSEGL 104 (330)
T ss_pred ccccceEEcCCCCEEEEEEEecCCC--CCCceEEEEEcCCCCCc----ceehhHHHHHHHhCCCEEEEecCCCCCCCCCc
Confidence 344556788888 799988887641 24678999999985321 12366788889999999999999999999753
Q ss_pred C---CCccchHHHHHHHHHHHHHh--CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC-------cC---
Q psy15208 83 Y---DSGNGETDDMEILLRYIQKK--YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK-------KW--- 147 (1027)
Q Consensus 83 ~---~~~~~~~~Dv~avl~~L~~~--~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-------~~--- 147 (1027)
. .+.+..++|+.++++++... ++..+++|+||||||.+++.++.++|+ +++++|+++|... .+
T Consensus 105 ~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~ 182 (330)
T PLN02298 105 RAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPE--GFDGAVLVAPMCKISDKIRPPWPIP 182 (330)
T ss_pred cccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcc--cceeEEEecccccCCcccCCchHHH
Confidence 2 24556789999999999764 344579999999999999999999998 7999999987421 00
Q ss_pred ---------------------------------------------------------------CCCCCCCcEEEEEeCCC
Q psy15208 148 ---------------------------------------------------------------LIPEVPKNTIIIHGELD 164 (1027)
Q Consensus 148 ---------------------------------------------------------------~l~~i~~PvLiIhG~~D 164 (1027)
.+..+.+|+|++||++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D 262 (330)
T PLN02298 183 QILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSAD 262 (330)
T ss_pred HHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCC
Confidence 01246799999999999
Q ss_pred CCCChHHHHhhhCCCC---CceEeecc--cc-CCCCccccchhhhhhHHHHHH
Q psy15208 165 EIIPLKDVFLWANPLD---IPVVVIPE--SV-SEGHPDKIADQISDAILDEIF 211 (1027)
Q Consensus 165 ~iVP~~~~~~l~~~~~---~~~L~t~E--sv-~~GHPdkvaDqIsdaILD~~L 211 (1027)
.++|++.+..+++.+. ......++ |. ...+|+...+.+.+.+.+.+.
T Consensus 263 ~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~ 315 (330)
T PLN02298 263 VVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLN 315 (330)
T ss_pred CCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHH
Confidence 9999999988766542 22333332 11 123455545555555555433
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-17 Score=189.38 Aligned_cols=191 Identities=23% Similarity=0.266 Sum_probs=138.5
Q ss_pred EEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---C
Q psy15208 9 NINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---D 84 (1027)
Q Consensus 9 ~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---~ 84 (1027)
.+.+++| ++++..|.|.+ ..++++|||+||++.+ .. .+|..+++.|+++||+|+++|+||||.|++.. .
T Consensus 65 ~~~~~~g~~l~~~~~~p~~---~~~~~~iv~lHG~~~~---~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~ 137 (349)
T PLN02385 65 YEVNSRGVEIFSKSWLPEN---SRPKAAVCFCHGYGDT---CT-FFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIP 137 (349)
T ss_pred eEEcCCCCEEEEEEEecCC---CCCCeEEEEECCCCCc---cc-hHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcC
Confidence 3445666 89999999865 2467899999998532 21 24678899999899999999999999998632 3
Q ss_pred CccchHHHHHHHHHHHHHh--CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC-----------------
Q psy15208 85 SGNGETDDMEILLRYIQKK--YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK----------------- 145 (1027)
Q Consensus 85 ~~~~~~~Dv~avl~~L~~~--~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~----------------- 145 (1027)
++..+++|+.++++.+... ++..+++|+||||||.+++.++.++|+ +++++|+++|...
T Consensus 138 ~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~--~v~glVLi~p~~~~~~~~~~~~~~~~~~~~ 215 (349)
T PLN02385 138 SFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPN--AWDGAILVAPMCKIADDVVPPPLVLQILIL 215 (349)
T ss_pred CHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcc--hhhheeEecccccccccccCchHHHHHHHH
Confidence 5566788888888887653 344579999999999999999999998 7999999986310
Q ss_pred --------------c-----C-------------------------------------CCCCCCCcEEEEEeCCCCCCCh
Q psy15208 146 --------------K-----W-------------------------------------LIPEVPKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 146 --------------~-----~-------------------------------------~l~~i~~PvLiIhG~~D~iVP~ 169 (1027)
. + .+.++++|+|++||++|.++|+
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~ 295 (349)
T PLN02385 216 LANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDP 295 (349)
T ss_pred HHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccCh
Confidence 0 0 0345789999999999999999
Q ss_pred HHHHhhhCCCC---CceEeecc--ccC-CCCccccchhhhhhHHH
Q psy15208 170 KDVFLWANPLD---IPVVVIPE--SVS-EGHPDKIADQISDAILD 208 (1027)
Q Consensus 170 ~~~~~l~~~~~---~~~L~t~E--sv~-~GHPdkvaDqIsdaILD 208 (1027)
+.+..+++.+. ......++ |.. .+.|+...+++.+.+++
T Consensus 296 ~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~ 340 (349)
T PLN02385 296 SVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIIS 340 (349)
T ss_pred HHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHH
Confidence 99887766542 23333332 222 24555544445555554
|
|
| >KOG1455|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-17 Score=180.62 Aligned_cols=195 Identities=21% Similarity=0.232 Sum_probs=152.6
Q ss_pred EEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---
Q psy15208 8 FNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--- 83 (1027)
Q Consensus 8 i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--- 83 (1027)
-.+.+++| .+.+..|.|... .+++..|+++||++.+.+ ..|+.++..|+..||.|+++|++|||.|+|..
T Consensus 30 ~~~~n~rG~~lft~~W~p~~~--~~pr~lv~~~HG~g~~~s----~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi 103 (313)
T KOG1455|consen 30 SFFTNPRGAKLFTQSWLPLSG--TEPRGLVFLCHGYGEHSS----WRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYV 103 (313)
T ss_pred eeEEcCCCCEeEEEecccCCC--CCCceEEEEEcCCcccch----hhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccC
Confidence 45777888 899999999652 257889999999865542 35788999999999999999999999999743
Q ss_pred CCccchHHHHHHHHHHHHH--hCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC-----------------
Q psy15208 84 DSGNGETDDMEILLRYIQK--KYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV----------------- 144 (1027)
Q Consensus 84 ~~~~~~~~Dv~avl~~L~~--~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~----------------- 144 (1027)
+++...++|+...++.+.. .++..|.+|+||||||++++.++.+.|. ..+|+|+++|..
T Consensus 104 ~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~--~w~G~ilvaPmc~i~~~~kp~p~v~~~l~ 181 (313)
T KOG1455|consen 104 PSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPN--FWDGAILVAPMCKISEDTKPHPPVISILT 181 (313)
T ss_pred CcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCc--ccccceeeecccccCCccCCCcHHHHHHH
Confidence 5677889999998887554 4567799999999999999999999888 579999999731
Q ss_pred ------CcC--------------------------------------------------CCCCCCCcEEEEEeCCCCCCC
Q psy15208 145 ------KKW--------------------------------------------------LIPEVPKNTIIIHGELDEIIP 168 (1027)
Q Consensus 145 ------~~~--------------------------------------------------~l~~i~~PvLiIhG~~D~iVP 168 (1027)
+.| .+.++..|.+++||++|.++.
T Consensus 182 ~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTD 261 (313)
T KOG1455|consen 182 LLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTD 261 (313)
T ss_pred HHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccC
Confidence 111 167889999999999999999
Q ss_pred hHHHHhhhCCCC---CceEeec---cccCCCCccccchhhhhhHHHHH
Q psy15208 169 LKDVFLWANPLD---IPVVVIP---ESVSEGHPDKIADQISDAILDEI 210 (1027)
Q Consensus 169 ~~~~~~l~~~~~---~~~L~t~---Esv~~GHPdkvaDqIsdaILD~~ 210 (1027)
+..+..+++... ......+ ++...|.+++..+.+...|++.+
T Consensus 262 p~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl 309 (313)
T KOG1455|consen 262 PKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWL 309 (313)
T ss_pred cHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHH
Confidence 999998877533 2223333 23334567777777777777654
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=7e-17 Score=179.31 Aligned_cols=164 Identities=17% Similarity=0.146 Sum_probs=129.2
Q ss_pred EEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCCC
Q psy15208 6 KFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGV-GASSGTY 83 (1027)
Q Consensus 6 ~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGh-G~S~g~~ 83 (1027)
....+.+.+| +|.+++..|++. ...+.++||++||++ +... .+..++++|+++||.|+.+|+||| |.|++.+
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~-~~~~~~~vIi~HGf~---~~~~--~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~ 83 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKEN-SPKKNNTILIASGFA---RRMD--HFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI 83 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCccc-CCCCCCEEEEeCCCC---CChH--HHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc
Confidence 3456788888 899999988631 135678999999984 3432 488999999999999999999998 9998865
Q ss_pred C--CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC----------c-----
Q psy15208 84 D--SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK----------K----- 146 (1027)
Q Consensus 84 ~--~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~----------~----- 146 (1027)
. +......|+.++++|++.+ ...+++|+||||||.+|+..|... +++++|+.+|... .
T Consensus 84 ~~~t~s~g~~Dl~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~~----~v~~lI~~sp~~~l~d~l~~~~~~~~~~~ 158 (307)
T PRK13604 84 DEFTMSIGKNSLLTVVDWLNTR-GINNLGLIAASLSARIAYEVINEI----DLSFLITAVGVVNLRDTLERALGYDYLSL 158 (307)
T ss_pred ccCcccccHHHHHHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcCC----CCCEEEEcCCcccHHHHHHHhhhcccccC
Confidence 2 2234589999999999886 345799999999999997777632 3889999998744 0
Q ss_pred -C----------------------------C--------CCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 147 -W----------------------------L--------IPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 147 -~----------------------------~--------l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
+ . ...++.|+|++||++|.+||++.+..+++.++
T Consensus 159 p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~ 229 (307)
T PRK13604 159 PIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIR 229 (307)
T ss_pred cccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhc
Confidence 0 0 22456999999999999999999988877553
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.7e-16 Score=181.82 Aligned_cols=196 Identities=17% Similarity=0.100 Sum_probs=141.2
Q ss_pred CceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 3 SNTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 3 m~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
...+.+.|+..+| ++.++++.|+. ..+.|+||++||+. +... ..|..+++.|+++||.|+++|+||||.|.+
T Consensus 166 ~~~e~v~i~~~~g~~l~g~l~~P~~---~~~~P~Vli~gG~~---~~~~-~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~ 238 (414)
T PRK05077 166 GELKELEFPIPGGGPITGFLHLPKG---DGPFPTVLVCGGLD---SLQT-DYYRLFRDYLAPRGIAMLTIDMPSVGFSSK 238 (414)
T ss_pred CceEEEEEEcCCCcEEEEEEEECCC---CCCccEEEEeCCcc---cchh-hhHHHHHHHHHhCCCEEEEECCCCCCCCCC
Confidence 3467788999899 89999999974 35678888877752 2222 246778999999999999999999999976
Q ss_pred CCCCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC------------
Q psy15208 82 TYDSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------------ 147 (1027)
Q Consensus 82 ~~~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------------ 147 (1027)
.... ........++++++.... +..+++++||||||.+++.+|..+|+ +++++|+++|....+
T Consensus 239 ~~~~-~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~--ri~a~V~~~~~~~~~~~~~~~~~~~p~ 315 (414)
T PRK05077 239 WKLT-QDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP--RLKAVACLGPVVHTLLTDPKRQQQVPE 315 (414)
T ss_pred CCcc-ccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc--CceEEEEECCccchhhcchhhhhhchH
Confidence 3211 122233357788887653 34579999999999999999999887 799999998754200
Q ss_pred ---------------------------C-------CCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCC-ceEeeccccCC
Q psy15208 148 ---------------------------L-------IPEVPKNTIIIHGELDEIIPLKDVFLWANPLDI-PVVVIPESVSE 192 (1027)
Q Consensus 148 ---------------------------~-------l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~-~~L~t~Esv~~ 192 (1027)
. ..++++|+|++||++|+++|++.+..+.+.... ..+..++....
T Consensus 316 ~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~~~~ 395 (414)
T PRK05077 316 MYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFKPVY 395 (414)
T ss_pred HHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCCCcc
Confidence 0 135789999999999999999999987765533 33444443333
Q ss_pred CCccccchhhhhhHHH
Q psy15208 193 GHPDKIADQISDAILD 208 (1027)
Q Consensus 193 GHPdkvaDqIsdaILD 208 (1027)
..+++..+.+.+++.+
T Consensus 396 e~~~~~~~~i~~wL~~ 411 (414)
T PRK05077 396 RNFDKALQEISDWLED 411 (414)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 4555555555555543
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.1e-16 Score=179.35 Aligned_cols=124 Identities=17% Similarity=0.144 Sum_probs=98.9
Q ss_pred EEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---
Q psy15208 8 FNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--- 83 (1027)
Q Consensus 8 i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--- 83 (1027)
..+...+| ++++..|.|.. ++++|||+||++.+ . ..|..++..|+++||+|+++|+||||.|++..
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~-----~~~~vll~HG~~~~---~--~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~ 102 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPH-----HDRVVVICPGRIES---Y--VKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDP 102 (330)
T ss_pred eEEEcCCCCEEEEEEccCCC-----CCcEEEEECCccch---H--HHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCC
Confidence 44555566 78888887643 45789999997432 2 24778898899999999999999999997532
Q ss_pred -----CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 84 -----DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 84 -----~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
.++...+.|+.++++.+....+..+++++||||||.+++.++.++|+ .++++|+++|.
T Consensus 103 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~--~v~~lvl~~p~ 165 (330)
T PRK10749 103 HRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPG--VFDAIALCAPM 165 (330)
T ss_pred CcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCC--CcceEEEECch
Confidence 23456788888888887666566789999999999999999999998 78999999874
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.5e-16 Score=172.14 Aligned_cols=194 Identities=22% Similarity=0.289 Sum_probs=144.3
Q ss_pred EEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC-C---C
Q psy15208 8 FNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS-G---T 82 (1027)
Q Consensus 8 i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~-g---~ 82 (1027)
-.+.+.+| .+++..|.+.. .++.+||++||++.+.+ .|..++..|..+||.|+++|+||||.|. + .
T Consensus 12 ~~~~~~d~~~~~~~~~~~~~----~~~g~Vvl~HG~~Eh~~-----ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~ 82 (298)
T COG2267 12 GYFTGADGTRLRYRTWAAPE----PPKGVVVLVHGLGEHSG-----RYEELADDLAARGFDVYALDLRGHGRSPRGQRGH 82 (298)
T ss_pred ceeecCCCceEEEEeecCCC----CCCcEEEEecCchHHHH-----HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCC
Confidence 34555566 78888888775 34589999999866543 5778999999999999999999999997 3 3
Q ss_pred CCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC------------------
Q psy15208 83 YDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV------------------ 144 (1027)
Q Consensus 83 ~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~------------------ 144 (1027)
..++.....|+.++++.+....+..|++|+||||||.+++.++.+++. +++++|+.+|..
T Consensus 83 ~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~--~i~~~vLssP~~~l~~~~~~~~~~~~~~~~ 160 (298)
T COG2267 83 VDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPP--RIDGLVLSSPALGLGGAILRLILARLALKL 160 (298)
T ss_pred chhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCc--cccEEEEECccccCChhHHHHHHHHHhccc
Confidence 345677889999999988887777899999999999999999999996 799999999841
Q ss_pred ----------Cc----C---------------------------------------------CCCCCCCcEEEEEeCCCC
Q psy15208 145 ----------KK----W---------------------------------------------LIPEVPKNTIIIHGELDE 165 (1027)
Q Consensus 145 ----------~~----~---------------------------------------------~l~~i~~PvLiIhG~~D~ 165 (1027)
.. . ....+..|+|+++|++|.
T Consensus 161 ~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~ 240 (298)
T COG2267 161 LGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDR 240 (298)
T ss_pred ccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCc
Confidence 11 1 023457999999999999
Q ss_pred CCC-hHHHHhhhCCCCC---ceEeeccccCCCCccccc--hhhhhhHHHHHHh
Q psy15208 166 IIP-LKDVFLWANPLDI---PVVVIPESVSEGHPDKIA--DQISDAILDEIFL 212 (1027)
Q Consensus 166 iVP-~~~~~~l~~~~~~---~~L~t~Esv~~GHPdkva--DqIsdaILD~~L~ 212 (1027)
+++ .+...++.+.... .....++..++-+.+.-. ++..+.+.+.+.+
T Consensus 241 vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~ 293 (298)
T COG2267 241 VVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAE 293 (298)
T ss_pred cccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHh
Confidence 999 6777766654432 244444443343434333 5666666554443
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.8e-15 Score=174.18 Aligned_cols=164 Identities=22% Similarity=0.270 Sum_probs=128.3
Q ss_pred EEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--
Q psy15208 7 FFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY-- 83 (1027)
Q Consensus 7 ~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~-- 83 (1027)
...+.++++ .+++..|.|.. ..++++|||+||++. + ...|..+++.|+++||+|+++|+||||.|++..
T Consensus 112 ~~~~~~~~~~~l~~~~~~p~~---~~~~~~Vl~lHG~~~---~--~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~ 183 (395)
T PLN02652 112 TSLFYGARRNALFCRSWAPAA---GEMRGILIIIHGLNE---H--SGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGY 183 (395)
T ss_pred EEEEECCCCCEEEEEEecCCC---CCCceEEEEECCchH---H--HHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCC
Confidence 345666666 78888998864 246789999999743 2 224788999999999999999999999998642
Q ss_pred -CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCC-cCCccEEEEEccCCC----------------
Q psy15208 84 -DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDK-EISIKILILISVAVK---------------- 145 (1027)
Q Consensus 84 -~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~-~~~V~gLVli~p~~~---------------- 145 (1027)
.+.+...+|+..+++++...++..+++++||||||.+++.++. +|+ ..+++++|+.+|...
T Consensus 184 ~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~ 262 (395)
T PLN02652 184 VPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFS 262 (395)
T ss_pred CcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHH
Confidence 2445678999999999988877778999999999999998765 553 126899999987420
Q ss_pred ----cC--------------------------------------------------CCCCCCCcEEEEEeCCCCCCChHH
Q psy15208 146 ----KW--------------------------------------------------LIPEVPKNTIIIHGELDEIIPLKD 171 (1027)
Q Consensus 146 ----~~--------------------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~ 171 (1027)
.+ .+..+++|+|++||++|.++|++.
T Consensus 263 ~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~ 342 (395)
T PLN02652 263 LVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLA 342 (395)
T ss_pred HhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHH
Confidence 00 024567999999999999999999
Q ss_pred HHhhhCCC
Q psy15208 172 VFLWANPL 179 (1027)
Q Consensus 172 ~~~l~~~~ 179 (1027)
+..+++..
T Consensus 343 a~~l~~~~ 350 (395)
T PLN02652 343 SQDLYNEA 350 (395)
T ss_pred HHHHHHhc
Confidence 99886653
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.4e-15 Score=165.67 Aligned_cols=180 Identities=19% Similarity=0.212 Sum_probs=122.9
Q ss_pred ecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCccc
Q psy15208 11 NGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGNG 88 (1027)
Q Consensus 11 ~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~~ 88 (1027)
+..+.++++..+... ...++|||+||++. +. ..|..+++.|.+ +|+|+++|+||||.|+... .+.+.
T Consensus 8 ~~~~~~~~~~~~~~~-----~~~~plvllHG~~~---~~--~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~ 76 (276)
T TIGR02240 8 DLDGQSIRTAVRPGK-----EGLTPLLIFNGIGA---NL--ELVFPFIEALDP-DLEVIAFDVPGVGGSSTPRHPYRFPG 76 (276)
T ss_pred ccCCcEEEEEEecCC-----CCCCcEEEEeCCCc---ch--HHHHHHHHHhcc-CceEEEECCCCCCCCCCCCCcCcHHH
Confidence 333446666544221 12357899999743 32 257888998865 7999999999999997532 23456
Q ss_pred hHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC----------------------c
Q psy15208 89 ETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK----------------------K 146 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~----------------------~ 146 (1027)
+++|+.++++.+. ..+++|+||||||.+++.+|.++|+ +++++|+++++.. .
T Consensus 77 ~~~~~~~~i~~l~----~~~~~LvG~S~GG~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (276)
T TIGR02240 77 LAKLAARMLDYLD----YGQVNAIGVSWGGALAQQFAHDYPE--RCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQP 150 (276)
T ss_pred HHHHHHHHHHHhC----cCceEEEEECHHHHHHHHHHHHCHH--HhhheEEeccCCccccCCCchhHHHHhcCchhhhcc
Confidence 7778777777763 3479999999999999999999998 7999999875320 0
Q ss_pred ---------C-----------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhh
Q psy15208 147 ---------W-----------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWA 176 (1027)
Q Consensus 147 ---------~-----------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~ 176 (1027)
+ .+..+++|+++++|++|+++|++....+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~ 230 (276)
T TIGR02240 151 SHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLA 230 (276)
T ss_pred ccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHH
Confidence 0 02356789999999999999999988777
Q ss_pred CCCCCceEeeccccCCCCccccchhhhhhHHH
Q psy15208 177 NPLDIPVVVIPESVSEGHPDKIADQISDAILD 208 (1027)
Q Consensus 177 ~~~~~~~L~t~Esv~~GHPdkvaDqIsdaILD 208 (1027)
+.+....+...+. ++..+....+.+.+.+.+
T Consensus 231 ~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~ 261 (276)
T TIGR02240 231 WRIPNAELHIIDD-GHLFLITRAEAVAPIIMK 261 (276)
T ss_pred HhCCCCEEEEEcC-CCchhhccHHHHHHHHHH
Confidence 6554433322232 222223333445555554
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-14 Score=162.39 Aligned_cols=99 Identities=14% Similarity=0.200 Sum_probs=77.5
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC----CccchHHHHHHHHHHHHHhCCCCc
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD----SGNGETDDMEILLRYIQKKYPYLP 108 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~----~~~~~~~Dv~avl~~L~~~~~~~p 108 (1027)
.|+|||+||++. +. ..|..+++.|++.||+|+++|+||||.|..... +....++|+.++++.+ +..+
T Consensus 46 ~~~lvliHG~~~---~~--~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l----~~~~ 116 (302)
T PRK00870 46 GPPVLLLHGEPS---WS--YLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL----DLTD 116 (302)
T ss_pred CCEEEEECCCCC---ch--hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc----CCCC
Confidence 468899999743 22 258889999988899999999999999975321 2344555555555443 4458
Q ss_pred EEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 109 IILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 109 viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
++|+||||||.+++.++.++|+ +++++|++++
T Consensus 117 v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~ 148 (302)
T PRK00870 117 VTLVCQDWGGLIGLRLAAEHPD--RFARLVVANT 148 (302)
T ss_pred EEEEEEChHHHHHHHHHHhChh--heeEEEEeCC
Confidence 9999999999999999999998 7999998875
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.9e-15 Score=160.11 Aligned_cols=142 Identities=17% Similarity=0.174 Sum_probs=101.0
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCc---cchHHHHHHHHHHHHHhCCCCcE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSG---NGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~---~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
.|.|||+||++.+..++. .+......|++.||+|+++|+||||.|+....+. ...++|+.++++.+ ...++
T Consensus 30 ~~~ivllHG~~~~~~~~~--~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~ 103 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGGWS--NYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL----DIEKA 103 (282)
T ss_pred CCeEEEECCCCCchhhHH--HHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc----CCCCe
Confidence 357899999854322211 1223345676779999999999999998642111 12355665555544 44589
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC--------------------------------------------
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK-------------------------------------------- 145 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-------------------------------------------- 145 (1027)
+++||||||.+++.++.++|+ +++++|++++...
T Consensus 104 ~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (282)
T TIGR03343 104 HLVGNSMGGATALNFALEYPD--RIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITE 181 (282)
T ss_pred eEEEECchHHHHHHHHHhChH--hhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCcH
Confidence 999999999999999999998 7999998875310
Q ss_pred -----cC-----------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 146 -----KW-----------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 146 -----~~-----------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
.| .+..+++|+++++|++|.++|++.+..+++.++..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~ 252 (282)
T TIGR03343 182 ELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDA 252 (282)
T ss_pred HHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCC
Confidence 00 02346789999999999999999888777765433
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=8e-15 Score=158.24 Aligned_cols=140 Identities=17% Similarity=0.183 Sum_probs=107.1
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-CCccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY-DSGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~-~~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
+.+|+|||+||++ ++. ..|..++..|++ +|+|+++|+||||.|.... -+...+++|+.++++++ ...++
T Consensus 14 ~~~~~iv~lhG~~---~~~--~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l----~~~~~ 83 (255)
T PRK10673 14 HNNSPIVLVHGLF---GSL--DNLGVLARDLVN-DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDAL----QIEKA 83 (255)
T ss_pred CCCCCEEEECCCC---Cch--hHHHHHHHHHhh-CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----CCCce
Confidence 4578899999974 333 257788888875 7999999999999998532 24456777888877765 33479
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-------------------------------------------
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK------------------------------------------- 146 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~------------------------------------------- 146 (1027)
+|+||||||.+++.+|.++|+ +++++|++++.+..
T Consensus 84 ~lvGhS~Gg~va~~~a~~~~~--~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (255)
T PRK10673 84 TFIGHSMGGKAVMALTALAPD--RIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQF 161 (255)
T ss_pred EEEEECHHHHHHHHHHHhCHh--hcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHH
Confidence 999999999999999999998 79999987532100
Q ss_pred ---------C------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 147 ---------W------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 147 ---------~------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
+ .+..+++|+|+++|++|..++++....+.+.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~ 224 (255)
T PRK10673 162 LLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQA 224 (255)
T ss_pred HHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCc
Confidence 0 02345689999999999999999888777765433
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-14 Score=155.18 Aligned_cols=139 Identities=19% Similarity=0.271 Sum_probs=103.1
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---CccchHHHHHHHHHHHHHhCCCCc
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD---SGNGETDDMEILLRYIQKKYPYLP 108 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~---~~~~~~~Dv~avl~~L~~~~~~~p 108 (1027)
..|+|||+||++. +. ..|..+++.|.+ +|+|+++|+||||.|..... +....+.|+.++++.+ ...+
T Consensus 12 ~~~~iv~lhG~~~---~~--~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~----~~~~ 81 (257)
T TIGR03611 12 DAPVVVLSSGLGG---SG--SYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL----NIER 81 (257)
T ss_pred CCCEEEEEcCCCc---ch--hHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh----CCCc
Confidence 4688999999843 32 257778887865 89999999999999976432 2334455555555443 3347
Q ss_pred EEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-----------------------------------C------
Q psy15208 109 IILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-----------------------------------W------ 147 (1027)
Q Consensus 109 viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-----------------------------------~------ 147 (1027)
++++||||||.+++.++.++|+ .++++|++++.... |
T Consensus 82 ~~l~G~S~Gg~~a~~~a~~~~~--~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (257)
T TIGR03611 82 FHFVGHALGGLIGLQLALRYPE--RLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAA 159 (257)
T ss_pred EEEEEechhHHHHHHHHHHChH--HhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccch
Confidence 9999999999999999999988 78999988752110 0
Q ss_pred ---------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 148 ---------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 148 ---------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
.+..+++|+++++|++|.++|++.+..+.+..+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 227 (257)
T TIGR03611 160 RLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNA 227 (257)
T ss_pred hhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCc
Confidence 03356799999999999999999988777765433
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.62 E-value=1e-14 Score=162.05 Aligned_cols=98 Identities=11% Similarity=0.052 Sum_probs=77.7
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---------CCccchHHHHHHHHHHHHHh
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---------DSGNGETDDMEILLRYIQKK 103 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---------~~~~~~~~Dv~avl~~L~~~ 103 (1027)
.|+|||+||++. +. ..|+.+++.|+++ |+|+++|+||||.|+... .+.+.+++|+.++++.+.
T Consensus 29 ~~~vlllHG~~~---~~--~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~-- 100 (294)
T PLN02824 29 GPALVLVHGFGG---NA--DHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVV-- 100 (294)
T ss_pred CCeEEEECCCCC---Ch--hHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhc--
Confidence 367899999853 32 2588899999875 799999999999998531 233455666666666553
Q ss_pred CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 104 YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 104 ~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
.++++|+||||||.+++.+|.++|+ +++++|++++
T Consensus 101 --~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lili~~ 135 (294)
T PLN02824 101 --GDPAFVICNSVGGVVGLQAAVDAPE--LVRGVMLINI 135 (294)
T ss_pred --CCCeEEEEeCHHHHHHHHHHHhChh--heeEEEEECC
Confidence 3589999999999999999999999 7999999875
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.5e-15 Score=168.19 Aligned_cols=128 Identities=20% Similarity=0.228 Sum_probs=97.6
Q ss_pred EecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChH-----------------HH----HHHHHHHHhCCcE
Q psy15208 10 INGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNK-----------------VV----QTLVRVMLSLGYI 67 (1027)
Q Consensus 10 I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~-----------------~~----~~la~~La~~Gy~ 67 (1027)
+.+.+| +|+++.|.|+. ++++|+++||++.|.+..--. +| ..+++.|+++||.
T Consensus 2 ~~~~~g~~l~~~~~~~~~-----~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~ 76 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKN-----AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYS 76 (332)
T ss_pred ccCCCCCeEEEeeeeccC-----CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCc
Confidence 456677 78999998864 678999999998876521000 11 4689999999999
Q ss_pred EEEEcCCCCCCCCCC---C---CCccchHHHHHHHHHHHHH-------------------hCC-CCcEEEEEechhHHHH
Q psy15208 68 SIRMNFRGVGASSGT---Y---DSGNGETDDMEILLRYIQK-------------------KYP-YLPIILAGFSFGTFVQ 121 (1027)
Q Consensus 68 Vla~DlrGhG~S~g~---~---~~~~~~~~Dv~avl~~L~~-------------------~~~-~~pviLVGhSmGG~vA 121 (1027)
|+++|+||||.|.+. . .++...++|+..+++.+.. .++ ..|++|+||||||.++
T Consensus 77 V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~ 156 (332)
T TIGR01607 77 VYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIA 156 (332)
T ss_pred EEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHH
Confidence 999999999998853 1 2456678899888888765 344 5689999999999999
Q ss_pred HHHHHhcCCc------CCccEEEEEcc
Q psy15208 122 AKLQKRLDKE------ISIKILILISV 142 (1027)
Q Consensus 122 l~~A~~~p~~------~~V~gLVli~p 142 (1027)
+.++..++.. ..++|+|+++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~i~g~i~~s~ 183 (332)
T TIGR01607 157 LRLLELLGKSNENNDKLNIKGCISLSG 183 (332)
T ss_pred HHHHHHhccccccccccccceEEEecc
Confidence 9998765431 24788887765
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.8e-14 Score=155.15 Aligned_cols=98 Identities=13% Similarity=0.181 Sum_probs=75.4
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---CccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD---SGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~---~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
.|+|||+||++ ++. ..|..+.+.|++ +|+|+++|+||||.|..... +...++.|+.++++.+ ...++
T Consensus 28 ~~~vv~~hG~~---~~~--~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~----~~~~~ 97 (278)
T TIGR03056 28 GPLLLLLHGTG---AST--HSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE----GLSPD 97 (278)
T ss_pred CCeEEEEcCCC---CCH--HHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc----CCCCc
Confidence 57899999973 332 357888888875 79999999999999975332 3345566666555443 44578
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+|+||||||.+++.++.++|+ +++++|++++
T Consensus 98 ~lvG~S~Gg~~a~~~a~~~p~--~v~~~v~~~~ 128 (278)
T TIGR03056 98 GVIGHSAGAAIALRLALDGPV--TPRMVVGINA 128 (278)
T ss_pred eEEEECccHHHHHHHHHhCCc--ccceEEEEcC
Confidence 999999999999999999998 6888887764
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.8e-14 Score=154.47 Aligned_cols=140 Identities=14% Similarity=0.112 Sum_probs=106.4
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---CCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---DSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
.|||+||++. +. ..|+.+++.|++.||+|+++|+||||.|+... .+...+++|+.++++.+.. ..+++|
T Consensus 5 ~vvllHG~~~---~~--~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~~l 76 (255)
T PLN02965 5 HFVFVHGASH---GA--WCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPP---DHKVIL 76 (255)
T ss_pred EEEEECCCCC---Cc--CcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCC---CCCEEE
Confidence 4899999742 22 24888999998889999999999999997432 2345566777777765421 148999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEccC---CC----------------------------c---------C----
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISVA---VK----------------------------K---------W---- 147 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~---~~----------------------------~---------~---- 147 (1027)
+||||||.+++.++.++|+ +|+++|++++. .. . +
T Consensus 77 vGhSmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (255)
T PLN02965 77 VGHSIGGGSVTEALCKFTD--KISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHY 154 (255)
T ss_pred EecCcchHHHHHHHHhCch--heeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHH
Confidence 9999999999999999998 78999988753 00 0 0
Q ss_pred ---------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceE
Q psy15208 148 ---------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVV 184 (1027)
Q Consensus 148 ---------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L 184 (1027)
.+..+++|+++++|++|.++|++....+.+.+....+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~ 224 (255)
T PLN02965 155 YYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQT 224 (255)
T ss_pred HhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceE
Confidence 0114779999999999999999999888877654433
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.6e-14 Score=159.00 Aligned_cols=132 Identities=19% Similarity=0.335 Sum_probs=107.3
Q ss_pred EEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--
Q psy15208 7 FFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD-- 84 (1027)
Q Consensus 7 ~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~-- 84 (1027)
.++++++.|.+.+.++.|.+ ..++|+|||+||++..... ....|..+++.|+++||.|+++|+||||.|.+...
T Consensus 2 ~~~l~~~~g~~~~~~~~p~~---~~~~~~VlllHG~g~~~~~-~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~ 77 (266)
T TIGR03101 2 PFFLDAPHGFRFCLYHPPVA---VGPRGVVIYLPPFAEEMNK-SRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAA 77 (266)
T ss_pred CEEecCCCCcEEEEEecCCC---CCCceEEEEECCCcccccc-hhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccC
Confidence 36788899999998888875 2457899999998542211 12357778999999999999999999999986532
Q ss_pred CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 85 SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 85 ~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
++..+.+|+..++++++.. +..+++|+||||||.+++.++.++|+ +++++|+++|...
T Consensus 78 ~~~~~~~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p~--~v~~lVL~~P~~~ 135 (266)
T TIGR03101 78 RWDVWKEDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLAA--KCNRLVLWQPVVS 135 (266)
T ss_pred CHHHHHHHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCcc--ccceEEEeccccc
Confidence 3456789999999999875 45689999999999999999999988 7899999998654
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.59 E-value=1e-13 Score=161.17 Aligned_cols=134 Identities=16% Similarity=0.149 Sum_probs=98.6
Q ss_pred EEEEEecCCceEEEEEEec-CCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC
Q psy15208 6 KFFNINGSVGILHCAINFP-SSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD 84 (1027)
Q Consensus 6 ~~i~I~t~dG~I~~~l~~P-~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~ 84 (1027)
++..+.++||.....-|.+ ........+|+||++||++ |+..+.++..++..+.++||+|+++|+||||.|+...+
T Consensus 72 ~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~---g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~ 148 (388)
T PLN02511 72 RRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLT---GGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTP 148 (388)
T ss_pred eEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCC---CCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCc
Confidence 3446778888444433432 1100113478999999973 33333355677777888999999999999999975322
Q ss_pred C--ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 85 S--GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 85 ~--~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
. .....+|+.++++++..+++..+++++||||||.+++.++.++|+...+.+++++++
T Consensus 149 ~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~ 208 (388)
T PLN02511 149 QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCN 208 (388)
T ss_pred CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECC
Confidence 1 246789999999999999888899999999999999999999998434788777664
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=9.4e-14 Score=164.28 Aligned_cols=120 Identities=19% Similarity=0.230 Sum_probs=84.3
Q ss_pred EecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHH-HHHHHH---hCCcEEEEEcCCCCCCCCCCCC-
Q psy15208 10 INGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQT-LVRVML---SLGYISIRMNFRGVGASSGTYD- 84 (1027)
Q Consensus 10 I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~-la~~La---~~Gy~Vla~DlrGhG~S~g~~~- 84 (1027)
+.+++.++++....|++ .+.+|+|||+||++. +.. .|.. +...|+ +.+|+|+++|+||||.|+....
T Consensus 181 ~~~~~~~l~~~~~gp~~---~~~k~~VVLlHG~~~---s~~--~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~ 252 (481)
T PLN03087 181 LSSSNESLFVHVQQPKD---NKAKEDVLFIHGFIS---SSA--FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADS 252 (481)
T ss_pred EeeCCeEEEEEEecCCC---CCCCCeEEEECCCCc---cHH--HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCC
Confidence 34444578888888865 234678999999843 322 3542 345554 3699999999999999985422
Q ss_pred --CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 85 --SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 85 --~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+.+..++|+. ..+....+..+++++||||||.+++.+|.++|+ +++++|++++
T Consensus 253 ~ytl~~~a~~l~---~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe--~V~~LVLi~~ 307 (481)
T PLN03087 253 LYTLREHLEMIE---RSVLERYKVKSFHIVAHSLGCILALALAVKHPG--AVKSLTLLAP 307 (481)
T ss_pred cCCHHHHHHHHH---HHHHHHcCCCCEEEEEECHHHHHHHHHHHhChH--hccEEEEECC
Confidence 2223344442 223333455689999999999999999999999 7999999985
|
|
| >KOG1552|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.6e-14 Score=150.16 Aligned_cols=161 Identities=22% Similarity=0.312 Sum_probs=125.0
Q ss_pred EEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCC
Q psy15208 7 FFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASSGTYD 84 (1027)
Q Consensus 7 ~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~~~ 84 (1027)
-+.+.+..| .+.+..+.|+. ...++++++||.+...| . ...+...|.. ..+.++.+|++|+|.|.|.+
T Consensus 37 v~~~~t~rgn~~~~~y~~~~~----~~~~~lly~hGNa~Dlg---q--~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~p- 106 (258)
T KOG1552|consen 37 VFKVKTSRGNEIVCMYVRPPE----AAHPTLLYSHGNAADLG---Q--MVELFKELSIFLNCNVVSYDYSGYGRSSGKP- 106 (258)
T ss_pred eEEeecCCCCEEEEEEEcCcc----ccceEEEEcCCcccchH---H--HHHHHHHHhhcccceEEEEecccccccCCCc-
Confidence 345667677 66777777765 35689999999743322 1 1122233322 37999999999999999984
Q ss_pred CccchHHHHHHHHHHHHHhC-CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc------------C----
Q psy15208 85 SGNGETDDMEILLRYIQKKY-PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK------------W---- 147 (1027)
Q Consensus 85 ~~~~~~~Dv~avl~~L~~~~-~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~------------~---- 147 (1027)
+..+..+|+.++.++|++.+ +..+++|+|+|||...++.+|++.| ++++|+.+|.... |
T Consensus 107 sE~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~----~~alVL~SPf~S~~rv~~~~~~~~~~~d~f 182 (258)
T KOG1552|consen 107 SERNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP----LAAVVLHSPFTSGMRVAFPDTKTTYCFDAF 182 (258)
T ss_pred ccccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC----cceEEEeccchhhhhhhccCcceEEeeccc
Confidence 66689999999999999999 4678999999999999999999986 6999999986431 1
Q ss_pred ----CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCC
Q psy15208 148 ----LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDI 181 (1027)
Q Consensus 148 ----~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~ 181 (1027)
-++.+++|+|++||++|+++|+++..++.+..+.
T Consensus 183 ~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~ 220 (258)
T KOG1552|consen 183 PNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKE 220 (258)
T ss_pred cccCcceeccCCEEEEecccCceecccccHHHHHhccc
Confidence 1456789999999999999999999877776543
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.4e-13 Score=155.90 Aligned_cols=134 Identities=18% Similarity=0.340 Sum_probs=98.6
Q ss_pred EEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC
Q psy15208 6 KFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDS 85 (1027)
Q Consensus 6 ~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~ 85 (1027)
++..+..+||......|.+... ....+|+||++||++ |+....++..+++.|.++||+|+++|+||||.++.....
T Consensus 32 ~~~~~~~~dg~~~~l~w~~~~~-~~~~~p~vll~HG~~---g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~ 107 (324)
T PRK10985 32 YWQRLELPDGDFVDLAWSEDPA-QARHKPRLVLFHGLE---GSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHR 107 (324)
T ss_pred ceeEEECCCCCEEEEecCCCCc-cCCCCCEEEEeCCCC---CCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcc
Confidence 3445778888544434433211 123578999999984 333334566789999999999999999999987643211
Q ss_pred --ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 86 --GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 86 --~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
......|+..+++++.+.++..+++++||||||.+++.++..+++...+.++|+++++
T Consensus 108 ~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p 167 (324)
T PRK10985 108 IYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAP 167 (324)
T ss_pred eECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCC
Confidence 1245799999999999888878899999999999988888887653347888888765
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.5e-14 Score=148.90 Aligned_cols=138 Identities=20% Similarity=0.250 Sum_probs=102.4
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--CccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD--SGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~--~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
.+|++||+||++. +. ..|..+++.|. .||+|+++|+||||.|..... +...+++|+..+++.+ +..++
T Consensus 12 ~~~~li~~hg~~~---~~--~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~----~~~~v 81 (251)
T TIGR02427 12 GAPVLVFINSLGT---DL--RMWDPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL----GIERA 81 (251)
T ss_pred CCCeEEEEcCccc---ch--hhHHHHHHHhh-cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCce
Confidence 4688999999743 22 24778888886 589999999999999975321 3344556665555544 34479
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc---------------------------------C---------
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK---------------------------------W--------- 147 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~---------------------------------~--------- 147 (1027)
+++||||||.+++.+|.++|+ ++++++++++.... +
T Consensus 82 ~liG~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T TIGR02427 82 VFCGLSLGGLIAQGLAARRPD--RVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLD 159 (251)
T ss_pred EEEEeCchHHHHHHHHHHCHH--HhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHH
Confidence 999999999999999999988 68888887653110 0
Q ss_pred ----------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCC
Q psy15208 148 ----------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDI 181 (1027)
Q Consensus 148 ----------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~ 181 (1027)
.+.++++|+++++|++|.++|++....+.+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~ 221 (251)
T TIGR02427 160 LYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPG 221 (251)
T ss_pred HHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCC
Confidence 0234678999999999999999988877665543
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.3e-13 Score=153.25 Aligned_cols=98 Identities=12% Similarity=0.237 Sum_probs=77.9
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--CccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD--SGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~--~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
.++|||+||++. +. ..|+.+++.|++++ +|+++|+||||.|+.... +...+++|+..+++.+ ...+++
T Consensus 27 g~~vvllHG~~~---~~--~~w~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l----~~~~~~ 96 (295)
T PRK03592 27 GDPIVFLHGNPT---SS--YLWRNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDAL----GLDDVV 96 (295)
T ss_pred CCEEEEECCCCC---CH--HHHHHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCCeE
Confidence 367899999742 22 35888999998865 999999999999985421 3445666666666654 335899
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
++||||||.+++.++.++|+ +++++|++++
T Consensus 97 lvGhS~Gg~ia~~~a~~~p~--~v~~lil~~~ 126 (295)
T PRK03592 97 LVGHDWGSALGFDWAARHPD--RVRGIAFMEA 126 (295)
T ss_pred EEEECHHHHHHHHHHHhChh--heeEEEEECC
Confidence 99999999999999999998 7999999885
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.2e-14 Score=149.07 Aligned_cols=127 Identities=20% Similarity=0.223 Sum_probs=97.9
Q ss_pred cccccccchhhhhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHH
Q psy15208 782 TKSKFDNLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEY 861 (1027)
Q Consensus 782 ~K~~~dn~~g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e 861 (1027)
.|++.......+++.|..-....+..+.|++|+|+|||.||+.+|+++++|||+|+++|+.+.....+...++...++++
T Consensus 8 ~R~~~~~~~~~~~~~W~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~e 87 (178)
T PF02826_consen 8 LRRLPEYHEAQRNGEWASRERFPGRELRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDE 87 (178)
T ss_dssp HTTHHHHHHHHHTTBHHHHTTTTBS-STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHH
T ss_pred HhCHHHHHHHHHcCCCCCCcCCCccccCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhcccccceeeehhh
Confidence 34443333334556663334445667999999999999999999999999999999999988655556778889999999
Q ss_pred HhccCCEEEecCC----CcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 862 AKKYGDIFVTCTG----NYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 862 ~l~~aDvvi~atG----~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+++++|+|+.+.+ |.++|+++.|++||+|+++||+|... -+|.+++.
T Consensus 88 ll~~aDiv~~~~plt~~T~~li~~~~l~~mk~ga~lvN~aRG~-~vde~aL~ 138 (178)
T PF02826_consen 88 LLAQADIVSLHLPLTPETRGLINAEFLAKMKPGAVLVNVARGE-LVDEDALL 138 (178)
T ss_dssp HHHH-SEEEE-SSSSTTTTTSBSHHHHHTSTTTEEEEESSSGG-GB-HHHHH
T ss_pred hcchhhhhhhhhccccccceeeeeeeeeccccceEEEeccchh-hhhhhHHH
Confidence 9999999997654 56999999999999999999999974 45655554
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.3e-13 Score=149.25 Aligned_cols=154 Identities=15% Similarity=0.188 Sum_probs=106.4
Q ss_pred EEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--Cc-------c
Q psy15208 17 LHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD--SG-------N 87 (1027)
Q Consensus 17 I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~--~~-------~ 87 (1027)
+..+.+.|.+. ..++.|+||++||++ ++.. .|..+++.|+++||+|+++|+||||.|..... .. .
T Consensus 12 ~~~~~~~p~~~-~~~~~p~vv~~HG~~---~~~~--~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~ 85 (249)
T PRK10566 12 IEVLHAFPAGQ-RDTPLPTVFFYHGFT---SSKL--VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILL 85 (249)
T ss_pred cceEEEcCCCC-CCCCCCEEEEeCCCC---cccc--hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHH
Confidence 34455566531 123578999999974 3322 46778999999999999999999997642111 11 1
Q ss_pred chHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEE-EEEccCC---------Cc---------
Q psy15208 88 GETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKIL-ILISVAV---------KK--------- 146 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gL-Vli~p~~---------~~--------- 146 (1027)
...+|+..+++++.... +..+++++||||||.+++.++.++|+ +.+. ++.++.. +.
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (249)
T PRK10566 86 QNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPW---VKCVASLMGSGYFTSLARTLFPPLIPETAAQQ 162 (249)
T ss_pred HHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCC---eeEEEEeeCcHHHHHHHHHhcccccccccccH
Confidence 23567777788877653 34579999999999999999998876 4443 3333210 00
Q ss_pred ------------C----CCCCC-CCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 147 ------------W----LIPEV-PKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 147 ------------~----~l~~i-~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
+ .+.++ .+|+|++||++|+++|++.+..+.+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l 212 (249)
T PRK10566 163 AEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQAL 212 (249)
T ss_pred HHHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHH
Confidence 0 12344 689999999999999999988776643
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.1e-13 Score=149.60 Aligned_cols=104 Identities=15% Similarity=0.166 Sum_probs=77.0
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
.+|.|||+||++. +. ..|..++..|.++||+|+++|+||||.|.........+..++..+.+++.......+++|
T Consensus 17 ~~p~vvliHG~~~---~~--~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~l 91 (273)
T PLN02211 17 QPPHFVLIHGISG---GS--WCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVIL 91 (273)
T ss_pred CCCeEEEECCCCC---Cc--CcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 4688999999743 22 248889999988899999999999998864322112333334444444444323458999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+||||||.+++.++.++|+ +++++|++++
T Consensus 92 vGhS~GG~v~~~~a~~~p~--~v~~lv~~~~ 120 (273)
T PLN02211 92 VGHSAGGLSVTQAIHRFPK--KICLAVYVAA 120 (273)
T ss_pred EEECchHHHHHHHHHhChh--heeEEEEecc
Confidence 9999999999999999988 7899998865
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.9e-13 Score=149.90 Aligned_cols=130 Identities=18% Similarity=0.224 Sum_probs=100.4
Q ss_pred eEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCC-CCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 5 TKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPL-FGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 5 ~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~-~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
++.+.+...+.++.+.++.|.+ ..++.||++||+.. +.|+ +..+..+++.|+++||.|+++|+||||.|.+..
T Consensus 2 ~~~~~~~~~~~~l~g~~~~p~~----~~~~~vv~i~gg~~~~~g~--~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~ 75 (274)
T TIGR03100 2 ERALTFSCEGETLVGVLHIPGA----SHTTGVLIVVGGPQYRVGS--HRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN 75 (274)
T ss_pred CeeEEEEcCCcEEEEEEEcCCC----CCCCeEEEEeCCccccCCc--hhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC
Confidence 3457777777789999999875 22345666676432 1222 224567899999999999999999999998764
Q ss_pred CCccchHHHHHHHHHHHHHhCC-CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 84 DSGNGETDDMEILLRYIQKKYP-YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 84 ~~~~~~~~Dv~avl~~L~~~~~-~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
........|+.+++++++...+ ..+++++||||||.+++.++... + +++++|+++|.
T Consensus 76 ~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~-~--~v~~lil~~p~ 133 (274)
T TIGR03100 76 LGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD-L--RVAGLVLLNPW 133 (274)
T ss_pred CCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC-C--CccEEEEECCc
Confidence 4556678999999999987653 45699999999999999998653 3 69999999986
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.7e-13 Score=142.33 Aligned_cols=102 Identities=18% Similarity=0.247 Sum_probs=75.5
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-CccchHHHHHHHHHHHHHhCCCCcEEEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD-SGNGETDDMEILLRYIQKKYPYLPIILA 112 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~-~~~~~~~Dv~avl~~L~~~~~~~pviLV 112 (1027)
|+|||+||++ ++.. .|..+++.|+ +||+|+++|+||||.|+.... ......+.+..++..+....+..+++++
T Consensus 2 ~~vv~~hG~~---~~~~--~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 75 (251)
T TIGR03695 2 PVLVFLHGFL---GSGA--DWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLV 75 (251)
T ss_pred CEEEEEcCCC---Cchh--hHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 6789999974 3332 4788999998 799999999999999975321 1112222222224444445556689999
Q ss_pred EechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 113 GFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 113 GhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
||||||.+++.++.++|+ .+++++++++.
T Consensus 76 G~S~Gg~ia~~~a~~~~~--~v~~lil~~~~ 104 (251)
T TIGR03695 76 GYSMGGRIALYYALQYPE--RVQGLILESGS 104 (251)
T ss_pred EeccHHHHHHHHHHhCch--heeeeEEecCC
Confidence 999999999999999998 78999988753
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.3e-13 Score=155.25 Aligned_cols=98 Identities=17% Similarity=0.215 Sum_probs=74.8
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---CccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD---SGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~---~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
.|+|||+||++. +. ..|..++..|++ +|+|+++|+||||.|+.... +...+++|+.++++.+ ...++
T Consensus 88 gp~lvllHG~~~---~~--~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l----~~~~~ 157 (360)
T PLN02679 88 GPPVLLVHGFGA---SI--PHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV----VQKPT 157 (360)
T ss_pred CCeEEEECCCCC---CH--HHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh----cCCCe
Confidence 467899999843 32 358888888876 89999999999999975421 2344556666655543 33589
Q ss_pred EEEEechhHHHHHHHHHh-cCCcCCccEEEEEcc
Q psy15208 110 ILAGFSFGTFVQAKLQKR-LDKEISIKILILISV 142 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~-~p~~~~V~gLVli~p 142 (1027)
+|+||||||.+++.++.. +|+ +++++|++++
T Consensus 158 ~lvGhS~Gg~ia~~~a~~~~P~--rV~~LVLi~~ 189 (360)
T PLN02679 158 VLIGNSVGSLACVIAASESTRD--LVRGLVLLNC 189 (360)
T ss_pred EEEEECHHHHHHHHHHHhcChh--hcCEEEEECC
Confidence 999999999999998874 687 7999998875
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.8e-13 Score=147.14 Aligned_cols=134 Identities=16% Similarity=0.200 Sum_probs=98.4
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAG 113 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVG 113 (1027)
|+|||+||++. +. ..|..+.+.|.+ .|+|+++|+||||.|.... ..... + +++.+... ...+++|+|
T Consensus 14 ~~ivllHG~~~---~~--~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~--~~~~~-~---~~~~l~~~-~~~~~~lvG 80 (256)
T PRK10349 14 VHLVLLHGWGL---NA--EVWRCIDEELSS-HFTLHLVDLPGFGRSRGFG--ALSLA-D---MAEAVLQQ-APDKAIWLG 80 (256)
T ss_pred CeEEEECCCCC---Ch--hHHHHHHHHHhc-CCEEEEecCCCCCCCCCCC--CCCHH-H---HHHHHHhc-CCCCeEEEE
Confidence 46899999743 32 258889999976 6999999999999997532 11222 2 22233222 345799999
Q ss_pred echhHHHHHHHHHhcCCcCCccEEEEEccCCC--------cC--------------------------------------
Q psy15208 114 FSFGTFVQAKLQKRLDKEISIKILILISVAVK--------KW-------------------------------------- 147 (1027)
Q Consensus 114 hSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~--------~~-------------------------------------- 147 (1027)
|||||.+++.+|.++|+ +++++|++++++. .+
T Consensus 81 hS~Gg~ia~~~a~~~p~--~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (256)
T PRK10349 81 WSLGGLVASQIALTHPE--RVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDA 158 (256)
T ss_pred ECHHHHHHHHHHHhChH--hhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHH
Confidence 99999999999999998 7999999876311 00
Q ss_pred --------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 148 --------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 148 --------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
.+..+++|+++++|+.|.++|.+.+..+.+.++..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~ 225 (256)
T PRK10349 159 RALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHS 225 (256)
T ss_pred HHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCC
Confidence 03356799999999999999998888776665443
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.52 E-value=9e-13 Score=142.48 Aligned_cols=100 Identities=22% Similarity=0.270 Sum_probs=73.7
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-----CccchHHHHHHHHHHHHHhCCCC
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD-----SGNGETDDMEILLRYIQKKYPYL 107 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~-----~~~~~~~Dv~avl~~L~~~~~~~ 107 (1027)
+++|||+||++ +++ ...|..+...|.+.||+|+++|+||||.|..... +...+++|+.++++.+ ...
T Consensus 25 ~~~vl~~hG~~--g~~--~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 96 (288)
T TIGR01250 25 KIKLLLLHGGP--GMS--HEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL----GLD 96 (288)
T ss_pred CCeEEEEcCCC--Ccc--HHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc----CCC
Confidence 57789999963 222 2245566666766699999999999999985421 2334555555554433 444
Q ss_pred cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 108 PIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 108 pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+++++||||||.+++.++..+|+ +++++|+.++
T Consensus 97 ~~~liG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~ 129 (288)
T TIGR01250 97 KFYLLGHSWGGMLAQEYALKYGQ--HLKGLIISSM 129 (288)
T ss_pred cEEEEEeehHHHHHHHHHHhCcc--ccceeeEecc
Confidence 79999999999999999999998 7899998765
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.1e-13 Score=143.28 Aligned_cols=135 Identities=26% Similarity=0.376 Sum_probs=102.2
Q ss_pred EEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC----CccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 36 VLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD----SGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 36 VVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~----~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
|||+||++. +. ..|..+++.|+ +||+|+++|+||||.|..... +....+.|+.++++.+ ...++++
T Consensus 1 vv~~hG~~~---~~--~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~l 70 (228)
T PF12697_consen 1 VVFLHGFGG---SS--ESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL----GIKKVIL 70 (228)
T ss_dssp EEEE-STTT---TG--GGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT----TTSSEEE
T ss_pred eEEECCCCC---CH--HHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc----ccccccc
Confidence 699999743 32 35788999995 799999999999999986431 2233455555544443 3358999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEccCCC-------c----C---------------------------------
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISVAVK-------K----W--------------------------------- 147 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-------~----~--------------------------------- 147 (1027)
+|||+||.+++.++.++|+ +++++|+++|... . +
T Consensus 71 vG~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (228)
T PF12697_consen 71 VGHSMGGMIALRLAARYPD--RVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLI 148 (228)
T ss_dssp EEETHHHHHHHHHHHHSGG--GEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred ccccccccccccccccccc--ccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccc
Confidence 9999999999999999998 7999999998762 0 0
Q ss_pred ----------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 148 ----------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 148 ----------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
.+..+++|+++++|++|.++|.+....+.+.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~ 205 (228)
T PF12697_consen 149 RSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNA 205 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTE
T ss_pred cccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCC
Confidence 02456899999999999999988888777644433
|
... |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.51 E-value=2e-13 Score=143.62 Aligned_cols=135 Identities=17% Similarity=0.252 Sum_probs=99.1
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILA 112 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLV 112 (1027)
+|+|||+||++. +. ..|..+++.|++ +|+|+++|+||||.|..... .++..+.+.+....+ .+++++
T Consensus 4 ~~~iv~~HG~~~---~~--~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~------~~~~~~~~~~~~~~~-~~~~lv 70 (245)
T TIGR01738 4 NVHLVLIHGWGM---NA--EVFRCLDEELSA-HFTLHLVDLPGHGRSRGFGP------LSLADAAEAIAAQAP-DPAIWL 70 (245)
T ss_pred CceEEEEcCCCC---ch--hhHHHHHHhhcc-CeEEEEecCCcCccCCCCCC------cCHHHHHHHHHHhCC-CCeEEE
Confidence 367899999743 32 257888998875 79999999999999875421 122333333333322 489999
Q ss_pred EechhHHHHHHHHHhcCCcCCccEEEEEccCCC-----cC----------------------------------------
Q psy15208 113 GFSFGTFVQAKLQKRLDKEISIKILILISVAVK-----KW---------------------------------------- 147 (1027)
Q Consensus 113 GhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-----~~---------------------------------------- 147 (1027)
||||||.+++.++.++|+ +++++|++++.+. .|
T Consensus 71 G~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (245)
T TIGR01738 71 GWSLGGLVALHIAATHPD--RVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQ 148 (245)
T ss_pred EEcHHHHHHHHHHHHCHH--hhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccch
Confidence 999999999999999998 7899998865321 00
Q ss_pred ----------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 148 ----------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 148 ----------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
.+..+++|+++++|++|.++|++....+.+.+...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~ 217 (245)
T TIGR01738 149 DARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHS 217 (245)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCC
Confidence 02457799999999999999999888776655433
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.8e-13 Score=133.39 Aligned_cols=130 Identities=28% Similarity=0.396 Sum_probs=103.8
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHH-hCCCCcEEEEE
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQK-KYPYLPIILAG 113 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~-~~~~~pviLVG 113 (1027)
+|||+||++ ++ ...|..+++.|+++||.|+.+|+|++|.+.+ ..++..+++++.. ..+..+++|+|
T Consensus 1 ~vv~~HG~~---~~--~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~l~G 67 (145)
T PF12695_consen 1 VVVLLHGWG---GS--RRDYQPLAEALAEQGYAVVAFDYPGHGDSDG--------ADAVERVLADIRAGYPDPDRIILIG 67 (145)
T ss_dssp EEEEECTTT---TT--THHHHHHHHHHHHTTEEEEEESCTTSTTSHH--------SHHHHHHHHHHHHHHCTCCEEEEEE
T ss_pred CEEEECCCC---CC--HHHHHHHHHHHHHCCCEEEEEecCCCCccch--------hHHHHHHHHHHHhhcCCCCcEEEEE
Confidence 489999974 33 2357899999999999999999999998843 2366667776533 23556899999
Q ss_pred echhHHHHHHHHHhcCCcCCccEEEEEccCCCcCCCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 114 FSFGTFVQAKLQKRLDKEISIKILILISVAVKKWLIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 114 hSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
|||||.+++.++.+.+ +++++|+++|.+....+.....|+++++|++|+++|++....+.+.++
T Consensus 68 ~S~Gg~~a~~~~~~~~---~v~~~v~~~~~~~~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~ 131 (145)
T PF12695_consen 68 HSMGGAIAANLAARNP---RVKAVVLLSPYPDSEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP 131 (145)
T ss_dssp ETHHHHHHHHHHHHST---TESEEEEESESSGCHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC
T ss_pred EccCcHHHHHHhhhcc---ceeEEEEecCccchhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC
Confidence 9999999999999874 599999999954433467788999999999999999999887766544
|
... |
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.8e-13 Score=154.28 Aligned_cols=98 Identities=13% Similarity=0.129 Sum_probs=75.4
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--CccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD--SGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~--~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
.|.|||+||++ ++. ..|..+...|++ +|+|+++|+||||.|++... +...+.+|+.++++.+. ..+++
T Consensus 86 g~~vvliHG~~---~~~--~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~----~~~~~ 155 (354)
T PLN02578 86 GLPIVLIHGFG---ASA--FHWRYNIPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVV----KEPAV 155 (354)
T ss_pred CCeEEEECCCC---CCH--HHHHHHHHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhc----cCCeE
Confidence 35689999974 332 357778888875 79999999999999986532 22334556666655543 34899
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
++||||||.+++.+|.++|+ +++++|++++
T Consensus 156 lvG~S~Gg~ia~~~A~~~p~--~v~~lvLv~~ 185 (354)
T PLN02578 156 LVGNSLGGFTALSTAVGYPE--LVAGVALLNS 185 (354)
T ss_pred EEEECHHHHHHHHHHHhChH--hcceEEEECC
Confidence 99999999999999999998 7999998764
|
|
| >KOG4391|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.3e-13 Score=140.35 Aligned_cols=200 Identities=21% Similarity=0.231 Sum_probs=145.1
Q ss_pred CCceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q psy15208 2 ISNTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS 80 (1027)
Q Consensus 2 ~m~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~ 80 (1027)
.|+-+++++.++|. ++++++...+ ..+|+++++|+. +|++.+. ..-..-.+...+.+|+.+++||+|.|.
T Consensus 51 n~pye~i~l~T~D~vtL~a~~~~~E-----~S~pTlLyfh~N---AGNmGhr-~~i~~~fy~~l~mnv~ivsYRGYG~S~ 121 (300)
T KOG4391|consen 51 NMPYERIELRTRDKVTLDAYLMLSE-----SSRPTLLYFHAN---AGNMGHR-LPIARVFYVNLKMNVLIVSYRGYGKSE 121 (300)
T ss_pred CCCceEEEEEcCcceeEeeeeeccc-----CCCceEEEEccC---CCcccch-hhHHHHHHHHcCceEEEEEeeccccCC
Confidence 46677889999887 7888877743 378999999996 5666542 222222345568999999999999999
Q ss_pred CCCCCccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc------------
Q psy15208 81 GTYDSGNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK------------ 146 (1027)
Q Consensus 81 g~~~~~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~------------ 146 (1027)
|. ++.+++.-|.+++++++..+.. ..+++|.|.|.||++|..+|++..+ ++.++++-......
T Consensus 122 Gs-psE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~--ri~~~ivENTF~SIp~~~i~~v~p~~ 198 (300)
T KOG4391|consen 122 GS-PSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD--RISAIIVENTFLSIPHMAIPLVFPFP 198 (300)
T ss_pred CC-ccccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchh--heeeeeeechhccchhhhhheeccch
Confidence 98 5778899999999999988643 4469999999999999999999877 78999987754221
Q ss_pred ------------C----CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceEeeccccCCCCcc-ccchhhhhhHHHH
Q psy15208 147 ------------W----LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVVVIPESVSEGHPD-KIADQISDAILDE 209 (1027)
Q Consensus 147 ------------~----~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L~t~Esv~~GHPd-kvaDqIsdaILD~ 209 (1027)
| .+...+.|.|++-|.+|++|||-..+.+++..........+...-.|.| .++|.-.++|.|.
T Consensus 199 ~k~i~~lc~kn~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~dGYfq~i~dF 278 (300)
T KOG4391|consen 199 MKYIPLLCYKNKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWICDGYFQAIEDF 278 (300)
T ss_pred hhHHHHHHHHhhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEeccHHHHHHHH
Confidence 1 1446679999999999999999999888775432211111111134554 4455555555554
Q ss_pred HHhh
Q psy15208 210 IFLK 213 (1027)
Q Consensus 210 ~L~~ 213 (1027)
+.+.
T Consensus 279 laE~ 282 (300)
T KOG4391|consen 279 LAEV 282 (300)
T ss_pred HHHh
Confidence 4433
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.1e-13 Score=142.04 Aligned_cols=166 Identities=21% Similarity=0.311 Sum_probs=124.6
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
...|||+||+ .|+.. -.+.++++|.++||.|++|.+||||..+..+ .+...+..|+....++|.+. +...|.
T Consensus 15 ~~AVLllHGF---TGt~~--Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~ 88 (243)
T COG1647 15 NRAVLLLHGF---TGTPR--DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIA 88 (243)
T ss_pred CEEEEEEecc---CCCcH--HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEE
Confidence 3678999998 44543 3788999999999999999999999988433 34567899999999999854 334699
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc--C-----------------------------------------
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK--W----------------------------------------- 147 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~--~----------------------------------------- 147 (1027)
++|.||||.+++.+|.++| ++++|.++++... |
T Consensus 89 v~GlSmGGv~alkla~~~p----~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~ 164 (243)
T COG1647 89 VVGLSMGGVFALKLAYHYP----PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTA 164 (243)
T ss_pred EEeecchhHHHHHHHhhCC----ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHH
Confidence 9999999999999999996 5899999886441 1
Q ss_pred -----------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC---CceEeeccccCCCCccccchhhhhhHHH
Q psy15208 148 -----------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD---IPVVVIPESVSEGHPDKIADQISDAILD 208 (1027)
Q Consensus 148 -----------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~---~~~L~t~Esv~~GHPdkvaDqIsdaILD 208 (1027)
.+..|..|++++.|.+|+.+|.+.+..+.+... ....+..++.+.-..|+-.+++.+.++.
T Consensus 165 ~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~ 239 (243)
T COG1647 165 QLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVIT 239 (243)
T ss_pred HHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHH
Confidence 156678999999999999999999986665432 2233444442222235555555555543
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.2e-12 Score=145.75 Aligned_cols=117 Identities=11% Similarity=0.149 Sum_probs=81.6
Q ss_pred EEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccc
Q psy15208 9 NINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNG 88 (1027)
Q Consensus 9 ~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~ 88 (1027)
.++..++++++... + ..|+|||+||++. ....|+.+.+.|.+ +|+|+++|+||||.|+... ....
T Consensus 18 ~~~~~~~~i~y~~~---G-----~~~~iv~lHG~~~-----~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~-~~~~ 82 (286)
T PRK03204 18 WFDSSRGRIHYIDE---G-----TGPPILLCHGNPT-----WSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPS-GFGY 82 (286)
T ss_pred EEEcCCcEEEEEEC---C-----CCCEEEEECCCCc-----cHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCC-cccc
Confidence 35555556654432 2 2467999999742 22357788888865 6999999999999997532 1111
Q ss_pred hHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 89 ETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
...+....+..+....+..+++++||||||.+++.++..+|+ +++++|++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~--~v~~lvl~~~ 134 (286)
T PRK03204 83 QIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERAD--RVRGVVLGNT 134 (286)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChh--heeEEEEECc
Confidence 233444434444444455689999999999999999999998 7999998764
|
|
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.47 E-value=8.7e-14 Score=157.02 Aligned_cols=126 Identities=20% Similarity=0.165 Sum_probs=98.1
Q ss_pred cccccccchhhhhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHH
Q psy15208 782 TKSKFDNLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEY 861 (1027)
Q Consensus 782 ~K~~~dn~~g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e 861 (1027)
.|++....-..+++.|+. ....+..+.||||+|+|+|.||+.+|++|++|||+|+++|+...+.......++.+.++++
T Consensus 115 ~R~~~~~~~~~~~g~W~~-~~~~g~el~gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~ 193 (324)
T COG0111 115 ARRIPDADASQRRGEWDR-KAFRGTELAGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDE 193 (324)
T ss_pred hcCchhhHHHHHcCCccc-cccccccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHH
Confidence 344444333456667765 3344668999999999999999999999999999999998754444333344445778999
Q ss_pred HhccCCEEEecCC----CcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 862 AKKYGDIFVTCTG----NYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 862 ~l~~aDvvi~atG----~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.+++||||+.++. |+++|+++.|++||+|++|||++... -+|.++|.
T Consensus 194 lL~~sDiv~lh~PlT~eT~g~i~~~~~a~MK~gailIN~aRG~-vVde~aL~ 244 (324)
T COG0111 194 LLAEADILTLHLPLTPETRGLINAEELAKMKPGAILINAARGG-VVDEDALL 244 (324)
T ss_pred HHhhCCEEEEcCCCCcchhcccCHHHHhhCCCCeEEEECCCcc-eecHHHHH
Confidence 9999999998654 67999999999999999999999984 35655555
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.2e-13 Score=153.45 Aligned_cols=99 Identities=23% Similarity=0.233 Sum_probs=74.0
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
.|+|||+||++ ++.. .|..+.+.|.+ +|+|+++|+||||.|.... .+...++.++..++ ...+..+++
T Consensus 131 ~~~vl~~HG~~---~~~~--~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 200 (371)
T PRK14875 131 GTPVVLIHGFG---GDLN--NWLFNHAALAA-GRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFL----DALGIERAH 200 (371)
T ss_pred CCeEEEECCCC---Cccc--hHHHHHHHHhc-CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHH----HhcCCccEE
Confidence 57899999974 3333 47778888876 6999999999999996432 23333344443333 344545799
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
|+||||||.+++.+|.++|+ +++++|+++|.
T Consensus 201 lvG~S~Gg~~a~~~a~~~~~--~v~~lv~~~~~ 231 (371)
T PRK14875 201 LVGHSMGGAVALRLAARAPQ--RVASLTLIAPA 231 (371)
T ss_pred EEeechHHHHHHHHHHhCch--heeEEEEECcC
Confidence 99999999999999999987 79999998864
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.6e-13 Score=144.42 Aligned_cols=99 Identities=17% Similarity=0.142 Sum_probs=74.0
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-CCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY-DSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~-~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
.|+|||+||++. +. ..|..+++.| + +|+|+++|+||||.|.... .+....+.|+.++++. .+..++++
T Consensus 2 ~p~vvllHG~~~---~~--~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~----~~~~~~~l 70 (242)
T PRK11126 2 LPWLVFLHGLLG---SG--QDWQPVGEAL-P-DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQS----YNILPYWL 70 (242)
T ss_pred CCEEEEECCCCC---Ch--HHHHHHHHHc-C-CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHH----cCCCCeEE
Confidence 467999999843 32 3588888888 3 7999999999999997532 1333445555544443 34568999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+||||||.+++.+|.++|+. +++++++.++.
T Consensus 71 vG~S~Gg~va~~~a~~~~~~-~v~~lvl~~~~ 101 (242)
T PRK11126 71 VGYSLGGRIAMYYACQGLAG-GLCGLIVEGGN 101 (242)
T ss_pred EEECHHHHHHHHHHHhCCcc-cccEEEEeCCC
Confidence 99999999999999999762 49999987643
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.4e-12 Score=144.56 Aligned_cols=120 Identities=18% Similarity=0.129 Sum_probs=77.3
Q ss_pred EEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCcc
Q psy15208 9 NINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGN 87 (1027)
Q Consensus 9 ~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~ 87 (1027)
.+...+| ++++..+.+++ .+.|||+||++..+ .. ..+...+...+|+|+++|+||||.|........
T Consensus 8 ~~~~~~~~~l~y~~~g~~~------~~~lvllHG~~~~~---~~---~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~ 75 (306)
T TIGR01249 8 YLNVSDNHQLYYEQSGNPD------GKPVVFLHGGPGSG---TD---PGCRRFFDPETYRIVLFDQRGCGKSTPHACLEE 75 (306)
T ss_pred eEEcCCCcEEEEEECcCCC------CCEEEEECCCCCCC---CC---HHHHhccCccCCEEEEECCCCCCCCCCCCCccc
Confidence 3455555 56665543222 35689999974321 11 233444555689999999999999985422111
Q ss_pred chHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 88 GETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
....|+...+..+....+..+++++||||||.+++.++.++|+ +++++|++++
T Consensus 76 ~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~--~v~~lvl~~~ 128 (306)
T TIGR01249 76 NTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPE--VVTGLVLRGI 128 (306)
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChH--hhhhheeecc
Confidence 1223333333333334445579999999999999999999998 6888888753
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.8e-12 Score=147.46 Aligned_cols=103 Identities=19% Similarity=0.161 Sum_probs=68.8
Q ss_pred ccEEEEECCCCCCCCCCChHHHH--HHHHHH-------HhCCcEEEEEcCCCCCCCCCCCCCc-----cchHHHH-HHHH
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQ--TLVRVM-------LSLGYISIRMNFRGVGASSGTYDSG-----NGETDDM-EILL 97 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~--~la~~L-------a~~Gy~Vla~DlrGhG~S~g~~~~~-----~~~~~Dv-~avl 97 (1027)
.|+|||+||++. +.. .|. .+.+.| ..++|+|+++|+||||.|+...... .....+. ..+.
T Consensus 69 gpplvllHG~~~---~~~--~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~ 143 (360)
T PRK06489 69 DNAVLVLHGTGG---SGK--SFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQY 143 (360)
T ss_pred CCeEEEeCCCCC---chh--hhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHH
Confidence 577999999843 221 232 454444 2458999999999999997432110 0112222 2333
Q ss_pred HHHHHhCCCCcEE-EEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 98 RYIQKKYPYLPII-LAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 98 ~~L~~~~~~~pvi-LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+.+....+..+++ |+||||||.+|+.++.++|+ +++++|++++
T Consensus 144 ~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~--~V~~LVLi~s 187 (360)
T PRK06489 144 RLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPD--FMDALMPMAS 187 (360)
T ss_pred HHHHHhcCCCceeEEEEECHHHHHHHHHHHhCch--hhheeeeecc
Confidence 4343444555664 89999999999999999999 7999998864
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.9e-12 Score=150.05 Aligned_cols=99 Identities=19% Similarity=0.215 Sum_probs=79.2
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC------CccchHHHHHHHHHHHHHhCCC
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD------SGNGETDDMEILLRYIQKKYPY 106 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~------~~~~~~~Dv~avl~~L~~~~~~ 106 (1027)
.|+|||+||++. +. ..|+.++..|++ +|+|+++|+||||.|+.... +...+++|+..+++.+. .
T Consensus 127 ~~~ivllHG~~~---~~--~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~----~ 196 (383)
T PLN03084 127 NPPVLLIHGFPS---QA--YSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK----S 196 (383)
T ss_pred CCeEEEECCCCC---CH--HHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC----C
Confidence 578999999853 22 358889999975 89999999999999986421 33456677776666653 3
Q ss_pred CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 107 LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 107 ~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
.+++|+|||+||.+++.++.++|+ +++++|+++|+
T Consensus 197 ~~~~LvG~s~GG~ia~~~a~~~P~--~v~~lILi~~~ 231 (383)
T PLN03084 197 DKVSLVVQGYFSPPVVKYASAHPD--KIKKLILLNPP 231 (383)
T ss_pred CCceEEEECHHHHHHHHHHHhChH--hhcEEEEECCC
Confidence 479999999999999999999998 79999999865
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.1e-12 Score=139.67 Aligned_cols=153 Identities=12% Similarity=0.086 Sum_probs=107.6
Q ss_pred EEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--------CCccchHH
Q psy15208 20 AINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--------DSGNGETD 91 (1027)
Q Consensus 20 ~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--------~~~~~~~~ 91 (1027)
++|.|++. .++.|+||++||+++....... -..+.+.+.+.||.|+++|++|++.+...+ ........
T Consensus 2 ~ly~P~~~--~~~~P~vv~lHG~~~~~~~~~~--~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~ 77 (212)
T TIGR01840 2 YVYVPAGL--TGPRALVLALHGCGQTASAYVI--DWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVE 77 (212)
T ss_pred EEEcCCCC--CCCCCEEEEeCCCCCCHHHHhh--hcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHH
Confidence 56778752 2468999999997543221110 013556666689999999999998654321 01124577
Q ss_pred HHHHHHHHHHHhCCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC----------------------
Q psy15208 92 DMEILLRYIQKKYPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---------------------- 147 (1027)
Q Consensus 92 Dv~avl~~L~~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---------------------- 147 (1027)
|+..+++++...++. .+++|+||||||.+++.++.++|+ .+++++.+++.....
T Consensus 78 ~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (212)
T TIGR01840 78 SLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPD--VFAGGASNAGLPYGEASSSISATPQMCTAATAASVCR 155 (212)
T ss_pred HHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCch--hheEEEeecCCcccccccchhhHhhcCCCCCHHHHHH
Confidence 888899998887654 379999999999999999999998 688888777553110
Q ss_pred -------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 148 -------LIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 148 -------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
.......|++++||.+|.+||++.+..+.+.
T Consensus 156 ~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~ 193 (212)
T TIGR01840 156 LVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDA 193 (212)
T ss_pred HHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHH
Confidence 0111234567999999999999998866654
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.43 E-value=2e-12 Score=147.11 Aligned_cols=103 Identities=18% Similarity=0.175 Sum_probs=72.7
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHH---HHHHhCCcEEEEEcCCCCCCCCCCCC-----Ccc-----chHHHHHHHHH
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLV---RVMLSLGYISIRMNFRGVGASSGTYD-----SGN-----GETDDMEILLR 98 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la---~~La~~Gy~Vla~DlrGhG~S~g~~~-----~~~-----~~~~Dv~avl~ 98 (1027)
..|+||++||+++ +.. .|..+. +.|...+|+|+++|+||||.|..... +.. ...+|+.+...
T Consensus 40 ~~~~vll~~~~~~---~~~--~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (339)
T PRK07581 40 KDNAILYPTWYSG---THQ--DNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHR 114 (339)
T ss_pred CCCEEEEeCCCCC---Ccc--cchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHH
Confidence 3467777787643 211 122222 36766789999999999999974321 111 25677777555
Q ss_pred HHHHhCCCCc-EEEEEechhHHHHHHHHHhcCCcCCccEEEEEc
Q psy15208 99 YIQKKYPYLP-IILAGFSFGTFVQAKLQKRLDKEISIKILILIS 141 (1027)
Q Consensus 99 ~L~~~~~~~p-viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~ 141 (1027)
.+....+..+ ++|+||||||.+|+.+|.++|+ +++++|+++
T Consensus 115 ~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~--~V~~Lvli~ 156 (339)
T PRK07581 115 LLTEKFGIERLALVVGWSMGAQQTYHWAVRYPD--MVERAAPIA 156 (339)
T ss_pred HHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHH--HHhhheeee
Confidence 5555456667 5799999999999999999999 799999884
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.41 E-value=3e-12 Score=157.21 Aligned_cols=171 Identities=18% Similarity=0.249 Sum_probs=129.2
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
+.+.+.+++.+| +++++++.|.+....+..|+||++||+++..-. ..+....+.|+.+||.|+.+++||.+.-...
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~---~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~ 440 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVG---YSFNPEIQVLASAGYAVLAPNYRGSTGYGRE 440 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccc---cccchhhHHHhcCCeEEEEeCCCCCCccHHH
Confidence 567789999999 999999999874333346999999998642211 2466788899999999999999987664321
Q ss_pred C------CCccchHHHHHHHHHHHHHhCCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC---------
Q psy15208 83 Y------DSGNGETDDMEILLRYIQKKYPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK--------- 145 (1027)
Q Consensus 83 ~------~~~~~~~~Dv~avl~~L~~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~--------- 145 (1027)
+ .......+|+.+.++++.+..-. .+++++|||+||.++++++.+.|. +++.+...+...
T Consensus 441 F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~---f~a~~~~~~~~~~~~~~~~~~ 517 (620)
T COG1506 441 FADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPR---FKAAVAVAGGVDWLLYFGEST 517 (620)
T ss_pred HHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCch---hheEEeccCcchhhhhccccc
Confidence 1 12345789999999977654323 369999999999999999999874 666665554321
Q ss_pred -------------cC-------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 146 -------------KW-------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 146 -------------~~-------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
.+ ...++++|+|+|||++|..||.+++..+.+.++
T Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~ 578 (620)
T COG1506 518 EGLRFDPEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALK 578 (620)
T ss_pred hhhcCCHHHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHH
Confidence 00 145788999999999999999999988776543
|
|
| >KOG1454|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.5e-12 Score=142.06 Aligned_cols=104 Identities=21% Similarity=0.218 Sum_probs=74.7
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL-GYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~-Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
.++.||++|||+. +.. .|+.....|.+. |+.|+++|++|||.|+.......-.+.+....+..+-..+...+++
T Consensus 57 ~~~pvlllHGF~~---~~~--~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~ 131 (326)
T KOG1454|consen 57 DKPPVLLLHGFGA---SSF--SWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVS 131 (326)
T ss_pred CCCcEEEeccccC---Ccc--cHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceE
Confidence 5788999999854 222 477777777665 5999999999999655432222122334334444444444555799
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEE---EEcc
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILI---LISV 142 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLV---li~p 142 (1027)
++||||||.+|+.+|+.+|+ .+++++ ++++
T Consensus 132 lvghS~Gg~va~~~Aa~~P~--~V~~lv~~~~~~~ 164 (326)
T KOG1454|consen 132 LVGHSLGGIVALKAAAYYPE--TVDSLVLLDLLGP 164 (326)
T ss_pred EEEeCcHHHHHHHHHHhCcc--cccceeeeccccc
Confidence 99999999999999999999 799999 6665
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.7e-12 Score=133.05 Aligned_cols=126 Identities=13% Similarity=0.132 Sum_probs=89.2
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhC--CcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL--GYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~--Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
|.|||+||++ ++........+.+.|.++ +|+|+++|+|||+. ...+++ +.+....+..++++
T Consensus 2 p~illlHGf~---ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~~---------~~~~~l----~~l~~~~~~~~~~l 65 (190)
T PRK11071 2 STLLYLHGFN---SSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYPA---------DAAELL----ESLVLEHGGDPLGL 65 (190)
T ss_pred CeEEEECCCC---CCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCHH---------HHHHHH----HHHHHHcCCCCeEE
Confidence 5689999984 344332222456666553 79999999999841 233333 33434445568999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-------------------C-------------CCCC--CCCcEE
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-------------------W-------------LIPE--VPKNTI 157 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-------------------~-------------~l~~--i~~PvL 157 (1027)
+||||||.+++.+|.++|. .+|+++|+..+ + .... .+.|++
T Consensus 66 vG~S~Gg~~a~~~a~~~~~-----~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~v~ 140 (190)
T PRK11071 66 VGSSLGGYYATWLSQCFML-----PAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDPLESPDLIW 140 (190)
T ss_pred EEECHHHHHHHHHHHHcCC-----CEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCccCCChhhEE
Confidence 9999999999999999874 25778776442 1 0122 457788
Q ss_pred EEEeCCCCCCChHHHHhhhCCCC
Q psy15208 158 IIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 158 iIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
++||++|+++|++.+.++++...
T Consensus 141 iihg~~De~V~~~~a~~~~~~~~ 163 (190)
T PRK11071 141 LLQQTGDEVLDYRQAVAYYAACR 163 (190)
T ss_pred EEEeCCCCcCCHHHHHHHHHhcc
Confidence 99999999999999998888654
|
|
| >KOG4178|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=8.1e-12 Score=138.05 Aligned_cols=100 Identities=22% Similarity=0.257 Sum_probs=84.9
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC----CccchHHHHHHHHHHHHHhCCCC
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD----SGNGETDDMEILLRYIQKKYPYL 107 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~----~~~~~~~Dv~avl~~L~~~~~~~ 107 (1027)
..|+|+++||++.. +. .|+.....|+++||+|+++|+||+|.|+.... +...++.|+..+++.+. .+
T Consensus 43 ~gP~illlHGfPe~---wy--swr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg----~~ 113 (322)
T KOG4178|consen 43 DGPIVLLLHGFPES---WY--SWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLG----LK 113 (322)
T ss_pred CCCEEEEEccCCcc---ch--hhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhc----cc
Confidence 47999999999753 22 48889999999999999999999999986542 33567888888888876 34
Q ss_pred cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 108 PIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 108 pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+++++||++|+.+|+.++..+|+ +++++|+++.
T Consensus 114 k~~lvgHDwGaivaw~la~~~Pe--rv~~lv~~nv 146 (322)
T KOG4178|consen 114 KAFLVGHDWGAIVAWRLALFYPE--RVDGLVTLNV 146 (322)
T ss_pred eeEEEeccchhHHHHHHHHhChh--hcceEEEecC
Confidence 89999999999999999999999 8999998874
|
|
| >KOG4667|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.1e-12 Score=130.19 Aligned_cols=172 Identities=20% Similarity=0.295 Sum_probs=125.7
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
...+.++...+ .+...+..- +...+||++||+ .++..+.....+|..|.+.||.++.+|++|.|.|++.+
T Consensus 10 ~~~ivi~n~~ne~lvg~lh~t------gs~e~vvlcHGf---rS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf 80 (269)
T KOG4667|consen 10 AQKIVIPNSRNEKLVGLLHET------GSTEIVVLCHGF---RSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSF 80 (269)
T ss_pred eeEEEeccCCCchhhcceecc------CCceEEEEeecc---ccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcc
Confidence 34455555544 333333222 345789999997 44555556778999999999999999999999999854
Q ss_pred --CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC----------------
Q psy15208 84 --DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK---------------- 145 (1027)
Q Consensus 84 --~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~---------------- 145 (1027)
..+..+++|+..+++++....... -+++|||-||.+++.++.++++ ++-+|..++...
T Consensus 81 ~~Gn~~~eadDL~sV~q~~s~~nr~v-~vi~gHSkGg~Vvl~ya~K~~d---~~~viNcsGRydl~~~I~eRlg~~~l~~ 156 (269)
T KOG4667|consen 81 YYGNYNTEADDLHSVIQYFSNSNRVV-PVILGHSKGGDVVLLYASKYHD---IRNVINCSGRYDLKNGINERLGEDYLER 156 (269)
T ss_pred ccCcccchHHHHHHHHHHhccCceEE-EEEEeecCccHHHHHHHHhhcC---chheEEcccccchhcchhhhhcccHHHH
Confidence 456678999999999998743222 4678999999999999999987 566666554210
Q ss_pred ------------------cC-----------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceEeeccc
Q psy15208 146 ------------------KW-----------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVVVIPES 189 (1027)
Q Consensus 146 ------------------~~-----------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L~t~Es 189 (1027)
.| +--...||+|-+||..|.+||.+++..+++.+....+...|.
T Consensus 157 ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEg 235 (269)
T KOG4667|consen 157 IKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEG 235 (269)
T ss_pred HHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccCCceEEecC
Confidence 00 011346999999999999999999999998776555544444
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.5e-12 Score=146.79 Aligned_cols=84 Identities=18% Similarity=0.300 Sum_probs=63.2
Q ss_pred HHHHHHH---HHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCc-EEEEEechhHHHHHHHHHhc
Q psy15208 53 VVQTLVR---VMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLP-IILAGFSFGTFVQAKLQKRL 128 (1027)
Q Consensus 53 ~~~~la~---~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~p-viLVGhSmGG~vAl~~A~~~ 128 (1027)
+|..+.. .|...+|+|+++|+||||.|.....+....++|+.++++.+ +..+ ++|+||||||.+++.+|.++
T Consensus 84 ~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~~~~~~~~a~dl~~ll~~l----~l~~~~~lvG~SmGG~vA~~~A~~~ 159 (343)
T PRK08775 84 WWEGLVGSGRALDPARFRLLAFDFIGADGSLDVPIDTADQADAIALLLDAL----GIARLHAFVGYSYGALVGLQFASRH 159 (343)
T ss_pred cchhccCCCCccCccccEEEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHc----CCCcceEEEEECHHHHHHHHHHHHC
Confidence 4556664 46445899999999999988643223345666666666654 3324 57999999999999999999
Q ss_pred CCcCCccEEEEEcc
Q psy15208 129 DKEISIKILILISV 142 (1027)
Q Consensus 129 p~~~~V~gLVli~p 142 (1027)
|+ +++++|++++
T Consensus 160 P~--~V~~LvLi~s 171 (343)
T PRK08775 160 PA--RVRTLVVVSG 171 (343)
T ss_pred hH--hhheEEEECc
Confidence 99 7999998874
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.3e-11 Score=140.86 Aligned_cols=102 Identities=21% Similarity=0.231 Sum_probs=72.0
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccc--hHH-H-HHHHHHHHHHhCCCC
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNG--ETD-D-MEILLRYIQKKYPYL 107 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~--~~~-D-v~avl~~L~~~~~~~ 107 (1027)
.+|+|||+||++. +. ..|...+..|++ +|+|+++|+||||.|+........ ... . +..+.+++.. .+..
T Consensus 104 ~~p~vvllHG~~~---~~--~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~-l~~~ 176 (402)
T PLN02894 104 DAPTLVMVHGYGA---SQ--GFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKA-KNLS 176 (402)
T ss_pred CCCEEEEECCCCc---ch--hHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH-cCCC
Confidence 4688999999743 22 246667788876 699999999999999753211111 111 1 1223333332 3445
Q ss_pred cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 108 PIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 108 pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+++|+||||||.+++.++.++|+ +++++|+++|
T Consensus 177 ~~~lvGhS~GG~la~~~a~~~p~--~v~~lvl~~p 209 (402)
T PLN02894 177 NFILLGHSFGGYVAAKYALKHPE--HVQHLILVGP 209 (402)
T ss_pred CeEEEEECHHHHHHHHHHHhCch--hhcEEEEECC
Confidence 89999999999999999999998 7899998875
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.37 E-value=2e-12 Score=148.03 Aligned_cols=119 Identities=13% Similarity=0.158 Sum_probs=78.2
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCC---C---hHHHHHHH---HHHHhCCcEEEEEcCCC--CCCCCCC--
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTM---D---NKVVQTLV---RVMLSLGYISIRMNFRG--VGASSGT-- 82 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~---~---~~~~~~la---~~La~~Gy~Vla~DlrG--hG~S~g~-- 82 (1027)
++++..|.+.+ ....++|||+||++.+.-.. . ..+|..++ ..|...+|+|+++|+|| ||.|...
T Consensus 17 ~~~y~~~g~~~---~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~ 93 (351)
T TIGR01392 17 RVAYETYGTLN---AERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI 93 (351)
T ss_pred eEEEEeccccC---CCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC
Confidence 67777776532 12357899999985421100 0 00355554 35656799999999999 5555421
Q ss_pred ------C------CCccchHHHHHHHHHHHHHhCCCCc-EEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 83 ------Y------DSGNGETDDMEILLRYIQKKYPYLP-IILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 83 ------~------~~~~~~~~Dv~avl~~L~~~~~~~p-viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+ .+...+++|+.++++. .+..+ ++|+||||||.+++.++.++|+ +++++|++++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~l~G~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 161 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQKLLLDH----LGIEQIAAVVGGSMGGMQALEWAIDYPE--RVRAIVVLATS 161 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHHHHHHHH----cCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEccC
Confidence 0 1123344555444443 34456 9999999999999999999998 78999988753
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.3e-11 Score=147.37 Aligned_cols=106 Identities=16% Similarity=0.169 Sum_probs=76.7
Q ss_pred EEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---
Q psy15208 7 FFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--- 83 (1027)
Q Consensus 7 ~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--- 83 (1027)
.+.+...+.+++++.+.+. ..|+|||+||++ ++. ..|..+.+.| ..||+|+++|+||||.|....
T Consensus 5 ~~~~~~~g~~l~~~~~g~~------~~~~ivllHG~~---~~~--~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~ 72 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDP------DRPTVVLVHGYP---DNH--EVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTA 72 (582)
T ss_pred EEEEeeCCEEEEEEEcCCC------CCCeEEEEcCCC---chH--HHHHHHHHHh-hcceEEEEecCCCCCCCCCCCccc
Confidence 3444444447877665432 257899999984 222 3588899999 568999999999999997532
Q ss_pred -CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHh
Q psy15208 84 -DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKR 127 (1027)
Q Consensus 84 -~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~ 127 (1027)
.+...+++|+..+++.+. ...|++|+||||||.+++.++.+
T Consensus 73 ~~~~~~~a~dl~~~i~~l~---~~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 73 AYTLARLADDFAAVIDAVS---PDRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred ccCHHHHHHHHHHHHHHhC---CCCcEEEEecChHHHHHHHHHhC
Confidence 134567778777777653 23469999999999999888766
|
|
| >COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.6e-12 Score=146.76 Aligned_cols=104 Identities=21% Similarity=0.273 Sum_probs=89.3
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccC
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
.+..+.|||++|+|+|.||+.+|+++++|||+|+.+++.+. .......+++..+++++++++|+|+.+++ +.++|
T Consensus 140 ~~~~l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~T~hLi 218 (324)
T COG1052 140 LGFDLRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN-PEAEKELGARYVDLDELLAESDIISLHCPLTPETRHLI 218 (324)
T ss_pred cccCCCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC-hHHHhhcCceeccHHHHHHhCCEEEEeCCCChHHhhhc
Confidence 35578999999999999999999999999999999998886 44445566888889999999999987554 56999
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+++.|++||+|++|||+|... -+|.+++.
T Consensus 219 n~~~l~~mk~ga~lVNtaRG~-~VDe~ALi 247 (324)
T COG1052 219 NAEELAKMKPGAILVNTARGG-LVDEQALI 247 (324)
T ss_pred CHHHHHhCCCCeEEEECCCcc-ccCHHHHH
Confidence 999999999999999999985 36666555
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.9e-12 Score=142.74 Aligned_cols=123 Identities=15% Similarity=0.040 Sum_probs=90.7
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchH-HHHH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGET-DDME 94 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~-~Dv~ 94 (1027)
.+..+.|.|... ...+++||++||+..++-.++...++.++++|+++||+|+++|++|+|.|.... +..... .|+.
T Consensus 47 ~~~l~~~~~~~~--~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~-~~~d~~~~~~~ 123 (350)
T TIGR01836 47 KVVLYRYTPVKD--NTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL-TLDDYINGYID 123 (350)
T ss_pred cEEEEEecCCCC--cCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC-CHHHHHHHHHH
Confidence 445555666531 123445899999632211111123468999999999999999999999887543 333444 4588
Q ss_pred HHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 95 ILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 95 avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
++++++....+..+++++||||||.+++.++..+|+ +++++|+++++
T Consensus 124 ~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~--~v~~lv~~~~p 170 (350)
T TIGR01836 124 KCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPD--KIKNLVTMVTP 170 (350)
T ss_pred HHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCch--heeeEEEeccc
Confidence 889999888887899999999999999999999988 68999988864
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.8e-11 Score=140.32 Aligned_cols=166 Identities=18% Similarity=0.258 Sum_probs=114.5
Q ss_pred CceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 3 SNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 3 m~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
...+++.|+-++++|.++++.|++ .++.|+||++-|. .+...+ .++.+.++|+.+|+.++++|.||.|.|...
T Consensus 163 ~~i~~v~iP~eg~~I~g~LhlP~~---~~p~P~VIv~gGl---Ds~qeD-~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~ 235 (411)
T PF06500_consen 163 YPIEEVEIPFEGKTIPGYLHLPSG---EKPYPTVIVCGGL---DSLQED-LYRLFRDYLAPRGIAMLTVDMPGQGESPKW 235 (411)
T ss_dssp SEEEEEEEEETTCEEEEEEEESSS---SS-EEEEEEE--T---TS-GGG-GHHHHHCCCHHCT-EEEEE--TTSGGGTTT
T ss_pred CCcEEEEEeeCCcEEEEEEEcCCC---CCCCCEEEEeCCc---chhHHH-HHHHHHHHHHhCCCEEEEEccCCCcccccC
Confidence 345678888888899999999986 4688998888885 333333 455666789999999999999999998743
Q ss_pred CCCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-------------
Q psy15208 83 YDSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------------- 147 (1027)
Q Consensus 83 ~~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------------- 147 (1027)
.-+.+. -.-..++++++.... +..+|.++|.||||.+|.++|..+++ +++++|..++.+..+
T Consensus 236 ~l~~D~-~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~--RlkavV~~Ga~vh~~ft~~~~~~~~P~m 312 (411)
T PF06500_consen 236 PLTQDS-SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP--RLKAVVALGAPVHHFFTDPEWQQRVPDM 312 (411)
T ss_dssp -S-S-C-CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT--T-SEEEEES---SCGGH-HHHHTTS-HH
T ss_pred CCCcCH-HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc--ceeeEeeeCchHhhhhccHHHHhcCCHH
Confidence 212111 122457888887753 23479999999999999999988877 799999999874422
Q ss_pred --------------------------------CC--CCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 148 --------------------------------LI--PEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 148 --------------------------------~l--~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
++ .++++|+|.+.|++|.++|.++.+.++..
T Consensus 313 y~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~ 377 (411)
T PF06500_consen 313 YLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAES 377 (411)
T ss_dssp HHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHT
T ss_pred HHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhc
Confidence 13 56789999999999999999998866554
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.2e-12 Score=144.80 Aligned_cols=111 Identities=15% Similarity=0.134 Sum_probs=89.4
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHH-hCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMR-ALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~-~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.||+|+|+|+|.||+.+|++++ +|||+|+++++.+. .......|.+..++++++++||+|+.+++ +++++
T Consensus 140 g~~L~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~-~~~~~~~~~~~~~l~ell~~sDvv~lh~plt~~T~~li 218 (323)
T PRK15409 140 GTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHH-KEAEERFNARYCDLDTLLQESDFVCIILPLTDETHHLF 218 (323)
T ss_pred cCCCCCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCc-hhhHHhcCcEecCHHHHHHhCCEEEEeCCCChHHhhcc
Confidence 45799999999999999999999998 99999999976542 22234557777899999999999997653 66899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh-ccceeccc
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK-KYKWENIK 917 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~-~~~~~~~~ 917 (1027)
+++.|++||+|++|||+|.... +|.++|. .++...+.
T Consensus 219 ~~~~l~~mk~ga~lIN~aRG~v-Vde~AL~~AL~~g~i~ 256 (323)
T PRK15409 219 GAEQFAKMKSSAIFINAGRGPV-VDENALIAALQKGEIH 256 (323)
T ss_pred CHHHHhcCCCCeEEEECCCccc-cCHHHHHHHHHcCCee
Confidence 9999999999999999999853 5666665 33333443
|
|
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.7e-12 Score=142.88 Aligned_cols=99 Identities=27% Similarity=0.297 Sum_probs=84.7
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCcH
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVITH 881 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~~ 881 (1027)
..+.||||+|+|+|.||+.+|+++++|||+|+++|+.+.. ...++...++++++++||+|+.+++ ++++|++
T Consensus 141 ~~L~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~----~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~ 216 (311)
T PRK08410 141 GEIKGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKN----KNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAY 216 (311)
T ss_pred cccCCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCccc----cccCceeecHHHHhhcCCEEEEeCCCCchhhcccCH
Confidence 4689999999999999999999999999999999875421 1346777899999999999997654 6799999
Q ss_pred HHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 882 DHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.|++||+|++|||+|... -+|.++|.
T Consensus 217 ~~~~~Mk~~a~lIN~aRG~-vVDe~AL~ 243 (311)
T PRK08410 217 KELKLLKDGAILINVGRGG-IVNEKDLA 243 (311)
T ss_pred HHHHhCCCCeEEEECCCcc-ccCHHHHH
Confidence 9999999999999999984 35666665
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.9e-11 Score=131.05 Aligned_cols=128 Identities=20% Similarity=0.395 Sum_probs=94.3
Q ss_pred EEEEecCCceEEEEEEe--cCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC
Q psy15208 7 FFNINGSVGILHCAINF--PSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD 84 (1027)
Q Consensus 7 ~i~I~t~dG~I~~~l~~--P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~ 84 (1027)
+..+.+++|.....-|. |.. +..|.||++||. .|+..+.+.+.+++.+.++||.|+++++||++.+....+
T Consensus 51 re~v~~pdg~~~~ldw~~~p~~----~~~P~vVl~HGL---~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p 123 (345)
T COG0429 51 RERLETPDGGFIDLDWSEDPRA----AKKPLVVLFHGL---EGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP 123 (345)
T ss_pred eEEEEcCCCCEEEEeeccCccc----cCCceEEEEecc---CCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc
Confidence 34677888844333333 333 456899999998 455566688999999999999999999999999875322
Q ss_pred C--ccchHHHHHHHHHHHHHhCCCCcEEEEEechhH-HHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 85 S--GNGETDDMEILLRYIQKKYPYLPIILAGFSFGT-FVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 85 ~--~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG-~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
. -.+...|+..++++++..++..|+..+|.|+|| +++..++.. .+...+.+.+.++.
T Consensus 124 ~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgee-g~d~~~~aa~~vs~ 183 (345)
T COG0429 124 RLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEE-GDDLPLDAAVAVSA 183 (345)
T ss_pred ceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhh-ccCcccceeeeeeC
Confidence 2 235679999999999998888999999999999 455555544 44334555555553
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.5e-11 Score=142.65 Aligned_cols=119 Identities=15% Similarity=0.058 Sum_probs=75.7
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCCh--------HHHHHHH---HHHHhCCcEEEEEcCCCC-CCCCCCC
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDN--------KVVQTLV---RVMLSLGYISIRMNFRGV-GASSGTY 83 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~--------~~~~~la---~~La~~Gy~Vla~DlrGh-G~S~g~~ 83 (1027)
++++..+...+ ....|+|||+||++.+...+.. .+|..++ ..|...+|+|+++|++|+ |.|.+..
T Consensus 34 ~~~y~~~G~~~---~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 34 ELAYETYGTLN---ADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred eEEEEeccccC---CCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 45555554321 1235889999998543211100 0255554 234356899999999984 4443210
Q ss_pred ----------------CCccchHHHHHHHHHHHHHhCCCCc-EEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 84 ----------------DSGNGETDDMEILLRYIQKKYPYLP-IILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 84 ----------------~~~~~~~~Dv~avl~~L~~~~~~~p-viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
.+...++.|+.++++.+ +..+ ++|+||||||.+++.+|.++|+ +++++|++++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 181 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDAL----GITRLAAVVGGSMGGMQALEWAIDYPD--RVRSALVIASS 181 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh----CCCCceEEEEECHHHHHHHHHHHhChH--hhhEEEEECCC
Confidence 12334555555555544 4446 5899999999999999999998 78999988753
|
|
| >PRK06487 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=7.1e-12 Score=141.76 Aligned_cols=106 Identities=17% Similarity=0.174 Sum_probs=85.1
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCcH
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVITH 881 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~~ 881 (1027)
..+.||+|+|+|+|.||+.+|+++++|||+|+++++.+. . ..++..++++++++||+|+.+++ |+++|++
T Consensus 144 ~~l~gktvgIiG~G~IG~~vA~~l~~fgm~V~~~~~~~~-~-----~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~ 217 (317)
T PRK06487 144 VELEGKTLGLLGHGELGGAVARLAEAFGMRVLIGQLPGR-P-----ARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGA 217 (317)
T ss_pred cccCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCC-c-----ccccccCHHHHHHhCCEEEECCCCChHHhcCcCH
Confidence 468999999999999999999999999999999986531 1 12345689999999999997653 6799999
Q ss_pred HHHhcCCCCeEEEEecCCCcccchhhhh-ccceecccc
Q psy15208 882 DHMRDMKDQAIVCNIGHFDNEIEVEKLK-KYKWENIKP 918 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d~eid~~~l~-~~~~~~~~~ 918 (1027)
+.|++||+|++|||+|.... +|.++|. .+....+..
T Consensus 218 ~~~~~mk~ga~lIN~aRG~v-Vde~AL~~AL~~g~i~g 254 (317)
T PRK06487 218 RELALMKPGALLINTARGGL-VDEQALADALRSGHLGG 254 (317)
T ss_pred HHHhcCCCCeEEEECCCccc-cCHHHHHHHHHcCCeeE
Confidence 99999999999999999853 5666564 333334433
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.6e-11 Score=140.57 Aligned_cols=104 Identities=18% Similarity=0.241 Sum_probs=83.9
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH------------hhcCcEEcCHHHHhccCCEEEec
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA------------AMEGFLVVTMEYAKKYGDIFVTC 872 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A------------~~~G~~v~~~~e~l~~aDvvi~a 872 (1027)
+..+.||+|+|+|+|.||+.+|++|++|||+|+++|++..+.... ...+....+++++++++|+|+.+
T Consensus 154 ~~~l~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 154 GDTLFGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 456899999999999999999999999999999998764222111 01122556899999999999987
Q ss_pred CC----CcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 873 TG----NYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 873 tG----~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++ +.++|+++.|+.||+|++|||+|... -+|.++|.
T Consensus 234 lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~-lVde~AL~ 273 (347)
T PLN02928 234 CTLTKETAGIVNDEFLSSMKKGALLVNIARGG-LLDYDAVL 273 (347)
T ss_pred CCCChHhhcccCHHHHhcCCCCeEEEECCCcc-ccCHHHHH
Confidence 64 67899999999999999999999984 35666664
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.6e-10 Score=125.17 Aligned_cols=141 Identities=15% Similarity=0.109 Sum_probs=93.5
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC---C-C-C----CCccc-------hHHHHH
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS---G-T-Y----DSGNG-------ETDDME 94 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~---g-~-~----~~~~~-------~~~Dv~ 94 (1027)
+++|+|||+||++ ++.. .|..+++.|.+.++.+..++.+|...+. + . + .+... ....+.
T Consensus 14 ~~~~~vIlLHG~G---~~~~--~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~ 88 (232)
T PRK11460 14 PAQQLLLLFHGVG---DNPV--AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFI 88 (232)
T ss_pred CCCcEEEEEeCCC---CChH--HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHH
Confidence 4678999999974 3433 4778999998777666666666653221 0 0 0 01111 122233
Q ss_pred HHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-CCCCCCCcEEEEEeCCCCCCChHH
Q psy15208 95 ILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW-LIPEVPKNTIIIHGELDEIIPLKD 171 (1027)
Q Consensus 95 avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~-~l~~i~~PvLiIhG~~D~iVP~~~ 171 (1027)
+.++++..++. ..+++|+||||||.+++.++.++|+ .+.+++.+++..... .......|++++||++|+++|++.
T Consensus 89 ~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~--~~~~vv~~sg~~~~~~~~~~~~~pvli~hG~~D~vvp~~~ 166 (232)
T PRK11460 89 ETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPG--LAGRVIAFSGRYASLPETAPTATTIHLIHGGEDPVIDVAH 166 (232)
T ss_pred HHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCC--cceEEEEeccccccccccccCCCcEEEEecCCCCccCHHH
Confidence 34444444433 3479999999999999999998887 567788777654322 123457899999999999999999
Q ss_pred HHhhhCC
Q psy15208 172 VFLWANP 178 (1027)
Q Consensus 172 ~~~l~~~ 178 (1027)
+..+.+.
T Consensus 167 ~~~~~~~ 173 (232)
T PRK11460 167 AVAAQEA 173 (232)
T ss_pred HHHHHHH
Confidence 8766553
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.2e-11 Score=137.32 Aligned_cols=125 Identities=20% Similarity=0.117 Sum_probs=84.8
Q ss_pred ceEEEEEecCCceEEEEEEecCCcc--ccCCccEEEEECCCCCCCCCCC-hHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q psy15208 4 NTKFFNINGSVGILHCAINFPSSIK--LLKLKGVVLIAHPHPLFGGTMD-NKVVQTLVRVMLSLGYISIRMNFRGVGASS 80 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~P~~~~--~~~~~pvVVllHG~~~~gGs~~-~~~~~~la~~La~~Gy~Vla~DlrGhG~S~ 80 (1027)
+.+++.+.++||.+-...+.|.... ....+|+|+|+||+...+..+. +..-+.++..|+++||+|+++|+||++.|.
T Consensus 43 ~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~ 122 (395)
T PLN02872 43 SCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSY 122 (395)
T ss_pred CceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccccccc
Confidence 4567889999996555555553210 1134688999999854333321 111245777899999999999999998764
Q ss_pred CCC-----------CCccchH-HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCC
Q psy15208 81 GTY-----------DSGNGET-DDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDK 130 (1027)
Q Consensus 81 g~~-----------~~~~~~~-~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~ 130 (1027)
+.. .++...+ .|+.++++++....+ .+++++||||||.+++.++ .+|+
T Consensus 123 gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~-~~p~ 182 (395)
T PLN02872 123 GHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAAL-TQPN 182 (395)
T ss_pred CCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHh-hChH
Confidence 311 1233444 799999999976433 5899999999999998544 4454
|
|
| >PRK06932 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.7e-11 Score=136.87 Aligned_cols=98 Identities=19% Similarity=0.169 Sum_probs=81.3
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCcH
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVITH 881 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~~ 881 (1027)
..+.||+|+|+|+|.||+.+|+++++|||+|++++..+... ......++++++++||+|+.+++ |.++|++
T Consensus 143 ~~l~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~~~~~-----~~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~ 217 (314)
T PRK06932 143 TDVRGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHKGASV-----CREGYTPFEEVLKQADIVTLHCPLTETTQNLINA 217 (314)
T ss_pred cccCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCcccc-----cccccCCHHHHHHhCCEEEEcCCCChHHhcccCH
Confidence 36899999999999999999999999999999997643211 11224689999999999998654 6799999
Q ss_pred HHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 882 DHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.|++||+|++|||+|... -+|.++|.
T Consensus 218 ~~l~~mk~ga~lIN~aRG~-~Vde~AL~ 244 (314)
T PRK06932 218 ETLALMKPTAFLINTGRGP-LVDEQALL 244 (314)
T ss_pred HHHHhCCCCeEEEECCCcc-ccCHHHHH
Confidence 9999999999999999984 35666665
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.3e-10 Score=126.34 Aligned_cols=136 Identities=18% Similarity=0.186 Sum_probs=99.9
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEI 95 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~a 95 (1027)
.+.+.++.|.. .+..|+|||+||++.. +..|..++++|+++||.|+++|++|++.+.. .....|..+
T Consensus 38 ~~p~~v~~P~~---~g~~PvVv~lHG~~~~-----~~~y~~l~~~Las~G~~VvapD~~g~~~~~~-----~~~i~d~~~ 104 (313)
T PLN00021 38 PKPLLVATPSE---AGTYPVLLFLHGYLLY-----NSFYSQLLQHIASHGFIVVAPQLYTLAGPDG-----TDEIKDAAA 104 (313)
T ss_pred CceEEEEeCCC---CCCCCEEEEECCCCCC-----cccHHHHHHHHHhCCCEEEEecCCCcCCCCc-----hhhHHHHHH
Confidence 46777888865 3567999999998532 2357889999999999999999998653321 123566777
Q ss_pred HHHHHHHhC----------CCCcEEEEEechhHHHHHHHHHhcCCc---CCccEEEEEccCCCcC--------------C
Q psy15208 96 LLRYIQKKY----------PYLPIILAGFSFGTFVQAKLQKRLDKE---ISIKILILISVAVKKW--------------L 148 (1027)
Q Consensus 96 vl~~L~~~~----------~~~pviLVGhSmGG~vAl~~A~~~p~~---~~V~gLVli~p~~~~~--------------~ 148 (1027)
+++|+.... +..+++++||||||.+++.+|..+++. .+++++|.++|..... .
T Consensus 105 ~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~~p~il~~~~~ 184 (313)
T PLN00021 105 VINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQTPPPVLTYAPH 184 (313)
T ss_pred HHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCCCCcccccCcc
Confidence 777776521 224699999999999999999998752 2589999998853211 1
Q ss_pred CCCCCCcEEEEEeCCC
Q psy15208 149 IPEVPKNTIIIHGELD 164 (1027)
Q Consensus 149 l~~i~~PvLiIhG~~D 164 (1027)
...+..|++++++..|
T Consensus 185 s~~~~~P~liig~g~~ 200 (313)
T PLN00021 185 SFNLDIPVLVIGTGLG 200 (313)
T ss_pred cccCCCCeEEEecCCC
Confidence 2236699999999876
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.6e-11 Score=139.73 Aligned_cols=114 Identities=12% Similarity=0.132 Sum_probs=91.5
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.||+|+|+|+|.||+.+|+++++||++|+++|+++.........|+.. .+++++++++|+|+.+++ +.+++
T Consensus 194 ~~~L~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt~~T~~li 273 (386)
T PLN03139 194 AYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMF 273 (386)
T ss_pred CcCCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCCHHHHHHh
Confidence 4579999999999999999999999999999999988764444445567664 489999999999998765 56899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh-ccceeccccc
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK-KYKWENIKPQ 919 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~-~~~~~~~~~~ 919 (1027)
+++.|+.||+|+++||+|... -+|.+.|. .++...+...
T Consensus 274 ~~~~l~~mk~ga~lIN~aRG~-iVDe~AL~~AL~sG~l~GA 313 (386)
T PLN03139 274 NKERIAKMKKGVLIVNNARGA-IMDTQAVADACSSGHIGGY 313 (386)
T ss_pred CHHHHhhCCCCeEEEECCCCc-hhhHHHHHHHHHcCCceEE
Confidence 999999999999999999984 35666564 3344444433
|
|
| >PLN02306 hydroxypyruvate reductase | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.7e-11 Score=139.95 Aligned_cols=104 Identities=20% Similarity=0.320 Sum_probs=82.2
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHH-hCCCEEEEEcCCchhHHHH--hhcC------------cE-EcCHHHHhccCCE
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMR-ALSAQVWIIEIDPICALQA--AMEG------------FL-VVTMEYAKKYGDI 868 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~-~~Ga~ViV~d~dp~r~~~A--~~~G------------~~-v~~~~e~l~~aDv 868 (1027)
+..+.||+|+|+|+|.||+.+|++++ +|||+|+++|+.+...... ...| +. ..++++++++||+
T Consensus 160 g~~L~gktvGIiG~G~IG~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDi 239 (386)
T PLN02306 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADV 239 (386)
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCE
Confidence 45689999999999999999999985 9999999998775322111 1111 12 3489999999999
Q ss_pred EEecC----CCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 869 FVTCT----GNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 869 vi~at----G~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
|+.++ .+.++|+.+.|++||+|++|||+|.... +|.++|.
T Consensus 240 V~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~l-VDe~AL~ 283 (386)
T PLN02306 240 ISLHPVLDKTTYHLINKERLALMKKEAVLVNASRGPV-IDEVALV 283 (386)
T ss_pred EEEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccc-cCHHHHH
Confidence 99854 3678999999999999999999999743 5655554
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.7e-11 Score=139.77 Aligned_cols=112 Identities=12% Similarity=0.175 Sum_probs=89.7
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.|++|+|+|+|.||+.+|++|++||++|+++|+.+.........|+. ..+++++++++|+|+.+++ +.+++
T Consensus 187 ~~~L~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li 266 (385)
T PRK07574 187 SYDLEGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHPETEHLF 266 (385)
T ss_pred ceecCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCHHHHHHh
Confidence 456899999999999999999999999999999999876433334455665 4689999999999998765 56899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh-ccceeccc
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK-KYKWENIK 917 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~-~~~~~~~~ 917 (1027)
+++.|+.||+|++|||+|.... +|.+.|. .++...+.
T Consensus 267 ~~~~l~~mk~ga~lIN~aRG~i-VDe~AL~~AL~sG~i~ 304 (385)
T PRK07574 267 DADVLSRMKRGSYLVNTARGKI-VDRDAVVRALESGHLA 304 (385)
T ss_pred CHHHHhcCCCCcEEEECCCCch-hhHHHHHHHHHhCCcc
Confidence 9999999999999999999843 4555554 33333343
|
|
| >KOG1838|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.7e-10 Score=127.31 Aligned_cols=133 Identities=23% Similarity=0.281 Sum_probs=101.1
Q ss_pred EEEEEecCCc-eEEEEEEecCCcc---ccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 6 KFFNINGSVG-ILHCAINFPSSIK---LLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 6 ~~i~I~t~dG-~I~~~l~~P~~~~---~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
++..++.+|| .+..-+..+.... .....|+||++||.. +|+. ..+.+.++..+.++||+|+.++.||+|+|+-
T Consensus 94 ~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGlt--g~S~-~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~L 170 (409)
T KOG1838|consen 94 TREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLT--GGSH-ESYVRHLVHEAQRKGYRVVVFNHRGLGGSKL 170 (409)
T ss_pred eeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCC--CCCh-hHHHHHHHHHHHhCCcEEEEECCCCCCCCcc
Confidence 3456777777 5555454444321 124679999999984 3444 3678899999999999999999999999873
Q ss_pred CCCC--ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEc
Q psy15208 82 TYDS--GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILIS 141 (1027)
Q Consensus 82 ~~~~--~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~ 141 (1027)
.-+. ..+...|+.+++++++.++|..|+..+|+||||.+-+.+..+..+..++.+.+.++
T Consensus 171 tTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~ 232 (409)
T KOG1838|consen 171 TTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVC 232 (409)
T ss_pred CCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEe
Confidence 2222 13578999999999999999999999999999999999998877755555555544
|
|
| >KOG0068|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=3e-11 Score=132.28 Aligned_cols=114 Identities=17% Similarity=0.191 Sum_probs=93.3
Q ss_pred hhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEec
Q psy15208 793 RESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTC 872 (1027)
Q Consensus 793 ~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~a 872 (1027)
+++-|.... ..+.++.|||++|+|+|.||+.+|.+++++|++|+.+|.-.. ..++...|++.++++|++..||+|..+
T Consensus 130 k~g~wnr~~-~~G~el~GKTLgvlG~GrIGseVA~r~k~~gm~vI~~dpi~~-~~~~~a~gvq~vsl~Eil~~ADFitlH 207 (406)
T KOG0068|consen 130 KEGKWNRVK-YLGWELRGKTLGVLGLGRIGSEVAVRAKAMGMHVIGYDPITP-MALAEAFGVQLVSLEEILPKADFITLH 207 (406)
T ss_pred ecCceeecc-eeeeEEeccEEEEeecccchHHHHHHHHhcCceEEeecCCCc-hHHHHhccceeeeHHHHHhhcCEEEEc
Confidence 344453322 236689999999999999999999999999999999965432 445777899999999999999999765
Q ss_pred C----CCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 873 T----GNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 873 t----G~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+ .+.++++.+.|++||+|.++||+.... -+|.+.|.
T Consensus 208 ~PLtP~T~~lin~~tfA~mKkGVriIN~aRGG-vVDe~ALv 247 (406)
T KOG0068|consen 208 VPLTPSTEKLLNDETFAKMKKGVRIINVARGG-VVDEPALV 247 (406)
T ss_pred cCCCcchhhccCHHHHHHhhCCcEEEEecCCc-eechHHHH
Confidence 4 367899999999999999999999874 46666664
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.2e-10 Score=121.59 Aligned_cols=161 Identities=17% Similarity=0.179 Sum_probs=124.2
Q ss_pred EEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCCC-
Q psy15208 6 KFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGV-GASSGTY- 83 (1027)
Q Consensus 6 ~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGh-G~S~g~~- 83 (1027)
+.+.+.++++.+.+++..|.+. .+.|.||++|+. .|-. ...+.+++.|+.+||.|++||+-+. |.+....
T Consensus 3 ~~v~~~~~~~~~~~~~a~P~~~---~~~P~VIv~hei---~Gl~--~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~ 74 (236)
T COG0412 3 TDVTIPAPDGELPAYLARPAGA---GGFPGVIVLHEI---FGLN--PHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIED 74 (236)
T ss_pred cceEeeCCCceEeEEEecCCcC---CCCCEEEEEecc---cCCc--hHHHHHHHHHHhCCcEEEechhhccCCCCCcccc
Confidence 3467888889999999999872 344999999996 2332 3588999999999999999998654 3332110
Q ss_pred ------------CCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-CC
Q psy15208 84 ------------DSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-WL 148 (1027)
Q Consensus 84 ------------~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-~~ 148 (1027)
.+......|+.+.+++|..+. ...++.++|+||||.+++.++.+.|+ +++.+...+.... ..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~---v~a~v~fyg~~~~~~~ 151 (236)
T COG0412 75 EPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPE---VKAAVAFYGGLIADDT 151 (236)
T ss_pred cHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCC---ccEEEEecCCCCCCcc
Confidence 011456889999999998764 23469999999999999999998874 8888888765442 22
Q ss_pred --CCCCCCcEEEEEeCCCCCCChHHHHhhhC
Q psy15208 149 --IPEVPKNTIIIHGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 149 --l~~i~~PvLiIhG~~D~iVP~~~~~~l~~ 177 (1027)
..++++|+++.+|..|..+|......+.+
T Consensus 152 ~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~ 182 (236)
T COG0412 152 ADAPKIKVPVLLHLAGEDPYIPAADVDALAA 182 (236)
T ss_pred cccccccCcEEEEecccCCCCChhHHHHHHH
Confidence 45889999999999999999987665544
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.5e-10 Score=150.04 Aligned_cols=99 Identities=22% Similarity=0.217 Sum_probs=74.5
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC----------CCccchHHHHHHHHHHHH
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY----------DSGNGETDDMEILLRYIQ 101 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~----------~~~~~~~~Dv~avl~~L~ 101 (1027)
..++|||+||++ ++.. .|..++..|.+ +|+|+++|+||||.|.... .+.+..++++..+++.+
T Consensus 1370 ~~~~vVllHG~~---~s~~--~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l- 1442 (1655)
T PLN02980 1370 EGSVVLFLHGFL---GTGE--DWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI- 1442 (1655)
T ss_pred CCCeEEEECCCC---CCHH--HHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh-
Confidence 357899999984 3332 57888888875 6999999999999987431 11223444444444433
Q ss_pred HhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 102 KKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 102 ~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
...+++|+||||||.+++.++.++|+ +++++|++++
T Consensus 1443 ---~~~~v~LvGhSmGG~iAl~~A~~~P~--~V~~lVlis~ 1478 (1655)
T PLN02980 1443 ---TPGKVTLVGYSMGARIALYMALRFSD--KIEGAVIISG 1478 (1655)
T ss_pred ---CCCCEEEEEECHHHHHHHHHHHhChH--hhCEEEEECC
Confidence 44589999999999999999999998 7999998874
|
|
| >PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=6.7e-11 Score=135.96 Aligned_cols=103 Identities=17% Similarity=0.187 Sum_probs=83.8
Q ss_pred hhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC-------
Q psy15208 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG------- 874 (1027)
Q Consensus 802 r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG------- 874 (1027)
|..+..+.||+|+|+|+|.||+.+|++|+++|++|+++|+ .+... .......++++++++||||+.++.
T Consensus 108 r~~g~~L~gktvGIIG~G~IG~~vA~~l~a~G~~V~~~dp--~~~~~--~~~~~~~~L~ell~~sDiI~lh~PLt~~g~~ 183 (378)
T PRK15438 108 ERDGFSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCDP--PRADR--GDEGDFRSLDELVQEADILTFHTPLFKDGPY 183 (378)
T ss_pred ccCCCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECC--ccccc--ccccccCCHHHHHhhCCEEEEeCCCCCCccc
Confidence 3346679999999999999999999999999999999974 33221 122346789999999999986553
Q ss_pred -CcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 875 -NYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 875 -~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.++++++.|+.||+|+++||+|.... +|.++|.
T Consensus 184 ~T~~li~~~~l~~mk~gailIN~aRG~v-VDe~AL~ 218 (378)
T PRK15438 184 KTLHLADEKLIRSLKPGAILINACRGAV-VDNTALL 218 (378)
T ss_pred ccccccCHHHHhcCCCCcEEEECCCchh-cCHHHHH
Confidence 678999999999999999999999853 5666664
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.18 E-value=9.8e-10 Score=122.55 Aligned_cols=149 Identities=14% Similarity=0.120 Sum_probs=99.4
Q ss_pred ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHH-HHHHHHHHHhCCcEEEEEcCCCCCC-----CCC-------
Q psy15208 15 GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKV-VQTLVRVMLSLGYISIRMNFRGVGA-----SSG------- 81 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~-~~~la~~La~~Gy~Vla~DlrGhG~-----S~g------- 81 (1027)
..+.+.+|.|+.. ...+.|+|+|+||++ ++.++.. ...+.+.++..|+.|+.+|..++|. +..
T Consensus 30 ~~~~~~vy~P~~~-~~~~~Pvv~~lHG~~---~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~ 105 (283)
T PLN02442 30 CSMTFSVYFPPAS-DSGKVPVLYWLSGLT---CTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGA 105 (283)
T ss_pred CceEEEEEcCCcc-cCCCCCEEEEecCCC---cChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCc
Confidence 4788888888742 135689999999974 3332211 1234566777899999999987762 110
Q ss_pred -CC-----CC---c---cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc---
Q psy15208 82 -TY-----DS---G---NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK--- 146 (1027)
Q Consensus 82 -~~-----~~---~---~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~--- 146 (1027)
.+ .. . ....+++...++......+..+++++||||||..++.++.++|+ +++++++++|....
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~--~~~~~~~~~~~~~~~~~ 183 (283)
T PLN02442 106 GFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPD--KYKSVSAFAPIANPINC 183 (283)
T ss_pred ceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCch--hEEEEEEECCccCcccC
Confidence 00 00 0 11233444444433323345679999999999999999999998 78889988876421
Q ss_pred -C--------------------------CCCCCCCcEEEEEeCCCCCCCh
Q psy15208 147 -W--------------------------LIPEVPKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 147 -~--------------------------~l~~i~~PvLiIhG~~D~iVP~ 169 (1027)
+ .......|++++||++|+++|.
T Consensus 184 ~~~~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~ 233 (283)
T PLN02442 184 PWGQKAFTNYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKE 233 (283)
T ss_pred chhhHHHHHHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccc
Confidence 1 0223578999999999999996
|
|
| >PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.8e-11 Score=139.39 Aligned_cols=100 Identities=20% Similarity=0.297 Sum_probs=82.8
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.||+|+|+|+|.||+.+|+++++|||+|+++|+.+.. ...++. +.++++++++||+|+.+.+ +.+++
T Consensus 146 ~~~L~gktvGIiG~G~IG~~vA~~~~~fGm~V~~~d~~~~~----~~~~~~~~~~l~ell~~sDiVslh~Plt~~T~~li 221 (409)
T PRK11790 146 SFEVRGKTLGIVGYGHIGTQLSVLAESLGMRVYFYDIEDKL----PLGNARQVGSLEELLAQSDVVSLHVPETPSTKNMI 221 (409)
T ss_pred cccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCccc----ccCCceecCCHHHHHhhCCEEEEcCCCChHHhhcc
Confidence 45799999999999999999999999999999999875421 112344 4489999999999998654 66899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+++.|++||+|++|+|+|... -+|.++|.
T Consensus 222 ~~~~l~~mk~ga~lIN~aRG~-~vde~aL~ 250 (409)
T PRK11790 222 GAEELALMKPGAILINASRGT-VVDIDALA 250 (409)
T ss_pred CHHHHhcCCCCeEEEECCCCc-ccCHHHHH
Confidence 999999999999999999974 35655554
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.1e-10 Score=132.82 Aligned_cols=123 Identities=19% Similarity=0.157 Sum_probs=85.4
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchH-HHHH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGET-DDME 94 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~-~Dv~ 94 (1027)
.+..+.|.|... ...+++|||+||+....--++-..-++++++|.++||+|+++|++|+|.|..... ..... .++.
T Consensus 173 ~~eLi~Y~P~t~--~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~-~ddY~~~~i~ 249 (532)
T TIGR01838 173 LFQLIQYEPTTE--TVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT-FDDYIRDGVI 249 (532)
T ss_pred cEEEEEeCCCCC--cCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC-hhhhHHHHHH
Confidence 455666777652 1245678999997321111111112479999999999999999999998875432 33333 4577
Q ss_pred HHHHHHHHhCCCCcEEEEEechhHHHHH----HHHHhc-CCcCCccEEEEEccC
Q psy15208 95 ILLRYIQKKYPYLPIILAGFSFGTFVQA----KLQKRL-DKEISIKILILISVA 143 (1027)
Q Consensus 95 avl~~L~~~~~~~pviLVGhSmGG~vAl----~~A~~~-p~~~~V~gLVli~p~ 143 (1027)
+.++.+....+..+++++||||||.++. .++... ++ ++++++++++.
T Consensus 250 ~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~--rv~slvll~t~ 301 (532)
T TIGR01838 250 AALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDK--RIKSATFFTTL 301 (532)
T ss_pred HHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCC--ccceEEEEecC
Confidence 8888888777777899999999999852 244454 55 68999988863
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.16 E-value=2e-10 Score=122.62 Aligned_cols=149 Identities=15% Similarity=0.204 Sum_probs=101.9
Q ss_pred EEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCC-CCCCCCC----------
Q psy15208 17 LHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGA-SSGTYDS---------- 85 (1027)
Q Consensus 17 I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~-S~g~~~~---------- 85 (1027)
+.+++..|++ .++.|.||++|++ .|-. ...+.+++.|+++||.|++||+.+... .......
T Consensus 1 ~~ay~~~P~~---~~~~~~Vvv~~d~---~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~ 72 (218)
T PF01738_consen 1 IDAYVARPEG---GGPRPAVVVIHDI---FGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFA 72 (218)
T ss_dssp EEEEEEEETT---SSSEEEEEEE-BT---TBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHH
T ss_pred CeEEEEeCCC---CCCCCEEEEEcCC---CCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHh
Confidence 4578888987 2478999999986 2322 357789999999999999999854433 1211100
Q ss_pred --ccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC-CCc---CCCCCCCCcEE
Q psy15208 86 --GNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA-VKK---WLIPEVPKNTI 157 (1027)
Q Consensus 86 --~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~-~~~---~~l~~i~~PvL 157 (1027)
.+....|+.+.+++++.+. ...++.++|+|+||.+++.++.+.+ .+++.|...|. ... .....+++|++
T Consensus 73 ~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~---~~~a~v~~yg~~~~~~~~~~~~~~~~P~l 149 (218)
T PF01738_consen 73 PRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDP---RVDAAVSFYGGSPPPPPLEDAPKIKAPVL 149 (218)
T ss_dssp HSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTT---TSSEEEEES-SSSGGGHHHHGGG--S-EE
T ss_pred hhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhcc---ccceEEEEcCCCCCCcchhhhcccCCCEe
Confidence 1234677788899998875 3457999999999999999998873 48999998882 111 13667889999
Q ss_pred EEEeCCCCCCChHHHHhhh
Q psy15208 158 IIHGELDEIIPLKDVFLWA 176 (1027)
Q Consensus 158 iIhG~~D~iVP~~~~~~l~ 176 (1027)
+++|++|+.+|.+....+.
T Consensus 150 ~~~g~~D~~~~~~~~~~~~ 168 (218)
T PF01738_consen 150 ILFGENDPFFPPEEVEALE 168 (218)
T ss_dssp EEEETT-TTS-HHHHHHHH
T ss_pred ecCccCCCCCChHHHHHHH
Confidence 9999999999999765444
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.2e-10 Score=132.71 Aligned_cols=103 Identities=19% Similarity=0.266 Sum_probs=87.1
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.||+|+|+|+|.||+.+|++++++|++|+++|+++... .+...|+...+++++++++|+|+.++. +.++++
T Consensus 145 g~~L~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~T~~~i~ 223 (333)
T PRK13243 145 GYDVYGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE-AEKELGAEYRPLEELLRESDFVSLHVPLTKETYHMIN 223 (333)
T ss_pred ccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh-hHHHcCCEecCHHHHHhhCCEEEEeCCCChHHhhccC
Confidence 456899999999999999999999999999999999876433 344557777789999999999998765 468999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.+.|+.||+|++++|+|.... +|.+.|.
T Consensus 224 ~~~~~~mk~ga~lIN~aRg~~-vd~~aL~ 251 (333)
T PRK13243 224 EERLKLMKPTAILVNTARGKV-VDTKALV 251 (333)
T ss_pred HHHHhcCCCCeEEEECcCchh-cCHHHHH
Confidence 999999999999999999843 4555554
|
|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1e-10 Score=131.36 Aligned_cols=98 Identities=15% Similarity=0.258 Sum_probs=82.0
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE--EcCHHHHhccCCEEEecCC----Cccc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL--VVTMEYAKKYGDIFVTCTG----NYHV 878 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~--v~~~~e~l~~aDvvi~atG----~~~v 878 (1027)
...+.||+|+|+|+|.||+.+|+++++||++|+++|+++.. .|+. ..+++++++++|+|+.+.+ +.++
T Consensus 117 ~~~L~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~------~~~~~~~~~l~ell~~aDiv~~~lp~t~~T~~l 190 (303)
T PRK06436 117 TKLLYNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN------DGISSIYMEPEDIMKKSDFVLISLPLTDETRGM 190 (303)
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc------cCcccccCCHHHHHhhCCEEEECCCCCchhhcC
Confidence 45799999999999999999999999999999999876432 2332 4579999999999998764 5689
Q ss_pred CcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++.+.|+.||+|+++||+|.... +|.+.|.
T Consensus 191 i~~~~l~~mk~ga~lIN~sRG~~-vd~~aL~ 220 (303)
T PRK06436 191 INSKMLSLFRKGLAIINVARADV-VDKNDML 220 (303)
T ss_pred cCHHHHhcCCCCeEEEECCCccc-cCHHHHH
Confidence 99999999999999999999854 4555554
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.5e-10 Score=120.03 Aligned_cols=123 Identities=22% Similarity=0.318 Sum_probs=94.7
Q ss_pred HHHHHHHHHhCCcEEEEEcCCCCCCCCCC------CCCccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHH
Q psy15208 54 VQTLVRVMLSLGYISIRMNFRGVGASSGT------YDSGNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQ 125 (1027)
Q Consensus 54 ~~~la~~La~~Gy~Vla~DlrGhG~S~g~------~~~~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A 125 (1027)
|....+.|+++||.|+.+|+||.+..... .......++|+..+++++..+.. ..++.++|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 34567789999999999999998864321 11234579999999999988753 34699999999999999999
Q ss_pred HhcCCcCCccEEEEEccCCCcC----------------------------------CCCC--CCCcEEEEEeCCCCCCCh
Q psy15208 126 KRLDKEISIKILILISVAVKKW----------------------------------LIPE--VPKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 126 ~~~p~~~~V~gLVli~p~~~~~----------------------------------~l~~--i~~PvLiIhG~~D~iVP~ 169 (1027)
.++|+ ++++++..+|..... .+.. +.+|+|++||++|..||+
T Consensus 83 ~~~~~--~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~ 160 (213)
T PF00326_consen 83 TQHPD--RFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPP 160 (213)
T ss_dssp HHTCC--GSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTT
T ss_pred cccce--eeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCCCCccCH
Confidence 99998 789999998753210 1344 789999999999999999
Q ss_pred HHHHhhhCC
Q psy15208 170 KDVFLWANP 178 (1027)
Q Consensus 170 ~~~~~l~~~ 178 (1027)
+++..+++.
T Consensus 161 ~~s~~~~~~ 169 (213)
T PF00326_consen 161 SQSLRLYNA 169 (213)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998877654
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.4e-09 Score=121.40 Aligned_cols=166 Identities=16% Similarity=0.060 Sum_probs=113.6
Q ss_pred EEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCC-CCC--
Q psy15208 6 KFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGA-SSG-- 81 (1027)
Q Consensus 6 ~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~-S~g-- 81 (1027)
..+.+.+.+| .++++++.|++. .++.|.||.+||.+ +... .+.... .++.+||.|+.+|.||+|. +..
T Consensus 57 y~v~f~s~~g~~V~g~l~~P~~~--~~~~Pavv~~hGyg---~~~~--~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~ 128 (320)
T PF05448_consen 57 YDVSFESFDGSRVYGWLYRPKNA--KGKLPAVVQFHGYG---GRSG--DPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYR 128 (320)
T ss_dssp EEEEEEEGGGEEEEEEEEEES-S--SSSEEEEEEE--TT-----GG--GHHHHH-HHHHTT-EEEEE--TTTSSSS-B-S
T ss_pred EEEEEEccCCCEEEEEEEecCCC--CCCcCEEEEecCCC---CCCC--Cccccc-ccccCCeEEEEecCCCCCCCCCCcc
Confidence 4577888777 899999999842 36789999999974 3322 232322 4678899999999999993 321
Q ss_pred ---------CC----CC------ccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEE
Q psy15208 82 ---------TY----DS------GNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILI 140 (1027)
Q Consensus 82 ---------~~----~~------~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli 140 (1027)
.. .+ +..+..|+...++++..... ..++.+.|.|+||.+++.+|+..| +|+++++.
T Consensus 129 ~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~---rv~~~~~~ 205 (320)
T PF05448_consen 129 GSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP---RVKAAAAD 205 (320)
T ss_dssp SBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS---T-SEEEEE
T ss_pred ccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc---cccEEEec
Confidence 00 01 12356888899999987643 347999999999999999999876 49999999
Q ss_pred ccCCCcC--------------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhh
Q psy15208 141 SVAVKKW--------------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWA 176 (1027)
Q Consensus 141 ~p~~~~~--------------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~ 176 (1027)
.|....+ +.+++++|+++-.|..|+++||+.....+
T Consensus 206 vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~y 285 (320)
T PF05448_consen 206 VPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAY 285 (320)
T ss_dssp SESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHH
T ss_pred CCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHH
Confidence 8853211 26688999999999999999999999888
Q ss_pred CCCCCc
Q psy15208 177 NPLDIP 182 (1027)
Q Consensus 177 ~~~~~~ 182 (1027)
+.+...
T Consensus 286 N~i~~~ 291 (320)
T PF05448_consen 286 NAIPGP 291 (320)
T ss_dssp CC--SS
T ss_pred hccCCC
Confidence 877654
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.7e-10 Score=138.47 Aligned_cols=129 Identities=19% Similarity=0.134 Sum_probs=100.5
Q ss_pred ecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCc-cc
Q psy15208 11 NGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSG-NG 88 (1027)
Q Consensus 11 ~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~-~~ 88 (1027)
+..|| +|++.++.|++ .++.|+||++||++........ .....+..|+++||.|+++|+||+|.|.+.+... ..
T Consensus 2 ~~~DG~~L~~~~~~P~~---~~~~P~Il~~~gyg~~~~~~~~-~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~ 77 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAG---GGPVPVILSRTPYGKDAGLRWG-LDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSD 77 (550)
T ss_pred cCCCCCEEEEEEEecCC---CCCCCEEEEecCCCCchhhccc-cccccHHHHHhCCcEEEEEeccccccCCCceEecCcc
Confidence 45677 79999999976 2478999999998643210000 1123566788999999999999999999865333 56
Q ss_pred hHHHHHHHHHHHHHh-CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 89 ETDDMEILLRYIQKK-YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~-~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
..+|+..+++|+..+ ....+++++||||||.+++.+|..+|+ .+++++..++...
T Consensus 78 ~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~--~l~aiv~~~~~~d 133 (550)
T TIGR00976 78 EAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPP--ALRAIAPQEGVWD 133 (550)
T ss_pred cchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCC--ceeEEeecCcccc
Confidence 899999999999876 233589999999999999999999887 7999998887654
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.9e-10 Score=124.50 Aligned_cols=149 Identities=18% Similarity=0.211 Sum_probs=113.0
Q ss_pred HHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEE
Q psy15208 757 GVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQV 836 (1027)
Q Consensus 757 G~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~V 836 (1027)
+-..+++++++ ..++|++.-+.. .--.-|...+.++.+...++..+..+.|++|+|+|+|.||+.+|+.|+++|++|
T Consensus 101 ~~~~l~~~a~~--~gi~v~~~~~~~-~va~~n~~~~Ae~ai~~al~~~~~~l~gk~v~IiG~G~iG~avA~~L~~~G~~V 177 (287)
T TIGR02853 101 SNPYLEQLAAD--AGVKLIELFERD-DVAIYNSIPTAEGAIMMAIEHTDFTIHGSNVMVLGFGRTGMTIARTFSALGARV 177 (287)
T ss_pred CCHHHHHHHHH--CCCeEEEEEecc-ceEEEccHhHHHHHHHHHHHhcCCCCCCCEEEEEcChHHHHHHHHHHHHCCCEE
Confidence 33455544433 455666332210 001235567788888776666677899999999999999999999999999999
Q ss_pred EEEcCCchhHHHHhhcCcEEc---CHHHHhccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 837 WIIEIDPICALQAAMEGFLVV---TMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 837 iV~d~dp~r~~~A~~~G~~v~---~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+++++++.+...+...|+... ++.+.+.++|+||+|++.. +++.+.++.||++++++|++..+.+.|+...+
T Consensus 178 ~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~aDiVint~P~~-ii~~~~l~~~k~~aliIDlas~Pg~tdf~~Ak 252 (287)
T TIGR02853 178 FVGARSSADLARITEMGLIPFPLNKLEEKVAEIDIVINTIPAL-VLTADVLSKLPKHAVIIDLASKPGGTDFEYAK 252 (287)
T ss_pred EEEeCCHHHHHHHHHCCCeeecHHHHHHHhccCCEEEECCChH-HhCHHHHhcCCCCeEEEEeCcCCCCCCHHHHH
Confidence 999999877766777777654 3566788999999998654 67888899999999999999988888875443
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.5e-09 Score=118.68 Aligned_cols=158 Identities=13% Similarity=0.110 Sum_probs=97.7
Q ss_pred EEEEEecC--CceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHH-HhCCcEEEEEcC--CCCCCCC
Q psy15208 6 KFFNINGS--VGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVM-LSLGYISIRMNF--RGVGASS 80 (1027)
Q Consensus 6 ~~i~I~t~--dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~L-a~~Gy~Vla~Dl--rGhG~S~ 80 (1027)
+.+.+.+. +..+.+.+|.|++.. ..+.|+|+|+||++. +.....+......| .+.|+.|++||. +|+|.+.
T Consensus 14 ~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~P~vvllHG~~~---~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~ 89 (275)
T TIGR02821 14 GFYRHKSETCGVPMTFGVFLPPQAA-AGPVPVLWYLSGLTC---THENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAG 89 (275)
T ss_pred EEEEEeccccCCceEEEEEcCCCcc-CCCCCEEEEccCCCC---CccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCC
Confidence 33444443 336778889997521 245799999999743 33332222223334 456999999998 5555332
Q ss_pred C-----------CCCC--------ccchHHHH-HHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEE
Q psy15208 81 G-----------TYDS--------GNGETDDM-EILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILI 138 (1027)
Q Consensus 81 g-----------~~~~--------~~~~~~Dv-~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLV 138 (1027)
. .+.+ .......+ ..+...+...+ +..+++++||||||.+++.++.++|+ .+++++
T Consensus 90 ~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~--~~~~~~ 167 (275)
T TIGR02821 90 EDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD--RFKSVS 167 (275)
T ss_pred CcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc--cceEEE
Confidence 1 0000 00112222 23333344433 33479999999999999999999998 789999
Q ss_pred EEccCCCcC---------------------------CCC--CCCCcEEEEEeCCCCCCCh
Q psy15208 139 LISVAVKKW---------------------------LIP--EVPKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 139 li~p~~~~~---------------------------~l~--~i~~PvLiIhG~~D~iVP~ 169 (1027)
+++|..... ... ....|+++.||+.|+.+|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~ 227 (275)
T TIGR02821 168 AFAPIVAPSRCPWGQKAFSAYLGADEAAWRSYDASLLVADGGRHSTILIDQGTADQFLDE 227 (275)
T ss_pred EECCccCcccCcchHHHHHHHhcccccchhhcchHHHHhhcccCCCeeEeecCCCcccCc
Confidence 888752110 001 2347888889999999998
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.1e-10 Score=131.58 Aligned_cols=112 Identities=11% Similarity=0.033 Sum_probs=85.1
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
...+.||||+|+|+|.||+.+|+++++||++|+++++.+........ -....+++++++++|+|+.+.+ +.++++
T Consensus 131 ~~~l~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~-~~~~~~l~e~l~~aDvvv~~lPlt~~T~~li~ 209 (312)
T PRK15469 131 EYHREDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQS-FAGREELSAFLSQTRVLINLLPNTPETVGIIN 209 (312)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCCCcee-ecccccHHHHHhcCCEEEECCCCCHHHHHHhH
Confidence 34689999999999999999999999999999999876533211110 0123578999999999998764 568999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh-ccceecccc
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK-KYKWENIKP 918 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~-~~~~~~~~~ 918 (1027)
.+.|++||+|++|||+|.... +|.+.|. .+....+..
T Consensus 210 ~~~l~~mk~ga~lIN~aRG~v-Vde~aL~~aL~~g~i~g 247 (312)
T PRK15469 210 QQLLEQLPDGAYLLNLARGVH-VVEDDLLAALDSGKVKG 247 (312)
T ss_pred HHHHhcCCCCcEEEECCCccc-cCHHHHHHHHhcCCeee
Confidence 999999999999999999853 5655554 333334433
|
|
| >PRK00257 erythronate-4-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.5e-10 Score=130.46 Aligned_cols=101 Identities=18% Similarity=0.206 Sum_probs=82.9
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC--------C
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG--------N 875 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG--------~ 875 (1027)
.+..+.||+|+|+|+|.||+.+|++++++|++|+++|+.. .. ...+....++++++++||+|+.+++ +
T Consensus 110 ~g~~l~gktvGIIG~G~IG~~va~~l~a~G~~V~~~Dp~~--~~--~~~~~~~~~l~ell~~aDiV~lh~Plt~~g~~~T 185 (381)
T PRK00257 110 EGVDLAERTYGVVGAGHVGGRLVRVLRGLGWKVLVCDPPR--QE--AEGDGDFVSLERILEECDVISLHTPLTKEGEHPT 185 (381)
T ss_pred cCCCcCcCEEEEECCCHHHHHHHHHHHHCCCEEEEECCcc--cc--cccCccccCHHHHHhhCCEEEEeCcCCCCccccc
Confidence 3567899999999999999999999999999999997632 21 1223456789999999999987653 5
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.++++.+.|+.||+|++|||+|.... +|.++|.
T Consensus 186 ~~li~~~~l~~mk~gailIN~aRG~v-Vde~AL~ 218 (381)
T PRK00257 186 RHLLDEAFLASLRPGAWLINASRGAV-VDNQALR 218 (381)
T ss_pred cccCCHHHHhcCCCCeEEEECCCCcc-cCHHHHH
Confidence 68999999999999999999999854 5555554
|
|
| >TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.5e-10 Score=137.58 Aligned_cols=112 Identities=19% Similarity=0.216 Sum_probs=89.6
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.||+|+|+|+|.||+.+|++|++||++|+++|+.. ....+...|+... +++++++++|+|+.+++ +.+++
T Consensus 133 g~~l~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~-~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li 211 (525)
T TIGR01327 133 GTELYGKTLGVIGLGRIGSIVAKRAKAFGMKVLAYDPYI-SPERAEQLGVELVDDLDELLARADFITVHTPLTPETRGLI 211 (525)
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCC-ChhHHHhcCCEEcCCHHHHHhhCCEEEEccCCChhhccCc
Confidence 557999999999999999999999999999999998753 2233456677755 79999999999998664 57899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh-ccceecccc
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK-KYKWENIKP 918 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~-~~~~~~~~~ 918 (1027)
+.+.|+.||+|+++||+|.... +|.++|. .+....+..
T Consensus 212 ~~~~l~~mk~ga~lIN~aRG~~-vde~aL~~aL~~g~i~g 250 (525)
T TIGR01327 212 GAEELAKMKKGVIIVNCARGGI-IDEAALYEALEEGHVRA 250 (525)
T ss_pred CHHHHhcCCCCeEEEEcCCCce-eCHHHHHHHHHcCCeeE
Confidence 9999999999999999999853 5555554 333333433
|
This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli. |
| >PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.5e-10 Score=137.64 Aligned_cols=113 Identities=21% Similarity=0.208 Sum_probs=91.1
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.||+|+|+|+|.||+.+|+++++||++|+++|+.+. ...+...|++..+++++++++|+|+.+++ +.++++
T Consensus 135 g~~l~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~~~g~~~~~l~ell~~aDiV~l~lP~t~~t~~li~ 213 (526)
T PRK13581 135 GVELYGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYIS-PERAAQLGVELVSLDELLARADFITLHTPLTPETRGLIG 213 (526)
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCC-hhHHHhcCCEEEcHHHHHhhCCEEEEccCCChHhhcCcC
Confidence 4578999999999999999999999999999999987543 23455678887799999999999998765 568999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh-ccceeccccc
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK-KYKWENIKPQ 919 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~-~~~~~~~~~~ 919 (1027)
.+.|+.||+|++++|+|.... +|.++|. .+....+...
T Consensus 214 ~~~l~~mk~ga~lIN~aRG~~-vde~aL~~aL~~g~i~gA 252 (526)
T PRK13581 214 AEELAKMKPGVRIINCARGGI-IDEAALAEALKSGKVAGA 252 (526)
T ss_pred HHHHhcCCCCeEEEECCCCce-eCHHHHHHHHhcCCeeEE
Confidence 999999999999999999853 4555554 3333344333
|
|
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=8.2e-09 Score=117.07 Aligned_cols=128 Identities=15% Similarity=0.223 Sum_probs=96.7
Q ss_pred eEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCC
Q psy15208 5 TKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 5 ~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
.+.+.+.+++|.+.+.+|.|.. ...|+||++||+++..|+.+ .+..+.+.|+. .|+.|+.+|+|.....
T Consensus 57 ~~~~~i~~~~g~i~~~~y~P~~----~~~p~vv~~HGGg~~~g~~~--~~~~~~~~la~~~g~~Vv~vdYrlape~---- 126 (318)
T PRK10162 57 TRAYMVPTPYGQVETRLYYPQP----DSQATLFYLHGGGFILGNLD--THDRIMRLLASYSGCTVIGIDYTLSPEA---- 126 (318)
T ss_pred EEEEEEecCCCceEEEEECCCC----CCCCEEEEEeCCcccCCCch--hhhHHHHHHHHHcCCEEEEecCCCCCCC----
Confidence 5567888888899999999964 34689999999887666654 35677888877 4999999999964332
Q ss_pred CCccchHHHHHHHHHHHHHh---CC--CCcEEEEEechhHHHHHHHHHhcCCc----CCccEEEEEccC
Q psy15208 84 DSGNGETDDMEILLRYIQKK---YP--YLPIILAGFSFGTFVQAKLQKRLDKE----ISIKILILISVA 143 (1027)
Q Consensus 84 ~~~~~~~~Dv~avl~~L~~~---~~--~~pviLVGhSmGG~vAl~~A~~~p~~----~~V~gLVli~p~ 143 (1027)
.+.....|+.++++|+... ++ ..+++|+|+|+||.+++.++.+..+. .+++++++++|.
T Consensus 127 -~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 194 (318)
T PRK10162 127 -RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGL 194 (318)
T ss_pred -CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCc
Confidence 1233578888888888652 33 34799999999999999998764221 258889988774
|
|
| >KOG4409|consensus | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.2e-09 Score=121.41 Aligned_cols=116 Identities=22% Similarity=0.194 Sum_probs=78.8
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCcc---chHHH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGN---GETDD 92 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~---~~~~D 92 (1027)
.+...-..+.. ..+..+||+||+|. |. ..|-.-.+.|+. .+.|+++|++|+|+|++...+.+ ....-
T Consensus 77 ~iw~~~~~~~~----~~~~plVliHGyGA--g~---g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~f 146 (365)
T KOG4409|consen 77 EIWTITVSNES----ANKTPLVLIHGYGA--GL---GLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEF 146 (365)
T ss_pred eeEEEeecccc----cCCCcEEEEeccch--hH---HHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHH
Confidence 44444444443 34566799999852 22 134444566766 89999999999999986432211 11122
Q ss_pred HHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 93 MEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 93 v~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
++.+-+| +...+..+.+|+||||||.+|..+|.+||+ +|..||+++|..
T Consensus 147 vesiE~W-R~~~~L~KmilvGHSfGGYLaa~YAlKyPe--rV~kLiLvsP~G 195 (365)
T KOG4409|consen 147 VESIEQW-RKKMGLEKMILVGHSFGGYLAAKYALKYPE--RVEKLILVSPWG 195 (365)
T ss_pred HHHHHHH-HHHcCCcceeEeeccchHHHHHHHHHhChH--hhceEEEecccc
Confidence 2222222 333456689999999999999999999999 799999999975
|
|
| >KOG2564|consensus | Back alignment and domain information |
|---|
Probab=99.04 E-value=1e-09 Score=117.94 Aligned_cols=125 Identities=18% Similarity=0.215 Sum_probs=91.2
Q ss_pred EEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCC-
Q psy15208 6 KFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL-GYISIRMNFRGVGASSGTY- 83 (1027)
Q Consensus 6 ~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~-Gy~Vla~DlrGhG~S~g~~- 83 (1027)
+.+.+.+.++++..|+..|.. ...|+++++||++.. . ..|..++..+..+ ..+|+++|+||||.+.-..
T Consensus 51 edv~i~~~~~t~n~Y~t~~~~----t~gpil~l~HG~G~S---~--LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e 121 (343)
T KOG2564|consen 51 EDVSIDGSDLTFNVYLTLPSA----TEGPILLLLHGGGSS---A--LSFAIFASELKSKIRCRCLALDLRGHGETKVENE 121 (343)
T ss_pred cccccCCCcceEEEEEecCCC----CCccEEEEeecCccc---c--hhHHHHHHHHHhhcceeEEEeeccccCccccCCh
Confidence 456677777788888888854 467999999996432 2 2477788877664 5678999999999987432
Q ss_pred --CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEc
Q psy15208 84 --DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILIS 141 (1027)
Q Consensus 84 --~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~ 141 (1027)
-+.+.+..|+.++++.+-...+ .+++||||||||.+|...|...-- ..+.|+++++
T Consensus 122 ~dlS~eT~~KD~~~~i~~~fge~~-~~iilVGHSmGGaIav~~a~~k~l-psl~Gl~viD 179 (343)
T KOG2564|consen 122 DDLSLETMSKDFGAVIKELFGELP-PQIILVGHSMGGAIAVHTAASKTL-PSLAGLVVID 179 (343)
T ss_pred hhcCHHHHHHHHHHHHHHHhccCC-CceEEEeccccchhhhhhhhhhhc-hhhhceEEEE
Confidence 2346788898888877754322 369999999999999888765321 1378888877
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=4.3e-09 Score=130.74 Aligned_cols=170 Identities=11% Similarity=0.021 Sum_probs=126.1
Q ss_pred ceEEEEEecCCc-eEEE-EEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHC-AINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~-~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
..+.+++++.|| +|++ +++.|... ..++.|+||++||... .+. ...|......|+++||.|+.+++||.|.-..
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~-~~~~~P~ll~~hGg~~--~~~-~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~ 490 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHF-RKGHNPLLVYGYGSYG--ASI-DADFSFSRLSLLDRGFVYAIVHVRGGGELGQ 490 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCC-CCCCCCEEEEEECCCC--CCC-CCCccHHHHHHHHCCcEEEEEEcCCCCccCH
Confidence 456788999999 8998 45555421 1246799999999643 222 2246666678889999999999999877653
Q ss_pred CC------CCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-------
Q psy15208 82 TY------DSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK------- 146 (1027)
Q Consensus 82 ~~------~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~------- 146 (1027)
.+ ..-.....|+.+.+++|..+. ...++.+.|.|.||.++..++.++|+ +++++|+..|....
T Consensus 491 ~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd--lf~A~v~~vp~~D~~~~~~~~ 568 (686)
T PRK10115 491 QWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPE--LFHGVIAQVPFVDVVTTMLDE 568 (686)
T ss_pred HHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChh--heeEEEecCCchhHhhhcccC
Confidence 22 112356899999999998763 23469999999999999999999999 78999988874220
Q ss_pred ----C--------------------------CCCCCCCc-EEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 147 ----W--------------------------LIPEVPKN-TIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 147 ----~--------------------------~l~~i~~P-vLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
+ .+.++..| +|++||.+|.-||+.++.+|..++
T Consensus 569 ~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~L 632 (686)
T PRK10115 569 SIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKL 632 (686)
T ss_pred CCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHH
Confidence 0 14456778 567799999999999988776643
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.03 E-value=7.9e-10 Score=116.20 Aligned_cols=122 Identities=25% Similarity=0.328 Sum_probs=95.8
Q ss_pred cEEEEEcCCCCCCCCC--CCCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 66 YISIRMNFRGVGASSG--TYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 66 y~Vla~DlrGhG~S~g--~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
|+|+++|+||+|.|+. ..........|+.+.++.+.+..+..+++++||||||.+++.++..+|+ +++++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~--~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPE--RVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGG--GEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCch--hhcCcEEEeee
Confidence 7899999999999995 1222233467777777777777777789999999999999999999999 89999999984
Q ss_pred --CC---------c-C----------------------------------------------------------------
Q psy15208 144 --VK---------K-W---------------------------------------------------------------- 147 (1027)
Q Consensus 144 --~~---------~-~---------------------------------------------------------------- 147 (1027)
.. . .
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (230)
T PF00561_consen 79 PDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNA 158 (230)
T ss_dssp SHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhcccc
Confidence 00 0 0
Q ss_pred -----------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceEeeccc
Q psy15208 148 -----------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVVVIPES 189 (1027)
Q Consensus 148 -----------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L~t~Es 189 (1027)
.+..+.+|+++++|+.|.++|+.....+.+..........+.
T Consensus 159 ~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~ 211 (230)
T PF00561_consen 159 LGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEG 211 (230)
T ss_dssp HHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETT
T ss_pred ccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCC
Confidence 156789999999999999999999988766555544444443
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.7e-09 Score=113.37 Aligned_cols=191 Identities=19% Similarity=0.127 Sum_probs=135.8
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC--
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG-- 81 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g-- 81 (1027)
.-++++++.+| +|++++..|... .++.|.||-.||++..+|. |..+.. ++..||.|+.+|.||.|.|+.
T Consensus 56 ~ydvTf~g~~g~rI~gwlvlP~~~--~~~~P~vV~fhGY~g~~g~-----~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt 127 (321)
T COG3458 56 VYDVTFTGYGGARIKGWLVLPRHE--KGKLPAVVQFHGYGGRGGE-----WHDMLH-WAVAGYAVFVMDVRGQGSSSQDT 127 (321)
T ss_pred EEEEEEeccCCceEEEEEEeeccc--CCccceEEEEeeccCCCCC-----cccccc-ccccceeEEEEecccCCCccccC
Confidence 34577888777 999999999862 2678999999998543221 222222 346799999999999998842
Q ss_pred --CC-C-C-----------------ccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEE
Q psy15208 82 --TY-D-S-----------------GNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILI 138 (1027)
Q Consensus 82 --~~-~-~-----------------~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLV 138 (1027)
.+ . + +.....|+..+++.+....+ ..++.+.|.|+||.+++.++...| ++++++
T Consensus 128 ~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~---rik~~~ 204 (321)
T COG3458 128 ADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP---RIKAVV 204 (321)
T ss_pred CCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh---hhhccc
Confidence 10 0 0 12457788888887776433 347999999999999999998876 489999
Q ss_pred EEccCCCcC----------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 139 LISVAVKKW----------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 139 li~p~~~~~----------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
+.-|....+ +..+++.|+|+.-|..|+++||+.....++.
T Consensus 205 ~~~Pfl~df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~ 284 (321)
T COG3458 205 ADYPFLSDFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNA 284 (321)
T ss_pred ccccccccchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhc
Confidence 888865432 1567899999999999999999999887776
Q ss_pred CCCce--EeeccccCCCCccccchhhhhhH
Q psy15208 179 LDIPV--VVIPESVSEGHPDKIADQISDAI 206 (1027)
Q Consensus 179 ~~~~~--L~t~Esv~~GHPdkvaDqIsdaI 206 (1027)
+..+. -..+...+++.|.-..+++..++
T Consensus 285 l~~~K~i~iy~~~aHe~~p~~~~~~~~~~l 314 (321)
T COG3458 285 LTTSKTIEIYPYFAHEGGPGFQSRQQVHFL 314 (321)
T ss_pred ccCCceEEEeeccccccCcchhHHHHHHHH
Confidence 54332 22333334566665555555444
|
|
| >KOG2382|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.9e-09 Score=115.14 Aligned_cols=105 Identities=17% Similarity=0.221 Sum_probs=85.4
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCC-CCccchHHHHHHHHHHHHHhCCCCc
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL-GYISIRMNFRGVGASSGTY-DSGNGETDDMEILLRYIQKKYPYLP 108 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~-Gy~Vla~DlrGhG~S~g~~-~~~~~~~~Dv~avl~~L~~~~~~~p 108 (1027)
...|+++++||+ -|+..| |+.++..|+.. +..|+++|.|.||.|+... .+...+++|+..+++.....+...+
T Consensus 50 ~~~Pp~i~lHGl---~GS~~N--w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~ 124 (315)
T KOG2382|consen 50 ERAPPAIILHGL---LGSKEN--WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDP 124 (315)
T ss_pred CCCCceEEeccc---ccCCCC--HHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCC
Confidence 467889999997 566665 88999999875 7899999999999998532 3456789999999998875545568
Q ss_pred EEEEEechhH-HHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 109 IILAGFSFGT-FVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 109 viLVGhSmGG-~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+.++|||||| .+++..+...|+ .+..+|+...
T Consensus 125 ~~l~GHsmGG~~~~m~~t~~~p~--~~~rliv~D~ 157 (315)
T KOG2382|consen 125 VVLLGHSMGGVKVAMAETLKKPD--LIERLIVEDI 157 (315)
T ss_pred ceecccCcchHHHHHHHHHhcCc--ccceeEEEec
Confidence 9999999999 888888899998 5777776653
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.9e-08 Score=100.23 Aligned_cols=158 Identities=20% Similarity=0.263 Sum_probs=111.4
Q ss_pred EEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC---CCCCCc-cchHHHHHHH
Q psy15208 21 INFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS---GTYDSG-NGETDDMEIL 96 (1027)
Q Consensus 21 l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~---g~~~~~-~~~~~Dv~av 96 (1027)
++.|.+ .+..+||+.||. ++++++......+..|+.+|+.|..|+++=.-... +.+++. ...-......
T Consensus 6 ~~~pag----~~~~tilLaHGA---GasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~ 78 (213)
T COG3571 6 LFDPAG----PAPVTILLAHGA---GASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVA 78 (213)
T ss_pred ccCCCC----CCCEEEEEecCC---CCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHH
Confidence 445554 355678999996 67888888889999999999999999996332211 112222 2222333445
Q ss_pred HHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC---------CCCCCCCcEEEEEeCCCCCC
Q psy15208 97 LRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---------LIPEVPKNTIIIHGELDEII 167 (1027)
Q Consensus 97 l~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---------~l~~i~~PvLiIhG~~D~iV 167 (1027)
+.++.......|+++-|+||||.++.+++....- .|+++++++-++.+. .+..++.|++|.||+.|++-
T Consensus 79 ~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A--~i~~L~clgYPfhppGKPe~~Rt~HL~gl~tPtli~qGtrD~fG 156 (213)
T COG3571 79 IAQLRAGLAEGPLIIGGKSMGGRVASMVADELQA--PIDGLVCLGYPFHPPGKPEQLRTEHLTGLKTPTLITQGTRDEFG 156 (213)
T ss_pred HHHHHhcccCCceeeccccccchHHHHHHHhhcC--CcceEEEecCccCCCCCcccchhhhccCCCCCeEEeeccccccc
Confidence 5566666566689999999999999999987755 689999998543211 36778999999999999999
Q ss_pred ChHHHHhhhCCCCCceEeec
Q psy15208 168 PLKDVFLWANPLDIPVVVIP 187 (1027)
Q Consensus 168 P~~~~~~l~~~~~~~~L~t~ 187 (1027)
..+.+..+.-..+...+...
T Consensus 157 tr~~Va~y~ls~~iev~wl~ 176 (213)
T COG3571 157 TRDEVAGYALSDPIEVVWLE 176 (213)
T ss_pred CHHHHHhhhcCCceEEEEec
Confidence 88887655444333344333
|
|
| >KOG0069|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.1e-09 Score=122.76 Aligned_cols=96 Identities=21% Similarity=0.252 Sum_probs=85.2
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.||+|+|+|+|.||+.+|++|++||+.+..+.+.+.+...+...+.+..++++.+.++|+||.|.. +.++++
T Consensus 157 g~~~~gK~vgilG~G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~~T~~liN 236 (336)
T KOG0069|consen 157 GYDLEGKTVGILGLGRIGKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTKETRHLIN 236 (336)
T ss_pred cccccCCEEEEecCcHHHHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCHHHHHHhh
Confidence 4468999999999999999999999999977777777787788887788888999999999999987653 568999
Q ss_pred HHHHhcCCCCeEEEEecCCC
Q psy15208 881 HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d 900 (1027)
++.|+.||+|++|+|++...
T Consensus 237 k~~~~~mk~g~vlVN~aRG~ 256 (336)
T KOG0069|consen 237 KKFIEKMKDGAVLVNTARGA 256 (336)
T ss_pred HHHHHhcCCCeEEEeccccc
Confidence 99999999999999999984
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.4e-08 Score=108.60 Aligned_cols=140 Identities=18% Similarity=0.119 Sum_probs=77.4
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHH-HHHhCCcEEEEEcCCC------CCC---CCCCC----CCccchHHH----
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVR-VMLSLGYISIRMNFRG------VGA---SSGTY----DSGNGETDD---- 92 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~-~La~~Gy~Vla~DlrG------hG~---S~g~~----~~~~~~~~D---- 92 (1027)
+..++|||+||+|++. + .+..+.. .+......++.++-|- .|. +.... ........+
T Consensus 12 ~~~~lvi~LHG~G~~~----~-~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s 86 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSE----D-LFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEES 86 (216)
T ss_dssp T-SEEEEEE--TTS-H----H-HHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHH
T ss_pred CCceEEEEECCCCCCc----c-hhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHH
Confidence 5789999999985422 1 2333333 2233467788776642 233 21110 111011222
Q ss_pred ---HHHHHHHHHHh-CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC-----CCC-CCCcEEEEEeC
Q psy15208 93 ---MEILLRYIQKK-YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL-----IPE-VPKNTIIIHGE 162 (1027)
Q Consensus 93 ---v~avl~~L~~~-~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~-----l~~-i~~PvLiIhG~ 162 (1027)
+..+++...+. .+..+++|.|+|+||.+|+.++.++|. .+.++|.+++..+... ... -..|++++||.
T Consensus 87 ~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~--~~~gvv~lsG~~~~~~~~~~~~~~~~~~pi~~~hG~ 164 (216)
T PF02230_consen 87 AERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPE--PLAGVVALSGYLPPESELEDRPEALAKTPILIIHGD 164 (216)
T ss_dssp HHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSS--TSSEEEEES---TTGCCCHCCHCCCCTS-EEEEEET
T ss_pred HHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCc--CcCEEEEeeccccccccccccccccCCCcEEEEecC
Confidence 22333322222 244579999999999999999999998 7999999998754321 111 26899999999
Q ss_pred CCCCCChHHHHhhhC
Q psy15208 163 LDEIIPLKDVFLWAN 177 (1027)
Q Consensus 163 ~D~iVP~~~~~~l~~ 177 (1027)
+|+++|.+.+....+
T Consensus 165 ~D~vvp~~~~~~~~~ 179 (216)
T PF02230_consen 165 EDPVVPFEWAEKTAE 179 (216)
T ss_dssp T-SSSTHHHHHHHHH
T ss_pred CCCcccHHHHHHHHH
Confidence 999999988764443
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.5e-09 Score=123.57 Aligned_cols=100 Identities=21% Similarity=0.247 Sum_probs=82.7
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCCC----cccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTGN----YHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG~----~~vi 879 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++...... .. ..+++++++++|+|+.+++. .+++
T Consensus 141 ~~~l~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~----~~~~~~l~ell~~aDiVil~lP~t~~t~~li 216 (330)
T PRK12480 141 SKPVKNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDF----LTYKDSVKEAIKDADIISLHVPANKESYHLF 216 (330)
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhh----hhccCCHHHHHhcCCEEEEeCCCcHHHHHHH
Confidence 456899999999999999999999999999999999887433211 12 34789999999999987763 4789
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.+.|+.||+|+++||+|... .+|.+.|.
T Consensus 217 ~~~~l~~mk~gavlIN~aRG~-~vd~~aL~ 245 (330)
T PRK12480 217 DKAMFDHVKKGAILVNAARGA-VINTPDLI 245 (330)
T ss_pred hHHHHhcCCCCcEEEEcCCcc-ccCHHHHH
Confidence 999999999999999999984 45666665
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=98.93 E-value=7.3e-09 Score=116.32 Aligned_cols=117 Identities=18% Similarity=0.210 Sum_probs=94.1
Q ss_pred cchhhhhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcC---HHHHhc
Q psy15208 788 NLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT---MEYAKK 864 (1027)
Q Consensus 788 n~~g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~---~~e~l~ 864 (1027)
|...+.++.+....+..+..+.|++|+|+|+|.+|+.+++.|+.+|++|+++++++.+..++...|++... +.+.+.
T Consensus 130 ns~~~aegav~~a~~~~~~~l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~ 209 (296)
T PRK08306 130 NSIPTAEGAIMMAIEHTPITIHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEVG 209 (296)
T ss_pred ccHhHHHHHHHHHHHhCCCCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhC
Confidence 44444555443333334556899999999999999999999999999999999999888888888987654 556778
Q ss_pred cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccch
Q psy15208 865 YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEV 905 (1027)
Q Consensus 865 ~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~ 905 (1027)
++|+||+|++. .+++++.++.|++++++++++..+...|+
T Consensus 210 ~aDiVI~t~p~-~~i~~~~l~~~~~g~vIIDla~~pggtd~ 249 (296)
T PRK08306 210 KIDIIFNTIPA-LVLTKEVLSKMPPEALIIDLASKPGGTDF 249 (296)
T ss_pred CCCEEEECCCh-hhhhHHHHHcCCCCcEEEEEccCCCCcCe
Confidence 99999999865 46888999999999999999987655554
|
|
| >KOG0024|consensus | Back alignment and domain information |
|---|
Probab=98.92 E-value=2e-09 Score=118.29 Aligned_cols=161 Identities=17% Similarity=0.160 Sum_probs=124.4
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcEEcC-------HHHH---h--
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFLVVT-------MEYA---K-- 863 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~v~~-------~~e~---l-- 863 (1027)
|.+..+. + .-.|.+|+|+|+|+||......|+++|| +|+++|.++.|.+.|+..|+++.. .++. +
T Consensus 159 ~HAcr~~-~-vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~ 236 (354)
T KOG0024|consen 159 VHACRRA-G-VKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEK 236 (354)
T ss_pred hhhhhhc-C-cccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHh
Confidence 4554443 4 3579999999999999999999999999 899999999999999999998543 1221 1
Q ss_pred ----ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhhccceeccccceeeeecCC-CcEEEEecCCc
Q psy15208 864 ----KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHIIFPD-GKKIILLAEGR 938 (1027)
Q Consensus 864 ----~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~~~~~~~~~~v~~y~~~d-g~~i~LLa~Gr 938 (1027)
...|+.|+|+|....++.. +..+|.++.++-+|....+++++.+....++.....+.+|...+ ..+|.++++|+
T Consensus 237 ~~g~~~~d~~~dCsG~~~~~~aa-i~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGk 315 (354)
T KOG0024|consen 237 ALGKKQPDVTFDCSGAEVTIRAA-IKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGK 315 (354)
T ss_pred hccccCCCeEEEccCchHHHHHH-HHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCC
Confidence 1379999999988766654 88899999999999888888888665432333333345665433 67999999999
Q ss_pred cccccCCCCCCcceEehhhHhHHHHHHHHh
Q psy15208 939 LVNLGCGTGHPSYVMSSSFANQTLAQIELF 968 (1027)
Q Consensus 939 lvNl~~~~G~P~~vmd~sf~~q~la~~~l~ 968 (1027)
+ ++...+++.|.+..+..+|-.
T Consensus 316 i--------~~k~lIT~r~~~~~~~eAf~~ 337 (354)
T KOG0024|consen 316 I--------DVKPLITHRYKFDDADEAFET 337 (354)
T ss_pred c--------CchhheecccccchHHHHHHH
Confidence 9 788888999987777666654
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.5e-09 Score=96.60 Aligned_cols=73 Identities=27% Similarity=0.348 Sum_probs=60.9
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---CCccchHHH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---DSGNGETDD 92 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---~~~~~~~~D 92 (1027)
+|++..|.|++ +++++|+++||++.+++ +|..+++.|+++||.|+++|+||||.|++.. ++++..++|
T Consensus 3 ~L~~~~w~p~~----~~k~~v~i~HG~~eh~~-----ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D 73 (79)
T PF12146_consen 3 KLFYRRWKPEN----PPKAVVVIVHGFGEHSG-----RYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDD 73 (79)
T ss_pred EEEEEEecCCC----CCCEEEEEeCCcHHHHH-----HHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHH
Confidence 68899999987 36899999999866543 5889999999999999999999999998643 456677888
Q ss_pred HHHHH
Q psy15208 93 MEILL 97 (1027)
Q Consensus 93 v~avl 97 (1027)
+..++
T Consensus 74 ~~~~~ 78 (79)
T PF12146_consen 74 LHQFI 78 (79)
T ss_pred HHHHh
Confidence 77665
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=4e-09 Score=117.73 Aligned_cols=94 Identities=20% Similarity=0.304 Sum_probs=82.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC---CcccCcHHH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG---NYHVITHDH 883 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG---~~~vi~~~~ 883 (1027)
.|.||+|+|||||.||+.+|++|+++|++|++++..+.....+...|+++.+++++++.+|+|+.+++ +.++++.+.
T Consensus 13 ~LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd~~t~~V~~~ei 92 (335)
T PRK13403 13 LLQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPDEQQAHVYKAEV 92 (335)
T ss_pred hhCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCChHHHHHHHHHH
Confidence 48999999999999999999999999999999976544445677789998999999999999998775 357888888
Q ss_pred HhcCCCCeEEEEecCCC
Q psy15208 884 MRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d 900 (1027)
++.||+|++|+....|+
T Consensus 93 l~~MK~GaiL~f~hgfn 109 (335)
T PRK13403 93 EENLREGQMLLFSHGFN 109 (335)
T ss_pred HhcCCCCCEEEECCCcc
Confidence 99999999999887775
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.4e-08 Score=108.88 Aligned_cols=155 Identities=13% Similarity=0.145 Sum_probs=101.4
Q ss_pred EEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-------CCccchH
Q psy15208 18 HCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY-------DSGNGET 90 (1027)
Q Consensus 18 ~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~-------~~~~~~~ 90 (1027)
.+.+|.|++.+ ..+.|+||++||.++.+..+. ....|.+.-.++||.|+.|+........+.+ .......
T Consensus 2 ~Y~lYvP~~~~-~~~~PLVv~LHG~~~~a~~~~--~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~ 78 (220)
T PF10503_consen 2 SYRLYVPPGAP-RGPVPLVVVLHGCGQSAEDFA--AGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDV 78 (220)
T ss_pred cEEEecCCCCC-CCCCCEEEEeCCCCCCHHHHH--hhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccch
Confidence 46788888632 236799999999754322111 1112333233469999999975322211111 1123456
Q ss_pred HHHHHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-C---------------C----
Q psy15208 91 DDMEILLRYIQKKYPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-W---------------L---- 148 (1027)
Q Consensus 91 ~Dv~avl~~L~~~~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-~---------------~---- 148 (1027)
..+..+++++..+++.+ +|++.|+|.||.++..++..+|+ .+.++...++.+.. . .
T Consensus 79 ~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd--~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~~~p~~ 156 (220)
T PF10503_consen 79 AFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPD--LFAAVAVVSGVPYGCAASGASALSAMRSGPRPAPAA 156 (220)
T ss_pred hhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCc--cceEEEeecccccccccCcccHHHHhhCCCCCChHH
Confidence 67788888888887654 69999999999999999999999 78887777643210 0 0
Q ss_pred -------C-CCCCCcEEEEEeCCCCCCChHHHHhhhC
Q psy15208 149 -------I-PEVPKNTIIIHGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 149 -------l-~~i~~PvLiIhG~~D~iVP~~~~~~l~~ 177 (1027)
. ..-..|++++||+.|..|.+.+.....+
T Consensus 157 ~~~a~~~~g~~~~~P~~v~hG~~D~tV~~~n~~~~~~ 193 (220)
T PF10503_consen 157 AWGARSDAGAYPGYPRIVFHGTADTTVNPQNADQLVA 193 (220)
T ss_pred HHHhhhhccCCCCCCEEEEecCCCCccCcchHHHHHH
Confidence 0 0112589999999999999988765544
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.6e-08 Score=118.29 Aligned_cols=112 Identities=14% Similarity=0.213 Sum_probs=82.2
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHh--CCcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHh--CC
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS--LGYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKK--YP 105 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~--~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~--~~ 105 (1027)
.+|++|++|||... +.+.+ +...+.+.|.. ..|+|+++|++|||.|.... ........++..++++|... .+
T Consensus 40 ~~ptvIlIHG~~~s-~~~~~-w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 40 ETKTFIVIHGWTVT-GMFES-WVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCeEEEECCCCcC-Ccchh-hHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCC
Confidence 57899999998542 22221 22236665542 26999999999999876321 11234567788888888653 34
Q ss_pred CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC
Q psy15208 106 YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW 147 (1027)
Q Consensus 106 ~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~ 147 (1027)
..+++|+||||||.+|..++.++|+ ++.++++++|+.+.|
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~--rV~rItgLDPAgP~F 157 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKH--KVNRITGLDPAGPTF 157 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCc--ceeEEEEEcCCCCcc
Confidence 5689999999999999999999887 799999999987655
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.2e-08 Score=110.86 Aligned_cols=122 Identities=21% Similarity=0.233 Sum_probs=89.5
Q ss_pred Cc-eEEEEEEec--CCccccCCccEEEEECCCCCCCCCCChH-HHH-H------HHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 14 VG-ILHCAINFP--SSIKLLKLKGVVLIAHPHPLFGGTMDNK-VVQ-T------LVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 14 dG-~I~~~l~~P--~~~~~~~~~pvVVllHG~~~~gGs~~~~-~~~-~------la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
|| +|.+.+|.| .. .++.|+||..|+++. ..... ... . ....|+++||.|+..|.||+|.|.|.
T Consensus 1 DGv~L~adv~~P~~~~---~~~~P~il~~tpY~~---~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~ 74 (272)
T PF02129_consen 1 DGVRLAADVYRPGADG---GGPFPVILTRTPYGK---GDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGE 74 (272)
T ss_dssp TS-EEEEEEEEE--TT---SSSEEEEEEEESSTC---TC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-
T ss_pred CCCEEEEEEEecCCCC---CCcccEEEEccCcCC---CCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCc
Confidence 45 789999999 43 478999999999842 21010 010 0 11238999999999999999999998
Q ss_pred CCC-ccchHHHHHHHHHHHHHhC-CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 83 YDS-GNGETDDMEILLRYIQKKY-PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 83 ~~~-~~~~~~Dv~avl~~L~~~~-~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+.. .....+|...+++|+..+. ...+|.++|.|++|..++.+|...|. .+++++...+.
T Consensus 75 ~~~~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p--~LkAi~p~~~~ 135 (272)
T PF02129_consen 75 FDPMSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPP--HLKAIVPQSGW 135 (272)
T ss_dssp B-TTSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-T--TEEEEEEESE-
T ss_pred cccCChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCC--CceEEEecccC
Confidence 765 7789999999999998872 12369999999999999999997777 68999988753
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=98.86 E-value=4.5e-08 Score=126.97 Aligned_cols=123 Identities=15% Similarity=0.168 Sum_probs=76.0
Q ss_pred ceEEEEEEecCCccc--cCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-CccchHH
Q psy15208 15 GILHCAINFPSSIKL--LKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD-SGNGETD 91 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~--~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~-~~~~~~~ 91 (1027)
+.+..+.|.|..... ....++|||+||+....-.++...-+++.+.|.++||+|+++|+ |.|..... ....+.+
T Consensus 47 ~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~ 123 (994)
T PRK07868 47 PMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLAD 123 (994)
T ss_pred CcEEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHH
Confidence 345666777764210 12457889999985432222211112358899999999999995 55443211 1234556
Q ss_pred HHHHHHHHHHH--hCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEc
Q psy15208 92 DMEILLRYIQK--KYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILIS 141 (1027)
Q Consensus 92 Dv~avl~~L~~--~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~ 141 (1027)
++..+.+.+.. .....+++|+||||||.+++.+++.+++. +++++|+++
T Consensus 124 ~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~-~v~~lvl~~ 174 (994)
T PRK07868 124 HVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSK-DIASIVTFG 174 (994)
T ss_pred HHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCC-ccceEEEEe
Confidence 65555555532 11234799999999999999998765432 688888743
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-08 Score=113.81 Aligned_cols=109 Identities=16% Similarity=0.203 Sum_probs=79.7
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHH-hCCcEEEEEcCCCCCCCCCCCC----CccchHHHHHHHHHHHHHh--C
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVML-SLGYISIRMNFRGVGASSGTYD----SGNGETDDMEILLRYIQKK--Y 104 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La-~~Gy~Vla~DlrGhG~S~g~~~----~~~~~~~Dv~avl~~L~~~--~ 104 (1027)
.+|++|++|||.. +....+...+++.|. ..+|+|+++|+++++.+. +. +.....+++..+++++.+. .
T Consensus 35 ~~p~vilIHG~~~---~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~--y~~a~~~~~~v~~~la~~l~~L~~~~g~ 109 (275)
T cd00707 35 SRPTRFIIHGWTS---SGEESWISDLRKAYLSRGDYNVIVVDWGRGANPN--YPQAVNNTRVVGAELAKFLDFLVDNTGL 109 (275)
T ss_pred CCCcEEEEcCCCC---CCCCcHHHHHHHHHHhcCCCEEEEEECccccccC--hHHHHHhHHHHHHHHHHHHHHHHHhcCC
Confidence 4788999999854 332223445665554 458999999999873322 21 1233456778888888765 3
Q ss_pred CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC
Q psy15208 105 PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW 147 (1027)
Q Consensus 105 ~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~ 147 (1027)
+..+++|+||||||.+|..++.++|+ ++++++.++|+.+.+
T Consensus 110 ~~~~i~lIGhSlGa~vAg~~a~~~~~--~v~~iv~LDPa~p~f 150 (275)
T cd00707 110 SLENVHLIGHSLGAHVAGFAGKRLNG--KLGRITGLDPAGPLF 150 (275)
T ss_pred ChHHEEEEEecHHHHHHHHHHHHhcC--ccceeEEecCCcccc
Confidence 44579999999999999999999988 799999999987644
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PRK08605 D-lactate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.86 E-value=5.1e-09 Score=119.46 Aligned_cols=101 Identities=19% Similarity=0.171 Sum_probs=81.7
Q ss_pred CccccCCEEEEEcCChhHHHHHHHH-HhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCC----Cccc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAM-RALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTG----NYHV 878 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a-~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG----~~~v 878 (1027)
+..+.|++|+|+|+|.||+.+|+++ +++|++|+++|+++..... .+++. .+++++++++|+|+.+++ +.++
T Consensus 141 ~~~l~g~~VgIIG~G~IG~~vA~~L~~~~g~~V~~~d~~~~~~~~---~~~~~~~~l~ell~~aDvIvl~lP~t~~t~~l 217 (332)
T PRK08605 141 SRSIKDLKVAVIGTGRIGLAVAKIFAKGYGSDVVAYDPFPNAKAA---TYVDYKDTIEEAVEGADIVTLHMPATKYNHYL 217 (332)
T ss_pred cceeCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCccHhHH---hhccccCCHHHHHHhCCEEEEeCCCCcchhhh
Confidence 4568999999999999999999999 7899999999887643321 23343 479999999999998765 3578
Q ss_pred CcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++.+.++.||+|++++|++... .+|...+.
T Consensus 218 i~~~~l~~mk~gailIN~sRG~-~vd~~aL~ 247 (332)
T PRK08605 218 FNADLFKHFKKGAVFVNCARGS-LVDTKALL 247 (332)
T ss_pred cCHHHHhcCCCCcEEEECCCCc-ccCHHHHH
Confidence 8888899999999999999974 44555554
|
|
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.3e-08 Score=117.08 Aligned_cols=150 Identities=17% Similarity=0.229 Sum_probs=109.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhh-cCcEEc-CHHH--------Hh---ccCCEEEecC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAM-EGFLVV-TMEY--------AK---KYGDIFVTCT 873 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~-~G~~v~-~~~e--------~l---~~aDvvi~at 873 (1027)
..+.+|+|+|+|+||...++.++.+|+ +|+++|.++.|+..|.. .|.++. +..+ .+ ..+|++|+|+
T Consensus 167 ~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~ 246 (350)
T COG1063 167 RPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAV 246 (350)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECC
Confidence 345599999999999999999999998 79999999999999987 777633 2211 11 1489999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCCCcc---cchhhhhccceeccccc--eeeeecCCCcEEEEecCCccccccCCCCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHFDNE---IEVEKLKKYKWENIKPQ--VDHIIFPDGKKIILLAEGRLVNLGCGTGH 948 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~d~e---id~~~l~~~~~~~~~~~--v~~y~~~dg~~i~LLa~GrlvNl~~~~G~ 948 (1027)
|+...+. +.++.+++++.++.+|.+..+ ++...+...+....... ...+.+ ...+.+|++|++ .
T Consensus 247 G~~~~~~-~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~--~~~~~ll~~g~i--------~ 315 (350)
T COG1063 247 GSPPALD-QALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDF--ERALDLLASGKI--------D 315 (350)
T ss_pred CCHHHHH-HHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccH--HHHHHHHHcCCC--------C
Confidence 9877555 459999999999999998444 33433333333333331 122333 368899999999 7
Q ss_pred CcceEehhhHhHHHHHHHHh
Q psy15208 949 PSYVMSSSFANQTLAQIELF 968 (1027)
Q Consensus 949 P~~vmd~sf~~q~la~~~l~ 968 (1027)
|..+.++.+.+..++..|-.
T Consensus 316 ~~~lit~~~~~~~~~~a~~~ 335 (350)
T COG1063 316 PEKLITHRLPLDDAAEAYEL 335 (350)
T ss_pred hhHceEeeccHHHHHHHHHH
Confidence 77788888887666665544
|
|
| >KOG2984|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.6e-08 Score=104.16 Aligned_cols=167 Identities=18% Similarity=0.247 Sum_probs=109.2
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHH-HhCCcEEEEEcCCCCCCCCCCCCC--ccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVM-LSLGYISIRMNFRGVGASSGTYDS--GNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~L-a~~Gy~Vla~DlrGhG~S~g~~~~--~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
..|+++.|. .++.+.+ |......| -..-+.++++|-||+|.|...... .+-...|.+..++.++.. ...|+.
T Consensus 43 ~~iLlipGa--lGs~~tD--f~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL-k~~~fs 117 (277)
T KOG2984|consen 43 NYILLIPGA--LGSYKTD--FPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL-KLEPFS 117 (277)
T ss_pred ceeEecccc--ccccccc--CCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh-CCCCee
Confidence 456788885 2333333 44333333 333489999999999999854322 233566666666665543 344899
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC----------------cC---------------------------
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK----------------KW--------------------------- 147 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~----------------~~--------------------------- 147 (1027)
++|+|-||..++.+|+++++ .|..+|.++.... .|
T Consensus 118 vlGWSdGgiTalivAak~~e--~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~ 195 (277)
T KOG2984|consen 118 VLGWSDGGITALIVAAKGKE--KVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVDV 195 (277)
T ss_pred EeeecCCCeEEEEeeccChh--hhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHHH
Confidence 99999999999999999998 7999999986411 11
Q ss_pred ---------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceE-eeccccCCCCccccchhhhhhHHH
Q psy15208 148 ---------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVV-VIPESVSEGHPDKIADQISDAILD 208 (1027)
Q Consensus 148 ---------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L-~t~Esv~~GHPdkvaDqIsdaILD 208 (1027)
.+++++||++|+||..|++++..++--+........+ ..++. .+...-+.+++...-++|
T Consensus 196 v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peG-kHn~hLrya~eFnklv~d 271 (277)
T KOG2984|consen 196 VDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEG-KHNFHLRYAKEFNKLVLD 271 (277)
T ss_pred HHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCC-CcceeeechHHHHHHHHH
Confidence 2788999999999999999998776544443333333 22332 222234555555544444
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.9e-08 Score=102.81 Aligned_cols=133 Identities=17% Similarity=0.240 Sum_probs=87.9
Q ss_pred EEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC--CCCcEEEEE
Q psy15208 36 VLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKY--PYLPIILAG 113 (1027)
Q Consensus 36 VVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~--~~~pviLVG 113 (1027)
|+++||+ +++...+++..|.+.|... ++|-.+|+ ..+ +....++.+.+.. ...+++|||
T Consensus 1 v~IvhG~---~~s~~~HW~~wl~~~l~~~-~~V~~~~~--------~~P-------~~~~W~~~l~~~i~~~~~~~ilVa 61 (171)
T PF06821_consen 1 VLIVHGY---GGSPPDHWQPWLERQLENS-VRVEQPDW--------DNP-------DLDEWVQALDQAIDAIDEPTILVA 61 (171)
T ss_dssp EEEE--T---TSSTTTSTHHHHHHHHTTS-EEEEEC----------TS---------HHHHHHHHHHCCHC-TTTEEEEE
T ss_pred CEEeCCC---CCCCccHHHHHHHHhCCCC-eEEecccc--------CCC-------CHHHHHHHHHHHHhhcCCCeEEEE
Confidence 6899998 4444444666677788765 77777666 112 2444555555432 234699999
Q ss_pred echhHHHHHHHHH-hcCCcCCccEEEEEccCCCc----C----------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 114 FSFGTFVQAKLQK-RLDKEISIKILILISVAVKK----W----------LIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 114 hSmGG~vAl~~A~-~~p~~~~V~gLVli~p~~~~----~----------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
||+|+..++.+++ ..+. +++|+++++|+-.. + ....+..|.+++.+++|+++|++.+..+++.
T Consensus 62 HSLGc~~~l~~l~~~~~~--~v~g~lLVAp~~~~~~~~~~~~~~~f~~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~ 139 (171)
T PF06821_consen 62 HSLGCLTALRWLAEQSQK--KVAGALLVAPFDPDDPEPFPPELDGFTPLPRDPLPFPSIVIASDNDPYVPFERAQRLAQR 139 (171)
T ss_dssp ETHHHHHHHHHHHHTCCS--SEEEEEEES--SCGCHHCCTCGGCCCTTSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHH
T ss_pred eCHHHHHHHHHHhhcccc--cccEEEEEcCCCcccccchhhhccccccCcccccCCCeEEEEcCCCCccCHHHHHHHHHH
Confidence 9999999999994 4444 89999999987542 1 1223347889999999999999999999999
Q ss_pred CCCceEeeccc
Q psy15208 179 LDIPVVVIPES 189 (1027)
Q Consensus 179 ~~~~~L~t~Es 189 (1027)
+...++..++.
T Consensus 140 l~a~~~~~~~~ 150 (171)
T PF06821_consen 140 LGAELIILGGG 150 (171)
T ss_dssp HT-EEEEETS-
T ss_pred cCCCeEECCCC
Confidence 88777766653
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.7e-08 Score=116.49 Aligned_cols=92 Identities=23% Similarity=0.247 Sum_probs=78.7
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc--CH-H--------------H---------
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV--TM-E--------------Y--------- 861 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~--~~-~--------------e--------- 861 (1027)
..|++|+|+|+|+||+..++.++.+||+|+++|+++.|+.++...|.+.. +. + +
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~ 242 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALF 242 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999998732 11 0 1
Q ss_pred --HhccCCEEEecCCCc-----ccCcHHHHhcCCCCeEEEEecCC
Q psy15208 862 --AKKYGDIFVTCTGNY-----HVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 862 --~l~~aDvvi~atG~~-----~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.+.++|++|+|+|.+ .++.++.++.||+|++++++|..
T Consensus 243 ~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~ 287 (509)
T PRK09424 243 AEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAE 287 (509)
T ss_pred HhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccC
Confidence 124699999999863 36678999999999999999984
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.1e-06 Score=95.94 Aligned_cols=137 Identities=22% Similarity=0.246 Sum_probs=101.8
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC---ccchHHHHHHHHHHHHHhCCCC
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDS---GNGETDDMEILLRYIQKKYPYL 107 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~---~~~~~~Dv~avl~~L~~~~~~~ 107 (1027)
.+.++||=+||.+ |+-. .|..+...|.+.|++++.+++||+|.+++.+.. ......-+.++++.+... .
T Consensus 33 s~~gTVv~~hGsP---GSH~--DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~---~ 104 (297)
T PF06342_consen 33 SPLGTVVAFHGSP---GSHN--DFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIK---G 104 (297)
T ss_pred CCceeEEEecCCC---CCcc--chhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCC---C
Confidence 4677999999964 3333 377899999999999999999999999875422 122334444555544332 4
Q ss_pred cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC----------------------------------------
Q psy15208 108 PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---------------------------------------- 147 (1027)
Q Consensus 108 pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---------------------------------------- 147 (1027)
+++++|||.|+-.|+.++..+| ..|+++++|+.-+.
T Consensus 105 ~~i~~gHSrGcenal~la~~~~----~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV 180 (297)
T PF06342_consen 105 KLIFLGHSRGCENALQLAVTHP----LHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKV 180 (297)
T ss_pred ceEEEEeccchHHHHHHHhcCc----cceEEEecCCccccccCcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeee
Confidence 6999999999999999999985 57999999852210
Q ss_pred --------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 148 --------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 148 --------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
.+.+-+.|+++.+|.+|.++.-+-+.+.+...
T Consensus 181 ~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f 238 (297)
T PF06342_consen 181 SDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF 238 (297)
T ss_pred cChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh
Confidence 04455689999999999999888887766544
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.5e-07 Score=99.90 Aligned_cols=132 Identities=20% Similarity=0.285 Sum_probs=95.3
Q ss_pred EEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy15208 20 AINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRY 99 (1027)
Q Consensus 20 ~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~ 99 (1027)
.++.|.. .+..|+|||+||+. ..+..|..+.++++++||.|+.+|+...... ......+++.++++|
T Consensus 7 ~v~~P~~---~g~yPVv~f~~G~~-----~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~-----~~~~~~~~~~~vi~W 73 (259)
T PF12740_consen 7 LVYYPSS---AGTYPVVLFLHGFL-----LINSWYSQLLEHVASHGYIVVAPDLYSIGGP-----DDTDEVASAAEVIDW 73 (259)
T ss_pred EEEecCC---CCCcCEEEEeCCcC-----CCHHHHHHHHHHHHhCceEEEEecccccCCC-----CcchhHHHHHHHHHH
Confidence 4556765 36799999999973 2344688999999999999999997654331 223467888889999
Q ss_pred HHHhC----------CCCcEEEEEechhHHHHHHHHHhcCC---cCCccEEEEEccCCC------------cCCCCC--C
Q psy15208 100 IQKKY----------PYLPIILAGFSFGTFVQAKLQKRLDK---EISIKILILISVAVK------------KWLIPE--V 152 (1027)
Q Consensus 100 L~~~~----------~~~pviLVGhSmGG~vAl~~A~~~p~---~~~V~gLVli~p~~~------------~~~l~~--i 152 (1027)
+.+.. +..++.|.|||.||-+|..++...-+ ..+++++++++|.-. .+.... .
T Consensus 74 l~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~~P~v~~~~p~s~~~ 153 (259)
T PF12740_consen 74 LAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQTEPPVLTYTPQSFDF 153 (259)
T ss_pred HHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCCCCccccCcccccCC
Confidence 87632 23469999999999999999988721 126999999998642 111122 3
Q ss_pred CCcEEEEEeCCC
Q psy15208 153 PKNTIIIHGELD 164 (1027)
Q Consensus 153 ~~PvLiIhG~~D 164 (1027)
..|++++-..-.
T Consensus 154 ~~P~lviGtGLg 165 (259)
T PF12740_consen 154 SMPALVIGTGLG 165 (259)
T ss_pred CCCeEEEecccC
Confidence 489988854444
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.1e-06 Score=93.60 Aligned_cols=163 Identities=17% Similarity=0.161 Sum_probs=99.7
Q ss_pred EEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCCC
Q psy15208 6 KFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGV-GASSGTY 83 (1027)
Q Consensus 6 ~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGh-G~S~g~~ 83 (1027)
-...+...+| +|..+...|+.. .....++||+..|| +..++ .+.+++.+|+..||.|+.+|.-.| |.|+|..
T Consensus 3 idhvi~~~~~~~I~vwet~P~~~-~~~~~~tiliA~Gf---~rrmd--h~agLA~YL~~NGFhViRyDsl~HvGlSsG~I 76 (294)
T PF02273_consen 3 IDHVIRLEDGRQIRVWETRPKNN-EPKRNNTILIAPGF---ARRMD--HFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI 76 (294)
T ss_dssp EEEEEEETTTEEEEEEEE---TT-S---S-EEEEE-TT----GGGG--GGHHHHHHHHTTT--EEEE---B---------
T ss_pred ccceeEcCCCCEEEEeccCCCCC-CcccCCeEEEecch---hHHHH--HHHHHHHHHhhCCeEEEeccccccccCCCCCh
Confidence 3456677777 688888888762 22456899999997 45665 488999999999999999998776 8899865
Q ss_pred C--CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC----------------
Q psy15208 84 D--SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK---------------- 145 (1027)
Q Consensus 84 ~--~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~---------------- 145 (1027)
. +......|+..+++|+... +..++.|+.-|+.|.+|+..|.+. .+.-+|..-+...
T Consensus 77 ~eftms~g~~sL~~V~dwl~~~-g~~~~GLIAaSLSaRIAy~Va~~i----~lsfLitaVGVVnlr~TLe~al~~Dyl~~ 151 (294)
T PF02273_consen 77 NEFTMSIGKASLLTVIDWLATR-GIRRIGLIAASLSARIAYEVAADI----NLSFLITAVGVVNLRDTLEKALGYDYLQL 151 (294)
T ss_dssp ----HHHHHHHHHHHHHHHHHT-T---EEEEEETTHHHHHHHHTTTS------SEEEEES--S-HHHHHHHHHSS-GGGS
T ss_pred hhcchHHhHHHHHHHHHHHHhc-CCCcchhhhhhhhHHHHHHHhhcc----CcceEEEEeeeeeHHHHHHHHhccchhhc
Confidence 3 3345688999999999954 666799999999999999999854 3566665554321
Q ss_pred ----------------------------cC--------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 146 ----------------------------KW--------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 146 ----------------------------~~--------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
.| .+..+.+|++.+++.+|.+|.......+....
T Consensus 152 ~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~ 221 (294)
T PF02273_consen 152 PIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNI 221 (294)
T ss_dssp -GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-
T ss_pred chhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhc
Confidence 00 16678999999999999999999988776643
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.4e-07 Score=98.58 Aligned_cols=137 Identities=20% Similarity=0.225 Sum_probs=88.7
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC-----------CCCCCccchHHHHHHHHHH
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS-----------GTYDSGNGETDDMEILLRY 99 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~-----------g~~~~~~~~~~Dv~avl~~ 99 (1027)
+..|+||++||+| ++. ..+-++.+.+.. .+.++.+. |.-.-. +.+ +.+....+...+.++
T Consensus 16 p~~~~iilLHG~G---gde--~~~~~~~~~~~P-~~~~is~r--G~v~~~g~~~~f~~~~~~~~-d~edl~~~~~~~~~~ 86 (207)
T COG0400 16 PAAPLLILLHGLG---GDE--LDLVPLPELILP-NATLVSPR--GPVAENGGPRFFRRYDEGSF-DQEDLDLETEKLAEF 86 (207)
T ss_pred CCCcEEEEEecCC---CCh--hhhhhhhhhcCC-CCeEEcCC--CCccccCcccceeecCCCcc-chhhHHHHHHHHHHH
Confidence 4578999999974 332 224445555444 34444432 211100 111 122333444444444
Q ss_pred H---HHhCCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC--C-CCCCCcEEEEEeCCCCCCChHH
Q psy15208 100 I---QKKYPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL--I-PEVPKNTIIIHGELDEIIPLKD 171 (1027)
Q Consensus 100 L---~~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~--l-~~i~~PvLiIhG~~D~iVP~~~ 171 (1027)
+ ..+++. .+++++|+|+|+.+++.+..++|. .++++++.+|..+... . ..-..|++++||..|+++|...
T Consensus 87 l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~--~~~~ail~~g~~~~~~~~~~~~~~~pill~hG~~Dpvvp~~~ 164 (207)
T COG0400 87 LEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPG--LFAGAILFSGMLPLEPELLPDLAGTPILLSHGTEDPVVPLAL 164 (207)
T ss_pred HHHHHHHhCCChhheEEEecChHHHHHHHHHHhCch--hhccchhcCCcCCCCCccccccCCCeEEEeccCcCCccCHHH
Confidence 4 344443 579999999999999999999998 7899999998765432 3 2345899999999999999998
Q ss_pred HHhhhCC
Q psy15208 172 VFLWANP 178 (1027)
Q Consensus 172 ~~~l~~~ 178 (1027)
+.++.+.
T Consensus 165 ~~~l~~~ 171 (207)
T COG0400 165 AEALAEY 171 (207)
T ss_pred HHHHHHH
Confidence 8766553
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.9e-07 Score=107.30 Aligned_cols=116 Identities=15% Similarity=0.128 Sum_probs=87.3
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHH-------HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccc
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVV-------QTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNG 88 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~-------~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~ 88 (1027)
.+..+.|.|... ..-+.+||+++++- |+.| +++.++|.++||.|+.+|+++-+.+.... +++.
T Consensus 200 l~eLiqY~P~te--~v~~~PLLIVPp~I-------NK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~-~ldD 269 (560)
T TIGR01839 200 VLELIQYKPITE--QQHARPLLVVPPQI-------NKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHREW-GLST 269 (560)
T ss_pred ceEEEEeCCCCC--CcCCCcEEEechhh-------hhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcCC-CHHH
Confidence 456667777541 12345678999862 2223 67999999999999999999877665443 4455
Q ss_pred hHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHH----HHHhcCCcCCccEEEEEcc
Q psy15208 89 ETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAK----LQKRLDKEISIKILILISV 142 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~----~A~~~p~~~~V~gLVli~p 142 (1027)
.++.+.+.++.++...+..++.++||||||.++.. +++++++. +|+.++++.+
T Consensus 270 Yv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~-~V~sltllat 326 (560)
T TIGR01839 270 YVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLR-KVNSLTYLVS 326 (560)
T ss_pred HHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCC-ceeeEEeeec
Confidence 66788889999988878888999999999999886 67777642 5899887775
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=98.63 E-value=9e-08 Score=118.42 Aligned_cols=92 Identities=17% Similarity=0.093 Sum_probs=71.9
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC---------------C----------CCc
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT---------------Y----------DSG 86 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~---------------~----------~~~ 86 (1027)
..|+|||+||++. .. ..|..+++.|+++||+|+++|+||||.|... | ..+
T Consensus 448 g~P~VVllHG~~g---~~--~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~ 522 (792)
T TIGR03502 448 GWPVVIYQHGITG---AK--ENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNL 522 (792)
T ss_pred CCcEEEEeCCCCC---CH--HHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCH
Confidence 3579999999843 33 2588999999989999999999999999432 1 133
Q ss_pred cchHHHHHHHHHHHH------Hh------CCCCcEEEEEechhHHHHHHHHHhc
Q psy15208 87 NGETDDMEILLRYIQ------KK------YPYLPIILAGFSFGTFVQAKLQKRL 128 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~------~~------~~~~pviLVGhSmGG~vAl~~A~~~ 128 (1027)
+..+.|+..+...+. .. ++..+++++||||||.+++.++...
T Consensus 523 rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 523 RQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 556788888888776 22 4567899999999999999999763
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=7.7e-07 Score=103.76 Aligned_cols=122 Identities=11% Similarity=0.020 Sum_probs=73.8
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCC-----CC---hHHHHHHH---HHHHhCCcEEEEEcCCCCCCCCCC--
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGT-----MD---NKVVQTLV---RVMLSLGYISIRMNFRGVGASSGT-- 82 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs-----~~---~~~~~~la---~~La~~Gy~Vla~DlrGhG~S~g~-- 82 (1027)
++.+..|...+ ....++||++|++..++-. .+ ..+|..+. +.|--.-|-|+++|..|.|.|...
T Consensus 42 ~~~Y~t~G~ln---~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 42 QMGYETYGTLN---RAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred eEEEEeccccC---CCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 45555565433 1346899999998432100 00 11233332 223334699999999998763210
Q ss_pred ---------CC-------Ccc-chHHHHHHHHHHHHHhCCCCcEE-EEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 83 ---------YD-------SGN-GETDDMEILLRYIQKKYPYLPII-LAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 83 ---------~~-------~~~-~~~~Dv~avl~~L~~~~~~~pvi-LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+. ++. -...|....+..+.+..+..++. ++||||||++++.+|.++|+ +++++|++++
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~--~v~~lv~ia~ 194 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPH--MVERMIGVIG 194 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEec
Confidence 00 111 12444433333333445566775 99999999999999999999 7999998853
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.6e-07 Score=107.20 Aligned_cols=150 Identities=19% Similarity=0.246 Sum_probs=104.1
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc---cCCEEEecCCCcc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK---YGDIFVTCTGNYH 877 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~---~aDvvi~atG~~~ 877 (1027)
..|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|++ +++ ..+... ..|++++++|...
T Consensus 168 ~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~~D~vid~~G~~~ 247 (343)
T PRK09880 168 LQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPS 247 (343)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCCCCEEEECCCCHH
Confidence 479999999999999999999999999 699999999999889999986 332 222222 2799999999875
Q ss_pred cCcHHHHhcCCCCeEEEEecCCCc--ccchhhhhccceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEeh
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFDN--EIEVEKLKKYKWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSS 955 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d~--eid~~~l~~~~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~ 955 (1027)
.+. ..++.|+++|.++.+|.... +++...+...+............+ .+.+.++++|++ .|..+++.
T Consensus 248 ~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~--~~~~~l~~~g~i--------~~~~~i~~ 316 (343)
T PRK09880 248 SIN-TCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEF--NTAVSWLANGVI--------NPLPLLSA 316 (343)
T ss_pred HHH-HHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccH--HHHHHHHHcCCC--------CchhheEE
Confidence 444 45899999999999997643 344332221122111111100111 346667777777 56566777
Q ss_pred hhHhHHHHHHHHh
Q psy15208 956 SFANQTLAQIELF 968 (1027)
Q Consensus 956 sf~~q~la~~~l~ 968 (1027)
.|.+..+.+.+-.
T Consensus 317 ~~~l~~~~~A~~~ 329 (343)
T PRK09880 317 EYPFTDLEEALIF 329 (343)
T ss_pred EEEHHHHHHHHHH
Confidence 7888877776654
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.7e-07 Score=99.04 Aligned_cols=115 Identities=18% Similarity=0.212 Sum_probs=90.1
Q ss_pred EEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHH
Q psy15208 17 LHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEIL 96 (1027)
Q Consensus 17 I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~av 96 (1027)
....++.|.. .+..|+|+|+||+ ...+.+|..+..+++++||-|+++++-.. .. ++....++++.++
T Consensus 33 kpLlI~tP~~---~G~yPVilF~HG~-----~l~ns~Ys~lL~HIASHGfIVVAPQl~~~--~~---p~~~~Ei~~aa~V 99 (307)
T PF07224_consen 33 KPLLIVTPSE---AGTYPVILFLHGF-----NLYNSFYSQLLAHIASHGFIVVAPQLYTL--FP---PDGQDEIKSAASV 99 (307)
T ss_pred CCeEEecCCc---CCCccEEEEeech-----hhhhHHHHHHHHHHhhcCeEEEechhhcc--cC---CCchHHHHHHHHH
Confidence 4445566655 4679999999997 33467899999999999999999999642 11 3445678999999
Q ss_pred HHHHHHhC----------CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 97 LRYIQKKY----------PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 97 l~~L~~~~----------~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
++|+.... ...++.|+|||.||..|..+|..+....++++||-++|..
T Consensus 100 ~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 100 INWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred HHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 99998642 1246999999999999999999886545689999999853
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.7e-07 Score=97.03 Aligned_cols=138 Identities=15% Similarity=0.241 Sum_probs=96.4
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHH----hCCCC
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQK----KYPYL 107 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~----~~~~~ 107 (1027)
.++-++++|=. ||+. ..|+.|...|.. -+.++++++||+|..-+.. ...|++.+.+.+.. .+...
T Consensus 6 ~~~~L~cfP~A---GGsa--~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep-----~~~di~~Lad~la~el~~~~~d~ 74 (244)
T COG3208 6 ARLRLFCFPHA---GGSA--SLFRSWSRRLPA-DIELLAVQLPGRGDRFGEP-----LLTDIESLADELANELLPPLLDA 74 (244)
T ss_pred CCceEEEecCC---CCCH--HHHHHHHhhCCc-hhheeeecCCCcccccCCc-----ccccHHHHHHHHHHHhccccCCC
Confidence 34445555532 3332 368899998865 6999999999999875542 24445555544443 23456
Q ss_pred cEEEEEechhHHHHHHHHHhcCCc-CCccEEEEEccCCCcC---------------------------------------
Q psy15208 108 PIILAGFSFGTFVQAKLQKRLDKE-ISIKILILISVAVKKW--------------------------------------- 147 (1027)
Q Consensus 108 pviLVGhSmGG~vAl~~A~~~p~~-~~V~gLVli~p~~~~~--------------------------------------- 147 (1027)
|+.++||||||++|..+|.+.... ..+.++.+.+...+..
T Consensus 75 P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~L 154 (244)
T COG3208 75 PFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFL 154 (244)
T ss_pred CeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHH
Confidence 899999999999999999886542 2356777776433211
Q ss_pred ----------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 148 ----------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 148 ----------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
.-..+.+|+.++.|++|..+..+....|.+..+
T Consensus 155 PilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~ 203 (244)
T COG3208 155 PILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTK 203 (244)
T ss_pred HHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhc
Confidence 033678999999999999999999998877644
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=98.58 E-value=2e-06 Score=90.42 Aligned_cols=123 Identities=17% Similarity=0.214 Sum_probs=81.7
Q ss_pred EEEECCCCCCCCCCChHHHHHHHHHHHhCC--cEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEE
Q psy15208 36 VLIAHPHPLFGGTMDNKVVQTLVRVMLSLG--YISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAG 113 (1027)
Q Consensus 36 VVllHG~~~~gGs~~~~~~~~la~~La~~G--y~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVG 113 (1027)
++++||+.+ +..+.-...+.+++++.+ ..+..+|++- . ..++...++.+........+.|+|
T Consensus 2 ilYlHGF~S---sp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~---------~----p~~a~~~l~~~i~~~~~~~~~liG 65 (187)
T PF05728_consen 2 ILYLHGFNS---SPQSFKAQALKQYFAEHGPDIQYPCPDLPP---------F----PEEAIAQLEQLIEELKPENVVLIG 65 (187)
T ss_pred eEEecCCCC---CCCCHHHHHHHHHHHHhCCCceEECCCCCc---------C----HHHHHHHHHHHHHhCCCCCeEEEE
Confidence 689999854 333334566777787765 4566666651 1 222333333333333433599999
Q ss_pred echhHHHHHHHHHhcCCcCCccEEEEEccCCCcC--------------------------------CC--CCCCCcEEEE
Q psy15208 114 FSFGTFVQAKLQKRLDKEISIKILILISVAVKKW--------------------------------LI--PEVPKNTIII 159 (1027)
Q Consensus 114 hSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~--------------------------------~l--~~i~~PvLiI 159 (1027)
.||||..|..++.+++- ++ |++.|+..++ .. ..-+.+++++
T Consensus 66 SSlGG~~A~~La~~~~~----~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~~~~~~lvl 140 (187)
T PF05728_consen 66 SSLGGFYATYLAERYGL----PA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVPYPTNPERYLVL 140 (187)
T ss_pred EChHHHHHHHHHHHhCC----CE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEeccccCCCccEEEE
Confidence 99999999999998853 44 8889875533 01 1224689999
Q ss_pred EeCCCCCCChHHHHhhhCCC
Q psy15208 160 HGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 160 hG~~D~iVP~~~~~~l~~~~ 179 (1027)
+++.|+++++..+.......
T Consensus 141 l~~~DEvLd~~~a~~~~~~~ 160 (187)
T PF05728_consen 141 LQTGDEVLDYREAVAKYRGC 160 (187)
T ss_pred EecCCcccCHHHHHHHhcCc
Confidence 99999999998877665543
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.7e-07 Score=94.81 Aligned_cols=92 Identities=23% Similarity=0.291 Sum_probs=71.8
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCch-hHHHHhhcCcEEcCHHHHhccCCEEEecCCC---cccCcHHH
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPI-CALQAAMEGFLVVTMEYAKKYGDIFVTCTGN---YHVITHDH 883 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~-r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~---~~vi~~~~ 883 (1027)
|.+|+|.|+|||.-|+..|+.||..|.+|+|..+... ....|..+||++.+.+|+++.+|+|+..++. +.+..++-
T Consensus 2 l~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eAv~~aDvV~~L~PD~~q~~vy~~~I 81 (165)
T PF07991_consen 2 LKGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEAVKKADVVMLLLPDEVQPEVYEEEI 81 (165)
T ss_dssp HCTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHHHHC-SEEEE-S-HHHHHHHHHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHHHhhCCEEEEeCChHHHHHHHHHHH
Confidence 6899999999999999999999999999999877665 6778999999999999999999999988764 35555666
Q ss_pred HhcCCCCeEEEEecCC
Q psy15208 884 MRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~ 899 (1027)
...||+|..|+..-.|
T Consensus 82 ~p~l~~G~~L~fahGf 97 (165)
T PF07991_consen 82 APNLKPGATLVFAHGF 97 (165)
T ss_dssp HHHS-TT-EEEESSSH
T ss_pred HhhCCCCCEEEeCCcc
Confidence 6789999999877555
|
This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C. |
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.8e-07 Score=98.99 Aligned_cols=154 Identities=17% Similarity=0.152 Sum_probs=97.7
Q ss_pred CCceEEEEEEecCCccccCCc-cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCC---CCCC---CCCC
Q psy15208 13 SVGILHCAINFPSSIKLLKLK-GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVG---ASSG---TYDS 85 (1027)
Q Consensus 13 ~dG~I~~~l~~P~~~~~~~~~-pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG---~S~g---~~~~ 85 (1027)
.+.++.+.+|.|++..+.... |.|||+||.++. |+ ++ .. .++ .|...++.+.|-.+ .++. -+.+
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~-g~-dn--~~----~l~-sg~gaiawa~pedqcfVlAPQy~~if~d 240 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQG-GS-DN--DK----VLS-SGIGAIAWAGPEDQCFVLAPQYNPIFAD 240 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCC-Cc-hh--hh----hhh-cCccceeeecccCceEEEcccccccccc
Confidence 344899999999764434455 999999997653 22 21 11 121 13333444444333 1111 0000
Q ss_pred c----cchHHHHH-HHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC-cCCCCCC-CCcE
Q psy15208 86 G----NGETDDME-ILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK-KWLIPEV-PKNT 156 (1027)
Q Consensus 86 ~----~~~~~Dv~-avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-~~~l~~i-~~Pv 156 (1027)
. ........ .+.+.+...+. ..+++++|.|+||..++.++.++|+ .+++.+++++... ...++.+ +.|+
T Consensus 241 ~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd--fFAaa~~iaG~~d~v~lv~~lk~~pi 318 (387)
T COG4099 241 SEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD--FFAAAVPIAGGGDRVYLVRTLKKAPI 318 (387)
T ss_pred cccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch--hhheeeeecCCCchhhhhhhhccCce
Confidence 0 11222222 23335555554 3479999999999999999999999 7899999987765 3344444 4899
Q ss_pred EEEEeCCCCCCChHHHHhhhC
Q psy15208 157 IIIHGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 157 LiIhG~~D~iVP~~~~~~l~~ 177 (1027)
-++|+.+|.++|.++++-...
T Consensus 319 Wvfhs~dDkv~Pv~nSrv~y~ 339 (387)
T COG4099 319 WVFHSSDDKVIPVSNSRVLYE 339 (387)
T ss_pred EEEEecCCCccccCcceeehH
Confidence 999999999999998874443
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.2e-07 Score=109.18 Aligned_cols=92 Identities=22% Similarity=0.289 Sum_probs=79.0
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcC----------------------------H
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT----------------------------M 859 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~----------------------------~ 859 (1027)
..+.+|+|+|+|.+|+..++.++.+|++|+++|.++.++.++...|.+.+. +
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~ 241 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELF 241 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999899888887522 2
Q ss_pred HHHhccCCEEEecC---CC--cccCcHHHHhcCCCCeEEEEecCC
Q psy15208 860 EYAKKYGDIFVTCT---GN--YHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 860 ~e~l~~aDvvi~at---G~--~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.+.++++||+|+|. |. +.++++++++.||+|+++++++.-
T Consensus 242 ~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d 286 (511)
T TIGR00561 242 AAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE 286 (511)
T ss_pred HHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence 23456799999988 54 458999999999999999999764
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >KOG2281|consensus | Back alignment and domain information |
|---|
Probab=98.52 E-value=6.7e-07 Score=104.99 Aligned_cols=168 Identities=18% Similarity=0.262 Sum_probs=119.6
Q ss_pred EEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCC---CCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 6 KFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGG---TMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 6 ~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gG---s~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
+-+.++++.| ++|+.+|.|.+.+..++.|+|+++-|+++--- ++....+. -...|++.||.|+.+|-||.-...-
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~yl-R~~~LaslGy~Vv~IDnRGS~hRGl 692 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYL-RFCRLASLGYVVVFIDNRGSAHRGL 692 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehh-hhhhhhhcceEEEEEcCCCccccch
Confidence 3456677666 89999999987655677999999999763211 11111111 1456888999999999999876653
Q ss_pred CC------CCccchHHHHHHHHHHHHHhCC---CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-----
Q psy15208 82 TY------DSGNGETDDMEILLRYIQKKYP---YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW----- 147 (1027)
Q Consensus 82 ~~------~~~~~~~~Dv~avl~~L~~~~~---~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~----- 147 (1027)
.+ ....-.++|-...+++|..+++ -+++.+-|+|+||.++++...++|+ -++..|+-+|. ..|
T Consensus 693 kFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~--IfrvAIAGapV-T~W~~YDT 769 (867)
T KOG2281|consen 693 KFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPN--IFRVAIAGAPV-TDWRLYDT 769 (867)
T ss_pred hhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcc--eeeEEeccCcc-eeeeeecc
Confidence 22 2344568888888999988763 4579999999999999999999998 34555555543 333
Q ss_pred ---------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhC
Q psy15208 148 ---------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 148 ---------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~ 177 (1027)
.++.-+...|++||--|+-|.+.+..++..
T Consensus 770 gYTERYMg~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs 826 (867)
T KOG2281|consen 770 GYTERYMGYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVS 826 (867)
T ss_pred cchhhhcCCCccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHH
Confidence 023334558999999999999988765543
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.50 E-value=3.9e-07 Score=105.57 Aligned_cols=92 Identities=24% Similarity=0.277 Sum_probs=75.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh-hcCcEE-------cCHHHHhccCCEEEecC---CC-
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA-MEGFLV-------VTMEYAKKYGDIFVTCT---GN- 875 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-~~G~~v-------~~~~e~l~~aDvvi~at---G~- 875 (1027)
+.+++|+|+|+|.+|+.+++.|+.+|++|+++|+++.+..++. ..|..+ ..+.+.+.++|+||+|+ |.
T Consensus 165 l~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~ 244 (370)
T TIGR00518 165 VEPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAK 244 (370)
T ss_pred CCCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCC
Confidence 4678899999999999999999999999999999987766543 334321 23566778999999987 43
Q ss_pred -cccCcHHHHhcCCCCeEEEEecCC
Q psy15208 876 -YHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 876 -~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+.+++++.++.||+++++++++..
T Consensus 245 ~p~lit~~~l~~mk~g~vIvDva~d 269 (370)
T TIGR00518 245 APKLVSNSLVAQMKPGAVIVDVAID 269 (370)
T ss_pred CCcCcCHHHHhcCCCCCEEEEEecC
Confidence 467899999999999999999864
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >KOG3043|consensus | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.8e-07 Score=95.33 Aligned_cols=123 Identities=21% Similarity=0.266 Sum_probs=97.1
Q ss_pred HHHHHHHHHhCCcEEEEEcC-CCCCCCCCCC----------CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHH
Q psy15208 54 VQTLVRVMLSLGYISIRMNF-RGVGASSGTY----------DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQA 122 (1027)
Q Consensus 54 ~~~la~~La~~Gy~Vla~Dl-rGhG~S~g~~----------~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl 122 (1027)
.+..+..++.+||.|+.||+ +|--.|+... .+......|+..++++++++.+..++.++|+||||.++.
T Consensus 56 ~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv 135 (242)
T KOG3043|consen 56 TREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVV 135 (242)
T ss_pred HHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEE
Confidence 56789999999999999997 5522233210 123446789999999999887788999999999999999
Q ss_pred HHHHhcCCcCCccEEEEEccCC-CcCCCCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 123 KLQKRLDKEISIKILILISVAV-KKWLIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 123 ~~A~~~p~~~~V~gLVli~p~~-~~~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
.+....|+ +.+.+..-|.. ..-....+++|+|++.++.|+++|+.....|.+.+
T Consensus 136 ~~~~~~~~---f~a~v~~hps~~d~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~l 190 (242)
T KOG3043|consen 136 TLSAKDPE---FDAGVSFHPSFVDSADIANVKAPILFLFAELDEDVPPKDVKAWEEKL 190 (242)
T ss_pred Eeeccchh---heeeeEecCCcCChhHHhcCCCCEEEEeecccccCCHHHHHHHHHHH
Confidence 88888775 67777666554 34457788999999999999999999988877654
|
|
| >TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.3e-07 Score=106.63 Aligned_cols=147 Identities=14% Similarity=0.088 Sum_probs=96.2
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcEEcCHHH-HhccCCEEEecCCCcccCcHHHHh
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFLVVTMEY-AKKYGDIFVTCTGNYHVITHDHMR 885 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~v~~~~e-~l~~aDvvi~atG~~~vi~~~~~~ 885 (1027)
..|++|+|+|.|.||..+++.|+.+|++ |+++|.++.|+..|.... +.+..+ .-...|++|+|+|+...+. ..++
T Consensus 143 ~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~~--~i~~~~~~~~g~Dvvid~~G~~~~~~-~~~~ 219 (308)
T TIGR01202 143 VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGYE--VLDPEKDPRRDYRAIYDASGDPSLID-TLVR 219 (308)
T ss_pred cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhcc--ccChhhccCCCCCEEEECCCCHHHHH-HHHH
Confidence 3688999999999999999999999997 667788887776665443 233222 2235799999999876444 4599
Q ss_pred cCCCCeEEEEecCCCcc--cchhhhhccceeccccceeeeecCC-CcEEEEecCCccccccCCCCCCcceEehhhHhHHH
Q psy15208 886 DMKDQAIVCNIGHFDNE--IEVEKLKKYKWENIKPQVDHIIFPD-GKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTL 962 (1027)
Q Consensus 886 ~mk~gailvNvG~~d~e--id~~~l~~~~~~~~~~~v~~y~~~d-g~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~~q~l 962 (1027)
.|+++|+++.+|..... +++..+...+..... ...+...+ .+.+.++++|++ .|..+++..|.+..+
T Consensus 220 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~l~~~g~i--------~~~~~it~~~~l~~~ 289 (308)
T TIGR01202 220 RLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRI--AAEWQPGDLHAVRELIESGAL--------SLDGLITHQRPASDA 289 (308)
T ss_pred hhhcCcEEEEEeecCCCcccccchhhhcceEEEE--ecccchhHHHHHHHHHHcCCC--------ChhhccceeecHHHH
Confidence 99999999999986433 332222111111111 00111111 356667777777 455566777777766
Q ss_pred HHHHH
Q psy15208 963 AQIEL 967 (1027)
Q Consensus 963 a~~~l 967 (1027)
...+-
T Consensus 290 ~~A~~ 294 (308)
T TIGR01202 290 AEAYM 294 (308)
T ss_pred HHHHH
Confidence 66553
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.47 E-value=6.7e-07 Score=97.87 Aligned_cols=156 Identities=12% Similarity=0.097 Sum_probs=103.4
Q ss_pred EecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcC-CCCC------CCCCC
Q psy15208 10 INGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNF-RGVG------ASSGT 82 (1027)
Q Consensus 10 I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~Dl-rGhG------~S~g~ 82 (1027)
+........+++|.|.+.+ ...|+||++||..+++..+.+ ...|-+...+.||-|+.||- +++- .+.+.
T Consensus 40 ~~~~g~~r~y~l~vP~g~~--~~apLvv~LHG~~~sgag~~~--~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p 115 (312)
T COG3509 40 FDVNGLKRSYRLYVPPGLP--SGAPLVVVLHGSGGSGAGQLH--GTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGP 115 (312)
T ss_pred cccCCCccceEEEcCCCCC--CCCCEEEEEecCCCChHHhhc--ccchhhhhcccCcEEECcCccccccCCCcccccCCc
Confidence 4444446788889998742 345899999997654443332 12233333457999999964 3222 12111
Q ss_pred C--CCccchHHHHHHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC--CCCCCCCcE
Q psy15208 83 Y--DSGNGETDDMEILLRYIQKKYPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW--LIPEVPKNT 156 (1027)
Q Consensus 83 ~--~~~~~~~~Dv~avl~~L~~~~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~--~l~~i~~Pv 156 (1027)
. ......+.++.++++.+..++..+ +|++.|.|-||.++..+++.+|+ .+.++..++...+.- ....-..++
T Consensus 116 ~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~--~faa~A~VAg~~~~~~a~~~~rp~~~ 193 (312)
T COG3509 116 ADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPD--IFAAIAPVAGLLALGVACTPPRPVSV 193 (312)
T ss_pred ccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcc--cccceeeeecccCCCcccCCCCchhH
Confidence 1 123457888899999999988776 69999999999999999999999 677777666544211 112223567
Q ss_pred EEEEeCCCCCCChHH
Q psy15208 157 IIIHGELDEIIPLKD 171 (1027)
Q Consensus 157 LiIhG~~D~iVP~~~ 171 (1027)
+.+||..|+..|+..
T Consensus 194 m~~~G~~Dp~~p~~g 208 (312)
T COG3509 194 MAFHGTADPLNPYHG 208 (312)
T ss_pred HHhcCCCCCCCCCCC
Confidence 788888888776643
|
|
| >KOG2624|consensus | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.8e-06 Score=100.18 Aligned_cols=137 Identities=22% Similarity=0.163 Sum_probs=104.3
Q ss_pred ceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCC-hHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMD-NKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~-~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
+.+.+.+.|.||.+.+....|... .++|+|++.||.-..+.++- +..-..++=.|+++||+|+.-+.||.-.|.++
T Consensus 47 ~~E~h~V~T~DgYiL~lhRIp~~~---~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h 123 (403)
T KOG2624|consen 47 PVEEHEVTTEDGYILTLHRIPRGK---KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKH 123 (403)
T ss_pred ceEEEEEEccCCeEEEEeeecCCC---CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhh
Confidence 467789999999877777777762 67999999999744333221 11224577789999999999999998887742
Q ss_pred C---C---------Cccc-hHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCC-cCCccEEEEEccC
Q psy15208 83 Y---D---------SGNG-ETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDK-EISIKILILISVA 143 (1027)
Q Consensus 83 ~---~---------~~~~-~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~-~~~V~gLVli~p~ 143 (1027)
. + ++.+ -..|+-+.++++...-+..+++.+|||+|+.+........|+ ..+|+..++++|+
T Consensus 124 ~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~ 198 (403)
T KOG2624|consen 124 KKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPA 198 (403)
T ss_pred cccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecch
Confidence 1 1 1222 467899999999887677789999999999999999988865 2368888998885
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.8e-06 Score=97.38 Aligned_cols=121 Identities=17% Similarity=0.134 Sum_probs=89.1
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEI 95 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~a 95 (1027)
.+.+..|.|.. ......|+||++||+++..++.+. ....+...+...|+.|+.+|||---+- .+....+|+.+
T Consensus 63 ~~~~~~y~p~~-~~~~~~p~vly~HGGg~~~g~~~~-~~~~~~~~~~~~g~~vv~vdYrlaPe~-----~~p~~~~d~~~ 135 (312)
T COG0657 63 GVPVRVYRPDR-KAAATAPVVLYLHGGGWVLGSLRT-HDALVARLAAAAGAVVVSVDYRLAPEH-----PFPAALEDAYA 135 (312)
T ss_pred ceeEEEECCCC-CCCCCCcEEEEEeCCeeeecChhh-hHHHHHHHHHHcCCEEEecCCCCCCCC-----CCCchHHHHHH
Confidence 37788888821 112458999999999887777654 234566667778999999999843222 34457899999
Q ss_pred HHHHHHHhC-----CCCcEEEEEechhHHHHHHHHHhcCCc--CCccEEEEEccC
Q psy15208 96 LLRYIQKKY-----PYLPIILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVA 143 (1027)
Q Consensus 96 vl~~L~~~~-----~~~pviLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~ 143 (1027)
.+.|+..+. +..+++++|+|.||.+++.++....++ ....+.++++|.
T Consensus 136 a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 136 AYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred HHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 999998652 245799999999999999998775532 346888888875
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.1e-06 Score=99.88 Aligned_cols=129 Identities=19% Similarity=0.124 Sum_probs=79.2
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCCh----------------HHHHHHHHHHHhCCcE
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDN----------------KVVQTLVRVMLSLGYI 67 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~----------------~~~~~la~~La~~Gy~ 67 (1027)
.+++.|.+..+ ++.+++..|++. .++.|.||++||.+ +..+. ..-..++.+|+++||.
T Consensus 88 ~EKv~f~~~p~~~vpaylLvPd~~--~~p~PAVL~lHgHg---~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYV 162 (390)
T PF12715_consen 88 REKVEFNTTPGSRVPAYLLVPDGA--KGPFPAVLCLHGHG---GGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYV 162 (390)
T ss_dssp EEEEEE--STTB-EEEEEEEETT----S-EEEEEEE--TT-----HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSE
T ss_pred EEEEEEEccCCeeEEEEEEecCCC--CCCCCEEEEeCCCC---CCcccccCCcccccccchhhccccccHHHHHHhCCCE
Confidence 45577776666 899999999873 36789999999964 22210 0012468899999999
Q ss_pred EEEEcCCCCCCCCCCCC-------Ccc---------------chHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHH
Q psy15208 68 SIRMNFRGVGASSGTYD-------SGN---------------GETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAK 123 (1027)
Q Consensus 68 Vla~DlrGhG~S~g~~~-------~~~---------------~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~ 123 (1027)
|+++|.+|.|+....-. +.. ....|...+++||..+.. .++|.++|+||||..++.
T Consensus 163 vla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~ 242 (390)
T PF12715_consen 163 VLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWW 242 (390)
T ss_dssp EEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHH
Confidence 99999999998753210 000 124444567778776532 246999999999999999
Q ss_pred HHHhcCCcCCccEEEEEc
Q psy15208 124 LQKRLDKEISIKILILIS 141 (1027)
Q Consensus 124 ~A~~~p~~~~V~gLVli~ 141 (1027)
+++..+ +|++.|..+
T Consensus 243 LaALDd---RIka~v~~~ 257 (390)
T PF12715_consen 243 LAALDD---RIKATVANG 257 (390)
T ss_dssp HHHH-T---T--EEEEES
T ss_pred HHHcch---hhHhHhhhh
Confidence 999865 488877665
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.45 E-value=5.6e-07 Score=94.96 Aligned_cols=113 Identities=19% Similarity=0.249 Sum_probs=79.1
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
.....++-+|| .+.+..|...+ .....++..-+. | .....++.++..++.+||.|+.+|+||.|+|...-
T Consensus 5 a~e~~l~~~DG~~l~~~~~pA~~----~~~g~~~va~a~----G-v~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~ 75 (281)
T COG4757 5 ATEAHLPAPDGYSLPGQRFPADG----KASGRLVVAGAT----G-VGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPAS 75 (281)
T ss_pred ccccccccCCCccCccccccCCC----CCCCcEEecccC----C-cchhHhHHHHHHhhccCceEEEEecccccCCCccc
Confidence 33466888899 67776665443 223233333332 1 12246889999999999999999999999997421
Q ss_pred C-----Cc-cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHH
Q psy15208 84 D-----SG-NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQK 126 (1027)
Q Consensus 84 ~-----~~-~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~ 126 (1027)
. .+ +=-..|+.+.+++++...+..|...+||||||.+.-.+..
T Consensus 76 ~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 76 LSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred cccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc
Confidence 1 11 1235788899999998888889999999999987655543
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.9e-06 Score=106.62 Aligned_cols=85 Identities=14% Similarity=0.226 Sum_probs=71.4
Q ss_pred HHHHHHHhCCcEEEEEcCCCCCCCCCCCCCc-cchHHHHHHHHHHHHHhC----------------CCCcEEEEEechhH
Q psy15208 56 TLVRVMLSLGYISIRMNFRGVGASSGTYDSG-NGETDDMEILLRYIQKKY----------------PYLPIILAGFSFGT 118 (1027)
Q Consensus 56 ~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~-~~~~~Dv~avl~~L~~~~----------------~~~pviLVGhSmGG 118 (1027)
.+.++|+++||.|+.+|.||+|.|.|.+..+ ....+|..++++|+..+. ...+|.++|.|+||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 4678899999999999999999999976443 668899999999998431 13479999999999
Q ss_pred HHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 119 FVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 119 ~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
.+++.+|...|+ .++++|..++
T Consensus 350 ~~~~~aAa~~pp--~LkAIVp~a~ 371 (767)
T PRK05371 350 TLPNAVATTGVE--GLETIIPEAA 371 (767)
T ss_pred HHHHHHHhhCCC--cceEEEeeCC
Confidence 999999998877 5788887754
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=9.2e-07 Score=98.05 Aligned_cols=91 Identities=24% Similarity=0.321 Sum_probs=76.5
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCChh-HHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGDV-GKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~I-G~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.++..-+. ..++.+.||+|+|+|.|.+ |+.+|..|...||+|++++.. .-++.+.+++||+||
T Consensus 141 Tp~aii~lL~-~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~-------------t~~l~~~~~~ADIVV 206 (285)
T PRK14189 141 TPYGVMKMLE-SIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK-------------TRDLAAHTRQADIVV 206 (285)
T ss_pred CHHHHHHHHH-HcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC-------------CCCHHHHhhhCCEEE
Confidence 4555554444 4578899999999999996 999999999999999998542 235778889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.++|.+++++.+ ++|+|++++|+|..
T Consensus 207 ~avG~~~~i~~~---~ik~gavVIDVGin 232 (285)
T PRK14189 207 AAVGKRNVLTAD---MVKPGATVIDVGMN 232 (285)
T ss_pred EcCCCcCccCHH---HcCCCCEEEEcccc
Confidence 999999999974 58999999999975
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.3e-06 Score=96.98 Aligned_cols=92 Identities=25% Similarity=0.388 Sum_probs=77.7
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+++.-+.+ .++.+.||+|+|+|.|. +|+.+|+.|...||+|++++... .++.+.+++||+||
T Consensus 141 Tp~ai~~ll~~-~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t-------------~~l~~~~~~ADIVI 206 (286)
T PRK14175 141 TPLGIMEILKH-ADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS-------------KDMASYLKDADVIV 206 (286)
T ss_pred cHHHHHHHHHH-cCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-------------hhHHHHHhhCCEEE
Confidence 45555555544 47789999999999999 99999999999999999997642 25678889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
.|+|.+++++.++ +|+|++++++|...
T Consensus 207 sAvg~p~~i~~~~---vk~gavVIDvGi~~ 233 (286)
T PRK14175 207 SAVGKPGLVTKDV---VKEGAVIIDVGNTP 233 (286)
T ss_pred ECCCCCcccCHHH---cCCCcEEEEcCCCc
Confidence 9999999999864 79999999999863
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.2e-06 Score=97.64 Aligned_cols=94 Identities=26% Similarity=0.321 Sum_probs=77.7
Q ss_pred hhhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCE
Q psy15208 790 YGCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDI 868 (1027)
Q Consensus 790 ~g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDv 868 (1027)
+.|-.++...+.+ .+..+.||+|+|+|.|. +|+.+|..|...||+|++++... .++.+.++++|+
T Consensus 140 p~T~~gii~~L~~-~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t-------------~~L~~~~~~aDI 205 (283)
T PRK14192 140 SATPAGIMRLLKA-YNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT-------------QNLPELVKQADI 205 (283)
T ss_pred CCcHHHHHHHHHH-cCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc-------------hhHHHHhccCCE
Confidence 4455666665554 57789999999999998 99999999999999999997521 245667789999
Q ss_pred EEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 869 FVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 869 vi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
||+|||.++.++.+ .+|+|++++++|...
T Consensus 206 vI~AtG~~~~v~~~---~lk~gavViDvg~n~ 234 (283)
T PRK14192 206 IVGAVGKPELIKKD---WIKQGAVVVDAGFHP 234 (283)
T ss_pred EEEccCCCCcCCHH---HcCCCCEEEEEEEee
Confidence 99999988888865 489999999999875
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.5e-06 Score=90.20 Aligned_cols=100 Identities=28% Similarity=0.358 Sum_probs=68.4
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhC--CcEEEEEcCCCCCCCC--CCCCCccchHHHHHHHHHHHHHhCCCCc
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL--GYISIRMNFRGVGASS--GTYDSGNGETDDMEILLRYIQKKYPYLP 108 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~--Gy~Vla~DlrGhG~S~--g~~~~~~~~~~Dv~avl~~L~~~~~~~p 108 (1027)
.|.++++||++.. .. .|......+... .|+++.+|+||||.|. .. .....+.++..+++ .....+
T Consensus 21 ~~~i~~~hg~~~~---~~--~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~--~~~~~~~~~~~~~~----~~~~~~ 89 (282)
T COG0596 21 GPPLVLLHGFPGS---SS--VWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGY--SLSAYADDLAALLD----ALGLEK 89 (282)
T ss_pred CCeEEEeCCCCCc---hh--hhHHHHHHhhccccceEEEEecccCCCCCCcccc--cHHHHHHHHHHHHH----HhCCCc
Confidence 4488999997432 22 233322222221 1999999999999997 11 11122444444444 334446
Q ss_pred EEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 109 IILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 109 viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
++++||||||.+++.++.++|+ ++++++++++...
T Consensus 90 ~~l~G~S~Gg~~~~~~~~~~p~--~~~~~v~~~~~~~ 124 (282)
T COG0596 90 VVLVGHSMGGAVALALALRHPD--RVRGLVLIGPAPP 124 (282)
T ss_pred eEEEEecccHHHHHHHHHhcch--hhheeeEecCCCC
Confidence 9999999999999999999998 7999999998764
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.1e-06 Score=91.26 Aligned_cols=87 Identities=28% Similarity=0.353 Sum_probs=71.8
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc-CcEEcCHHHHhc-cCCEEEecCCCcccCcHH
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME-GFLVVTMEYAKK-YGDIFVTCTGNYHVITHD 882 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~-G~~v~~~~e~l~-~aDvvi~atG~~~vi~~~ 882 (1027)
+..+.||+++|+|+|.+|+.+|+.|..+|++|+++|.++.+..+.... |...++.++.+. ++|+++.|+. .++++.+
T Consensus 23 ~~~l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~l~~~~~Dv~vp~A~-~~~I~~~ 101 (200)
T cd01075 23 TDSLEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEEIYSVDADVFAPCAL-GGVINDD 101 (200)
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchhhccccCCEEEeccc-ccccCHH
Confidence 557899999999999999999999999999999999998766654443 777777777765 7999997764 3589999
Q ss_pred HHhcCCCCeE
Q psy15208 883 HMRDMKDQAI 892 (1027)
Q Consensus 883 ~~~~mk~gai 892 (1027)
.++.|+...+
T Consensus 102 ~~~~l~~~~v 111 (200)
T cd01075 102 TIPQLKAKAI 111 (200)
T ss_pred HHHHcCCCEE
Confidence 9999985543
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=98.37 E-value=7.1e-07 Score=103.66 Aligned_cols=167 Identities=17% Similarity=0.168 Sum_probs=111.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-------HHHhc-----cCCEEEecC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-------EYAKK-----YGDIFVTCT 873 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-------~e~l~-----~aDvvi~at 873 (1027)
..|++|+|.|.|.||..+++.++.+|+ +|++++.++.+...|...|++ +.+. .+.+. ..|+|++++
T Consensus 192 ~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~ 271 (378)
T PLN02827 192 SKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECV 271 (378)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECC
Confidence 579999999999999999999999999 588899888888888888885 3321 12121 479999999
Q ss_pred CCcccCcHHHHhcCCCC-eEEEEecCCCc--ccchh-hhhccceeccccceeeeec-CC-CcEEEEecCCccccccCCCC
Q psy15208 874 GNYHVITHDHMRDMKDQ-AIVCNIGHFDN--EIEVE-KLKKYKWENIKPQVDHIIF-PD-GKKIILLAEGRLVNLGCGTG 947 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~g-ailvNvG~~d~--eid~~-~l~~~~~~~~~~~v~~y~~-~d-g~~i~LLa~GrlvNl~~~~G 947 (1027)
|....+. ..++.+++| |+++.+|.... +++.. .+...+..........+.. .+ .+.+.++++|++
T Consensus 272 G~~~~~~-~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i-------- 342 (378)
T PLN02827 272 GDTGIAT-TALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEI-------- 342 (378)
T ss_pred CChHHHH-HHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCC--------
Confidence 9876454 458999998 99999998632 23221 1111111111111111110 11 245567777877
Q ss_pred CCcceEehhhHhHHHHHHHHhhcCCCCCCcEEeCCh
Q psy15208 948 HPSYVMSSSFANQTLAQIELFNNTSNYPIGIYTLPK 983 (1027)
Q Consensus 948 ~P~~vmd~sf~~q~la~~~l~~~~~~~~~gv~~lp~ 983 (1027)
.|..+++..|.+......+-.-..++.-+.|+.+|+
T Consensus 343 ~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~~ 378 (378)
T PLN02827 343 MIDEFITHNLSFDEINKAFELMREGKCLRCVIHMPK 378 (378)
T ss_pred ChHHheEEEecHHHHHHHHHHHHCCCceEEEEEecC
Confidence 566678888888877766655333344588888885
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.2e-06 Score=92.37 Aligned_cols=102 Identities=20% Similarity=0.229 Sum_probs=76.0
Q ss_pred EEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHh-----CCCCcE
Q psy15208 36 VLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKK-----YPYLPI 109 (1027)
Q Consensus 36 VVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~-----~~~~pv 109 (1027)
||++||+++..++.+. ...++..+++ .|+.|+.+|||-. +. ..+....+|+.++++|+.+. .+..++
T Consensus 1 v~~~HGGg~~~g~~~~--~~~~~~~la~~~g~~v~~~~Yrl~---p~--~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i 73 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES--HWPFAARLAAERGFVVVSIDYRLA---PE--APFPAALEDVKAAYRWLLKNADKLGIDPERI 73 (211)
T ss_dssp EEEE--STTTSCGTTT--HHHHHHHHHHHHTSEEEEEE---T---TT--SSTTHHHHHHHHHHHHHHHTHHHHTEEEEEE
T ss_pred CEEECCcccccCChHH--HHHHHHHHHhhccEEEEEeecccc---cc--ccccccccccccceeeeccccccccccccce
Confidence 6999999988777664 3556666665 8999999999943 22 24557899999999999886 555689
Q ss_pred EEEEechhHHHHHHHHHhcCCc--CCccEEEEEccCC
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVAV 144 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~~ 144 (1027)
+|+|+|.||.+++.++.+..+. ..++++++++|..
T Consensus 74 ~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred EEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 9999999999999999865442 3489999999854
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >KOG2100|consensus | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.7e-06 Score=105.44 Aligned_cols=162 Identities=15% Similarity=0.238 Sum_probs=113.8
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHH-HHhCCcEEEEEcCCCCCCCCCCC-----CC-ccc
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRV-MLSLGYISIRMNFRGVGASSGTY-----DS-GNG 88 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~-La~~Gy~Vla~DlrGhG~S~g~~-----~~-~~~ 88 (1027)
...+.+..|++-......|++|.+||++... ......-..|... +...|+.|+.+|.||.|.....+ .. +..
T Consensus 509 ~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq-~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ 587 (755)
T KOG2100|consen 509 TANAILILPPNFDPSKKYPLLVVVYGGPGSQ-SVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDV 587 (755)
T ss_pred EEEEEEecCCCCCCCCCCCEEEEecCCCCcc-eeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCc
Confidence 6778888897644456789999999976411 1111111123333 56689999999999998876532 11 224
Q ss_pred hHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc----------C---------
Q psy15208 89 ETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK----------W--------- 147 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~----------~--------- 147 (1027)
.+.|...+++++.+.. +..++.++|+|.||.+++.++...|+. -+++.++++|.... +
T Consensus 588 ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~-~fkcgvavaPVtd~~~yds~~terymg~p~~~~~ 666 (755)
T KOG2100|consen 588 EVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGD-VFKCGVAVAPVTDWLYYDSTYTERYMGLPSENDK 666 (755)
T ss_pred chHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCc-eEEEEEEecceeeeeeecccccHhhcCCCccccc
Confidence 6788887777777653 334699999999999999999998852 35666888885331 1
Q ss_pred ---------CCCCCCCcE-EEEEeCCCCCCChHHHHhhhCCC
Q psy15208 148 ---------LIPEVPKNT-IIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 148 ---------~l~~i~~Pv-LiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
.+..++.|. |++||+.|.-|+.+++..+.+.+
T Consensus 667 ~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL 708 (755)
T KOG2100|consen 667 GYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKAL 708 (755)
T ss_pred hhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHH
Confidence 133455565 99999999999999988777654
|
|
| >KOG1553|consensus | Back alignment and domain information |
|---|
Probab=98.33 E-value=8.1e-07 Score=97.80 Aligned_cols=154 Identities=18% Similarity=0.209 Sum_probs=107.9
Q ss_pred EEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC
Q psy15208 6 KFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD 84 (1027)
Q Consensus 6 ~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~ 84 (1027)
++..+.+.|| +|.+.+......+.+..+..|+++.|. .|..+- .....-++.||.|+.+++||++.|.+.+
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGN---AGFYEv----G~m~tP~~lgYsvLGwNhPGFagSTG~P- 286 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGN---AGFYEV----GVMNTPAQLGYSVLGWNHPGFAGSTGLP- 286 (517)
T ss_pred eEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCC---ccceEe----eeecChHHhCceeeccCCCCccccCCCC-
Confidence 4567888887 566544432211123446788888885 444331 2333344679999999999999999864
Q ss_pred CccchHHHHHHHHHHHHHh--CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC-----------cC----
Q psy15208 85 SGNGETDDMEILLRYIQKK--YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK-----------KW---- 147 (1027)
Q Consensus 85 ~~~~~~~Dv~avl~~L~~~--~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-----------~~---- 147 (1027)
...+..+.+.+++++..+. ++...++|.|+|.||..+.++|..||+ |+++|+.+..-. .|
T Consensus 287 ~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd---VkavvLDAtFDDllpLAl~rMP~~~~giV 363 (517)
T KOG1553|consen 287 YPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD---VKAVVLDATFDDLLPLALFRMPTFFSGIV 363 (517)
T ss_pred CcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC---ceEEEeecchhhhhhHHhhhchHHHHHHH
Confidence 2233456666777777664 455569999999999999999999998 999999987422 11
Q ss_pred --------------CCCCCCCcEEEEEeCCCCCCChH
Q psy15208 148 --------------LIPEVPKNTIIIHGELDEIIPLK 170 (1027)
Q Consensus 148 --------------~l~~i~~PvLiIhG~~D~iVP~~ 170 (1027)
++.+.+.|+.+|.-.+|+++.-.
T Consensus 364 ~~aiRnh~NLnnaell~ry~GPi~lIRRt~dEIitt~ 400 (517)
T KOG1553|consen 364 EHAIRNHMNLNNAELLARYKGPIRLIRRTQDEIITTA 400 (517)
T ss_pred HHHHHHhcccchHHHHHhhcCchhHhhhhhHhhhhcc
Confidence 25567889999999999886543
|
|
| >COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.3e-06 Score=97.35 Aligned_cols=179 Identities=17% Similarity=0.214 Sum_probs=124.0
Q ss_pred chhhhh-hHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHHHH---
Q psy15208 789 LYGCRE-SLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTMEYA--- 862 (1027)
Q Consensus 789 ~~g~~~-s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~e~--- 862 (1027)
..||+- .-+-+.....+ .-.|.+|+|+|+|.||.++.+.|+..|| +++.+|+++.+...|...|++ +++..+.
T Consensus 165 llGCgV~TG~Gav~nta~-v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~~~~v 243 (366)
T COG1062 165 LLGCGVTTGIGAVVNTAK-VEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVDDV 243 (366)
T ss_pred EEeeeeccChHHhhhccc-CCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchhhhhH
Confidence 355553 22333344333 4689999999999999999999999999 799999999999999999986 3332211
Q ss_pred ---h----c-cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC--Ccccchhhhhccceecc-----ccceeeeecCC
Q psy15208 863 ---K----K-YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF--DNEIEVEKLKKYKWENI-----KPQVDHIIFPD 927 (1027)
Q Consensus 863 ---l----~-~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~--d~eid~~~l~~~~~~~~-----~~~v~~y~~~d 927 (1027)
+ . .+|..|+|+|+.+++. +.|+...+++..+-+|.. ..+|++....-...+.+ .....++.+|
T Consensus 244 v~~i~~~T~gG~d~~~e~~G~~~~~~-~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~~diP- 321 (366)
T COG1062 244 VEAIVELTDGGADYAFECVGNVEVMR-QALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPRSDIP- 321 (366)
T ss_pred HHHHHHhcCCCCCEEEEccCCHHHHH-HHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeecCCccccchh-
Confidence 1 1 4899999999999655 558999889999999987 46777665443211222 2222334444
Q ss_pred CcEEEEecCCccccccCCCCCCcceEehhhHhHHHHHHHHhhcCCCCCCcEE
Q psy15208 928 GKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIY 979 (1027)
Q Consensus 928 g~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~~q~la~~~l~~~~~~~~~gv~ 979 (1027)
+-+.+--+||+ ...+.+++.+.+..+-+.+-.-+.++....|+
T Consensus 322 -~lv~~y~~Gkl--------~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi 364 (366)
T COG1062 322 -RLVDLYMAGKL--------PLDRLVTHTIPLEDINEAFDLMHEGKSIRSVI 364 (366)
T ss_pred -HHHHHHHcCCC--------chhHHhhccccHHHHHHHHHHHhCCceeeEEe
Confidence 55566667777 55667777777777666666655555555554
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.2e-06 Score=86.48 Aligned_cols=92 Identities=24% Similarity=0.309 Sum_probs=68.3
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-++++.-+.+ .+..+.||+|+|+|.+. +|+-++..|...||.|++++..- .++++.+++||+|
T Consensus 18 cTp~aii~lL~~-~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T-------------~~l~~~~~~ADIV 83 (160)
T PF02882_consen 18 CTPLAIIELLEY-YGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT-------------KNLQEITRRADIV 83 (160)
T ss_dssp HHHHHHHHHHHH-TT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS-------------SSHHHHHTTSSEE
T ss_pred CCHHHHHHHHHh-cCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC-------------CcccceeeeccEE
Confidence 355666665554 57789999999999998 99999999999999999996643 3567788999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.++|.++++..+ .+|+|++++++|..
T Consensus 84 Vsa~G~~~~i~~~---~ik~gavVIDvG~~ 110 (160)
T PF02882_consen 84 VSAVGKPNLIKAD---WIKPGAVVIDVGIN 110 (160)
T ss_dssp EE-SSSTT-B-GG---GS-TTEEEEE--CE
T ss_pred eeeeccccccccc---cccCCcEEEecCCc
Confidence 9999999998866 57999999999985
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.30 E-value=6.3e-06 Score=84.26 Aligned_cols=136 Identities=14% Similarity=0.106 Sum_probs=89.0
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAG 113 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVG 113 (1027)
.-++++||+. +|..+++...|-+.|.. +-.+++. ....+..+.++..+.+.+. .. ..+++||+
T Consensus 3 ~~~lIVpG~~---~Sg~~HWq~~we~~l~~----a~rveq~-----~w~~P~~~dWi~~l~~~v~---a~--~~~~vlVA 65 (181)
T COG3545 3 TDVLIVPGYG---GSGPNHWQSRWESALPN----ARRVEQD-----DWEAPVLDDWIARLEKEVN---AA--EGPVVLVA 65 (181)
T ss_pred ceEEEecCCC---CCChhHHHHHHHhhCcc----chhcccC-----CCCCCCHHHHHHHHHHHHh---cc--CCCeEEEE
Confidence 3579999973 34344344444444432 3333332 1222332333333333222 22 33699999
Q ss_pred echhHHHHHHHHHhcCCcCCccEEEEEccCCCc--------------CCCCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 114 FSFGTFVQAKLQKRLDKEISIKILILISVAVKK--------------WLIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 114 hSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~--------------~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
||+|+.+++.++.+... .|+|+++++|+-.. ....+...|.++++..+|++++++.+..+++..
T Consensus 66 HSLGc~~v~h~~~~~~~--~V~GalLVAppd~~~~~~~~~~~~tf~~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w 143 (181)
T COG3545 66 HSLGCATVAHWAEHIQR--QVAGALLVAPPDVSRPEIRPKHLMTFDPIPREPLPFPSVVVASRNDPYVSYEHAEDLANAW 143 (181)
T ss_pred ecccHHHHHHHHHhhhh--ccceEEEecCCCccccccchhhccccCCCccccCCCceeEEEecCCCCCCHHHHHHHHHhc
Confidence 99999999999998766 79999999987421 124456689999999999999999999998887
Q ss_pred CCceEeecc
Q psy15208 180 DIPVVVIPE 188 (1027)
Q Consensus 180 ~~~~L~t~E 188 (1027)
...++...+
T Consensus 144 gs~lv~~g~ 152 (181)
T COG3545 144 GSALVDVGE 152 (181)
T ss_pred cHhheeccc
Confidence 765554443
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=98.28 E-value=5.2e-06 Score=83.20 Aligned_cols=92 Identities=15% Similarity=0.213 Sum_probs=76.9
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-++...-+.+ .++.+.||+|+|+|-+. +|+.+|..|...|+.|++++.+- .++++.+++||+||
T Consensus 11 t~~a~~~ll~~-~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t-------------~~l~~~v~~ADIVv 76 (140)
T cd05212 11 VAKAVKELLNK-EGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT-------------IQLQSKVHDADVVV 76 (140)
T ss_pred HHHHHHHHHHH-cCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC-------------cCHHHHHhhCCEEE
Confidence 44555554444 47889999999999999 99999999999999999997643 25677889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
+++|.+++++.+ ++|+|++++++|..-
T Consensus 77 sAtg~~~~i~~~---~ikpGa~Vidvg~~~ 103 (140)
T cd05212 77 VGSPKPEKVPTE---WIKPGATVINCSPTK 103 (140)
T ss_pred EecCCCCccCHH---HcCCCCEEEEcCCCc
Confidence 999999998876 489999999998753
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >KOG4627|consensus | Back alignment and domain information |
|---|
Probab=98.27 E-value=3.3e-06 Score=87.65 Aligned_cols=156 Identities=15% Similarity=0.140 Sum_probs=113.0
Q ss_pred CCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHH
Q psy15208 13 SVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDD 92 (1027)
Q Consensus 13 ~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~D 92 (1027)
++|+..+-+|.|.. ..++.||+||+-|..|+.. .....+.-+.++||+|..+++ +.++.. .+......+
T Consensus 52 ~~g~q~VDIwg~~~-----~~klfIfIHGGYW~~g~rk--~clsiv~~a~~~gY~vasvgY---~l~~q~-htL~qt~~~ 120 (270)
T KOG4627|consen 52 EGGRQLVDIWGSTN-----QAKLFIFIHGGYWQEGDRK--MCLSIVGPAVRRGYRVASVGY---NLCPQV-HTLEQTMTQ 120 (270)
T ss_pred CCCceEEEEecCCC-----CccEEEEEecchhhcCchh--cccchhhhhhhcCeEEEEecc---CcCccc-ccHHHHHHH
Confidence 44567778888865 5789999999877666543 234556666778999999866 455433 245566788
Q ss_pred HHHHHHHHHHhCCCCc-EEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC--------------------------C
Q psy15208 93 MEILLRYIQKKYPYLP-IILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV--------------------------K 145 (1027)
Q Consensus 93 v~avl~~L~~~~~~~p-viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~--------------------------~ 145 (1027)
+...++|+...++..+ +.+-|||.|+.+++.+..+..+ +++.|+++.++.- .
T Consensus 121 ~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~-prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae~~Scd 199 (270)
T KOG4627|consen 121 FTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRS-PRIWGLILLCGVYDLRELSNTESGNDLGLTERNAESVSCD 199 (270)
T ss_pred HHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcC-chHHHHHHHhhHhhHHHHhCCccccccCcccchhhhcCcc
Confidence 8888888888776544 7777999999999888776433 3799999888631 1
Q ss_pred cCCCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 146 KWLIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 146 ~~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
-|.+..++.|++++.++.|.-.-.++.+.++...+
T Consensus 200 l~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~ 234 (270)
T KOG4627|consen 200 LWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLR 234 (270)
T ss_pred HHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhh
Confidence 23466788999999999998777777777766544
|
|
| >PRK05225 ketol-acid reductoisomerase; Validated | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.1e-06 Score=101.86 Aligned_cols=94 Identities=23% Similarity=0.223 Sum_probs=78.2
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEE------EEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCC--ccc
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVW------IIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGN--YHV 878 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~Vi------V~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~--~~v 878 (1027)
.|.||+|+|+|||.+|+..|.-++..|.+|+ ++|.+......|..+|+.+.+++++++.||+|+.+++. .+.
T Consensus 33 ~LkgKtIaIIGyGSqG~AqAlNLrdSGvnVvvglr~~~id~~~~s~~kA~~dGF~v~~~~Ea~~~ADvVviLlPDt~q~~ 112 (487)
T PRK05225 33 YLKGKKIVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHSD 112 (487)
T ss_pred HhCCCEEEEEccCHHHHHHhCCCccccceeEEeccccccccccchHHHHHhcCCccCCHHHHHHhCCEEEEcCChHHHHH
Confidence 4899999999999999999999999999988 44444445556777899999999999999999987653 345
Q ss_pred CcHHHHhcCCCCeEEEEecCCC
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~d 900 (1027)
+..+.+..||+|+.|...-.|+
T Consensus 113 v~~~i~p~LK~Ga~L~fsHGFn 134 (487)
T PRK05225 113 VVRAVQPLMKQGAALGYSHGFN 134 (487)
T ss_pred HHHHHHhhCCCCCEEEecCCce
Confidence 6678899999999998876664
|
|
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.1e-06 Score=98.79 Aligned_cols=92 Identities=18% Similarity=0.159 Sum_probs=74.8
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-----HHH----h--ccCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-----EYA----K--KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-----~e~----l--~~aDvvi~atG 874 (1027)
..|++|+|.|.|.||..+++.++.+|+ +|++++.++.+...+...|.+ +.+. .+. . ...|+|++++|
T Consensus 175 ~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~g 254 (358)
T TIGR03451 175 KRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVG 254 (358)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECCC
Confidence 579999999999999999999999999 599999999888888888875 3321 111 1 14799999999
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
+...+. ..++.++++|+++.+|...
T Consensus 255 ~~~~~~-~~~~~~~~~G~iv~~G~~~ 279 (358)
T TIGR03451 255 RPETYK-QAFYARDLAGTVVLVGVPT 279 (358)
T ss_pred CHHHHH-HHHHHhccCCEEEEECCCC
Confidence 876555 4588999999999999864
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=6e-06 Score=91.57 Aligned_cols=92 Identities=18% Similarity=0.226 Sum_probs=77.3
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.+++.-+.+ .++.+.||+|+|+|.|. +|+.+|..|...||.|++++..- -++.+.+++||||
T Consensus 141 cTp~av~~ll~~-~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T-------------~~l~~~~~~ADIv 206 (285)
T PRK10792 141 CTPRGIMTLLER-YGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT-------------KNLRHHVRNADLL 206 (285)
T ss_pred CCHHHHHHHHHH-cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC-------------CCHHHHHhhCCEE
Confidence 355666655544 47789999999999999 99999999999999999996532 2577888999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|+|.++++..+ .+|+|++++++|.-
T Consensus 207 i~avG~p~~v~~~---~vk~gavVIDvGin 233 (285)
T PRK10792 207 VVAVGKPGFIPGE---WIKPGAIVIDVGIN 233 (285)
T ss_pred EEcCCCcccccHH---HcCCCcEEEEcccc
Confidence 9999999999875 57999999999954
|
|
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.5e-06 Score=97.72 Aligned_cols=93 Identities=20% Similarity=0.174 Sum_probs=74.3
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCH--------HHHhc------cC----CE
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTM--------EYAKK------YG----DI 868 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~--------~e~l~------~a----Dv 868 (1027)
..|++|+|.|.|.+|..+++.++.+|++|++++.++.+...+...|++ +++. .+.+. .. |+
T Consensus 165 ~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~ 244 (349)
T TIGR03201 165 KKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWK 244 (349)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCE
Confidence 579999999999999999999999999999999999888888888875 2221 11111 23 48
Q ss_pred EEecCCCcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 869 FVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 869 vi~atG~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
+++|+|+...+. ..++.++++|+++.+|....
T Consensus 245 v~d~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~ 276 (349)
T TIGR03201 245 IFECSGSKPGQE-SALSLLSHGGTLVVVGYTMA 276 (349)
T ss_pred EEECCCChHHHH-HHHHHHhcCCeEEEECcCCC
Confidence 999999876444 45889999999999998743
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=98.23 E-value=2e-06 Score=99.50 Aligned_cols=152 Identities=15% Similarity=0.095 Sum_probs=99.6
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-----HHHhc-----cCCEEEecCCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-----EYAKK-----YGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-----~e~l~-----~aDvvi~atG~ 875 (1027)
..|++|+|.|.|.||..+++.++.+|+ +|++++.++.+...+...|++ +.+. .+.+. ..|++++++|.
T Consensus 190 ~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~ 269 (371)
T cd08281 190 RPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGS 269 (371)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCC
Confidence 579999999999999999999999999 699999999998888888885 3321 11111 37999999997
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC--cccchhh--hhccceeccccceeee-ecCC-CcEEEEecCCccccccCCCCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD--NEIEVEK--LKKYKWENIKPQVDHI-IFPD-GKKIILLAEGRLVNLGCGTGHP 949 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d--~eid~~~--l~~~~~~~~~~~v~~y-~~~d-g~~i~LLa~GrlvNl~~~~G~P 949 (1027)
...+. ..++.+++++.++.+|... ..++++. +...+..........+ ...+ .+.+.++++|++ .+
T Consensus 270 ~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i--------~~ 340 (371)
T cd08281 270 VPALE-TAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRL--------PV 340 (371)
T ss_pred hHHHH-HHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCC--------Cc
Confidence 66444 4589999999999999753 2233332 2111111111110000 0001 245566777776 45
Q ss_pred cceEehhhHhHHHHHHHHh
Q psy15208 950 SYVMSSSFANQTLAQIELF 968 (1027)
Q Consensus 950 ~~vmd~sf~~q~la~~~l~ 968 (1027)
..+++..|.+..+.+.+-.
T Consensus 341 ~~~i~~~~~l~~~~~A~~~ 359 (371)
T cd08281 341 DKLLTHRLPLDEINEGFDR 359 (371)
T ss_pred hhheeeeecHHHHHHHHHH
Confidence 5566777777666665543
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=98.22 E-value=5.3e-06 Score=85.69 Aligned_cols=79 Identities=25% Similarity=0.357 Sum_probs=68.9
Q ss_pred CccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHHH
Q psy15208 805 DVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDH 883 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~ 883 (1027)
...+.||+|+|+|+|. +|+.+|+.|...|++|++++++. ..+.+.+.++|+||+|||.+++++.++
T Consensus 39 ~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~-------------~~l~~~l~~aDiVIsat~~~~ii~~~~ 105 (168)
T cd01080 39 GIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT-------------KNLKEHTKQADIVIVAVGKPGLVKGDM 105 (168)
T ss_pred CCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc-------------hhHHHHHhhCCEEEEcCCCCceecHHH
Confidence 3468999999999998 69999999999999999997653 245678899999999999988999875
Q ss_pred HhcCCCCeEEEEecCC
Q psy15208 884 MRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~ 899 (1027)
++++.+++++|..
T Consensus 106 ---~~~~~viIDla~p 118 (168)
T cd01080 106 ---VKPGAVVIDVGIN 118 (168)
T ss_pred ---ccCCeEEEEccCC
Confidence 6889999999986
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.22 E-value=8e-06 Score=88.39 Aligned_cols=106 Identities=19% Similarity=0.231 Sum_probs=68.9
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHh--------CCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS--------LGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKY 104 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~--------~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~ 104 (1027)
+.+|||+||. +|+.. .++.++..+.+ ..++++++|+......-. ........+.+...++.+...+
T Consensus 4 g~pVlFIhG~---~Gs~~--q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~-g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 4 GIPVLFIHGN---AGSYK--QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH-GRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCEEEEECcC---CCCHh--HHHHHHHHHhhhhhhccCccceeEEEeccCccccccc-cccHHHHHHHHHHHHHHHHHhh
Confidence 4678999996 55554 35566655522 258899999976432211 1122233444555556665544
Q ss_pred -----CCCcEEEEEechhHHHHHHHHHhcCC-cCCccEEEEEccCC
Q psy15208 105 -----PYLPIILAGFSFGTFVQAKLQKRLDK-EISIKILILISVAV 144 (1027)
Q Consensus 105 -----~~~pviLVGhSmGG~vAl~~A~~~p~-~~~V~gLVli~p~~ 144 (1027)
+..+++|+||||||.++..+....+. ...++.+|.++.|.
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 55689999999999999888876542 22689999998764
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.22 E-value=7.5e-05 Score=83.74 Aligned_cols=151 Identities=24% Similarity=0.291 Sum_probs=101.0
Q ss_pred eEEEEEecCCceEEEEEE-ecCCccccCCccEEEEECCCCCCCCCCChHHH-----HHHHHHHHhCCcEEEEEcCCCCCC
Q psy15208 5 TKFFNINGSVGILHCAIN-FPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVV-----QTLVRVMLSLGYISIRMNFRGVGA 78 (1027)
Q Consensus 5 ~~~i~I~t~dG~I~~~l~-~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~-----~~la~~La~~Gy~Vla~DlrGhG~ 78 (1027)
.+++.|...+-.|.+... .|.. .+...+|++-|. ++.+++... ..|.+..-..|.+|+.+++||.|.
T Consensus 112 ~kRv~Iq~D~~~IDt~~I~~~~a----~~~RWiL~s~GN---g~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~ 184 (365)
T PF05677_consen 112 VKRVPIQYDGVKIDTMAIHQPEA----KPQRWILVSNGN---GECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGS 184 (365)
T ss_pred eeeEEEeeCCEEEEEEEeeCCCC----CCCcEEEEEcCC---hHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCcccc
Confidence 456777774446666543 3443 456788999996 445554211 123333334588999999999999
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCC---CCcEEEEEechhHHHHHHHHHhcCCc--CCccEEEEEccCCC--------
Q psy15208 79 SSGTYDSGNGETDDMEILLRYIQKKYP---YLPIILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVAVK-------- 145 (1027)
Q Consensus 79 S~g~~~~~~~~~~Dv~avl~~L~~~~~---~~pviLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~~~-------- 145 (1027)
|.|.. +...++.|..+.+++|+++.. ...+++.|||+||.++..+..++... ..++-+++-+-.+.
T Consensus 185 S~G~~-s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRsfssl~~vas~ 263 (365)
T PF05677_consen 185 STGPP-SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRSFSSLAAVASQ 263 (365)
T ss_pred CCCCC-CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCCcchHHHHHHH
Confidence 99985 568899999999999987432 24699999999999998866654321 12444554443221
Q ss_pred -------------cC------CCCCCCCcEEEEEeCC
Q psy15208 146 -------------KW------LIPEVPKNTIIIHGEL 163 (1027)
Q Consensus 146 -------------~~------~l~~i~~PvLiIhG~~ 163 (1027)
.| ....+.||-+++|+.+
T Consensus 264 ~~~~~~~~l~~l~gWnidS~K~s~~l~cpeIii~~~d 300 (365)
T PF05677_consen 264 FFGPIGKLLIKLLGWNIDSAKNSEKLQCPEIIIYGVD 300 (365)
T ss_pred HHHHHHHHHHHHhccCCCchhhhccCCCCeEEEeccc
Confidence 12 1456779999999874
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=6.1e-06 Score=92.23 Aligned_cols=91 Identities=24% Similarity=0.270 Sum_probs=76.5
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCC-hhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYG-DVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G-~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.++..-+ +..++.+.||+|+|+|.| -+|+.+|..|...|+.|++++.... ++.+..++||+||
T Consensus 142 Tp~aii~lL-~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~-------------~l~e~~~~ADIVI 207 (301)
T PRK14194 142 TPSGCLRLL-EDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST-------------DAKALCRQADIVV 207 (301)
T ss_pred cHHHHHHHH-HHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC-------------CHHHHHhcCCEEE
Confidence 445555444 445778999999999997 8999999999999999999976532 5788889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+++|.++.+.... +|+|++++++|.-
T Consensus 208 savg~~~~v~~~~---ik~GaiVIDvgin 233 (301)
T PRK14194 208 AAVGRPRLIDADW---LKPGAVVIDVGIN 233 (301)
T ss_pred EecCChhcccHhh---ccCCcEEEEeccc
Confidence 9999999888764 8999999999964
|
|
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=6e-06 Score=91.59 Aligned_cols=92 Identities=28% Similarity=0.357 Sum_probs=77.6
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.+++.-+.+ .++.+.||+|+|+|.|. +|+.+|..|...||.|++++..- -++.+..++||+|
T Consensus 146 cTp~av~~ll~~-~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T-------------~~l~~~~~~ADIv 211 (287)
T PRK14176 146 CTPHGVIRALEE-YGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFT-------------DDLKKYTLDADIL 211 (287)
T ss_pred CcHHHHHHHHHH-cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccC-------------CCHHHHHhhCCEE
Confidence 355666655544 47789999999999999 99999999999999999997432 2567788999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|+|.++.++.+ ++|+|++++++|.-
T Consensus 212 v~AvG~p~~i~~~---~vk~gavVIDvGin 238 (287)
T PRK14176 212 VVATGVKHLIKAD---MVKEGAVIFDVGIT 238 (287)
T ss_pred EEccCCccccCHH---HcCCCcEEEEeccc
Confidence 9999999999866 58999999999984
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=98.20 E-value=5.4e-06 Score=88.60 Aligned_cols=103 Identities=22% Similarity=0.316 Sum_probs=74.6
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEEe
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGF 114 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGh 114 (1027)
.|+++|+. +|+. ..|..+++.|....+.|+.++++|++.......+.+.++ ...++.+....+..|+.|+||
T Consensus 2 ~lf~~p~~---gG~~--~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~la---~~y~~~I~~~~~~gp~~L~G~ 73 (229)
T PF00975_consen 2 PLFCFPPA---GGSA--SSYRPLARALPDDVIGVYGIEYPGRGDDEPPPDSIEELA---SRYAEAIRARQPEGPYVLAGW 73 (229)
T ss_dssp EEEEESST---TCSG--GGGHHHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHHH---HHHHHHHHHHTSSSSEEEEEE
T ss_pred eEEEEcCC---ccCH--HHHHHHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHHH---HHHHHHhhhhCCCCCeeehcc
Confidence 57999996 3332 368899999976459999999999984433333434444 345566666656669999999
Q ss_pred chhHHHHHHHHHhcCC-cCCccEEEEEccCCC
Q psy15208 115 SFGTFVQAKLQKRLDK-EISIKILILISVAVK 145 (1027)
Q Consensus 115 SmGG~vAl~~A~~~p~-~~~V~gLVli~p~~~ 145 (1027)
|+||.+|+.+|.+..+ ...+..+++++++++
T Consensus 74 S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 74 SFGGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp THHHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred CccHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 9999999999987543 235889999986554
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PRK05479 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.9e-06 Score=94.43 Aligned_cols=93 Identities=26% Similarity=0.352 Sum_probs=74.9
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCch-hHHHHhhcCcEEcCHHHHhccCCEEEecCCCc---ccCcHH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPI-CALQAAMEGFLVVTMEYAKKYGDIFVTCTGNY---HVITHD 882 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~-r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~---~vi~~~ 882 (1027)
.+.|++|+|||+|.+|+++|+.|+..|.+|++.+.++. ....+...|+.+.+.+++++.+|+|+.++... .++..+
T Consensus 14 ~L~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVPd~~~~~V~~~~ 93 (330)
T PRK05479 14 LIKGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLPDEVQAEVYEEE 93 (330)
T ss_pred hhCCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCCHHHHHHHHHHH
Confidence 47899999999999999999999999999998876543 33456678998889999999999999988643 444455
Q ss_pred HHhcCCCCeEEEEecCC
Q psy15208 883 HMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~ 899 (1027)
.+..|++|.+|+.+..+
T Consensus 94 I~~~Lk~g~iL~~a~G~ 110 (330)
T PRK05479 94 IEPNLKEGAALAFAHGF 110 (330)
T ss_pred HHhcCCCCCEEEECCCC
Confidence 56789999988554443
|
|
| >KOG2551|consensus | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.5e-05 Score=82.59 Aligned_cols=147 Identities=22% Similarity=0.179 Sum_probs=97.4
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCC------CCCCCC-----C----------C-------
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRG------VGASSG-----T----------Y------- 83 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrG------hG~S~g-----~----------~------- 83 (1027)
.++-||++||+.+.+..+.. ....|.+.|.+. +..+.+|-|- .-.+.+ . +
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~-Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~ 81 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSE-KTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEAS 81 (230)
T ss_pred CCceEEEecchhhccHHHHH-HhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccc
Confidence 45678999999875544432 233466666554 7778877762 111111 0 0
Q ss_pred -CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhc------CCcCCccEEEEEccCCCc-------CCC
Q psy15208 84 -DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRL------DKEISIKILILISVAVKK-------WLI 149 (1027)
Q Consensus 84 -~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~------p~~~~V~gLVli~p~~~~-------~~l 149 (1027)
......-..+..+.+++.++.|- -.|+|+|+|+.++..++... .+.+.++-+|++++.... ...
T Consensus 82 ~~~~~~~eesl~yl~~~i~enGPF--DGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~~~~~~ 159 (230)
T KOG2551|consen 82 FTEYFGFEESLEYLEDYIKENGPF--DGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLDESAYK 159 (230)
T ss_pred cccccChHHHHHHHHHHHHHhCCC--ccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhhhhhhc
Confidence 01112333456666667666554 38999999999998888721 123457888988876543 135
Q ss_pred CCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 150 PEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 150 ~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
+.+++|.|.+.|+.|.++|...+..+++.....
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a 192 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESFKDA 192 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhcCCC
Confidence 688999999999999999999998888876655
|
|
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.1e-06 Score=97.49 Aligned_cols=91 Identities=18% Similarity=0.183 Sum_probs=74.9
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcCHH---HHh------ccCCEEEecCCCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVTME---YAK------KYGDIFVTCTGNY 876 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~~~---e~l------~~aDvvi~atG~~ 876 (1027)
..|++|+|+|.|.||..+++.++.+|++ |++++.++.|...+...|++ +.+.. +.+ ..+|++++++|..
T Consensus 119 ~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~ 198 (280)
T TIGR03366 119 LKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGAT 198 (280)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCCh
Confidence 4899999999999999999999999996 99999999898888888885 33321 111 1479999999987
Q ss_pred ccCcHHHHhcCCCCeEEEEecCC
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
..+. ..++.+++++.++.+|..
T Consensus 199 ~~~~-~~~~~l~~~G~iv~~G~~ 220 (280)
T TIGR03366 199 AAVR-ACLESLDVGGTAVLAGSV 220 (280)
T ss_pred HHHH-HHHHHhcCCCEEEEeccC
Confidence 6555 458999999999999964
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.19 E-value=6.4e-06 Score=98.24 Aligned_cols=135 Identities=19% Similarity=0.226 Sum_probs=104.4
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEEC--CCCCCCCCCChHHHHHHHH---HHHhCCcEEEEEcCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAH--PHPLFGGTMDNKVVQTLVR---VMLSLGYISIRMNFRGVG 77 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllH--G~~~~gGs~~~~~~~~la~---~La~~Gy~Vla~DlrGhG 77 (1027)
..+.+.++..|| +|+.-+|.|++ .++.|+++..+ ...-..+.+.. ...... .|+.+||.|+..|.||.|
T Consensus 18 ~~~~v~V~MRDGvrL~~dIy~Pa~---~g~~Pvll~~~~~Py~k~~~~~~~--~~~~~p~~~~~aa~GYavV~qDvRG~~ 92 (563)
T COG2936 18 IERDVMVPMRDGVRLAADIYRPAG---AGPLPVLLSRTRLPYRKRNGTFGP--QLSALPQPAWFAAQGYAVVNQDVRGRG 92 (563)
T ss_pred eeeeeeEEecCCeEEEEEEEccCC---CCCCceeEEeeccccccccccCcc--hhhcccccceeecCceEEEEecccccc
Confidence 345688999999 89999999997 47889999888 43221111111 122334 688899999999999999
Q ss_pred CCCCCCCCccc-hHHHHHHHHHHHHHh-CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 78 ASSGTYDSGNG-ETDDMEILLRYIQKK-YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 78 ~S~g~~~~~~~-~~~Dv~avl~~L~~~-~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
.|+|.+..+.. .++|.-..++|+..+ ..+.+|..+|.|++|...+.+|+..|. .+++++...+...
T Consensus 93 ~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pP--aLkai~p~~~~~D 160 (563)
T COG2936 93 GSEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPP--ALKAIAPTEGLVD 160 (563)
T ss_pred cCCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCc--hheeecccccccc
Confidence 99998755555 889999999999875 234479999999999999999999887 5788887777654
|
|
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.9e-06 Score=98.63 Aligned_cols=93 Identities=23% Similarity=0.332 Sum_probs=75.5
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-------HHHHhc-----cCCEEEec
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-------MEYAKK-----YGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------~~e~l~-----~aDvvi~a 872 (1027)
...|++|+|+|.|.||..+++.++.+|+ +|++++.++.+...+...|++ +++ ..+.+. ..|+++++
T Consensus 196 ~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~ 275 (381)
T PLN02740 196 VQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFEC 275 (381)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEEC
Confidence 3579999999999999999999999999 699999999998888888875 332 122221 48999999
Q ss_pred CCCcccCcHHHHhcCCCC-eEEEEecCCC
Q psy15208 873 TGNYHVITHDHMRDMKDQ-AIVCNIGHFD 900 (1027)
Q Consensus 873 tG~~~vi~~~~~~~mk~g-ailvNvG~~d 900 (1027)
+|....+. ..+..++++ |+++.+|...
T Consensus 276 ~G~~~~~~-~a~~~~~~g~G~~v~~G~~~ 303 (381)
T PLN02740 276 AGNVEVLR-EAFLSTHDGWGLTVLLGIHP 303 (381)
T ss_pred CCChHHHH-HHHHhhhcCCCEEEEEccCC
Confidence 99876555 458889886 9999999864
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.18 E-value=3.8e-06 Score=89.91 Aligned_cols=146 Identities=20% Similarity=0.174 Sum_probs=72.3
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCC-----CCC------------C------CCCC---
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVG-----ASS------------G------TYDS--- 85 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG-----~S~------------g------~~~~--- 85 (1027)
.++-||++||+++++.-+. .....+.+.|.+.++..+.+|-|--- -.. . ....
T Consensus 3 ~k~riLcLHG~~~na~if~-~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFR-QQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--HHHHH-HHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCHHHHH-HHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 3677999999854322111 12335666665547888888864221 110 0 0011
Q ss_pred -ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcC------CcCCccEEEEEccCCCcC-------CCCC
Q psy15208 86 -GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLD------KEISIKILILISVAVKKW-------LIPE 151 (1027)
Q Consensus 86 -~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p------~~~~V~gLVli~p~~~~~-------~l~~ 151 (1027)
.....+.+..+.+++.+..| -..++|+|+||.+|..++.... ....++.+|++++..+.. ....
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~~~~~~~~~ 159 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDYQELYDEPK 159 (212)
T ss_dssp GG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-GTTTT--TT
T ss_pred cccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhhhhhhcccc
Confidence 12233334445555555533 2589999999999988876432 123578899998765431 2456
Q ss_pred CCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 152 VPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 152 i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
+.+|+|.++|.+|.+++++.+..+.+...
T Consensus 160 i~iPtlHv~G~~D~~~~~~~s~~L~~~~~ 188 (212)
T PF03959_consen 160 ISIPTLHVIGENDPVVPPERSEALAEMFD 188 (212)
T ss_dssp ---EEEEEEETT-SSS-HHHHHHHHHHHH
T ss_pred CCCCeEEEEeCCCCCcchHHHHHHHHhcc
Confidence 78999999999999999888876665443
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.9e-05 Score=87.98 Aligned_cols=109 Identities=14% Similarity=0.156 Sum_probs=72.9
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC----CCC
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKY----PYL 107 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~----~~~ 107 (1027)
++.+|||+.|.+. |-....+...+++.|...||.++-+.++-.-.-.| ..+.+..++|+.+++++|+... ...
T Consensus 32 ~~~~llfIGGLtD--Gl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G-~~SL~~D~~eI~~~v~ylr~~~~g~~~~~ 108 (303)
T PF08538_consen 32 APNALLFIGGLTD--GLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWG-TSSLDRDVEEIAQLVEYLRSEKGGHFGRE 108 (303)
T ss_dssp SSSEEEEE--TT----TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS--S--HHHHHHHHHHHHHHHHHHS------S
T ss_pred CCcEEEEECCCCC--CCCCCchHHHHHHHhccCCeEEEEEEecCccCCcC-cchhhhHHHHHHHHHHHHHHhhccccCCc
Confidence 4668999999853 33334577889999987899999998853111111 2345667999999999999873 456
Q ss_pred cEEEEEechhHHHHHHHHHhcCC---cCCccEEEEEccC
Q psy15208 108 PIILAGFSFGTFVQAKLQKRLDK---EISIKILILISVA 143 (1027)
Q Consensus 108 pviLVGhSmGG~vAl~~A~~~p~---~~~V~gLVli~p~ 143 (1027)
+|+|+|||-|+.-.+.+...... ...|++.|+-+|.
T Consensus 109 kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApV 147 (303)
T PF08538_consen 109 KIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPV 147 (303)
T ss_dssp -EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE-
T ss_pred cEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCC
Confidence 89999999999999999987643 3479999999984
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.17 E-value=5.9e-06 Score=86.43 Aligned_cols=92 Identities=20% Similarity=0.223 Sum_probs=71.4
Q ss_pred CccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH-HhhcCcE-E--cC----HHHHhccCCEEEecCCC
Q psy15208 805 DVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ-AAMEGFL-V--VT----MEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-A~~~G~~-v--~~----~~e~l~~aDvvi~atG~ 875 (1027)
++.+.||+|+|+|-+. +|+-+|..|...||.|+++|.+.+.... ...+... . .+ +.+.+++|||||.|+|.
T Consensus 57 ~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~ 136 (197)
T cd01079 57 GNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPS 136 (197)
T ss_pred CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEccCC
Confidence 3479999999999999 9999999999999999999865532210 0000011 1 12 56778999999999999
Q ss_pred ccc-CcHHHHhcCCCCeEEEEecCC
Q psy15208 876 YHV-ITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 876 ~~v-i~~~~~~~mk~gailvNvG~~ 899 (1027)
+++ +..+. +|+|+++|++|..
T Consensus 137 ~~~~i~~d~---ik~GavVIDVGi~ 158 (197)
T cd01079 137 PNYKVPTEL---LKDGAICINFASI 158 (197)
T ss_pred CCCccCHHH---cCCCcEEEEcCCC
Confidence 998 88764 7999999999986
|
The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional |
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=7.9e-06 Score=90.65 Aligned_cols=91 Identities=26% Similarity=0.296 Sum_probs=75.3
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCC-hhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYG-DVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G-~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.++..-+ +..++.+.||+|+|+|.| -+|+.+|..|...||.|++++... -++.+.+++||+||
T Consensus 140 Tp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t-------------~~l~~~~~~ADIvV 205 (285)
T PRK14191 140 TPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT-------------KDLSFYTQNADIVC 205 (285)
T ss_pred cHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc-------------HHHHHHHHhCCEEE
Confidence 445555444 445778999999999999 599999999999999999995432 23567789999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 206 ~AvG~p~~i~~~~---vk~GavVIDvGi~ 231 (285)
T PRK14191 206 VGVGKPDLIKASM---VKKGAVVVDIGIN 231 (285)
T ss_pred EecCCCCcCCHHH---cCCCcEEEEeecc
Confidence 9999999999875 5999999999974
|
|
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=98.16 E-value=3.8e-06 Score=96.43 Aligned_cols=92 Identities=16% Similarity=0.134 Sum_probs=75.1
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcC---CchhHHHHhhcCcEEcCHHH-------HhccCCEEEecCCCcc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEI---DPICALQAAMEGFLVVTMEY-------AKKYGDIFVTCTGNYH 877 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~---dp~r~~~A~~~G~~v~~~~e-------~l~~aDvvi~atG~~~ 877 (1027)
..|++|+|+|.|.||+.+++.|+..|++|++++. ++.+...+...|++.++..+ .....|+||+++|...
T Consensus 171 ~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 250 (355)
T cd08230 171 WNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVPP 250 (355)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCCHH
Confidence 4799999999999999999999999999999987 67787788888987543211 1234799999999765
Q ss_pred cCcHHHHhcCCCCeEEEEecCCC
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d 900 (1027)
.+. +.++.|+++|.++.+|...
T Consensus 251 ~~~-~~~~~l~~~G~~v~~G~~~ 272 (355)
T cd08230 251 LAF-EALPALAPNGVVILFGVPG 272 (355)
T ss_pred HHH-HHHHHccCCcEEEEEecCC
Confidence 444 5689999999999999864
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.16 E-value=6.6e-06 Score=95.64 Aligned_cols=125 Identities=19% Similarity=0.253 Sum_probs=71.5
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCC------CC-----C-------------CCCc
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGAS------SG-----T-------------YDSG 86 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S------~g-----~-------------~~~~ 86 (1027)
...|+|||.||++ |+.. .+..++..||++||-|+++|.|..-.+ ++ . +...
T Consensus 98 ~~~PvvIFSHGlg---g~R~--~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T PF03403_consen 98 GKFPVVIFSHGLG---GSRT--SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDF 172 (379)
T ss_dssp S-EEEEEEE--TT-----TT--TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE----
T ss_pred CCCCEEEEeCCCC---cchh--hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccc
Confidence 4689999999984 4433 377899999999999999999954211 00 0 0000
Q ss_pred -------------cchHHHHHHHHHHHHHhC----------------------CCCcEEEEEechhHHHHHHHHHhcCCc
Q psy15208 87 -------------NGETDDMEILLRYIQKKY----------------------PYLPIILAGFSFGTFVQAKLQKRLDKE 131 (1027)
Q Consensus 87 -------------~~~~~Dv~avl~~L~~~~----------------------~~~pviLVGhSmGG~vAl~~A~~~p~~ 131 (1027)
+..+.|+..+++.+.... +..+++++|||+||+.++.++.+..
T Consensus 173 ~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~-- 250 (379)
T PF03403_consen 173 DPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDT-- 250 (379)
T ss_dssp -GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-T--
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhcc--
Confidence 012455556666665310 1135999999999999999888763
Q ss_pred CCccEEEEEccCCCcC---CCCCCCCcEEEEEeCC
Q psy15208 132 ISIKILILISVAVKKW---LIPEVPKNTIIIHGEL 163 (1027)
Q Consensus 132 ~~V~gLVli~p~~~~~---~l~~i~~PvLiIhG~~ 163 (1027)
++++.|+++|...+. ....++.|+|+|+.+.
T Consensus 251 -r~~~~I~LD~W~~Pl~~~~~~~i~~P~L~InSe~ 284 (379)
T PF03403_consen 251 -RFKAGILLDPWMFPLGDEIYSKIPQPLLFINSES 284 (379)
T ss_dssp -T--EEEEES---TTS-GGGGGG--S-EEEEEETT
T ss_pred -CcceEEEeCCcccCCCcccccCCCCCEEEEECcc
Confidence 589999999864322 2356789999998875
|
|
| >PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=9.5e-06 Score=89.91 Aligned_cols=91 Identities=33% Similarity=0.389 Sum_probs=76.4
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.++..-+ +..++.+.||+|+|+|.+. +|+-+|..|...||.|++++..- -++.+.+++|||||
T Consensus 140 Tp~avi~lL-~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T-------------~~l~~~~~~ADIvI 205 (284)
T PRK14170 140 TPAGIIELI-KSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRT-------------KDLPQVAKEADILV 205 (284)
T ss_pred CHHHHHHHH-HHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEE
Confidence 445554443 4457889999999999999 99999999999999999995432 35678889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|..
T Consensus 206 ~AvG~~~~i~~~~---vk~GavVIDvGin 231 (284)
T PRK14170 206 VATGLAKFVKKDY---IKPGAIVIDVGMD 231 (284)
T ss_pred EecCCcCccCHHH---cCCCCEEEEccCc
Confidence 9999999999774 7999999999986
|
|
| >PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.1e-05 Score=89.56 Aligned_cols=92 Identities=29% Similarity=0.356 Sum_probs=77.1
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.+++.-+. ..++.+.||+|+|+|-+. +|+-+|..|...||.|+++...- .++.+..++||||
T Consensus 138 cTp~avi~lL~-~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T-------------~~l~~~~~~ADIv 203 (282)
T PRK14169 138 STPYGIMALLD-AYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKT-------------RNLKQLTKEADIL 203 (282)
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCC-------------CCHHHHHhhCCEE
Confidence 34555555444 447789999999999999 99999999999999999995432 2567788999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|+|.+++++.++ +|+|++++++|.-
T Consensus 204 I~AvG~p~~i~~~~---vk~GavVIDvGin 230 (282)
T PRK14169 204 VVAVGVPHFIGADA---VKPGAVVIDVGIS 230 (282)
T ss_pred EEccCCcCccCHHH---cCCCcEEEEeecc
Confidence 99999999999774 7999999999985
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.6e-05 Score=82.92 Aligned_cols=161 Identities=19% Similarity=0.304 Sum_probs=108.1
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEEe
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGF 114 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGh 114 (1027)
.+||+-|- +|+ .. .=..+++.|+++|+.|+.+|-+-+=.+.+ +.++.+.|+..++++...+...++++|+|+
T Consensus 4 ~~v~~SGD---gGw-~~-~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r---tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGY 75 (192)
T PF06057_consen 4 LAVFFSGD---GGW-RD-LDKQIAEALAKQGVPVVGVDSLRYFWSER---TPEQTAADLARIIRHYRARWGRKRVVLIGY 75 (192)
T ss_pred EEEEEeCC---CCc-hh-hhHHHHHHHHHCCCeEEEechHHHHhhhC---CHHHHHHHHHHHHHHHHHHhCCceEEEEee
Confidence 56777773 333 21 23578999999999999999875554543 335689999999999999988889999999
Q ss_pred chhHHHHHHHHHhcCC--cCCccEEEEEccCCC--------cCC--------------CCCCC-CcEEEEEeCCCCCCCh
Q psy15208 115 SFGTFVQAKLQKRLDK--EISIKILILISVAVK--------KWL--------------IPEVP-KNTIIIHGELDEIIPL 169 (1027)
Q Consensus 115 SmGG~vAl~~A~~~p~--~~~V~gLVli~p~~~--------~~~--------------l~~i~-~PvLiIhG~~D~iVP~ 169 (1027)
|+|+-+...+..+.|+ +.+|+.+++++|... .|+ +.+++ .|++.|+|.++.-.+.
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~pei~~l~~~~v~CiyG~~E~d~~c 155 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVSGWLGMGGDDAAYPVIPEIAKLPPAPVQCIYGEDEDDSLC 155 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhhhhcCCCCCcccCCchHHHHhCCCCeEEEEEcCCCCCCcC
Confidence 9999888888877775 346999999998643 111 22333 5899999998854222
Q ss_pred HHHHhhhCCCCCceEeeccccCCCCccccchhhhhhHHHHH
Q psy15208 170 KDVFLWANPLDIPVVVIPESVSEGHPDKIADQISDAILDEI 210 (1027)
Q Consensus 170 ~~~~~l~~~~~~~~L~t~Esv~~GHPdkvaDqIsdaILD~~ 210 (1027)
. .+.. .....+..+.. .|-+.-.+.++..|++.+
T Consensus 156 p---~l~~-~~~~~i~lpGg---HHfd~dy~~La~~Il~~l 189 (192)
T PF06057_consen 156 P---SLRQ-PGVEVIALPGG---HHFDGDYDALAKRILDAL 189 (192)
T ss_pred c---cccC-CCcEEEEcCCC---cCCCCCHHHHHHHHHHHH
Confidence 1 1111 12233333331 233444555666666543
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.1e-05 Score=89.67 Aligned_cols=91 Identities=25% Similarity=0.372 Sum_probs=77.1
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.++..-+. ..++.+.||+|+|+|-+. +|+-+|..|...||.|++++... .++.+.+++|||||
T Consensus 141 Tp~av~~lL~-~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t-------------~~l~~~~~~ADIvI 206 (284)
T PRK14190 141 TPHGILELLK-EYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKT-------------KNLAELTKQADILI 206 (284)
T ss_pred CHHHHHHHHH-HcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCc-------------hhHHHHHHhCCEEE
Confidence 4555554444 457789999999999999 99999999999999999996432 35778889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|..
T Consensus 207 ~AvG~p~~i~~~~---ik~gavVIDvGi~ 232 (284)
T PRK14190 207 VAVGKPKLITADM---VKEGAVVIDVGVN 232 (284)
T ss_pred EecCCCCcCCHHH---cCCCCEEEEeecc
Confidence 9999999999886 5999999999986
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.5e-05 Score=90.34 Aligned_cols=155 Identities=17% Similarity=0.207 Sum_probs=107.4
Q ss_pred CCceEEEEEEecCCcc---ccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCC--CCCCCCC----
Q psy15208 13 SVGILHCAINFPSSIK---LLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGV--GASSGTY---- 83 (1027)
Q Consensus 13 ~dG~I~~~l~~P~~~~---~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGh--G~S~g~~---- 83 (1027)
.++++...+|.|.... .....|+|++.||.+ ++..+ +..+++.|++.||.|.++|.+|. |+.+..+
T Consensus 48 r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~G---s~~~~--f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~ 122 (365)
T COG4188 48 RDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSG---SYVTG--FAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPG 122 (365)
T ss_pred cCCccccceeccCCCccccccCcCCeEEecCCCC---CCccc--hhhhHHHHhhCceEEEeccCCCcccccCChhhcCCc
Confidence 3457888888886521 113679999999974 44443 56699999999999999999984 4433221
Q ss_pred ----CCccchHHHHHHHHHHHHHh-----C----CCCcEEEEEechhHHHHHHHHHhcCC--------------------
Q psy15208 84 ----DSGNGETDDMEILLRYIQKK-----Y----PYLPIILAGFSFGTFVQAKLQKRLDK-------------------- 130 (1027)
Q Consensus 84 ----~~~~~~~~Dv~avl~~L~~~-----~----~~~pviLVGhSmGG~vAl~~A~~~p~-------------------- 130 (1027)
..+.+...|+..++++|.+. . ...+|.++|||+||+.++.++....+
T Consensus 123 ~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~ 202 (365)
T COG4188 123 SYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPG 202 (365)
T ss_pred ccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCC
Confidence 11235678888888888775 1 23479999999999999887632211
Q ss_pred ----------------------cCCccEEEEEccCCCcC----CCCCCCCcEEEEEeCCCCCCChHHH
Q psy15208 131 ----------------------EISIKILILISVAVKKW----LIPEVPKNTIIIHGELDEIIPLKDV 172 (1027)
Q Consensus 131 ----------------------~~~V~gLVli~p~~~~~----~l~~i~~PvLiIhG~~D~iVP~~~~ 172 (1027)
..++++++...|....- -+..++.|++++.|..|.+.|+..-
T Consensus 203 ~~~~~l~q~~av~~~~~~~~~rDpriravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~ 270 (365)
T COG4188 203 LNGRLLNQCAAVWLPRQAYDLRDPRIRAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTE 270 (365)
T ss_pred cChhhhccccccccchhhhccccccceeeeeccCCcccccccccceeeecceeeecccccccCCcccc
Confidence 01355555555543321 2667889999999999998877653
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=98.11 E-value=1e-05 Score=83.55 Aligned_cols=92 Identities=22% Similarity=0.280 Sum_probs=69.1
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE---Ec------------------------CH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL---VV------------------------TM 859 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~---v~------------------------~~ 859 (1027)
.+...+|+|+|.|.+|++.++.|+++|++|++.|.++.+..+....+.. +. .+
T Consensus 17 ~~~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 96 (168)
T PF01262_consen 17 GVPPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNF 96 (168)
T ss_dssp EE-T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHH
T ss_pred CCCCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHH
Confidence 3677999999999999999999999999999999999877766665554 21 13
Q ss_pred HHHhccCCEEEecC-----CCcccCcHHHHhcCCCCeEEEEecC
Q psy15208 860 EYAKKYGDIFVTCT-----GNYHVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 860 ~e~l~~aDvvi~at-----G~~~vi~~~~~~~mk~gailvNvG~ 898 (1027)
.+.++.+|+||.+. ..+.++++++++.||++.+++.+.-
T Consensus 97 ~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~ 140 (168)
T PF01262_consen 97 AEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC 140 (168)
T ss_dssp HHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred HHHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence 45566799998632 3567999999999999999998843
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.11 E-value=5.9e-06 Score=96.01 Aligned_cols=147 Identities=12% Similarity=0.046 Sum_probs=96.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchh-HHHHhhcCcE-EcCH------HHHhccCCEEEecCCCcccC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPIC-ALQAAMEGFL-VVTM------EYAKKYGDIFVTCTGNYHVI 879 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r-~~~A~~~G~~-v~~~------~e~l~~aDvvi~atG~~~vi 879 (1027)
..|++|+|.|.|.||..+++.++.+|++|++++.++.+ ...+...|++ +++. .+.....|++++++|+...+
T Consensus 177 ~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~D~vid~~G~~~~~ 256 (375)
T PLN02178 177 ESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHAL 256 (375)
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCCcEEEECCCcHHHH
Confidence 47999999999999999999999999999998876544 4556677875 3221 12223479999999987544
Q ss_pred cHHHHhcCCCCeEEEEecCCCc--ccchhhhhccceeccccceeeeecCC-CcEEEEecCCccccccCCCCCCcceEehh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDN--EIEVEKLKKYKWENIKPQVDHIIFPD-GKKIILLAEGRLVNLGCGTGHPSYVMSSS 956 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~--eid~~~l~~~~~~~~~~~v~~y~~~d-g~~i~LLa~GrlvNl~~~~G~P~~vmd~s 956 (1027)
. ..++.++++|.++.+|.... +++...+...+........ +...+ .+.+.++++|++ .|. + ..
T Consensus 257 ~-~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~~~~l~~~g~i--------~~~-i--~~ 322 (375)
T PLN02178 257 L-PLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQI--GGMKETQEMLEFCAKHKI--------VSD-I--EL 322 (375)
T ss_pred H-HHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCc--cCHHHHHHHHHHHHhCCC--------ccc-E--EE
Confidence 4 45899999999999997643 3444433222222111111 11112 357778888887 332 3 24
Q ss_pred hHhHHHHHHHHh
Q psy15208 957 FANQTLAQIELF 968 (1027)
Q Consensus 957 f~~q~la~~~l~ 968 (1027)
|.+..+...+-.
T Consensus 323 ~~l~~~~~A~~~ 334 (375)
T PLN02178 323 IKMSDINSAMDR 334 (375)
T ss_pred EeHHHHHHHHHH
Confidence 666666665544
|
|
| >PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.2e-05 Score=89.08 Aligned_cols=92 Identities=23% Similarity=0.354 Sum_probs=77.2
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.+++.-+.+ .++.+.||+|+|+|-+. +|+-+|..|...||.|++++..- -++.+..++||||
T Consensus 139 cTp~avi~lL~~-y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T-------------~nl~~~~~~ADIv 204 (282)
T PRK14166 139 CTPLGVMKLLKA-YEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT-------------KDLSLYTRQADLI 204 (282)
T ss_pred CCHHHHHHHHHH-hCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEE
Confidence 345555554444 47789999999999999 99999999999999999996532 3577788999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|+|.+++++.++ +|+|++++++|.-
T Consensus 205 IsAvGkp~~i~~~~---vk~GavVIDvGin 231 (282)
T PRK14166 205 IVAAGCVNLLRSDM---VKEGVIVVDVGIN 231 (282)
T ss_pred EEcCCCcCccCHHH---cCCCCEEEEeccc
Confidence 99999999999774 7999999999974
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.5e-06 Score=95.39 Aligned_cols=91 Identities=19% Similarity=0.225 Sum_probs=77.1
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-H-H---HHh-ccCCEEEecCCCcccCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-M-E---YAK-KYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-~-~---e~l-~~aDvvi~atG~~~vi~ 880 (1027)
-+|++|+|+|+|.+|...+|.|+++||+|+++++++.++..|..+|.+ +.+ . + +.+ ..+|+++++.+ ...++
T Consensus 165 ~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~tv~-~~~~~ 243 (339)
T COG1064 165 KPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIIDTVG-PATLE 243 (339)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEEECCC-hhhHH
Confidence 579999999999999999999999999999999999999999999987 222 1 1 222 23999999998 66566
Q ss_pred HHHHhcCCCCeEEEEecCCC
Q psy15208 881 HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d 900 (1027)
..++.||++|.++-+|...
T Consensus 244 -~~l~~l~~~G~~v~vG~~~ 262 (339)
T COG1064 244 -PSLKALRRGGTLVLVGLPG 262 (339)
T ss_pred -HHHHHHhcCCEEEEECCCC
Confidence 4599999999999999984
|
|
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.6e-05 Score=88.24 Aligned_cols=91 Identities=20% Similarity=0.272 Sum_probs=76.6
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+++.- ++..++.+.||+|+|+|.+. +|+-+|..|...||.|++++..- -++.+..++|||||
T Consensus 142 Tp~avi~l-l~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T-------------~~l~~~~~~ADIvI 207 (284)
T PRK14177 142 TPYGMVLL-LKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKT-------------QNLPSIVRQADIIV 207 (284)
T ss_pred CHHHHHHH-HHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEE
Confidence 45555554 34457789999999999999 99999999999999999996432 35677889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 208 sAvGk~~~i~~~~---ik~gavVIDvGin 233 (284)
T PRK14177 208 GAVGKPEFIKADW---ISEGAVLLDAGYN 233 (284)
T ss_pred EeCCCcCccCHHH---cCCCCEEEEecCc
Confidence 9999999999774 7999999999984
|
|
| >PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.3e-05 Score=89.00 Aligned_cols=91 Identities=21% Similarity=0.236 Sum_probs=76.2
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.++..- .+..++.+.||+|+|+|-+. +|+-+|..|...||.|++++.. ..++.+..++|||||
T Consensus 142 Tp~av~~l-L~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~-------------T~~L~~~~~~ADIvV 207 (288)
T PRK14171 142 TALGCLAV-IKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSK-------------THNLSSITSKADIVV 207 (288)
T ss_pred CHHHHHHH-HHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC-------------CCCHHHHHhhCCEEE
Confidence 44555444 44458889999999999999 9999999999999999999642 235778889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 208 ~AvGkp~~i~~~~---vk~GavVIDvGin 233 (288)
T PRK14171 208 AAIGSPLKLTAEY---FNPESIVIDVGIN 233 (288)
T ss_pred EccCCCCccCHHH---cCCCCEEEEeecc
Confidence 9999999999774 7999999999964
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.09 E-value=8.9e-06 Score=95.99 Aligned_cols=92 Identities=12% Similarity=0.119 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCc
Q psy15208 52 KVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKE 131 (1027)
Q Consensus 52 ~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~ 131 (1027)
..|..+++.|.+.||.+ ..|++|+|.+.+..........++...++.+....+..+++|+||||||.+++.++..+|+.
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~ 186 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDV 186 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHh
Confidence 46888999999999865 88999999987653333456788888888888877788999999999999999999888762
Q ss_pred --CCccEEEEEccCC
Q psy15208 132 --ISIKILILISVAV 144 (1027)
Q Consensus 132 --~~V~gLVli~p~~ 144 (1027)
..|+.+|+++++.
T Consensus 187 ~~k~I~~~I~la~P~ 201 (440)
T PLN02733 187 FEKYVNSWIAIAAPF 201 (440)
T ss_pred HHhHhccEEEECCCC
Confidence 2478999998764
|
|
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.7e-05 Score=87.78 Aligned_cols=91 Identities=31% Similarity=0.385 Sum_probs=76.6
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+++.-+ +..++.+.||+|+|+|.+. +|+-+|..|...||.|++++..- -++.+..++|||||
T Consensus 141 Tp~av~~lL-~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T-------------~~l~~~~~~ADIvI 206 (278)
T PRK14172 141 TPNSVITLI-KSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKT-------------KNLKEVCKKADILV 206 (278)
T ss_pred CHHHHHHHH-HHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEE
Confidence 445555444 4457789999999999999 99999999999999999996432 35677889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 207 sAvGkp~~i~~~~---ik~gavVIDvGin 232 (278)
T PRK14172 207 VAIGRPKFIDEEY---VKEGAIVIDVGTS 232 (278)
T ss_pred EcCCCcCccCHHH---cCCCcEEEEeecc
Confidence 9999999999774 7999999999975
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.08 E-value=5.9e-06 Score=95.54 Aligned_cols=92 Identities=22% Similarity=0.240 Sum_probs=74.2
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-------HHHh-----ccCCEEEec
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-------EYAK-----KYGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-------~e~l-----~~aDvvi~a 872 (1027)
...|++|+|.|.|.||..+++.|+.+|+ +|++++.++.+...+...|++ +.+. .+.+ ...|+++++
T Consensus 183 ~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~ 262 (368)
T TIGR02818 183 VEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFEC 262 (368)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHhCCCCCEEEEC
Confidence 3579999999999999999999999999 799999999998888888875 3321 1212 147999999
Q ss_pred CCCcccCcHHHHhcCCCC-eEEEEecCC
Q psy15208 873 TGNYHVITHDHMRDMKDQ-AIVCNIGHF 899 (1027)
Q Consensus 873 tG~~~vi~~~~~~~mk~g-ailvNvG~~ 899 (1027)
+|....+. +.++.++++ +.++.+|..
T Consensus 263 ~G~~~~~~-~~~~~~~~~~G~~v~~g~~ 289 (368)
T TIGR02818 263 IGNVNVMR-AALECCHKGWGESIIIGVA 289 (368)
T ss_pred CCCHHHHH-HHHHHhhcCCCeEEEEecc
Confidence 99766444 458889886 999999976
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.7e-05 Score=88.35 Aligned_cols=91 Identities=22% Similarity=0.234 Sum_probs=76.6
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+++.-+ +..++.+.||+|+|+|-+. +|+-+|..|...||.|++++..- -++.+..++|||||
T Consensus 143 Tp~avi~lL-~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T-------------~~l~~~~~~ADIvV 208 (294)
T PRK14187 143 TPKGCLYLI-KTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSAT-------------RDLADYCSKADILV 208 (294)
T ss_pred CHHHHHHHH-HHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCC-------------CCHHHHHhhCCEEE
Confidence 445555444 4457789999999999999 99999999999999999996532 35677889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 209 sAvGkp~~i~~~~---ik~gaiVIDVGin 234 (294)
T PRK14187 209 AAVGIPNFVKYSW---IKKGAIVIDVGIN 234 (294)
T ss_pred EccCCcCccCHHH---cCCCCEEEEeccc
Confidence 9999999999775 6899999999974
|
|
| >PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.7e-05 Score=87.87 Aligned_cols=91 Identities=26% Similarity=0.316 Sum_probs=75.3
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.++..- ++..++.+.||+|+|+|.+. +|+-+|..|...||.|++++..- -++.+..++||+||
T Consensus 140 Tp~avi~l-L~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T-------------~~l~~~~~~ADIvV 205 (281)
T PRK14183 140 TPLGVMEL-LEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFT-------------KDLKAHTKKADIVI 205 (281)
T ss_pred cHHHHHHH-HHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------cCHHHHHhhCCEEE
Confidence 44555544 44457889999999999996 99999999999999999995422 24677889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|..
T Consensus 206 ~AvGkp~~i~~~~---vk~gavvIDvGin 231 (281)
T PRK14183 206 VGVGKPNLITEDM---VKEGAIVIDIGIN 231 (281)
T ss_pred EecCcccccCHHH---cCCCcEEEEeecc
Confidence 9999999999774 7999999999975
|
|
| >PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.8e-05 Score=88.39 Aligned_cols=92 Identities=26% Similarity=0.345 Sum_probs=76.8
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.+++.-+. ..++.+.||+|+|+|-+. +|+-+|..|...||.|++++..- -++.+..++||||
T Consensus 140 cTp~aii~lL~-~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T-------------~~l~~~~~~ADIv 205 (297)
T PRK14186 140 CTPAGVMRLLR-SQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRT-------------QDLASITREADIL 205 (297)
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEE
Confidence 34555554443 457789999999999999 99999999999999999995432 2567788999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|+|.+++++.++ +|+|++++++|..
T Consensus 206 IsAvGkp~~i~~~~---ik~gavVIDvGin 232 (297)
T PRK14186 206 VAAAGRPNLIGAEM---VKPGAVVVDVGIH 232 (297)
T ss_pred EEccCCcCccCHHH---cCCCCEEEEeccc
Confidence 99999999999774 7999999999986
|
|
| >PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+) | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.6e-05 Score=88.75 Aligned_cols=92 Identities=22% Similarity=0.293 Sum_probs=77.3
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.+++.-+. ..++.+.||+|+|+|-+. +|+-+|..|...||.|++++.. +-++++.+++||||
T Consensus 149 cTp~avi~lL~-~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~-------------T~nl~~~~~~ADIv 214 (299)
T PLN02516 149 CTPKGCLELLS-RSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSR-------------TPDPESIVREADIV 214 (299)
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC-------------CCCHHHHHhhCCEE
Confidence 34555554444 447889999999999999 9999999999999999999653 23577888999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|+|.++++..+. +|+|++++++|..
T Consensus 215 v~AvGk~~~i~~~~---vk~gavVIDvGin 241 (299)
T PLN02516 215 IAAAGQAMMIKGDW---IKPGAAVIDVGTN 241 (299)
T ss_pred EEcCCCcCccCHHH---cCCCCEEEEeecc
Confidence 99999999999774 7999999999975
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.3e-05 Score=79.92 Aligned_cols=93 Identities=24% Similarity=0.320 Sum_probs=71.4
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHH-Hhhc---CcEEcC---HHHHhccCCEEEecCCCc-c
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQ-AAME---GFLVVT---MEYAKKYGDIFVTCTGNY-H 877 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~-A~~~---G~~v~~---~~e~l~~aDvvi~atG~~-~ 877 (1027)
.+.|++|+|+|+|..|+.++..+...|++ |+++.+++.|+.+ +... .+...+ +.+.+.++|+||+||+.. .
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~~~~ 88 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVINATPSGMP 88 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEEE-SSTTST
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEEEecCCCCc
Confidence 58999999999999999999999999995 9999999887664 3333 334444 444567899999999765 4
Q ss_pred cCcHHHHhcCCCC-eEEEEecCC
Q psy15208 878 VITHDHMRDMKDQ-AIVCNIGHF 899 (1027)
Q Consensus 878 vi~~~~~~~mk~g-ailvNvG~~ 899 (1027)
.++++.+...++. .+++..+..
T Consensus 89 ~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 89 IITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp SSTHHHHTTTCHHCSEEEES-SS
T ss_pred ccCHHHHHHHHhhhhceeccccC
Confidence 7888887766654 489999864
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.6e-05 Score=88.41 Aligned_cols=91 Identities=23% Similarity=0.349 Sum_probs=76.5
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.++..-+. ..++.+.||+|+|+|-+. +|+-+|..|...||.|+++...- -++.+..++|||||
T Consensus 138 Tp~avi~lL~-~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T-------------~~l~~~~~~ADIvI 203 (287)
T PRK14173 138 TPAGVVRLLK-HYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKT-------------QDLPAVTRRADVLV 203 (287)
T ss_pred CHHHHHHHHH-HcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEE
Confidence 4555554444 457789999999999999 99999999999999999995432 35678889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 204 sAvGkp~~i~~~~---vk~GavVIDVGin 229 (287)
T PRK14173 204 VAVGRPHLITPEM---VRPGAVVVDVGIN 229 (287)
T ss_pred EecCCcCccCHHH---cCCCCEEEEccCc
Confidence 9999999998775 6999999999985
|
|
| >PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.5e-05 Score=90.14 Aligned_cols=92 Identities=23% Similarity=0.287 Sum_probs=77.0
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.++..-+. ..++.+.||+|+|+|-+. +|+-+|..|...||.|+++...- -++.+..++||||
T Consensus 196 CTp~avi~LL~-~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T-------------~nl~~~~~~ADIv 261 (345)
T PLN02897 196 CTPKGCVELLI-RSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFT-------------KDPEQITRKADIV 261 (345)
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCC-------------CCHHHHHhhCCEE
Confidence 34555555444 447789999999999999 99999999999999999996432 2467788999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|+|.+++++.++ +|+|+++|++|.-
T Consensus 262 IsAvGkp~~v~~d~---vk~GavVIDVGin 288 (345)
T PLN02897 262 IAAAGIPNLVRGSW---LKPGAVVIDVGTT 288 (345)
T ss_pred EEccCCcCccCHHH---cCCCCEEEEcccc
Confidence 99999999999774 7999999999985
|
|
| >PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.5e-05 Score=90.43 Aligned_cols=92 Identities=25% Similarity=0.329 Sum_probs=77.2
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.++..-+. ..++.+.||+|+|+|-+. +|+-+|..|...||.|+++... .-++.+..++||||
T Consensus 213 CTp~avielL~-~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~-------------T~nl~~~~r~ADIV 278 (364)
T PLN02616 213 CTPKGCIELLH-RYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR-------------TKNPEEITREADII 278 (364)
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCC-------------CCCHHHHHhhCCEE
Confidence 34555554444 457789999999999999 9999999999999999999543 23577888999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|+|.+++++.++ +|+|+++|++|.-
T Consensus 279 IsAvGkp~~i~~d~---vK~GAvVIDVGIn 305 (364)
T PLN02616 279 ISAVGQPNMVRGSW---IKPGAVVIDVGIN 305 (364)
T ss_pred EEcCCCcCcCCHHH---cCCCCEEEecccc
Confidence 99999999999774 7999999999974
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.06 E-value=6e-06 Score=95.32 Aligned_cols=147 Identities=12% Similarity=0.034 Sum_probs=94.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHH-HHhhcCcE-EcC------HHHHhccCCEEEecCCCcccC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICAL-QAAMEGFL-VVT------MEYAKKYGDIFVTCTGNYHVI 879 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~-~A~~~G~~-v~~------~~e~l~~aDvvi~atG~~~vi 879 (1027)
..|++|+|.|.|.||..+++.++.+|++|++++.++.+.. .+...|++ +.+ +.+.....|++++++|+...+
T Consensus 182 ~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~D~vid~~g~~~~~ 261 (360)
T PLN02586 182 EPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGTMDYIIDTVSAVHAL 261 (360)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhhcCCCCEEEECCCCHHHH
Confidence 4799999999999999999999999999988877665543 44567875 322 112223479999999976545
Q ss_pred cHHHHhcCCCCeEEEEecCCC--cccchhhhhccceecccccee-eeecCCCcEEEEecCCccccccCCCCCCcceEehh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFD--NEIEVEKLKKYKWENIKPQVD-HIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSS 956 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d--~eid~~~l~~~~~~~~~~~v~-~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~s 956 (1027)
. +.++.+++++.++.+|... .+++...+............. ...+ .+.+.++++|++ .| .+ + .
T Consensus 262 ~-~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~--~~~~~li~~g~i--------~~-~~-~-~ 327 (360)
T PLN02586 262 G-PLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKET--QEMLDFCAKHNI--------TA-DI-E-L 327 (360)
T ss_pred H-HHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHH--HHHHHHHHhCCC--------CC-cE-E-E
Confidence 4 4589999999999999753 344443332212111111110 1112 356677888877 23 22 2 4
Q ss_pred hHhHHHHHHHHh
Q psy15208 957 FANQTLAQIELF 968 (1027)
Q Consensus 957 f~~q~la~~~l~ 968 (1027)
|.+..+...+-.
T Consensus 328 ~~l~~~~~A~~~ 339 (360)
T PLN02586 328 IRMDEINTAMER 339 (360)
T ss_pred EeHHHHHHHHHH
Confidence 666666666544
|
|
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.05 E-value=9.2e-06 Score=89.30 Aligned_cols=89 Identities=24% Similarity=0.327 Sum_probs=73.2
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH-HhhcCcEEc-------CHHHHhccCCEEEecC---C--Cc
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ-AAMEGFLVV-------TMEYAKKYGDIFVTCT---G--NY 876 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-A~~~G~~v~-------~~~e~l~~aDvvi~at---G--~~ 876 (1027)
.-+|+|+|+|-+|...|+.+.++||+|++.|+|+.|+.+ -...+.++. .+++++.++|+||.+. | .+
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgakaP 247 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAP 247 (371)
T ss_pred CccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCCc
Confidence 368999999999999999999999999999999877665 223444422 3778889999998753 4 45
Q ss_pred ccCcHHHHhcCCCCeEEEEecC
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~ 898 (1027)
.+++++++++||+|++++++..
T Consensus 248 kLvt~e~vk~MkpGsVivDVAi 269 (371)
T COG0686 248 KLVTREMVKQMKPGSVIVDVAI 269 (371)
T ss_pred eehhHHHHHhcCCCcEEEEEEE
Confidence 7899999999999999998865
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.7e-05 Score=81.46 Aligned_cols=91 Identities=16% Similarity=0.241 Sum_probs=70.5
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCCCcccCcH---H--HH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTGNYHVITH---D--HM 884 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG~~~vi~~---~--~~ 884 (1027)
++|++||.|..|+.+|++|...|.+|.++|+++.+.......|... .++.+++..+|+|+++..+...+.. . .+
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~ 81 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENIL 81 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHG
T ss_pred CEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHh
Confidence 5899999999999999999999999999999998888888888874 5789999999999999876432221 1 45
Q ss_pred hcCCCCeEEEEecCCCc
Q psy15208 885 RDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d~ 901 (1027)
+.+++|.+++|.+..+-
T Consensus 82 ~~l~~g~iiid~sT~~p 98 (163)
T PF03446_consen 82 AGLRPGKIIIDMSTISP 98 (163)
T ss_dssp GGS-TTEEEEE-SS--H
T ss_pred hccccceEEEecCCcch
Confidence 67899999999988643
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=2.1e-05 Score=87.21 Aligned_cols=91 Identities=22% Similarity=0.324 Sum_probs=76.1
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+++.-+.+ .++.+.||+|+|+|-+. +|+-+|..|...||.|++++..- -++.+..++|||||
T Consensus 141 Tp~aii~lL~~-y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T-------------~dl~~~~k~ADIvI 206 (282)
T PRK14180 141 TPKGIMTMLRE-YGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT-------------TDLKSHTTKADILI 206 (282)
T ss_pred CHHHHHHHHHH-hCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCC-------------CCHHHHhhhcCEEE
Confidence 45555554443 47789999999999999 99999999999999999996432 25667789999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 207 sAvGkp~~i~~~~---vk~gavVIDvGin 232 (282)
T PRK14180 207 VAVGKPNFITADM---VKEGAVVIDVGIN 232 (282)
T ss_pred EccCCcCcCCHHH---cCCCcEEEEeccc
Confidence 9999999999764 7999999999974
|
|
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=7.8e-06 Score=93.40 Aligned_cols=93 Identities=22% Similarity=0.225 Sum_probs=73.5
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcCH-----HHH---hc--cCC-EEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVTM-----EYA---KK--YGD-IFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~~-----~e~---l~--~aD-vvi~atG 874 (1027)
..|++|+|.|.|.+|..+++.++.+|++ |++++.++.+...+...|++ +.+. ++. .. ..| ++++|+|
T Consensus 159 ~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~d~~v~d~~G 238 (347)
T PRK10309 159 CEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRFDQLILETAG 238 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCCCeEEEECCC
Confidence 4799999999999999999999999996 78888888888878778874 3221 111 11 356 9999999
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
....+. +.++.|+++|.++.+|....
T Consensus 239 ~~~~~~-~~~~~l~~~G~iv~~G~~~~ 264 (347)
T PRK10309 239 VPQTVE-LAIEIAGPRAQLALVGTLHH 264 (347)
T ss_pred CHHHHH-HHHHHhhcCCEEEEEccCCC
Confidence 876555 45899999999999997643
|
|
| >PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.7e-05 Score=87.76 Aligned_cols=91 Identities=27% Similarity=0.360 Sum_probs=76.7
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCC-hhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYG-DVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G-~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+++.-+. ..+..+.|++|+|+|.+ .+|+.+|..+...|+.|+++..+. .++.+.+++||+||
T Consensus 135 Tp~av~~ll~-~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t-------------~~L~~~~~~ADIvI 200 (279)
T PRK14178 135 TPNGIMTLLH-EYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKT-------------ENLKAELRQADILV 200 (279)
T ss_pred CHHHHHHHHH-HcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecCh-------------hHHHHHHhhCCEEE
Confidence 4555554444 45778999999999999 599999999999999999997543 25678889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 201 ~Avgk~~lv~~~~---vk~GavVIDVgi~ 226 (279)
T PRK14178 201 SAAGKAGFITPDM---VKPGATVIDVGIN 226 (279)
T ss_pred ECCCcccccCHHH---cCCCcEEEEeecc
Confidence 9999889999886 5999999999974
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=98.04 E-value=9.3e-06 Score=92.32 Aligned_cols=92 Identities=21% Similarity=0.237 Sum_probs=74.5
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcCHH--------HHhc--cCCEEEecCCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVTME--------YAKK--YGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~~~--------e~l~--~aDvvi~atG~ 875 (1027)
..|++|+|.|.|.+|..+++.++.+|++ |++++.++.+...+...|++ +.+.. +... ..|++++++|.
T Consensus 162 ~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~d~vid~~g~ 241 (339)
T cd08239 162 SGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGADVAIECSGN 241 (339)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCCCCCEEEECCCC
Confidence 5699999999999999999999999998 99999999888888888874 33211 1122 47999999998
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
...+. ..++.+++++.++.+|..+
T Consensus 242 ~~~~~-~~~~~l~~~G~~v~~g~~~ 265 (339)
T cd08239 242 TAARR-LALEAVRPWGRLVLVGEGG 265 (339)
T ss_pred HHHHH-HHHHHhhcCCEEEEEcCCC
Confidence 76433 4588999999999999753
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=98.04 E-value=3.3e-05 Score=70.77 Aligned_cols=68 Identities=28% Similarity=0.450 Sum_probs=60.0
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhC-CCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHH
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRAL-SAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHD 882 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~-Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~ 882 (1027)
.+..+.+++++|+|+|.+|+.++..+... +.+|.++|+ |++|++++..+.+.++
T Consensus 17 ~~~~~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r-------------------------di~i~~~~~~~~~~~~ 71 (86)
T cd05191 17 TNKSLKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR-------------------------DILVTATPAGVPVLEE 71 (86)
T ss_pred hCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC-------------------------CEEEEcCCCCCCchHH
Confidence 34568999999999999999999999998 568989866 9999999999888887
Q ss_pred HHhcCCCCeEEEEe
Q psy15208 883 HMRDMKDQAIVCNI 896 (1027)
Q Consensus 883 ~~~~mk~gailvNv 896 (1027)
+++.++++.+++++
T Consensus 72 ~~~~~~~~~~v~~~ 85 (86)
T cd05191 72 ATAKINEGAVVIDL 85 (86)
T ss_pred HHHhcCCCCEEEec
Confidence 79999999998865
|
Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al |
| >PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.3e-05 Score=86.88 Aligned_cols=91 Identities=22% Similarity=0.284 Sum_probs=76.2
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+++.-+ +..++.+.||+|+|+|-+. +|+-+|..|...||.|++++.. .-++.+..++|||||
T Consensus 140 Tp~avi~ll-~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~-------------T~nl~~~~~~ADIvI 205 (282)
T PRK14182 140 TPAGVMRML-DEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSR-------------TADLAGEVGRADILV 205 (282)
T ss_pred CHHHHHHHH-HHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC-------------CCCHHHHHhhCCEEE
Confidence 445555444 4447789999999999999 9999999999999999999543 235677889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.++ +|+|++++++|.-
T Consensus 206 ~AvGk~~~i~~~~---ik~gaiVIDvGin 231 (282)
T PRK14182 206 AAIGKAELVKGAW---VKEGAVVIDVGMN 231 (282)
T ss_pred EecCCcCccCHHH---cCCCCEEEEeece
Confidence 9999999999774 7999999999975
|
|
| >cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.04 E-value=3.7e-06 Score=96.19 Aligned_cols=91 Identities=11% Similarity=0.127 Sum_probs=70.2
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHh-CC-CEEEEEcCCchhHHHHhhcCcEEcCHHHHhc--cCCEEEecCCC---cccCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRA-LS-AQVWIIEIDPICALQAAMEGFLVVTMEYAKK--YGDIFVTCTGN---YHVIT 880 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~-~G-a~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~--~aDvvi~atG~---~~vi~ 880 (1027)
..|++|+|+|+|.||..+++.++. +| ++|++++.++.|+..+...+.... .++... ..|++++++|. ...+.
T Consensus 162 ~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~-~~~~~~~~g~d~viD~~G~~~~~~~~~ 240 (341)
T cd08237 162 KDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYL-IDDIPEDLAVDHAFECVGGRGSQSAIN 240 (341)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceee-hhhhhhccCCcEEEECCCCCccHHHHH
Confidence 469999999999999999998886 55 589999999988877776665432 222222 47999999994 33344
Q ss_pred HHHHhcCCCCeEEEEecCCC
Q psy15208 881 HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d 900 (1027)
+.++.|+++|+++.+|...
T Consensus 241 -~~~~~l~~~G~iv~~G~~~ 259 (341)
T cd08237 241 -QIIDYIRPQGTIGLMGVSE 259 (341)
T ss_pred -HHHHhCcCCcEEEEEeecC
Confidence 4589999999999999764
|
NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase ( |
| >PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.3e-05 Score=87.04 Aligned_cols=91 Identities=20% Similarity=0.335 Sum_probs=76.2
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhC----CCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccC
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRAL----SAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYG 866 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~----Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~a 866 (1027)
|-.+++.-+. ..++.+.||+|+|+|-+. +|+-+|..|... +|.|++++..- -++.+.+++|
T Consensus 136 Tp~avi~lL~-~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T-------------~~l~~~~~~A 201 (287)
T PRK14181 136 TPAGIIELLK-YYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQS-------------ENLTEILKTA 201 (287)
T ss_pred CHHHHHHHHH-HhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCC-------------CCHHHHHhhC
Confidence 4555555444 457889999999999999 999999999988 89999996422 2577888999
Q ss_pred CEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 867 DIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
||||.|+|.+++++.++ +|+|++++++|..
T Consensus 202 DIvV~AvG~p~~i~~~~---ik~GavVIDvGin 231 (287)
T PRK14181 202 DIIIAAIGVPLFIKEEM---IAEKAVIVDVGTS 231 (287)
T ss_pred CEEEEccCCcCccCHHH---cCCCCEEEEeccc
Confidence 99999999999999774 7999999999975
|
|
| >TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=98.03 E-value=8.1e-06 Score=93.03 Aligned_cols=91 Identities=13% Similarity=0.064 Sum_probs=75.2
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHH-hccCCEEEecCCCcccCcHHHHh
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYA-KKYGDIFVTCTGNYHVITHDHMR 885 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~-l~~aDvvi~atG~~~vi~~~~~~ 885 (1027)
..|++|+|.|.|.+|..+++.++.+|++|++++.++.+...+...|++ +.+..+. ....|++++++|....+. ..++
T Consensus 164 ~~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~~~~~d~~i~~~~~~~~~~-~~~~ 242 (329)
T TIGR02822 164 PPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTPPEPLDAAILFAPAGGLVP-PALE 242 (329)
T ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccCcccceEEEECCCcHHHHH-HHHH
Confidence 579999999999999999999999999999999999999999999986 3332221 234788888887766444 5689
Q ss_pred cCCCCeEEEEecCC
Q psy15208 886 DMKDQAIVCNIGHF 899 (1027)
Q Consensus 886 ~mk~gailvNvG~~ 899 (1027)
.++++|+++.+|..
T Consensus 243 ~l~~~G~~v~~G~~ 256 (329)
T TIGR02822 243 ALDRGGVLAVAGIH 256 (329)
T ss_pred hhCCCcEEEEEecc
Confidence 99999999999974
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized. |
| >PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.5e-05 Score=86.71 Aligned_cols=92 Identities=25% Similarity=0.341 Sum_probs=77.2
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHh--CCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCC
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRA--LSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGD 867 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~--~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aD 867 (1027)
.|-.+++.-+. ..++.+.||+|+|+|-+. +|+-+|..|.. .+|.|++++.. .-++.+.+++||
T Consensus 140 cTp~av~~ll~-~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~-------------T~~l~~~~k~AD 205 (284)
T PRK14193 140 CTPRGIVHLLR-RYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTG-------------TRDLAAHTRRAD 205 (284)
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCC-------------CCCHHHHHHhCC
Confidence 34555555444 457789999999999999 99999999988 79999999653 235788889999
Q ss_pred EEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 868 IFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 868 vvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|||.|+|.+++++.++ +|+|++++++|..
T Consensus 206 IvV~AvGkp~~i~~~~---ik~GavVIDvGin 234 (284)
T PRK14193 206 IIVAAAGVAHLVTADM---VKPGAAVLDVGVS 234 (284)
T ss_pred EEEEecCCcCccCHHH---cCCCCEEEEcccc
Confidence 9999999999999775 7999999999986
|
|
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=98.02 E-value=1e-05 Score=94.64 Aligned_cols=92 Identities=24% Similarity=0.248 Sum_probs=73.8
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcEEcC------HHHHh------ccCCEEEecC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFLVVT------MEYAK------KYGDIFVTCT 873 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~v~~------~~e~l------~~aDvvi~at 873 (1027)
...|++|+|.|.|.||+.+++.++.+|++ |+++|.++.|...|...|++.+. ..+.+ ...|++++++
T Consensus 183 ~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~ 262 (393)
T TIGR02819 183 VGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKDATLPEQIEQILGEPEVDCAVDCV 262 (393)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEEecCCcccHHHHHHHHcCCCCCcEEEECC
Confidence 35799999999999999999999999997 55568888888889999986432 22222 1379999999
Q ss_pred CCcc--------------cCcHHHHhcCCCCeEEEEecCC
Q psy15208 874 GNYH--------------VITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 874 G~~~--------------vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.+. .+. +.++.++++|.++.+|.+
T Consensus 263 G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~i~~~G~~ 301 (393)
T TIGR02819 263 GFEARGHGHDGKKEAPATVLN-SLMEVTRVGGAIGIPGLY 301 (393)
T ss_pred CCccccccccccccchHHHHH-HHHHHhhCCCEEEEeeec
Confidence 9862 444 458999999999999987
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.1e-05 Score=88.10 Aligned_cols=91 Identities=25% Similarity=0.244 Sum_probs=75.5
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEc-CCchhHHHHhhcCcEEcCHHHHhccCCE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIE-IDPICALQAAMEGFLVVTMEYAKKYGDI 868 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d-~dp~r~~~A~~~G~~v~~~~e~l~~aDv 868 (1027)
.|-.+++.-+. ..+..+.||+|+|+| -|-+|+.+|..|...|+.|++++ +.+ ++++++++||+
T Consensus 140 cTp~ai~~ll~-~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~--------------~l~e~~~~ADI 204 (296)
T PRK14188 140 CTPLGCMMLLR-RVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR--------------DLPAVCRRADI 204 (296)
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC--------------CHHHHHhcCCE
Confidence 34556665444 447789999999999 77899999999999999999995 433 36778899999
Q ss_pred EEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 869 FVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 869 vi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
||+++|.++.+.... +|+|++++++|..
T Consensus 205 VIsavg~~~~v~~~~---lk~GavVIDvGin 232 (296)
T PRK14188 205 LVAAVGRPEMVKGDW---IKPGATVIDVGIN 232 (296)
T ss_pred EEEecCChhhcchhe---ecCCCEEEEcCCc
Confidence 999999999888653 8999999999985
|
|
| >PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=2.3e-05 Score=87.00 Aligned_cols=92 Identities=24% Similarity=0.300 Sum_probs=77.2
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHh----CCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhcc
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRA----LSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKY 865 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~----~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~ 865 (1027)
.|-.+++.-+.+ .++.+.||+|+|+|-+. +|+-+|..|.. .+|+|+++..+. .++.+.+++
T Consensus 139 cTp~av~~lL~~-~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t-------------~~l~~~~~~ 204 (286)
T PRK14184 139 CTPAGVMTLLER-YGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRT-------------PDLAEECRE 204 (286)
T ss_pred CCHHHHHHHHHH-hCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCc-------------hhHHHHHHh
Confidence 345555554444 47889999999999999 99999999998 899999997543 357788899
Q ss_pred CCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 866 GDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 866 aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
||+||.|+|.+++++.+++ |+|++++++|.-
T Consensus 205 ADIVI~AvG~p~li~~~~v---k~GavVIDVGi~ 235 (286)
T PRK14184 205 ADFLFVAIGRPRFVTADMV---KPGAVVVDVGIN 235 (286)
T ss_pred CCEEEEecCCCCcCCHHHc---CCCCEEEEeeee
Confidence 9999999999999998764 999999999975
|
|
| >PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=3.3e-05 Score=85.98 Aligned_cols=92 Identities=22% Similarity=0.325 Sum_probs=76.0
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhC----CCEEEEEcCCchhHHHHhhcCcEEcCHHHHhcc
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRAL----SAQVWIIEIDPICALQAAMEGFLVVTMEYAKKY 865 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~----Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~ 865 (1027)
.|-.++..-+. ..++.+.||+|+|+|.+. +|+-+|..|... +|.|+++...- -++.+..++
T Consensus 139 cTp~av~~lL~-~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T-------------~nl~~~~~~ 204 (293)
T PRK14185 139 ATPNGILELLK-RYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRS-------------KNLKKECLE 204 (293)
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCC-------------CCHHHHHhh
Confidence 34555554444 447789999999999999 999999999887 79999995432 356778899
Q ss_pred CCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 866 GDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 866 aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|||||.|+|.+++++.+ ++|+|++++++|..
T Consensus 205 ADIvIsAvGkp~~i~~~---~vk~gavVIDvGin 235 (293)
T PRK14185 205 ADIIIAALGQPEFVKAD---MVKEGAVVIDVGTT 235 (293)
T ss_pred CCEEEEccCCcCccCHH---HcCCCCEEEEecCc
Confidence 99999999999999976 47999999999984
|
|
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=3e-05 Score=86.15 Aligned_cols=92 Identities=27% Similarity=0.373 Sum_probs=76.0
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.++..-+ +..++.+.||+|+|+|. |-+|+.+|..|...|+.|+++...- -++.+.+++||+|
T Consensus 140 cTp~avi~lL-~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t-------------~~l~~~~~~ADIV 205 (284)
T PRK14179 140 CTPAGIMEMF-REYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRT-------------RNLAEVARKADIL 205 (284)
T ss_pred CCHHHHHHHH-HHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCC-------------CCHHHHHhhCCEE
Confidence 3455555444 44577899999999999 8899999999999999999993211 2577888999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.++|.++.+..+. +|+|++++++|..
T Consensus 206 I~avg~~~~v~~~~---ik~GavVIDvgin 232 (284)
T PRK14179 206 VVAIGRGHFVTKEF---VKEGAVVIDVGMN 232 (284)
T ss_pred EEecCccccCCHHH---ccCCcEEEEecce
Confidence 99999999998764 8999999999975
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=97.98 E-value=2.9e-05 Score=84.34 Aligned_cols=124 Identities=19% Similarity=0.153 Sum_probs=79.4
Q ss_pred ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCC----cEEEEEcCCCCCCCC--CC------
Q psy15208 15 GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLG----YISIRMNFRGVGASS--GT------ 82 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~G----y~Vla~DlrGhG~S~--g~------ 82 (1027)
......+|.|++....++.|+|+++||. .+.............+.+.| ..+++++..+.+... ..
T Consensus 6 ~~~~~~VylP~~y~~~~~~PvlylldG~---~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~ 82 (251)
T PF00756_consen 6 RDRRVWVYLPPGYDPSKPYPVLYLLDGQ---SGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSS 82 (251)
T ss_dssp EEEEEEEEECTTGGTTTTEEEEEEESHT---THHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTT
T ss_pred CeEEEEEEECCCCCCCCCCEEEEEccCC---ccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccc
Confidence 3567788889875445678999999995 11211222333444444543 456666765555111 00
Q ss_pred -CCCc----cchHHHH-HHHHHHHHHhCCCCc--EEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 83 -YDSG----NGETDDM-EILLRYIQKKYPYLP--IILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 83 -~~~~----~~~~~Dv-~avl~~L~~~~~~~p--viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
.... ......+ .+++.++...++..+ ..+.|+||||..|+.++.++|+ .+.++++++|.
T Consensus 83 ~~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd--~F~~~~~~S~~ 149 (251)
T PF00756_consen 83 RRADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPD--LFGAVIAFSGA 149 (251)
T ss_dssp CBCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTT--TESEEEEESEE
T ss_pred cccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcc--ccccccccCcc
Confidence 0011 1122222 467778888776433 6999999999999999999999 79999999976
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00026 Score=80.26 Aligned_cols=119 Identities=16% Similarity=0.208 Sum_probs=84.4
Q ss_pred EEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC------CC-----
Q psy15208 17 LHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY------DS----- 85 (1027)
Q Consensus 17 I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~------~~----- 85 (1027)
-+..+..|+.. ..+.+|++|.++|-+.++ .+ .+..-++..|.++|+..+.+..|-||...... ..
T Consensus 77 a~~~~~~P~~~-~~~~rp~~IhLagTGDh~-f~--rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~ 152 (348)
T PF09752_consen 77 ARFQLLLPKRW-DSPYRPVCIHLAGTGDHG-FW--RRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLF 152 (348)
T ss_pred eEEEEEECCcc-ccCCCceEEEecCCCccc-hh--hhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHH
Confidence 34445557642 124589999999965432 11 11223488899999999999999999865311 11
Q ss_pred --ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 86 --GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 86 --~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
....+.+...++.|+..+ +..++.+.|.||||.+|.+++...|. .+..+-.+++
T Consensus 153 ~~g~~~i~E~~~Ll~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~p~--pv~~vp~ls~ 208 (348)
T PF09752_consen 153 VMGRATILESRALLHWLERE-GYGPLGLTGISMGGHMAALAASNWPR--PVALVPCLSW 208 (348)
T ss_pred HHHhHHHHHHHHHHHHHHhc-CCCceEEEEechhHhhHHhhhhcCCC--ceeEEEeecc
Confidence 123577888999999988 66699999999999999999999987 5555555554
|
|
| >KOG1515|consensus | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00012 Score=83.50 Aligned_cols=128 Identities=18% Similarity=0.155 Sum_probs=92.0
Q ss_pred CCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHH-HhCCcEEEEEcCCCCCCCCCCCCCccchHH
Q psy15208 13 SVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVM-LSLGYISIRMNFRGVGASSGTYDSGNGETD 91 (1027)
Q Consensus 13 ~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~L-a~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~ 91 (1027)
+.+.+.+++|.|.........|++||+||+|+--|+.....+..+...+ .+.+..|+.+|||- ++.+ .+....+
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL---APEh--~~Pa~y~ 144 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL---APEH--PFPAAYD 144 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc---CCCC--CCCccch
Confidence 3447899999998643335789999999988877765555677777776 44589999999994 3322 1223456
Q ss_pred HHHHHHHHHHHh------CCCCcEEEEEechhHHHHHHHHHhcC----CcCCccEEEEEccCCC
Q psy15208 92 DMEILLRYIQKK------YPYLPIILAGFSFGTFVQAKLQKRLD----KEISIKILILISVAVK 145 (1027)
Q Consensus 92 Dv~avl~~L~~~------~~~~pviLVGhSmGG~vAl~~A~~~p----~~~~V~gLVli~p~~~ 145 (1027)
|...++.|+..+ .+-.+++|+|-|.||.+|..++.+.- ...++++.|++.|...
T Consensus 145 D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 145 DGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred HHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 666666666552 23456999999999999988887643 2357899999999764
|
|
| >PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=4.3e-05 Score=85.40 Aligned_cols=91 Identities=22% Similarity=0.260 Sum_probs=75.2
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhC----CCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccC
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRAL----SAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYG 866 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~----Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~a 866 (1027)
|-.+++.-+ +..++.+.||+|+|+|-+. +|+-+|..|... +|.|+++...- -++.+..++|
T Consensus 140 Tp~avi~lL-~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T-------------~~l~~~~~~A 205 (297)
T PRK14167 140 TPHGIQKLL-AAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRT-------------DDLAAKTRRA 205 (297)
T ss_pred CHHHHHHHH-HHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCC-------------CCHHHHHhhC
Confidence 455555444 3447789999999999999 999999999877 89999995432 2567788999
Q ss_pred CEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 867 DIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
||||.|+|.+++++.++ +|+|++++++|.-
T Consensus 206 DIvIsAvGkp~~i~~~~---ik~gaiVIDvGin 235 (297)
T PRK14167 206 DIVVAAAGVPELIDGSM---LSEGATVIDVGIN 235 (297)
T ss_pred CEEEEccCCcCccCHHH---cCCCCEEEEcccc
Confidence 99999999999999764 7999999999974
|
|
| >COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.93 E-value=2.7e-05 Score=85.58 Aligned_cols=91 Identities=24% Similarity=0.298 Sum_probs=76.5
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+.+.- .+..+..+.||+|+|+|-+. +|+-+++.|...+|.|++++..- -++.+..++|||+|
T Consensus 139 Tp~gi~~l-l~~~~i~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T-------------~~l~~~~k~ADIvv 204 (283)
T COG0190 139 TPAGIMTL-LEEYGIDLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRT-------------KDLASITKNADIVV 204 (283)
T ss_pred CHHHHHHH-HHHhCCCCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCC-------------CCHHHHhhhCCEEE
Confidence 44555544 44457789999999999999 89999999999999999996542 35677789999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|-++++..+ ++|+|++++.+|.-
T Consensus 205 ~AvG~p~~i~~d---~vk~gavVIDVGin 230 (283)
T COG0190 205 VAVGKPHFIKAD---MVKPGAVVIDVGIN 230 (283)
T ss_pred EecCCccccccc---cccCCCEEEecCCc
Confidence 999999999965 57999999999986
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.93 E-value=3.4e-05 Score=90.98 Aligned_cols=98 Identities=19% Similarity=0.235 Sum_probs=75.7
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCC-CEEEEEcCCchhHH-HHhhcCcEEc---CHHHHhccCCEEEecCCCc-ccCc
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALS-AQVWIIEIDPICAL-QAAMEGFLVV---TMEYAKKYGDIFVTCTGNY-HVIT 880 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~G-a~ViV~d~dp~r~~-~A~~~G~~v~---~~~e~l~~aDvvi~atG~~-~vi~ 880 (1027)
.+.|++|+|+|+|.+|+.+++.++..| .+|+++++++.++. .+...|.... ++.+++..+|+||+|||.+ .+++
T Consensus 177 ~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aDvVi~aT~s~~~ii~ 256 (417)
T TIGR01035 177 SLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEADIVISSTGAPHPIVS 256 (417)
T ss_pred CccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCCEEEECCCCCCceEc
Confidence 378999999999999999999999999 58999999987755 4555565433 3556678999999999865 5788
Q ss_pred HHHHhcCC----CCeEEEEecCCCcccch
Q psy15208 881 HDHMRDMK----DQAIVCNIGHFDNEIEV 905 (1027)
Q Consensus 881 ~~~~~~mk----~gailvNvG~~d~eid~ 905 (1027)
.++++.+. ...++++++.. .++|.
T Consensus 257 ~e~l~~~~~~~~~~~~viDla~P-rdid~ 284 (417)
T TIGR01035 257 KEDVERALRERTRPLFIIDIAVP-RDVDP 284 (417)
T ss_pred HHHHHHHHhcCCCCeEEEEeCCC-CCCCh
Confidence 88887652 24588899854 44443
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=4.1e-05 Score=85.49 Aligned_cols=91 Identities=21% Similarity=0.302 Sum_probs=75.4
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhC----CCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccC
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRAL----SAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYG 866 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~----Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~a 866 (1027)
|-.++..-+ +..++.+.||+|+|+|-+. +|+-+|..|... +|.|+++...- -++.+..++|
T Consensus 144 Tp~avi~lL-~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T-------------~~l~~~~~~A 209 (297)
T PRK14168 144 TPAGIQEML-VRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRS-------------KNLARHCQRA 209 (297)
T ss_pred CHHHHHHHH-HHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCC-------------cCHHHHHhhC
Confidence 445555444 3457889999999999999 999999999987 79999995432 3577788999
Q ss_pred CEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 867 DIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
||||.|+|.+++++.++ +|+|++++++|.-
T Consensus 210 DIvVsAvGkp~~i~~~~---ik~gavVIDvGin 239 (297)
T PRK14168 210 DILIVAAGVPNLVKPEW---IKPGATVIDVGVN 239 (297)
T ss_pred CEEEEecCCcCccCHHH---cCCCCEEEecCCC
Confidence 99999999999999774 7999999999974
|
|
| >TIGR00465 ilvC ketol-acid reductoisomerase | Back alignment and domain information |
|---|
Probab=97.92 E-value=4e-05 Score=86.93 Aligned_cols=91 Identities=24% Similarity=0.262 Sum_probs=69.2
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEc-CCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCc---ccCcHHH
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIE-IDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNY---HVITHDH 883 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d-~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~---~vi~~~~ 883 (1027)
|.||+|+|||+|.+|.++|+.++..|.+|++++ .++.+...+...|+.+.+..+++..+|+|+.++... ..+.++.
T Consensus 1 l~~kkIgiIG~G~mG~AiA~~L~~sG~~Viv~~~~~~~~~~~a~~~Gv~~~s~~ea~~~ADiVvLaVpp~~~~~~v~~ei 80 (314)
T TIGR00465 1 LKGKTVAIIGYGSQGHAQALNLRDSGLNVIVGLRKGGASWKKATEDGFKVGTVEEAIPQADLIMNLLPDEVQHEVYEAEI 80 (314)
T ss_pred CCcCEEEEEeEcHHHHHHHHHHHHCCCeEEEEECcChhhHHHHHHCCCEECCHHHHHhcCCEEEEeCCcHhHHHHHHHHH
Confidence 579999999999999999999999999987754 434445556678998888888899999999988654 2233344
Q ss_pred HhcCCCCeEEEEecCC
Q psy15208 884 MRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~ 899 (1027)
...|+++.+ +.+.|.
T Consensus 81 ~~~l~~g~i-Vs~aaG 95 (314)
T TIGR00465 81 QPLLKEGKT-LGFSHG 95 (314)
T ss_pred HhhCCCCcE-EEEeCC
Confidence 566888864 444443
|
This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway |
| >PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=4.5e-05 Score=85.27 Aligned_cols=91 Identities=23% Similarity=0.316 Sum_probs=75.7
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHh----CCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccC
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRA----LSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYG 866 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~----~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~a 866 (1027)
|-.+++.-+. ..++.+.||+|+|+|-+. +|+-+|..|.. .|+.|+++..+. .++.+.+++|
T Consensus 142 Tp~ail~ll~-~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t-------------~~l~~~~~~A 207 (295)
T PRK14174 142 TPYGILELLG-RYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSAT-------------KDIPSYTRQA 207 (295)
T ss_pred CHHHHHHHHH-HhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCc-------------hhHHHHHHhC
Confidence 4555554444 447789999999999999 99999999887 689999996543 2467888999
Q ss_pred CEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 867 DIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|+||.|+|.+++++.+++ |+|++++++|.-
T Consensus 208 DIvI~Avg~~~li~~~~v---k~GavVIDVgi~ 237 (295)
T PRK14174 208 DILIAAIGKARFITADMV---KPGAVVIDVGIN 237 (295)
T ss_pred CEEEEecCccCccCHHHc---CCCCEEEEeecc
Confidence 999999999999998865 999999999974
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.91 E-value=4.5e-05 Score=90.12 Aligned_cols=93 Identities=17% Similarity=0.199 Sum_probs=74.4
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHH-HHhhcCcEEcC---HHHHhccCCEEEecCCCc-ccCc
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICAL-QAAMEGFLVVT---MEYAKKYGDIFVTCTGNY-HVIT 880 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~-~A~~~G~~v~~---~~e~l~~aDvvi~atG~~-~vi~ 880 (1027)
.+.|++|+|+|+|.+|+.+++.++..|+ +|+++++++.++. .+...|..+.+ +.+.+.++|+||+|||.+ .+++
T Consensus 179 ~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvVI~aT~s~~~~i~ 258 (423)
T PRK00045 179 DLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEADIVISSTGAPHPIIG 258 (423)
T ss_pred CccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccCCEEEECCCCCCcEEc
Confidence 3789999999999999999999999998 8999999987765 45555655443 445677899999999876 5778
Q ss_pred HHHHhcC-----CCCeEEEEecCC
Q psy15208 881 HDHMRDM-----KDQAIVCNIGHF 899 (1027)
Q Consensus 881 ~~~~~~m-----k~gailvNvG~~ 899 (1027)
.+.++.+ ..+.++++++..
T Consensus 259 ~~~l~~~~~~~~~~~~vviDla~P 282 (423)
T PRK00045 259 KGMVERALKARRHRPLLLVDLAVP 282 (423)
T ss_pred HHHHHHHHhhccCCCeEEEEeCCC
Confidence 8877664 246789999864
|
|
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=97.90 E-value=2e-05 Score=91.01 Aligned_cols=91 Identities=23% Similarity=0.237 Sum_probs=73.5
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-------HHHhc-----cCCEEEecC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-------EYAKK-----YGDIFVTCT 873 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-------~e~l~-----~aDvvi~at 873 (1027)
..|++|+|.|.|.||..+++.|+.+|+ +|++++.++.+...+...|++ +.+. .+.+. .+|+|++++
T Consensus 185 ~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~ 264 (368)
T cd08300 185 EPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECI 264 (368)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECC
Confidence 579999999999999999999999999 799999999888888888875 3321 12121 379999999
Q ss_pred CCcccCcHHHHhcCCCC-eEEEEecCC
Q psy15208 874 GNYHVITHDHMRDMKDQ-AIVCNIGHF 899 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~g-ailvNvG~~ 899 (1027)
|....+. +.++.++++ +.++.+|..
T Consensus 265 g~~~~~~-~a~~~l~~~~G~~v~~g~~ 290 (368)
T cd08300 265 GNVKVMR-AALEACHKGWGTSVIIGVA 290 (368)
T ss_pred CChHHHH-HHHHhhccCCCeEEEEccC
Confidence 9765444 458889886 999999976
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.90 E-value=3.3e-05 Score=84.94 Aligned_cols=94 Identities=27% Similarity=0.324 Sum_probs=77.7
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEc-CCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCc---ccCcHH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIE-IDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNY---HVITHD 882 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d-~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~---~vi~~~ 882 (1027)
.|.||+|+|||||.-|++-|..||..|.+|++-= ........|..+||+|.+.+|+++.||+|...++.. .+..++
T Consensus 15 ~LkgK~iaIIGYGsQG~ahalNLRDSGlnViiGlr~g~~s~~kA~~dGf~V~~v~ea~k~ADvim~L~PDe~q~~vy~~~ 94 (338)
T COG0059 15 LLKGKKVAIIGYGSQGHAQALNLRDSGLNVIIGLRKGSSSWKKAKEDGFKVYTVEEAAKRADVVMILLPDEQQKEVYEKE 94 (338)
T ss_pred HhcCCeEEEEecChHHHHHHhhhhhcCCcEEEEecCCchhHHHHHhcCCEeecHHHHhhcCCEEEEeCchhhHHHHHHHH
Confidence 4899999999999999999999999999988753 333446779999999999999999999999877643 455555
Q ss_pred HHhcCCCCeEEEEecCCC
Q psy15208 883 HMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~d 900 (1027)
--..||.|+.|...-.|+
T Consensus 95 I~p~Lk~G~aL~FaHGfN 112 (338)
T COG0059 95 IAPNLKEGAALGFAHGFN 112 (338)
T ss_pred hhhhhcCCceEEeccccc
Confidence 567899999887765554
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.90 E-value=7e-05 Score=75.50 Aligned_cols=106 Identities=18% Similarity=0.148 Sum_probs=76.1
Q ss_pred hHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCC-CEEEEEcCCchhHHH-HhhcCc-----EEcCHHHHhccCC
Q psy15208 795 SLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALS-AQVWIIEIDPICALQ-AAMEGF-----LVVTMEYAKKYGD 867 (1027)
Q Consensus 795 s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~G-a~ViV~d~dp~r~~~-A~~~G~-----~v~~~~e~l~~aD 867 (1027)
++..++.+. +..+.+++++|+|+|.+|+.+++.++..| .+|+++++++.+..+ +...+. ...+.++.+.++|
T Consensus 5 g~~~a~~~~-~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 83 (155)
T cd01065 5 GFVRALEEA-GIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELLAEAD 83 (155)
T ss_pred HHHHHHHhh-CCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhccccCC
Confidence 344444443 44578999999999999999999999996 689999999876554 333342 3556777788999
Q ss_pred EEEecCCCccc-CcHHH--HhcCCCCeEEEEecCCCc
Q psy15208 868 IFVTCTGNYHV-ITHDH--MRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 868 vvi~atG~~~v-i~~~~--~~~mk~gailvNvG~~d~ 901 (1027)
+||+|++.... +.... ...++++.++++++..+.
T Consensus 84 vvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~ 120 (155)
T cd01065 84 LIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPL 120 (155)
T ss_pred EEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCC
Confidence 99999876532 11111 123689999999987654
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00026 Score=80.31 Aligned_cols=109 Identities=17% Similarity=0.120 Sum_probs=72.2
Q ss_pred CccEEEEECCCCCCCCCCCh------HHHHHHH---HHHHhCCcEEEEEcCCCCC-CCCCCC----C------Cc-cchH
Q psy15208 32 LKGVVLIAHPHPLFGGTMDN------KVVQTLV---RVMLSLGYISIRMNFRGVG-ASSGTY----D------SG-NGET 90 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~------~~~~~la---~~La~~Gy~Vla~DlrGhG-~S~g~~----~------~~-~~~~ 90 (1027)
...+||++|++..++-.... .+|..+. +.+.-..|-|++.|..|.+ .|.+.. . .+ .-.+
T Consensus 50 ~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti 129 (368)
T COG2021 50 KDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITI 129 (368)
T ss_pred CCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccH
Confidence 45789999998432111110 0232221 1122245899999999987 444321 1 11 1346
Q ss_pred HHHHHHHHHHHHhCCCCcEE-EEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 91 DDMEILLRYIQKKYPYLPII-LAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 91 ~Dv~avl~~L~~~~~~~pvi-LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
.|...+.+.|.+.++..++. ++|-||||+.++.++..||+ +++.++.++.
T Consensus 130 ~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd--~V~~~i~ia~ 180 (368)
T COG2021 130 RDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPD--RVRRAIPIAT 180 (368)
T ss_pred HHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChH--HHhhhheecc
Confidence 77777777787887877754 99999999999999999999 6888777764
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.83 E-value=9.1e-05 Score=84.08 Aligned_cols=92 Identities=21% Similarity=0.243 Sum_probs=70.6
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhH-HHHhhcCcEEcC---HHHHhccCCEEEecCCCccc--Cc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICA-LQAAMEGFLVVT---MEYAKKYGDIFVTCTGNYHV--IT 880 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~-~~A~~~G~~v~~---~~e~l~~aDvvi~atG~~~v--i~ 880 (1027)
+.|++|+|+|+|.+|+.+++.++..|+ +|+++++++.++ ..|...|..+.+ +.+.+.++|+||+||+.++. +.
T Consensus 176 l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvVi~at~~~~~~~~~ 255 (311)
T cd05213 176 LKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLELLNEADVVISATGAPHYAKIV 255 (311)
T ss_pred ccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHHHhcCCEEEECCCCCchHHHH
Confidence 689999999999999999999999886 799999998765 346666766554 45667789999999998764 12
Q ss_pred HHHHhcC-CCCeEEEEecCC
Q psy15208 881 HDHMRDM-KDQAIVCNIGHF 899 (1027)
Q Consensus 881 ~~~~~~m-k~gailvNvG~~ 899 (1027)
...++.. +.+.++++++..
T Consensus 256 ~~~~~~~~~~~~~viDlavP 275 (311)
T cd05213 256 ERAMKKRSGKPRLIVDLAVP 275 (311)
T ss_pred HHHHhhCCCCCeEEEEeCCC
Confidence 2223333 357789999875
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >KOG0022|consensus | Back alignment and domain information |
|---|
Probab=97.83 E-value=4.6e-05 Score=84.07 Aligned_cols=116 Identities=22% Similarity=0.250 Sum_probs=87.2
Q ss_pred chhhhhhHHHH-HhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH-----
Q psy15208 789 LYGCRESLIDG-IKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME----- 860 (1027)
Q Consensus 789 ~~g~~~s~~~~-i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~----- 860 (1027)
..||+-|+--+ .+...+ .-.|.+++|+|.|.+|+++++-+|+.|| ++|.+|+|+.+...|...|+. .++..
T Consensus 172 LLgCGvsTG~GAa~~~Ak-v~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~ 250 (375)
T KOG0022|consen 172 LLGCGVSTGYGAAWNTAK-VEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLKKP 250 (375)
T ss_pred Eeeccccccchhhhhhcc-cCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhcccc
Confidence 35666554322 222324 4689999999999999999999999999 899999999999999999986 44433
Q ss_pred --HHhc-----cCCEEEecCCCcccCcHHHHhcCCCC-eEEEEecCC--Ccccchh
Q psy15208 861 --YAKK-----YGDIFVTCTGNYHVITHDHMRDMKDQ-AIVCNIGHF--DNEIEVE 906 (1027)
Q Consensus 861 --e~l~-----~aDvvi~atG~~~vi~~~~~~~mk~g-ailvNvG~~--d~eid~~ 906 (1027)
|.+. ..|+-++|+|+.+++. +.|...+.| +.-+-+|.. ..++.+.
T Consensus 251 i~evi~EmTdgGvDysfEc~G~~~~m~-~al~s~h~GwG~sv~iGv~~~~~~i~~~ 305 (375)
T KOG0022|consen 251 IQEVIIEMTDGGVDYSFECIGNVSTMR-AALESCHKGWGKSVVIGVAAAGQEISTR 305 (375)
T ss_pred HHHHHHHHhcCCceEEEEecCCHHHHH-HHHHHhhcCCCeEEEEEecCCCcccccc
Confidence 2222 3799999999999655 558889888 777777775 3444443
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00013 Score=79.45 Aligned_cols=139 Identities=14% Similarity=0.192 Sum_probs=90.3
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCc--EEEEEcCCCCCCCCCCCCC---ccchHHHHHHHHHHHHHhCC
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGY--ISIRMNFRGVGASSGTYDS---GNGETDDMEILLRYIQKKYP 105 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy--~Vla~DlrGhG~S~g~~~~---~~~~~~Dv~avl~~L~~~~~ 105 (1027)
+.+.++||+||+. .+++. .....++.....++ .++.+.+|..|.-.+...+ ......++..+++.|....+
T Consensus 16 ~~~~vlvfVHGyn---~~f~~-a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~ 91 (233)
T PF05990_consen 16 PDKEVLVFVHGYN---NSFED-ALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPG 91 (233)
T ss_pred CCCeEEEEEeCCC---CCHHH-HHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccC
Confidence 3578999999983 23333 22334443333344 7999999988764332211 12234555666666666656
Q ss_pred CCcEEEEEechhHHHHHHHHHhcCCc-------CCccEEEEEccCCCcC-------CCCCCCCcEEEEEeCCCCCCChHH
Q psy15208 106 YLPIILAGFSFGTFVQAKLQKRLDKE-------ISIKILILISVAVKKW-------LIPEVPKNTIIIHGELDEIIPLKD 171 (1027)
Q Consensus 106 ~~pviLVGhSmGG~vAl~~A~~~p~~-------~~V~gLVli~p~~~~~-------~l~~i~~PvLiIhG~~D~iVP~~~ 171 (1027)
..++++++||||+.+.+......... .++..+++.+|..+.. .+.....++.+.+..+|.....+.
T Consensus 92 ~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~~~~~~~~~~~~~itvy~s~~D~AL~~S~ 171 (233)
T PF05990_consen 92 IKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFRSQLPDLGSSARRITVYYSRNDRALKASR 171 (233)
T ss_pred CceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHHHHHHHHhhcCCCEEEEEcCCchHHHHHH
Confidence 67899999999999988876542221 2578999999876532 244556889999999997665554
Q ss_pred HH
Q psy15208 172 VF 173 (1027)
Q Consensus 172 ~~ 173 (1027)
..
T Consensus 172 ~~ 173 (233)
T PF05990_consen 172 RL 173 (233)
T ss_pred HH
Confidence 43
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=97.81 E-value=6.8e-05 Score=90.08 Aligned_cols=126 Identities=18% Similarity=0.106 Sum_probs=82.5
Q ss_pred ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhC--CcEEEEEcCC-CC---CCCCCCCCCccc
Q psy15208 15 GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL--GYISIRMNFR-GV---GASSGTYDSGNG 88 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~--Gy~Vla~Dlr-Gh---G~S~g~~~~~~~ 88 (1027)
.-++.-+|.|......+..|++|++||++...|+.... ....|+.+ ++.|+.+++| |. ..+.........
T Consensus 77 dcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~----~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~ 152 (493)
T cd00312 77 DCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY----PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNY 152 (493)
T ss_pred cCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC----ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcch
Confidence 36777888887522135679999999987666654431 22334433 3999999998 33 222211111223
Q ss_pred hHHHHHHHHHHHHHh---CCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 89 ETDDMEILLRYIQKK---YPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~---~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
-..|...+++|+++. ++. .+|.|+|+|.||..+..++........++++|+.++..
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 478999999999874 333 36999999999999988877632223578888887654
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00014 Score=80.70 Aligned_cols=108 Identities=17% Similarity=0.339 Sum_probs=79.8
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhC---CcEEEEEcCCCCCCCCCC-----CCCccchHHHHHHHHHHHHH--
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL---GYISIRMNFRGVGASSGT-----YDSGNGETDDMEILLRYIQK-- 102 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~---Gy~Vla~DlrGhG~S~g~-----~~~~~~~~~Dv~avl~~L~~-- 102 (1027)
++.++|+.|.+.. -.+|..+.+.|.++ .+.|++..+.||-.++.. .....++-+.++..++++++
T Consensus 2 ~~li~~IPGNPGl-----v~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~ 76 (266)
T PF10230_consen 2 RPLIVFIPGNPGL-----VEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELI 76 (266)
T ss_pred cEEEEEECCCCCh-----HHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHh
Confidence 5789999997532 23677787777744 899999999999877654 12334556666655555554
Q ss_pred -hC--CCCcEEEEEechhHHHHHHHHHhcC-CcCCccEEEEEccCCC
Q psy15208 103 -KY--PYLPIILAGFSFGTFVQAKLQKRLD-KEISIKILILISVAVK 145 (1027)
Q Consensus 103 -~~--~~~pviLVGhSmGG~vAl~~A~~~p-~~~~V~gLVli~p~~~ 145 (1027)
.. +..+++|+|||+|+++++.+..+.+ ...+|.+++++-|...
T Consensus 77 ~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 77 PQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred hhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 32 4567999999999999999999998 2337899999988753
|
|
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.80 E-value=3.9e-05 Score=88.62 Aligned_cols=92 Identities=23% Similarity=0.279 Sum_probs=74.0
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-------HHHhc-----cCCEEEecC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-------EYAKK-----YGDIFVTCT 873 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-------~e~l~-----~aDvvi~at 873 (1027)
..|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|++ +.+. .+.+. ..|++++++
T Consensus 186 ~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~ 265 (369)
T cd08301 186 KKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECT 265 (369)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHHhCCCCCEEEECC
Confidence 579999999999999999999999999 899999999888888888875 3321 12221 379999999
Q ss_pred CCcccCcHHHHhcCCCC-eEEEEecCCC
Q psy15208 874 GNYHVITHDHMRDMKDQ-AIVCNIGHFD 900 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~g-ailvNvG~~d 900 (1027)
|....+. ..+..++++ ++++.+|...
T Consensus 266 G~~~~~~-~~~~~~~~~~g~~v~~g~~~ 292 (369)
T cd08301 266 GNIDAMI-SAFECVHDGWGVTVLLGVPH 292 (369)
T ss_pred CChHHHH-HHHHHhhcCCCEEEEECcCC
Confidence 8765444 458889996 9999999764
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.80 E-value=4.2e-05 Score=88.35 Aligned_cols=93 Identities=17% Similarity=0.202 Sum_probs=74.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-------HHHh-----ccCCEEEec
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-------EYAK-----KYGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-------~e~l-----~~aDvvi~a 872 (1027)
...|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|++ +.+. .+.+ ...|+|+++
T Consensus 182 ~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~ 261 (365)
T cd08277 182 VEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFEC 261 (365)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccccchHHHHHHHHhCCCCCEEEEC
Confidence 4679999999999999999999999999 799999999888888888874 3221 1222 148999999
Q ss_pred CCCcccCcHHHHhcCCCC-eEEEEecCCC
Q psy15208 873 TGNYHVITHDHMRDMKDQ-AIVCNIGHFD 900 (1027)
Q Consensus 873 tG~~~vi~~~~~~~mk~g-ailvNvG~~d 900 (1027)
+|....+. +.++.|+++ +.++.+|..+
T Consensus 262 ~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 289 (365)
T cd08277 262 TGNADLMN-EALESTKLGWGVSVVVGVPP 289 (365)
T ss_pred CCChHHHH-HHHHhcccCCCEEEEEcCCC
Confidence 99765444 458889875 9999999863
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00035 Score=81.92 Aligned_cols=103 Identities=14% Similarity=0.110 Sum_probs=64.3
Q ss_pred CccEEEEE----CCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCC
Q psy15208 32 LKGVVLIA----HPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYL 107 (1027)
Q Consensus 32 ~~pvVVll----HG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~ 107 (1027)
.+|+||+= ||-+ .+|.+.+ ..+...|. .|+.||.+.+.-.-... .+......-...+++.+....|..
T Consensus 68 krP~vViDPRAGHGpG-IGGFK~d---SevG~AL~-~GHPvYFV~F~p~P~pg---QTl~DV~~ae~~Fv~~V~~~hp~~ 139 (581)
T PF11339_consen 68 KRPFVVIDPRAGHGPG-IGGFKPD---SEVGVALR-AGHPVYFVGFFPEPEPG---QTLEDVMRAEAAFVEEVAERHPDA 139 (581)
T ss_pred CCCeEEeCCCCCCCCC-ccCCCcc---cHHHHHHH-cCCCeEEEEecCCCCCC---CcHHHHHHHHHHHHHHHHHhCCCC
Confidence 45655543 4422 2444432 34556665 49999999885211111 122222223345566666666654
Q ss_pred -cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 108 -PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 108 -pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
+..|+|.|+||+.++++|+.+|+ .+.-+|+.+++.
T Consensus 140 ~kp~liGnCQgGWa~~mlAA~~Pd--~~gplvlaGaPl 175 (581)
T PF11339_consen 140 PKPNLIGNCQGGWAAMMLAALRPD--LVGPLVLAGAPL 175 (581)
T ss_pred CCceEEeccHHHHHHHHHHhcCcC--ccCceeecCCCc
Confidence 78999999999999999999999 677777777653
|
Their function is unknown. |
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.78 E-value=5.3e-05 Score=89.04 Aligned_cols=150 Identities=13% Similarity=0.077 Sum_probs=98.2
Q ss_pred ccCCEEEEEc-CChhHHHHHHHHHhCCC---EEEEEcCCchhHHHHhhc--------CcE--EcC------HHHHh----
Q psy15208 808 IAGKIAVIIG-YGDVGKGSAQAMRALSA---QVWIIEIDPICALQAAME--------GFL--VVT------MEYAK---- 863 (1027)
Q Consensus 808 l~Gk~VvViG-~G~IG~~vA~~a~~~Ga---~ViV~d~dp~r~~~A~~~--------G~~--v~~------~~e~l---- 863 (1027)
..|++|+|+| .|.||..+++.++.+|+ +|+++|.++.|...+... |++ +.+ ..+.+
T Consensus 174 ~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t 253 (410)
T cd08238 174 KPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELT 253 (410)
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHh
Confidence 4789999998 69999999999999864 799999999888887775 654 232 11222
Q ss_pred --ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEe-cCCC----cccchhhhhccceeccccceeeeecCC-CcEEEEec
Q psy15208 864 --KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNI-GHFD----NEIEVEKLKKYKWENIKPQVDHIIFPD-GKKIILLA 935 (1027)
Q Consensus 864 --~~aDvvi~atG~~~vi~~~~~~~mk~gailvNv-G~~d----~eid~~~l~~~~~~~~~~~v~~y~~~d-g~~i~LLa 935 (1027)
..+|++++++|....+. ..++.+++++.++.+ |..+ ..+++..+...+........ ....+ .+.+.+++
T Consensus 254 ~g~g~D~vid~~g~~~~~~-~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~~~~li~ 330 (410)
T cd08238 254 GGQGFDDVFVFVPVPELVE-EADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSG--GNTDDMKEAIDLMA 330 (410)
T ss_pred CCCCCCEEEEcCCCHHHHH-HHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCC--CCHHHHHHHHHHHH
Confidence 14799999998776555 458889977766555 4322 23443322211111111111 11111 35777888
Q ss_pred CCccccccCCCCCCcceEehhhHhHHHHHHHHh
Q psy15208 936 EGRLVNLGCGTGHPSYVMSSSFANQTLAQIELF 968 (1027)
Q Consensus 936 ~GrlvNl~~~~G~P~~vmd~sf~~q~la~~~l~ 968 (1027)
+|++ +|..+++..|.+..+...+-.
T Consensus 331 ~g~i--------~~~~~it~~~~l~~~~~A~~~ 355 (410)
T cd08238 331 AGKL--------NPARMVTHIGGLNAAAETTLN 355 (410)
T ss_pred cCCC--------chhhcEEEEecHHHHHHHHHH
Confidence 8888 677788988988887776655
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00036 Score=82.13 Aligned_cols=123 Identities=11% Similarity=0.038 Sum_probs=78.7
Q ss_pred ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCc----EEEEEcCCCCCCCCCCCCCccchH
Q psy15208 15 GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGY----ISIRMNFRGVGASSGTYDSGNGET 90 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy----~Vla~DlrGhG~S~g~~~~~~~~~ 90 (1027)
.+..+++|.|++.. .++.|+|+++||..+.. ..........|.++|. .++.+|..........++....+.
T Consensus 192 ~~r~v~VY~P~~y~-~~~~PvlyllDG~~w~~----~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~ 266 (411)
T PRK10439 192 NSRRVWIYTTGDAA-PEERPLAILLDGQFWAE----SMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFW 266 (411)
T ss_pred CceEEEEEECCCCC-CCCCCEEEEEECHHhhh----cCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHH
Confidence 35677888887643 35689999999964321 1123345556666663 357777632211111222212223
Q ss_pred HHH-HHHHHHHHHhCCC----CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 91 DDM-EILLRYIQKKYPY----LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 91 ~Dv-~avl~~L~~~~~~----~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
..+ .+++-++.+.++. .+.+|.|+||||..|+.++.++|+ .+.+++..++..
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd--~Fg~v~s~Sgs~ 323 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPE--RFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcc--cccEEEEeccce
Confidence 332 4566666666543 358999999999999999999999 789999999864
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=97.72 E-value=9.5e-05 Score=82.91 Aligned_cols=89 Identities=15% Similarity=0.185 Sum_probs=72.1
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCCCcccCc------HHHH
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTGNYHVIT------HDHM 884 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG~~~vi~------~~~~ 884 (1027)
+|+|||+|.+|..+|..+...|.+|+++|+++.+...+...|.. ..+..+++.++|+||.|......+. ...+
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~~~~~~v~~~~~~~~ 80 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDSPQVEEVAFGENGII 80 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcchHh
Confidence 48999999999999999999999999999999887777777775 4467888999999999887542221 1235
Q ss_pred hcCCCCeEEEEecCCC
Q psy15208 885 RDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d 900 (1027)
..++++.+++|++...
T Consensus 81 ~~~~~g~iivd~st~~ 96 (291)
T TIGR01505 81 EGAKPGKTLVDMSSIS 96 (291)
T ss_pred hcCCCCCEEEECCCCC
Confidence 6789999999987764
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PLN02514 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00011 Score=84.69 Aligned_cols=93 Identities=18% Similarity=0.187 Sum_probs=71.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH-hhcCcE-EcC------HHHHhccCCEEEecCCCccc
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA-AMEGFL-VVT------MEYAKKYGDIFVTCTGNYHV 878 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A-~~~G~~-v~~------~~e~l~~aDvvi~atG~~~v 878 (1027)
...|++|+|.|.|.+|..+++.++.+|++|++++.++.+...+ ...|++ +.. +.+.....|++++++|....
T Consensus 178 ~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~D~vid~~g~~~~ 257 (357)
T PLN02514 178 KQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSLDYIIDTVPVFHP 257 (357)
T ss_pred CCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcCCCcEEEECCCchHH
Confidence 3579999999999999999999999999998887777655444 447775 221 11122347999999997654
Q ss_pred CcHHHHhcCCCCeEEEEecCCC
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~d 900 (1027)
+. ..++.+++++.++.+|...
T Consensus 258 ~~-~~~~~l~~~G~iv~~G~~~ 278 (357)
T PLN02514 258 LE-PYLSLLKLDGKLILMGVIN 278 (357)
T ss_pred HH-HHHHHhccCCEEEEECCCC
Confidence 44 4589999999999999764
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00019 Score=82.50 Aligned_cols=108 Identities=20% Similarity=0.175 Sum_probs=76.3
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchH-HHHHHHHHHHHHhCCCCcEEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGET-DDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~-~Dv~avl~~L~~~~~~~pviL 111 (1027)
+++++++|.+--..=-++-..-.++...|.++|..|+.+++++=..+.+.. .++... +.+...++.+.+..+.+.+.+
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~-~~edYi~e~l~~aid~v~~itg~~~Inl 185 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAK-NLEDYILEGLSEAIDTVKDITGQKDINL 185 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhc-cHHHHHHHHHHHHHHHHHHHhCccccce
Confidence 456789998521000000011246889999999999999998766655432 333333 667777788877777778999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+|+|+||.+...+++.++.+ +++.++++..
T Consensus 186 iGyCvGGtl~~~ala~~~~k-~I~S~T~lts 215 (445)
T COG3243 186 IGYCVGGTLLAAALALMAAK-RIKSLTLLTS 215 (445)
T ss_pred eeEecchHHHHHHHHhhhhc-ccccceeeec
Confidence 99999999999999988874 5888887764
|
|
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00029 Score=76.36 Aligned_cols=95 Identities=20% Similarity=0.188 Sum_probs=74.0
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCC---EEEEEcCC----chhH--------HHHhhcCc-EE-cCHHHHhccC
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSA---QVWIIEID----PICA--------LQAAMEGF-LV-VTMEYAKKYG 866 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga---~ViV~d~d----p~r~--------~~A~~~G~-~v-~~~~e~l~~a 866 (1027)
.+..+.+++|+|+|+|..|+++|..+...|+ +|.++|++ ..|. ..+...+. .. .++.+++.++
T Consensus 19 ~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~~~~~l~~~l~~~ 98 (226)
T cd05311 19 VGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEKTGGTLKEALKGA 98 (226)
T ss_pred hCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCcccCCHHHHHhcC
Confidence 4556899999999999999999999999998 49999998 3332 12333321 11 3577888899
Q ss_pred CEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 867 DIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|++|.+|+ .++++.+.++.|+++.++......
T Consensus 99 dvlIgaT~-~G~~~~~~l~~m~~~~ivf~lsnP 130 (226)
T cd05311 99 DVFIGVSR-PGVVKKEMIKKMAKDPIVFALANP 130 (226)
T ss_pred CEEEeCCC-CCCCCHHHHHhhCCCCEEEEeCCC
Confidence 99999998 788999999999988887766543
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00021 Score=83.17 Aligned_cols=93 Identities=20% Similarity=0.233 Sum_probs=76.3
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHH-HhhcCcEEcCHHH---HhccCCEEEecCCCc-ccCc
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQ-AAMEGFLVVTMEY---AKKYGDIFVTCTGNY-HVIT 880 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~-A~~~G~~v~~~~e---~l~~aDvvi~atG~~-~vi~ 880 (1027)
.|.+++|+|+|+|-+|..+|+.|...|. +|+|+.++..|+.+ |...|..+.++++ .+.++||||++||.+ .+++
T Consensus 175 ~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~l~~~DvVissTsa~~~ii~ 254 (414)
T COG0373 175 SLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLEALAEADVVISSTSAPHPIIT 254 (414)
T ss_pred ccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHhhhhCCEEEEecCCCccccC
Confidence 4899999999999999999999999996 89999999988774 8888988777665 467899999999876 5777
Q ss_pred HHHHhcC-CC--CeEEEEecCC
Q psy15208 881 HDHMRDM-KD--QAIVCNIGHF 899 (1027)
Q Consensus 881 ~~~~~~m-k~--gailvNvG~~ 899 (1027)
.+.+... +. .=++++++.+
T Consensus 255 ~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 255 REMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred HHHHHHHHhcccCeEEEEecCC
Confidence 7766543 22 2478888886
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00017 Score=80.92 Aligned_cols=91 Identities=15% Similarity=0.183 Sum_probs=73.6
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCCCcc----cCc--HHH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTGNYH----VIT--HDH 883 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG~~~----vi~--~~~ 883 (1027)
++|+|+|.|.+|..+|+.++..|.+|+++|+++.+...+...|..+ .+.++++.++|+||.++.... ++. ...
T Consensus 3 ~~IgviG~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~~~~~~v~~~~~~~ 82 (296)
T PRK11559 3 MKVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNSPHVKEVALGENGI 82 (296)
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHcCcchH
Confidence 4799999999999999999999999999999998777667777764 467888899999999886542 221 123
Q ss_pred HhcCCCCeEEEEecCCCc
Q psy15208 884 MRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d~ 901 (1027)
+..+++|.+++|++....
T Consensus 83 ~~~~~~g~iiid~st~~~ 100 (296)
T PRK11559 83 IEGAKPGTVVIDMSSIAP 100 (296)
T ss_pred hhcCCCCcEEEECCCCCH
Confidence 567899999999988753
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00017 Score=86.84 Aligned_cols=92 Identities=13% Similarity=0.128 Sum_probs=72.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHh-hc-CcE--Ec---CHHHHhccCCEEEecCCCc-cc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAA-ME-GFL--VV---TMEYAKKYGDIFVTCTGNY-HV 878 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~-~~-G~~--v~---~~~e~l~~aDvvi~atG~~-~v 878 (1027)
+.+++|+|+|+|.+|+.+++.|...|+ +|+++++++.++.... .. |.. +. ++.+++.++|+||+||+.. .+
T Consensus 264 l~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s~~pv 343 (519)
T PLN00203 264 HASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSSETPL 343 (519)
T ss_pred CCCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCCCCCe
Confidence 789999999999999999999999998 7999999987765433 22 332 22 3556778999999999764 58
Q ss_pred CcHHHHhcCCCC-------eEEEEecCC
Q psy15208 879 ITHDHMRDMKDQ-------AIVCNIGHF 899 (1027)
Q Consensus 879 i~~~~~~~mk~g-------ailvNvG~~ 899 (1027)
+..++++.++++ -++++++..
T Consensus 344 I~~e~l~~~~~~~~~~~~~~~~IDLAvP 371 (519)
T PLN00203 344 FLKEHVEALPPASDTVGGKRLFVDISVP 371 (519)
T ss_pred eCHHHHHHhhhcccccCCCeEEEEeCCC
Confidence 899999887432 378888886
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=97.63 E-value=4.8e-05 Score=81.85 Aligned_cols=89 Identities=13% Similarity=0.147 Sum_probs=54.0
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHHhCCcE---EEEEcCCCCCCCCCC--CCCccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYI---SIRMNFRGVGASSGT--YDSGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~---Vla~DlrGhG~S~g~--~~~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
+|||+||.. ++.. ..|..+++.|.++||. ++++++-....+... .......+.+++++++.+...-+. +|
T Consensus 3 PVVlVHG~~---~~~~-~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kV 77 (219)
T PF01674_consen 3 PVVLVHGTG---GNAY-SNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KV 77 (219)
T ss_dssp -EEEE--TT---TTTC-GGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---E
T ss_pred CEEEECCCC---cchh-hCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EE
Confidence 469999973 3222 2477899999999999 799999443332210 000112346778888888776566 99
Q ss_pred EEEEechhHHHHHHHHHhc
Q psy15208 110 ILAGFSFGTFVQAKLQKRL 128 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~ 128 (1027)
-||||||||.++..+....
T Consensus 78 DIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 78 DIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEEETCHHHHHHHHHHHC
T ss_pred EEEEcCCcCHHHHHHHHHc
Confidence 9999999999998887643
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.001 Score=77.84 Aligned_cols=123 Identities=11% Similarity=0.077 Sum_probs=74.4
Q ss_pred EEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCC---CCCCC
Q psy15208 8 FNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGAS---SGTYD 84 (1027)
Q Consensus 8 i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S---~g~~~ 84 (1027)
+.+..+-.++ +.|.|........+|.||++..+ .+..-. ..+++.+.|.+ |+.|+..|+..-+.. .+.+
T Consensus 79 vV~~~~~~~L--~~y~~~~~~~~~~~~pvLiV~Pl---~g~~~~-L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f- 150 (406)
T TIGR01849 79 VVWDKPFCRL--IHFKRQGFRAELPGPAVLIVAPM---SGHYAT-LLRSTVEALLP-DHDVYITDWVNARMVPLSAGKF- 150 (406)
T ss_pred EEEECCCeEE--EEECCCCcccccCCCcEEEEcCC---chHHHH-HHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCC-
Confidence 4444443333 44455431101123677888876 333222 34789999999 999999999776643 3443
Q ss_pred CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCc---CCccEEEEEccC
Q psy15208 85 SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKE---ISIKILILISVA 143 (1027)
Q Consensus 85 ~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~---~~V~gLVli~p~ 143 (1027)
.+++.++-+..+++.+ +. ++.|+|+||||..++.+++.+.+. .+++.+++++++
T Consensus 151 ~ldDYi~~l~~~i~~~----G~-~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~P 207 (406)
T TIGR01849 151 DLEDYIDYLIEFIRFL----GP-DIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGP 207 (406)
T ss_pred CHHHHHHHHHHHHHHh----CC-CCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecC
Confidence 3333343333333322 33 389999999999988777765331 158999988763
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >KOG0023|consensus | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00015 Score=80.51 Aligned_cols=101 Identities=19% Similarity=0.194 Sum_probs=77.2
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-cCcEE--cC------HHHHhccCCEEEecCC-
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-EGFLV--VT------MEYAKKYGDIFVTCTG- 874 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-~G~~v--~~------~~e~l~~aDvvi~atG- 874 (1027)
|+. +|+.|+|+|.|.+|....+.++++|++|+|.+....+.++|.. +|++. .. ++++...-|.++.++.
T Consensus 178 g~~-pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~ 256 (360)
T KOG0023|consen 178 GLG-PGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSN 256 (360)
T ss_pred CCC-CCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeee
Confidence 654 9999999999999999999999999999999998855555554 88872 22 2333444577776665
Q ss_pred -CcccCcHHHHhcCCCCeEEEEecCCCcccchhh
Q psy15208 875 -NYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEK 907 (1027)
Q Consensus 875 -~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~ 907 (1027)
..+.+.. .+..||.++.++.+|.....+.++.
T Consensus 257 ~a~~~~~~-~~~~lk~~Gt~V~vg~p~~~~~~~~ 289 (360)
T KOG0023|consen 257 LAEHALEP-LLGLLKVNGTLVLVGLPEKPLKLDT 289 (360)
T ss_pred ccccchHH-HHHHhhcCCEEEEEeCcCCcccccc
Confidence 4555554 4899999999999999865665553
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00025 Score=79.29 Aligned_cols=105 Identities=15% Similarity=0.160 Sum_probs=71.6
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCC-CEEEEEcCCchhHHHHhh-cC----cEE-cCHHHHhccC
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALS-AQVWIIEIDPICALQAAM-EG----FLV-VTMEYAKKYG 866 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~G-a~ViV~d~dp~r~~~A~~-~G----~~v-~~~~e~l~~a 866 (1027)
.++...+.+..+..+.+++|+|+|+|.+|+.++..++..| ++|+|+++++.++..... .+ +.+ .+..+.+.++
T Consensus 107 ~G~~~~l~~~~~~~~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~ 186 (278)
T PRK00258 107 IGFVRALEERLGVDLKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDLELQEELADF 186 (278)
T ss_pred HHHHHHHHhccCCCCCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecccchhccccC
Confidence 5677777653455689999999999999999999999999 599999999876644322 11 122 2334666789
Q ss_pred CEEEecCCCccc----CcHHHHhcCCCCeEEEEecC
Q psy15208 867 DIFVTCTGNYHV----ITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 867 Dvvi~atG~~~v----i~~~~~~~mk~gailvNvG~ 898 (1027)
|+||+||+..-- ...-..+.+++++.++.+-.
T Consensus 187 DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY 222 (278)
T PRK00258 187 DLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIY 222 (278)
T ss_pred CEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeec
Confidence 999999853210 01111345666777766644
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00071 Score=74.61 Aligned_cols=134 Identities=18% Similarity=0.275 Sum_probs=83.4
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHH-hCCc--EEEE--EcCCCC----CCCC---CCC------C-----CccchHH
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVML-SLGY--ISIR--MNFRGV----GASS---GTY------D-----SGNGETD 91 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La-~~Gy--~Vla--~DlrGh----G~S~---g~~------~-----~~~~~~~ 91 (1027)
+.||+||++ |+.. .+..++..+. +.|. .++. ++--|+ |.-. ..+ . +....+.
T Consensus 13 PTifihG~~---gt~~--s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 13 PTIFIHGYG---GTAN--SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp EEEEE--TT---GGCC--CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred cEEEECCCC---CChh--HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 459999984 3332 3667888886 5554 3433 333333 2211 110 1 1223456
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCc---CCccEEEEEccCCCcCC--------------------
Q psy15208 92 DMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKE---ISIKILILISVAVKKWL-------------------- 148 (1027)
Q Consensus 92 Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~---~~V~gLVli~p~~~~~~-------------------- 148 (1027)
-+..++.+|..+|....+-+|||||||..++.++..+... +.+..+|.++++.....
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~gp~~~~ 167 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNKNGPKSMT 167 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CSTT-BSS--
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcccCCcccC
Confidence 6678889999999999999999999999999999886442 35899999987644220
Q ss_pred --------C--CCC--CCcEEEEEeC------CCCCCChHHHH
Q psy15208 149 --------I--PEV--PKNTIIIHGE------LDEIIPLKDVF 173 (1027)
Q Consensus 149 --------l--~~i--~~PvLiIhG~------~D~iVP~~~~~ 173 (1027)
. ..+ ...+|-|.|. .|..||..++.
T Consensus 168 ~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~ 210 (255)
T PF06028_consen 168 PMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSL 210 (255)
T ss_dssp HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHC
T ss_pred HHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHH
Confidence 1 112 2568999999 89999999876
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >PRK04439 S-adenosylmethionine synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0096 Score=68.32 Aligned_cols=305 Identities=19% Similarity=0.257 Sum_probs=179.0
Q ss_pred eeccccCCCCccccchhhhhhHHHH----HHhh---------Cccc--------ccccccccccceeeeeeeeeeccc--
Q psy15208 185 VIPESVSEGHPDKIADQISDAILDE----IFLK---------DLKA--------RVAAETLCNNNLIVLSGEITTDAN-- 241 (1027)
Q Consensus 185 ~t~Esv~~GHPdkvaDqIsdaILD~----~L~~---------Dp~s--------rva~e~l~~~~~v~v~GEist~~~-- 241 (1027)
...|.-+.||||.+||.+++++-.+ ++++ |+-- +..--.+...=.+++.|.+|+...
T Consensus 20 EiVERKGiGHPDticD~iaE~~S~~Ls~~Yl~~fG~ILHHN~DK~llvgG~s~p~fGGG~vi~Pi~ii~~GRAt~~~~g~ 99 (399)
T PRK04439 20 EIVERKGIGHPDTICDGIAEAVSRALSRYYLEKFGAILHHNTDKVLLVGGRSAPKFGGGEVIEPIYIILGGRATKEVGGE 99 (399)
T ss_pred EEEeecCCCCChHHHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEccEEeccCCCceEEeeEEEEEecceeeeECCe
Confidence 3334455799999999888765433 3332 2221 111212233334578999887543
Q ss_pred -hhHHHHH----HHHhhh-cCCCCCCCCccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCC
Q psy15208 242 -IDYVNIV----RKTIKD-IGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPEL 315 (1027)
Q Consensus 242 -~d~~~~~----r~~l~~-iGy~~~~~g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~ 315 (1027)
+.+.+|+ |+.|++ +-+-+.+. ..-+...+.+-|+|......+... -.+|-|-.+..|||-
T Consensus 100 ~iPv~~Ia~~Aak~~L~~~l~~lD~e~-----hv~i~~~i~~GS~dL~~vF~r~~~---vp~ANDTS~gVGyAP------ 165 (399)
T PRK04439 100 EIPVGEIAIEAAKEYLRENLRNLDPER-----HVIIDVRLGPGSTDLVDVFERESI---VPLANDTSFGVGYAP------ 165 (399)
T ss_pred EecHHHHHHHHHHHHHHHhCccCCccc-----cEEEEEeeCCCcHHHHHHhCCCCC---ccccccccceeecCC------
Confidence 6666665 556665 33322221 134555678999999876654321 348999999999984
Q ss_pred CCcHHHHHHHHHHHHHHHHHc----CCCCCCCCCCceeEEEEecCCceeEEeEEEEe----eccCCCCC-hHHHHHHHHH
Q psy15208 316 MPSAIYYSHLIVKRQSELRKN----GNLPWLRPDAKSQVTLRYDNGKPVAIDTIVLS----TQHDPEIP-YRSIKEAAIE 386 (1027)
Q Consensus 316 mp~~~~~a~~l~~~~~~~r~~----~~~~~~~pd~k~qv~~~y~~~~~~~~~~~~~s----~qh~~~~~-~~~~~~~~~~ 386 (1027)
|+ --.+|+..++..-.+ ..+|+.+.|-|.- -+.+|+-+.+ .|. ..|-.+++ .-+.++.+.+
T Consensus 166 --lS--~~E~~Vl~~E~~lns~~~k~~~P~~GeDiKVM---G~R~g~~i~l---TVa~a~v~r~v~~~~~Y~~~k~~v~~ 235 (399)
T PRK04439 166 --LS--ETERLVLETERYLNSEEFKKRFPEVGEDIKVM---GLRNGDEITL---TIAMALVDRYVNDVDEYFEVKEEVKE 235 (399)
T ss_pred --CC--HHHHHHHHHHHHhcCcchhhcCCCcCCCeEEE---EEEcCCEEEE---EEEhHHhhhhcCCHHHHHHHHHHHHH
Confidence 22 123444444444322 3689999999974 2334432332 222 13333332 3345555555
Q ss_pred HhhhcccCCCCC-CCceEEECCCCCceecC----------CCCccccCCceeEEecC-CCcccCCCccccCCCC-Cccch
Q psy15208 387 EIIRPIIPKNLL-KNTRYLINPTGRFVIGG----------PKGDCGLTGRKIIVDTY-GGAAPHGGGAFSGKDP-SKIDR 453 (1027)
Q Consensus 387 ~vi~~~~~~~~~-~~~~~~inp~g~f~~gg----------p~~d~gltgrk~~vdty-gg~~~hggga~sgkd~-tkvdr 453 (1027)
++-.-+ . ++. .+..++||....--.|| =+||.|.+||=.=|--- -.+-|-+==|-+||.| +-|=.
T Consensus 236 ~v~~~a-~-~~~~~~v~v~iNt~D~~~~~~~YLTVtGTSAE~GDdG~VGRGNRvNGLITp~RPMSmEAaAGKNPv~HVGK 313 (399)
T PRK04439 236 KVEDLA-Q-KYTDRDVEVHINTADDPDEGGVYLTVTGTSAEMGDDGSVGRGNRVNGLITPNRPMSMEAAAGKNPVNHVGK 313 (399)
T ss_pred HHHHHH-H-hhCCCceEEEEeCCCCCCCCcEEEEeceeehhccCCcccCcCcccCcccCCCCCccccccCCCCCcccchH
Confidence 544432 2 222 35788899866532222 26899999995433210 0222334557899998 45666
Q ss_pred hhhhHHHHHHHHhhhh--hccceeeeEEEEeeccc--cceEEEEeecCCCCCCh----HHHHHHHHHhcCC
Q psy15208 454 SAAYVGRYIAKNIVAA--NLAKRCQIQISYAIGVA--KPTSIMVTSFGSGKISD----EKLTMLVKKHFDL 516 (1027)
Q Consensus 454 s~ay~ar~~ak~~v~~--g~a~~~~vq~~yaig~~--~p~s~~v~~~~t~~~~~----~~~~~~~~~~f~~ 516 (1027)
-=..+|.-||+.|++. | .++|.|.|---||.| +|..+.|...-....+- +++++++.+.++-
T Consensus 314 IYNvlA~~iA~~i~~~v~g-v~ev~V~llSqIG~PId~P~~a~v~v~~~~g~~~~~~~~~v~~I~~~~L~~ 383 (399)
T PRK04439 314 IYNVLANRIAREIYEEVEG-VKEVYVRLLSQIGKPIDEPLVASIQVIPEDGVLISDVEKEVEEIVDEELAN 383 (399)
T ss_pred HHHHHHHHHHHHHHHhcCC-ceEEEEEEeccCCCcCCCCeEEEEEEecCCCCChHHHHHHHHHHHHHHHhc
Confidence 6678899999999984 5 679999988889976 78877777653322332 2356666655543
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00022 Score=82.06 Aligned_cols=91 Identities=18% Similarity=0.114 Sum_probs=71.9
Q ss_pred ccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh-hcCcE-EcC------HHHHhc-----cCCEEEecC
Q psy15208 808 IAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAA-MEGFL-VVT------MEYAKK-----YGDIFVTCT 873 (1027)
Q Consensus 808 l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-~~G~~-v~~------~~e~l~-----~aDvvi~at 873 (1027)
..|++|+|.|. |.||..+++.++.+|++|++++.++.+...+. ..|++ +.+ ..+.+. ..|++++++
T Consensus 157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~v 236 (348)
T PLN03154 157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNV 236 (348)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECC
Confidence 57999999999 99999999999999999999988887776665 57874 222 222222 379999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
|.. .+ ...++.++++|.++.+|...
T Consensus 237 G~~-~~-~~~~~~l~~~G~iv~~G~~~ 261 (348)
T PLN03154 237 GGD-ML-DAALLNMKIHGRIAVCGMVS 261 (348)
T ss_pred CHH-HH-HHHHHHhccCCEEEEECccc
Confidence 975 33 45689999999999999753
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00023 Score=80.54 Aligned_cols=92 Identities=21% Similarity=0.241 Sum_probs=72.3
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCchhHHHHhhcCcE---EcCHHHHhccCCEEEecCCCccc--CcHH
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDPICALQAAMEGFL---VVTMEYAKKYGDIFVTCTGNYHV--ITHD 882 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~~A~~~G~~---v~~~~e~l~~aDvvi~atG~~~v--i~~~ 882 (1027)
-++|+|+|+|.+|..+|..++..|. +|+++|+++.+...+...|.. ..+.++++.++|+||.|++.... +-.+
T Consensus 6 ~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~~~~~v~~~ 85 (307)
T PRK07502 6 FDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVGASGAVAAE 85 (307)
T ss_pred CcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHHHHHHHHHH
Confidence 4689999999999999999999885 899999999877777777752 23567788899999999976431 1223
Q ss_pred HHhcCCCCeEEEEecCCCc
Q psy15208 883 HMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~d~ 901 (1027)
....++++++++++|....
T Consensus 86 l~~~l~~~~iv~dvgs~k~ 104 (307)
T PRK07502 86 IAPHLKPGAIVTDVGSVKA 104 (307)
T ss_pred HHhhCCCCCEEEeCccchH
Confidence 3456899999999988653
|
|
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00027 Score=87.90 Aligned_cols=97 Identities=13% Similarity=0.134 Sum_probs=74.5
Q ss_pred hcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhc-cCCEEEecCCCc---c
Q psy15208 803 ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKK-YGDIFVTCTGNY---H 877 (1027)
Q Consensus 803 ~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~-~aDvvi~atG~~---~ 877 (1027)
..+..+.+++|+|||+|.+|..+|+.++..|.+|+++|+++.. ..+...|+.. .+.++++. .+|+||.|+... .
T Consensus 362 ~~~~~~~~~kIgIIGlG~mG~slA~~L~~~G~~V~~~dr~~~~-~~a~~~Gv~~~~~~~el~~~~aDvVILavP~~~~~~ 440 (667)
T PLN02712 362 GCVNDGSKLKIAIVGFGNFGQFLAKTMVKQGHTVLAYSRSDYS-DEAQKLGVSYFSDADDLCEEHPEVILLCTSILSTEK 440 (667)
T ss_pred hccCCCCCCEEEEEecCHHHHHHHHHHHHCcCEEEEEECChHH-HHHHHcCCeEeCCHHHHHhcCCCEEEECCChHHHHH
Confidence 3455678899999999999999999999999999999988643 4466678763 35777665 589999998643 3
Q ss_pred cCcHHHHhcCCCCeEEEEecCCC
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d 900 (1027)
++..-....||+|++++++|...
T Consensus 441 vi~~l~~~~lk~g~ivvDv~SvK 463 (667)
T PLN02712 441 VLKSLPFQRLKRSTLFVDVLSVK 463 (667)
T ss_pred HHHHHHHhcCCCCcEEEECCCcc
Confidence 33332233689999999999875
|
|
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00023 Score=81.37 Aligned_cols=93 Identities=17% Similarity=0.259 Sum_probs=73.6
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHH----Hhc--cCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEY----AKK--YGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e----~l~--~aDvvi~atG 874 (1027)
..|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|++ +++ ..+ ... ..|++++++|
T Consensus 171 ~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l~~~~~~~~~d~vid~~g 250 (351)
T cd08233 171 KPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVRKLTGGGGVDVSFDCAG 250 (351)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHHHHHhCCCCCCEEEECCC
Confidence 579999999999999999999999999 899998888887777777775 222 111 121 3899999998
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
....+. ..++.|++++.++.+|....
T Consensus 251 ~~~~~~-~~~~~l~~~G~~v~~g~~~~ 276 (351)
T cd08233 251 VQATLD-TAIDALRPRGTAVNVAIWEK 276 (351)
T ss_pred CHHHHH-HHHHhccCCCEEEEEccCCC
Confidence 765444 55889999999999998643
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >PF01941 AdoMet_Synthase: S-adenosylmethionine synthetase (AdoMet synthetase); InterPro: IPR002795 A highly diverged class of S-adenosylmethionine synthetases have been identified in the archaea | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0098 Score=68.17 Aligned_cols=306 Identities=19% Similarity=0.254 Sum_probs=180.8
Q ss_pred ccccCCCCccccchhhhhhHHHH----HHhh---------Ccc--------cccccccccccceeeeeeeeeecc---ch
Q psy15208 187 PESVSEGHPDKIADQISDAILDE----IFLK---------DLK--------ARVAAETLCNNNLIVLSGEITTDA---NI 242 (1027)
Q Consensus 187 ~Esv~~GHPdkvaDqIsdaILD~----~L~~---------Dp~--------srva~e~l~~~~~v~v~GEist~~---~~ 242 (1027)
.|.-+.||||.+||.+++++-.+ +++. |+- ++..--.+...=.|+++|.+|+.. .+
T Consensus 22 VERKGiGHPDtIcD~iaE~vS~~Ls~~Yl~~fG~ILHHN~DK~llvgG~s~p~fGGG~vi~Pi~ii~~GRAt~~~~~~~i 101 (396)
T PF01941_consen 22 VERKGIGHPDTICDGIAEAVSRALSRYYLERFGAILHHNTDKVLLVGGRSEPKFGGGEVIEPIYIILGGRATKEVGGEKI 101 (396)
T ss_pred EEecCCCCChHHHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEccEEeccCCCceeeeeEEEEEecceeeccCCeec
Confidence 34445799999999988766433 3332 221 122222333444577899988864 56
Q ss_pred hHHHHH----HHHhhh-cCCCCCCCCccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCCCC
Q psy15208 243 DYVNIV----RKTIKD-IGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPELMP 317 (1027)
Q Consensus 243 d~~~~~----r~~l~~-iGy~~~~~g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~mp 317 (1027)
.+.+|+ |+.|++ +-+-+.+ +..-+...+.+-|+|+.....+... -.+|-|-.+..|||-=.
T Consensus 102 Pv~~Ia~~aak~~l~~~l~~lD~e-----~hv~i~~~i~~GS~dL~dvf~r~~~---vp~ANDTS~gVGyAPlS------ 167 (396)
T PF01941_consen 102 PVDEIAIEAAKEWLRENLRFLDPE-----RHVIIDCRIGPGSPDLVDVFERGKK---VPLANDTSFGVGYAPLS------ 167 (396)
T ss_pred cHHHHHHHHHHHHHHHhcccCCcc-----ccEEEEEeeCCCChHHHHHhccccc---ccccCCccceeccCCcc------
Confidence 666664 555555 2222211 1234555688999999887766432 35899999999998322
Q ss_pred cHHHHHHHHHHHHHHHHHc----CCCCCCCCCCceeEEEEecCCceeEE--eEEEEeeccCCCCC-hHHHHHHHHHHhhh
Q psy15208 318 SAIYYSHLIVKRQSELRKN----GNLPWLRPDAKSQVTLRYDNGKPVAI--DTIVLSTQHDPEIP-YRSIKEAAIEEIIR 390 (1027)
Q Consensus 318 ~~~~~a~~l~~~~~~~r~~----~~~~~~~pd~k~qv~~~y~~~~~~~~--~~~~~s~qh~~~~~-~~~~~~~~~~~vi~ 390 (1027)
-..+|+..++..-.+ ..+|+.+.|-|.-- + .+|+-+.+ ..-.|| .|-.+.+ .-+.++.+++.+-.
T Consensus 168 ----~~E~~Vl~~Er~lns~~fk~~~p~~GeDiKVMG-~--R~g~~i~LTvA~a~v~-r~v~~~~~Y~~~k~~v~~~v~~ 239 (396)
T PF01941_consen 168 ----ETEKLVLETERYLNSPEFKKKFPEVGEDIKVMG-L--REGDKITLTVAMAFVD-RYVSSLDEYFERKEEVKEEVED 239 (396)
T ss_pred ----HHHHHHHHHHHHhccccccccCCCcCCCeEEEE-E--EeCCEEEEEEEhhhhh-hhcCCHHHHHHHHHHHHHHHHH
Confidence 223344444433322 35899999999743 3 34432332 111111 2222222 22445555444433
Q ss_pred cccCCCCCCCceEEECCCCCceecCC----------CCccccCCceeEEecC-CCcccCCCccccCCCC-CccchhhhhH
Q psy15208 391 PIIPKNLLKNTRYLINPTGRFVIGGP----------KGDCGLTGRKIIVDTY-GGAAPHGGGAFSGKDP-SKIDRSAAYV 458 (1027)
Q Consensus 391 ~~~~~~~~~~~~~~inp~g~f~~ggp----------~~d~gltgrk~~vdty-gg~~~hggga~sgkd~-tkvdrs~ay~ 458 (1027)
.+.+....+.+++||..-.--.||+ +||.|.+||=.=|--- -.+-|-+==|-+||.| +-|=.-=..+
T Consensus 240 -~a~~~~~~~v~v~iNt~D~~~~~~~YLTvtGTSAE~GDdG~VGRGNRvNGLITp~RPMSmEAaAGKNPv~HVGKIYNvl 318 (396)
T PF01941_consen 240 -YAAKYTDRDVEVHINTADDPEEGGVYLTVTGTSAEMGDDGSVGRGNRVNGLITPNRPMSMEAAAGKNPVNHVGKIYNVL 318 (396)
T ss_pred -HHHHhcCCceEEEEECCCCCCCCcEEEEeceeeccccCCcccCcccccccccCCCCCCcccccCCCCCcchhhHHHHHH
Confidence 2322223456888988764333333 6999999995533210 0223445668899999 4566667888
Q ss_pred HHHHHHHhhhh-hccceeeeEEEEeeccc--cceEEEEeecCCCCCCh----HHHHHHHHHhcC
Q psy15208 459 GRYIAKNIVAA-NLAKRCQIQISYAIGVA--KPTSIMVTSFGSGKISD----EKLTMLVKKHFD 515 (1027)
Q Consensus 459 ar~~ak~~v~~-g~a~~~~vq~~yaig~~--~p~s~~v~~~~t~~~~~----~~~~~~~~~~f~ 515 (1027)
|.-||+.|++. .=.++|.|.|---||.| +|..+.|..-....+.- ++++++|.+.++
T Consensus 319 A~~iA~~I~~~v~gv~ev~V~llSqIG~PId~P~~~~v~i~~~~~~~~~~~~~~v~~Ii~~~L~ 382 (396)
T PF01941_consen 319 ANEIAQRIYEEVDGVEEVYVRLLSQIGKPIDEPQIASVQIIPEDGVLLEDVEKEVEEIIDEELA 382 (396)
T ss_pred HHHHHHHHHHhcCCcceEEEEEccccCCCCCCCeEEEEEEecCCCCchHHHHHHHHHHHHHHHh
Confidence 99999999984 22568889888889954 89888887766554332 346666655443
|
S-adenosylmethionine is the primary alkylating agent in all known organisms. ATP:L-methionine S-adenosyltransferase (MAT) catalyses the only known biosynthetic route to this central metabolite. Although the amino acid sequence of MAT is strongly conserved among bacteria and eukarya (see IPR002133 from INTERPRO) no homologues had been recognised in the completed genome sequences of any archaea. The identification of a second major class of MAT emphasises the long evolutionary history of the archaeal lineage and the structural diversity found even in crucial metabolic enzymes []. Three bacterial genomes encode both the archaeal and eukaryotic/bacterial types of MAT [].; GO: 0004478 methionine adenosyltransferase activity, 0005524 ATP binding, 0006730 one-carbon metabolic process |
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00031 Score=79.20 Aligned_cols=91 Identities=14% Similarity=0.218 Sum_probs=73.8
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCCCcccCcH------HH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTGNYHVITH------DH 883 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG~~~vi~~------~~ 883 (1027)
++|+|+|.|.+|..+|..+...|.+|+++|+++.+..+....|.. ..+..+++.++|+||.|+.+...+.. ..
T Consensus 2 ~~Ig~IGlG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~~~~~~vl~~~~~i 81 (296)
T PRK15461 2 AAIAFIGLGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGDLVRSVLFGENGV 81 (296)
T ss_pred CeEEEEeeCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcccH
Confidence 379999999999999999999999999999999887777777775 45678888999999999876532221 22
Q ss_pred HhcCCCCeEEEEecCCCc
Q psy15208 884 MRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d~ 901 (1027)
+..+++|.+++|++..+.
T Consensus 82 ~~~l~~g~lvid~sT~~p 99 (296)
T PRK15461 82 CEGLSRDALVIDMSTIHP 99 (296)
T ss_pred hhcCCCCCEEEECCCCCH
Confidence 456889999999998753
|
|
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00011 Score=71.64 Aligned_cols=86 Identities=16% Similarity=0.213 Sum_probs=68.8
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHH----hc--cCCEEEecCCCcccCcHHHHhcC
Q psy15208 820 DVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYA----KK--YGDIFVTCTGNYHVITHDHMRDM 887 (1027)
Q Consensus 820 ~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~----l~--~aDvvi~atG~~~vi~~~~~~~m 887 (1027)
+||..+++.|+.+|++|++++.++.+...+...|++ +.+ ..+. .. ..|+||+|+|+...+. ..++.+
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~-~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQ-EAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHH-HHHHHE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHH-HHHHHh
Confidence 589999999999999999999999999999999975 322 2222 22 3899999999887555 559999
Q ss_pred CCCeEEEEecCCC-cccchh
Q psy15208 888 KDQAIVCNIGHFD-NEIEVE 906 (1027)
Q Consensus 888 k~gailvNvG~~d-~eid~~ 906 (1027)
+++|.++.+|... ..+.++
T Consensus 80 ~~~G~~v~vg~~~~~~~~~~ 99 (130)
T PF00107_consen 80 RPGGRIVVVGVYGGDPISFN 99 (130)
T ss_dssp EEEEEEEEESSTSTSEEEEE
T ss_pred ccCCEEEEEEccCCCCCCCC
Confidence 9999999999986 444433
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=97.53 E-value=9.1e-05 Score=70.33 Aligned_cols=90 Identities=17% Similarity=0.194 Sum_probs=64.5
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE--cCHHHHhccCCEEEecCCCcccCcHHHH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV--VTMEYAKKYGDIFVTCTGNYHVITHDHM 884 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v--~~~~e~l~~aDvvi~atG~~~vi~~~~~ 884 (1027)
.+.|++|+|+|.|.+|..-++.+...||+|+|+..+. ......++. -..++.+..+|+|+.||+++. ++.+..
T Consensus 4 ~l~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~----~~~~~~i~~~~~~~~~~l~~~~lV~~at~d~~-~n~~i~ 78 (103)
T PF13241_consen 4 DLKGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI----EFSEGLIQLIRREFEEDLDGADLVFAATDDPE-LNEAIY 78 (103)
T ss_dssp --TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE----HHHHTSCEEEESS-GGGCTTESEEEE-SS-HH-HHHHHH
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch----hhhhhHHHHHhhhHHHHHhhheEEEecCCCHH-HHHHHH
Confidence 5789999999999999999999999999999997764 111123332 234566788999999998876 676766
Q ss_pred hcCCCCeEEEEecCCCc
Q psy15208 885 RDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d~ 901 (1027)
+..+.-++++|+.-.+.
T Consensus 79 ~~a~~~~i~vn~~D~p~ 95 (103)
T PF13241_consen 79 ADARARGILVNVVDDPE 95 (103)
T ss_dssp HHHHHTTSEEEETT-CC
T ss_pred HHHhhCCEEEEECCCcC
Confidence 77787889999866543
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00017 Score=82.47 Aligned_cols=114 Identities=20% Similarity=0.207 Sum_probs=67.8
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHh---CCcEEEEEcCCCCCCCCCCCCC----ccchHHHHHHHHHHHHHh
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS---LGYISIRMNFRGVGASSGTYDS----GNGETDDMEILLRYIQKK 103 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~---~Gy~Vla~DlrGhG~S~g~~~~----~~~~~~Dv~avl~~L~~~ 103 (1027)
..+|++|++|||.... ....+...+.+.|.. ..+.|+++|+..- +...|.. .......+..++.+|...
T Consensus 69 ~~~pt~iiiHGw~~~~--~~~~~~~~~~~all~~~~~d~NVI~VDWs~~--a~~~Y~~a~~n~~~vg~~la~~l~~L~~~ 144 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSG--SSESWIQDMIKALLQKDTGDYNVIVVDWSRG--ASNNYPQAVANTRLVGRQLAKFLSFLINN 144 (331)
T ss_dssp TTSEEEEEE--TT-TT---TTTHHHHHHHHHHCC--S-EEEEEEE-HHH--HSS-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcc--cchhHHHHHHHHHHhhccCCceEEEEcchhh--ccccccchhhhHHHHHHHHHHHHHHHHhh
Confidence 3689999999985432 122345566665544 4899999999521 1112211 122344455666666632
Q ss_pred --CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC
Q psy15208 104 --YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL 148 (1027)
Q Consensus 104 --~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~ 148 (1027)
.+...++|+|||+||.+|-.++.......++..+..++|+.+.|.
T Consensus 145 ~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~ 191 (331)
T PF00151_consen 145 FGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFE 191 (331)
T ss_dssp H---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTT
T ss_pred cCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccccc
Confidence 344579999999999999999988765346899999999987663
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1 | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00047 Score=74.78 Aligned_cols=96 Identities=23% Similarity=0.258 Sum_probs=68.9
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEE-EEcC----------CchhHHHHhh-cC-------cEEcCHHHHh-c
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVW-IIEI----------DPICALQAAM-EG-------FLVVTMEYAK-K 864 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~Vi-V~d~----------dp~r~~~A~~-~G-------~~v~~~~e~l-~ 864 (1027)
+..+.|++|+|.|+|.||+.+|+.+..+|++|+ |.|. |+........ .| .+.++.++.+ .
T Consensus 26 ~~~l~~~~v~I~G~G~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~~g~l~~~~~~~~~~~~~i~~~ 105 (227)
T cd01076 26 GIGLAGARVAIQGFGNVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVLGFPGAERITNEELLEL 105 (227)
T ss_pred CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCCcccCCCceecCCccceee
Confidence 456899999999999999999999999999988 7887 6544443322 22 2233444444 3
Q ss_pred cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccc
Q psy15208 865 YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIE 904 (1027)
Q Consensus 865 ~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid 904 (1027)
++||++.|+ ..++++.+....++ +.+| ++..+..+.
T Consensus 106 ~~Dvlip~a-~~~~i~~~~~~~l~--a~~I-~egAN~~~t 141 (227)
T cd01076 106 DCDILIPAA-LENQITADNADRIK--AKII-VEAANGPTT 141 (227)
T ss_pred cccEEEecC-ccCccCHHHHhhce--eeEE-EeCCCCCCC
Confidence 689999998 55679999999998 3333 355566665
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00022 Score=76.14 Aligned_cols=93 Identities=15% Similarity=0.189 Sum_probs=69.6
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH--HhhcCcEEcC---HHHHhccCCEEEecCCCcccCc
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ--AAMEGFLVVT---MEYAKKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~--A~~~G~~v~~---~~e~l~~aDvvi~atG~~~vi~ 880 (1027)
+.+.|++|+|+|.|.+|..-++.|...||+|+|++.++....+ +....+.+.. ..+.+..+|+||.|||.+. ++
T Consensus 5 l~l~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at~d~~-ln 83 (205)
T TIGR01470 5 ANLEGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDADILEGAFLVIAATDDEE-LN 83 (205)
T ss_pred EEcCCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECCCCHH-HH
Confidence 3578999999999999999999999999999999776543332 2222333321 2455778999999999875 57
Q ss_pred HHHHhcCCCCeEEEEecCC
Q psy15208 881 HDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~ 899 (1027)
.......+..++++|+.--
T Consensus 84 ~~i~~~a~~~~ilvn~~d~ 102 (205)
T TIGR01470 84 RRVAHAARARGVPVNVVDD 102 (205)
T ss_pred HHHHHHHHHcCCEEEECCC
Confidence 6666667778899997543
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00022 Score=79.71 Aligned_cols=91 Identities=18% Similarity=0.203 Sum_probs=70.6
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE--EcCHHHHhccCCEEEecCCCcccCc--HHHHhcC
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL--VVTMEYAKKYGDIFVTCTGNYHVIT--HDHMRDM 887 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~--v~~~~e~l~~aDvvi~atG~~~vi~--~~~~~~m 887 (1027)
+|+|+|+|.+|..+|..++..|.+|+++|+++.....+...|.. ..+..+++.++|+||.|+....+.. ++....+
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~~~~~~~~~l~~~l 81 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIGLLLPPSEQLIPAL 81 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHHHHHHHHHHHHHhC
Confidence 69999999999999999999999999999998877777777752 2223356789999999987543221 2334567
Q ss_pred CCCeEEEEecCCCcc
Q psy15208 888 KDQAIVCNIGHFDNE 902 (1027)
Q Consensus 888 k~gailvNvG~~d~e 902 (1027)
++++++.++|....+
T Consensus 82 ~~~~ii~d~~Svk~~ 96 (279)
T PRK07417 82 PPEAIVTDVGSVKAP 96 (279)
T ss_pred CCCcEEEeCcchHHH
Confidence 899999999987543
|
|
| >KOG3847|consensus | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00044 Score=76.24 Aligned_cols=122 Identities=14% Similarity=0.226 Sum_probs=80.8
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC-----C---------C-------CCcc--
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG-----T---------Y-------DSGN-- 87 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g-----~---------~-------~~~~-- 87 (1027)
...|+|||.||. +|+.. .|..+.-.||++||-|.+++.|.+..+.- . + ....
T Consensus 116 ~k~PvvvFSHGL---ggsRt--~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef 190 (399)
T KOG3847|consen 116 DKYPVVVFSHGL---GGSRT--LYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEF 190 (399)
T ss_pred CCccEEEEeccc---ccchh--hHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeE
Confidence 568999999997 34432 57788999999999999999987755431 0 0 0000
Q ss_pred --------chHHHHHHHHHHHHHh-----------------------CCCCcEEEEEechhHHHHHHHHHhcCCcCCccE
Q psy15208 88 --------GETDDMEILLRYIQKK-----------------------YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKI 136 (1027)
Q Consensus 88 --------~~~~Dv~avl~~L~~~-----------------------~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~g 136 (1027)
..+.....+++.+.+- ....++.++|||+||+.++...+.+.+ ++.
T Consensus 191 ~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~---Frc 267 (399)
T KOG3847|consen 191 HIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD---FRC 267 (399)
T ss_pred EeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc---eee
Confidence 0123333333333321 111358999999999999888877554 777
Q ss_pred EEEEccC---CCcCCCCCCCCcEEEEE
Q psy15208 137 LILISVA---VKKWLIPEVPKNTIIIH 160 (1027)
Q Consensus 137 LVli~p~---~~~~~l~~i~~PvLiIh 160 (1027)
.|+++.. .........+-|+++|.
T Consensus 268 aI~lD~WM~Pl~~~~~~~arqP~~fin 294 (399)
T KOG3847|consen 268 AIALDAWMFPLDQLQYSQARQPTLFIN 294 (399)
T ss_pred eeeeeeeecccchhhhhhccCCeEEEE
Confidence 7777753 22334677889999987
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0043 Score=70.53 Aligned_cols=149 Identities=15% Similarity=0.110 Sum_probs=98.9
Q ss_pred EEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCC--CCCCCC----
Q psy15208 8 FNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRG--VGASSG---- 81 (1027)
Q Consensus 8 i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrG--hG~S~g---- 81 (1027)
..+...+.++ -.+|.|... ..+++.||++||++.+..+. .....+.+.|.++|+.++++.+|. ...++.
T Consensus 65 ~~L~~~~~~f-laL~~~~~~--~~~~G~vIilp~~g~~~d~p--~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~ 139 (310)
T PF12048_consen 65 QWLQAGEERF-LALWRPANS--AKPQGAVIILPDWGEHPDWP--GLIAPLRRELPDHGWATLSITLPDPAPPASPNRATE 139 (310)
T ss_pred EEeecCCEEE-EEEEecccC--CCCceEEEEecCCCCCCCcH--hHHHHHHHHhhhcCceEEEecCCCcccccCCccCCC
Confidence 3455433344 346666642 35788999999986544322 245678889999999999999987 111110
Q ss_pred ----------CC--CC-----------------ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcC
Q psy15208 82 ----------TY--DS-----------------GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEI 132 (1027)
Q Consensus 82 ----------~~--~~-----------------~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~ 132 (1027)
.. .. ...+..-+.++++++... +..+++|+||+.|+..++.+....+..
T Consensus 140 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~-~~~~ivlIg~G~gA~~~~~~la~~~~~- 217 (310)
T PF12048_consen 140 AEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ-GGKNIVLIGHGTGAGWAARYLAEKPPP- 217 (310)
T ss_pred CCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHhcCCCc-
Confidence 00 00 011233344555555444 555699999999999999999988753
Q ss_pred CccEEEEEccCCCcC--------CCCCCCCcEEEEEeCC
Q psy15208 133 SIKILILISVAVKKW--------LIPEVPKNTIIIHGEL 163 (1027)
Q Consensus 133 ~V~gLVli~p~~~~~--------~l~~i~~PvLiIhG~~ 163 (1027)
.++++|++++..+.. .+..+..|+|=|+...
T Consensus 218 ~~daLV~I~a~~p~~~~n~~l~~~la~l~iPvLDi~~~~ 256 (310)
T PF12048_consen 218 MPDALVLINAYWPQPDRNPALAEQLAQLKIPVLDIYSAD 256 (310)
T ss_pred ccCeEEEEeCCCCcchhhhhHHHHhhccCCCEEEEecCC
Confidence 489999999876643 2567889999888776
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00036 Score=77.73 Aligned_cols=91 Identities=21% Similarity=0.203 Sum_probs=74.7
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchh-HHHHhhcCcEE-cCHHHHhccCCEEEecCCCcc----cCc--HH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPIC-ALQAAMEGFLV-VTMEYAKKYGDIFVTCTGNYH----VIT--HD 882 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r-~~~A~~~G~~v-~~~~e~l~~aDvvi~atG~~~----vi~--~~ 882 (1027)
.+|.+||.|..|..+|++|...|-.|.|+|++|.+ ...+...|..+ .+..++++.+|+||++.++.. ++. ..
T Consensus 1 ~kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~g 80 (286)
T COG2084 1 MKIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGENG 80 (286)
T ss_pred CeEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCccc
Confidence 37999999999999999999999999999999988 44465668874 467799999999999887653 332 23
Q ss_pred HHhcCCCCeEEEEecCCCc
Q psy15208 883 HMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~d~ 901 (1027)
.++.||+|+++|+.+.-+.
T Consensus 81 ~~~~~~~G~i~IDmSTisp 99 (286)
T COG2084 81 LLEGLKPGAIVIDMSTISP 99 (286)
T ss_pred hhhcCCCCCEEEECCCCCH
Confidence 4678999999999988643
|
|
| >PRK10083 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00031 Score=79.68 Aligned_cols=92 Identities=15% Similarity=0.168 Sum_probs=72.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHh-CCCE-EEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc----cCCEEEecCCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRA-LSAQ-VWIIEIDPICALQAAMEGFL-VVT-----MEYAKK----YGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~-~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~----~aDvvi~atG~ 875 (1027)
..|++|+|.|.|.+|+.+++.++. +|++ |++++.++.+...+...|++ +++ ..+.+. ..|++++++|.
T Consensus 159 ~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~vid~~g~ 238 (339)
T PRK10083 159 TEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPTLIIDAACH 238 (339)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCCEEEECCCC
Confidence 579999999999999999999997 6995 77888888888888888875 332 223332 34799999986
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
...+. +.++.++++|.++++|..+
T Consensus 239 ~~~~~-~~~~~l~~~G~~v~~g~~~ 262 (339)
T PRK10083 239 PSILE-EAVTLASPAARIVLMGFSS 262 (339)
T ss_pred HHHHH-HHHHHhhcCCEEEEEccCC
Confidence 65444 5589999999999999764
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0019 Score=72.72 Aligned_cols=85 Identities=18% Similarity=0.219 Sum_probs=53.7
Q ss_pred HHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC------CCCcEEEEEechhHHHHHHHHHh--
Q psy15208 56 TLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKY------PYLPIILAGFSFGTFVQAKLQKR-- 127 (1027)
Q Consensus 56 ~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~------~~~pviLVGhSmGG~vAl~~A~~-- 127 (1027)
.+...+.++||.|+++|+.|.|. .|.........+...++..++.. ...++.++|||.||.-++..+..
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~---~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~ 93 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGT---PYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAP 93 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCC---cccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhH
Confidence 35556667899999999999987 33222233333333333333211 23579999999999998776643
Q ss_pred -cCCcCC--ccEEEEEccC
Q psy15208 128 -LDKEIS--IKILILISVA 143 (1027)
Q Consensus 128 -~p~~~~--V~gLVli~p~ 143 (1027)
|..+.. +.|.++.+++
T Consensus 94 ~YApeL~~~l~Gaa~gg~~ 112 (290)
T PF03583_consen 94 SYAPELNRDLVGAAAGGPP 112 (290)
T ss_pred HhCcccccceeEEeccCCc
Confidence 222334 7788877764
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00065 Score=76.95 Aligned_cols=99 Identities=20% Similarity=0.237 Sum_probs=76.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHHHh-h---cCcE--EcCHHHHhccCCEEEecCCCc-cc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQAA-M---EGFL--VVTMEYAKKYGDIFVTCTGNY-HV 878 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~A~-~---~G~~--v~~~~e~l~~aDvvi~atG~~-~v 878 (1027)
...++++|+|+|..|+..++.+.. ++. +|.++++++.++.+.. . .++. +.+.++++.++|+|++||+++ .+
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~av~~aDiVitaT~s~~Pl 202 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEAIPEAVDLVVTATTSRTPV 202 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHHHhhcCCEEEEccCCCCce
Confidence 467999999999999999999865 676 7999999987765422 1 2344 347888999999999998765 45
Q ss_pred CcHHHHhcCCCCeEEEEecCC---Ccccchhhhhc
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHF---DNEIEVEKLKK 910 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~---d~eid~~~l~~ 910 (1027)
+.. .+|+|+.+.++|.+ ..|+|.+.+..
T Consensus 203 ~~~----~~~~g~hi~~iGs~~p~~~El~~~~~~~ 233 (304)
T PRK07340 203 YPE----AARAGRLVVAVGAFTPDMAELAPRTVRG 233 (304)
T ss_pred eCc----cCCCCCEEEecCCCCCCcccCCHHHHhh
Confidence 553 37999999999986 36888775553
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00065 Score=77.69 Aligned_cols=92 Identities=16% Similarity=0.205 Sum_probs=72.4
Q ss_pred CccccCCEEEEEcC-ChhHHHHHHHHHh-CCC-EEEEEcCCchhHHH-HhhcC-cEEcCHHHHhccCCEEEecCCCc-c-
Q psy15208 805 DVMIAGKIAVIIGY-GDVGKGSAQAMRA-LSA-QVWIIEIDPICALQ-AAMEG-FLVVTMEYAKKYGDIFVTCTGNY-H- 877 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~-G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~-A~~~G-~~v~~~~e~l~~aDvvi~atG~~-~- 877 (1027)
+..+.||+|+|+|+ |.||+.+++.+.. .|+ +++++++++.++.. +...+ .++.++++++.++|+|+.+|+.. .
T Consensus 150 g~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv~~ts~~~~~ 229 (340)
T PRK14982 150 GIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIVVWVASMPKGV 229 (340)
T ss_pred ccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEEEECCcCCcCC
Confidence 44689999999999 8999999999975 575 89999988766654 22222 34567888999999999999864 3
Q ss_pred cCcHHHHhcCCCCeEEEEecCC
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+++.++ |+++.++++++..
T Consensus 230 ~I~~~~---l~~~~~viDiAvP 248 (340)
T PRK14982 230 EIDPET---LKKPCLMIDGGYP 248 (340)
T ss_pred cCCHHH---hCCCeEEEEecCC
Confidence 367664 5899999999987
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00033 Score=78.58 Aligned_cols=90 Identities=14% Similarity=0.202 Sum_probs=66.7
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-------cC-----------------cE-EcCHHHHhcc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-------EG-----------------FL-VVTMEYAKKY 865 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-------~G-----------------~~-v~~~~e~l~~ 865 (1027)
++|+|+|.|.+|.++|..++..|.+|+++|+++.+...+.. .+ .. ..++++++.+
T Consensus 2 ~~V~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (288)
T PRK09260 2 EKLVVVGAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVAD 81 (288)
T ss_pred cEEEEECccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhcC
Confidence 57999999999999999999999999999999876554321 11 22 3457788899
Q ss_pred CCEEEecCCCcccCcHH----HHhcCCCCeEE-EEecCCC
Q psy15208 866 GDIFVTCTGNYHVITHD----HMRDMKDQAIV-CNIGHFD 900 (1027)
Q Consensus 866 aDvvi~atG~~~vi~~~----~~~~mk~gail-vNvG~~d 900 (1027)
+|+||+|.....-+... ..+.+++++++ +|++..+
T Consensus 82 aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt~~ 121 (288)
T PRK09260 82 ADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTSTMS 121 (288)
T ss_pred CCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Confidence 99999998765322222 23557888877 6777753
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00092 Score=78.71 Aligned_cols=91 Identities=18% Similarity=0.157 Sum_probs=69.2
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHH-HhhcC-cEEcC---HHHHhccCCEEEecCCCcc-cC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQ-AAMEG-FLVVT---MEYAKKYGDIFVTCTGNYH-VI 879 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~-A~~~G-~~v~~---~~e~l~~aDvvi~atG~~~-vi 879 (1027)
.+.|++|+|+|+|.+|+.+|..++..|+ +++++.+++.++.. +...+ ..+.+ +.+.+.++|+||+||+.++ ++
T Consensus 178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l~~aDiVI~aT~a~~~vi 257 (414)
T PRK13940 178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIKKADIIIAAVNVLEYIV 257 (414)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHhccCCEEEECcCCCCeeE
Confidence 4789999999999999999999999997 79999999877654 33333 34444 3456789999999998764 66
Q ss_pred cHHHHhcCCCCeEEEEecCC
Q psy15208 880 THDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~ 899 (1027)
+.+.+. ...-++++.+.+
T Consensus 258 ~~~~~~--~~~~~~iDLavP 275 (414)
T PRK13940 258 TCKYVG--DKPRVFIDISIP 275 (414)
T ss_pred CHHHhC--CCCeEEEEeCCC
Confidence 766542 233577888776
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00056 Score=91.57 Aligned_cols=101 Identities=18% Similarity=0.155 Sum_probs=73.3
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILA 112 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLV 112 (1027)
.+.++++||++ |+. ..|..+++.|.. ++.|+.+|+||++.+.....+...+++++.+.++. ..+..|++++
T Consensus 1068 ~~~l~~lh~~~---g~~--~~~~~l~~~l~~-~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~---~~~~~p~~l~ 1138 (1296)
T PRK10252 1068 GPTLFCFHPAS---GFA--WQFSVLSRYLDP-QWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLE---QQPHGPYHLL 1138 (1296)
T ss_pred CCCeEEecCCC---Cch--HHHHHHHHhcCC-CCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHh---hCCCCCEEEE
Confidence 35689999973 332 368889998865 79999999999987654333445555555444443 3344589999
Q ss_pred EechhHHHHHHHHHhc---CCcCCccEEEEEccCC
Q psy15208 113 GFSFGTFVQAKLQKRL---DKEISIKILILISVAV 144 (1027)
Q Consensus 113 GhSmGG~vAl~~A~~~---p~~~~V~gLVli~p~~ 144 (1027)
||||||.+|+.+|.+. ++ ++..++++++..
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~--~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGE--EVAFLGLLDTWP 1171 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCC--ceeEEEEecCCC
Confidence 9999999999999864 44 688888888643
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00067 Score=81.74 Aligned_cols=128 Identities=20% Similarity=0.108 Sum_probs=79.3
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCC----CCCCCCCCCCC-ccchH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFR----GVGASSGTYDS-GNGET 90 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~Dlr----GhG~S~g~~~~-~~~~~ 90 (1027)
-++.-+|.|.........|++|++||++...|+.....+ .-...++.+++-|+.++|| |+=.+...... ...-+
T Consensus 108 CL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~-~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl 186 (535)
T PF00135_consen 108 CLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPY-DGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGL 186 (535)
T ss_dssp --EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGG-HTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHH
T ss_pred HHHHhhhhccccccccccceEEEeecccccCCCcccccc-cccccccCCCEEEEEecccccccccccccccccCchhhhh
Confidence 467778889874322257999999998776666521122 2334456779999999997 22212111111 23357
Q ss_pred HHHHHHHHHHHHh---CCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 91 DDMEILLRYIQKK---YPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 91 ~Dv~avl~~L~~~---~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
.|...+++|+++. ++.+ +|.|+|||.||..+...+.....+..++++|+.++..
T Consensus 187 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 187 LDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 8999999999974 4544 4999999999999877776633244789999998743
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PLN02256 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00069 Score=76.68 Aligned_cols=91 Identities=15% Similarity=0.153 Sum_probs=69.3
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHh-ccCCEEEecCCCcc---cCcHHH
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAK-KYGDIFVTCTGNYH---VITHDH 883 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l-~~aDvvi~atG~~~---vi~~~~ 883 (1027)
.+++|+|+|+|.+|..+|+.++..|.+|++++.++. ...+...|+.. .+.++++ ..+|+||.|+.... ++..-.
T Consensus 35 ~~~kI~IIG~G~mG~slA~~L~~~G~~V~~~d~~~~-~~~a~~~gv~~~~~~~e~~~~~aDvVilavp~~~~~~vl~~l~ 113 (304)
T PLN02256 35 RKLKIGIVGFGNFGQFLAKTFVKQGHTVLATSRSDY-SDIAAELGVSFFRDPDDFCEEHPDVVLLCTSILSTEAVLRSLP 113 (304)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECccH-HHHHHHcCCeeeCCHHHHhhCCCCEEEEecCHHHHHHHHHhhh
Confidence 678999999999999999999999999999998874 34456677754 3566665 46999999987542 222211
Q ss_pred HhcCCCCeEEEEecCCC
Q psy15208 884 MRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d 900 (1027)
...+++++++++++...
T Consensus 114 ~~~l~~~~iviDv~SvK 130 (304)
T PLN02256 114 LQRLKRSTLFVDVLSVK 130 (304)
T ss_pred hhccCCCCEEEecCCch
Confidence 34478999999999964
|
|
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0011 Score=75.87 Aligned_cols=98 Identities=22% Similarity=0.210 Sum_probs=74.2
Q ss_pred cCCEEEEEcCChhHHHHHHHHH-hCCC-EEEEEcCCchhHHHHh-----hcCcE---EcCHHHHhccCCEEEecCCCccc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMR-ALSA-QVWIIEIDPICALQAA-----MEGFL---VVTMEYAKKYGDIFVTCTGNYHV 878 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~-~~Ga-~ViV~d~dp~r~~~A~-----~~G~~---v~~~~e~l~~aDvvi~atG~~~v 878 (1027)
..++++|+|+|.+|+..+..+. ..++ +|.++++++.++.... ..+.+ +.+.++++.++|+|++||++.+-
T Consensus 126 ~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~p 205 (325)
T PRK08618 126 DAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKTP 205 (325)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCCc
Confidence 5789999999999998887664 5677 7999999987765422 22543 34578889999999999987653
Q ss_pred CcHHHHhcCCCCeEEEEecCC---Ccccchhhhh
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHF---DNEIEVEKLK 909 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~---d~eid~~~l~ 909 (1027)
+= . +.+|+|+.++.+|.+ ..|++.+.+.
T Consensus 206 ~i--~-~~l~~G~hV~~iGs~~p~~~E~~~~~~~ 236 (325)
T PRK08618 206 VF--S-EKLKKGVHINAVGSFMPDMQELPSEAIA 236 (325)
T ss_pred ch--H-HhcCCCcEEEecCCCCcccccCCHHHHh
Confidence 22 2 568999999999997 3577765444
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00057 Score=72.89 Aligned_cols=92 Identities=16% Similarity=0.153 Sum_probs=64.1
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH-HhhcC-cEEcC---HHHHhccCCEEEecCCCcccCc
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ-AAMEG-FLVVT---MEYAKKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-A~~~G-~~v~~---~~e~l~~aDvvi~atG~~~vi~ 880 (1027)
+.+.||+|+|+|.|.+|...++.|...|++|+|++.+...... ....| +.... .++.+..+|+||.||++.. ++
T Consensus 6 l~l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~d~e-lN 84 (202)
T PRK06718 6 IDLSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATNDPR-VN 84 (202)
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCCCHH-HH
Confidence 4589999999999999999999999999999999765533322 22222 22221 2345678999999998875 56
Q ss_pred HHHHhcCCCCeEEEEecCC
Q psy15208 881 HDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~ 899 (1027)
.......+. .+++|+.-.
T Consensus 85 ~~i~~~a~~-~~lvn~~d~ 102 (202)
T PRK06718 85 EQVKEDLPE-NALFNVITD 102 (202)
T ss_pred HHHHHHHHh-CCcEEECCC
Confidence 554333444 467888543
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.001 Score=73.32 Aligned_cols=103 Identities=20% Similarity=0.283 Sum_probs=75.0
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAG 113 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVG 113 (1027)
|+++++|+. +|. -..|..++.+|... ..|+.++.||.+.-.....+.+.+ +...++.++..-|..|+.|.|
T Consensus 1 ~pLF~fhp~---~G~--~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~~~~l~~~---a~~yv~~Ir~~QP~GPy~L~G 71 (257)
T COG3319 1 PPLFCFHPA---GGS--VLAYAPLAAALGPL-LPVYGLQAPGYGAGEQPFASLDDM---AAAYVAAIRRVQPEGPYVLLG 71 (257)
T ss_pred CCEEEEcCC---CCc--HHHHHHHHHHhccC-ceeeccccCcccccccccCCHHHH---HHHHHHHHHHhCCCCCEEEEe
Confidence 467999995 232 23578899999875 999999999998644333343333 445666666666777999999
Q ss_pred echhHHHHHHHHHhcCC-cCCccEEEEEccCCC
Q psy15208 114 FSFGTFVQAKLQKRLDK-EISIKILILISVAVK 145 (1027)
Q Consensus 114 hSmGG~vAl~~A~~~p~-~~~V~gLVli~p~~~ 145 (1027)
||+||.+|+.+|.+.-. ...|..++++++..+
T Consensus 72 ~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 72 WSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999999987533 125888888887663
|
|
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0005 Score=79.02 Aligned_cols=92 Identities=17% Similarity=0.228 Sum_probs=72.8
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH--------HHh------ccCCEEEe
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME--------YAK------KYGDIFVT 871 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~--------e~l------~~aDvvi~ 871 (1027)
..|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|++ +.+.. +.+ ...|++++
T Consensus 176 ~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid 255 (361)
T cd08231 176 GAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIE 255 (361)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEE
Confidence 489999999999999999999999999 999998888887777777874 22211 111 24799999
Q ss_pred cCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 872 CTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 872 atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
++|....+. ..++.|++++.++.+|..+
T Consensus 256 ~~g~~~~~~-~~~~~l~~~G~~v~~g~~~ 283 (361)
T cd08231 256 ASGHPAAVP-EGLELLRRGGTYVLVGSVA 283 (361)
T ss_pred CCCChHHHH-HHHHHhccCCEEEEEcCCC
Confidence 998755444 5589999999999999753
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00068 Score=76.51 Aligned_cols=87 Identities=18% Similarity=0.129 Sum_probs=70.8
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhcc---CCEEEecCCCc----ccCcHHH
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKY---GDIFVTCTGNY----HVITHDH 883 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~---aDvvi~atG~~----~vi~~~~ 883 (1027)
+|+|||.|.+|..+|+.+...|.+|+++|+++.+...+...|.... +.++++.+ +|+|+.++.+. .++ .+.
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~v~-~~i 80 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTESVI-KDL 80 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHHHH-HHH
Confidence 6999999999999999999999999999999988777777787754 67777765 69999988765 233 244
Q ss_pred HhcCCCCeEEEEecCC
Q psy15208 884 MRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~ 899 (1027)
+..+++|.++++++..
T Consensus 81 ~~~l~~g~ivid~st~ 96 (299)
T PRK12490 81 YPLLSPGDIVVDGGNS 96 (299)
T ss_pred hccCCCCCEEEECCCC
Confidence 5668999999999765
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00075 Score=77.20 Aligned_cols=102 Identities=16% Similarity=0.161 Sum_probs=75.7
Q ss_pred HHHHHhhhcCccccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc----
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK---- 864 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~---- 864 (1027)
.|..+.+... .-.|++|+|.| .|.||....+.++++|++|+++-..+.+...+...|.+ +++ +.+.+.
T Consensus 130 A~~~l~~~~~-l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~ 208 (326)
T COG0604 130 AWLALFDRAG-LKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTG 208 (326)
T ss_pred HHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcC
Confidence 4455554223 34599999999 88899999999999997766665555555588889985 444 333332
Q ss_pred --cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 865 --YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 865 --~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
..|+|+++.|... +.+ .++.|++++.++.+|...
T Consensus 209 g~gvDvv~D~vG~~~-~~~-~l~~l~~~G~lv~ig~~~ 244 (326)
T COG0604 209 GKGVDVVLDTVGGDT-FAA-SLAALAPGGRLVSIGALS 244 (326)
T ss_pred CCCceEEEECCCHHH-HHH-HHHHhccCCEEEEEecCC
Confidence 4799999998774 443 589999999999999864
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00089 Score=76.25 Aligned_cols=88 Identities=20% Similarity=0.181 Sum_probs=64.1
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-----------cC---------cE-EcCHHHHhccCCEE
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-----------EG---------FL-VVTMEYAKKYGDIF 869 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-----------~G---------~~-v~~~~e~l~~aDvv 869 (1027)
++|+|+|.|.+|.++|..+...|.+|+++|++|.....+.. .| +. ..++++++.+||+|
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDlV 87 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADFI 87 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCEE
Confidence 68999999999999999999999999999999864332111 11 12 34677888999999
Q ss_pred EecCCCc----ccCcHHHHhcCCCCeEEEEecC
Q psy15208 870 VTCTGNY----HVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 870 i~atG~~----~vi~~~~~~~mk~gailvNvG~ 898 (1027)
++|.... ..+-.+.-+.++++++|....+
T Consensus 88 iEavpE~l~vK~~lf~~l~~~~~~~aIlaSnTS 120 (321)
T PRK07066 88 QESAPEREALKLELHERISRAAKPDAIIASSTS 120 (321)
T ss_pred EECCcCCHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 9987543 2222343466899997765444
|
|
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00068 Score=76.24 Aligned_cols=89 Identities=22% Similarity=0.319 Sum_probs=64.4
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH-----------hhcC-------------cEEcCHHHHhccC
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA-----------AMEG-------------FLVVTMEYAKKYG 866 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A-----------~~~G-------------~~v~~~~e~l~~a 866 (1027)
++|+|+|.|.+|.++|..+...|.+|+++|+++.+...+ ...| ..+.+..++++.|
T Consensus 5 ~~V~vIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~a 84 (295)
T PLN02545 5 KKVGVVGAGQMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEELRDA 84 (295)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHhCCC
Confidence 689999999999999999999999999999998665421 1112 2233334678899
Q ss_pred CEEEecCCCc----ccCcHHHHhcCCCCeEEE-EecCC
Q psy15208 867 DIFVTCTGNY----HVITHDHMRDMKDQAIVC-NIGHF 899 (1027)
Q Consensus 867 Dvvi~atG~~----~vi~~~~~~~mk~gailv-NvG~~ 899 (1027)
|+||+|.... ..+-.+..+.++++++++ |++..
T Consensus 85 D~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~i 122 (295)
T PLN02545 85 DFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSSI 122 (295)
T ss_pred CEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCCC
Confidence 9999997633 222223335688999886 77765
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0014 Score=69.19 Aligned_cols=95 Identities=22% Similarity=0.157 Sum_probs=65.4
Q ss_pred CccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-----cCcE--E---cC---HHHHhccCCEEE
Q psy15208 805 DVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-----EGFL--V---VT---MEYAKKYGDIFV 870 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-----~G~~--v---~~---~~e~l~~aDvvi 870 (1027)
+..+.+++++|+|. |.+|+.+++.+...|++|+++.+++.++..... .+.. . .+ +.+++.++|+||
T Consensus 23 ~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi 102 (194)
T cd01078 23 GKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVF 102 (194)
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEE
Confidence 55689999999996 999999999999999999999888765543221 1222 1 12 236678899999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
++|+.........-...+++.+++++...
T Consensus 103 ~at~~g~~~~~~~~~~~~~~~vv~D~~~~ 131 (194)
T cd01078 103 AAGAAGVELLEKLAWAPKPLAVAADVNAV 131 (194)
T ss_pred ECCCCCceechhhhcccCceeEEEEccCC
Confidence 98865542111111234557788887665
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00048 Score=77.47 Aligned_cols=92 Identities=17% Similarity=0.154 Sum_probs=72.2
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHh--ccCCEEEecCCCcccCcHHH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAK--KYGDIFVTCTGNYHVITHDH 883 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l--~~aDvvi~atG~~~vi~~~~ 883 (1027)
...|++|+|.|.|.+|+.+++.++.+|++|+++..++.+...+...|+.. .+..+.. ...|++++++|....+. ..
T Consensus 153 ~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vid~~g~~~~~~-~~ 231 (319)
T cd08242 153 ITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAESEGGGFDVVVEATGSPSGLE-LA 231 (319)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCccccccCCCCCEEEECCCChHHHH-HH
Confidence 35799999999999999999999999999999988888887777788753 2222222 34899999998754343 44
Q ss_pred HhcCCCCeEEEEecCC
Q psy15208 884 MRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~ 899 (1027)
++.+++++.++..|..
T Consensus 232 ~~~l~~~g~~v~~~~~ 247 (319)
T cd08242 232 LRLVRPRGTVVLKSTY 247 (319)
T ss_pred HHHhhcCCEEEEEccc
Confidence 7889999999987654
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta |
| >KOG2112|consensus | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0014 Score=69.08 Aligned_cols=137 Identities=15% Similarity=0.095 Sum_probs=83.4
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC--------CCC-----CCccc-------hHHH
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS--------GTY-----DSGNG-------ETDD 92 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~--------g~~-----~~~~~-------~~~D 92 (1027)
+.+|||+||.+..+.+ |..+.+.|.-....-++|-.|-.-.+. +.. .+... .+..
T Consensus 3 ~atIi~LHglGDsg~~-----~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~ 77 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSG-----WAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADN 77 (206)
T ss_pred eEEEEEEecCCCCCcc-----HHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHH
Confidence 4579999998764332 455555565567777777554322211 100 01111 1122
Q ss_pred HHHHHHHHHHh-CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC-------cCCCCCCCCcEEEEEeCCC
Q psy15208 93 MEILLRYIQKK-YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK-------KWLIPEVPKNTIIIHGELD 164 (1027)
Q Consensus 93 v~avl~~L~~~-~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-------~~~l~~i~~PvLiIhG~~D 164 (1027)
+..++++.... -+..++++-|+||||.+++..+..+|. .+.+.+..++..+ .|....-..|++..||+.|
T Consensus 78 i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~--~l~G~~~~s~~~p~~~~~~~~~~~~~~~~~i~~~Hg~~d 155 (206)
T KOG2112|consen 78 IANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPK--ALGGIFALSGFLPRASIGLPGWLPGVNYTPILLCHGTAD 155 (206)
T ss_pred HHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhcccc--ccceeeccccccccchhhccCCccccCcchhheecccCC
Confidence 22222222221 133468999999999999999999976 6777777776543 2222222688999999999
Q ss_pred CCCChHHHHhhh
Q psy15208 165 EIIPLKDVFLWA 176 (1027)
Q Consensus 165 ~iVP~~~~~~l~ 176 (1027)
++||........
T Consensus 156 ~~vp~~~g~~s~ 167 (206)
T KOG2112|consen 156 PLVPFRFGEKSA 167 (206)
T ss_pred ceeehHHHHHHH
Confidence 999998766443
|
|
| >cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00041 Score=78.84 Aligned_cols=92 Identities=14% Similarity=0.117 Sum_probs=73.1
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh---ccCCEEEecCCCccc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK---KYGDIFVTCTGNYHV 878 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l---~~aDvvi~atG~~~v 878 (1027)
..|++|+|.|.|.+|+.+++.++.+|++|++++.++.+...+...|.+ +.+ ..+.+ ...|++++++|....
T Consensus 162 ~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~d~vi~~~g~~~~ 241 (333)
T cd08296 162 KPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAKLILATAPNAKA 241 (333)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCCCCEEEECCCchHH
Confidence 578999999999999999999999999999999888787777777864 222 11222 347999999876554
Q ss_pred CcHHHHhcCCCCeEEEEecCCC
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~d 900 (1027)
+. ..++.+++++.++++|...
T Consensus 242 ~~-~~~~~l~~~G~~v~~g~~~ 262 (333)
T cd08296 242 IS-ALVGGLAPRGKLLILGAAG 262 (333)
T ss_pred HH-HHHHHcccCCEEEEEecCC
Confidence 44 4588999999999999764
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.004 Score=74.61 Aligned_cols=134 Identities=16% Similarity=0.095 Sum_probs=80.9
Q ss_pred EEEEEec--CCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHH------------HH---HHHHhCCcEE
Q psy15208 6 KFFNING--SVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQT------------LV---RVMLSLGYIS 68 (1027)
Q Consensus 6 ~~i~I~t--~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~------------la---~~La~~Gy~V 68 (1027)
..+.+.. .+..+..+++.+... ....|++|+++|++.-++ +. ..+.. +. -.+.+ -..+
T Consensus 50 Gy~~v~~~~~~~~lFyw~~~s~~~--~~~~Pl~lwlnGGPG~ss-~~-G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~ 124 (462)
T PTZ00472 50 GYFDIPGNQTDKHYFYWAFGPRNG--NPEAPVLLWMTGGPGCSS-MF-ALLAENGPCLMNETTGDIYNNTYSWNN-EAYV 124 (462)
T ss_pred EEEEeCCCCCCceEEEEEEEcCCC--CCCCCEEEEECCCCcHHH-HH-hhhccCCCeEEeCCCCceeECCccccc-ccCe
Confidence 3455543 234677777776542 246899999999763221 10 00000 00 00111 3578
Q ss_pred EEEcCC-CCCCCCCCC----CCccchHHHHHHHHHHHHHhCCC---CcEEEEEechhHHHHHHHHHhcCC--------cC
Q psy15208 69 IRMNFR-GVGASSGTY----DSGNGETDDMEILLRYIQKKYPY---LPIILAGFSFGTFVQAKLQKRLDK--------EI 132 (1027)
Q Consensus 69 la~Dlr-GhG~S~g~~----~~~~~~~~Dv~avl~~L~~~~~~---~pviLVGhSmGG~vAl~~A~~~p~--------~~ 132 (1027)
+.+|+| |+|.|.... .+....+.|+..+++.+..++|. .+++|+|||+||..+..+|.+.-+ ..
T Consensus 125 l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~i 204 (462)
T PTZ00472 125 IYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYI 204 (462)
T ss_pred EEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCcee
Confidence 889975 888886432 12345788888888877666654 789999999999998888776421 12
Q ss_pred CccEEEEEccCC
Q psy15208 133 SIKILILISVAV 144 (1027)
Q Consensus 133 ~V~gLVli~p~~ 144 (1027)
.++|+++..+..
T Consensus 205 nLkGi~IGNg~~ 216 (462)
T PTZ00472 205 NLAGLAVGNGLT 216 (462)
T ss_pred eeEEEEEecccc
Confidence 355666555443
|
|
| >cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2 | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00089 Score=73.57 Aligned_cols=100 Identities=14% Similarity=0.123 Sum_probs=66.4
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEE-EEcC----------CchhH-----HHH--------hhc---CcEEc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVW-IIEI----------DPICA-----LQA--------AME---GFLVV 857 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~Vi-V~d~----------dp~r~-----~~A--------~~~---G~~v~ 857 (1027)
+..+.|++|+|.|+|.+|+.+|+.+..+|++|+ |.|. |+... ... ... +.+..
T Consensus 33 ~~~l~g~~vaIqGfGnVG~~~a~~L~e~GakvvaVsD~~G~i~~~~Gld~~~l~~l~~~~~~~~~~v~~~~~~~~~a~~~ 112 (254)
T cd05313 33 NETLKGKRVAISGSGNVAQYAAEKLLELGAKVVTLSDSKGYVYDPDGFTGEKLAELKEIKEVRRGRVSEYAKKYGTAKYF 112 (254)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHhhcCCCCEEe
Confidence 557899999999999999999999999999988 6661 11111 000 011 24455
Q ss_pred CHHHHhc-cCCEEEecCCCcccCcHHHHhcCC-CCeEEEEecCCCcccchh
Q psy15208 858 TMEYAKK-YGDIFVTCTGNYHVITHDHMRDMK-DQAIVCNIGHFDNEIEVE 906 (1027)
Q Consensus 858 ~~~e~l~-~aDvvi~atG~~~vi~~~~~~~mk-~gailvNvG~~d~eid~~ 906 (1027)
+.++.+. .|||++-|. ..++|+.+..+.++ +++.+|- +..+..+..+
T Consensus 113 ~~~~~~~~~~DIliPcA-l~~~I~~~na~~i~~~~ak~I~-EgAN~p~t~~ 161 (254)
T cd05313 113 EGKKPWEVPCDIAFPCA-TQNEVDAEDAKLLVKNGCKYVA-EGANMPCTAE 161 (254)
T ss_pred CCcchhcCCCcEEEecc-ccccCCHHHHHHHHHcCCEEEE-eCCCCCCCHH
Confidence 5555553 699999875 45679998888884 3555543 3334444433
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t |
| >PRK14031 glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0012 Score=77.97 Aligned_cols=104 Identities=19% Similarity=0.218 Sum_probs=71.8
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEE-Ec----------CCchhHH---H------------HhhcCcEEcC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWI-IE----------IDPICAL---Q------------AAMEGFLVVT 858 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV-~d----------~dp~r~~---~------------A~~~G~~v~~ 858 (1027)
+..+.|++|+|.|+|++|...|+.|..+||+|++ .| +|+.... + +...|.+..+
T Consensus 223 g~~l~g~rVaVQGfGNVG~~aA~~L~e~GAkVVaVSD~~G~iy~~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~ga~~i~ 302 (444)
T PRK14031 223 GTDLKGKVCLVSGSGNVAQYTAEKVLELGGKVVTMSDSDGYIYDPDGIDREKLDYIMELKNLYRGRIREYAEKYGCKYVE 302 (444)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHHHhhcCCchhhhHhhcCCEEcC
Confidence 6679999999999999999999999999999886 67 5553221 0 1112455555
Q ss_pred HHHHh-ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 859 MEYAK-KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 859 ~~e~l-~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.++.+ ..|||++-|. ..+.|+.+..+.++..++.+-++..+.....+...
T Consensus 303 ~d~~~~~~cDIliPaA-l~n~I~~~na~~l~a~g~~~V~EgAN~P~t~eA~~ 353 (444)
T PRK14031 303 GARPWGEKGDIALPSA-TQNELNGDDARQLVANGVIAVSEGANMPSTPEAIK 353 (444)
T ss_pred CcccccCCCcEEeecc-cccccCHHHHHHHHhcCCeEEECCCCCCCCHHHHH
Confidence 55554 3699999876 45679999999987654434444444444444333
|
|
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0011 Score=74.56 Aligned_cols=90 Identities=18% Similarity=0.164 Sum_probs=64.5
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-----------cC-------------cEEcCHHHHhccC
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-----------EG-------------FLVVTMEYAKKYG 866 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-----------~G-------------~~v~~~~e~l~~a 866 (1027)
++|+|+|.|.+|.++|..+...|.+|+++|+++.+...+.. .| ....+-.+.+.++
T Consensus 5 ~kI~vIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 84 (292)
T PRK07530 5 KKVGVIGAGQMGNGIAHVCALAGYDVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTATDLEDLADC 84 (292)
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeCCHHHhcCC
Confidence 68999999999999999999999999999999866544321 23 2322222457899
Q ss_pred CEEEecCCCcc----cCcHHHHhcCCCCeEEE-EecCCC
Q psy15208 867 DIFVTCTGNYH----VITHDHMRDMKDQAIVC-NIGHFD 900 (1027)
Q Consensus 867 Dvvi~atG~~~----vi~~~~~~~mk~gailv-NvG~~d 900 (1027)
|+||+|..... .+-.+..+.++++++++ |++..+
T Consensus 85 D~Vieavpe~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~ 123 (292)
T PRK07530 85 DLVIEAATEDETVKRKIFAQLCPVLKPEAILATNTSSIS 123 (292)
T ss_pred CEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Confidence 99999987542 12223345678999887 666653
|
|
| >PRK12861 malic enzyme; Reviewed | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0019 Score=80.53 Aligned_cols=127 Identities=16% Similarity=0.224 Sum_probs=99.2
Q ss_pred CCccceEeecccccccccccchhhhhhHHHHHh---hhcCccccCCEEEEEcCChhHHHHHHHHHhCCC---EEEEEc--
Q psy15208 769 KLSFPAINVNDSVTKSKFDNLYGCRESLIDGIK---RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA---QVWIIE-- 840 (1027)
Q Consensus 769 ~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~---r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga---~ViV~d-- 840 (1027)
.|.+||| .|..+||+--...++. +.++..+...+|++.|+|.-|.++|+.+...|+ +++++|
T Consensus 155 ~~~ipvf----------~DD~qGTa~v~lA~llnal~~~gk~l~d~~iv~~GAGaAg~~ia~~l~~~G~~~~~i~~~D~~ 224 (764)
T PRK12861 155 RMKIPVF----------HDDQHGTAITVSAAFINGLKVVGKSIKEVKVVTSGAGAAALACLDLLVDLGLPVENIWVTDIE 224 (764)
T ss_pred cCCCCee----------ccccchHHHHHHHHHHHHHHHhCCChhHcEEEEECHhHHHHHHHHHHHHcCCChhhEEEEcCC
Confidence 5778887 4677899887666654 455777889999999999999999999999999 799888
Q ss_pred ----------CCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhh
Q psy15208 841 ----------IDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKL 908 (1027)
Q Consensus 841 ----------~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l 908 (1027)
.++.+...|... ...++.|+++.+|++|-+++ +++++++.++.|.+..++.-..-...|+..+..
T Consensus 225 Gli~~~r~~~l~~~k~~~a~~~--~~~~L~eai~~advliG~S~-~g~ft~e~v~~Ma~~PIIFaLsNPtpE~~pe~a 299 (764)
T PRK12861 225 GVVYRGRTTLMDPDKERFAQET--DARTLAEVIGGADVFLGLSA-GGVLKAEMLKAMAARPLILALANPTPEIFPELA 299 (764)
T ss_pred CeeeCCCcccCCHHHHHHHhhc--CCCCHHHHHhcCCEEEEcCC-CCCCCHHHHHHhccCCEEEECCCCCccCCHHHH
Confidence 234444455543 23589999999999998886 789999999999988887766655556665533
|
|
| >KOG3975|consensus | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.018 Score=62.31 Aligned_cols=108 Identities=14% Similarity=0.164 Sum_probs=77.2
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCC---cEEEEEcCCCCCCCCC---CC-----CCccchHHHHHHHHHH
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLG---YISIRMNFRGVGASSG---TY-----DSGNGETDDMEILLRY 99 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~G---y~Vla~DlrGhG~S~g---~~-----~~~~~~~~Dv~avl~~ 99 (1027)
..++.++++.|.+...| .|..+++.|...- +.++.+-.-||-.-+. .. ...-++.++++.-+++
T Consensus 27 ~~~~li~~IpGNPG~~g-----FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaF 101 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLG-----FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAF 101 (301)
T ss_pred CCceEEEEecCCCCchh-----HHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHH
Confidence 56889999999764333 5677777776542 4599999889877551 11 1223567777888888
Q ss_pred HHHhCCC-CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 100 IQKKYPY-LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 100 L~~~~~~-~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+++..|. .+++++|||.|+++.+.+.-.......+..++++-|.
T Consensus 102 ik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 102 IKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPT 146 (301)
T ss_pred HHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecch
Confidence 8886654 4699999999999999998755444467777777763
|
|
| >cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0009 Score=77.93 Aligned_cols=95 Identities=20% Similarity=0.159 Sum_probs=72.4
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH--------H----Hh--ccCCEEE
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME--------Y----AK--KYGDIFV 870 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~--------e----~l--~~aDvvi 870 (1027)
...|.+|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|.+ +++.. + .. ...|+|+
T Consensus 201 ~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvl 280 (384)
T cd08265 201 FRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQV 280 (384)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEE
Confidence 3579999999999999999999999999 799998888777777777763 22211 1 11 1479999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
+++|.....-.+.++.++++|+++++|..+.
T Consensus 281 d~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~ 311 (384)
T cd08265 281 EAAGAPPATIPQMEKSIAINGKIVYIGRAAT 311 (384)
T ss_pred ECCCCcHHHHHHHHHHHHcCCEEEEECCCCC
Confidence 9998642223355888999999999997643
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi |
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0011 Score=74.82 Aligned_cols=88 Identities=17% Similarity=0.074 Sum_probs=70.9
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhcc---CCEEEecCCCc----ccCcHHH
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKY---GDIFVTCTGNY----HVITHDH 883 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~---aDvvi~atG~~----~vi~~~~ 883 (1027)
+|+|+|.|.+|..+|+.+...|.+|+++|+++.+...+...|..+. +.++.+.. +|+|+.+..+. .++ ...
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~v~-~~l 80 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDATI-DEL 80 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHHHH-HHH
Confidence 6999999999999999999999999999999988777777888755 57777664 69999887654 223 234
Q ss_pred HhcCCCCeEEEEecCCC
Q psy15208 884 MRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d 900 (1027)
+..+++|.++++.+...
T Consensus 81 ~~~l~~g~ivid~st~~ 97 (301)
T PRK09599 81 APLLSPGDIVIDGGNSY 97 (301)
T ss_pred HhhCCCCCEEEeCCCCC
Confidence 56789999999997653
|
|
| >TIGR02992 ectoine_eutC ectoine utilization protein EutC | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.002 Score=73.75 Aligned_cols=98 Identities=20% Similarity=0.160 Sum_probs=74.7
Q ss_pred cCCEEEEEcCChhHHHHHHHHH-hCCC-EEEEEcCCchhHHHH-hh----cCcEE---cCHHHHhccCCEEEecCCCc-c
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMR-ALSA-QVWIIEIDPICALQA-AM----EGFLV---VTMEYAKKYGDIFVTCTGNY-H 877 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~-~~Ga-~ViV~d~dp~r~~~A-~~----~G~~v---~~~~e~l~~aDvvi~atG~~-~ 877 (1027)
..++++|+|+|..|+..++.+. ..+. +|.|+++++.++... .. .|+++ .++++++.++|+|++||+.. .
T Consensus 128 ~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~p 207 (326)
T TIGR02992 128 DSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSETP 207 (326)
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCCc
Confidence 5689999999999999999987 4775 799999998776542 21 25543 35788899999999999754 4
Q ss_pred cCcHHHHhcCCCCeEEEEecCC---Ccccchhhhh
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHF---DNEIEVEKLK 909 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~---d~eid~~~l~ 909 (1027)
++..+ .+|+|..+..+|.. ..|+|.+.+.
T Consensus 208 ~i~~~---~l~~g~~i~~vg~~~p~~rEld~~~l~ 239 (326)
T TIGR02992 208 ILHAE---WLEPGQHVTAMGSDAEHKNEIDPAVIA 239 (326)
T ss_pred EecHH---HcCCCcEEEeeCCCCCCceecCHHHHh
Confidence 56654 47999999999975 3577766544
|
Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423). |
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0011 Score=71.12 Aligned_cols=80 Identities=20% Similarity=0.282 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC---------------------
Q psy15208 91 DDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW--------------------- 147 (1027)
Q Consensus 91 ~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~--------------------- 147 (1027)
+-.+.+++||.++.. .++|.|+|.|.||-+|+.+|..+|+ |+++|+++|+.-.|
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~---i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~ 80 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ---ISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDIS 80 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS---EEEEEEES--SB--SSEEEETTE--EE----B-GG
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC---ccEEEEeCCceeEecchhcccCCCccCCcCCcChh
Confidence 446778899988633 2479999999999999999999986 99999998742100
Q ss_pred -----------------------------CCCCCCCcEEEEEeCCCCCCChHHHH
Q psy15208 148 -----------------------------LIPEVPKNTIIIHGELDEIIPLKDVF 173 (1027)
Q Consensus 148 -----------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~ 173 (1027)
.+.++++|+|++.|++|.+.|-....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a 135 (213)
T PF08840_consen 81 KFSWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMA 135 (213)
T ss_dssp G-EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHH
T ss_pred hceecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHH
Confidence 14467899999999999999987644
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >TIGR00670 asp_carb_tr aspartate carbamoyltransferase | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.087 Score=59.73 Aligned_cols=131 Identities=17% Similarity=0.182 Sum_probs=87.6
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCC---hhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYG---DVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G---~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
..+||||.=+...-|. -|.+.|. +.+..+ .+.|.+|+++|-| ++.+..+..++.+|++|.++-+...
T Consensus 116 s~vPVINa~~g~~~HP-------tQ~LaDl~Ti~e~~g-~l~g~~va~vGD~~~~~v~~Sl~~~~a~~g~~v~~~~P~~~ 187 (301)
T TIGR00670 116 SEVPVINAGDGSNQHP-------TQTLLDLYTIYEEFG-RLDGLKIALVGDLKYGRTVHSLAEALTRFGVEVYLISPEEL 187 (301)
T ss_pred CCCCEEeCCCCCCCCc-------HHHHHHHHHHHHHhC-CCCCCEEEEEccCCCCcHHHHHHHHHHHcCCEEEEECCccc
Confidence 5789998754322221 2444332 222234 4789999999996 7999999999999999999843221
Q ss_pred ----h-HHHHhhcCcE---EcCHHHHhccCCEEEecCC------C---------cccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 845 ----C-ALQAAMEGFL---VVTMEYAKKYGDIFVTCTG------N---------YHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 845 ----r-~~~A~~~G~~---v~~~~e~l~~aDvvi~atG------~---------~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
. ...+...|.. ..+++++++.+|||.+..- . .--++.+.++.+|+++++...+.-..
T Consensus 188 ~~~~~~~~~~~~~G~~v~~~~d~~~a~~~aDvvyt~~~~~er~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mHclPRg~ 267 (301)
T TIGR00670 188 RMPKEILEELKAKGIKVRETESLEEVIDEADVLYVTRIQKERFPDPEEYEKYKGSYGITLERLEAAKKGVIIMHPLPRVD 267 (301)
T ss_pred cCCHHHHHHHHHcCCEEEEECCHHHHhCCCCEEEECCccccccCCHHHHHHHhcCCeECHHHHhhcCCCCEEECCCCCCc
Confidence 1 1234445655 3578999999999987431 1 12456677788888888887777556
Q ss_pred ccchhhh
Q psy15208 902 EIEVEKL 908 (1027)
Q Consensus 902 eid~~~l 908 (1027)
||+-+.+
T Consensus 268 Ev~~~V~ 274 (301)
T TIGR00670 268 EIDPSVD 274 (301)
T ss_pred ccCHHHh
Confidence 6665533
|
Ornithine carbamoyltransferases are in the same superfamily and form an outgroup. |
| >PRK12862 malic enzyme; Reviewed | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0026 Score=79.99 Aligned_cols=129 Identities=17% Similarity=0.258 Sum_probs=100.6
Q ss_pred CCccceEeecccccccccccchhhhhhHHHHHhh---hcCccccCCEEEEEcCChhHHHHHHHHHhCCC---EEEEEcC-
Q psy15208 769 KLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKR---ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA---QVWIIEI- 841 (1027)
Q Consensus 769 ~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r---~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga---~ViV~d~- 841 (1027)
.|.+||| .|..+||+--...++.. .++..+...++++.|+|.-|.++|+.+...|+ +++++|.
T Consensus 159 ~~~ip~f----------~DD~~GTa~v~la~l~~a~~~~~~~~~~~~iv~~GaGaag~~~a~~l~~~G~~~~~i~~~D~~ 228 (763)
T PRK12862 159 RMKIPVF----------HDDQHGTAIIVAAALLNGLKLVGKDIEDVKLVASGAGAAALACLDLLVSLGVKRENIWVTDIK 228 (763)
T ss_pred cCCCceE----------ecCcccHHHHHHHHHHHHHHHhCCChhhcEEEEEChhHHHHHHHHHHHHcCCCcccEEEEcCC
Confidence 5778888 46678998876666544 45777889999999999999999999999999 7998883
Q ss_pred -----------CchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhhc
Q psy15208 842 -----------DPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKK 910 (1027)
Q Consensus 842 -----------dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~ 910 (1027)
++.+...|... ...++.|+++.+|++|-+++ +++++++.++.|.+..++.-..-...|+..+....
T Consensus 229 G~i~~~r~~~l~~~~~~~a~~~--~~~~l~e~~~~~~v~iG~s~-~g~~~~~~v~~M~~~piifalsNP~~E~~p~~a~~ 305 (763)
T PRK12862 229 GVVYEGRTELMDPWKARYAQKT--DARTLAEVIEGADVFLGLSA-AGVLKPEMVKKMAPRPLIFALANPTPEILPEEARA 305 (763)
T ss_pred CeeeCCCCccccHHHHHHhhhc--ccCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEeCCCCcccCCHHHHHH
Confidence 23344445543 34589999999999999887 78999999999998888876666656776654443
|
|
| >KOG2931|consensus | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0023 Score=70.55 Aligned_cols=128 Identities=15% Similarity=0.177 Sum_probs=93.3
Q ss_pred EEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCC-CChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC---
Q psy15208 6 KFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGT-MDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG--- 81 (1027)
Q Consensus 6 ~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs-~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g--- 81 (1027)
++..|.+..|.+++.++...+ +.+|+++=.|..+-..-+ +.......-+..+..+ |.++-+|.|||-.-..
T Consensus 23 ~e~~V~T~~G~v~V~V~Gd~~----~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p 97 (326)
T KOG2931|consen 23 QEHDVETAHGVVHVTVYGDPK----GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFP 97 (326)
T ss_pred eeeeeccccccEEEEEecCCC----CCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCC
Confidence 456788899999999887554 367889999987533221 1111111235556665 9999999999966432
Q ss_pred ---CCCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 82 ---TYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 82 ---~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
.+++.+++++++..+++++.-. .++=+|--.|+.+-.++|..+|+ +|-|+|++.+..
T Consensus 98 ~~y~yPsmd~LAd~l~~VL~~f~lk----~vIg~GvGAGAyIL~rFAl~hp~--rV~GLvLIn~~~ 157 (326)
T KOG2931|consen 98 EGYPYPSMDDLADMLPEVLDHFGLK----SVIGMGVGAGAYILARFALNHPE--RVLGLVLINCDP 157 (326)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCcc----eEEEecccccHHHHHHHHhcChh--heeEEEEEecCC
Confidence 2456667777777777776544 68889999999999999999999 899999998654
|
|
| >TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0019 Score=73.95 Aligned_cols=98 Identities=22% Similarity=0.172 Sum_probs=73.2
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CC-CEEEEEcCCchhHHHHh----hcCcE---EcCHHHHhccCCEEEecCCCc-cc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LS-AQVWIIEIDPICALQAA----MEGFL---VVTMEYAKKYGDIFVTCTGNY-HV 878 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~G-a~ViV~d~dp~r~~~A~----~~G~~---v~~~~e~l~~aDvvi~atG~~-~v 878 (1027)
.-++++|+|+|..|+..++.+.. +. -+|.|+++++.++.... ..|.. +.+.++++.++|||++||++. .+
T Consensus 127 ~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~eav~~aDiVitaT~s~~P~ 206 (325)
T TIGR02371 127 DSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPREAVEGCDILVTTTPSRKPV 206 (325)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHHHhccCCEEEEecCCCCcE
Confidence 46899999999999987766654 33 37999999998765422 23533 457889999999999998654 45
Q ss_pred CcHHHHhcCCCCeEEEEecCC---Ccccchhhhh
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHF---DNEIEVEKLK 909 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~---d~eid~~~l~ 909 (1027)
+..+ .+|+|+.+.++|.+ ..|+|.+.+.
T Consensus 207 ~~~~---~l~~g~~v~~vGs~~p~~~Eld~~~l~ 237 (325)
T TIGR02371 207 VKAD---WVSEGTHINAIGADAPGKQELDPEILK 237 (325)
T ss_pred ecHH---HcCCCCEEEecCCCCcccccCCHHHHh
Confidence 6544 57999999999976 3588866544
|
This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity. |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0012 Score=69.20 Aligned_cols=94 Identities=15% Similarity=0.212 Sum_probs=58.2
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh------------------------hcCcE-EcCHHHHhccC
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA------------------------MEGFL-VVTMEYAKKYG 866 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~------------------------~~G~~-v~~~~e~l~~a 866 (1027)
+|+|+|+|.+|+++|..+...|.+|+++|+++.....+. ..... ..+++++. .+
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~-~a 79 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAV-DA 79 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGC-TE
T ss_pred CEEEEcCCHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHh-hh
Confidence 689999999999999999999999999999986543211 11222 23455555 89
Q ss_pred CEEEecCCCcccCcHHHH----hcCCCCeEEEEecCCCcccchhhhh
Q psy15208 867 DIFVTCTGNYHVITHDHM----RDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~~~~----~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
|+||+|....--+.++.| +.++++++++..... +.+..+.
T Consensus 80 dlViEai~E~l~~K~~~~~~l~~~~~~~~ilasnTSs---l~i~~la 123 (180)
T PF02737_consen 80 DLVIEAIPEDLELKQELFAELDEICPPDTILASNTSS---LSISELA 123 (180)
T ss_dssp SEEEE-S-SSHHHHHHHHHHHHCCS-TTSEEEE--SS---S-HHHHH
T ss_pred heehhhccccHHHHHHHHHHHHHHhCCCceEEecCCC---CCHHHHH
Confidence 999999754321233333 356788888766553 4444443
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0024 Score=68.93 Aligned_cols=83 Identities=22% Similarity=0.236 Sum_probs=59.6
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCc----------hhHHHHhhcC-cEE------cCHHHHh-cc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDP----------ICALQAAMEG-FLV------VTMEYAK-KY 865 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp----------~r~~~A~~~G-~~v------~~~~e~l-~~ 865 (1027)
+..+.|++|+|.|+|.+|+.+|+.|...|++ |.|.|.+. .........+ ... .+.++.+ .+
T Consensus 18 ~~~l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 97 (217)
T cd05211 18 GDSLEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALGGSARVKVQDYFPGEAILGLD 97 (217)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhCCccccCcccccCcccceecc
Confidence 4568999999999999999999999999995 77789887 4433332222 211 1113332 36
Q ss_pred CCEEEecCCCcccCcHHHHhcCC
Q psy15208 866 GDIFVTCTGNYHVITHDHMRDMK 888 (1027)
Q Consensus 866 aDvvi~atG~~~vi~~~~~~~mk 888 (1027)
+||++.|+.. ++++.+....++
T Consensus 98 ~DVlipaA~~-~~i~~~~a~~l~ 119 (217)
T cd05211 98 VDIFAPCALG-NVIDLENAKKLK 119 (217)
T ss_pred ccEEeecccc-CccChhhHhhcC
Confidence 8999998854 478988888787
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0017 Score=60.16 Aligned_cols=84 Identities=21% Similarity=0.252 Sum_probs=61.6
Q ss_pred EEEEEcCChhHHHHHHHHHhCC---CEEEEE-cCCchhHHH-HhhcCcEEc--CHHHHhccCCEEEecCCCcccCcHH--
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALS---AQVWII-EIDPICALQ-AAMEGFLVV--TMEYAKKYGDIFVTCTGNYHVITHD-- 882 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~G---a~ViV~-d~dp~r~~~-A~~~G~~v~--~~~e~l~~aDvvi~atG~~~vi~~~-- 882 (1027)
+++|+|+|.+|..+++.+...| .+|+++ +++|.+..+ +...++.+. +..+++.++|+||.|+.... +..-
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p~~-~~~v~~ 79 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKPQQ-LPEVLS 79 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-GGG-HHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECHHH-HHHHHH
Confidence 6899999999999999999999 899954 999988766 456666644 58899999999999985443 2211
Q ss_pred HHhcCCCCeEEEEe
Q psy15208 883 HMRDMKDQAIVCNI 896 (1027)
Q Consensus 883 ~~~~mk~gailvNv 896 (1027)
.+....++.+++.+
T Consensus 80 ~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 80 EIPHLLKGKLVISI 93 (96)
T ss_dssp HHHHHHTTSEEEEE
T ss_pred HHhhccCCCEEEEe
Confidence 12335567777765
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK09414 glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0016 Score=76.93 Aligned_cols=100 Identities=16% Similarity=0.110 Sum_probs=68.7
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEE-c----------CCchhHHHHhh------------cCcEEcCHHH
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWII-E----------IDPICALQAAM------------EGFLVVTMEY 861 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~-d----------~dp~r~~~A~~------------~G~~v~~~~e 861 (1027)
+..+.|++|+|.|+|.+|+.+|+.+..+|++|+++ | +|+....+... .|.+..+.++
T Consensus 227 ~~~l~g~rVaIqGfGnVG~~~A~~L~~~GakVVavsDs~G~iyn~~GLD~~~L~~~k~~~~~~l~~~~~~~~~~~i~~~~ 306 (445)
T PRK09414 227 GDSFEGKRVVVSGSGNVAIYAIEKAQQLGAKVVTCSDSSGYVYDEEGIDLEKLKEIKEVRRGRISEYAEEFGAEYLEGGS 306 (445)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCchhhhhhhcCCeecCCcc
Confidence 66789999999999999999999999999998876 8 66543222111 0233344444
Q ss_pred Hhc-cCCEEEecCCCcccCcHHHHhcCC-CCeEEEEecCCCcccchh
Q psy15208 862 AKK-YGDIFVTCTGNYHVITHDHMRDMK-DQAIVCNIGHFDNEIEVE 906 (1027)
Q Consensus 862 ~l~-~aDvvi~atG~~~vi~~~~~~~mk-~gailvNvG~~d~eid~~ 906 (1027)
.+. ++||+|.|+- .++|+.+....++ ++|.+|- +..+..+..+
T Consensus 307 i~~~d~DVliPaAl-~n~It~~~a~~i~~~~akiIv-EgAN~p~t~~ 351 (445)
T PRK09414 307 PWSVPCDIALPCAT-QNELDEEDAKTLIANGVKAVA-EGANMPSTPE 351 (445)
T ss_pred ccccCCcEEEecCC-cCcCCHHHHHHHHHcCCeEEE-cCCCCCCCHH
Confidence 443 6999999874 5678888777773 4555553 4445555444
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0014 Score=74.24 Aligned_cols=90 Identities=16% Similarity=0.092 Sum_probs=72.3
Q ss_pred ccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC------HHHHh-----ccCCEEEecCC
Q psy15208 808 IAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT------MEYAK-----KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~------~~e~l-----~~aDvvi~atG 874 (1027)
-.|++|+|.| .|.+|..+++.++.+|++|+++..++.+...+...|++ +.+ ..+.+ ...|++++++|
T Consensus 137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G 216 (325)
T TIGR02825 137 KGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVG 216 (325)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCC
Confidence 5799999999 49999999999999999999998888888778888874 222 22222 13799999999
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
... + ...++.++++|.++++|..
T Consensus 217 ~~~-~-~~~~~~l~~~G~iv~~G~~ 239 (325)
T TIGR02825 217 GEF-S-NTVIGQMKKFGRIAICGAI 239 (325)
T ss_pred HHH-H-HHHHHHhCcCcEEEEecch
Confidence 764 3 5669999999999999864
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0013 Score=67.30 Aligned_cols=89 Identities=16% Similarity=0.130 Sum_probs=60.0
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc--C-HHHHhccCCEEEecCCCcccCcHH
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV--T-MEYAKKYGDIFVTCTGNYHVITHD 882 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~--~-~~e~l~~aDvvi~atG~~~vi~~~ 882 (1027)
+.+.|++|+|+|.|.+|...++.|...|++|+|++.+....... .....+. . .++.+..+|+||.+|++.. ++..
T Consensus 9 l~l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIsp~~~~~l~~-l~~i~~~~~~~~~~dl~~a~lViaaT~d~e-~N~~ 86 (157)
T PRK06719 9 FNLHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVSPEICKEMKE-LPYITWKQKTFSNDDIKDAHLIYAATNQHA-VNMM 86 (157)
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCccCHHHHh-ccCcEEEecccChhcCCCceEEEECCCCHH-HHHH
Confidence 46899999999999999999999999999999995433222221 1222221 1 2234678999999998875 5544
Q ss_pred HHhcCCCCeEEEEec
Q psy15208 883 HMRDMKDQAIVCNIG 897 (1027)
Q Consensus 883 ~~~~mk~gailvNvG 897 (1027)
.-...+.+ .++|+.
T Consensus 87 i~~~a~~~-~~vn~~ 100 (157)
T PRK06719 87 VKQAAHDF-QWVNVV 100 (157)
T ss_pred HHHHHHHC-CcEEEC
Confidence 33333444 466754
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0027 Score=70.67 Aligned_cols=107 Identities=17% Similarity=0.156 Sum_probs=72.5
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh-h---cC-cEEcCHHHH-hccCC
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA-M---EG-FLVVTMEYA-KKYGD 867 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-~---~G-~~v~~~~e~-l~~aD 867 (1027)
.|++..+.+. +....+|+++|+|.|.+|+.++..++..|++|+++++++.++.... . .| ....+.++. ..++|
T Consensus 102 ~G~~~~l~~~-~~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~D 180 (270)
T TIGR00507 102 IGLVSDLERL-IPLRPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMDELPLHRVD 180 (270)
T ss_pred HHHHHHHHhc-CCCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechhhhcccCcc
Confidence 5667776552 3346799999999999999999999999999999999886654321 1 12 223344433 35799
Q ss_pred EEEecCCCc--ccCcH--HHHhcCCCCeEEEEecCCCc
Q psy15208 868 IFVTCTGNY--HVITH--DHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 868 vvi~atG~~--~vi~~--~~~~~mk~gailvNvG~~d~ 901 (1027)
+||+||+.. .-+.. -..+.++++.+++++...+.
T Consensus 181 ivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~ 218 (270)
T TIGR00507 181 LIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPG 218 (270)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCC
Confidence 999999753 11110 01345788888888866543
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK14030 glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0018 Score=76.33 Aligned_cols=100 Identities=19% Similarity=0.240 Sum_probs=68.7
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEE--------Ec---CCchhH--H-HHh------------h-cCcEEc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWI--------IE---IDPICA--L-QAA------------M-EGFLVV 857 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV--------~d---~dp~r~--~-~A~------------~-~G~~v~ 857 (1027)
+..+.|++|+|-|+|.+|..+|+.|..+||+|++ +| +|+.+. + +.. . .|.+.+
T Consensus 223 g~~l~g~~vaIQGfGnVG~~aA~~L~e~GakvVavSD~~G~i~d~~Gld~~~l~~l~~~k~~~~~~~~~~~~~~~ga~~i 302 (445)
T PRK14030 223 GIDIKGKTVAISGFGNVAWGAATKATELGAKVVTISGPDGYIYDPDGISGEKIDYMLELRASGNDIVAPYAEKFPGSTFF 302 (445)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHHHHhcCccHHHHHhcCCCCEEc
Confidence 6679999999999999999999999999999988 77 554331 1 110 1 144555
Q ss_pred CHHHHhc-cCCEEEecCCCcccCcHHHHhcC-CCCeEEEEecCCCcccchh
Q psy15208 858 TMEYAKK-YGDIFVTCTGNYHVITHDHMRDM-KDQAIVCNIGHFDNEIEVE 906 (1027)
Q Consensus 858 ~~~e~l~-~aDvvi~atG~~~vi~~~~~~~m-k~gailvNvG~~d~eid~~ 906 (1027)
+.++.+. .|||++-|. ..+.|+.+..+.+ +++|.+|-= ..+.....+
T Consensus 303 ~~~~~~~~~cDVliPcA-l~n~I~~~na~~l~~~~ak~V~E-gAN~p~t~e 351 (445)
T PRK14030 303 AGKKPWEQKVDIALPCA-TQNELNGEDADKLIKNGVLCVAE-VSNMGCTAE 351 (445)
T ss_pred CCccceeccccEEeecc-ccccCCHHHHHHHHHcCCeEEEe-CCCCCCCHH
Confidence 5555553 699999765 4567998888887 444555543 334444433
|
|
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0015 Score=81.24 Aligned_cols=92 Identities=16% Similarity=0.214 Sum_probs=70.1
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHh-ccCCEEEecCCCc---ccCcHHH
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAK-KYGDIFVTCTGNY---HVITHDH 883 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l-~~aDvvi~atG~~---~vi~~~~ 883 (1027)
.-++|+|||+|.+|..+|+.++..|.+|++++++..+ ..|...|+.. .+.++++ .++|+|+.|+... .++..-.
T Consensus 51 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~-~~A~~~Gv~~~~d~~e~~~~~aDvViLavP~~~~~~vl~~l~ 129 (667)
T PLN02712 51 TQLKIAIIGFGNYGQFLAKTLISQGHTVLAHSRSDHS-LAARSLGVSFFLDPHDLCERHPDVILLCTSIISTENVLKSLP 129 (667)
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHcCCEEeCCHHHHhhcCCCEEEEcCCHHHHHHHHHhhh
Confidence 4468999999999999999999999999999987544 4566778764 4566655 4699999998744 2333222
Q ss_pred HhcCCCCeEEEEecCCCc
Q psy15208 884 MRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d~ 901 (1027)
+..|++++++++++....
T Consensus 130 ~~~l~~g~iVvDv~SvK~ 147 (667)
T PLN02712 130 LQRLKRNTLFVDVLSVKE 147 (667)
T ss_pred hhcCCCCeEEEECCCCcH
Confidence 345899999999987653
|
|
| >PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0036 Score=78.25 Aligned_cols=129 Identities=20% Similarity=0.225 Sum_probs=98.9
Q ss_pred CCccceEeecccccccccccchhhhhhHHHHHhh---hcCccccCCEEEEEcCChhHHHHHHHHHhCCC---EEEEEcCC
Q psy15208 769 KLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKR---ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA---QVWIIEID 842 (1027)
Q Consensus 769 ~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r---~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga---~ViV~d~d 842 (1027)
.|.+||| .|..+||+--...++.. .++..+...++++.|+|.-|.++|+.+...|+ +++++|..
T Consensus 151 ~~~ip~f----------~DD~~GTa~v~lA~l~na~~~~~~~~~~~~iv~~GaGaag~~~a~~l~~~G~~~~~i~~~D~~ 220 (752)
T PRK07232 151 RMDIPVF----------HDDQHGTAIISAAALLNALELVGKKIEDVKIVVSGAGAAAIACLNLLVALGAKKENIIVCDSK 220 (752)
T ss_pred hcCCCee----------ccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECccHHHHHHHHHHHHcCCCcccEEEEcCC
Confidence 4677777 46778998877666543 55677889999999999999999999999999 78888743
Q ss_pred ------------chhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhhc
Q psy15208 843 ------------PICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKK 910 (1027)
Q Consensus 843 ------------p~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~ 910 (1027)
+.+...|.. -...++.++++.+|++|-+++ +++++++.++.|.+..++.-..-...|+..+....
T Consensus 221 G~i~~~r~~~~~~~k~~~a~~--~~~~~l~~~i~~~~v~iG~s~-~g~~~~~~v~~M~~~piifalsNP~~E~~p~~a~~ 297 (752)
T PRK07232 221 GVIYKGRTEGMDEWKAAYAVD--TDARTLAEAIEGADVFLGLSA-AGVLTPEMVKSMADNPIIFALANPDPEITPEEAKA 297 (752)
T ss_pred CeecCCCcccccHHHHHHhcc--CCCCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEecCCCCccCCHHHHHH
Confidence 223333433 223579999999999998887 78999999999998888876666666777664443
|
|
| >PRK06545 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0011 Score=76.83 Aligned_cols=92 Identities=26% Similarity=0.385 Sum_probs=67.8
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-----cCHHHHhccCCEEEecCCCcccCcH-HHH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-----VTMEYAKKYGDIFVTCTGNYHVITH-DHM 884 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-----~~~~e~l~~aDvvi~atG~~~vi~~-~~~ 884 (1027)
++|+|+|.|.||..+|+.++..|.+|.++++++.....+...+..+ .++++++.++|+||.|+....+..- +.+
T Consensus 1 ~~I~iIG~GliG~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~~~~~vl~~l 80 (359)
T PRK06545 1 RTVLIVGLGLIGGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVDATAALLAEL 80 (359)
T ss_pred CeEEEEEeCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHHHHHHHHHHH
Confidence 5799999999999999999999999999988876554443434322 3467778899999999876532110 123
Q ss_pred h--cCCCCeEEEEecCCCcc
Q psy15208 885 R--DMKDQAIVCNIGHFDNE 902 (1027)
Q Consensus 885 ~--~mk~gailvNvG~~d~e 902 (1027)
. .+++++++.++|....+
T Consensus 81 ~~~~l~~~~ivtDv~SvK~~ 100 (359)
T PRK06545 81 ADLELKPGVIVTDVGSVKGA 100 (359)
T ss_pred hhcCCCCCcEEEeCccccHH
Confidence 3 37889999999987643
|
|
| >PRK00779 ornithine carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.057 Score=61.28 Aligned_cols=130 Identities=18% Similarity=0.091 Sum_probs=89.7
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhH
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICA 846 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~ 846 (1027)
..+||||.-++ .-| ..|++.|. +.+..| .+.|.+|+++|- +++-+..+..++.+|++|.++-+.....
T Consensus 119 ~~vPVINag~~-~~H-------PtQaL~Dl~Ti~e~~g-~l~gl~i~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~ 189 (304)
T PRK00779 119 STVPVINGLTD-LSH-------PCQILADLLTIYEHRG-SLKGLKVAWVGDGNNVANSLLLAAALLGFDLRVATPKGYEP 189 (304)
T ss_pred CCCCEEeCCCC-CCC-------hHHHHHHHHHHHHHhC-CcCCcEEEEEeCCCccHHHHHHHHHHcCCEEEEECCcccCC
Confidence 67999998642 111 23555544 333334 478999999998 6688999999999999999884322111
Q ss_pred ---H---HHhhcCcE---EcCHHHHhccCCEEEecC----C------------CcccCcHHHHhcCCCCeEEEEecCC--
Q psy15208 847 ---L---QAAMEGFL---VVTMEYAKKYGDIFVTCT----G------------NYHVITHDHMRDMKDQAIVCNIGHF-- 899 (1027)
Q Consensus 847 ---~---~A~~~G~~---v~~~~e~l~~aDvvi~at----G------------~~~vi~~~~~~~mk~gailvNvG~~-- 899 (1027)
. .+...|.. ..+++++++++|+|.+.. + ..--++.+.++.+|+++++...+..
T Consensus 190 ~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~l~~~~~~~ivmHplP~~R 269 (304)
T PRK00779 190 DPEIVEKIAKETGASIEVTHDPKEAVKGADVVYTDVWVSMGQEAEAEERLKAFAPYQVNEELMALAKPDAIFMHCLPAHR 269 (304)
T ss_pred CHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEecCccccccchhHHHHHHHhcccCCCHHHHHhcCCCeEEecCCCccC
Confidence 1 13445643 357899999999998642 1 1235777888889999999998884
Q ss_pred Ccccchhhh
Q psy15208 900 DNEIEVEKL 908 (1027)
Q Consensus 900 d~eid~~~l 908 (1027)
..|++-+.+
T Consensus 270 ~~Ei~~~V~ 278 (304)
T PRK00779 270 GEEVTDEVI 278 (304)
T ss_pred CCcccHHHh
Confidence 567776644
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0094 Score=62.24 Aligned_cols=68 Identities=10% Similarity=0.118 Sum_probs=51.7
Q ss_pred CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC-----CC--------------C--CCCc--EEEEEeCC
Q psy15208 107 LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL-----IP--------------E--VPKN--TIIIHGEL 163 (1027)
Q Consensus 107 ~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~-----l~--------------~--i~~P--vLiIhG~~ 163 (1027)
+++.|+|+|+||+.|..++.++.- ..|++.|++.++. +. . +..| .+++..+.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~-----~aVLiNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~~~~p~r~~vllq~g 134 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGI-----RQVIFNPNLFPEENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVILSRN 134 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCC-----CEEEECCCCChHHHHHHHhCCCcchhhhhHHHHHHhhhcCcccEEEEEeCC
Confidence 478999999999999999999843 4788898876552 11 0 2334 58999999
Q ss_pred CCCCChHHHHhhhCCC
Q psy15208 164 DEIIPLKDVFLWANPL 179 (1027)
Q Consensus 164 D~iVP~~~~~~l~~~~ 179 (1027)
|++..+..+.......
T Consensus 135 DEvLDyr~a~~~y~~~ 150 (180)
T PRK04940 135 DEVLDSQRTAEELHPY 150 (180)
T ss_pred CcccCHHHHHHHhccC
Confidence 9999999888655543
|
|
| >PRK08507 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0017 Score=72.35 Aligned_cols=89 Identities=18% Similarity=0.264 Sum_probs=67.3
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCchhHHHHhhcCcE--EcCHHHHhccCCEEEecCCCcccCc--HHHHh
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDPICALQAAMEGFL--VVTMEYAKKYGDIFVTCTGNYHVIT--HDHMR 885 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~~A~~~G~~--v~~~~e~l~~aDvvi~atG~~~vi~--~~~~~ 885 (1027)
+|+|+|+|.+|..+|..++..|. +|+++|+++.+...+...|+. ..+.+++. ++|+||.|+....+.. .+...
T Consensus 2 ~I~iIG~G~mG~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~~~-~aD~Vilavp~~~~~~~~~~l~~ 80 (275)
T PRK08507 2 KIGIIGLGLMGGSLGLALKEKGLISKVYGYDHNELHLKKALELGLVDEIVSFEELK-KCDVIFLAIPVDAIIEILPKLLD 80 (275)
T ss_pred EEEEEccCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHHHh-cCCEEEEeCcHHHHHHHHHHHhc
Confidence 69999999999999999998885 799999998877777777763 34555654 5999999987653222 12234
Q ss_pred cCCCCeEEEEecCCCcc
Q psy15208 886 DMKDQAIVCNIGHFDNE 902 (1027)
Q Consensus 886 ~mk~gailvNvG~~d~e 902 (1027)
++++++++.+|....+
T Consensus 81 -l~~~~iv~d~gs~k~~ 96 (275)
T PRK08507 81 -IKENTTIIDLGSTKAK 96 (275)
T ss_pred -cCCCCEEEECccchHH
Confidence 7889999998886443
|
|
| >PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.002 Score=77.97 Aligned_cols=89 Identities=17% Similarity=0.194 Sum_probs=65.9
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH-----------hhcC-------------cEE-cCHHHHhcc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA-----------AMEG-------------FLV-VTMEYAKKY 865 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A-----------~~~G-------------~~v-~~~~e~l~~ 865 (1027)
++|+|||.|..|.++|..+...|..|+++|+++.....+ ...| ... .++ +.+..
T Consensus 8 ~~V~VIGaG~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~-~~~~~ 86 (507)
T PRK08268 8 ATVAVIGAGAMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEAL-ADLAD 86 (507)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCH-HHhCC
Confidence 789999999999999999999999999999999766552 3344 333 344 44679
Q ss_pred CCEEEecCCCcccCcHHH---Hh-cCCCCeEEE-EecCCC
Q psy15208 866 GDIFVTCTGNYHVITHDH---MR-DMKDQAIVC-NIGHFD 900 (1027)
Q Consensus 866 aDvvi~atG~~~vi~~~~---~~-~mk~gailv-NvG~~d 900 (1027)
+|+||+|.....-+.... ++ .++++++++ |++..+
T Consensus 87 aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntStl~ 126 (507)
T PRK08268 87 CDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSLS 126 (507)
T ss_pred CCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCCCC
Confidence 999999986543233332 33 458899995 887764
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.002 Score=72.30 Aligned_cols=88 Identities=13% Similarity=0.169 Sum_probs=63.3
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH-----------HhhcCc-------------E-EcCHHHHhcc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ-----------AAMEGF-------------L-VVTMEYAKKY 865 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-----------A~~~G~-------------~-v~~~~e~l~~ 865 (1027)
++|+|+|.|.+|.++|..+...|.+|+++|++|..... +...|. . ..++ +++..
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~~~ 84 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDL-GDFAD 84 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCH-HHhCC
Confidence 48999999999999999999999999999999976544 222332 1 2234 55789
Q ss_pred CCEEEecCCCcccCcHH---HHhcC--CCCeEEEEecCC
Q psy15208 866 GDIFVTCTGNYHVITHD---HMRDM--KDQAIVCNIGHF 899 (1027)
Q Consensus 866 aDvvi~atG~~~vi~~~---~~~~m--k~gailvNvG~~ 899 (1027)
+|+||+|....--+..+ .++.+ ++++++++....
T Consensus 85 ~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snTS~ 123 (286)
T PRK07819 85 RQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNTSS 123 (286)
T ss_pred CCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 99999997644212222 24555 789998876554
|
|
| >PLN02527 aspartate carbamoyltransferase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.12 Score=58.63 Aligned_cols=131 Identities=15% Similarity=0.145 Sum_probs=84.3
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCC---hhHHHHHHHHHhC-CCEEEEEcCCc
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYG---DVGKGSAQAMRAL-SAQVWIIEIDP 843 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G---~IG~~vA~~a~~~-Ga~ViV~d~dp 843 (1027)
..+||||.=+...-| .-|.+.|. +.+..+ .+.|.+|+++|-+ ++.+..+..+..+ |++|.++-+..
T Consensus 117 ~~vPVINa~~g~~~H-------PtQ~LaDl~Ti~e~~g-~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~ 188 (306)
T PLN02527 117 AEIPVINAGDGPGQH-------PTQALLDVYTIQREIG-RLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDV 188 (306)
T ss_pred CCCCEEECCCCCCCC-------hHHHHHHHHHHHHHhC-CcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCc
Confidence 678999874432222 12444433 222234 4789999999976 6788888888887 99998874322
Q ss_pred h-----hHHHHhhcCcE---EcCHHHHhccCCEEEecCCC----------------cccCcHHHHhcCCCCeEEEEecCC
Q psy15208 844 I-----CALQAAMEGFL---VVTMEYAKKYGDIFVTCTGN----------------YHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 844 ~-----r~~~A~~~G~~---v~~~~e~l~~aDvvi~atG~----------------~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
. -...+...|.. ..+++++++++|||.+.... .-.++.+.++..|+++++...+.-
T Consensus 189 ~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~~q~e~~~~~~~~~~~~~~~y~v~~~ll~~a~~~~ivmHclPR 268 (306)
T PLN02527 189 VKMKDDIKDYLTSKGVEWEESSDLMEVASKCDVLYQTRIQRERFGERIDLYEAARGKYIVDKKVMDVLPKHAVVMHPLPR 268 (306)
T ss_pred cCCCHHHHHHHHHcCCEEEEEcCHHHHhCCCCEEEECCcchhhhcchHHHHHHhCCCceECHHHHhccCCCCEEECCCCC
Confidence 1 12224444554 35799999999999874321 124555667778888888877765
Q ss_pred Ccccchhhh
Q psy15208 900 DNEIEVEKL 908 (1027)
Q Consensus 900 d~eid~~~l 908 (1027)
..||+-+.+
T Consensus 269 g~Ei~~~V~ 277 (306)
T PLN02527 269 LDEITTDVD 277 (306)
T ss_pred cccccHHHh
Confidence 566665533
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0039 Score=69.93 Aligned_cols=83 Identities=13% Similarity=0.197 Sum_probs=60.1
Q ss_pred hhHHHHHhhhcCc-cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHH-hhcC----cEEc-C---HHHH
Q psy15208 794 ESLIDGIKRATDV-MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQA-AMEG----FLVV-T---MEYA 862 (1027)
Q Consensus 794 ~s~~~~i~r~t~~-~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A-~~~G----~~v~-~---~~e~ 862 (1027)
.+++.++.+.... .+.|++|+|+|+|..|++++..|+..|+ +|+|+++++.++..- ...+ +... . +.+.
T Consensus 108 ~G~~~~l~~~~~~~~~~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~ 187 (282)
T TIGR01809 108 DGIAGALANIGKFEPLAGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAI 187 (282)
T ss_pred HHHHHHHHhhCCccccCCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhc
Confidence 5677777653212 4789999999999999999999999998 799999998776542 2221 1111 1 2244
Q ss_pred hccCCEEEecCCCc
Q psy15208 863 KKYGDIFVTCTGNY 876 (1027)
Q Consensus 863 l~~aDvvi~atG~~ 876 (1027)
+.++|+||+||+..
T Consensus 188 ~~~~DiVInaTp~g 201 (282)
T TIGR01809 188 EKAAEVLVSTVPAD 201 (282)
T ss_pred ccCCCEEEECCCCC
Confidence 57899999999654
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0015 Score=76.72 Aligned_cols=124 Identities=18% Similarity=0.115 Sum_probs=82.5
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCC-cEEEEEcCCC--CCCCCC-CCC-----Cc
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLG-YISIRMNFRG--VGASSG-TYD-----SG 86 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~G-y~Vla~DlrG--hG~S~g-~~~-----~~ 86 (1027)
-++.=+|.|+. ..+..|++|++||++...|+.....+ --..|+++| +-|+.+++|- .|.-.. .+. ..
T Consensus 79 CL~LNIwaP~~--~a~~~PVmV~IHGG~y~~Gs~s~~~y--dgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~ 154 (491)
T COG2272 79 CLYLNIWAPEV--PAEKLPVMVYIHGGGYIMGSGSEPLY--DGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFAS 154 (491)
T ss_pred ceeEEeeccCC--CCCCCcEEEEEeccccccCCCccccc--ChHHHHhcCCEEEEEeCcccccceeeehhhccccccccc
Confidence 56777888882 13568999999998877777665434 345678888 9999999972 121110 000 01
Q ss_pred cchHHHHHHHHHHHHHh---CCCC--cEEEEEechhHHHHHHHHHhcCC-cCCccEEEEEccCC
Q psy15208 87 NGETDDMEILLRYIQKK---YPYL--PIILAGFSFGTFVQAKLQKRLDK-EISIKILILISVAV 144 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~---~~~~--pviLVGhSmGG~vAl~~A~~~p~-~~~V~gLVli~p~~ 144 (1027)
..-+.|...+++|++++ ++.+ .|.|+|+|.|++.++.+.+. |. ...++.+|+.|+..
T Consensus 155 n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 155 NLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAA 217 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCC
Confidence 12478888999999873 5554 49999999999988776654 43 12355566666554
|
|
| >TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0016 Score=73.15 Aligned_cols=86 Identities=15% Similarity=0.197 Sum_probs=70.1
Q ss_pred EEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCCCcccCc------HHHHhcC
Q psy15208 815 IIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTGNYHVIT------HDHMRDM 887 (1027)
Q Consensus 815 ViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG~~~vi~------~~~~~~m 887 (1027)
+||.|.+|..+|+.+...|.+|+++|+++.+.......|.... +..+++.++|+||.|..+...+. ......+
T Consensus 1 ~IGlG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~~~~ 80 (288)
T TIGR01692 1 FIGLGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGILPKV 80 (288)
T ss_pred CCcccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHhhcC
Confidence 5899999999999999999999999999988777777787644 68888999999999987643222 2334678
Q ss_pred CCCeEEEEecCCC
Q psy15208 888 KDQAIVCNIGHFD 900 (1027)
Q Consensus 888 k~gailvNvG~~d 900 (1027)
++|.++++++..+
T Consensus 81 ~~g~~vid~st~~ 93 (288)
T TIGR01692 81 AKGSLLIDCSTID 93 (288)
T ss_pred CCCCEEEECCCCC
Confidence 9999999998654
|
This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446). |
| >PRK06823 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0038 Score=71.10 Aligned_cols=98 Identities=16% Similarity=0.249 Sum_probs=74.7
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHH----HhhcCcEE---cCHHHHhccCCEEEecCCCc-cc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQ----AAMEGFLV---VTMEYAKKYGDIFVTCTGNY-HV 878 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~----A~~~G~~v---~~~~e~l~~aDvvi~atG~~-~v 878 (1027)
.-++++|+|+|..++..++.+.. +.. +|.|+++++.++.. ....|+.+ .+.++++.++|||++||+.. .+
T Consensus 127 d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIV~taT~s~~P~ 206 (315)
T PRK06823 127 HVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTTLDAAEVAHAANLIVTTTPSREPL 206 (315)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEECCHHHHhcCCCEEEEecCCCCce
Confidence 46899999999999988877765 333 79999999987653 22225543 36889999999999988754 56
Q ss_pred CcHHHHhcCCCCeEEEEecCC---Ccccchhhhh
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHF---DNEIEVEKLK 909 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~---d~eid~~~l~ 909 (1027)
+..+ .+|+|+.+..+|.+ ..|+|.+.+.
T Consensus 207 ~~~~---~l~~G~hi~~iGs~~p~~~Eld~~~l~ 237 (315)
T PRK06823 207 LQAE---DIQPGTHITAVGADSPGKQELDAELVA 237 (315)
T ss_pred eCHH---HcCCCcEEEecCCCCcccccCCHHHHh
Confidence 6644 58999999999986 3588876554
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0046 Score=74.62 Aligned_cols=171 Identities=15% Similarity=0.140 Sum_probs=116.7
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
.+++++++..+| +++.-+..-++....++.|++|+.-| ..+.+.+ ..|....-.|.++|+.-...=-||=|.-.+.
T Consensus 418 ~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYG--aYG~s~~-p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~ 494 (682)
T COG1770 418 VSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYG--AYGISMD-PSFSIARLSLLDRGFVYAIAHVRGGGELGRA 494 (682)
T ss_pred EEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEec--cccccCC-cCcccceeeeecCceEEEEEEeecccccChH
Confidence 456778887777 77776654433222356788777555 4554443 3454444457788997666666887665532
Q ss_pred C------CCccchHHHHHHHHHHHHHh-CC-CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-------
Q psy15208 83 Y------DSGNGETDDMEILLRYIQKK-YP-YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------- 147 (1027)
Q Consensus 83 ~------~~~~~~~~Dv~avl~~L~~~-~~-~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------- 147 (1027)
+ ..=.+-..|..+..++|.+. +. ...++++|-|.||++.-.++.+.|+ .++++|+--|.+...
T Consensus 495 WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~--lf~~iiA~VPFVDvltTMlD~s 572 (682)
T COG1770 495 WYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPD--LFAGIIAQVPFVDVLTTMLDPS 572 (682)
T ss_pred HHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChh--hhhheeecCCccchhhhhcCCC
Confidence 2 11134578888888888774 22 2369999999999999999999999 789999998864311
Q ss_pred ---------------------------CCC----CCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 148 ---------------------------LIP----EVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 148 ---------------------------~l~----~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
+.. +-..|+|+..|..|+-|....-.+|..++
T Consensus 573 lPLT~~E~~EWGNP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkL 635 (682)
T COG1770 573 LPLTVTEWDEWGNPLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKL 635 (682)
T ss_pred CCCCccchhhhCCcCCHHHHHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHH
Confidence 011 22367899999999999988877776554
|
|
| >PRK06141 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0034 Score=71.43 Aligned_cols=98 Identities=23% Similarity=0.217 Sum_probs=71.7
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHHHhhc----C--cEE-cCHHHHhccCCEEEecCCCc-c
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQAAME----G--FLV-VTMEYAKKYGDIFVTCTGNY-H 877 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~A~~~----G--~~v-~~~~e~l~~aDvvi~atG~~-~ 877 (1027)
...++|+|+|+|..|+.+++.+.. ++. +|.|+++++.++.+.... | +.+ .+.++++.++|||++||+.. .
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~~p 202 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLSTEP 202 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCCCC
Confidence 357999999999999999976554 564 799999998776653322 4 333 46788899999999988754 4
Q ss_pred cCcHHHHhcCCCCeEEEEecCCC---cccchhhh
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFD---NEIEVEKL 908 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d---~eid~~~l 908 (1027)
++.. +.+++|+.+.-+|... .|++...+
T Consensus 203 vl~~---~~l~~g~~i~~ig~~~~~~~El~~~~~ 233 (314)
T PRK06141 203 LVRG---EWLKPGTHLDLVGNFTPDMRECDDEAI 233 (314)
T ss_pred EecH---HHcCCCCEEEeeCCCCcccccCCHHHH
Confidence 5554 4579999777777652 46775543
|
|
| >PLN02477 glutamate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0025 Score=74.72 Aligned_cols=97 Identities=21% Similarity=0.257 Sum_probs=66.8
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEE-EEcCC----------chhHHHHh--------hcCcEEcCHHHHh-
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVW-IIEID----------PICALQAA--------MEGFLVVTMEYAK- 863 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~Vi-V~d~d----------p~r~~~A~--------~~G~~v~~~~e~l- 863 (1027)
.+..+.|++|+|.|+|.+|+.+|+.|...|++|+ |.|.+ +....+.. ..+.+.++.++.+
T Consensus 200 ~g~~l~g~~VaIqGfGnVG~~~A~~L~e~GakVVaVsD~~G~iy~~~GLD~~~L~~~k~~~g~l~~~~~a~~i~~~e~l~ 279 (410)
T PLN02477 200 HGKSIAGQTFVIQGFGNVGSWAAQLIHEKGGKIVAVSDITGAVKNENGLDIPALRKHVAEGGGLKGFPGGDPIDPDDILV 279 (410)
T ss_pred cCCCccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCchhccccceEecCcccee
Confidence 4667899999999999999999999999999988 77876 32222211 1122344445554
Q ss_pred ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccc
Q psy15208 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIE 904 (1027)
Q Consensus 864 ~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid 904 (1027)
..+||++-|. ..++|+.+....++-..++ +..+..+.
T Consensus 280 ~~~DvliP~A-l~~~I~~~na~~i~ak~I~---egAN~p~t 316 (410)
T PLN02477 280 EPCDVLIPAA-LGGVINKENAADVKAKFIV---EAANHPTD 316 (410)
T ss_pred ccccEEeecc-ccccCCHhHHHHcCCcEEE---eCCCCCCC
Confidence 3799999775 4457999888888644333 44455553
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0028 Score=70.42 Aligned_cols=126 Identities=15% Similarity=0.190 Sum_probs=81.5
Q ss_pred EEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCC-CChHHHH-HHHHHHHhCCcEEEEEcCCCCCCCCC----
Q psy15208 8 FNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGT-MDNKVVQ-TLVRVMLSLGYISIRMNFRGVGASSG---- 81 (1027)
Q Consensus 8 i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs-~~~~~~~-~la~~La~~Gy~Vla~DlrGhG~S~g---- 81 (1027)
..++++.|.+.+.++...+ +.+|++|-.|=.|.+.-+ +. ..+. .-.+.+. +.|.++=+|.|||..-..
T Consensus 2 h~v~t~~G~v~V~v~G~~~----~~kp~ilT~HDvGlNh~scF~-~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~ 75 (283)
T PF03096_consen 2 HDVETPYGSVHVTVQGDPK----GNKPAILTYHDVGLNHKSCFQ-GFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPE 75 (283)
T ss_dssp EEEEETTEEEEEEEESS------TTS-EEEEE--TT--HHHHCH-HHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----T
T ss_pred ceeccCceEEEEEEEecCC----CCCceEEEeccccccchHHHH-HHhcchhHHHHh-hceEEEEEeCCCCCCCcccccc
Confidence 4688999999999886654 368999999975321111 11 1111 1234444 479999999999976432
Q ss_pred --CCCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 82 --TYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 82 --~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
.+++.+.+++++..+++++.-+ .++-+|--.|+.+-.++|..+|+ ++.|+|++++...
T Consensus 76 ~y~yPsmd~LAe~l~~Vl~~f~lk----~vIg~GvGAGAnIL~rfAl~~p~--~V~GLiLvn~~~~ 135 (283)
T PF03096_consen 76 GYQYPSMDQLAEMLPEVLDHFGLK----SVIGFGVGAGANILARFALKHPE--RVLGLILVNPTCT 135 (283)
T ss_dssp T-----HHHHHCTHHHHHHHHT-------EEEEEETHHHHHHHHHHHHSGG--GEEEEEEES---S
T ss_pred cccccCHHHHHHHHHHHHHhCCcc----EEEEEeeccchhhhhhccccCcc--ceeEEEEEecCCC
Confidence 2456677788888888877655 79999999999999999999999 8999999998653
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >PTZ00079 NADP-specific glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0029 Score=74.59 Aligned_cols=101 Identities=18% Similarity=0.201 Sum_probs=70.2
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEE-EEcCC----------chhH---HH----------Hh---hcCcEE
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVW-IIEID----------PICA---LQ----------AA---MEGFLV 856 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~Vi-V~d~d----------p~r~---~~----------A~---~~G~~v 856 (1027)
.+..+.|++|+|-|+|.+|..+|+.|..+|++|+ |.|.+ +... .+ .. ..|.+.
T Consensus 231 ~~~~l~Gk~VaVqG~GnVg~~aa~~L~e~GakVVavSD~~G~iy~~~Gld~~~l~~l~~~k~~~~g~i~~~~~~~~~a~~ 310 (454)
T PTZ00079 231 LNDSLEGKTVVVSGSGNVAQYAVEKLLQLGAKVLTMSDSDGYIHEPNGFTKEKLAYLMDLKNVKRGRLKEYAKHSSTAKY 310 (454)
T ss_pred cCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCCcEECCCCCCHHHHHHHHHHHhhcCCcHHhhhhccCCcEE
Confidence 3667999999999999999999999999999988 88877 3222 00 00 114444
Q ss_pred cCHHHHh-ccCCEEEecCCCcccCcHHHHhcC-CCCeEEEEecCCCcccchh
Q psy15208 857 VTMEYAK-KYGDIFVTCTGNYHVITHDHMRDM-KDQAIVCNIGHFDNEIEVE 906 (1027)
Q Consensus 857 ~~~~e~l-~~aDvvi~atG~~~vi~~~~~~~m-k~gailvNvG~~d~eid~~ 906 (1027)
++.++.+ ..|||++-|. ..+.|+.+..+.+ +.++.+|-=|. +..+..+
T Consensus 311 ~~~~~~~~~~cDI~iPcA-~~n~I~~~~a~~l~~~~ak~V~EgA-N~p~t~e 360 (454)
T PTZ00079 311 VPGKKPWEVPCDIAFPCA-TQNEINLEDAKLLIKNGCKLVAEGA-NMPTTIE 360 (454)
T ss_pred eCCcCcccCCccEEEecc-ccccCCHHHHHHHHHcCCeEEEecC-CCCCCHH
Confidence 4444444 3699999775 4567898887766 77777665443 4444444
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0026 Score=72.46 Aligned_cols=87 Identities=17% Similarity=0.142 Sum_probs=68.7
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhh-cCcE-Ec-----CHHHHh-----ccCCEEEecCCC
Q psy15208 810 GKIAVIIGY-GDVGKGSAQAMRALSA-QVWIIEIDPICALQAAM-EGFL-VV-----TMEYAK-----KYGDIFVTCTGN 875 (1027)
Q Consensus 810 Gk~VvViG~-G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~-~G~~-v~-----~~~e~l-----~~aDvvi~atG~ 875 (1027)
|++|+|.|. |.+|..+++.++.+|+ +|++++.++.+...+.. .|++ +. ++.+.+ ...|++++++|.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~ 234 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGG 234 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCc
Confidence 499999998 9999999999999999 89999888877666654 7764 22 122222 247999999987
Q ss_pred cccCcHHHHhcCCCCeEEEEecC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~ 898 (1027)
.. + .+.++.|+++|.++.+|.
T Consensus 235 ~~-~-~~~~~~l~~~G~iv~~G~ 255 (345)
T cd08293 235 EI-S-DTVISQMNENSHIILCGQ 255 (345)
T ss_pred HH-H-HHHHHHhccCCEEEEEee
Confidence 64 3 566999999999999985
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0028 Score=73.65 Aligned_cols=93 Identities=14% Similarity=0.178 Sum_probs=72.2
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-------HHHh-----ccCCEEEec
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-------EYAK-----KYGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-------~e~l-----~~aDvvi~a 872 (1027)
...|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|++ +.+. .+.+ ...|+++++
T Consensus 188 ~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~ 267 (373)
T cd08299 188 VTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEV 267 (373)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccccchhHHHHHHHHhCCCCeEEEEC
Confidence 3579999999999999999999999999 899999999888888888874 2321 1211 148999999
Q ss_pred CCCcccCcHHHHhc-CCCCeEEEEecCCC
Q psy15208 873 TGNYHVITHDHMRD-MKDQAIVCNIGHFD 900 (1027)
Q Consensus 873 tG~~~vi~~~~~~~-mk~gailvNvG~~d 900 (1027)
+|....+... +.. +++++.++.+|..+
T Consensus 268 ~g~~~~~~~~-~~~~~~~~G~~v~~g~~~ 295 (373)
T cd08299 268 IGRLDTMKAA-LASCHEGYGVSVIVGVPP 295 (373)
T ss_pred CCCcHHHHHH-HHhhccCCCEEEEEccCC
Confidence 9976555543 444 46899999999763
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically |
| >PRK15059 tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0027 Score=71.60 Aligned_cols=88 Identities=16% Similarity=0.185 Sum_probs=68.2
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCCCcccCcH------HHH
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTGNYHVITH------DHM 884 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG~~~vi~~------~~~ 884 (1027)
+|++||.|.+|..+|+.+...|.+|+++|+++. .......|.. ..+..+++.++|+||.+..+...+.. ..+
T Consensus 2 ~Ig~IGlG~MG~~ma~~L~~~G~~v~v~~~~~~-~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~~~v~~v~~~~~g~~ 80 (292)
T PRK15059 2 KLGFIGLGIMGTPMAINLARAGHQLHVTTIGPV-ADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCT 80 (292)
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEeCCHh-HHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCCcchh
Confidence 689999999999999999999999999999884 3444556775 44677888899999998876532221 124
Q ss_pred hcCCCCeEEEEecCCC
Q psy15208 885 RDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d 900 (1027)
..+++|.++++++..+
T Consensus 81 ~~~~~g~ivvd~sT~~ 96 (292)
T PRK15059 81 KASLKGKTIVDMSSIS 96 (292)
T ss_pred ccCCCCCEEEECCCCC
Confidence 5578899999998764
|
|
| >cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0021 Score=73.63 Aligned_cols=93 Identities=17% Similarity=0.224 Sum_probs=74.0
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HH----HHh--ccCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----ME----YAK--KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~----e~l--~~aDvvi~atG 874 (1027)
-.|++|+|.|.|.+|+.+++.++.+|+ .|++++.++.+...+...|++ +++ .. +.. ...|++++++|
T Consensus 165 ~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g 244 (351)
T cd08285 165 KLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGKGVDAVIIAGG 244 (351)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHhCCCCCcEEEECCC
Confidence 579999999999999999999999999 589999988888778888864 222 11 112 24799999999
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
....+. +.++.++++++++++|..+.
T Consensus 245 ~~~~~~-~~~~~l~~~G~~v~~g~~~~ 270 (351)
T cd08285 245 GQDTFE-QALKVLKPGGTISNVNYYGE 270 (351)
T ss_pred CHHHHH-HHHHHhhcCCEEEEecccCC
Confidence 765444 55899999999999998753
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0033 Score=70.58 Aligned_cols=89 Identities=18% Similarity=0.207 Sum_probs=62.1
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh--------------cC-------------cEEcCHHHHh
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM--------------EG-------------FLVVTMEYAK 863 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~--------------~G-------------~~v~~~~e~l 863 (1027)
++|+|+|+|.+|.++|..++..|.+|+++|+++.+...+.. .| ....+-.+++
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 83 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFARTGYDVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIRTSTSYESL 83 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhCcEeeCCHHHh
Confidence 68999999999999999999999999999999866543211 11 1222222567
Q ss_pred ccCCEEEecCCCcccCcHHHH----hcCCCCeEEEEecCC
Q psy15208 864 KYGDIFVTCTGNYHVITHDHM----RDMKDQAIVCNIGHF 899 (1027)
Q Consensus 864 ~~aDvvi~atG~~~vi~~~~~----~~mk~gailvNvG~~ 899 (1027)
.++|+||+|.....-+..+.| +.+++++++++....
T Consensus 84 ~~aDlVieav~e~~~~k~~~~~~l~~~~~~~~il~S~tsg 123 (291)
T PRK06035 84 SDADFIVEAVPEKLDLKRKVFAELERNVSPETIIASNTSG 123 (291)
T ss_pred CCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEEcCCC
Confidence 889999999865532222322 346788888765443
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.003 Score=70.93 Aligned_cols=80 Identities=21% Similarity=0.217 Sum_probs=59.2
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHh-hc-----CcEEc---CHHHHh
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAA-ME-----GFLVV---TMEYAK 863 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~-~~-----G~~v~---~~~e~l 863 (1027)
.++...+.+. ...+.+++|+|+|+|..|+.++..|...|+ +|+++++++.++.... .. ...+. ++.+.+
T Consensus 112 ~G~~~~l~~~-~~~~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~ 190 (284)
T PRK12549 112 SGFAESFRRG-LPDASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSDLAAAL 190 (284)
T ss_pred HHHHHHHHhh-ccCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhh
Confidence 5667776543 234789999999999999999999999998 7999999987765422 21 12222 234467
Q ss_pred ccCCEEEecCC
Q psy15208 864 KYGDIFVTCTG 874 (1027)
Q Consensus 864 ~~aDvvi~atG 874 (1027)
.++|+||+||.
T Consensus 191 ~~aDiVInaTp 201 (284)
T PRK12549 191 AAADGLVHATP 201 (284)
T ss_pred CCCCEEEECCc
Confidence 78999999974
|
|
| >TIGR01546 GAPDH-II_archae glyceraldehyde-3-phosphate dehydrogenase, type II | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0029 Score=72.25 Aligned_cols=83 Identities=24% Similarity=0.207 Sum_probs=61.6
Q ss_pred EEEEcCChhHHHHHHHHHh-CCCE-EEEEcCCchhHHH-HhhcCcEE------------------c-CHHHHhccCCEEE
Q psy15208 813 AVIIGYGDVGKGSAQAMRA-LSAQ-VWIIEIDPICALQ-AAMEGFLV------------------V-TMEYAKKYGDIFV 870 (1027)
Q Consensus 813 VvViG~G~IG~~vA~~a~~-~Ga~-ViV~d~dp~r~~~-A~~~G~~v------------------~-~~~e~l~~aDvvi 870 (1027)
|+|+|||.||+.+++.+.. -+++ |.|.|.+|.++.. |...|++. . ++++++.++|+|+
T Consensus 1 VaInG~GrIGr~varav~~~~d~elVaVnD~~~~~~a~lA~~lgyds~~~~~~~~~~~~~~~l~v~g~~eeLl~~vDiVv 80 (333)
T TIGR01546 1 VGVNGYGTIGKRVADAVTKQDDMKLVGVTKTSPDFEAYRAKELGIPVYAASEEFIPRFEEAGIEVAGTLEDLLEKVDIVV 80 (333)
T ss_pred CEEECCcHHHHHHHHHHhhCCCcEEEEEecCChHHHHHHHHHhCCCEEeecCCcceEeccCceEecCCHHHHhhcCCEEE
Confidence 6899999999999998765 3566 4467888765433 44445443 1 3677788899999
Q ss_pred ecCCC-cccCcHHHHhcCCCCeEEEE
Q psy15208 871 TCTGN-YHVITHDHMRDMKDQAIVCN 895 (1027)
Q Consensus 871 ~atG~-~~vi~~~~~~~mk~gailvN 895 (1027)
+|||. .+..+.+.+..|+.+++++-
T Consensus 81 e~Tp~~~~~~na~~~~~~GakaVl~~ 106 (333)
T TIGR01546 81 DATPGGIGAKNKPLYEKAGVKAIFQG 106 (333)
T ss_pred ECCCCCCChhhHHHHHhCCcCEEEEC
Confidence 99985 47788888999998887753
|
All of the members of the seed are characterized. See, for instance. This model is very solid, there are no species falling between trusted and noise at this time. The closest relatives scoring in the noise are the class I GAPDH's. |
| >COG0281 SfcA Malic enzyme [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0067 Score=70.09 Aligned_cols=130 Identities=18% Similarity=0.284 Sum_probs=97.5
Q ss_pred CCccceEeecccccccccccchhhhhhHHHHHhh---hcCccccCCEEEEEcCChhHHHHHHHHHhCCC---EEEEEcCC
Q psy15208 769 KLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKR---ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA---QVWIIEID 842 (1027)
Q Consensus 769 ~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r---~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga---~ViV~d~d 842 (1027)
.+.+||| .|..+||+--+..++.. .+|..+...+|++.|+|.-|.+++..+++.|+ +|+++|+.
T Consensus 165 ~~~IPvF----------hDDqqGTaiv~lA~llnalk~~gk~l~d~kiv~~GAGAAgiaia~~l~~~g~~~~~i~~~D~~ 234 (432)
T COG0281 165 RMNIPVF----------HDDQQGTAIVTLAALLNALKLTGKKLKDQKIVINGAGAAGIAIADLLVAAGVKEENIFVVDRK 234 (432)
T ss_pred cCCCCcc----------cccccHHHHHHHHHHHHHHHHhCCCccceEEEEeCCcHHHHHHHHHHHHhCCCcccEEEEecC
Confidence 5788887 57788998877666554 55778999999999999999999999999999 59988764
Q ss_pred c-------------hhHHHHh-hcCcEEcCHHHHhccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhh
Q psy15208 843 P-------------ICALQAA-MEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKL 908 (1027)
Q Consensus 843 p-------------~r~~~A~-~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l 908 (1027)
- .+...|. ..+-... ++++..+|+++-++|. ++++++.++.|.+..++.-..-...|+.-+..
T Consensus 235 G~l~~~r~~~~~~~~k~~~a~~~~~~~~~--~~~~~~adv~iG~S~~-G~~t~e~V~~Ma~~PiIfalaNP~pEi~Pe~a 311 (432)
T COG0281 235 GLLYDGREDLTMNQKKYAKAIEDTGERTL--DLALAGADVLIGVSGV-GAFTEEMVKEMAKHPIIFALANPTPEITPEDA 311 (432)
T ss_pred CcccCCCcccccchHHHHHHHhhhccccc--cccccCCCEEEEcCCC-CCcCHHHHHHhccCCEEeecCCCCccCCHHHH
Confidence 2 1111121 1111111 4577889999999987 89999999999999888776666677776655
Q ss_pred hcc
Q psy15208 909 KKY 911 (1027)
Q Consensus 909 ~~~ 911 (1027)
.++
T Consensus 312 ~~~ 314 (432)
T COG0281 312 KEW 314 (432)
T ss_pred hhc
Confidence 544
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0039 Score=71.24 Aligned_cols=86 Identities=16% Similarity=0.129 Sum_probs=68.1
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc--------C------cE-EcCHHHHhccCCEEEecCCC
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME--------G------FL-VVTMEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~--------G------~~-v~~~~e~l~~aDvvi~atG~ 875 (1027)
.+|+|+|+|.+|..+|..+...|.+|+++++++.+....... | +. ..++++++..+|+|+.++.+
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v~~ 84 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAVPS 84 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEECch
Confidence 479999999999999999999999999999987654433322 3 22 33677788899999999877
Q ss_pred cccCcHHHHhcCCCCeEEEEecC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~ 898 (1027)
..+ .+.++.++++.+++++.-
T Consensus 85 ~~~--~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 85 KAL--RETLAGLPRALGYVSCAK 105 (328)
T ss_pred HHH--HHHHHhcCcCCEEEEEee
Confidence 753 566788999998888755
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.009 Score=61.76 Aligned_cols=88 Identities=16% Similarity=0.184 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCC-c
Q psy15208 53 VVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDK-E 131 (1027)
Q Consensus 53 ~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~-~ 131 (1027)
.|..++..|.. .+.|+.+|++|++.+.....+...+ +....+.+....+..+++++||||||.++..++.+... .
T Consensus 14 ~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~ 89 (212)
T smart00824 14 EYARLAAALRG-RRDVSALPLPGFGPGEPLPASADAL---VEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARG 89 (212)
T ss_pred HHHHHHHhcCC-CccEEEecCCCCCCCCCCCCCHHHH---HHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCC
Confidence 57788888865 6899999999998765443332222 23344444444556689999999999999998887432 1
Q ss_pred CCccEEEEEccCC
Q psy15208 132 ISIKILILISVAV 144 (1027)
Q Consensus 132 ~~V~gLVli~p~~ 144 (1027)
..+.+++++++..
T Consensus 90 ~~~~~l~~~~~~~ 102 (212)
T smart00824 90 IPPAAVVLLDTYP 102 (212)
T ss_pred CCCcEEEEEccCC
Confidence 2578888777544
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0038 Score=71.11 Aligned_cols=91 Identities=15% Similarity=0.080 Sum_probs=71.5
Q ss_pred cccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-cCcE-EcC------HHHHh-----ccCCEEEec
Q psy15208 807 MIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-EGFL-VVT------MEYAK-----KYGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-~G~~-v~~------~~e~l-----~~aDvvi~a 872 (1027)
.-.|++|+|.|. |.+|+.+++.++.+|++|+++..++.+...+.. .|++ +.+ ..+.+ ...|+++++
T Consensus 149 ~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~ 228 (338)
T cd08295 149 PKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDN 228 (338)
T ss_pred CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEEC
Confidence 357999999998 999999999999999999998888877776766 7764 222 22222 247999999
Q ss_pred CCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 873 TGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 873 tG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+|... + .+.++.++++|.++++|..
T Consensus 229 ~g~~~-~-~~~~~~l~~~G~iv~~G~~ 253 (338)
T cd08295 229 VGGKM-L-DAVLLNMNLHGRIAACGMI 253 (338)
T ss_pred CCHHH-H-HHHHHHhccCcEEEEeccc
Confidence 98743 3 4568999999999999864
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0032 Score=76.10 Aligned_cols=91 Identities=18% Similarity=0.245 Sum_probs=65.4
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH-----------hhcC-------------cE-EcCHHHHh
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA-----------AMEG-------------FL-VVTMEYAK 863 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A-----------~~~G-------------~~-v~~~~e~l 863 (1027)
.=++|+|||.|..|.++|+.+...|..|+++|+++.....+ ...| +. ..++ +++
T Consensus 4 ~~~kV~VIGaG~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~-~~l 82 (503)
T TIGR02279 4 NVVTVAVIGAGAMGAGIAQVAASAGHQVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVTDL-HAL 82 (503)
T ss_pred CccEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeCCH-HHh
Confidence 44689999999999999999999999999999998765432 2233 22 2344 456
Q ss_pred ccCCEEEecCCCcccCcHHHH----hcCCCCeEEE-EecCCC
Q psy15208 864 KYGDIFVTCTGNYHVITHDHM----RDMKDQAIVC-NIGHFD 900 (1027)
Q Consensus 864 ~~aDvvi~atG~~~vi~~~~~----~~mk~gailv-NvG~~d 900 (1027)
.++|+||+|.....-+....| ..++++++|+ |++..+
T Consensus 83 ~~aDlVIEav~E~~~vK~~vf~~l~~~~~~~~IlasnTStl~ 124 (503)
T TIGR02279 83 ADAGLVIEAIVENLEVKKALFAQLEELCPADTIIASNTSSLS 124 (503)
T ss_pred CCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCC
Confidence 799999999865432333333 3478888887 776653
|
This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families. |
| >PRK06046 alanine dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0053 Score=70.26 Aligned_cols=97 Identities=24% Similarity=0.247 Sum_probs=72.4
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHHHhh-----cCcE---EcCHHHHhccCCEEEecCCCc-c
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQAAM-----EGFL---VVTMEYAKKYGDIFVTCTGNY-H 877 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~A~~-----~G~~---v~~~~e~l~~aDvvi~atG~~-~ 877 (1027)
.-++++|+|+|..|+..++.+.. .+. +|.++++++.++.+... .|+. +.+.++++. +|+|++||++. .
T Consensus 128 ~~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-aDiVv~aTps~~P 206 (326)
T PRK06046 128 DSKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACD-CDILVTTTPSRKP 206 (326)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhh-CCEEEEecCCCCc
Confidence 35899999999999999988874 566 68889999876654332 2543 335778776 99999999765 4
Q ss_pred cCcHHHHhcCCCCeEEEEecCC---Ccccchhhhh
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHF---DNEIEVEKLK 909 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~---d~eid~~~l~ 909 (1027)
++..+ .+|+|+.+..+|.+ ..|+|.+.+.
T Consensus 207 ~~~~~---~l~~g~hV~~iGs~~p~~~El~~~~~~ 238 (326)
T PRK06046 207 VVKAE---WIKEGTHINAIGADAPGKQELDPEILL 238 (326)
T ss_pred EecHH---HcCCCCEEEecCCCCCccccCCHHHHh
Confidence 56644 57999999999986 3678866444
|
|
| >cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0023 Score=72.78 Aligned_cols=93 Identities=18% Similarity=0.269 Sum_probs=72.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcEEcC-----HHH----Hh--ccCCEEEecCC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFLVVT-----MEY----AK--KYGDIFVTCTG 874 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~v~~-----~~e----~l--~~aDvvi~atG 874 (1027)
...|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|..... ..+ .. ...|++++++|
T Consensus 165 ~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~dvvid~~~ 244 (344)
T cd08284 165 VRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAEPINFEDAEPVERVREATEGRGADVVLEAVG 244 (344)
T ss_pred CccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCeEEecCCcCHHHHHHHHhCCCCCCEEEECCC
Confidence 3579999999999999999999999997 899998777777777777753221 111 12 24799999998
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
....+. +.++.|++++.++.+|..+
T Consensus 245 ~~~~~~-~~~~~l~~~g~~v~~g~~~ 269 (344)
T cd08284 245 GAAALD-LAFDLVRPGGVISSVGVHT 269 (344)
T ss_pred CHHHHH-HHHHhcccCCEEEEECcCC
Confidence 765444 5589999999999999764
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical |
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0036 Score=70.22 Aligned_cols=88 Identities=16% Similarity=0.113 Sum_probs=63.2
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-------------------------cCcE-EcCHHHHhc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-------------------------EGFL-VVTMEYAKK 864 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-------------------------~G~~-v~~~~e~l~ 864 (1027)
++|+|+|.|.+|.++|..++..|.+|+++|+++.....+.. .... ..++++++.
T Consensus 4 ~kIaViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~~ 83 (287)
T PRK08293 4 KNVTVAGAGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAVK 83 (287)
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHhc
Confidence 58999999999999999999999999999999865433221 1222 345778889
Q ss_pred cCCEEEecCCCcc----cCcHHHHhcCCCCeEEE-EecC
Q psy15208 865 YGDIFVTCTGNYH----VITHDHMRDMKDQAIVC-NIGH 898 (1027)
Q Consensus 865 ~aDvvi~atG~~~----vi~~~~~~~mk~gailv-NvG~ 898 (1027)
.+|+||+|....- .+-++.-+.++++++++ |.+.
T Consensus 84 ~aDlVieavpe~~~~k~~~~~~l~~~~~~~~ii~sntSt 122 (287)
T PRK08293 84 DADLVIEAVPEDPEIKGDFYEELAKVAPEKTIFATNSST 122 (287)
T ss_pred CCCEEEEeccCCHHHHHHHHHHHHhhCCCCCEEEECccc
Confidence 9999999987541 11122234578888885 4444
|
|
| >cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0024 Score=74.48 Aligned_cols=93 Identities=20% Similarity=0.243 Sum_probs=70.9
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhc-CcEEcC------HHHHhc------cCCEEEecC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAME-GFLVVT------MEYAKK------YGDIFVTCT 873 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~-G~~v~~------~~e~l~------~aDvvi~at 873 (1027)
..|++|+|.|.|.+|+.+++.++..|+ +|++++.++.+...+... +..+++ ..+.+. ..|++++++
T Consensus 183 ~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~v 262 (386)
T cd08283 183 KPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAV 262 (386)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECC
Confidence 578999999999999999999999998 599999998887777666 544432 112221 479999998
Q ss_pred CCcc--------------------cCcHHHHhcCCCCeEEEEecCCC
Q psy15208 874 GNYH--------------------VITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 874 G~~~--------------------vi~~~~~~~mk~gailvNvG~~d 900 (1027)
|... -.-.+.++.|++++.++++|...
T Consensus 263 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~ 309 (386)
T cd08283 263 GMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYG 309 (386)
T ss_pred CCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCC
Confidence 7531 12345688999999999998753
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T |
| >PRK02102 ornithine carbamoyltransferase; Validated | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.17 Score=58.00 Aligned_cols=121 Identities=18% Similarity=0.081 Sum_probs=81.1
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCC--hhHHHHHHHHHhCCCEEEEEcCCchh
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYG--DVGKGSAQAMRALSAQVWIIEIDPIC 845 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G--~IG~~vA~~a~~~Ga~ViV~d~dp~r 845 (1027)
..+||||.-+. .-+ .-|.+.|. +.+..+ .+.|++|+++|-+ .+.+..+..+..+|++|.++-+....
T Consensus 122 ~~vPVINa~~~-~~H-------PtQaLaDl~Ti~e~~g-~l~g~~va~vGd~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~ 192 (331)
T PRK02102 122 SGVPVWNGLTD-EWH-------PTQMLADFMTMKEHFG-PLKGLKLAYVGDGRNNMANSLMVGGAKLGMDVRICAPKELW 192 (331)
T ss_pred CCCCEEECCCC-CCC-------hHHHHHHHHHHHHHhC-CCCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEECCcccc
Confidence 67999987552 122 23555443 223334 4789999999997 68899999999999999887332211
Q ss_pred H---------HHHhhcCcE---EcCHHHHhccCCEEEecC----C------------CcccCcHHHHh-cCCCCeEEEEe
Q psy15208 846 A---------LQAAMEGFL---VVTMEYAKKYGDIFVTCT----G------------NYHVITHDHMR-DMKDQAIVCNI 896 (1027)
Q Consensus 846 ~---------~~A~~~G~~---v~~~~e~l~~aDvvi~at----G------------~~~vi~~~~~~-~mk~gailvNv 896 (1027)
. ..+...|.. ..+++++++++|||++-+ | ..--++++.++ .+|+++++.-.
T Consensus 193 ~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~~w~~~~~~~~~~~~~~~~~~y~vt~ell~~~~~~d~ivmH~ 272 (331)
T PRK02102 193 PEEELVALAREIAKETGAKITITEDPEEAVKGADVIYTDVWVSMGEEDEWEERIKLLKPYQVNMDLMKATGNPDVIFMHC 272 (331)
T ss_pred cCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcCcccCccccchHHHHHhccCCcCCHHHHhhhcCCCCEEECC
Confidence 1 112334644 357899999999998732 1 12346777777 47899999877
Q ss_pred cCC
Q psy15208 897 GHF 899 (1027)
Q Consensus 897 G~~ 899 (1027)
+..
T Consensus 273 lP~ 275 (331)
T PRK02102 273 LPA 275 (331)
T ss_pred CCC
Confidence 765
|
|
| >PRK06407 ornithine cyclodeaminase; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0061 Score=68.98 Aligned_cols=98 Identities=18% Similarity=0.088 Sum_probs=74.5
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHHH-h----hcCcE---EcCHHHHhccCCEEEecCCCc-c
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQA-A----MEGFL---VVTMEYAKKYGDIFVTCTGNY-H 877 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~A-~----~~G~~---v~~~~e~l~~aDvvi~atG~~-~ 877 (1027)
.-++++|+|+|..|+..++.+.. +.. +|.|+++++.++.+. . ..|.+ +.+.++++.++|||++||+.. .
T Consensus 116 da~~l~iiGaG~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~P 195 (301)
T PRK06407 116 NVENFTIIGSGFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDTP 195 (301)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCc
Confidence 46999999999999988877775 444 799999999776541 1 12543 346899999999999998755 5
Q ss_pred cCcHHHHhcCCCCeEEEEecCCC---cccchhhhh
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFD---NEIEVEKLK 909 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d---~eid~~~l~ 909 (1027)
++..+ .+|+|+-+.-+|.+. .|++.+.+.
T Consensus 196 ~~~~~---~l~pg~hV~aiGs~~p~~~El~~~~l~ 227 (301)
T PRK06407 196 IFNRK---YLGDEYHVNLAGSNYPNRREAEHSVLN 227 (301)
T ss_pred EecHH---HcCCCceEEecCCCCCCcccCCHHHHH
Confidence 66654 578999999999873 688876554
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0036 Score=74.42 Aligned_cols=88 Identities=22% Similarity=0.198 Sum_probs=69.4
Q ss_pred EEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhH-HHHhhcCcEEc-CHHHHhccCCEEEecCCCcc---cCcHHHHh
Q psy15208 812 IAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICA-LQAAMEGFLVV-TMEYAKKYGDIFVTCTGNYH---VITHDHMR 885 (1027)
Q Consensus 812 ~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~-~~A~~~G~~v~-~~~e~l~~aDvvi~atG~~~---vi~~~~~~ 885 (1027)
+|+|+| +|.+|..+|+.++..|.+|+++++++... ..+...|.... +..+++.++|+||.|++... ++ .+...
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~~~~~e~~~~aDvVIlavp~~~~~~vl-~~l~~ 80 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVIISVPINVTEDVI-KEVAP 80 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeeccCHHHHhccCCEEEEecCHHHHHHHH-HHHHh
Confidence 689997 89999999999999999999999998664 34566677644 56788889999999987542 22 23345
Q ss_pred cCCCCeEEEEecCCC
Q psy15208 886 DMKDQAIVCNIGHFD 900 (1027)
Q Consensus 886 ~mk~gailvNvG~~d 900 (1027)
.+++++++++++...
T Consensus 81 ~l~~~~iViDvsSvK 95 (437)
T PRK08655 81 HVKEGSLLMDVTSVK 95 (437)
T ss_pred hCCCCCEEEEccccc
Confidence 678999999999753
|
|
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0037 Score=70.56 Aligned_cols=88 Identities=10% Similarity=0.032 Sum_probs=68.2
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHH---hccCCEEEecCCCc---ccCcHHHH
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYA---KKYGDIFVTCTGNY---HVITHDHM 884 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~---l~~aDvvi~atG~~---~vi~~~~~ 884 (1027)
+|+|||.|.+|..+|+.+...|.+|+++|+++.+.......|... .+.+++ +..+|+|+.++... .++ .+..
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~~~~~v~-~~l~ 80 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHGIVDAVL-EELA 80 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCchHHHHHH-HHHH
Confidence 699999999999999999999999999999998877766666543 344443 45689999887654 333 2345
Q ss_pred hcCCCCeEEEEecCCC
Q psy15208 885 RDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d 900 (1027)
..+++|.++++++-..
T Consensus 81 ~~l~~g~ivid~st~~ 96 (298)
T TIGR00872 81 PTLEKGDIVIDGGNSY 96 (298)
T ss_pred hhCCCCCEEEECCCCC
Confidence 6688999999987753
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PF00208 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; InterPro: IPR006096 Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0052 Score=67.48 Aligned_cols=98 Identities=23% Similarity=0.315 Sum_probs=68.7
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEE--------cCCchhHHH----Hhhc-------------CcEEcCHH-
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWII--------EIDPICALQ----AAME-------------GFLVVTME- 860 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~--------d~dp~r~~~----A~~~-------------G~~v~~~~- 860 (1027)
.+.|++|+|-|+|.+|..+|+.+...|++|+.+ |.+.+...+ .... +.+..+-+
T Consensus 29 ~l~g~~v~IqGfG~VG~~~a~~l~~~Ga~vv~vsD~~G~i~~~~Gld~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 108 (244)
T PF00208_consen 29 SLEGKRVAIQGFGNVGSHAARFLAELGAKVVAVSDSSGAIYDPDGLDVEELLRIKEERGSRVDDYPLESPDGAEYIPNDD 108 (244)
T ss_dssp SSTTCEEEEEESSHHHHHHHHHHHHTTEEEEEEEESSEEEEETTEEHHHHHHHHHHHHSSHSTTGTHTCSSTSEEECHHC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCceEEEcCCCchHHHHHHHHHHhCCcccccccccccceeEecccc
Confidence 489999999999999999999999999997765 555433222 1111 22333443
Q ss_pred HHh-ccCCEEEecCCCcccCcHHHHh-cCCCCeEEEEecCCCcccchh
Q psy15208 861 YAK-KYGDIFVTCTGNYHVITHDHMR-DMKDQAIVCNIGHFDNEIEVE 906 (1027)
Q Consensus 861 e~l-~~aDvvi~atG~~~vi~~~~~~-~mk~gailvNvG~~d~eid~~ 906 (1027)
+.+ ..+||++-|. ..++|+.+... .+++++.+|--|. +..+..+
T Consensus 109 ~il~~~~DiliP~A-~~~~I~~~~~~~~i~~~akiIvegA-N~p~t~~ 154 (244)
T PF00208_consen 109 EILSVDCDILIPCA-LGNVINEDNAPSLIKSGAKIIVEGA-NGPLTPE 154 (244)
T ss_dssp HGGTSSSSEEEEES-SSTSBSCHHHCHCHHTT-SEEEESS-SSSBSHH
T ss_pred ccccccccEEEEcC-CCCeeCHHHHHHHHhccCcEEEeCc-chhccHH
Confidence 555 4799999884 56679999999 8998888876554 3444433
|
They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction. Glutamate dehydrogenases (1.4.1.2 from EC, 1.4.1.3 from EC, and 1.4.1.4 from EC) (GluDH) are enzymes that catalyse the NAD- and/or NADP-dependent reversible deamination of L-glutamate into alpha-ketoglutarate [, ]. GluDH isozymes are generally involved with either ammonia assimilation or glutamate catabolism. Two separate enzymes are present in yeasts: the NADP-dependent enzyme, which catalyses the amination of alpha-ketoglutarate to L-glutamate; and the NAD-dependent enzyme, which catalyses the reverse reaction [] - this form links the L-amino acids with the Krebs cycle, which provides a major pathway for metabolic interconversion of alpha-amino acids and alpha- keto acids []. Leucine dehydrogenase (1.4.1.9 from EC) (LeuDH) is a NAD-dependent enzyme that catalyses the reversible deamination of leucine and several other aliphatic amino acids to their keto analogues []. Each subunit of this octameric enzyme from Bacillus sphaericus contains 364 amino acids and folds into two domains, separated by a deep cleft. The nicotinamide ring of the NAD+ cofactor binds deep in this cleft, which is thought to close during the hydride transfer step of the catalytic cycle. Phenylalanine dehydrogenase (1.4.1.20 from EC) (PheDH) is na NAD-dependent enzyme that catalyses the reversible deamidation of L-phenylalanine into phenyl-pyruvate []. Valine dehydrogenase (1.4.1.8 from EC) (ValDH) is an NADP-dependent enzyme that catalyses the reversible deamidation of L-valine into 3-methyl-2-oxobutanoate []. This entry represents the C-terminal domain of these proteins.; GO: 0016491 oxidoreductase activity, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process; PDB: 1LEH_A 3AOG_D 3AOE_A 2YFQ_B 2YFH_B 1HRD_A 1K89_A 1AUP_A 1BGV_A 1B26_C .... |
| >PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline [] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0034 Score=71.41 Aligned_cols=97 Identities=26% Similarity=0.253 Sum_probs=60.4
Q ss_pred CCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHH---Hhh-cCcE---EcCHHHHhccCCEEEecCCCcc---
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQ---AAM-EGFL---VVTMEYAKKYGDIFVTCTGNYH--- 877 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~---A~~-~G~~---v~~~~e~l~~aDvvi~atG~~~--- 877 (1027)
-++++|+|+|..++..++.+.. ++. +|.|+++++.++.. ... .|+. +.+.+++++++|||++||+...
T Consensus 128 ~~~l~viGaG~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~av~~aDii~taT~s~~~~P 207 (313)
T PF02423_consen 128 ARTLGVIGAGVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEEAVRGADIIVTATPSTTPAP 207 (313)
T ss_dssp --EEEEE--SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHHHHTTSSEEEE----SSEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhhhcccCCEEEEccCCCCCCc
Confidence 4799999999999998887765 666 79999999976543 111 2554 3468999999999999987544
Q ss_pred cCcHHHHhcCCCCeEEEEecCCC---cccchhhhh
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFD---NEIEVEKLK 909 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d---~eid~~~l~ 909 (1027)
++..+ .+++|+.+..+|... .|+|.+.+.
T Consensus 208 ~~~~~---~l~~g~hi~~iGs~~~~~~El~~~~~~ 239 (313)
T PF02423_consen 208 VFDAE---WLKPGTHINAIGSYTPGMRELDDELLK 239 (313)
T ss_dssp SB-GG---GS-TT-EEEE-S-SSTTBESB-HHHHH
T ss_pred cccHH---HcCCCcEEEEecCCCCchhhcCHHHhc
Confidence 66644 689999999999862 477766444
|
The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A. |
| >KOG2565|consensus | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0051 Score=69.54 Aligned_cols=115 Identities=17% Similarity=0.243 Sum_probs=78.4
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhC---------CcEEEEEcCCCCCCCCCCCCCc
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL---------GYISIRMNFRGVGASSGTYDSG 86 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~---------Gy~Vla~DlrGhG~S~g~~~~~ 86 (1027)
+|+.....|+..+.....-+++++|||+ |+.. -+-.++..|.+- -|.|++|.+||+|.|++.-...
T Consensus 135 ~iHFlhvk~p~~k~~k~v~PlLl~HGwP---Gsv~--EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~G 209 (469)
T KOG2565|consen 135 KIHFLHVKPPQKKKKKKVKPLLLLHGWP---GSVR--EFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTG 209 (469)
T ss_pred eEEEEEecCCccccCCcccceEEecCCC---chHH--HHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCC
Confidence 5666665555322222223469999985 3332 244567777653 3799999999999999753332
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEE
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILI 138 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLV 138 (1027)
-+ +..++.++.-|--+.+..++++-|--+|+.++..+|..+|+ .|.|+=
T Consensus 210 Fn-~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPe--nV~GlH 258 (469)
T KOG2565|consen 210 FN-AAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPE--NVLGLH 258 (469)
T ss_pred cc-HHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcch--hhhHhh
Confidence 22 34455566666666677789999999999999999999999 566654
|
|
| >cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.003 Score=71.88 Aligned_cols=92 Identities=18% Similarity=0.200 Sum_probs=71.0
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcC-----HHHH----hc--cCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVT-----MEYA----KK--YGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~----l~--~aDvvi~atG 874 (1027)
..|++|+|.|.|.+|+.+++.++..|++ |++++.++.+...+...|.+ +.+ ..+. .. ..|++++++|
T Consensus 167 ~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~~~~~~~~d~il~~~g 246 (345)
T cd08287 167 RPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRELTGGVGADAVLECVG 246 (345)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHHHhcCCCCCCEEEECCC
Confidence 5799999999999999999999999995 88888887777767777764 222 1121 11 4899999998
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
....+. ..++.+++++.++++|...
T Consensus 247 ~~~~~~-~~~~~l~~~g~~v~~g~~~ 271 (345)
T cd08287 247 TQESME-QAIAIARPGGRVGYVGVPH 271 (345)
T ss_pred CHHHHH-HHHHhhccCCEEEEecccC
Confidence 765444 4588899999999998654
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0045 Score=68.43 Aligned_cols=85 Identities=11% Similarity=0.125 Sum_probs=65.2
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC----EEEEE-cCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCCCcccCcH---H
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSA----QVWII-EIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTGNYHVITH---D 882 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga----~ViV~-d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG~~~vi~~---~ 882 (1027)
+|++||+|.+|..+|+.+...|. +|+++ ++++.+...+...|+.+. +..+++.++|+||.|+.... +.. +
T Consensus 2 kI~~IG~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v~~~~-~~~vl~~ 80 (266)
T PLN02688 2 RVGFIGAGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAVKPQV-VKDVLTE 80 (266)
T ss_pred eEEEECCcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEECcHH-HHHHHHH
Confidence 68999999999999999999887 89999 999988777777888754 56777889999999984332 221 2
Q ss_pred HHhcCCCCeEEEEec
Q psy15208 883 HMRDMKDQAIVCNIG 897 (1027)
Q Consensus 883 ~~~~mk~gailvNvG 897 (1027)
....++++.+++++-
T Consensus 81 l~~~~~~~~~iIs~~ 95 (266)
T PLN02688 81 LRPLLSKDKLLVSVA 95 (266)
T ss_pred HHhhcCCCCEEEEec
Confidence 124467788877663
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.01 Score=67.48 Aligned_cols=129 Identities=21% Similarity=0.290 Sum_probs=84.5
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCc--EEEEEcCCCCCCCCCCC---CCccchHHHHHHHHHHHHHhCCC
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGY--ISIRMNFRGVGASSGTY---DSGNGETDDMEILLRYIQKKYPY 106 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy--~Vla~DlrGhG~S~g~~---~~~~~~~~Dv~avl~~L~~~~~~ 106 (1027)
.+.++||+||+ .-++++..+ ..++...+.|+ ..+.+-+|-.|.--+.. .+......+++.++.+|.+..+.
T Consensus 115 ~k~vlvFvHGf---Nntf~dav~-R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~ 190 (377)
T COG4782 115 AKTVLVFVHGF---NNTFEDAVY-RTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPV 190 (377)
T ss_pred CCeEEEEEccc---CCchhHHHH-HHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCC
Confidence 46789999997 334544333 45555555555 56778888666533211 11223567788999999988777
Q ss_pred CcEEEEEechhHHHHHHHHHhcCC------cCCccEEEEEccCCCc-------CCCCCCCCcEEEEEeCCC
Q psy15208 107 LPIILAGFSFGTFVQAKLQKRLDK------EISIKILILISVAVKK-------WLIPEVPKNTIIIHGELD 164 (1027)
Q Consensus 107 ~pviLVGhSmGG~vAl~~A~~~p~------~~~V~gLVli~p~~~~-------~~l~~i~~PvLiIhG~~D 164 (1027)
..++|++||||.++.+....+.-- ..+++-+|+.+|-... ..+.....|..++...+|
T Consensus 191 ~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DVF~~Q~~~mg~~~~~ft~~~s~dD 261 (377)
T COG4782 191 KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDVFSSQIAAMGKPDPPFTLFVSRDD 261 (377)
T ss_pred ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhhHHHHHHHhcCCCCCeeEEecccc
Confidence 889999999999999887765321 1246778888876531 134555566666665555
|
|
| >COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.005 Score=71.23 Aligned_cols=100 Identities=23% Similarity=0.268 Sum_probs=71.4
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCch------------------hH-HHHhhcCcEEcCHHHHhc-
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPI------------------CA-LQAAMEGFLVVTMEYAKK- 864 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~------------------r~-~~A~~~G~~v~~~~e~l~- 864 (1027)
+..+.|++|.|-|+|++|+..|+.+...||+|++++.+.- +. ..+...|.++++-++.+.
T Consensus 202 g~~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g~i~~~~Gld~~~l~~~~~~~~~v~~~~ga~~i~~~e~~~~ 281 (411)
T COG0334 202 GDDLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKGGIYDEDGLDVEALLELKERRGSVAEYAGAEYITNEELLEV 281 (411)
T ss_pred CCCcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCCceecCCCCCHHHHHHHhhhhhhHHhhcCceEccccccccc
Confidence 4458999999999999999999999999999998765443 11 123334566666666664
Q ss_pred cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhh
Q psy15208 865 YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKL 908 (1027)
Q Consensus 865 ~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l 908 (1027)
.|||++-|. ..+.|+.+...++|...++ +..+.....+..
T Consensus 282 ~cDIl~PcA-~~n~I~~~na~~l~ak~V~---EgAN~P~t~eA~ 321 (411)
T COG0334 282 DCDILIPCA-LENVITEDNADQLKAKIVV---EGANGPTTPEAD 321 (411)
T ss_pred cCcEEcccc-cccccchhhHHHhhhcEEE---eccCCCCCHHHH
Confidence 699998764 5567899889999888332 444444444433
|
|
| >cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0039 Score=71.35 Aligned_cols=93 Identities=16% Similarity=0.232 Sum_probs=71.7
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcC-----HHHH----hc--cCCEEEecC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVT-----MEYA----KK--YGDIFVTCT 873 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~----l~--~aDvvi~at 873 (1027)
...|++|+|.|.|.+|+.+++.++.+|++ |++++.++.+...+...|++ +.+ ..+. .. ..|++++++
T Consensus 172 ~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vdvvld~~ 251 (350)
T cd08256 172 IKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEKIKELTGGYGCDIYIEAT 251 (350)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCCCEEEECC
Confidence 35799999999999999999999999985 77788888777777777764 322 1111 11 379999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
|....+. +.++.+++++.++++|.+.
T Consensus 252 g~~~~~~-~~~~~l~~~G~~v~~g~~~ 277 (350)
T cd08256 252 GHPSAVE-QGLNMIRKLGRFVEFSVFG 277 (350)
T ss_pred CChHHHH-HHHHHhhcCCEEEEEccCC
Confidence 8654444 4589999999999998764
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, |
| >PRK11891 aspartate carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.25 Score=58.44 Aligned_cols=131 Identities=11% Similarity=0.132 Sum_probs=81.6
Q ss_pred HHHHHHHcCCCccceEeecccccccccccchhhhhhHHHH--HhhhcC---ccccCCEEEEEcCC---hhHHHHHHHHHh
Q psy15208 760 RLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATD---VMIAGKIAVIIGYG---DVGKGSAQAMRA 831 (1027)
Q Consensus 760 rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~---~~l~Gk~VvViG~G---~IG~~vA~~a~~ 831 (1027)
.++.|++ ...+||||.=++..-|. -|.+.|. +.+..+ -.+.|++|+++|-+ ++.+..+..+..
T Consensus 195 ~~~e~A~--~s~vPVINAgdg~~~HP-------tQaLaDl~Ti~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~ 265 (429)
T PRK11891 195 SVAEFAR--ATNLPVINGGDGPGEHP-------SQALLDLYTIQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLAL 265 (429)
T ss_pred HHHHHHH--hCCCCEEECCCCCCCCc-------HHHHHHHHHHHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHH
Confidence 3444444 36899998765433332 2444332 222212 13789999999995 788888888777
Q ss_pred C-CCEEEEEcCCchh-----HHHHhhcCcE---EcCHHHHhccCCEEEecCCC--------------cccCcHHHHhc-C
Q psy15208 832 L-SAQVWIIEIDPIC-----ALQAAMEGFL---VVTMEYAKKYGDIFVTCTGN--------------YHVITHDHMRD-M 887 (1027)
Q Consensus 832 ~-Ga~ViV~d~dp~r-----~~~A~~~G~~---v~~~~e~l~~aDvvi~atG~--------------~~vi~~~~~~~-m 887 (1027)
+ |++|.++-+.... ..++...|.. +.+++++++++|||++..+- .-.++.+.++. .
T Consensus 266 ~~G~~v~l~~P~~~~~~~~~~~~~~~~G~~v~~~~d~~eav~~ADVVYt~~~q~er~~~~~~~~~~~~y~vt~ell~~~a 345 (429)
T PRK11891 266 YRGLKFTLVSPPTLEMPAYIVEQISRNGHVIEQTDDLAAGLRGADVVYATRIQKERFADESFEGYTPDFQINQALVDAVC 345 (429)
T ss_pred hcCCEEEEECCCccccCHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEEcCchhhcccCHHHHHhccCCcCCHHHHhCcc
Confidence 6 9999887432221 1223344643 46789999999999875431 12456666666 6
Q ss_pred CCCeEEEEecCC
Q psy15208 888 KDQAIVCNIGHF 899 (1027)
Q Consensus 888 k~gailvNvG~~ 899 (1027)
|+++++...+.-
T Consensus 346 k~dai~MHcLPr 357 (429)
T PRK11891 346 KPDTLIMHPLPR 357 (429)
T ss_pred CCCcEEECCCCC
Confidence 777777766553
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.005 Score=66.65 Aligned_cols=93 Identities=19% Similarity=0.232 Sum_probs=72.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHH-----hccCCEEEecCCC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYA-----KKYGDIFVTCTGN 875 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~-----l~~aDvvi~atG~ 875 (1027)
...|++|+|.|.|.+|+.+++.++..|++|++++.++.+...+...|.+ +.+ ..+. -...|++++++|.
T Consensus 132 ~~~~~~vli~g~~~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~ 211 (271)
T cd05188 132 LKPGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGG 211 (271)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCC
Confidence 3579999999999999999999999999999999988777666666653 221 1111 1358999999987
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
... ....++.|++++.++++|..+
T Consensus 212 ~~~-~~~~~~~l~~~G~~v~~~~~~ 235 (271)
T cd05188 212 PET-LAQALRLLRPGGRIVVVGGTS 235 (271)
T ss_pred HHH-HHHHHHhcccCCEEEEEccCC
Confidence 433 334588999999999999764
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.14 Score=58.28 Aligned_cols=129 Identities=21% Similarity=0.245 Sum_probs=85.9
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCC---hhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYG---DVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G---~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
..+||||.=+...-|. -|.+.|- +.+..| .+.|++|+++|-+ ++.+..+..++.+|++|.++-+...
T Consensus 122 ~~vPVINa~~g~~~HP-------tQ~LaDl~Ti~e~~G-~l~g~kv~~vGD~~~~~v~~Sl~~~~~~~g~~~~~~~P~~~ 193 (305)
T PRK00856 122 SDVPVINAGDGSHQHP-------TQALLDLLTIREEFG-RLEGLKVAIVGDIKHSRVARSNIQALTRLGAEVRLIAPPTL 193 (305)
T ss_pred CCCCEEECCCCCCCCc-------HHHHHHHHHHHHHhC-CCCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEECCccc
Confidence 6799998754322221 2333332 222334 4789999999984 7999999999999999999844332
Q ss_pred hHHHHhhcCcE-EcCHHHHhccCCEEEecCCC-----------------cccCcHHHHhcCCCCeEEEEecCC--Ccccc
Q psy15208 845 CALQAAMEGFL-VVTMEYAKKYGDIFVTCTGN-----------------YHVITHDHMRDMKDQAIVCNIGHF--DNEIE 904 (1027)
Q Consensus 845 r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG~-----------------~~vi~~~~~~~mk~gailvNvG~~--d~eid 904 (1027)
.... ...+. ..+++++++++|||++.... .-.++++.++.+|+++++.-+... ..|++
T Consensus 194 ~~~~--~~~~~~~~d~~ea~~~aDvvyt~~~q~e~~~~~~~~~~~~~~~~y~v~~~ll~~a~~~~~~mHcLPa~Rg~Ev~ 271 (305)
T PRK00856 194 LPEG--MPEYGVHTDLDEVIEDADVVMMLRVQKERMDGGLLPSYEEYKRSYGLTAERLALAKPDAIVMHPGPVNRGVEIA 271 (305)
T ss_pred Cccc--ccceEEECCHHHHhCCCCEEEECCcccccccccchHHHHHHhccCccCHHHHhhcCCCCEEECCCCCCCCCccC
Confidence 1111 11123 45789999999999875421 235777878888999999887773 55666
Q ss_pred hhhh
Q psy15208 905 VEKL 908 (1027)
Q Consensus 905 ~~~l 908 (1027)
-+.+
T Consensus 272 ~~V~ 275 (305)
T PRK00856 272 SDVA 275 (305)
T ss_pred HHHh
Confidence 5533
|
|
| >cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0032 Score=72.82 Aligned_cols=92 Identities=14% Similarity=0.148 Sum_probs=71.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcCH-------HHHh-----ccCCEEEec
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVTM-------EYAK-----KYGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~~-------~e~l-----~~aDvvi~a 872 (1027)
...|++|+|.|.|.+|..+++.++.+|++ |++++.++.+...+...|++ +++. .+.+ ...|+++++
T Consensus 181 ~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~ 260 (365)
T cd05279 181 VTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEV 260 (365)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccccchHHHHHHHHhCCCCcEEEEC
Confidence 35799999999999999999999999995 78888788777777777763 3221 1111 137999999
Q ss_pred CCCcccCcHHHHhcCC-CCeEEEEecCC
Q psy15208 873 TGNYHVITHDHMRDMK-DQAIVCNIGHF 899 (1027)
Q Consensus 873 tG~~~vi~~~~~~~mk-~gailvNvG~~ 899 (1027)
+|....+. ..++.++ ++++++.+|..
T Consensus 261 ~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 287 (365)
T cd05279 261 IGSADTLK-QALDATRLGGGTSVVVGVP 287 (365)
T ss_pred CCCHHHHH-HHHHHhccCCCEEEEEecC
Confidence 98755445 4588899 99999999864
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall |
| >cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0048 Score=67.89 Aligned_cols=93 Identities=22% Similarity=0.255 Sum_probs=72.9
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcC-cE-EcCHHHH---hccCCEEEecCCCcccCc
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEG-FL-VVTMEYA---KKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G-~~-v~~~~e~---l~~aDvvi~atG~~~vi~ 880 (1027)
...|++++|.|.|.+|..+++.++.+|++ |++++.++.+...+...| .+ +....+. -...|++++++|....+
T Consensus 95 ~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~- 173 (277)
T cd08255 95 PRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTADEIGGRGADVVIEASGSPSAL- 173 (277)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccchhhhcCCCCCEEEEccCChHHH-
Confidence 35799999999999999999999999998 999998888877777777 32 2222211 13589999998866533
Q ss_pred HHHHhcCCCCeEEEEecCCC
Q psy15208 881 HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d 900 (1027)
...++.|++++.++++|..+
T Consensus 174 ~~~~~~l~~~g~~~~~g~~~ 193 (277)
T cd08255 174 ETALRLLRDRGRVVLVGWYG 193 (277)
T ss_pred HHHHHHhcCCcEEEEEeccC
Confidence 45689999999999998764
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD |
| >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0052 Score=68.72 Aligned_cols=88 Identities=19% Similarity=0.191 Sum_probs=61.3
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH-----------HhhcC-------------cEEcCHHHHhccC
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ-----------AAMEG-------------FLVVTMEYAKKYG 866 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-----------A~~~G-------------~~v~~~~e~l~~a 866 (1027)
++|+|+|.|.+|..+|..++..|.+|+++|+++.+... ....| ..+.+-.+.+..+
T Consensus 4 ~kI~VIG~G~mG~~ia~~la~~g~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~a 83 (282)
T PRK05808 4 QKIGVIGAGTMGNGIAQVCAVAGYDVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITGTTDLDDLKDA 83 (282)
T ss_pred cEEEEEccCHHHHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHHHhccC
Confidence 57999999999999999999999999999999976632 22233 2323223457889
Q ss_pred CEEEecCCCcccCcH----HHHhcCCCCeEE-EEecC
Q psy15208 867 DIFVTCTGNYHVITH----DHMRDMKDQAIV-CNIGH 898 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~----~~~~~mk~gail-vNvG~ 898 (1027)
|+||.|......+.. +.-+.+++++++ .|++.
T Consensus 84 DlVi~av~e~~~~k~~~~~~l~~~~~~~~il~s~ts~ 120 (282)
T PRK05808 84 DLVIEAATENMDLKKKIFAQLDEIAKPEAILATNTSS 120 (282)
T ss_pred CeeeecccccHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 999999853211222 223457888888 44544
|
|
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0034 Score=70.14 Aligned_cols=93 Identities=23% Similarity=0.296 Sum_probs=67.7
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchh--HHHHhhcCcE--E-cC-HHHHhccCCEEEecCCCc---ccCc
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPIC--ALQAAMEGFL--V-VT-MEYAKKYGDIFVTCTGNY---HVIT 880 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r--~~~A~~~G~~--v-~~-~~e~l~~aDvvi~atG~~---~vi~ 880 (1027)
-++|+|+|+|-||..+|+.++..|-.|.+++.|... ...+...|.. . .+ ..+++..+|+||-|++-. .++.
T Consensus 3 ~~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~~~~~~l~ 82 (279)
T COG0287 3 SMKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIEATEEVLK 82 (279)
T ss_pred CcEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHHHHHHHHH
Confidence 478999999999999999999999988777666644 3445545552 1 22 256677899999988644 2222
Q ss_pred HHHHhcCCCCeEEEEecCCCccc
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEI 903 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~ei 903 (1027)
+....+|+|++|..+|.....+
T Consensus 83 -~l~~~l~~g~iv~Dv~S~K~~v 104 (279)
T COG0287 83 -ELAPHLKKGAIVTDVGSVKSSV 104 (279)
T ss_pred -HhcccCCCCCEEEecccccHHH
Confidence 2233689999999999986543
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0051 Score=58.96 Aligned_cols=83 Identities=25% Similarity=0.358 Sum_probs=59.2
Q ss_pred EEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcC--------HHHH-hccCCEEEecCCCcc--cCcH
Q psy15208 813 AVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT--------MEYA-KKYGDIFVTCTGNYH--VITH 881 (1027)
Q Consensus 813 VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~--------~~e~-l~~aDvvi~atG~~~--vi~~ 881 (1027)
|+|+|+|.+|+.+++.|+..+.+|+++|.|+.+..++...|+.+.. ++++ +.++|.++.++++.. +...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~~~ 80 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTDDDEENLLIA 80 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccCCHHHHHHHH
Confidence 6899999999999999999666999999999998889999987542 1221 456898888887652 2222
Q ss_pred HHHhcCCCCeEEEE
Q psy15208 882 DHMRDMKDQAIVCN 895 (1027)
Q Consensus 882 ~~~~~mk~gailvN 895 (1027)
..++.+-+...++-
T Consensus 81 ~~~r~~~~~~~ii~ 94 (116)
T PF02254_consen 81 LLARELNPDIRIIA 94 (116)
T ss_dssp HHHHHHTTTSEEEE
T ss_pred HHHHHHCCCCeEEE
Confidence 33444445555543
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0034 Score=71.47 Aligned_cols=89 Identities=19% Similarity=0.145 Sum_probs=67.8
Q ss_pred ccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-C-----HHH--Hh--ccCCEEEecCCCc
Q psy15208 808 IAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-T-----MEY--AK--KYGDIFVTCTGNY 876 (1027)
Q Consensus 808 l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~-----~~e--~l--~~aDvvi~atG~~ 876 (1027)
..|++|+|.|. |.+|+.+++.++.+|++|+++..+. +...+...|++.. + ..+ .. ...|+++++.|..
T Consensus 176 ~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 254 (350)
T cd08274 176 GAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRALGADTVILRDAPLLADAKALGGEPVDVVADVVGGP 254 (350)
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHhcCCeEEEeCCCccHHHHHhhCCCCCcEEEecCCHH
Confidence 57999999999 9999999999999999988876554 5666666776422 1 111 11 2489999999875
Q ss_pred ccCcHHHHhcCCCCeEEEEecCC
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
. ....++.|+.++.++++|..
T Consensus 255 ~--~~~~~~~l~~~G~~v~~g~~ 275 (350)
T cd08274 255 L--FPDLLRLLRPGGRYVTAGAI 275 (350)
T ss_pred H--HHHHHHHhccCCEEEEeccc
Confidence 3 34568999999999999854
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK01713 ornithine carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.2 Score=57.64 Aligned_cols=129 Identities=16% Similarity=0.060 Sum_probs=83.8
Q ss_pred HHHHHHcCCCccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCC--hhHHHHHHHHHhCCCEE
Q psy15208 761 LRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYG--DVGKGSAQAMRALSAQV 836 (1027)
Q Consensus 761 l~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G--~IG~~vA~~a~~~Ga~V 836 (1027)
++.|++ ...+||||..+ ..-| .-|.+.|- +.+..+..+.|++|+++|-+ .+.+..+..+..+|++|
T Consensus 115 ~~~~a~--~~~vPVINa~~-~~~H-------PtQaL~Dl~Ti~e~~g~~l~gl~ia~vGD~~~~v~~Sl~~~~~~~g~~v 184 (334)
T PRK01713 115 VNELAE--YAGVPVFNGLT-DEFH-------PTQMLADVLTMIENCDKPLSEISYVYIGDARNNMGNSLLLIGAKLGMDV 184 (334)
T ss_pred HHHHHH--hCCCCEEECCC-CCCC-------hHHHHHHHHHHHHHcCCCcCCcEEEEECCCccCHHHHHHHHHHHcCCEE
Confidence 344443 36789999844 2222 23555543 33333424789999999987 47888899999999999
Q ss_pred EEEcCCchhH---------HHHhhcCcE---EcCHHHHhccCCEEEecC----CC-------------cccCcHHHHhcC
Q psy15208 837 WIIEIDPICA---------LQAAMEGFL---VVTMEYAKKYGDIFVTCT----GN-------------YHVITHDHMRDM 887 (1027)
Q Consensus 837 iV~d~dp~r~---------~~A~~~G~~---v~~~~e~l~~aDvvi~at----G~-------------~~vi~~~~~~~m 887 (1027)
.++-+..... ..+...|.. ..+++++++++|||.+.+ |. .-.++.+.++..
T Consensus 185 ~~~~P~~~~p~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvVyt~~w~sm~~~~~~~~~~~~~~~~y~v~~ell~~a 264 (334)
T PRK01713 185 RICAPKALLPEASLVEMCEKFAKESGARITVTDDIDKAVKGVDFVHTDVWVSMGEPLETWGERIKLLMPYQVTPELMKRT 264 (334)
T ss_pred EEECCchhcCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcceeecccchhhHHHHHHhccCCcCCHHHHhcc
Confidence 9884322110 113334643 457999999999998732 21 123676777776
Q ss_pred -CCCeEEEEecCC
Q psy15208 888 -KDQAIVCNIGHF 899 (1027)
Q Consensus 888 -k~gailvNvG~~ 899 (1027)
|+++++...+..
T Consensus 265 ~k~~aivmH~lP~ 277 (334)
T PRK01713 265 GNPKVKFMHCLPA 277 (334)
T ss_pred CCCCCEEECCCCC
Confidence 789999887775
|
|
| >PRK03515 ornithine carbamoyltransferase subunit I; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.23 Score=57.14 Aligned_cols=122 Identities=13% Similarity=0.021 Sum_probs=78.7
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcC-ccccCCEEEEEcCC--hhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATD-VMIAGKIAVIIGYG--DVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~-~~l~Gk~VvViG~G--~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
..+||||.-+. .-| .-|.+.|- +.+.-+ -.+.|.+|+++|-+ ++.+..+..++.+|++|.++-+...
T Consensus 121 ~~vPVINa~~~-~~H-------PtQaLaDl~Ti~e~~g~~~l~g~~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~ 192 (336)
T PRK03515 121 AGVPVWNGLTN-EFH-------PTQLLADLLTMQEHLPGKAFNEMTLAYAGDARNNMGNSLLEAAALTGLDLRLVAPKAC 192 (336)
T ss_pred CCCCEEECCCC-CCC-------hHHHHHHHHHHHHHhCCCCcCCCEEEEeCCCcCcHHHHHHHHHHHcCCEEEEECCchh
Confidence 67999986432 111 23555443 222222 24789999999987 5899999999999999998843221
Q ss_pred h---H------HHHhhcCcE---EcCHHHHhccCCEEEecC----CC-------------cccCcHHHHhcC-CCCeEEE
Q psy15208 845 C---A------LQAAMEGFL---VVTMEYAKKYGDIFVTCT----GN-------------YHVITHDHMRDM-KDQAIVC 894 (1027)
Q Consensus 845 r---~------~~A~~~G~~---v~~~~e~l~~aDvvi~at----G~-------------~~vi~~~~~~~m-k~gailv 894 (1027)
. . ..+...|.. ..+++++++++|||.+.+ |. .--++.+.++.. |+++++.
T Consensus 193 ~~~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDvvytd~W~sm~~~~~~~~er~~~~~~y~v~~~lm~~a~k~~~ivm 272 (336)
T PRK03515 193 WPEAALVTECRALAQKNGGNITLTEDIAEGVKGADFIYTDVWVSMGEPKEVWAERIALLRPYQVNSKMMQLTGNPQVKFL 272 (336)
T ss_pred cCcHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEecCcccCcchhHHHHHHHHhccCCccCHHHHhcccCCCCEEE
Confidence 1 0 113334643 357999999999998742 11 123566667764 7888887
Q ss_pred EecCC
Q psy15208 895 NIGHF 899 (1027)
Q Consensus 895 NvG~~ 899 (1027)
.++..
T Consensus 273 HcLP~ 277 (336)
T PRK03515 273 HCLPA 277 (336)
T ss_pred CCCCC
Confidence 77664
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.006 Score=68.69 Aligned_cols=90 Identities=22% Similarity=0.144 Sum_probs=71.1
Q ss_pred ccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh-----ccCCEEEecCCC
Q psy15208 808 IAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK-----KYGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l-----~~aDvvi~atG~ 875 (1027)
..|++|+|.| .|.+|..+++.++.+|++|+++..++.+...+...|++ +.+ ..+.+ ...|++++++|.
T Consensus 142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~ 221 (329)
T cd08294 142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGG 221 (329)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCH
Confidence 5799999999 59999999999999999999998888777777778864 222 22222 237999999987
Q ss_pred cccCcHHHHhcCCCCeEEEEecCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.. + ...++.++++|.++++|..
T Consensus 222 ~~-~-~~~~~~l~~~G~iv~~g~~ 243 (329)
T cd08294 222 EF-S-STVLSHMNDFGRVAVCGSI 243 (329)
T ss_pred HH-H-HHHHHhhccCCEEEEEcch
Confidence 43 3 4568999999999999864
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK05562 precorrin-2 dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0049 Score=66.59 Aligned_cols=92 Identities=10% Similarity=0.032 Sum_probs=63.9
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHH--HHhhcCcEEcC---HHHHhccCCEEEecCCCcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICAL--QAAMEGFLVVT---MEYAKKYGDIFVTCTGNYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~--~A~~~G~~v~~---~~e~l~~aDvvi~atG~~~vi 879 (1027)
.+.+.|++|+|+|.|.++..=++.|...||+|+|+-.+..... .+....+++.. -.+.+..+++||.||+.+. +
T Consensus 20 ~l~~~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaATdD~~-v 98 (223)
T PRK05562 20 SLLSNKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIATDDEK-L 98 (223)
T ss_pred EEECCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCcEEEECCCCHH-H
Confidence 3456799999999999999988999999999999943322222 22222333322 2344678999999998775 6
Q ss_pred cHHHHhcCCCCeEEEEec
Q psy15208 880 THDHMRDMKDQAIVCNIG 897 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG 897 (1027)
+....+..+...+++|+.
T Consensus 99 N~~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 99 NNKIRKHCDRLYKLYIDC 116 (223)
T ss_pred HHHHHHHHHHcCCeEEEc
Confidence 776556666656777764
|
|
| >PLN02342 ornithine carbamoyltransferase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.24 Score=57.20 Aligned_cols=130 Identities=17% Similarity=0.059 Sum_probs=88.3
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchh-
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPIC- 845 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r- 845 (1027)
..+||||.-+. .-| .-|.+.|- +.+..| .+.|.+|+++|-+. +-+..+..+..+|++|.++-+....
T Consensus 161 ~~vPVINA~~~-~~H-------PtQaLaDl~Ti~e~~G-~l~glkva~vGD~~nva~Sli~~~~~~G~~v~~~~P~~~~~ 231 (348)
T PLN02342 161 SSVPVINGLTD-YNH-------PCQIMADALTIIEHIG-RLEGTKVVYVGDGNNIVHSWLLLAAVLPFHFVCACPKGYEP 231 (348)
T ss_pred CCCCEEECCCC-CCC-------hHHHHHHHHHHHHHhC-CcCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCccccc
Confidence 67999998553 112 23555543 333334 48999999999865 8888889999999999887332211
Q ss_pred ----HHHHhhcC---cE-EcCHHHHhccCCEEEecC----CC------------cccCcHHHHhcCCCCeEEEEecCC--
Q psy15208 846 ----ALQAAMEG---FL-VVTMEYAKKYGDIFVTCT----GN------------YHVITHDHMRDMKDQAIVCNIGHF-- 899 (1027)
Q Consensus 846 ----~~~A~~~G---~~-v~~~~e~l~~aDvvi~at----G~------------~~vi~~~~~~~mk~gailvNvG~~-- 899 (1027)
...+...| +. ..+++++++++|||++.+ +. .-.++.+.++.+|+++++...+..
T Consensus 232 ~~~~~~~a~~~g~~~~~~~~d~~eav~~aDVvy~~~W~s~~~~e~~~~~~~~~~~y~vt~ell~~ak~~aivMHpLP~~r 311 (348)
T PLN02342 232 DAKTVEKARAAGISKIEITNDPAEAVKGADVVYTDVWASMGQKEEAEKRKKAFQGFQVNEALMKLAGPQAYFMHCLPAER 311 (348)
T ss_pred CHHHHHHHHHhCCCcEEEEcCHHHHhCCCCEEEECCccccccchhhHHHHHhccCCccCHHHHhccCCCcEEeCCCCcCC
Confidence 11233333 34 457899999999998753 21 235788888999999999888876
Q ss_pred Ccccchhhh
Q psy15208 900 DNEIEVEKL 908 (1027)
Q Consensus 900 d~eid~~~l 908 (1027)
+.||+-+.+
T Consensus 312 g~EIs~eV~ 320 (348)
T PLN02342 312 GVEVTDGVM 320 (348)
T ss_pred CceecHHHh
Confidence 347775533
|
|
| >cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0073 Score=68.80 Aligned_cols=93 Identities=18% Similarity=0.174 Sum_probs=73.3
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHH------HHhccCCEEEecCCCcccCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTME------YAKKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~------e~l~~aDvvi~atG~~~vi~ 880 (1027)
..|.+|+|.|.|.+|+.+++.++.+|++|++++.++.+...+...|++ +.+.. ..-...|++++++|... ..
T Consensus 168 ~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~d~v~~~~g~~~-~~ 246 (337)
T cd05283 168 GPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGSLDLIIDTVSASH-DL 246 (337)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCCceEEEECCCCcc-hH
Confidence 578999999999999999999999999999998888777777777764 32211 11235799999998764 34
Q ss_pred HHHHhcCCCCeEEEEecCCCc
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~ 901 (1027)
.+.++.+++++.++++|..+.
T Consensus 247 ~~~~~~l~~~G~~v~~g~~~~ 267 (337)
T cd05283 247 DPYLSLLKPGGTLVLVGAPEE 267 (337)
T ss_pred HHHHHHhcCCCEEEEEeccCC
Confidence 456899999999999997643
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic |
| >COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0043 Score=66.09 Aligned_cols=88 Identities=20% Similarity=0.166 Sum_probs=66.9
Q ss_pred EEEEEcCChhHHHHHHHHHhC--CC-EEEEEcCCchhHHHH-hhcC-cEEcCHHHHhccCCEEEecCCCcccCcHHHHhc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRAL--SA-QVWIIEIDPICALQA-AMEG-FLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRD 886 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~--Ga-~ViV~d~dp~r~~~A-~~~G-~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~ 886 (1027)
+|+++|||.||+.+....+.- .. .|.|+|+++.++..+ .+.+ -.+.++++.+.+.|++++|.+... +..-..+.
T Consensus 2 ~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~s~ide~~~~~DlvVEaAS~~A-v~e~~~~~ 80 (255)
T COG1712 2 KVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCVSDIDELIAEVDLVVEAASPEA-VREYVPKI 80 (255)
T ss_pred eEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCccccHHHHhhccceeeeeCCHHH-HHHHhHHH
Confidence 689999999999999999863 45 489999999776642 2333 346789999999999999987654 44444566
Q ss_pred CCC--CeEEEEecCCC
Q psy15208 887 MKD--QAIVCNIGHFD 900 (1027)
Q Consensus 887 mk~--gailvNvG~~d 900 (1027)
||. ..+++.+|-+.
T Consensus 81 L~~g~d~iV~SVGALa 96 (255)
T COG1712 81 LKAGIDVIVMSVGALA 96 (255)
T ss_pred HhcCCCEEEEechhcc
Confidence 766 47788888874
|
|
| >PRK04284 ornithine carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.27 Score=56.53 Aligned_cols=128 Identities=16% Similarity=0.066 Sum_probs=83.4
Q ss_pred HHHHHHcCCCccceEeecccccccccccchhhhhhHHHH--Hhhh-cCccccCCEEEEEcCC--hhHHHHHHHHHhCCCE
Q psy15208 761 LRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRA-TDVMIAGKIAVIIGYG--DVGKGSAQAMRALSAQ 835 (1027)
Q Consensus 761 l~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~-t~~~l~Gk~VvViG~G--~IG~~vA~~a~~~Ga~ 835 (1027)
++.+++ ...+||||..+ ..-| .-|.+.|- +.+. .+ .+.|++|+++|-+ ++.+..+..+..+|++
T Consensus 114 ~~~~a~--~s~vPVINa~~-~~~H-------PtQaL~Dl~Ti~e~~~g-~l~g~kia~vGD~~~~v~~Sl~~~~~~~g~~ 182 (332)
T PRK04284 114 VETLAE--YSGVPVWNGLT-DEDH-------PTQVLADFLTAKEHLKK-PYKDIKFTYVGDGRNNVANALMQGAAIMGMD 182 (332)
T ss_pred HHHHHH--hCCCCEEECCC-CCCC-------hHHHHHHHHHHHHHhcC-CcCCcEEEEecCCCcchHHHHHHHHHHcCCE
Confidence 344443 36799998533 1111 23555443 3333 24 4789999999986 6889999999999999
Q ss_pred EEEEcCC---chh--H----HHHhhcCcE---EcCHHHHhccCCEEEecC----C-------------CcccCcHHHHhc
Q psy15208 836 VWIIEID---PIC--A----LQAAMEGFL---VVTMEYAKKYGDIFVTCT----G-------------NYHVITHDHMRD 886 (1027)
Q Consensus 836 ViV~d~d---p~r--~----~~A~~~G~~---v~~~~e~l~~aDvvi~at----G-------------~~~vi~~~~~~~ 886 (1027)
|.++-+. |.. . ..+...|.. ..+++++++++|+|.+.+ | ..--++.+.++.
T Consensus 183 v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy~~~w~~~~~~~~~~~~~~~~~~~y~v~~e~l~~ 262 (332)
T PRK04284 183 FHLVCPKELNPDDELLNKCKEIAAETGGKITITDDIDEGVKGSDVIYTDVWVSMGEPDEVWEERIKLLKPYQVNKEMMKK 262 (332)
T ss_pred EEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEECCcccCccchhhHHHHHHhccCCcCCHHHHhh
Confidence 9987332 111 1 113345633 457999999999998742 1 123467777888
Q ss_pred CC-CCeEEEEecCC
Q psy15208 887 MK-DQAIVCNIGHF 899 (1027)
Q Consensus 887 mk-~gailvNvG~~ 899 (1027)
+| +++++...+..
T Consensus 263 a~~~~~ivmHplP~ 276 (332)
T PRK04284 263 TGNPNAIFEHCLPS 276 (332)
T ss_pred cCCCCcEEECCCCC
Confidence 86 58998888774
|
|
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0054 Score=72.41 Aligned_cols=89 Identities=20% Similarity=0.216 Sum_probs=66.5
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-------------------cC-cEE-cCHHHHhccCCEEE
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-------------------EG-FLV-VTMEYAKKYGDIFV 870 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-------------------~G-~~v-~~~~e~l~~aDvvi 870 (1027)
+|+|+|.|.+|..+|..++..|.+|+++|+++.+...... .| +.. .+..+++.++|+||
T Consensus 2 kI~vIGlG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~advvi 81 (411)
T TIGR03026 2 KIAVIGLGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADVII 81 (411)
T ss_pred EEEEECCCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCEEE
Confidence 6999999999999999999999999999999866543221 24 332 35677889999999
Q ss_pred ecCCCcc----------cCc--HHHHhcCCCCeEEEEecCCC
Q psy15208 871 TCTGNYH----------VIT--HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 871 ~atG~~~----------vi~--~~~~~~mk~gailvNvG~~d 900 (1027)
.|.+++. +.. ....+.+++|.++++.+..+
T Consensus 82 i~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~ 123 (411)
T TIGR03026 82 ICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTVP 123 (411)
T ss_pred EEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcCC
Confidence 9988753 111 22245679999999987653
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0058 Score=65.85 Aligned_cols=20 Identities=20% Similarity=0.253 Sum_probs=16.7
Q ss_pred CcEEEEEechhHHHHHHHHH
Q psy15208 107 LPIILAGFSFGTFVQAKLQK 126 (1027)
Q Consensus 107 ~pviLVGhSmGG~vAl~~A~ 126 (1027)
.++.++||||||.++-.+..
T Consensus 78 ~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALG 97 (217)
T ss_pred ccceEEEecccHHHHHHHHH
Confidence 47999999999999865554
|
|
| >PRK07589 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.011 Score=68.25 Aligned_cols=98 Identities=23% Similarity=0.326 Sum_probs=73.1
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHH-H---hhcCcE---EcCHHHHhccCCEEEecCCCc---
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQ-A---AMEGFL---VVTMEYAKKYGDIFVTCTGNY--- 876 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~-A---~~~G~~---v~~~~e~l~~aDvvi~atG~~--- 876 (1027)
.-++++|+|+|..++..++.+.. +.. +|.|+++++.++.. + ...|++ +.+.++++.++|||++||.++
T Consensus 128 da~~l~iiGaG~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIIvtaT~S~~~~ 207 (346)
T PRK07589 128 DSRTMALIGNGAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAEAVEGADIITTVTADKTNA 207 (346)
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCCC
Confidence 35899999999999988766554 445 79999999977553 1 112443 346899999999999999654
Q ss_pred ccCcHHHHhcCCCCeEEEEecCCC---cccchhhhh
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHFD---NEIEVEKLK 909 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~d---~eid~~~l~ 909 (1027)
.++..+ .+|+|+.+.-+|.+. .|+|-+.+.
T Consensus 208 Pvl~~~---~lkpG~hV~aIGs~~p~~~Eld~~~l~ 240 (346)
T PRK07589 208 TILTDD---MVEPGMHINAVGGDCPGKTELHPDILR 240 (346)
T ss_pred ceecHH---HcCCCcEEEecCCCCCCcccCCHHHHh
Confidence 556654 579999999999862 577766443
|
|
| >KOG3101|consensus | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.002 Score=67.62 Aligned_cols=124 Identities=15% Similarity=0.140 Sum_probs=72.4
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcC--CCC---CCCC-CCCCCc---
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNF--RGV---GASS-GTYDSG--- 86 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~Dl--rGh---G~S~-g~~~~~--- 86 (1027)
.+..-+|.|+..+++.+-|++.++-|+..+-.++..+ ..+-+.-+.+|+.|+.||- ||. |+++ ..+...
T Consensus 27 ~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~K--sg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGF 104 (283)
T KOG3101|consen 27 SMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEK--SGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGF 104 (283)
T ss_pred ceEEEEecCCCcccCCcCceEEEecCCcccchhhHhh--hhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCcee
Confidence 4555677787655556689999999985433332211 1234444568999999996 443 2222 111111
Q ss_pred ------c------chHHHH-HHHHHHHH-HhCCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 87 ------N------GETDDM-EILLRYIQ-KKYPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 87 ------~------~~~~Dv-~avl~~L~-~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+ .+.+-+ .++.+.+. ...+. .++.+.||||||.=|+-.+.+.|. +.+.+-+.+|-
T Consensus 105 YvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~--kykSvSAFAPI 175 (283)
T KOG3101|consen 105 YVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPS--KYKSVSAFAPI 175 (283)
T ss_pred EEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcc--cccceeccccc
Confidence 1 111111 22333332 12222 248999999999999999999887 56666666653
|
|
| >cd05281 TDH Threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0051 Score=70.14 Aligned_cols=92 Identities=21% Similarity=0.238 Sum_probs=71.3
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HH---HHh--ccCCEEEecCCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----ME---YAK--KYGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~---e~l--~~aDvvi~atG~ 875 (1027)
..|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|.+ +++ .. +.. ...|+++++.|.
T Consensus 162 ~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~vd~vld~~g~ 241 (341)
T cd05281 162 VSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGVDVVLEMSGN 241 (341)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCCCCEEEECCCC
Confidence 479999999999999999999999999 798887777777777777764 222 11 111 247999999987
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
.+.+. +.++.|++++.++.+|..+
T Consensus 242 ~~~~~-~~~~~l~~~G~~v~~g~~~ 265 (341)
T cd05281 242 PKAIE-QGLKALTPGGRVSILGLPP 265 (341)
T ss_pred HHHHH-HHHHHhccCCEEEEEccCC
Confidence 66444 5588999999999998754
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0076 Score=69.66 Aligned_cols=91 Identities=19% Similarity=0.169 Sum_probs=72.7
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh-----ccCCEEEecCCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEYAK-----KYGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l-----~~aDvvi~atG~ 875 (1027)
..|++|+|.|.|.+|..+++.++++|+ +|++++.++.+...+...|++ +++ ..+.+ ...|++++++|.
T Consensus 185 ~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~ 264 (365)
T cd08278 185 RPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKEEDLVAAIREITGGGVDYALDTTGV 264 (365)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCcEEEECCCC
Confidence 468999999999999999999999999 599999998888777777764 222 22222 247999999987
Q ss_pred cccCcHHHHhcCCCCeEEEEecCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
...+. ..++.|++++.++.+|..
T Consensus 265 ~~~~~-~~~~~l~~~G~~v~~g~~ 287 (365)
T cd08278 265 PAVIE-QAVDALAPRGTLALVGAP 287 (365)
T ss_pred cHHHH-HHHHHhccCCEEEEeCcC
Confidence 65444 558999999999999865
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu |
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0071 Score=72.76 Aligned_cols=82 Identities=18% Similarity=0.202 Sum_probs=60.4
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH-hhcCcEEcCHHHH--hccCCEEE
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA-AMEGFLVVTMEYA--KKYGDIFV 870 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A-~~~G~~v~~~~e~--l~~aDvvi 870 (1027)
.|++..+.+. +..+.+++++|+|+|.+|+.++..+...|++|+++++++.+.... ...+....+.++. +.++|+||
T Consensus 317 ~G~~~~l~~~-~~~~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~~~~~~~~~l~~~DiVI 395 (477)
T PRK09310 317 EGLFSLLKQK-NIPLNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKAFPLESLPELHRIDIII 395 (477)
T ss_pred HHHHHHHHhc-CCCcCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccceechhHhcccCCCCEEE
Confidence 5666666543 556889999999999999999999999999999999887665432 2223233333332 56899999
Q ss_pred ecCCCc
Q psy15208 871 TCTGNY 876 (1027)
Q Consensus 871 ~atG~~ 876 (1027)
+||+..
T Consensus 396 natP~g 401 (477)
T PRK09310 396 NCLPPS 401 (477)
T ss_pred EcCCCC
Confidence 998653
|
|
| >cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0033 Score=70.89 Aligned_cols=93 Identities=20% Similarity=0.223 Sum_probs=71.8
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHH---Hh--ccCCEEEecCCC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEY---AK--KYGDIFVTCTGN 875 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e---~l--~~aDvvi~atG~ 875 (1027)
...|.+|+|.|.|.+|+.+++.++.+|++|++++.++.+...+...|.+ +.+ ..+ .. ...|+++++.|.
T Consensus 163 ~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~vid~~g~ 242 (338)
T cd08254 163 VKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGT 242 (338)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCceEEEECCCC
Confidence 3578999999999999999999999999999999888777666666653 221 111 11 247999999986
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
...+. +.++.|+++|.++.+|...
T Consensus 243 ~~~~~-~~~~~l~~~G~~v~~g~~~ 266 (338)
T cd08254 243 QPTFE-DAQKAVKPGGRIVVVGLGR 266 (338)
T ss_pred HHHHH-HHHHHhhcCCEEEEECCCC
Confidence 65444 4589999999999998754
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio |
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.009 Score=67.57 Aligned_cols=89 Identities=16% Similarity=0.044 Sum_probs=69.8
Q ss_pred cCCEEEEE--cCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh------ccCCEEEecCC
Q psy15208 809 AGKIAVII--GYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK------KYGDIFVTCTG 874 (1027)
Q Consensus 809 ~Gk~VvVi--G~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l------~~aDvvi~atG 874 (1027)
.+.+++|+ |.|.+|..+++.++.+|++|++++.++.+...+...|++ +.+ ..+.+ ...|++++++|
T Consensus 142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g 221 (324)
T cd08291 142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVG 221 (324)
T ss_pred CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCC
Confidence 56666664 889999999999999999999999888888888888875 221 21221 14799999999
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
...+ ...+..++++|.++.+|..
T Consensus 222 ~~~~--~~~~~~l~~~G~~v~~g~~ 244 (324)
T cd08291 222 GGLT--GQILLAMPYGSTLYVYGYL 244 (324)
T ss_pred cHHH--HHHHHhhCCCCEEEEEEec
Confidence 7653 3458899999999999865
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0069 Score=73.12 Aligned_cols=69 Identities=20% Similarity=0.220 Sum_probs=55.8
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcC---HHHHhccCCEEEecCCCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT---MEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~---~~e~l~~aDvvi~atG~~ 876 (1027)
+.|++|+|+|+|.+|+++++.|+..|++|+++|..+.+...+...|+.+.. ..+.+.++|+||.++|-+
T Consensus 10 ~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~l~~~D~VV~SpGi~ 81 (488)
T PRK03369 10 LPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSTSDAVQQIADYALVVTSPGFR 81 (488)
T ss_pred cCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEEcCcchHhHhhcCCEEEECCCCC
Confidence 579999999999999999999999999999999876655445556876543 234567899999988754
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0075 Score=68.37 Aligned_cols=66 Identities=21% Similarity=0.196 Sum_probs=52.7
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH-----------hhcCc-------------E-EcCHHHHhcc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA-----------AMEGF-------------L-VVTMEYAKKY 865 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A-----------~~~G~-------------~-v~~~~e~l~~ 865 (1027)
++|+|+|.|.+|.++|..++..|.+|+++|+++.....+ ...|. + +.++.+++.+
T Consensus 3 ~~V~VIG~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~~ 82 (308)
T PRK06129 3 GSVAIIGAGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVAD 82 (308)
T ss_pred cEEEEECccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhCC
Confidence 479999999999999999999999999999998654432 12342 3 4467788899
Q ss_pred CCEEEecCCCc
Q psy15208 866 GDIFVTCTGNY 876 (1027)
Q Consensus 866 aDvvi~atG~~ 876 (1027)
+|+|++++...
T Consensus 83 ad~Vi~avpe~ 93 (308)
T PRK06129 83 ADYVQESAPEN 93 (308)
T ss_pred CCEEEECCcCC
Confidence 99999998654
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0061 Score=70.08 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=69.2
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcE---EEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYI---SIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~---Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
.-+++++||+....+ .|..+...+...|+. ++.+++++- .... +.......+.+.++......+..++
T Consensus 59 ~~pivlVhG~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~---~~~~~~~ql~~~V~~~l~~~ga~~v 129 (336)
T COG1075 59 KEPIVLVHGLGGGYG-----NFLPLDYRLAILGWLTNGVYAFELSGG-DGTY---SLAVRGEQLFAYVDEVLAKTGAKKV 129 (336)
T ss_pred CceEEEEccCcCCcc-----hhhhhhhhhcchHHHhccccccccccc-CCCc---cccccHHHHHHHHHHHHhhcCCCce
Confidence 346799999733222 255566667777777 888888865 1111 1112334444444444444455689
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
.|+||||||.++..++...+...+++.++.++++-.
T Consensus 130 ~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 130 NLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred EEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 999999999999999999884347999999997643
|
|
| >cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0075 Score=69.96 Aligned_cols=91 Identities=20% Similarity=0.203 Sum_probs=70.9
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcEEcC-----HHHHh-----ccCCEEEecCCCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFLVVT-----MEYAK-----KYGDIFVTCTGNY 876 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~v~~-----~~e~l-----~~aDvvi~atG~~ 876 (1027)
..|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|+...+ ..+.+ ...|++++++|..
T Consensus 175 ~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~~d~v~d~~g~~ 254 (375)
T cd08282 175 QPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIPIDFSDGDPVEQILGLEPGGVDRAVDCVGYE 254 (375)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCeEeccCcccHHHHHHHhhCCCCCEEEECCCCc
Confidence 479999999999999999999999998 799999988888877778864321 11111 1479999999865
Q ss_pred c-----------cCcHHHHhcCCCCeEEEEecCC
Q psy15208 877 H-----------VITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 877 ~-----------vi~~~~~~~mk~gailvNvG~~ 899 (1027)
. .++ +.++.+++++.++.+|..
T Consensus 255 ~~~~~~~~~~~~~~~-~~~~~l~~~g~~~~~g~~ 287 (375)
T cd08282 255 ARDRGGEAQPNLVLN-QLIRVTRPGGGIGIVGVY 287 (375)
T ss_pred ccccccccchHHHHH-HHHHHhhcCcEEEEEecc
Confidence 2 133 458889999999988875
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo |
| >cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.004 Score=70.76 Aligned_cols=91 Identities=19% Similarity=0.266 Sum_probs=70.0
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcCHH------H------Hh--ccCCEEEe
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVTME------Y------AK--KYGDIFVT 871 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~~~------e------~l--~~aDvvi~ 871 (1027)
-.|++|+|.|.|.+|..+++.++.+|++ |++++.++.+...+...|.+ +.+.. + .. ...|++++
T Consensus 160 ~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~vid 239 (341)
T cd08262 160 TPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFE 239 (341)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCCCCEEEE
Confidence 4789999999999999999999999996 77788788777777777764 33211 1 11 23799999
Q ss_pred cCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 872 CTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 872 atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+.|+...+. +.++.+++++.++++|..
T Consensus 240 ~~g~~~~~~-~~~~~l~~~g~~v~~g~~ 266 (341)
T cd08262 240 CVGAPGLIQ-QIIEGAPPGGRIVVVGVC 266 (341)
T ss_pred CCCCHHHHH-HHHHHhccCCEEEEECCC
Confidence 998753333 458889999999999875
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0054 Score=68.99 Aligned_cols=89 Identities=16% Similarity=0.028 Sum_probs=70.7
Q ss_pred cCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHH----HHh-----ccCCEEEecCCCcc
Q psy15208 809 AGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTME----YAK-----KYGDIFVTCTGNYH 877 (1027)
Q Consensus 809 ~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~----e~l-----~~aDvvi~atG~~~ 877 (1027)
.|++|+|.|. |.+|..+++.++.+|++|++++.++.+...+...|++ +.+.. +.+ ...|++++++|...
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~~ 225 (326)
T cd08289 146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKT 225 (326)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHHH
Confidence 4789999999 9999999999999999999998888887777777763 33211 111 23799999998753
Q ss_pred cCcHHHHhcCCCCeEEEEecCC
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+ ...++.|+++|.++.+|..
T Consensus 226 -~-~~~~~~l~~~G~~i~~g~~ 245 (326)
T cd08289 226 -L-AYLLSTLQYGGSVAVSGLT 245 (326)
T ss_pred -H-HHHHHHhhcCCEEEEEeec
Confidence 3 3568999999999999975
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.006 Score=81.62 Aligned_cols=92 Identities=11% Similarity=0.029 Sum_probs=76.0
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCCCcccCcH------
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTGNYHVITH------ 881 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG~~~vi~~------ 881 (1027)
.+++|++||.|.+|..+|+.|...|..|.|+|+++.+.......|..+ .++.++...+|+||++..+...+..
T Consensus 3 ~~~~IGfIGLG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~~~v~~V~~g~~ 82 (1378)
T PLN02858 3 SAGVVGFVGLDSLSFELASSLLRSGFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHPDQVDDVFFGDE 82 (1378)
T ss_pred CCCeEEEEchhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCChHHHHHHHhchh
Confidence 467899999999999999999999999999999998888777788874 4688888899999998766543221
Q ss_pred HHHhcCCCCeEEEEecCCC
Q psy15208 882 DHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d 900 (1027)
..++.+++|.++++++..+
T Consensus 83 g~~~~l~~g~iivd~STi~ 101 (1378)
T PLN02858 83 GAAKGLQKGAVILIRSTIL 101 (1378)
T ss_pred hHHhcCCCcCEEEECCCCC
Confidence 2356689999999998764
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0047 Score=72.00 Aligned_cols=80 Identities=20% Similarity=0.234 Sum_probs=63.8
Q ss_pred cCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcc---cCcHHHH
Q psy15208 809 AGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYH---VITHDHM 884 (1027)
Q Consensus 809 ~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~---vi~~~~~ 884 (1027)
..++|+|+| .|.+|..+|+.++..|-.|+++|+++. .+.++++.++|+||.|++... ++. + +
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~------------~~~~~~~~~aDlVilavP~~~~~~~~~-~-l 162 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW------------DRAEDILADAGMVIVSVPIHLTEEVIA-R-L 162 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc------------hhHHHHHhcCCEEEEeCcHHHHHHHHH-H-H
Confidence 458999999 999999999999999999999998652 245677889999999987543 221 2 4
Q ss_pred hcCCCCeEEEEecCCCcc
Q psy15208 885 RDMKDQAIVCNIGHFDNE 902 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d~e 902 (1027)
..+++|++++.+|.....
T Consensus 163 ~~l~~~~iv~Dv~SvK~~ 180 (374)
T PRK11199 163 PPLPEDCILVDLTSVKNA 180 (374)
T ss_pred hCCCCCcEEEECCCccHH
Confidence 448999999999997543
|
|
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0062 Score=81.46 Aligned_cols=92 Identities=17% Similarity=0.090 Sum_probs=75.1
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCCCcc----cC--cH
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTGNYH----VI--TH 881 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG~~~----vi--~~ 881 (1027)
..++|++||.|.+|..+|..|...|.+|+++|+++.+.......|.. ..+..+++..+|+|+.+..+.. ++ ..
T Consensus 323 ~~~~IGfIGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~~~~aDvVi~~V~~~~~v~~Vl~g~~ 402 (1378)
T PLN02858 323 PVKRIGFIGLGAMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIMVANEVQAENVLFGDL 402 (1378)
T ss_pred CCCeEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEecCChHHHHHHHhchh
Confidence 36789999999999999999999999999999999877766666765 4578888999999999887653 32 12
Q ss_pred HHHhcCCCCeEEEEecCCC
Q psy15208 882 DHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d 900 (1027)
..++.+++|.++++.+..+
T Consensus 403 g~~~~l~~g~ivVd~STvs 421 (1378)
T PLN02858 403 GAVSALPAGASIVLSSTVS 421 (1378)
T ss_pred hHHhcCCCCCEEEECCCCC
Confidence 3467789999999998754
|
|
| >PRK08291 ectoine utilization protein EutC; Validated | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.012 Score=67.38 Aligned_cols=98 Identities=21% Similarity=0.175 Sum_probs=72.9
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHHHhh-----cCcE---EcCHHHHhccCCEEEecCCCc-c
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQAAM-----EGFL---VVTMEYAKKYGDIFVTCTGNY-H 877 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~A~~-----~G~~---v~~~~e~l~~aDvvi~atG~~-~ 877 (1027)
..++++|+|+|..|+..+..+.. .+. +|.++++++.++..... .|+. ..++++++.++|+|++||+.. .
T Consensus 131 ~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al~~aDiVi~aT~s~~p 210 (330)
T PRK08291 131 DASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHEAVAGADIIVTTTPSEEP 210 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHHHHccCCEEEEeeCCCCc
Confidence 46899999999999999888875 565 79999999877654221 2555 346788899999999998765 4
Q ss_pred cCcHHHHhcCCCCeEEEEecCC---Ccccchhhhh
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHF---DNEIEVEKLK 909 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~---d~eid~~~l~ 909 (1027)
++..+ .+++|..+.-+|.. ..|+|.+.+.
T Consensus 211 ~i~~~---~l~~g~~v~~vg~d~~~~rEld~~~l~ 242 (330)
T PRK08291 211 ILKAE---WLHPGLHVTAMGSDAEHKNEIAPAVFA 242 (330)
T ss_pred EecHH---HcCCCceEEeeCCCCCCcccCCHHHHh
Confidence 55544 47888888777775 3577766544
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0049 Score=73.60 Aligned_cols=169 Identities=14% Similarity=0.077 Sum_probs=119.1
Q ss_pred CceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 3 SNTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 3 m~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
+..++.+..+.|| +|++++.. ++.+.. +.|++|+--|+ +.-+. ...|......+.++|...+..+.||=|+-..
T Consensus 392 ~~veQ~~atSkDGT~IPYFiv~-K~~~~d-~~pTll~aYGG--F~vsl-tP~fs~~~~~WLerGg~~v~ANIRGGGEfGp 466 (648)
T COG1505 392 YEVEQFFATSKDGTRIPYFIVR-KGAKKD-ENPTLLYAYGG--FNISL-TPRFSGSRKLWLERGGVFVLANIRGGGEFGP 466 (648)
T ss_pred ceEEEEEEEcCCCccccEEEEe-cCCcCC-CCceEEEeccc--ccccc-CCccchhhHHHHhcCCeEEEEecccCCccCH
Confidence 4566777888899 78887766 442222 67885555543 22222 2345444477778899999999999887553
Q ss_pred CC------CCccchHHHHHHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC--------
Q psy15208 82 TY------DSGNGETDDMEILLRYIQKKYPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK-------- 145 (1027)
Q Consensus 82 ~~------~~~~~~~~Dv~avl~~L~~~~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-------- 145 (1027)
.+ .+-+...+|..++.+.|..+.-.. ++.+.|-|-||.+.-...-++|+ .+.++|+--|...
T Consensus 467 ~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPe--lfgA~v~evPllDMlRYh~l~ 544 (648)
T COG1505 467 EWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPE--LFGAAVCEVPLLDMLRYHLLT 544 (648)
T ss_pred HHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChh--hhCceeeccchhhhhhhcccc
Confidence 21 223457899999999998874332 49999999999999888889999 6777777766422
Q ss_pred ---cC--------------------CCCC-----CCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 146 ---KW--------------------LIPE-----VPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 146 ---~~--------------------~l~~-----i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
.| ++.+ -..|+||-.+..|+-|.|.+++.++.+
T Consensus 545 aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~ 605 (648)
T COG1505 545 AGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAK 605 (648)
T ss_pred cchhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHH
Confidence 12 1222 237899999999999999999877654
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0091 Score=72.23 Aligned_cols=88 Identities=16% Similarity=0.138 Sum_probs=62.6
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh-------------------hcC-cE-EcCHHHHhccCCEE
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA-------------------MEG-FL-VVTMEYAKKYGDIF 869 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-------------------~~G-~~-v~~~~e~l~~aDvv 869 (1027)
++|+|||.|.+|.++|..+...|.+|+++|+++.+..... ..| +. ..++++++.++|+|
T Consensus 5 ~kIavIG~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~V 84 (495)
T PRK07531 5 MKAACIGGGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADWI 84 (495)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCEE
Confidence 5899999999999999999999999999999986643311 112 33 34677889999999
Q ss_pred EecCCCcccCcHHH---H-hcCCCCeEEEEecC
Q psy15208 870 VTCTGNYHVITHDH---M-RDMKDQAIVCNIGH 898 (1027)
Q Consensus 870 i~atG~~~vi~~~~---~-~~mk~gailvNvG~ 898 (1027)
+++.....-+.... + +.++++++|+....
T Consensus 85 ieavpe~~~vk~~l~~~l~~~~~~~~iI~SsTs 117 (495)
T PRK07531 85 QESVPERLDLKRRVLAEIDAAARPDALIGSSTS 117 (495)
T ss_pred EEcCcCCHHHHHHHHHHHHhhCCCCcEEEEcCC
Confidence 99986552122222 2 34677776654443
|
|
| >KOG2237|consensus | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0035 Score=75.09 Aligned_cols=169 Identities=14% Similarity=0.176 Sum_probs=112.9
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
+.+++++++.|| .++..+..-+.....+++|.+|+.||. ++-+.. ..|+.--..|.++|+-....|.||=|.-...
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGa--y~isl~-p~f~~srl~lld~G~Vla~a~VRGGGe~G~~ 516 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGA--YGISLD-PSFRASRLSLLDRGWVLAYANVRGGGEYGEQ 516 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecc--cceeec-cccccceeEEEecceEEEEEeeccCcccccc
Confidence 456788999999 566655443322223578986666663 333332 3454433445668998888999998765533
Q ss_pred CC------CccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC---------
Q psy15208 83 YD------SGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK--------- 145 (1027)
Q Consensus 83 ~~------~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~--------- 145 (1027)
+. .-++..+|..+.+++|.... ...+..+.|.|.||.++-.+..++|+ .+.++|+--|...
T Consensus 517 WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPd--LF~avia~VpfmDvL~t~~~ti 594 (712)
T KOG2237|consen 517 WHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPD--LFGAVIAKVPFMDVLNTHKDTI 594 (712)
T ss_pred hhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCch--HhhhhhhcCcceehhhhhccCc
Confidence 21 12457899999999998752 23369999999999999999999999 7788887776432
Q ss_pred --cC--------------------CCC---CC-----CCcEEEEEeCCCCCCChHHHHhhhC
Q psy15208 146 --KW--------------------LIP---EV-----PKNTIIIHGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 146 --~~--------------------~l~---~i-----~~PvLiIhG~~D~iVP~~~~~~l~~ 177 (1027)
-| .+. ++ ...+|+..+..|+-|++.++..|..
T Consensus 595 lplt~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vA 656 (712)
T KOG2237|consen 595 LPLTTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVA 656 (712)
T ss_pred cccchhhhcccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHH
Confidence 11 011 11 2457888999988888777665554
|
|
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0066 Score=67.72 Aligned_cols=86 Identities=17% Similarity=0.074 Sum_probs=62.6
Q ss_pred CCEEEEEcCChhHHHHHHHHHh--CCCEEE-EEcCCchhHHH-HhhcCc--EEcCHHHHhccCCEEEecCCCcccCcHHH
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRA--LSAQVW-IIEIDPICALQ-AAMEGF--LVVTMEYAKKYGDIFVTCTGNYHVITHDH 883 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~--~Ga~Vi-V~d~dp~r~~~-A~~~G~--~v~~~~e~l~~aDvvi~atG~~~vi~~~~ 883 (1027)
..+|+|+|+|.||+.+++.+.. .+++|. |+|+++.++.. +...|. ...++++++.++|+|+.|+++.. ..+-.
T Consensus 6 ~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~~~~eell~~~D~Vvi~tp~~~-h~e~~ 84 (271)
T PRK13302 6 ELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPVVPLDQLATHADIVVEAAPASV-LRAIV 84 (271)
T ss_pred eeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcccCCHHHHhcCCCEEEECCCcHH-HHHHH
Confidence 4789999999999999999886 477765 78999877654 334453 24578888889999999998753 23333
Q ss_pred HhcCCCCeEEEEe
Q psy15208 884 MRDMKDQAIVCNI 896 (1027)
Q Consensus 884 ~~~mk~gailvNv 896 (1027)
...++.|.-++..
T Consensus 85 ~~aL~aGk~Vi~~ 97 (271)
T PRK13302 85 EPVLAAGKKAIVL 97 (271)
T ss_pred HHHHHcCCcEEEe
Confidence 4556777655543
|
|
| >cd05284 arabinose_DH_like D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.012 Score=66.77 Aligned_cols=93 Identities=19% Similarity=0.193 Sum_probs=71.6
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCC-CEEEEEcCCchhHHHHhhcCcE-EcC--------HHHHhc--cCCEEEecCC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALS-AQVWIIEIDPICALQAAMEGFL-VVT--------MEYAKK--YGDIFVTCTG 874 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~G-a~ViV~d~dp~r~~~A~~~G~~-v~~--------~~e~l~--~aDvvi~atG 874 (1027)
...|++|+|.|.|.+|+.+++.++..| ++|++++.++.+.......|++ +.+ +.+... ..|++++++|
T Consensus 165 ~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~dvvld~~g 244 (340)
T cd05284 165 LDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDDVVEEVRELTGGRGADAVIDFVG 244 (340)
T ss_pred CCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCccHHHHHHHHhCCCCCCEEEEcCC
Confidence 357999999999999999999999999 7999988887776666666753 222 112222 4799999998
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
....+ .+.++.+++++.++.+|..+
T Consensus 245 ~~~~~-~~~~~~l~~~g~~i~~g~~~ 269 (340)
T cd05284 245 SDETL-ALAAKLLAKGGRYVIVGYGG 269 (340)
T ss_pred CHHHH-HHHHHHhhcCCEEEEEcCCC
Confidence 75433 45589999999999998764
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d |
| >cd08232 idonate-5-DH L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0076 Score=68.40 Aligned_cols=91 Identities=19% Similarity=0.226 Sum_probs=69.4
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH-----HHh---ccCCEEEecCCCccc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME-----YAK---KYGDIFVTCTGNYHV 878 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~-----e~l---~~aDvvi~atG~~~v 878 (1027)
.|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|.+ +++.+ +.. ...|+++++.|....
T Consensus 165 ~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~vd~vld~~g~~~~ 244 (339)
T cd08232 165 AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFDVVFEASGAPAA 244 (339)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCccEEEECCCCHHH
Confidence 89999999999999999999999999 799998877666555666653 33221 222 137999999986443
Q ss_pred CcHHHHhcCCCCeEEEEecCCC
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~d 900 (1027)
+ .+.++.|++++.++++|..+
T Consensus 245 ~-~~~~~~L~~~G~~v~~g~~~ 265 (339)
T cd08232 245 L-ASALRVVRPGGTVVQVGMLG 265 (339)
T ss_pred H-HHHHHHHhcCCEEEEEecCC
Confidence 3 35589999999999998654
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai |
| >cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1 | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.023 Score=63.23 Aligned_cols=120 Identities=18% Similarity=0.279 Sum_probs=85.5
Q ss_pred hhhhhHHHHHh---hhcCccccCCEEEEEcCChhHHHHHHHHHhC----CC-------EEEEEcCC-----------chh
Q psy15208 791 GCRESLIDGIK---RATDVMIAGKIAVIIGYGDVGKGSAQAMRAL----SA-------QVWIIEID-----------PIC 845 (1027)
Q Consensus 791 g~~~s~~~~i~---r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~----Ga-------~ViV~d~d-----------p~r 845 (1027)
||+-....++. +.++..+...+++++|+|.-|.++|+.+... |+ ++.++|.+ +.+
T Consensus 3 GTa~V~lAgllnAlk~~g~~l~d~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~ 82 (279)
T cd05312 3 GTAAVALAGLLAALRITGKPLSDQRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFK 82 (279)
T ss_pred hHHHHHHHHHHHHHHHhCCChhhcEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHH
Confidence 55554444433 3557778999999999999999999999887 87 78888765 222
Q ss_pred HHHHhhcC-cEEcCHHHHhc--cCCEEEecCCCcccCcHHHHhcCC---CCeEEEEecCCCc--ccchhhhhc
Q psy15208 846 ALQAAMEG-FLVVTMEYAKK--YGDIFVTCTGNYHVITHDHMRDMK---DQAIVCNIGHFDN--EIEVEKLKK 910 (1027)
Q Consensus 846 ~~~A~~~G-~~v~~~~e~l~--~aDvvi~atG~~~vi~~~~~~~mk---~gailvNvG~~d~--eid~~~l~~ 910 (1027)
...|.... -...++.|+++ .+|++|-+++..++++++.++.|. +..++.-..-... |+..+...+
T Consensus 83 ~~~a~~~~~~~~~~L~e~i~~v~ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~~E~~pe~a~~ 155 (279)
T cd05312 83 KPFARKDEEKEGKSLLEVVKAVKPTVLIGLSGVGGAFTEEVVRAMAKSNERPIIFALSNPTSKAECTAEDAYK 155 (279)
T ss_pred HHHHhhcCcccCCCHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCCcCCccccCHHHHHH
Confidence 33343322 13457999998 889999998877899999999998 6666655544433 666555544
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH |
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0078 Score=68.16 Aligned_cols=88 Identities=19% Similarity=0.178 Sum_probs=61.1
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-----cC--------------cE-EcCHHHHhccCCEEE
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-----EG--------------FL-VVTMEYAKKYGDIFV 870 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-----~G--------------~~-v~~~~e~l~~aDvvi 870 (1027)
++|+|+|.|.+|.++|..+...|.+|+++|+++.+...+.. .| .. ..+.++++.++|+||
T Consensus 5 ~~I~vIGaG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlVi 84 (311)
T PRK06130 5 QNLAIIGAGTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADLVI 84 (311)
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCEEE
Confidence 68999999999999999999999999999998866543322 12 12 235667788999999
Q ss_pred ecCCCcccCcHHH---Hh-cCCCCeEEE-EecC
Q psy15208 871 TCTGNYHVITHDH---MR-DMKDQAIVC-NIGH 898 (1027)
Q Consensus 871 ~atG~~~vi~~~~---~~-~mk~gailv-NvG~ 898 (1027)
.|+....-+.... ++ .++++++++ |++.
T Consensus 85 ~av~~~~~~~~~v~~~l~~~~~~~~ii~s~tsg 117 (311)
T PRK06130 85 EAVPEKLELKRDVFARLDGLCDPDTIFATNTSG 117 (311)
T ss_pred EeccCcHHHHHHHHHHHHHhCCCCcEEEECCCC
Confidence 9986542112222 32 356676664 4443
|
|
| >cd08234 threonine_DH_like L-threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0076 Score=68.10 Aligned_cols=92 Identities=18% Similarity=0.135 Sum_probs=71.1
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcCHHH---------HhccCCEEEecCCCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVTMEY---------AKKYGDIFVTCTGNY 876 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~~~e---------~l~~aDvvi~atG~~ 876 (1027)
..|++|+|.|.|.+|+.+++.++..|++ |++++.++.+...+...|.. +.+..+ .-...|++++++|..
T Consensus 158 ~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~~~~~ 237 (334)
T cd08234 158 KPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDVVIEATGVP 237 (334)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcEEEECCCCh
Confidence 5789999999999999999999999997 88888888777666666663 222111 113589999999865
Q ss_pred ccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
.. ..+.++.|++++.++++|..+
T Consensus 238 ~~-~~~~~~~l~~~G~~v~~g~~~ 260 (334)
T cd08234 238 KT-LEQAIEYARRGGTVLVFGVYA 260 (334)
T ss_pred HH-HHHHHHHHhcCCEEEEEecCC
Confidence 43 345588999999999998764
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0087 Score=68.18 Aligned_cols=92 Identities=16% Similarity=0.185 Sum_probs=71.2
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCC-CEEEEEcCCchhHHHHhhcCcE-EcCHH-----H----Hh--ccCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALS-AQVWIIEIDPICALQAAMEGFL-VVTME-----Y----AK--KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~G-a~ViV~d~dp~r~~~A~~~G~~-v~~~~-----e----~l--~~aDvvi~atG 874 (1027)
..|++|+|.|.|.+|..+++.++.+| .+|++++.++.+...+...|++ +++.. + .. ...|++++++|
T Consensus 165 ~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g 244 (345)
T cd08286 165 KPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRGVDVVIEAVG 244 (345)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhCCCCCCEEEECCC
Confidence 57999999999999999999999999 6899998888777766777764 22211 1 12 24899999998
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
....+ ...++.+++++.++++|..+
T Consensus 245 ~~~~~-~~~~~~l~~~g~~v~~g~~~ 269 (345)
T cd08286 245 IPATF-ELCQELVAPGGHIANVGVHG 269 (345)
T ss_pred CHHHH-HHHHHhccCCcEEEEecccC
Confidence 76543 34468899999999998653
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers ( |
| >PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0066 Score=76.90 Aligned_cols=92 Identities=21% Similarity=0.225 Sum_probs=70.9
Q ss_pred CEEEEEcCChhHHHHHHHHHhCC--CEEEEEcCCchhHHHHhhcCcE---EcCHHHHhccCCEEEecCCCcccCc--HHH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALS--AQVWIIEIDPICALQAAMEGFL---VVTMEYAKKYGDIFVTCTGNYHVIT--HDH 883 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~G--a~ViV~d~dp~r~~~A~~~G~~---v~~~~e~l~~aDvvi~atG~~~vi~--~~~ 883 (1027)
++|+|+|+|.+|..+|+.++..| .+|+++|+++.+...+...|+. ..+.++++.++|+||.|++...+.. .+.
T Consensus 4 ~~I~IIG~G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~l 83 (735)
T PRK14806 4 GRVVVIGLGLIGGSFAKALRERGLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPVLAMEKVLADL 83 (735)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCHHHHHHHHHHH
Confidence 78999999999999999999988 4899999999887777777763 3457778889999999997543111 111
Q ss_pred HhcCCCCeEEEEecCCCcc
Q psy15208 884 MRDMKDQAIVCNIGHFDNE 902 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d~e 902 (1027)
-..++++.++++++.....
T Consensus 84 ~~~~~~~~ii~d~~svk~~ 102 (735)
T PRK14806 84 KPLLSEHAIVTDVGSTKGN 102 (735)
T ss_pred HHhcCCCcEEEEcCCCchH
Confidence 2345788899999876533
|
|
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0093 Score=69.55 Aligned_cols=90 Identities=19% Similarity=0.081 Sum_probs=70.8
Q ss_pred ccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCH--------------------------
Q psy15208 808 IAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTM-------------------------- 859 (1027)
Q Consensus 808 l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~-------------------------- 859 (1027)
..|++|+|.|. |.+|..+++.++.+|++|++++.++.+...+...|.+ +++.
T Consensus 192 ~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (393)
T cd08246 192 KPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARR 271 (393)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccch
Confidence 57899999997 9999999999999999988888888888888888853 1211
Q ss_pred -HHH----hc---cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 860 -EYA----KK---YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 860 -~e~----l~---~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.+. .. ..|+|++++|.. .+. +.++.|+++++++.+|..
T Consensus 272 ~~~~v~~l~~~~~g~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~~ 317 (393)
T cd08246 272 FGKAIWDILGGREDPDIVFEHPGRA-TFP-TSVFVCDRGGMVVICAGT 317 (393)
T ss_pred HHHHHHHHhCCCCCCeEEEECCchH-hHH-HHHHHhccCCEEEEEccc
Confidence 111 11 579999999874 344 468999999999999864
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >TIGR00658 orni_carb_tr ornithine carbamoyltransferase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.37 Score=54.80 Aligned_cols=130 Identities=20% Similarity=0.081 Sum_probs=89.0
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhH
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICA 846 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~ 846 (1027)
..+||||..++ .-| .-|.+.|- +.+..+ .+.|.+|+++|- +++-+..+..++.+|++|.++-+.....
T Consensus 115 ~~vPVINa~~~-~~H-------PtQaL~Dl~Ti~e~~g-~l~g~~v~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~ 185 (304)
T TIGR00658 115 ASVPVINGLTD-LFH-------PCQALADLLTIIEHFG-KLKGVKVVYVGDGNNVCNSLMLAGAKLGMDVVVATPEGYEP 185 (304)
T ss_pred CCCCEEECCCC-CCC-------hHHHHHHHHHHHHHhC-CCCCcEEEEEeCCCchHHHHHHHHHHcCCEEEEECCchhcC
Confidence 67999998542 222 23555543 333334 379999999998 5588899999999999999984322111
Q ss_pred -----H----HHhhcCcE---EcCHHHHhccCCEEEecC----CC------------cccCcHHHHhcCCCCeEEEEecC
Q psy15208 847 -----L----QAAMEGFL---VVTMEYAKKYGDIFVTCT----GN------------YHVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 847 -----~----~A~~~G~~---v~~~~e~l~~aDvvi~at----G~------------~~vi~~~~~~~mk~gailvNvG~ 898 (1027)
. .+...|.. ..+++++++++|||.+-. +. .-.++++.++.+|+++++.-.+.
T Consensus 186 ~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~~w~~~~~~~~~~~~~~~~~~y~l~~~~l~~~~~~~ivmHplP 265 (304)
T TIGR00658 186 DADIVKKAQEIAKENGGSVELTHDPVEAVKGADVIYTDVWVSMGEEDKKEERLKLFRPYQVNEELMELAKPEVIFMHCLP 265 (304)
T ss_pred CHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcCcccCccccccHHHHHHhcCCcCCHHHHhhcCCCCEEECCCC
Confidence 1 13345643 457899999999998632 11 12688888899999999998887
Q ss_pred C--Ccccchhhh
Q psy15208 899 F--DNEIEVEKL 908 (1027)
Q Consensus 899 ~--d~eid~~~l 908 (1027)
. +.||+-+.+
T Consensus 266 ~~rg~Ei~~~V~ 277 (304)
T TIGR00658 266 AHRGEEVTDEVI 277 (304)
T ss_pred CCCCceeCHHHh
Confidence 6 357776643
|
Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily. |
| >KOG0067|consensus | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0028 Score=71.51 Aligned_cols=101 Identities=20% Similarity=0.205 Sum_probs=79.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCC----CcccCcH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTG----NYHVITH 881 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG----~~~vi~~ 881 (1027)
.+.|.+.+++|+|++|+.++.++++||-.|+.+|..-. .-.-..+|.+ |-++.+.+.++|-+..... +.++++.
T Consensus 175 ~~~G~~~g~~g~gr~g~av~~~A~afg~~~ifydp~~~-~g~~~~lg~~rVytlqd~~~~sd~~S~hc~~~~~~h~lin~ 253 (435)
T KOG0067|consen 175 RIRGPTLGLIGFGRTGQAVALRAKAFGFVVIFYDPYLI-DGIDKSLGLQRVYTLQDLLYQSDCVSLHCNLNEHNHELIND 253 (435)
T ss_pred cccccceeeeccccccceehhhhhcccceeeeecchhh-hhhhhhcccceecccchhhhhccceeeecccCccccccccc
Confidence 36899999999999999999999999999999955432 2224456665 5578899999999886542 5578887
Q ss_pred HHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 882 DHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
-.+.+|+.|+.++|+.+. .-+|.+.|.
T Consensus 254 ~tikqm~qGaflvnta~g-glvdekaLa 280 (435)
T KOG0067|consen 254 FTIKQMRQGAFLVNTARG-GLVDEKALA 280 (435)
T ss_pred ccceeecccceEeeeccc-ccCChHHHH
Confidence 779999999999999886 334555554
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.012 Score=66.82 Aligned_cols=86 Identities=13% Similarity=0.096 Sum_probs=63.7
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc--------------CcE-EcCHHHHhccCCEEEecCCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME--------------GFL-VVTMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~--------------G~~-v~~~~e~l~~aDvvi~atG~~ 876 (1027)
+|+|+|.|.+|..+|..+...|.+|+++++++....+.... +.. ..+.++++..+|+||.|+...
T Consensus 3 kI~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~~ 82 (325)
T PRK00094 3 KIAVLGAGSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVPSQ 82 (325)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCCHH
Confidence 69999999999999999999999999999988665544443 233 335667788999999998764
Q ss_pred ccCc--HHHHhcCCCCeEEEEec
Q psy15208 877 HVIT--HDHMRDMKDQAIVCNIG 897 (1027)
Q Consensus 877 ~vi~--~~~~~~mk~gailvNvG 897 (1027)
.+-. .+....++++.+++++.
T Consensus 83 ~~~~v~~~l~~~~~~~~~vi~~~ 105 (325)
T PRK00094 83 ALREVLKQLKPLLPPDAPIVWAT 105 (325)
T ss_pred HHHHHHHHHHhhcCCCCEEEEEe
Confidence 3111 12234467888888873
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0092 Score=67.67 Aligned_cols=77 Identities=14% Similarity=0.192 Sum_probs=60.2
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcH--HHHh-
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITH--DHMR- 885 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~--~~~~- 885 (1027)
.+.+|+|+|+|.+|..+|+.+...|.+|.++++++. .++++++.++|+|+.++.... +.. +.+.
T Consensus 3 ~~m~I~iiG~G~~G~~lA~~l~~~G~~V~~~~r~~~------------~~~~~~~~~advvi~~vp~~~-~~~v~~~l~~ 69 (308)
T PRK14619 3 QPKTIAILGAGAWGSTLAGLASANGHRVRVWSRRSG------------LSLAAVLADADVIVSAVSMKG-VRPVAEQVQA 69 (308)
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCEEEEEeCCCC------------CCHHHHHhcCCEEEEECChHH-HHHHHHHHHH
Confidence 457899999999999999999999999999988763 356788889999999887652 111 1233
Q ss_pred -cCCCCeEEEEecC
Q psy15208 886 -DMKDQAIVCNIGH 898 (1027)
Q Consensus 886 -~mk~gailvNvG~ 898 (1027)
.++++.+++++.-
T Consensus 70 ~~~~~~~ivi~~s~ 83 (308)
T PRK14619 70 LNLPPETIIVTATK 83 (308)
T ss_pred hcCCCCcEEEEeCC
Confidence 3678889988753
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0072 Score=65.57 Aligned_cols=66 Identities=29% Similarity=0.283 Sum_probs=53.0
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh--cCcEEcC--------HHHH-hccCCEEEecCCCc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM--EGFLVVT--------MEYA-KKYGDIFVTCTGNY 876 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~--~G~~v~~--------~~e~-l~~aDvvi~atG~~ 876 (1027)
++++|+|+|.+|+.+|+.|...|..|+++|.|+.+..++.. .+..+.. +.++ +.++|+++-+||+.
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d 77 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGND 77 (225)
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCC
Confidence 57999999999999999999999999999999988877333 4444331 3444 45789999999874
|
|
| >cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.012 Score=65.32 Aligned_cols=90 Identities=20% Similarity=0.183 Sum_probs=71.6
Q ss_pred cCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-Ec-CHHHHh-ccCCEEEecCCCcccCcHHHH
Q psy15208 809 AGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VV-TMEYAK-KYGDIFVTCTGNYHVITHDHM 884 (1027)
Q Consensus 809 ~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~-~~~e~l-~~aDvvi~atG~~~vi~~~~~ 884 (1027)
.|++|+|.|. |.+|+.+++.++.+|++|+++..++.+...+...|+. +. ..++.. ...|++++++|... + .+.+
T Consensus 132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vl~~~g~~~-~-~~~~ 209 (305)
T cd08270 132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGSELSGAPVDLVVDSVGGPQ-L-ARAL 209 (305)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccccccCCCceEEEECCCcHH-H-HHHH
Confidence 5999999999 8999999999999999999998888777777777763 21 212211 25899999998763 3 4569
Q ss_pred hcCCCCeEEEEecCCC
Q psy15208 885 RDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d 900 (1027)
+.|+.+++++++|..+
T Consensus 210 ~~l~~~G~~v~~g~~~ 225 (305)
T cd08270 210 ELLAPGGTVVSVGSSS 225 (305)
T ss_pred HHhcCCCEEEEEeccC
Confidence 9999999999998653
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK14805 ornithine carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.45 Score=54.01 Aligned_cols=129 Identities=19% Similarity=0.066 Sum_probs=82.9
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCch--
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPI-- 844 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~-- 844 (1027)
..+||||.-+.. -| .-|.+.|. +.+.-+ .+.|++|+++|-+. +.+..+..+..+|++|.++-+...
T Consensus 114 ~~vPVINa~~~~-~H-------PtQaL~Dl~Ti~e~~g-~l~g~kva~vGD~~~v~~S~~~~~~~~g~~v~~~~P~~~~~ 184 (302)
T PRK14805 114 GSVPVINALCDL-YH-------PCQALADFLTLAEQFG-DVSKVKLAYVGDGNNVTHSLMYGAAILGATMTVICPPGHFP 184 (302)
T ss_pred CCCCEEECCCCC-CC-------hHHHHHHHHHHHHHhC-CcCCcEEEEEcCCCccHHHHHHHHHHcCCEEEEECCchhcC
Confidence 679999986641 22 23555443 223334 48999999999866 778889999999999999843221
Q ss_pred -hH--H----HHhhcCcEE--cCHHHHhccCCEEEecC----C------------CcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 845 -CA--L----QAAMEGFLV--VTMEYAKKYGDIFVTCT----G------------NYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 845 -r~--~----~A~~~G~~v--~~~~e~l~~aDvvi~at----G------------~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.. . .+...|..+ .+-.++++.+|||.+.+ | ..--++.+.++.+|+. ++...+..
T Consensus 185 ~~~~~~~a~~~~~~~g~~~~~~~d~~a~~~aDvvy~~~w~~~~~~~~~~~~~~~~~~y~vt~~~l~~a~~~-~vmH~lP~ 263 (302)
T PRK14805 185 DGQIVAEAQELAAKSGGKLVLTSDIEAIEGHDAIYTDTWISMGDDTPLAEIKAKFAPYQVNKALMEKAGAT-FVMHCQPA 263 (302)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEcCHHHHCCCCEEEeeceEeCCCccccHHHHHhccCCcCCHHHHhcCCCC-eEECCCCC
Confidence 11 1 133346552 32246789999998733 1 1135777778888876 77777663
Q ss_pred --Ccccchhhh
Q psy15208 900 --DNEIEVEKL 908 (1027)
Q Consensus 900 --d~eid~~~l 908 (1027)
..||+-+.+
T Consensus 264 ~Rg~Ei~~~V~ 274 (302)
T PRK14805 264 HRGVEITSEVM 274 (302)
T ss_pred CCCCeeCHHHh
Confidence 467765533
|
|
| >PRK02255 putrescine carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.28 Score=56.55 Aligned_cols=131 Identities=15% Similarity=0.018 Sum_probs=85.9
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcC--ccccCCEEEEEcCC-hhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATD--VMIAGKIAVIIGYG-DVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~--~~l~Gk~VvViG~G-~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
..+||||--+ -.-| .-|++.|- +.+..+ -.+.|.+|+++|-+ ++.+..+..++.+|++|.++-+...
T Consensus 118 ~~vPVINa~~-~~~H-------PtQaLaDl~Ti~e~~g~g~~l~glkv~~vGD~~~v~~Sl~~~~~~~g~~v~~~~P~~~ 189 (338)
T PRK02255 118 ATVPVINGMS-DYNH-------PTQELGDLFTMIEHLPEGKKLEDCKVVFVGDATQVCVSLMFIATKMGMDFVHFGPKGY 189 (338)
T ss_pred CCCCEEECCC-CCCC-------hHHHHHHHHHHHHHhCCCCCCCCCEEEEECCCchHHHHHHHHHHhCCCEEEEECCCcc
Confidence 6799999533 2112 23555543 223222 24789999999985 4888989999999999998843311
Q ss_pred ----h-HHH----HhhcCc--E-EcCHHHHhccCCEEEecC-----CC-------------cccCcHHHHhcCCCCeEEE
Q psy15208 845 ----C-ALQ----AAMEGF--L-VVTMEYAKKYGDIFVTCT-----GN-------------YHVITHDHMRDMKDQAIVC 894 (1027)
Q Consensus 845 ----r-~~~----A~~~G~--~-v~~~~e~l~~aDvvi~at-----G~-------------~~vi~~~~~~~mk~gailv 894 (1027)
. ... +...|. . ..+++++++++|||++.+ +. .--++.+.++.+|+++++.
T Consensus 190 ~~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~w~~~~~~~~~~~~r~~~~~~~y~v~~ell~~a~~~~ivm 269 (338)
T PRK02255 190 QLPEEHLAIAEENCEVSGGSVLVTDDVDEAVKDADFVYTDVWYGLYDAELSEEERMAIFYPKYQVTPELMAKAGPHAKFM 269 (338)
T ss_pred ccCHHHHHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEEcccHhhccchhhHHHHHHhhCCCceECHHHHhccCCCCEEe
Confidence 1 111 223453 3 457899999999998722 11 1357778788889999998
Q ss_pred EecCC--Ccccchhhh
Q psy15208 895 NIGHF--DNEIEVEKL 908 (1027)
Q Consensus 895 NvG~~--d~eid~~~l 908 (1027)
..+.. ..||+-+.+
T Consensus 270 HpLP~~Rg~Eis~~V~ 285 (338)
T PRK02255 270 HCLPATRGEEVTDEVM 285 (338)
T ss_pred CCCCCcCCceecHHHh
Confidence 88873 567665533
|
|
| >PRK12562 ornithine carbamoyltransferase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.52 Score=54.20 Aligned_cols=122 Identities=13% Similarity=0.016 Sum_probs=79.9
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcC-ccccCCEEEEEcCC--hhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATD-VMIAGKIAVIIGYG--DVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~-~~l~Gk~VvViG~G--~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
..+||||.-+ ..-| .-|.+.|. +.+..+ -.+.|.+|+++|-+ .+.+..+..++.+|++|.++-+...
T Consensus 121 ~~vPVINa~~-~~~H-------PtQaLaDl~Ti~e~~g~~~l~gl~va~vGD~~~~v~~S~~~~~~~~G~~v~~~~P~~~ 192 (334)
T PRK12562 121 AGVPVWNGLT-NEFH-------PTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQAC 192 (334)
T ss_pred CCCCEEECCC-CCCC-------hHHHHHHHHHHHHHhCCCCcCCcEEEEECCCCCCHHHHHHHHHHHcCCEEEEECCccc
Confidence 6799998743 1111 23555443 222222 23789999999986 5889999999999999998743221
Q ss_pred ---h--H----HHHhhcCcE---EcCHHHHhccCCEEEecC----CC-------------cccCcHHHHhcC-CCCeEEE
Q psy15208 845 ---C--A----LQAAMEGFL---VVTMEYAKKYGDIFVTCT----GN-------------YHVITHDHMRDM-KDQAIVC 894 (1027)
Q Consensus 845 ---r--~----~~A~~~G~~---v~~~~e~l~~aDvvi~at----G~-------------~~vi~~~~~~~m-k~gailv 894 (1027)
. . ..+...|.. ..+++++++++|||.+.. |. .--++.+.++.. |+++++.
T Consensus 193 ~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~w~sm~~~~~~~~~~~~~~~~y~v~~ell~~a~~~~~i~m 272 (334)
T PRK12562 193 WPEASLVAECSALAQKHGGKITLTEDIAAGVKGADFIYTDVWVSMGEPKEKWAERIALLRGYQVNSKMMALTGNPQVKFL 272 (334)
T ss_pred CCcHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcCccccccchhhHHHHHHhccCCcCCHHHHHhhcCCCCEEE
Confidence 1 1 112334543 357999999999998743 21 124566767775 7889888
Q ss_pred EecCC
Q psy15208 895 NIGHF 899 (1027)
Q Consensus 895 NvG~~ 899 (1027)
.++..
T Consensus 273 HcLP~ 277 (334)
T PRK12562 273 HCLPA 277 (334)
T ss_pred CCCCC
Confidence 87765
|
|
| >PRK12491 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.012 Score=65.67 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=69.6
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCC----EEEEEcCCchhHHHHhh-cCcEEc-CHHHHhccCCEEEecCCCcccCc--HH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSA----QVWIIEIDPICALQAAM-EGFLVV-TMEYAKKYGDIFVTCTGNYHVIT--HD 882 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga----~ViV~d~dp~r~~~A~~-~G~~v~-~~~e~l~~aDvvi~atG~~~vi~--~~ 882 (1027)
+++++||+|.+|..++..+...|. +|+++|+++.++..+.. .|+.+. +..+++.++|+||.|+....+.. .+
T Consensus 3 ~~IgfIG~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavkP~~~~~vl~~ 82 (272)
T PRK12491 3 KQIGFIGCGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIKPDLYSSVINQ 82 (272)
T ss_pred CeEEEECccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeChHHHHHHHHH
Confidence 479999999999999999998774 69999998877665543 687644 56677889999999986433111 12
Q ss_pred HHhcCCCCeEEEEecCCCcccchhhhhc
Q psy15208 883 HMRDMKDQAIVCNIGHFDNEIEVEKLKK 910 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~d~eid~~~l~~ 910 (1027)
.-..++++.+++.+-.. ++++.+..
T Consensus 83 l~~~~~~~~lvISi~AG---i~i~~l~~ 107 (272)
T PRK12491 83 IKDQIKNDVIVVTIAAG---KSIKSTEN 107 (272)
T ss_pred HHHhhcCCcEEEEeCCC---CcHHHHHH
Confidence 12335678888888654 45555553
|
|
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0099 Score=69.02 Aligned_cols=87 Identities=15% Similarity=0.148 Sum_probs=65.5
Q ss_pred cccCCEEEEEcC-ChhHHHHHHHHHh-CCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcc---cCcH
Q psy15208 807 MIAGKIAVIIGY-GDVGKGSAQAMRA-LSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYH---VITH 881 (1027)
Q Consensus 807 ~l~Gk~VvViG~-G~IG~~vA~~a~~-~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~---vi~~ 881 (1027)
+++-.+|+|||. |-||..+|+.++. .|.+|+.+|++.. ...+.++.+.++|+||-|++... ++.
T Consensus 1 ~~~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~----------~~~~~~~~v~~aDlVilavPv~~~~~~l~- 69 (370)
T PRK08818 1 MIAQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADP----------GSLDPATLLQRADVLIFSAPIRHTAALIE- 69 (370)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCcc----------ccCCHHHHhcCCCEEEEeCCHHHHHHHHH-
Confidence 356789999999 9999999999996 4789999987421 12356778899999999997543 222
Q ss_pred HHHh---cCCCCeEEEEecCCCcccc
Q psy15208 882 DHMR---DMKDQAIVCNIGHFDNEIE 904 (1027)
Q Consensus 882 ~~~~---~mk~gailvNvG~~d~eid 904 (1027)
+... .+++++++..+|....++-
T Consensus 70 ~l~~~~~~l~~~~iVtDVgSvK~~i~ 95 (370)
T PRK08818 70 EYVALAGGRAAGQLWLDVTSIKQAPV 95 (370)
T ss_pred HHhhhhcCCCCCeEEEECCCCcHHHH
Confidence 1112 2799999999999876543
|
|
| >PRK10637 cysG siroheme synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0091 Score=71.49 Aligned_cols=92 Identities=15% Similarity=0.181 Sum_probs=65.9
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcC--CchhHHHHhhcCcEEcC---HHHHhccCCEEEecCCCcccCc
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEI--DPICALQAAMEGFLVVT---MEYAKKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~--dp~r~~~A~~~G~~v~~---~~e~l~~aDvvi~atG~~~vi~ 880 (1027)
+.+.||+|+|+|.|.++..=++.+..+||+|+|+-. ++.-...+....++... ..+.+..+++||.||+++. ++
T Consensus 8 ~~l~~~~vlvvGgG~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~-~n 86 (457)
T PRK10637 8 CQLRDRDCLLVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDA-VN 86 (457)
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCEEEEECCCCHH-Hh
Confidence 458999999999999999988999999999999833 22211112222233222 3455778999999998876 77
Q ss_pred HHHHhcCCCCeEEEEecC
Q psy15208 881 HDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~ 898 (1027)
.+..+..+..++++|+.-
T Consensus 87 ~~i~~~a~~~~~lvN~~d 104 (457)
T PRK10637 87 QRVSEAAEARRIFCNVVD 104 (457)
T ss_pred HHHHHHHHHcCcEEEECC
Confidence 776666677788888753
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.012 Score=66.02 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=70.3
Q ss_pred hhHHHHHhhh-cCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHh-hcCc-----EEcCHHHH--h
Q psy15208 794 ESLIDGIKRA-TDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAA-MEGF-----LVVTMEYA--K 863 (1027)
Q Consensus 794 ~s~~~~i~r~-t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~-~~G~-----~v~~~~e~--l 863 (1027)
.++...+.+. .+....|++|+|+|+|..+++++..|+..|+ +|+|+++++.|+.+.. ..+- ......+. .
T Consensus 109 ~G~~~~L~~~~~~~~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~ 188 (283)
T COG0169 109 IGFLRALKEFGLPVDVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGL 188 (283)
T ss_pred HHHHHHHHhcCCCcccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccccc
Confidence 5677777763 3356689999999999999999999999996 8999999998866532 2221 11222222 2
Q ss_pred ccCCEEEecCCCc--c-----cCcHHHHhcCCCCeEEEEecCC
Q psy15208 864 KYGDIFVTCTGNY--H-----VITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 864 ~~aDvvi~atG~~--~-----vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.++|+||+||+.- . .+. .+.++++.++..+=..
T Consensus 189 ~~~dliINaTp~Gm~~~~~~~~~~---~~~l~~~~~v~D~vY~ 228 (283)
T COG0169 189 EEADLLINATPVGMAGPEGDSPVP---AELLPKGAIVYDVVYN 228 (283)
T ss_pred cccCEEEECCCCCCCCCCCCCCCc---HHhcCcCCEEEEeccC
Confidence 2699999998421 1 222 4557778887766444
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.044 Score=65.11 Aligned_cols=107 Identities=21% Similarity=0.320 Sum_probs=68.2
Q ss_pred ccEEEEECCCCCCCCCCChH-HHHHHHHHHHh-CCcEEEEEcCCCCCCCCCC---------CCCccchHHHHHHHHHHHH
Q psy15208 33 KGVVLIAHPHPLFGGTMDNK-VVQTLVRVMLS-LGYISIRMNFRGVGASSGT---------YDSGNGETDDMEILLRYIQ 101 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~-~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~---------~~~~~~~~~Dv~avl~~L~ 101 (1027)
.|++|++-|= +..+.. ....+...|++ .|-.+++++.|-+|.|... +-+.+..+.|+..++++++
T Consensus 29 gpifl~~ggE----~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~ 104 (434)
T PF05577_consen 29 GPIFLYIGGE----GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVK 104 (434)
T ss_dssp SEEEEEE--S----S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC----CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHH
Confidence 6777777552 222211 11123333333 3778999999999999742 1234567999999999999
Q ss_pred HhC---CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 102 KKY---PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 102 ~~~---~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
.++ +..|++++|-|+||++|..+-.+||+ .+.|.++.++++.
T Consensus 105 ~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~--~~~ga~ASSapv~ 149 (434)
T PF05577_consen 105 KKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH--LFDGAWASSAPVQ 149 (434)
T ss_dssp HHTTTGCC--EEEEEETHHHHHHHHHHHH-TT--T-SEEEEET--CC
T ss_pred HhhcCCCCCCEEEECCcchhHHHHHHHhhCCC--eeEEEEeccceee
Confidence 765 34589999999999999999999999 7899999988764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.018 Score=65.73 Aligned_cols=99 Identities=25% Similarity=0.269 Sum_probs=75.9
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHHHh----hc-Cc---EEcCHHHHhccCCEEEecCCCc-c
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQAA----ME-GF---LVVTMEYAKKYGDIFVTCTGNY-H 877 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~A~----~~-G~---~v~~~~e~l~~aDvvi~atG~~-~ 877 (1027)
.-++++|||+|..++..++.++. ++. +|.|+++++..+.... .. +. .+.+.++++..||||++||.++ .
T Consensus 129 da~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~P 208 (330)
T COG2423 129 DASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEP 208 (330)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCC
Confidence 35899999999999999988886 555 7999999997655422 22 32 2456889999999999988654 5
Q ss_pred cCcHHHHhcCCCCeEEEEecCC---Ccccchhhhhc
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHF---DNEIEVEKLKK 910 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~---d~eid~~~l~~ 910 (1027)
++..+ ++|+|..+..+|.. ..|+|-+.+..
T Consensus 209 il~~~---~l~~G~hI~aiGad~p~k~Eld~e~l~r 241 (330)
T COG2423 209 VLKAE---WLKPGTHINAIGADAPGKRELDPEVLAR 241 (330)
T ss_pred eecHh---hcCCCcEEEecCCCCcccccCCHHHHHh
Confidence 66654 58899999999974 46888776653
|
|
| >PRK00676 hemA glutamyl-tRNA reductase; Validated | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.014 Score=66.68 Aligned_cols=88 Identities=11% Similarity=0.103 Sum_probs=59.4
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEec---CCCc-ccCcH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTC---TGNY-HVITH 881 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~a---tG~~-~vi~~ 881 (1027)
.+.||+|+|+|+|.+|+.+|+.|+..|+ +|+|+.+...+.... +. ....-+....+||||.| |+.+ .+++.
T Consensus 171 ~l~~k~vLvIGaGem~~l~a~~L~~~g~~~i~v~nRt~~~~~~~---~~-~~~~~~~~~~~DvVIs~t~~Tas~~p~i~~ 246 (338)
T PRK00676 171 KSKKASLLFIGYSEINRKVAYYLQRQGYSRITFCSRQQLTLPYR---TV-VREELSFQDPYDVIFFGSSESAYAFPHLSW 246 (338)
T ss_pred CccCCEEEEEcccHHHHHHHHHHHHcCCCEEEEEcCCccccchh---hh-hhhhhhcccCCCEEEEcCCcCCCCCceeeH
Confidence 4899999999999999999999999996 799998776321100 00 00011234579999986 4433 46777
Q ss_pred HHHhcCCCCeEEEEecCC
Q psy15208 882 DHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~ 899 (1027)
+.++..++- ++++.+.+
T Consensus 247 ~~~~~~~~r-~~iDLAvP 263 (338)
T PRK00676 247 ESLADIPDR-IVFDFNVP 263 (338)
T ss_pred HHHhhccCc-EEEEecCC
Confidence 776654432 66666664
|
|
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.017 Score=64.84 Aligned_cols=90 Identities=16% Similarity=0.083 Sum_probs=70.4
Q ss_pred cCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHH-------Hh--ccCCEEEecCCCcc
Q psy15208 809 AGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEY-------AK--KYGDIFVTCTGNYH 877 (1027)
Q Consensus 809 ~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e-------~l--~~aDvvi~atG~~~ 877 (1027)
.|.+|+|.|. |.+|..+++.++.+|++|++++.++.+...+...|.+ +.+..+ .. ...|+|++++|...
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~ 225 (325)
T cd05280 146 EDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDV 225 (325)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHH
Confidence 3579999998 9999999999999999999999888887777777764 222111 11 24799999998753
Q ss_pred cCcHHHHhcCCCCeEEEEecCCC
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d 900 (1027)
+ .+.++.|++++.++.+|..+
T Consensus 226 -~-~~~~~~l~~~g~~v~~g~~~ 246 (325)
T cd05280 226 -L-ANLLKQTKYGGVVASCGNAA 246 (325)
T ss_pred -H-HHHHHhhcCCCEEEEEecCC
Confidence 3 45689999999999999753
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0094 Score=69.78 Aligned_cols=91 Identities=19% Similarity=0.131 Sum_probs=70.5
Q ss_pred cccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHH------------------------
Q psy15208 807 MIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTME------------------------ 860 (1027)
Q Consensus 807 ~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~------------------------ 860 (1027)
...|.+|+|.|. |.+|+.+++.++.+|++|++++.++.+...+...|.+ +++.+
T Consensus 187 ~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (398)
T TIGR01751 187 VKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFK 266 (398)
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcch
Confidence 357899999998 9999999999999999988888777777777777753 22211
Q ss_pred -------HHh--ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 861 -------YAK--KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 861 -------e~l--~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+.. ...|+|++++|.. .+. ..++.+++++.++++|..
T Consensus 267 ~~~~~~~~~~~~~g~d~vld~~g~~-~~~-~~~~~l~~~G~~v~~g~~ 312 (398)
T TIGR01751 267 RFGKRIRELTGGEDPDIVFEHPGRA-TFP-TSVFVCRRGGMVVICGGT 312 (398)
T ss_pred hHHHHHHHHcCCCCceEEEECCcHH-HHH-HHHHhhccCCEEEEEccc
Confidence 111 2489999999864 344 458999999999999875
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.017 Score=65.02 Aligned_cols=49 Identities=18% Similarity=0.275 Sum_probs=40.8
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCc
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDP 843 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp 843 (1027)
.++...+.+. +..+.||+|+|+|.|.+|++++..+...|++ |+++++++
T Consensus 111 ~G~~~~l~~~-~~~~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 111 LGFVRNLREH-GVDVKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred HHHHHHHHhc-CCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 4566666543 3357899999999999999999999999995 99999986
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.025 Score=65.39 Aligned_cols=112 Identities=18% Similarity=0.138 Sum_probs=73.8
Q ss_pred CccEEEEECCCCCCCCCCCh--HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDN--KVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~--~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
..|+++++||+|-.-+.... ..+..+...|. ...++.+|+.-...-... ..+...+.++.+..++|.+..+...+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~-~~yPtQL~qlv~~Y~~Lv~~~G~~nI 197 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHG-HKYPTQLRQLVATYDYLVESEGNKNI 197 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCC-CcCchHHHHHHHHHHHHHhccCCCeE
Confidence 46999999996543333221 12223444443 458899998644300111 12334688888899999855566789
Q ss_pred EEEEechhHHHHHHHHHhcCC---cCCccEEEEEccCCCc
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDK---EISIKILILISVAVKK 146 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~---~~~V~gLVli~p~~~~ 146 (1027)
+|+|-|.||.+++.+...... ...++++|+++|....
T Consensus 198 ~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 198 ILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred EEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 999999999999887654322 1347999999997754
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.013 Score=68.62 Aligned_cols=88 Identities=14% Similarity=0.124 Sum_probs=62.8
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh----------------cCcEE---cCHHHHhccCCEEEec
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM----------------EGFLV---VTMEYAKKYGDIFVTC 872 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~----------------~G~~v---~~~~e~l~~aDvvi~a 872 (1027)
+|+|+|.|.+|..+|..++ .|-+|+++|+|+.+..+... .+... .+..+++.++|+||.|
T Consensus 2 kI~VIGlGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vii~ 80 (388)
T PRK15057 2 KITISGTGYVGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVIIA 80 (388)
T ss_pred EEEEECCCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEEEe
Confidence 6899999999999997776 59899999999977654332 12222 2356777899999999
Q ss_pred CCCc-----ccCc-----H--HHHhcCCCCeEEEEecCCC
Q psy15208 873 TGNY-----HVIT-----H--DHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 873 tG~~-----~vi~-----~--~~~~~mk~gailvNvG~~d 900 (1027)
++++ ...+ . +.+..+++|.++|+.+..+
T Consensus 81 Vpt~~~~k~~~~dl~~v~~v~~~i~~~~~g~lVV~~STv~ 120 (388)
T PRK15057 81 TPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVP 120 (388)
T ss_pred CCCCCccCCCCcChHHHHHHHHHHHhcCCCCEEEEeeecC
Confidence 8865 1111 1 1234478999999887764
|
|
| >cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.013 Score=66.85 Aligned_cols=92 Identities=20% Similarity=0.186 Sum_probs=71.5
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHH------HHh----c-cCCEEEecCCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTME------YAK----K-YGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~------e~l----~-~aDvvi~atG~ 875 (1027)
..|++|+|.|.|.+|+.+++.++.+|++|+++..++.+...+...|++ +.+.. +.+ . ..|++++++|.
T Consensus 164 ~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 243 (345)
T cd08260 164 KPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGI 243 (345)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCCCCCEEEEcCCC
Confidence 478999999999999999999999999999998887776666667763 33221 111 1 48999999986
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
...+. ..++.|++++.++++|..+
T Consensus 244 ~~~~~-~~~~~l~~~g~~i~~g~~~ 267 (345)
T cd08260 244 PETCR-NSVASLRKRGRHVQVGLTL 267 (345)
T ss_pred HHHHH-HHHHHhhcCCEEEEeCCcC
Confidence 54344 4588999999999999753
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty |
| >PRK13814 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.4 Score=54.66 Aligned_cols=130 Identities=18% Similarity=0.211 Sum_probs=85.5
Q ss_pred ccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcC---ChhHHHHHHHHHhCCC-EEEEEcCCch
Q psy15208 771 SFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGY---GDVGKGSAQAMRALSA-QVWIIEIDPI 844 (1027)
Q Consensus 771 ~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~---G~IG~~vA~~a~~~Ga-~ViV~d~dp~ 844 (1027)
.+||||.-++..-|. -|.+.|- +.+..| .+.|.+|+++|- +++.+..+..+..+|+ +|.++-+...
T Consensus 124 ~vPvINag~g~~~HP-------tQaLaDl~Ti~e~~g-~l~g~~va~vGD~~~~rv~~Sl~~~~a~~g~~~v~~~~P~~~ 195 (310)
T PRK13814 124 SGVVINAGDGNHQHP-------SQALIDLMTIKQHKP-HWNKLCVTIIGDIRHSRVANSLMDGLVTMGVPEIRLVGPSSL 195 (310)
T ss_pred CCCeEECCcCCCCCc-------hHHHHHHHHHHHHhC-CcCCcEEEEECCCCCCcHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 589998866543332 2444433 222334 478999999998 4899999999999999 8998843321
Q ss_pred hHHHHhhcCcE-EcCHHHHhccCCEEEecC-C--------------CcccCcHHHHhcCCCCeEEEEecCC--Ccccchh
Q psy15208 845 CALQAAMEGFL-VVTMEYAKKYGDIFVTCT-G--------------NYHVITHDHMRDMKDQAIVCNIGHF--DNEIEVE 906 (1027)
Q Consensus 845 r~~~A~~~G~~-v~~~~e~l~~aDvvi~at-G--------------~~~vi~~~~~~~mk~gailvNvG~~--d~eid~~ 906 (1027)
.........+. +.+++++++++|||.+.. + ..-.++.+.++.+|+++++.-++.. ..||+-+
T Consensus 196 ~p~~~~~~~~~~~~d~~ea~~~aDvvy~~~~~~er~~~~~~~~~~~~~y~v~~~~l~~a~~~~i~mHcLP~~Rg~Ei~~~ 275 (310)
T PRK13814 196 LPDKVGNDSIKKFTELKPSLLNSDVIVTLRLQKERHDNSVDIDAFRGSFRLTPEKLYSAKPDAIVMHPGPVNREVEINSD 275 (310)
T ss_pred CcCccccceEEEEcCHHHHhCCCCEEEECccccccccchhHHHHhCCCcccCHHHHHhcCCCCEEECCCCCCCCCeeCHH
Confidence 11111111244 357899999999998632 1 1135677778888999999877774 4566655
Q ss_pred hh
Q psy15208 907 KL 908 (1027)
Q Consensus 907 ~l 908 (1027)
.+
T Consensus 276 V~ 277 (310)
T PRK13814 276 VA 277 (310)
T ss_pred Hh
Confidence 33
|
|
| >cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.012 Score=66.35 Aligned_cols=92 Identities=17% Similarity=0.136 Sum_probs=70.7
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHH------HHhccCCEEEecCCCcccC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTME------YAKKYGDIFVTCTGNYHVI 879 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~------e~l~~aDvvi~atG~~~vi 879 (1027)
...|++|+|.|.|.+|+.+++.++.+|++|+++..++.+...+...|.+ +.... ......|+++++.+....+
T Consensus 160 ~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~ 239 (330)
T cd08245 160 PRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVTVVSGAAA 239 (330)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEEEECCCcHHHH
Confidence 3578999999999999999999999999999998888776666666654 22211 1123589999998766543
Q ss_pred cHHHHhcCCCCeEEEEecCC
Q psy15208 880 THDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~ 899 (1027)
.+.++.|+.++.++++|..
T Consensus 240 -~~~~~~l~~~G~~i~~~~~ 258 (330)
T cd08245 240 -EAALGGLRRGGRIVLVGLP 258 (330)
T ss_pred -HHHHHhcccCCEEEEECCC
Confidence 4568999999999999864
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an |
| >PRK07680 late competence protein ComER; Validated | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.015 Score=64.68 Aligned_cols=86 Identities=21% Similarity=0.255 Sum_probs=62.5
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC----EEEEEcCCchhHHHHhh-c-CcEE-cCHHHHhccCCEEEecCCCcc---cCcH
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSA----QVWIIEIDPICALQAAM-E-GFLV-VTMEYAKKYGDIFVTCTGNYH---VITH 881 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga----~ViV~d~dp~r~~~A~~-~-G~~v-~~~~e~l~~aDvvi~atG~~~---vi~~ 881 (1027)
+++|||+|.+|..++..+...|. +|+++++++.+...... . |+.+ .+..+++..+|+||.|+.... ++ +
T Consensus 2 ~I~iIG~G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~p~~~~~vl-~ 80 (273)
T PRK07680 2 NIGFIGTGNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVKPLDIYPLL-Q 80 (273)
T ss_pred EEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecCHHHHHHHH-H
Confidence 58999999999999999998883 79999999876554433 2 6664 467777889999999885332 22 1
Q ss_pred HHHhcCCCCeEEEEecC
Q psy15208 882 DHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~ 898 (1027)
+....++++.+++.+..
T Consensus 81 ~l~~~l~~~~~iis~~a 97 (273)
T PRK07680 81 KLAPHLTDEHCLVSITS 97 (273)
T ss_pred HHHhhcCCCCEEEEECC
Confidence 21234667788888764
|
|
| >cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.017 Score=66.00 Aligned_cols=91 Identities=21% Similarity=0.225 Sum_probs=71.2
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHHH----hc-cCCEEEecCCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEYA----KK-YGDIFVTCTGNY 876 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~----l~-~aDvvi~atG~~ 876 (1027)
.|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|.+ +.+ ..+. .. ..|++++++|..
T Consensus 175 ~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~ 254 (350)
T cd08240 175 ADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVNNS 254 (350)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHHHHHhCCCCcEEEECCCCH
Confidence 78999999999999999999999999 788998888777777777764 222 1111 12 479999999865
Q ss_pred ccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
..+. ..++.|++++.++.+|..+
T Consensus 255 ~~~~-~~~~~l~~~g~~v~~g~~~ 277 (350)
T cd08240 255 ATAS-LAFDILAKGGKLVLVGLFG 277 (350)
T ss_pred HHHH-HHHHHhhcCCeEEEECCCC
Confidence 5444 5589999999999998764
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy |
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.011 Score=71.06 Aligned_cols=89 Identities=9% Similarity=-0.060 Sum_probs=68.9
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc----CcE----EcCHHHHhcc---CCEEEecCCCcccCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME----GFL----VVTMEYAKKY---GDIFVTCTGNYHVIT 880 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~----G~~----v~~~~e~l~~---aDvvi~atG~~~vi~ 880 (1027)
+|++||.|..|..+|+.+...|-+|+|+|+++.+....... |.. ..++++++.. +|+|+++..+...++
T Consensus 8 ~IG~IGLG~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~~aV~ 87 (493)
T PLN02350 8 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAGAPVD 87 (493)
T ss_pred CEEEEeeHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCcHHHH
Confidence 69999999999999999999999999999998776543332 542 3467777765 999998876543222
Q ss_pred ---HHHHhcCCCCeEEEEecCCC
Q psy15208 881 ---HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 881 ---~~~~~~mk~gailvNvG~~d 900 (1027)
...+..|++|.++|+.|-..
T Consensus 88 ~Vi~gl~~~l~~G~iiID~sT~~ 110 (493)
T PLN02350 88 QTIKALSEYMEPGDCIIDGGNEW 110 (493)
T ss_pred HHHHHHHhhcCCCCEEEECCCCC
Confidence 24477899999999998763
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.013 Score=64.68 Aligned_cols=66 Identities=17% Similarity=0.124 Sum_probs=53.1
Q ss_pred CEEEEEcCChhHHHHHHHHHhCC---CEEEEEcCCchhHHHHhh-cCcEEc-CHHHHhccCCEEEecCCCc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALS---AQVWIIEIDPICALQAAM-EGFLVV-TMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~G---a~ViV~d~dp~r~~~A~~-~G~~v~-~~~e~l~~aDvvi~atG~~ 876 (1027)
.+++|||+|.+|..+|..+...| .+|.++++++.+...... .|+.+. +.++.+.++|+|+.|+...
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~~ 73 (267)
T PRK11880 3 KKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKPQ 73 (267)
T ss_pred CEEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCHH
Confidence 47999999999999999999888 689999999876655544 376643 5667788999999988654
|
|
| >PLN02702 L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.014 Score=67.30 Aligned_cols=91 Identities=21% Similarity=0.239 Sum_probs=70.9
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcEE-c-------CHHHHh--------ccCCEEE
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFLV-V-------TMEYAK--------KYGDIFV 870 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~v-~-------~~~e~l--------~~aDvvi 870 (1027)
..|++|+|.|.|.+|..+++.++.+|++ |++++.++.+...+...|++. . +..+.+ ...|+|+
T Consensus 180 ~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 259 (364)
T PLN02702 180 GPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSF 259 (364)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEE
Confidence 5799999999999999999999999995 788888887777777777642 1 111211 2479999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+++|+...+ .+.++.++++++++.+|..
T Consensus 260 d~~g~~~~~-~~~~~~l~~~G~~v~~g~~ 287 (364)
T PLN02702 260 DCVGFNKTM-STALEATRAGGKVCLVGMG 287 (364)
T ss_pred ECCCCHHHH-HHHHHHHhcCCEEEEEccC
Confidence 999865544 4568999999999999964
|
|
| >KOG3253|consensus | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.013 Score=69.76 Aligned_cols=139 Identities=13% Similarity=0.204 Sum_probs=91.1
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCC--cEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHH-------H
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLG--YISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQ-------K 102 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~G--y~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~-------~ 102 (1027)
..|+++++||.+. ....++ +++.|-..|.-.| ..+-.+|++.. ..+ .+...-++..+.+.+ .
T Consensus 175 ~spl~i~aps~p~-ap~tSd-~~~~wqs~lsl~gevvev~tfdl~n~--igG-----~nI~h~ae~~vSf~r~kvlei~g 245 (784)
T KOG3253|consen 175 ASPLAIKAPSTPL-APKTSD-RMWSWQSRLSLKGEVVEVPTFDLNNP--IGG-----ANIKHAAEYSVSFDRYKVLEITG 245 (784)
T ss_pred CCceEEeccCCCC-CCccch-HHHhHHHHHhhhceeeeeccccccCC--CCC-----cchHHHHHHHHHHhhhhhhhhhc
Confidence 4688999999762 222222 3445555554444 34566776521 111 122233333333332 3
Q ss_pred hCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc---------CCCCCCCCcEEEEEeCCCCCCChHHHH
Q psy15208 103 KYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK---------WLIPEVPKNTIIIHGELDEIIPLKDVF 173 (1027)
Q Consensus 103 ~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~---------~~l~~i~~PvLiIhG~~D~iVP~~~~~ 173 (1027)
.++..+++|+|+|||+.++..+.....+. .|+++|.++-+... ..+-.+..|+|++-|.+|..+++...+
T Consensus 246 efpha~IiLvGrsmGAlVachVSpsnsdv-~V~~vVCigypl~~vdgprgirDE~Lldmk~PVLFV~Gsnd~mcspn~ME 324 (784)
T KOG3253|consen 246 EFPHAPIILVGRSMGALVACHVSPSNSDV-EVDAVVCIGYPLDTVDGPRGIRDEALLDMKQPVLFVIGSNDHMCSPNSME 324 (784)
T ss_pred cCCCCceEEEecccCceeeEEeccccCCc-eEEEEEEecccccCCCcccCCcchhhHhcCCceEEEecCCcccCCHHHHH
Confidence 57788999999999999988888766543 38999999854321 135567899999999999999999988
Q ss_pred hhhCCCC
Q psy15208 174 LWANPLD 180 (1027)
Q Consensus 174 ~l~~~~~ 180 (1027)
...++..
T Consensus 325 ~vreKMq 331 (784)
T KOG3253|consen 325 EVREKMQ 331 (784)
T ss_pred HHHHHhh
Confidence 7777654
|
|
| >cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.019 Score=64.01 Aligned_cols=91 Identities=23% Similarity=0.177 Sum_probs=70.5
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcC-----HHHHh------ccCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVT-----MEYAK------KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l------~~aDvvi~atG 874 (1027)
..|.+|+|.|.|.+|..+++.++.+|++ |+++..++.+...+...|++ +.+ ..+.+ ...|+++++.|
T Consensus 128 ~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g 207 (312)
T cd08269 128 RAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVG 207 (312)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 5799999999999999999999999998 99988877676666667764 221 22221 24799999987
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
....+. ..++.|++++.++++|..
T Consensus 208 ~~~~~~-~~~~~l~~~g~~~~~g~~ 231 (312)
T cd08269 208 HQWPLD-LAGELVAERGRLVIFGYH 231 (312)
T ss_pred CHHHHH-HHHHHhccCCEEEEEccC
Confidence 665334 458899999999999865
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.0087 Score=64.23 Aligned_cols=94 Identities=13% Similarity=0.139 Sum_probs=67.8
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH--HhhcCcEEcC---HHHHhccCCEEEecCCCcccCc
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ--AAMEGFLVVT---MEYAKKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~--A~~~G~~v~~---~~e~l~~aDvvi~atG~~~vi~ 880 (1027)
..+.||+|+|+|.|.+|..=|+.+...||+|+|+-.+...... +...+..... ..+.+..+++||.||++.. ++
T Consensus 8 ~~l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d~~-ln 86 (210)
T COG1648 8 LDLEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDDEE-LN 86 (210)
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCCHH-HH
Confidence 4589999999999999999999999999999998544411221 1122211111 1122345999999998876 78
Q ss_pred HHHHhcCCCCeEEEEecCCC
Q psy15208 881 HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d 900 (1027)
++.+...+.-.+++|+..-+
T Consensus 87 ~~i~~~a~~~~i~vNv~D~p 106 (210)
T COG1648 87 ERIAKAARERRILVNVVDDP 106 (210)
T ss_pred HHHHHHHHHhCCceeccCCc
Confidence 88888888889999996643
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.016 Score=64.99 Aligned_cols=80 Identities=21% Similarity=0.169 Sum_probs=57.6
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHh-hc----Cc---EEcCH---HH
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAA-ME----GF---LVVTM---EY 861 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~-~~----G~---~v~~~---~e 861 (1027)
.++..++.+. ...+.||+|+|+|+|..+|+++..|...|+ +|+++++++.++..-. .. +. ...+. .+
T Consensus 112 ~Gf~~~L~~~-~~~~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~ 190 (283)
T PRK14027 112 SGFGRGMEEG-LPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIED 190 (283)
T ss_pred HHHHHHHHhc-CcCcCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHH
Confidence 5677776542 224679999999999999999999999998 7999999987765422 11 11 22222 23
Q ss_pred HhccCCEEEecCC
Q psy15208 862 AKKYGDIFVTCTG 874 (1027)
Q Consensus 862 ~l~~aDvvi~atG 874 (1027)
.+..+|+||+||.
T Consensus 191 ~~~~~divINaTp 203 (283)
T PRK14027 191 VIAAADGVVNATP 203 (283)
T ss_pred HHhhcCEEEEcCC
Confidence 4567899999884
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.017 Score=68.29 Aligned_cols=89 Identities=18% Similarity=0.172 Sum_probs=63.5
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCc-EEc--CHHHH---------------hccCCEEEec
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGF-LVV--TMEYA---------------KKYGDIFVTC 872 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~-~v~--~~~e~---------------l~~aDvvi~a 872 (1027)
++|+|+|.|.+|..+|..++..|-+|+++|+++.+... ...|. .+. .+++. +..+|+||.|
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~~V~~~D~~~~~v~~-l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~ 82 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDT-INRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLIA 82 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCCEEEEEeCCHHHHHH-HHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEEE
Confidence 68999999999999999999999999999999976654 22221 110 12222 3379999999
Q ss_pred CCCc----------ccC--cHHHHhcCCCCeEEEEecCCC
Q psy15208 873 TGNY----------HVI--THDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 873 tG~~----------~vi--~~~~~~~mk~gailvNvG~~d 900 (1027)
.+++ .+. .......+++|.++|+.+..+
T Consensus 83 vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~ 122 (415)
T PRK11064 83 VPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSP 122 (415)
T ss_pred cCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 8874 221 122345689999999987753
|
|
| >PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.009 Score=73.40 Aligned_cols=70 Identities=24% Similarity=0.214 Sum_probs=52.7
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc---------------------hhHHHHhhcCcEEc-C-------
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP---------------------ICALQAAMEGFLVV-T------- 858 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp---------------------~r~~~A~~~G~~v~-~------- 858 (1027)
..|++|+|+|.|++|..+|..|+..|++|+++|..+ .+...+...|+++. +
T Consensus 135 ~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~~~ 214 (564)
T PRK12771 135 DTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGEDI 214 (564)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECCcC
Confidence 479999999999999999999999999999998532 23345667787532 1
Q ss_pred -HHHHhccCCEEEecCCCcc
Q psy15208 859 -MEYAKKYGDIFVTCTGNYH 877 (1027)
Q Consensus 859 -~~e~l~~aDvvi~atG~~~ 877 (1027)
.++.....|+||.++|...
T Consensus 215 ~~~~~~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 215 TLEQLEGEFDAVFVAIGAQL 234 (564)
T ss_pred CHHHHHhhCCEEEEeeCCCC
Confidence 2222235799999998653
|
|
| >cd08252 AL_MDR Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.017 Score=65.29 Aligned_cols=90 Identities=21% Similarity=0.160 Sum_probs=69.7
Q ss_pred CCEEEEEc-CChhHHHHHHHHHhCC-CEEEEEcCCchhHHHHhhcCcE-EcC----HHHHh-----ccCCEEEecCCCcc
Q psy15208 810 GKIAVIIG-YGDVGKGSAQAMRALS-AQVWIIEIDPICALQAAMEGFL-VVT----MEYAK-----KYGDIFVTCTGNYH 877 (1027)
Q Consensus 810 Gk~VvViG-~G~IG~~vA~~a~~~G-a~ViV~d~dp~r~~~A~~~G~~-v~~----~~e~l-----~~aDvvi~atG~~~ 877 (1027)
|++|+|.| .|.+|+.+++.++.+| ++|++++.++.+...+...|++ +++ ..+.+ ...|++++++|...
T Consensus 150 g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~~~~~~ 229 (336)
T cd08252 150 GKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQ 229 (336)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCccHHHHHHhhCCCCCCEEEEccCcHH
Confidence 89999999 5999999999999999 9999998888777777767763 221 11111 24799999998654
Q ss_pred cCcHHHHhcCCCCeEEEEecCCC
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d 900 (1027)
.+. ..++.|++++.++++|..+
T Consensus 230 ~~~-~~~~~l~~~g~~v~~g~~~ 251 (336)
T cd08252 230 HWD-AMAELIAPQGHICLIVDPQ 251 (336)
T ss_pred HHH-HHHHHhcCCCEEEEecCCC
Confidence 444 5589999999999998653
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil |
| >COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.0078 Score=66.71 Aligned_cols=93 Identities=18% Similarity=0.217 Sum_probs=74.2
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc---------------C----------HHH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV---------------T----------MEY 861 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~---------------~----------~~e 861 (1027)
..++.+|+++|.|-+|...+..++..|+-|+..|+.|.+..+-...|.+.. + +.+
T Consensus 161 tv~pA~vlv~G~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~ 240 (356)
T COG3288 161 TVSPAKVLVIGAGVAGLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE 240 (356)
T ss_pred cccchhhhhhhHHHHHHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence 467789999999999999999999999999999999988777555554322 2 123
Q ss_pred HhccCCEEEecC---C--CcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 862 AKKYGDIFVTCT---G--NYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 862 ~l~~aDvvi~at---G--~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.+++.|||||+. | .+.++++++++.||+|.++++....
T Consensus 241 ~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~ 283 (356)
T COG3288 241 QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAE 283 (356)
T ss_pred HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhh
Confidence 345689999864 3 4578999999999999999987653
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.033 Score=62.49 Aligned_cols=106 Identities=13% Similarity=0.035 Sum_probs=69.2
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-CCcE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL-GYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYP-YLPI 109 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~-Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~-~~pv 109 (1027)
+.| ||+.||.+...++. .+..+.+.+... |+-+..+- -|-+...+. +..+-+.++.+.+.+..... ..-+
T Consensus 26 ~~P-vViwHGlgD~~~~~---~~~~~~~~i~~~~~~pg~~v~-ig~~~~~s~---~~~~~~Qv~~vce~l~~~~~L~~G~ 97 (306)
T PLN02606 26 SVP-FVLFHGFGGECSNG---KVSNLTQFLINHSGYPGTCVE-IGNGVQDSL---FMPLRQQASIACEKIKQMKELSEGY 97 (306)
T ss_pred CCC-EEEECCCCcccCCc---hHHHHHHHHHhCCCCCeEEEE-ECCCccccc---ccCHHHHHHHHHHHHhcchhhcCce
Confidence 344 58889997544432 466777777522 66555554 233332222 13456667777777765211 1249
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
.++|+|+||.+.-.++.+.|+.+.|+-+|.++++..
T Consensus 98 naIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 98 NIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 999999999999999999987557999999987643
|
|
| >cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.11 Score=57.17 Aligned_cols=122 Identities=16% Similarity=0.184 Sum_probs=86.0
Q ss_pred hhhhhhHHHHHh---hhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-----------EEEEEcCC-----------ch
Q psy15208 790 YGCRESLIDGIK---RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-----------QVWIIEID-----------PI 844 (1027)
Q Consensus 790 ~g~~~s~~~~i~---r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-----------~ViV~d~d-----------p~ 844 (1027)
.||+--...++. +.++..+...+++++|+|.-|.++|+.+...++ ++.++|.. +.
T Consensus 2 qGTaaV~lAgllnAlk~~g~~l~d~riv~~GAGsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~ 81 (254)
T cd00762 2 QGTASVAVAGLLAALKVTKKKISEHKVLFNGAGAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPN 81 (254)
T ss_pred chhHHHHHHHHHHHHHHhCCChhhcEEEEECcCHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHH
Confidence 355554444433 355777899999999999999999999988876 57777654 22
Q ss_pred hHHH--HhhcCcEEcCHHHHhc--cCCEEEecCCCcccCcHHHHhcCC---CCeEEEEecCCCc--ccchhhhhcc
Q psy15208 845 CALQ--AAMEGFLVVTMEYAKK--YGDIFVTCTGNYHVITHDHMRDMK---DQAIVCNIGHFDN--EIEVEKLKKY 911 (1027)
Q Consensus 845 r~~~--A~~~G~~v~~~~e~l~--~aDvvi~atG~~~vi~~~~~~~mk---~gailvNvG~~d~--eid~~~l~~~ 911 (1027)
+... .....-+..++.++++ ..|++|-+++..++++++.++.|. +.-++.-..-... |+..+...++
T Consensus 82 ~~~~~~~~~~~~~~~~L~eav~~~kptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~tpe~a~~~ 157 (254)
T cd00762 82 EYHLARFANPERESGDLEDAVEAAKPDFLIGVSRVGGAFTPEVIRAXAEINERPVIFALSNPTSKAECTAEEAYTA 157 (254)
T ss_pred HHHHHHHcCcccccCCHHHHHHhhCCCEEEEeCCCCCCCCHHHHHHHhhcCCCCEEEECCCcCCccccCHHHHHhh
Confidence 2221 1122223458999998 899999999888999999999998 6666655544433 7776655444
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.028 Score=59.97 Aligned_cols=93 Identities=15% Similarity=0.196 Sum_probs=63.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchh---HH--------------HH-------hhcCcEEc----
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPIC---AL--------------QA-------AMEGFLVV---- 857 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r---~~--------------~A-------~~~G~~v~---- 857 (1027)
.|..++|+|+|+|.+|..+|..+...|. +|+++|.|... +. ++ .....++.
T Consensus 18 ~L~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~ 97 (200)
T TIGR02354 18 KLEQATVAICGLGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE 97 (200)
T ss_pred HHhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence 4788999999999999999999999999 79999988211 00 00 00111211
Q ss_pred -----CHHHHhccCCEEEecCCCc---ccCcHHHHhcCCCCeEEEEecCC
Q psy15208 858 -----TMEYAKKYGDIFVTCTGNY---HVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 858 -----~~~e~l~~aDvvi~atG~~---~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
++++.+..+|+||+|+.+. ..+.++....++...++...|..
T Consensus 98 ~i~~~~~~~~~~~~DlVi~a~Dn~~~k~~l~~~~~~~~~~~~ii~~~g~~ 147 (200)
T TIGR02354 98 KITEENIDKFFKDADIVCEAFDNAEAKAMLVNAVLEKYKDKYLIAASGLA 147 (200)
T ss_pred eCCHhHHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHcCCCcEEEEeccc
Confidence 1344567799999998763 34455555667777777765554
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.03 Score=60.85 Aligned_cols=108 Identities=17% Similarity=0.247 Sum_probs=72.1
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCC-----cEEEEEcCCCCCCCCCC------C-----------CCccch
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLG-----YISIRMNFRGVGASSGT------Y-----------DSGNGE 89 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~G-----y~Vla~DlrGhG~S~g~------~-----------~~~~~~ 89 (1027)
+-|+ +|+||. +|+.+ .+..++..|...+ --++.+|--|.=.-.|. + .+....
T Consensus 45 ~iPT-IfIhGs---gG~as--S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~ 118 (288)
T COG4814 45 AIPT-IFIHGS---GGTAS--SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQ 118 (288)
T ss_pred ccce-EEEecC---CCChh--HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhH
Confidence 3455 999997 44432 3566777777654 23566666652111111 1 112234
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCc---CCccEEEEEccCCC
Q psy15208 90 TDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKE---ISIKILILISVAVK 145 (1027)
Q Consensus 90 ~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~---~~V~gLVli~p~~~ 145 (1027)
..=+..++.+|..+|....+-++||||||.-...++..+... +.+..+|.++.+..
T Consensus 119 s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 119 SKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 555678889999999998999999999999999999877542 34788998887654
|
|
| >cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.016 Score=65.52 Aligned_cols=91 Identities=15% Similarity=0.054 Sum_probs=71.1
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHH-HhccCCEEEecCCCcccCcHHHH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEY-AKKYGDIFVTCTGNYHVITHDHM 884 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e-~l~~aDvvi~atG~~~vi~~~~~ 884 (1027)
...|.+|+|.|.|.+|+.+++.++..|++|+++..++.+...+...|++ +.+..+ .-...|+++++++.... -.+.+
T Consensus 165 ~~~~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~vD~vi~~~~~~~~-~~~~~ 243 (329)
T cd08298 165 LKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDLPPEPLDAAIIFAPVGAL-VPAAL 243 (329)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCccCCCcccEEEEcCCcHHH-HHHHH
Confidence 3578999999999999999999999999999998877777777777874 232222 11347999988776553 44568
Q ss_pred hcCCCCeEEEEecC
Q psy15208 885 RDMKDQAIVCNIGH 898 (1027)
Q Consensus 885 ~~mk~gailvNvG~ 898 (1027)
+.|++++.++..|.
T Consensus 244 ~~l~~~G~~v~~g~ 257 (329)
T cd08298 244 RAVKKGGRVVLAGI 257 (329)
T ss_pred HHhhcCCEEEEEcC
Confidence 99999999998884
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.016 Score=67.92 Aligned_cols=85 Identities=21% Similarity=0.253 Sum_probs=62.7
Q ss_pred HHHHHHHHHHhCCcEE----E--EEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHH
Q psy15208 53 VVQTLVRVMLSLGYIS----I--RMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQK 126 (1027)
Q Consensus 53 ~~~~la~~La~~Gy~V----l--a~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~ 126 (1027)
.|..+++.|.+.||.. + -+|+|- |. .........+...++.+.... ..+++|+||||||.++..+..
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~---~~---~~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~ 138 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL---SP---AERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQ 138 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh---ch---hhHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHH
Confidence 5888999999988742 2 267762 11 112345677777777777665 679999999999999999988
Q ss_pred hcCCc----CCccEEEEEccCC
Q psy15208 127 RLDKE----ISIKILILISVAV 144 (1027)
Q Consensus 127 ~~p~~----~~V~gLVli~p~~ 144 (1027)
..+.. ..|+++|.++++.
T Consensus 139 ~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 139 WMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred hccchhhHHhhhhEEEEeCCCC
Confidence 87643 2599999999764
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.057 Score=61.03 Aligned_cols=119 Identities=16% Similarity=0.142 Sum_probs=77.4
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCchhH-----HHHhhcCcEEc-CHHHHhccCCEEEecCCCcccCc---HHHHhcCCCCe
Q psy15208 821 VGKGSAQAMRALSAQVWIIEIDPICA-----LQAAMEGFLVV-TMEYAKKYGDIFVTCTGNYHVIT---HDHMRDMKDQA 891 (1027)
Q Consensus 821 IG~~vA~~a~~~Ga~ViV~d~dp~r~-----~~A~~~G~~v~-~~~e~l~~aDvvi~atG~~~vi~---~~~~~~mk~ga 891 (1027)
.|+++|+.|...|-.|+|+|+++.+. ......|+.+. +..++++++|+||++.++...+. ...++.+++|.
T Consensus 31 gGspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~LPd~aaV~eVl~GLaa~L~~Ga 110 (341)
T TIGR01724 31 GGSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFTPFGKGTFSIARTIIEHVPENA 110 (341)
T ss_pred CHHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEecCCHHHHHHHHHHHHhcCCCCC
Confidence 69999999999999999999887533 23556688755 58899999999999987654221 23577899999
Q ss_pred EEEEecCCCcccchhhhhc-cceeccccceeeee---cCC--CcEEEEecCCcc
Q psy15208 892 IVCNIGHFDNEIEVEKLKK-YKWENIKPQVDHII---FPD--GKKIILLAEGRL 939 (1027)
Q Consensus 892 ilvNvG~~d~eid~~~l~~-~~~~~~~~~v~~y~---~~d--g~~i~LLa~Grl 939 (1027)
++|+++..+.+.-...+.. ++...-...++.|. .|. ++..|+++.+..
T Consensus 111 IVID~STIsP~t~~~~~e~~l~~~r~d~~v~s~HP~~vP~~~~~~~~~~~~~~~ 164 (341)
T TIGR01724 111 VICNTCTVSPVVLYYSLEKILRLKRTDVGISSMHPAAVPGTPQHGHYVIGGKPT 164 (341)
T ss_pred EEEECCCCCHHHHHHHHHHHhhcCccccCeeccCCCCCCCCCCCceeeeccccc
Confidence 9999987643222222221 11111122333333 222 667778776653
|
This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown. |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.025 Score=63.73 Aligned_cols=80 Identities=21% Similarity=0.191 Sum_probs=56.4
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCch---hHHH-HhhcC------cEEcCHH--
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPI---CALQ-AAMEG------FLVVTME-- 860 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~---r~~~-A~~~G------~~v~~~~-- 860 (1027)
.++..++.+. +..+.||+|+|+|+|..+++++..+...|+ +|+|+++++. ++.. +...+ ..+.+++
T Consensus 109 ~Gf~~~l~~~-~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~ 187 (288)
T PRK12749 109 TGHIRAIKES-GFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQ 187 (288)
T ss_pred HHHHHHHHhc-CCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhh
Confidence 5666666543 556799999999999999999999999998 8999999853 3322 22111 2233332
Q ss_pred ----HHhccCCEEEecCC
Q psy15208 861 ----YAKKYGDIFVTCTG 874 (1027)
Q Consensus 861 ----e~l~~aDvvi~atG 874 (1027)
+.+.++|+||+||.
T Consensus 188 ~~l~~~~~~aDivINaTp 205 (288)
T PRK12749 188 QAFAEALASADILTNGTK 205 (288)
T ss_pred hhhhhhcccCCEEEECCC
Confidence 24557899999884
|
|
| >TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.019 Score=64.61 Aligned_cols=90 Identities=16% Similarity=0.056 Sum_probs=68.8
Q ss_pred ccCC-EEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHH---HH---h--ccCCEEEecCCCc
Q psy15208 808 IAGK-IAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTME---YA---K--KYGDIFVTCTGNY 876 (1027)
Q Consensus 808 l~Gk-~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~---e~---l--~~aDvvi~atG~~ 876 (1027)
..|. +|+|.|. |.+|..+++.++.+|++|+++..++.+...+...|++ +.+.. .. + ...|++++++|+.
T Consensus 143 ~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~ 222 (323)
T TIGR02823 143 TPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGH 222 (323)
T ss_pred CCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEECccHH
Confidence 4677 9999998 9999999999999999988876666666666666763 22211 11 1 1369999999876
Q ss_pred ccCcHHHHhcCCCCeEEEEecCC
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
. + .+.++.+++++.++++|..
T Consensus 223 ~-~-~~~~~~l~~~G~~v~~g~~ 243 (323)
T TIGR02823 223 T-L-ANVLAQLKYGGAVAACGLA 243 (323)
T ss_pred H-H-HHHHHHhCCCCEEEEEccc
Confidence 3 3 4568999999999999975
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc. |
| >PTZ00317 NADP-dependent malic enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.11 Score=62.83 Aligned_cols=125 Identities=16% Similarity=0.202 Sum_probs=88.1
Q ss_pred cccchhhhhhHHHHHhh---hcCccccCCEEEEEcCChhHHHHHHHHHh----CCC-------EEEEEcCC---------
Q psy15208 786 FDNLYGCRESLIDGIKR---ATDVMIAGKIAVIIGYGDVGKGSAQAMRA----LSA-------QVWIIEID--------- 842 (1027)
Q Consensus 786 ~dn~~g~~~s~~~~i~r---~t~~~l~Gk~VvViG~G~IG~~vA~~a~~----~Ga-------~ViV~d~d--------- 842 (1027)
.|...||+-....++.. .++..+...+++++|+|.-|.++|+.+.. .|. ++.++|..
T Consensus 270 nDDiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~ 349 (559)
T PTZ00317 270 NDDIQGTGAVIAAGFLNALKLSGVPPEEQRIVFFGAGSAAIGVANNIADLAAEYGVTREEALKSFYLVDSKGLVTTTRGD 349 (559)
T ss_pred cccchhHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCc
Confidence 46678988876666543 55777899999999999999999988873 677 78877643
Q ss_pred ---chhHHHHhhcC-cE---EcCHHHHhccC--CEEEecCCCcccCcHHHHhcCCC---CeEEEEecCCC--cccchhhh
Q psy15208 843 ---PICALQAAMEG-FL---VVTMEYAKKYG--DIFVTCTGNYHVITHDHMRDMKD---QAIVCNIGHFD--NEIEVEKL 908 (1027)
Q Consensus 843 ---p~r~~~A~~~G-~~---v~~~~e~l~~a--Dvvi~atG~~~vi~~~~~~~mk~---gailvNvG~~d--~eid~~~l 908 (1027)
+.+...|.... .. ..++.|+++.+ |++|-+++..++++++.++.|.. .-++.-.+-.. .|+..+..
T Consensus 350 ~l~~~k~~fa~~~~~~~~~~~~~L~e~v~~~KPtvLIG~S~~~g~Ft~evv~~Ma~~~~rPIIFaLSNPt~~aE~tpeda 429 (559)
T PTZ00317 350 KLAKHKVPFARTDISAEDSSLKTLEDVVRFVKPTALLGLSGVGGVFTEEVVKTMASNVERPIIFPLSNPTSKAECTAEDA 429 (559)
T ss_pred cccHHHHHHhccccccccccCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCCCCCCcCHHHH
Confidence 22333344321 11 45899999887 99999998888999999999974 55554443332 36665544
Q ss_pred hc
Q psy15208 909 KK 910 (1027)
Q Consensus 909 ~~ 910 (1027)
..
T Consensus 430 ~~ 431 (559)
T PTZ00317 430 YK 431 (559)
T ss_pred Hh
Confidence 33
|
|
| >cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.013 Score=67.60 Aligned_cols=91 Identities=19% Similarity=0.234 Sum_probs=69.9
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcC-----HHH----Hh--ccCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVT-----MEY----AK--KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~-----~~e----~l--~~aDvvi~atG 874 (1027)
..|++|+|.|.|.+|+.+++.++.+|++ |++++.++.+...+...|.+ +.+ ..+ .. ...|+|++++|
T Consensus 186 ~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg 265 (367)
T cd08263 186 RPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALG 265 (367)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCC
Confidence 4789999999999999999999999998 88888877776666666763 322 111 11 23799999998
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
....+ .+.++.|++++.++.+|..
T Consensus 266 ~~~~~-~~~~~~l~~~G~~v~~g~~ 289 (367)
T cd08263 266 KPETF-KLALDVVRDGGRAVVVGLA 289 (367)
T ss_pred CHHHH-HHHHHHHhcCCEEEEEccC
Confidence 76333 4568999999999999864
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu |
| >TIGR00692 tdh L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.021 Score=65.01 Aligned_cols=91 Identities=20% Similarity=0.223 Sum_probs=71.3
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcC-----HHH----Hh--ccCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVT-----MEY----AK--KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~-----~~e----~l--~~aDvvi~atG 874 (1027)
..|++|+|.|.|.+|..+++.++.+|++ |++++.++.+...+...|.+ +.+ ..+ .. ...|+++++.|
T Consensus 160 ~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g 239 (340)
T TIGR00692 160 ISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSG 239 (340)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCC
Confidence 5799999999999999999999999996 88898888777777777764 222 111 11 24799999988
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
....+. +.++.|++++.++.+|..
T Consensus 240 ~~~~~~-~~~~~l~~~g~~v~~g~~ 263 (340)
T TIGR00692 240 APKALE-QGLQAVTPGGRVSLLGLP 263 (340)
T ss_pred CHHHHH-HHHHhhcCCCEEEEEccC
Confidence 665444 558889999999999875
|
E. coli His-90 modulates substrate specificity and is believed part of the active site. |
| >cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.015 Score=67.07 Aligned_cols=93 Identities=18% Similarity=0.171 Sum_probs=70.3
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcC-----HHH----Hh--ccCCEEEecC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVT-----MEY----AK--KYGDIFVTCT 873 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~-----~~e----~l--~~aDvvi~at 873 (1027)
...|++|+|.|.|.+|..+++.++.+|++ |++++.++.+...+...|++ +++ ..+ .. ...|++++++
T Consensus 180 ~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~ 259 (363)
T cd08279 180 VRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAV 259 (363)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCccHHHHHHHHcCCCCCCEEEEcC
Confidence 35789999999999999999999999996 88888877776666666653 222 111 11 2379999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
|....+. +.++.++++++++.+|..+
T Consensus 260 ~~~~~~~-~~~~~l~~~G~~v~~g~~~ 285 (363)
T cd08279 260 GRAATIR-QALAMTRKGGTAVVVGMGP 285 (363)
T ss_pred CChHHHH-HHHHHhhcCCeEEEEecCC
Confidence 8654333 5588899999999998653
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me |
| >PRK05396 tdh L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.02 Score=65.12 Aligned_cols=93 Identities=17% Similarity=0.206 Sum_probs=71.3
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh------ccCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEYAK------KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l------~~aDvvi~atG 874 (1027)
..|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|.+ +.+ ..+.+ ...|+|+++.|
T Consensus 162 ~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 241 (341)
T PRK05396 162 LVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSG 241 (341)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCCCEEEECCC
Confidence 479999999999999999999999999 688887777666666667764 222 11221 24899999988
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
....+. ..++.+++++.+++.|..+.
T Consensus 242 ~~~~~~-~~~~~l~~~G~~v~~g~~~~ 267 (341)
T PRK05396 242 APSAFR-QMLDNMNHGGRIAMLGIPPG 267 (341)
T ss_pred CHHHHH-HHHHHHhcCCEEEEEecCCC
Confidence 765444 45888999999999998653
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.023 Score=69.25 Aligned_cols=81 Identities=26% Similarity=0.261 Sum_probs=56.4
Q ss_pred hhHHHHHhhh---------cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH-hhcCcEEcCHHHH-
Q psy15208 794 ESLIDGIKRA---------TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA-AMEGFLVVTMEYA- 862 (1027)
Q Consensus 794 ~s~~~~i~r~---------t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A-~~~G~~v~~~~e~- 862 (1027)
.+++.++.+. .+..+.+|+|+|+|.|.+|++++..|+..|++|+++++++.++... ...+....+.++.
T Consensus 354 ~G~~~~l~~~~~~~~~~~~~~~~~~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~~~~~~~~~ 433 (529)
T PLN02520 354 IGAISAIEDGLRASGSSPASGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQALTLADLE 433 (529)
T ss_pred HHHHHHHHhhhcccccccccccCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceeeHhHhh
Confidence 4566666532 1345789999999999999999999999999999999987665542 2333333333322
Q ss_pred --h-ccCCEEEecCC
Q psy15208 863 --K-KYGDIFVTCTG 874 (1027)
Q Consensus 863 --l-~~aDvvi~atG 874 (1027)
. ..+|+||+||+
T Consensus 434 ~~~~~~~diiINtT~ 448 (529)
T PLN02520 434 NFHPEEGMILANTTS 448 (529)
T ss_pred hhccccCeEEEeccc
Confidence 2 34688887763
|
|
| >cd05285 sorbitol_DH Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.018 Score=65.61 Aligned_cols=93 Identities=23% Similarity=0.291 Sum_probs=70.8
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcCH------------HHHhc--cCCEEE
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVTM------------EYAKK--YGDIFV 870 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~~------------~e~l~--~aDvvi 870 (1027)
...|++|+|.|.|.+|..+++.|+.+|++ |+++..++.+...+...|.+ +.+. .+... ..|+|+
T Consensus 160 ~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vl 239 (343)
T cd05285 160 VRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVI 239 (343)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEE
Confidence 36799999999999999999999999997 88888877776666666664 2211 11222 379999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
++.|....+ ...++.|++++.++.+|..+
T Consensus 240 d~~g~~~~~-~~~~~~l~~~G~~v~~g~~~ 268 (343)
T cd05285 240 ECTGAESCI-QTAIYATRPGGTVVLVGMGK 268 (343)
T ss_pred ECCCCHHHH-HHHHHHhhcCCEEEEEccCC
Confidence 999875433 35589999999999998654
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.029 Score=62.99 Aligned_cols=91 Identities=15% Similarity=0.096 Sum_probs=67.2
Q ss_pred cccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHH----Hh--ccCCEEEecC
Q psy15208 807 MIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEY----AK--KYGDIFVTCT 873 (1027)
Q Consensus 807 ~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e----~l--~~aDvvi~at 873 (1027)
...|.+|+|.|. |.+|+.+++.++.+|++|+++..++.+.......|.+ +.+ ..+ .. ...|+|++++
T Consensus 137 ~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~ 216 (324)
T cd08292 137 VKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSV 216 (324)
T ss_pred CCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECC
Confidence 357999999987 8899999999999999988875555454444445763 221 111 11 1489999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|... + .+.++.+++++.++.+|..
T Consensus 217 g~~~-~-~~~~~~l~~~g~~v~~g~~ 240 (324)
T cd08292 217 GGKL-A-GELLSLLGEGGTLVSFGSM 240 (324)
T ss_pred CChh-H-HHHHHhhcCCcEEEEEecC
Confidence 9753 3 4668999999999999864
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.034 Score=56.18 Aligned_cols=80 Identities=16% Similarity=0.049 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCc--CCccEEEEEccCCCcC-------CCCCCCCcEEEE
Q psy15208 89 ETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVAVKKW-------LIPEVPKNTIII 159 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~~~~~-------~l~~i~~PvLiI 159 (1027)
....+...++.....++..+++++||||||.+|..++...+.. .....++..+++.... ........+..+
T Consensus 10 ~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~~~~~~~~~~~~~~i 89 (153)
T cd00741 10 LANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAEDRLDPSDALFVDRI 89 (153)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHHHhhhccCCccEEEE
Confidence 4455556666666567888999999999999999999887652 2456677777664321 223344667788
Q ss_pred EeCCCCCCC
Q psy15208 160 HGELDEIIP 168 (1027)
Q Consensus 160 hG~~D~iVP 168 (1027)
+...|.+..
T Consensus 90 ~~~~D~v~~ 98 (153)
T cd00741 90 VNDNDIVPR 98 (153)
T ss_pred EECCCccCC
Confidence 888886643
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PRK06199 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.035 Score=64.83 Aligned_cols=93 Identities=18% Similarity=0.134 Sum_probs=69.1
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CC-C-EEEEEcCCchhHHH-H----hhc-C---cE-EcCHHHHhccCCEEEecCCC
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LS-A-QVWIIEIDPICALQ-A----AME-G---FL-VVTMEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~G-a-~ViV~d~dp~r~~~-A----~~~-G---~~-v~~~~e~l~~aDvvi~atG~ 875 (1027)
.-++++|+|+|..++..++.+.. +. . +|.|+++++.++.. + ... | +. +.+.++++.+||||++||.+
T Consensus 154 da~~l~iiG~G~QA~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~s 233 (379)
T PRK06199 154 DSKVVGLLGPGVMGKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNSG 233 (379)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccCC
Confidence 45899999999999999888876 42 4 79999999977653 1 111 3 33 34689999999999998853
Q ss_pred c-------ccCcHHHHhcCCCCeEEEEecCCCcccchh
Q psy15208 876 Y-------HVITHDHMRDMKDQAIVCNIGHFDNEIEVE 906 (1027)
Q Consensus 876 ~-------~vi~~~~~~~mk~gailvNvG~~d~eid~~ 906 (1027)
. .++..+ .+|+|+.+..+|.. |+|-.
T Consensus 234 ~~~~~s~~Pv~~~~---~lkpG~hv~~ig~~--eld~~ 266 (379)
T PRK06199 234 ETGDPSTYPYVKRE---WVKPGAFLLMPAAC--RIDEG 266 (379)
T ss_pred CCCCCCcCcEecHH---HcCCCcEEecCCcc--cCCHH
Confidence 2 566654 57899988888874 66644
|
|
| >PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.02 Score=67.84 Aligned_cols=88 Identities=18% Similarity=0.109 Sum_probs=65.5
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCc-----------------EEcCHHHHhccCCEEEecC
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGF-----------------LVVTMEYAKKYGDIFVTCT 873 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~-----------------~v~~~~e~l~~aDvvi~at 873 (1027)
-+|+|+|.|.+|...|..++. |-+|+++|+++.+..+.. .|. ...+..+++.++|++|.|.
T Consensus 7 mkI~vIGlGyvGlpmA~~la~-~~~V~g~D~~~~~ve~l~-~G~~~~~e~~~~~l~~~g~l~~t~~~~~~~~advvii~V 84 (425)
T PRK15182 7 VKIAIIGLGYVGLPLAVEFGK-SRQVVGFDVNKKRILELK-NGVDVNLETTEEELREARYLKFTSEIEKIKECNFYIITV 84 (425)
T ss_pred CeEEEECcCcchHHHHHHHhc-CCEEEEEeCCHHHHHHHH-CcCCCCCCCCHHHHHhhCCeeEEeCHHHHcCCCEEEEEc
Confidence 579999999999999999877 789999999997765543 333 2333345678999999998
Q ss_pred CCc----------ccCc--HHHHhcCCCCeEEEEecCCC
Q psy15208 874 GNY----------HVIT--HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 874 G~~----------~vi~--~~~~~~mk~gailvNvG~~d 900 (1027)
+++ .+.. ....+.+++|.++|+.....
T Consensus 85 ptp~~~~~~~dl~~v~~a~~~i~~~l~~g~lVI~~STv~ 123 (425)
T PRK15182 85 PTPINTYKQPDLTPLIKASETVGTVLNRGDIVVYESTVY 123 (425)
T ss_pred CCCCCCCCCcchHHHHHHHHHHHHhcCCCCEEEEecCCC
Confidence 876 2221 12246689999999987764
|
|
| >PRK06476 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.024 Score=62.59 Aligned_cols=86 Identities=10% Similarity=0.064 Sum_probs=61.5
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC---EEEEEcCCchhHHHHhh-c-CcEE-cCHHHHhccCCEEEecCCCcccCcHHHHh
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSA---QVWIIEIDPICALQAAM-E-GFLV-VTMEYAKKYGDIFVTCTGNYHVITHDHMR 885 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga---~ViV~d~dp~r~~~A~~-~-G~~v-~~~~e~l~~aDvvi~atG~~~vi~~~~~~ 885 (1027)
+|+|+|+|.+|..+++.+...|- .|.++++++.++.+... . |..+ .+.++++.++|+|+.|+.... + .+.++
T Consensus 2 ~IgiIG~G~mG~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~aDvVilav~p~~-~-~~vl~ 79 (258)
T PRK06476 2 KIGFIGTGAITEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRIAKDNQAVVDRSDVVFLAVRPQI-A-EEVLR 79 (258)
T ss_pred eEEEECcCHHHHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceEeCCHHHHHHhCCEEEEEeCHHH-H-HHHHH
Confidence 69999999999999999998774 36788888877655433 3 4654 467778889999999987432 2 22222
Q ss_pred c--CCCCeEEEEecCC
Q psy15208 886 D--MKDQAIVCNIGHF 899 (1027)
Q Consensus 886 ~--mk~gailvNvG~~ 899 (1027)
. ++++.+++.+...
T Consensus 80 ~l~~~~~~~vis~~ag 95 (258)
T PRK06476 80 ALRFRPGQTVISVIAA 95 (258)
T ss_pred HhccCCCCEEEEECCC
Confidence 2 4677777776644
|
|
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.033 Score=61.96 Aligned_cols=105 Identities=18% Similarity=0.050 Sum_probs=82.8
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-cCcEEc------CHHHHh
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-EGFLVV------TMEYAK 863 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-~G~~v~------~~~e~l 863 (1027)
++...+.++.+. +..-+|+||+|-++ |.+|.-+.+.+|..||||+.+--.+.+...... .||+.. ++.++|
T Consensus 134 pG~TAY~gLl~i-gqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L 212 (340)
T COG2130 134 PGLTAYFGLLDI-GQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQAL 212 (340)
T ss_pred chHHHHHHHHHh-cCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHH
Confidence 567777777765 55678999999985 789999999999999999998777776666665 787632 344444
Q ss_pred c-----cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 864 K-----YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 864 ~-----~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+ ..|+.++++|.. +++ ..|..|+..|+++-+|+-
T Consensus 213 ~~a~P~GIDvyfeNVGg~-v~D-Av~~~ln~~aRi~~CG~I 251 (340)
T COG2130 213 KEACPKGIDVYFENVGGE-VLD-AVLPLLNLFARIPVCGAI 251 (340)
T ss_pred HHHCCCCeEEEEEcCCch-HHH-HHHHhhccccceeeeeeh
Confidence 4 369999999886 345 559999999999999984
|
|
| >KOG4230|consensus | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.02 Score=67.57 Aligned_cols=90 Identities=24% Similarity=0.305 Sum_probs=74.2
Q ss_pred hhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEe
Q psy15208 793 RESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVT 871 (1027)
Q Consensus 793 ~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~ 871 (1027)
-.++..-+. ..++.++||++||+|-.. +|.-++..|+-..+.|++|..- .-++.+.+..+|+||-
T Consensus 146 PkGcmeLlk-~a~v~v~Gk~aVVlGRS~IVG~Pia~LL~~~NaTVTiCHSK-------------T~~lae~v~~ADIvIv 211 (935)
T KOG4230|consen 146 PKGCMELLK-EAGVFVAGKNAVVLGRSKIVGSPIAALLLWANATVTICHSK-------------TRNLAEKVSRADIVIV 211 (935)
T ss_pred hHHHHHHHH-HcCCccccceeEEEecccccCChHHHHHHhcCceEEEecCC-------------CccHHHHhccCCEEEE
Confidence 345554444 446789999999999998 8999999999999999999542 2356778889999999
Q ss_pred cCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 872 CTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 872 atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|+|-++.+..+ ++|+|++++++|.-
T Consensus 212 AiG~PefVKgd---WiKpGavVIDvGIN 236 (935)
T KOG4230|consen 212 AIGQPEFVKGD---WIKPGAVVIDVGIN 236 (935)
T ss_pred EcCCcceeecc---cccCCcEEEEcccc
Confidence 99999987755 68999999999974
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.028 Score=57.40 Aligned_cols=87 Identities=16% Similarity=0.140 Sum_probs=58.0
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh--------cC------cE-EcCHHHHhccCCEEEecCCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM--------EG------FL-VVTMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~--------~G------~~-v~~~~e~l~~aDvvi~atG~~ 876 (1027)
+|.|+|.|..|.++|..+...|-+|+++.+++.....-.. .+ .. ..+++++++.+|+|+-++.+.
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs~ 80 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPSQ 80 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-GG
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccHH
Confidence 6899999999999999999999999999998743332111 11 11 345889999999999988765
Q ss_pred cc--CcHHHHhcCCCCeEEEEecC
Q psy15208 877 HV--ITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 877 ~v--i~~~~~~~mk~gailvNvG~ 898 (1027)
.. +-++.-..++++..++++.-
T Consensus 81 ~~~~~~~~l~~~l~~~~~ii~~~K 104 (157)
T PF01210_consen 81 AHREVLEQLAPYLKKGQIIISATK 104 (157)
T ss_dssp GHHHHHHHHTTTSHTT-EEEETS-
T ss_pred HHHHHHHHHhhccCCCCEEEEecC
Confidence 31 11122344567777777653
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.026 Score=63.27 Aligned_cols=92 Identities=12% Similarity=0.086 Sum_probs=70.7
Q ss_pred cccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh------ccCCEEEecC
Q psy15208 807 MIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK------KYGDIFVTCT 873 (1027)
Q Consensus 807 ~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l------~~aDvvi~at 873 (1027)
...|.+|+|.|. |.+|+.+++.++++|++|+++..++.+...+...|++ +.+ ..+.+ ...|+|++++
T Consensus 136 ~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~ 215 (323)
T cd05282 136 LPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAV 215 (323)
T ss_pred CCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECC
Confidence 357999999987 7899999999999999999987777676667667763 222 11111 2479999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
|+... ...++.++++|+++++|..+
T Consensus 216 g~~~~--~~~~~~l~~~g~~v~~g~~~ 240 (323)
T cd05282 216 GGESA--TRLARSLRPGGTLVNYGLLS 240 (323)
T ss_pred CCHHH--HHHHHhhCCCCEEEEEccCC
Confidence 98753 35588999999999998653
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.029 Score=59.79 Aligned_cols=88 Identities=23% Similarity=0.149 Sum_probs=64.0
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH--HhhcC--cEEcCHHHHhccCCEEEecCCCcccC--cHHHH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ--AAMEG--FLVVTMEYAKKYGDIFVTCTGNYHVI--THDHM 884 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~--A~~~G--~~v~~~~e~l~~aDvvi~atG~~~vi--~~~~~ 884 (1027)
++++|+|.|+||.++|.++...|-+|++--++..+... +...+ ++..+.+++.+.+|||+-+..-..+. .++..
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a~~~v~~~l~ 81 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEAIPDVLAELR 81 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHHHHhHHHHHH
Confidence 57899999999999999999999999998555544443 22233 33567889999999999988754322 22333
Q ss_pred hcCCCCeEEEEecCC
Q psy15208 885 RDMKDQAIVCNIGHF 899 (1027)
Q Consensus 885 ~~mk~gailvNvG~~ 899 (1027)
+.+. |-++|.+.-.
T Consensus 82 ~~~~-~KIvID~tnp 95 (211)
T COG2085 82 DALG-GKIVIDATNP 95 (211)
T ss_pred HHhC-CeEEEecCCC
Confidence 4455 8889888765
|
|
| >PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.029 Score=63.61 Aligned_cols=93 Identities=15% Similarity=0.117 Sum_probs=69.3
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHh-CCCEEEEEcCCchhHHHHhhcCcE-EcCH------HHHh----ccCCEEEecCC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRA-LSAQVWIIEIDPICALQAAMEGFL-VVTM------EYAK----KYGDIFVTCTG 874 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~-~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~------~e~l----~~aDvvi~atG 874 (1027)
...|++|+|.|.|.+|..+++.++. +|++|++++.++.+...+...|++ +.+. .+.+ ...|+++.+++
T Consensus 160 ~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~~~d~vi~~~~ 239 (338)
T PRK09422 160 IKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAV 239 (338)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcCCCcEEEEeCC
Confidence 3579999999999999999999998 599999999888888877777764 2221 1112 23675555555
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
....+ .+.++.++.++.++.+|...
T Consensus 240 ~~~~~-~~~~~~l~~~G~~v~~g~~~ 264 (338)
T PRK09422 240 AKAAF-NQAVDAVRAGGRVVAVGLPP 264 (338)
T ss_pred CHHHH-HHHHHhccCCCEEEEEeeCC
Confidence 55544 45589999999999998653
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.021 Score=67.91 Aligned_cols=68 Identities=24% Similarity=0.263 Sum_probs=51.3
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHH-----HHhhcCcEEcC---HHHHhccCCEEEecCCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICAL-----QAAMEGFLVVT---MEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~-----~A~~~G~~v~~---~~e~l~~aDvvi~atG~ 875 (1027)
+.+|+|+|+|.|.+|+.+|+.|+..|++|+++|.++.... +....|.++.. .++....+|+||.++|.
T Consensus 3 ~~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~vv~~~g~ 78 (450)
T PRK14106 3 LKGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEEFLEGVDLVVVSPGV 78 (450)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchhHhhcCCEEEECCCC
Confidence 5799999999999999999999999999999998752221 12233655432 33445679999988874
|
|
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.026 Score=67.64 Aligned_cols=88 Identities=10% Similarity=0.009 Sum_probs=66.3
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc----CcE---EcCHHHHhc---cCCEEEecCCC----c
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME----GFL---VVTMEYAKK---YGDIFVTCTGN----Y 876 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~----G~~---v~~~~e~l~---~aDvvi~atG~----~ 876 (1027)
.+|+|+|.|..|..+|+.+...|-+|.++|+++.+....... |.. ..++++++. .+|+|+.+... .
T Consensus 2 ~~IgvIGLG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~v~ 81 (470)
T PTZ00142 2 SDIGLIGLAVMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEAVD 81 (470)
T ss_pred CEEEEEeEhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHHHH
Confidence 379999999999999999999999999999999775543332 532 346777775 48977765322 2
Q ss_pred ccCcHHHHhcCCCCeEEEEecCC
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.++ .+.+..|++|.++++.|-.
T Consensus 82 ~vi-~~l~~~L~~g~iIID~gn~ 103 (470)
T PTZ00142 82 ETI-DNLLPLLEKGDIIIDGGNE 103 (470)
T ss_pred HHH-HHHHhhCCCCCEEEECCCC
Confidence 344 3446778999999999875
|
|
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.041 Score=61.52 Aligned_cols=87 Identities=7% Similarity=0.028 Sum_probs=62.4
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCC----CEEEEEcCCch-hHHH-HhhcCcEEc-CHHHHhccCCEEEecCCCcccCc--
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALS----AQVWIIEIDPI-CALQ-AAMEGFLVV-TMEYAKKYGDIFVTCTGNYHVIT-- 880 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~G----a~ViV~d~dp~-r~~~-A~~~G~~v~-~~~e~l~~aDvvi~atG~~~vi~-- 880 (1027)
+.++++||+|.+|..+|+.+...| -+|+++++++. +... +...|+.+. +..+++..+|+||.|+....+..
T Consensus 3 ~mkI~~IG~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~~~~~e~~~~aDvVilav~p~~~~~vl 82 (279)
T PRK07679 3 IQNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKKELLTDANILFLAMKPKDVAEAL 82 (279)
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEeCCHHHHHhcCCEEEEEeCHHHHHHHH
Confidence 458999999999999999999888 57999988764 3333 233477643 56777889999999986543211
Q ss_pred HHHHhcCCCCeEEEEe
Q psy15208 881 HDHMRDMKDQAIVCNI 896 (1027)
Q Consensus 881 ~~~~~~mk~gailvNv 896 (1027)
.+....++++.+++.+
T Consensus 83 ~~l~~~~~~~~liIs~ 98 (279)
T PRK07679 83 IPFKEYIHNNQLIISL 98 (279)
T ss_pred HHHHhhcCCCCEEEEE
Confidence 1222346678888886
|
|
| >PRK13529 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.24 Score=59.98 Aligned_cols=125 Identities=16% Similarity=0.230 Sum_probs=87.9
Q ss_pred cccchhhhhhHHHHHhh---hcCccccCCEEEEEcCChhHHHHHHHHHh----CCC-------EEEEEcCCc--------
Q psy15208 786 FDNLYGCRESLIDGIKR---ATDVMIAGKIAVIIGYGDVGKGSAQAMRA----LSA-------QVWIIEIDP-------- 843 (1027)
Q Consensus 786 ~dn~~g~~~s~~~~i~r---~t~~~l~Gk~VvViG~G~IG~~vA~~a~~----~Ga-------~ViV~d~dp-------- 843 (1027)
.|...||+-....++.. .++..+...+++++|+|.-|.++|+.+.. .|. ++.++|..-
T Consensus 268 nDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~ 347 (563)
T PRK13529 268 NDDIQGTGAVTLAGLLAALKITGEPLSDQRIVFLGAGSAGCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPD 347 (563)
T ss_pred ccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCc
Confidence 46778998876666543 55777899999999999999999998886 587 788876642
Q ss_pred ---hhHHHHhhcCc--------EEcCHHHHhccC--CEEEecCCCcccCcHHHHhcCCC---CeEEEEecCCC--cccch
Q psy15208 844 ---ICALQAAMEGF--------LVVTMEYAKKYG--DIFVTCTGNYHVITHDHMRDMKD---QAIVCNIGHFD--NEIEV 905 (1027)
Q Consensus 844 ---~r~~~A~~~G~--------~v~~~~e~l~~a--Dvvi~atG~~~vi~~~~~~~mk~---gailvNvG~~d--~eid~ 905 (1027)
.+...|....- ...++.++++.+ |++|-+++..++++++.++.|.. .-++.-.+-.. .|+..
T Consensus 348 l~~~k~~fa~~~~~~~~~~~~~~~~~L~e~v~~~kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aE~tp 427 (563)
T PRK13529 348 LLDFQKPYARKREELADWDTEGDVISLLEVVRNVKPTVLIGVSGQPGAFTEEIVKEMAAHCERPIIFPLSNPTSRAEATP 427 (563)
T ss_pred chHHHHHHhhhcccccccccccCCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCcCCCcccCH
Confidence 22223433210 114788999877 99999998788999999999976 55554443332 26665
Q ss_pred hhhhc
Q psy15208 906 EKLKK 910 (1027)
Q Consensus 906 ~~l~~ 910 (1027)
+....
T Consensus 428 e~a~~ 432 (563)
T PRK13529 428 EDLIA 432 (563)
T ss_pred HHHHH
Confidence 54433
|
|
| >KOG0089|consensus | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.03 Score=61.07 Aligned_cols=104 Identities=22% Similarity=0.237 Sum_probs=75.1
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.++|.-+.| +++.+.||+++|+|--. +|+-+|..|+.-|+++.=.|..-..- ...+-..-.++....++|++
T Consensus 148 cTP~gv~eiL~r-~gI~~~GKn~VVigRS~iVg~P~A~LL~~dG~~~~~~~datVti---~hr~t~~~~lk~ht~~adiv 223 (309)
T KOG0089|consen 148 CTPLGVVEILER-TGIETYGKNAVVIGRSKIVGMPLALLLHNDGAHVYSVDDATVTI---FHRYTSKPQLKHHTRDADIV 223 (309)
T ss_pred CchHHHHHHHHH-hCCeecCceEEEEcccccccchHHHHHhhcCCcccccCcceEEE---EEcCCCchhHHHHHHhccee
Confidence 456778877766 48889999999999998 89999999999987665432211000 00000011234556789999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
|.+.|-+++|+.+ .+|+|+.++|+|.-.+
T Consensus 224 i~a~g~p~li~~d---~Ik~Ga~vidvgin~v 252 (309)
T KOG0089|consen 224 ISAVGIPNLITSD---MIKPGAAVIDVGINRV 252 (309)
T ss_pred ehhcCCCcccccc---eeecCceeEecCCCcc
Confidence 9999999999866 5799999999998643
|
|
| >COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.036 Score=61.53 Aligned_cols=94 Identities=15% Similarity=0.166 Sum_probs=71.7
Q ss_pred CEEEEEcCChhHHHHHHHHHhCC----CEEEEEcCCchhHH-HHhhcCcE-EcCHHHHhccCCEEEecCCCcccCcHHHH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALS----AQVWIIEIDPICAL-QAAMEGFL-VVTMEYAKKYGDIFVTCTGNYHVITHDHM 884 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~G----a~ViV~d~dp~r~~-~A~~~G~~-v~~~~e~l~~aDvvi~atG~~~vi~~~~~ 884 (1027)
.++++||+|.+|..++..+...| .+|+|+++++.++. .+...|.. ..+..++..++|+||.|.--. .-.+.+
T Consensus 2 ~~IgfIG~G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~~l~~~~g~~~~~~~~~~~~~advv~LavKPq--~~~~vl 79 (266)
T COG0345 2 MKIGFIGAGNMGEAILSGLLKSGALPPEEIIVTNRSEEKRAALAAEYGVVTTTDNQEAVEEADVVFLAVKPQ--DLEEVL 79 (266)
T ss_pred ceEEEEccCHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHHHHHHHcCCcccCcHHHHHhhCCEEEEEeChH--hHHHHH
Confidence 47999999999999999999999 48999999998775 67777777 445667788999999987332 334557
Q ss_pred hcCC---CCeEEEEecCCCcccchhhhh
Q psy15208 885 RDMK---DQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 885 ~~mk---~gailvNvG~~d~eid~~~l~ 909 (1027)
+.++ ++.+++.+.-. +.++.+.
T Consensus 80 ~~l~~~~~~~lvISiaAG---v~~~~l~ 104 (266)
T COG0345 80 SKLKPLTKDKLVISIAAG---VSIETLE 104 (266)
T ss_pred HHhhcccCCCEEEEEeCC---CCHHHHH
Confidence 7777 57788877654 4444444
|
|
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.029 Score=62.41 Aligned_cols=83 Identities=14% Similarity=0.109 Sum_probs=58.3
Q ss_pred EEEEEcCChhHHHHHHHHHhC--CCE-EEEEcCCchhHHHHh-hcCcE-EcCHHHHhccCCEEEecCCCcccCcHHHHhc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRAL--SAQ-VWIIEIDPICALQAA-MEGFL-VVTMEYAKKYGDIFVTCTGNYHVITHDHMRD 886 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~--Ga~-ViV~d~dp~r~~~A~-~~G~~-v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~ 886 (1027)
+|+|+|+|.||+.+++.+... +.+ +.++|+++.+...+. ..|.. ..++++.+.++|+|+.|++... ...-....
T Consensus 3 rIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~~~~~~~ell~~~DvVvi~a~~~~-~~~~~~~a 81 (265)
T PRK13304 3 KIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAKACLSIDELVEDVDLVVECASVNA-VEEVVPKS 81 (265)
T ss_pred EEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCeeECCHHHHhcCCCEEEEcCChHH-HHHHHHHH
Confidence 799999999999999988875 465 667899987665433 34444 4568888888999999987543 33333445
Q ss_pred CCCCeEEEE
Q psy15208 887 MKDQAIVCN 895 (1027)
Q Consensus 887 mk~gailvN 895 (1027)
|+.|.-++.
T Consensus 82 l~~Gk~Vvv 90 (265)
T PRK13304 82 LENGKDVII 90 (265)
T ss_pred HHcCCCEEE
Confidence 665544443
|
|
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.049 Score=60.99 Aligned_cols=91 Identities=13% Similarity=0.027 Sum_probs=71.3
Q ss_pred ccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHH----h--ccCCEEEecCC
Q psy15208 808 IAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYA----K--KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~----l--~~aDvvi~atG 874 (1027)
..|.+|+|.| .|.+|..+++.++.+|++|++++.++.+...+...|.+ +.+ ..+. . ...|++++++|
T Consensus 141 ~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 220 (324)
T cd08244 141 TPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVG 220 (324)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCC
Confidence 4689999999 59999999999999999999998888777766666653 221 1111 1 24899999999
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
... . ...++.|+.++.++++|..+
T Consensus 221 ~~~-~-~~~~~~l~~~g~~v~~g~~~ 244 (324)
T cd08244 221 GAI-G-RAALALLAPGGRFLTYGWAS 244 (324)
T ss_pred hHh-H-HHHHHHhccCcEEEEEecCC
Confidence 774 3 56789999999999998753
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.06 Score=60.59 Aligned_cols=106 Identities=13% Similarity=0.051 Sum_probs=69.1
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-CCcE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYP-YLPI 109 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~-~~pv 109 (1027)
+.| +|+.||.|....+. ....+.+.+.. .|.-+.++.. |-+...+. +..+-+.++.+.+.+..... ..-+
T Consensus 25 ~~P-~ViwHG~GD~c~~~---g~~~~~~l~~~~~g~~~~~i~i-g~~~~~s~---~~~~~~Qve~vce~l~~~~~l~~G~ 96 (314)
T PLN02633 25 SVP-FIMLHGIGTQCSDA---TNANFTQLLTNLSGSPGFCLEI-GNGVGDSW---LMPLTQQAEIACEKVKQMKELSQGY 96 (314)
T ss_pred CCC-eEEecCCCcccCCc---hHHHHHHHHHhCCCCceEEEEE-CCCccccc---eeCHHHHHHHHHHHHhhchhhhCcE
Confidence 345 57789997655443 35556665544 2666666655 33322222 23355666777777765211 1249
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
.++|||+||.++-.++.+.|+.+.|+-+|.++++..
T Consensus 97 naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 97 NIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 999999999999999999987457999999987643
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1027 | ||||
| 3d64_A | 494 | Crystal Structure Of S-Adenosyl-L-Homocysteine Hydr | 0.0 | ||
| 3n58_A | 464 | Crystal Structure Of S-Adenosyl-L-Homocysteine Hydr | 1e-172 | ||
| 3iml_A | 399 | Crystal Structure Of S-Adenosylmethionine Synthetas | 1e-150 | ||
| 3dhy_A | 495 | Crystal Structures Of Mycobacterium Tuberculosis S- | 1e-145 | ||
| 3ce6_A | 494 | Crystal Structure Of Mycobacterium Tuberculosis S-A | 1e-145 | ||
| 1b3r_A | 431 | Rat Liver S-Adenosylhomocystein Hydrolase Length = | 1e-142 | ||
| 3nj4_A | 435 | Fluoro-Neplanocin A In Human S-Adenosylhomocysteine | 1e-142 | ||
| 1li4_A | 432 | Human S-Adenosylhomocysteine Hydrolase Complexed Wi | 1e-142 | ||
| 1d4f_A | 431 | Crystal Structure Of Recombinant Rat-Liver D244e Mu | 1e-142 | ||
| 1xwf_A | 431 | K185n Mutated S-adenosylhomocysteine Hydrolase Leng | 1e-142 | ||
| 1v8b_A | 479 | Crystal Structure Of A Hydrolase Length = 479 | 1e-141 | ||
| 3ond_A | 488 | Crystal Structure Of Lupinus Luteus S-Adenosyl-L-Ho | 1e-140 | ||
| 3h9u_A | 436 | S-Adenosyl Homocysteine Hydrolase (Sahh) From Trypa | 1e-138 | ||
| 3g1u_A | 437 | Crystal Structure Of Leishmania Major S- Adenosylho | 1e-136 | ||
| 1fug_A | 383 | S-adenosylmethionine Synthetase Length = 383 | 1e-134 | ||
| 1a7a_A | 432 | Structure Of Human Placental S-adenosylhomocysteine | 1e-133 | ||
| 3gvp_A | 435 | Human Sahh-Like Domain Of Human Adenosylhomocystein | 1e-124 | ||
| 1xrb_A | 383 | S-adenosylmethionine Synthetase (mat, Atp: L-methio | 1e-124 | ||
| 3mtg_A | 444 | Crystal Structure Of Human S-Adenosyl Homocysteine | 1e-123 | ||
| 3rv2_A | 407 | Crystal Structure Of S-Adenosylmethionine Synthetas | 1e-108 | ||
| 3s82_A | 407 | Structure Of A S-Adenosylmethionine Synthetase From | 1e-108 | ||
| 3tde_A | 408 | Crystal Structure Of S-Adenosylmethionine Synthetas | 1e-106 | ||
| 1qm4_A | 396 | Methionine Adenosyltransferase Complexed With A L-M | 1e-100 | ||
| 2obv_A | 384 | Crystal Structure Of The Human S-adenosylmethionine | 1e-100 | ||
| 2p02_A | 396 | Crystal Structure Of The Alpha Subunit Of Human S- | 1e-99 | ||
| 3so4_A | 415 | Methionine-Adenosyltransferase From Entamoeba Histo | 4e-97 | ||
| 3trd_A | 208 | Structure Of An Alpha-Beta Serine Hydrolase Homolog | 3e-25 | ||
| 2fuk_A | 220 | Crystal Structure Of Xc6422 From Xanthomonas Campes | 8e-20 | ||
| 2i3d_A | 249 | Crystal Structure Of Protein Of Unknown Function At | 3e-17 |
| >pdb|3D64|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase From Burkholderia Pseudomallei Length = 494 | Back alignment and structure |
|
| >pdb|3N58|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase From Brucella Melitensis In Ternary Complex With Nad And Adenosine, Orthorhombic Form Length = 464 | Back alignment and structure |
|
| >pdb|3IML|A Chain A, Crystal Structure Of S-Adenosylmethionine Synthetase From Burkholderia Pseudomallei Length = 399 | Back alignment and structure |
|
| >pdb|3DHY|A Chain A, Crystal Structures Of Mycobacterium Tuberculosis S-Adenosyl- Homocysteine Hydrolase In Ternary Complex With Substrate An Inhibitors Length = 495 | Back alignment and structure |
|
| >pdb|3CE6|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex With Nad And Adenosine Length = 494 | Back alignment and structure |
|
| >pdb|1B3R|A Chain A, Rat Liver S-Adenosylhomocystein Hydrolase Length = 431 | Back alignment and structure |
|
| >pdb|3NJ4|A Chain A, Fluoro-Neplanocin A In Human S-Adenosylhomocysteine Hydrolase Length = 435 | Back alignment and structure |
|
| >pdb|1LI4|A Chain A, Human S-Adenosylhomocysteine Hydrolase Complexed With Neplanocin Length = 432 | Back alignment and structure |
|
| >pdb|1D4F|A Chain A, Crystal Structure Of Recombinant Rat-Liver D244e Mutant S- Adenosylhomocysteine Hydrolase Length = 431 | Back alignment and structure |
|
| >pdb|1XWF|A Chain A, K185n Mutated S-adenosylhomocysteine Hydrolase Length = 431 | Back alignment and structure |
|
| >pdb|1V8B|A Chain A, Crystal Structure Of A Hydrolase Length = 479 | Back alignment and structure |
|
| >pdb|3OND|A Chain A, Crystal Structure Of Lupinus Luteus S-Adenosyl-L-Homocysteine Hydrolase In Complex With Adenosine Length = 488 | Back alignment and structure |
|
| >pdb|3H9U|A Chain A, S-Adenosyl Homocysteine Hydrolase (Sahh) From Trypanosoma Brucei Length = 436 | Back alignment and structure |
|
| >pdb|3G1U|A Chain A, Crystal Structure Of Leishmania Major S- Adenosylhomocysteine Hydrolase Length = 437 | Back alignment and structure |
|
| >pdb|1FUG|A Chain A, S-adenosylmethionine Synthetase Length = 383 | Back alignment and structure |
|
| >pdb|1A7A|A Chain A, Structure Of Human Placental S-adenosylhomocysteine Hydrolase: Determination Of A 30 Selenium Atom Substructure From Data At A Single Wavelength Length = 432 | Back alignment and structure |
|
| >pdb|3GVP|A Chain A, Human Sahh-Like Domain Of Human Adenosylhomocysteinase 3 Length = 435 | Back alignment and structure |
|
| >pdb|1XRB|A Chain A, S-adenosylmethionine Synthetase (mat, Atp: L-methionine S- Adenosyltransferase, E.c.2.5.1.6) In Which Met Residues Are Replaced With Selenomethionine Residues (mse) Length = 383 | Back alignment and structure |
|
| >pdb|3MTG|A Chain A, Crystal Structure Of Human S-Adenosyl Homocysteine Hydrolase Protein Length = 444 | Back alignment and structure |
|
| >pdb|3RV2|A Chain A, Crystal Structure Of S-Adenosylmethionine Synthetase From Mycobacterium Marinum Length = 407 | Back alignment and structure |
|
| >pdb|3S82|A Chain A, Structure Of A S-Adenosylmethionine Synthetase From Mycobacterium Avium Length = 407 | Back alignment and structure |
|
| >pdb|3TDE|A Chain A, Crystal Structure Of S-Adenosylmethionine Synthetase Rv1392 From Mycobacterium Tuberculosis Length = 408 | Back alignment and structure |
|
| >pdb|1QM4|A Chain A, Methionine Adenosyltransferase Complexed With A L-Methionine Analogous Length = 396 | Back alignment and structure |
|
| >pdb|2OBV|A Chain A, Crystal Structure Of The Human S-adenosylmethionine Synthetase 1 In Complex With The Product Length = 384 | Back alignment and structure |
|
| >pdb|2P02|A Chain A, Crystal Structure Of The Alpha Subunit Of Human S- Adenosylmethionine Synthetase 2 Length = 396 | Back alignment and structure |
|
| >pdb|3SO4|A Chain A, Methionine-Adenosyltransferase From Entamoeba Histolytica Length = 415 | Back alignment and structure |
|
| >pdb|3TRD|A Chain A, Structure Of An Alpha-Beta Serine Hydrolase Homologue From Coxiella Burnetii Length = 208 | Back alignment and structure |
|
| >pdb|2FUK|A Chain A, Crystal Structure Of Xc6422 From Xanthomonas Campestris: A Member Of AB SERINE HYDROLASE WITHOUT LID AT 1.6 Resolution Length = 220 | Back alignment and structure |
|
| >pdb|2I3D|A Chain A, Crystal Structure Of Protein Of Unknown Function Atu1826, A Putative AlphaBETA HYDROLASE FROM AGROBACTERIUM TUMEFACIENS Length = 249 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1027 | |||
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 0.0 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 0.0 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 0.0 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 0.0 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 0.0 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 0.0 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 0.0 | |
| 3iml_A | 399 | S-adenosylmethionine synthetase; structural genomi | 0.0 | |
| 1p7l_A | 383 | S-adenosylmethionine synthetase; AMPPNP, SAM, tran | 0.0 | |
| 3s82_A | 407 | S-adenosylmethionine synthase; seattle structural | 0.0 | |
| 3so4_A | 415 | Methionine-adenosyltransferase; structural genomic | 0.0 | |
| 2p02_A | 396 | S-adenosylmethionine synthetase isoform type-2; st | 0.0 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 2e-36 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 4e-31 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 2e-30 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 2e-27 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 3e-17 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-09 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 2e-12 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 1e-10 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 1e-09 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 3e-08 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 7e-07 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 9e-07 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 2e-05 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 3e-05 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 4e-05 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 5e-05 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 8e-05 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 8e-04 |
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} Length = 464 | Back alignment and structure |
|---|
Score = 838 bits (2167), Expect = 0.0
Identities = 296/466 (63%), Positives = 361/466 (77%), Gaps = 3/466 (0%)
Query: 562 SADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVL 621
V+ DI+L+ WGRKE++IAETEM L++ REEF KS+PLKGARISGS+HMTIQTAVL
Sbjct: 2 PGSMVVKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVL 61
Query: 622 IETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGN 681
IETLK LGAEVRW+SCNI+STQDHAAAAIA+ G PVFA KGE++ +YW + +IF WP
Sbjct: 62 IETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWP-- 119
Query: 682 SNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYS 741
+ E +NMILDDGGDAT + +GA+AE +LSNP SEEE LF IK ++ +++
Sbjct: 120 -DGEPSNMILDDGGDATMYILIGARAEAGEDVLSNPQSEEEEVLFAQIKKRMAATPGFFT 178
Query: 742 SRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIK 801
+ IKGVTEETTTGV RL ++ K+G L FPAINVNDSVTKSKFDN YGC+ESL+DGI+
Sbjct: 179 KQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIR 238
Query: 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEY 861
R TDVM+AGK+AV+ GYGDVGKGSAQ++ A+V + E+DPICALQAAM+GF VVT++
Sbjct: 239 RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDD 298
Query: 862 AKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVD 921
A DI VT TGN VIT DHMR MKD IV NIGHFDNEI+V L+ KW N+KPQVD
Sbjct: 299 AASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRNLKWTNVKPQVD 358
Query: 922 HIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIYTL 981
I FPDGK++ILL+EGRL+NLG TGHPS+VMS+SF NQ L QIELF T Y +Y L
Sbjct: 359 LIEFPDGKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTRTDAYKNEVYVL 418
Query: 982 PKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
PK LDEKVARL L KL +L+ L+++QA YIGV+ GP+K ++YRY
Sbjct: 419 PKHLDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEHYRY 464
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* Length = 494 | Back alignment and structure |
|---|
Score = 814 bits (2103), Expect = 0.0
Identities = 331/476 (69%), Positives = 388/476 (81%), Gaps = 3/476 (0%)
Query: 552 LTDKAEVLKNSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGS 611
+ ++ D+V+ADI L+ WGRKE+ IAETEM L+ IR+E+ +PLKGARI+GS
Sbjct: 22 MNAAVIDSHSAQDYVVADIALAGWGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGS 81
Query: 612 IHMTIQTAVLIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEF 671
+HMTIQT VLIETLK LGA+VRW+SCNI+STQDHAAAAI G PVFAFKGES+ +YWEF
Sbjct: 82 LHMTIQTGVLIETLKALGADVRWASCNIFSTQDHAAAAIVEAGTPVFAFKGESLDEYWEF 141
Query: 672 NHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKN 731
+HRIF+WP E ANMILDDGGDAT LL LG++AE + S+++ P +EEEV LFKSI+
Sbjct: 142 SHRIFEWPNG---EFANMILDDGGDATLLLILGSKAEKDRSVIARPTNEEEVALFKSIER 198
Query: 732 KLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYG 791
L+ID WYS RL IKGVTEETTTGV+RL +M K+G+L FPA NVNDSVTKSKFDNLYG
Sbjct: 199 HLEIDGSWYSKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDNLYG 258
Query: 792 CRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM 851
CRESL+DGIKRATDVMIAGKIAV+ GYGDVGKG AQ++R L A VW+ EIDPICALQAAM
Sbjct: 259 CRESLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAM 318
Query: 852 EGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKY 911
EG+ VVTMEYA DIFVT TGNYHVI HDHM+ M+ AIVCNIGHFD+EI+V ++Y
Sbjct: 319 EGYRVVTMEYAADKADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVASTRQY 378
Query: 912 KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNT 971
+WENIKPQVDHIIFPDGK++ILLAEGRLVNLGC TGHPS+VMS+SF NQTLAQIELF
Sbjct: 379 QWENIKPQVDHIIFPDGKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTRG 438
Query: 972 SNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
Y +Y LPK LDEKVARL L ++ QLS+L+D QA YIGVSK GP+K D+YRY
Sbjct: 439 GEYANKVYVLPKHLDEKVARLHLARIGAQLSELSDDQAAYIGVSKAGPFKPDHYRY 494
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* Length = 488 | Back alignment and structure |
|---|
Score = 790 bits (2041), Expect = 0.0
Identities = 264/489 (53%), Positives = 328/489 (67%), Gaps = 15/489 (3%)
Query: 551 ELTDKAEVLKNSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISG 610
+ E + ++ + D++ + +GR EIE+AE EM L++ R EF S+P KGA+I+G
Sbjct: 3 HMALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMASRSEFGPSQPFKGAKITG 62
Query: 611 SIHMTIQTAVLIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWE 670
S+HMTIQTAVLIETL LGAEVRW SCNI+STQDHAAAAIA VFA+KGE++ +YW
Sbjct: 63 SLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWW 122
Query: 671 FNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENN------ISILSNPCSEEEVC 724
R DW ++I+DDGGD T L+H G +AE + + E
Sbjct: 123 CTERALDWGPG---GGPDLIVDDGGDTTLLIHEGVKAEEIYEKSGQFPDPDSTDNAEFKI 179
Query: 725 LFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKS 784
+ IK LK D K Y ++ GV+EETTTGV RL +M G L FPAINVNDSVTKS
Sbjct: 180 VLSIIKEGLKTDPKRYHKMKDRVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKS 239
Query: 785 KFDNLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPI 844
KFDNLYGCR SL DG+ RATDVMIAGK+AV+ GYGDVGKG A A++ A+V + EIDPI
Sbjct: 240 KFDNLYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPI 299
Query: 845 CALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIE 904
CALQA MEG V+T+E DIFVT TGN +I DHM+ MK+ AIVCNIGHFDNEI+
Sbjct: 300 CALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNEID 359
Query: 905 VEKLKKY---KWENIKPQVDHIIFPDGKK-IILLAEGRLVNLGCGTGHPSYVMSSSFANQ 960
+ L+ + K IKPQ D +FP+ II+LAEGRL+NLGC TGHPS+VMS SF NQ
Sbjct: 360 MLGLETHPGVKRITIKPQTDRWVFPETNTGIIILAEGRLMNLGCATGHPSFVMSCSFTNQ 419
Query: 961 TLAQIELFNN--TSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNG 1018
+AQ+EL+N + Y +Y LPK LDEKVA L L+KL +L+KL+ QA YI V G
Sbjct: 420 VIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYISVPVEG 479
Query: 1019 PYKLDNYRY 1027
PYK +YRY
Sbjct: 480 PYKPFHYRY 488
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* Length = 436 | Back alignment and structure |
|---|
Score = 782 bits (2023), Expect = 0.0
Identities = 250/473 (52%), Positives = 311/473 (65%), Gaps = 45/473 (9%)
Query: 563 ADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLI 622
+ + + DI+L++WGR+E+E+AE EM L+ +R E+ SKPLKGA+I+G +HMT+QTAVLI
Sbjct: 1 SMYKVRDISLAEWGRRELELAENEMPGLMELRREYGPSKPLKGAKIAGCLHMTMQTAVLI 60
Query: 623 ETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNS 682
ETL LGAEVRW+SCNI+STQDHAAAAIA +GIPVFA+KGE+ +Y +
Sbjct: 61 ETLVELGAEVRWASCNIFSTQDHAAAAIAKRGIPVFAWKGETEEEYMWCMKQTLKGFSGD 120
Query: 683 NTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSS 742
NM+LDDGGD T +
Sbjct: 121 G--YPNMLLDDGGDLTNYVL-----------------------------------DECKE 143
Query: 743 RLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKR 802
+I GV+EETTTGV L + + GKL+ PA+NVNDSVTKSKFDNLYGCRESL+DGIKR
Sbjct: 144 LDGKIYGVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR 203
Query: 803 ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYA 862
ATDVMIAGK A + GYGDVGKG A A+R A+V + E+DPI ALQAAMEG+ V+ +E
Sbjct: 204 ATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDV 263
Query: 863 KKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKY--KWENIKPQV 920
+ IFVT TGN +IT +H M+D AIVCNIGHFD EI+V LK + +KPQV
Sbjct: 264 VEEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKANAKERVEVKPQV 323
Query: 921 DHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNN------TSNY 974
D +G+ IILLAEGRLVNLGC +GHPS+VMS+SF NQ LAQIEL+ N
Sbjct: 324 DRYTMANGRHIILLAEGRLVNLGCASGHPSFVMSNSFCNQVLAQIELWTNRDTGKYPRGA 383
Query: 975 PIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
+Y LPK LDEKVA L L KL +L+KLT +QA+YI +GP+K D+YRY
Sbjct: 384 KAQVYFLPKKLDEKVAALHLGKLGAKLTKLTPKQAEYINCPVDGPFKPDHYRY 436
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* Length = 494 | Back alignment and structure |
|---|
Score = 783 bits (2023), Expect = 0.0
Identities = 264/483 (54%), Positives = 334/483 (69%), Gaps = 16/483 (3%)
Query: 559 LKNSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQT 618
++N DF IAD++L+ +GRKE+ IAE EM L+S+R E+ + +PLKGARISGS+HMT+QT
Sbjct: 14 VRNGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQT 73
Query: 619 AVLIETLKCLGAEVRWSSCNIYSTQDHAAAA---------IASKGIPVFAFKGESISDYW 669
AVLIETL LGAEVRW+SCNI+STQDHAAAA KG+PVFA+KGE++ +YW
Sbjct: 74 AVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPDEPKGVPVFAWKGETLEEYW 133
Query: 670 EFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILS--NPCSEEEVCLFK 727
++ WP + ANMILDDGGDAT L+ G Q E + E
Sbjct: 134 WAAEQMLTWPDPD--KPANMILDDGGDATMLVLRGMQYEKAGVVPPAEEDDPAEWKVFLN 191
Query: 728 SIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFD 787
++ + + D ++ + +KGVTEETTTGV RL + G L+FPAINVNDSVTKSKFD
Sbjct: 192 LLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSKFD 251
Query: 788 NLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICAL 847
N YG R SLIDGI R TD +I GK +I GYGDVGKG A+AM+ A+V + EIDPI AL
Sbjct: 252 NKYGTRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINAL 311
Query: 848 QAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEK 907
QA MEGF VVT+E A DI VT TGN +I +H++ MKD AI+ NIGHFDNEI++
Sbjct: 312 QAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAG 371
Query: 908 LKKY--KWENIKPQVDHIIFPD-GKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQ 964
L++ N+KPQVD F D G+ II+L+EGRL+NLG TGHPS+VMS+SFANQT+AQ
Sbjct: 372 LERSGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQ 431
Query: 965 IELFNNTSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDN 1024
IEL+ Y +Y LPK LDEKVAR+ ++ L L+KLT +QA+Y+GV GPYK D+
Sbjct: 432 IELWTKNDEYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDH 491
Query: 1025 YRY 1027
YRY
Sbjct: 492 YRY 494
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 Length = 479 | Back alignment and structure |
|---|
Score = 777 bits (2009), Expect = 0.0
Identities = 246/478 (51%), Positives = 334/478 (69%), Gaps = 13/478 (2%)
Query: 562 SADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVL 621
+ DI+L+ +G+ ++EI+E EM L+ IREE+ K +PLK A+I+G +HMT++ A+L
Sbjct: 3 ENKSKVKDISLAPFGKMQMEISENEMPGLMRIREEYGKDQPLKNAKITGCLHMTVECALL 62
Query: 622 IETLKCLGAEVRWSSCNIYSTQDHAAAA-IASKGIPVFAFKGESISDYWEFNHRIFDWPG 680
IETL+ LGA++RW SCNIYST D+AAAA + + VFA+K E++ +YW W
Sbjct: 63 IETLQKLGAQIRWCSCNIYSTADYAAAAVSTLENVTVFAWKNETLEEYWWCVESALTWG- 121
Query: 681 NSNTEQANMILDDGGDATFLLHLGAQAENN------ISILSNPCSEEEVCLFKSIKNKLK 734
+ + +MI+DDGGDAT L+H G + E + +EEE C +KN +
Sbjct: 122 DGDDNGPDMIVDDGGDATLLVHKGVEYEKLYEEKNILPDPEKAKNEEERCFLTLLKNSIL 181
Query: 735 IDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRE 794
+ K +++ K+I GV+EETTTGV RL++M K+ +L F AINVND+VTK K+DN+YGCR
Sbjct: 182 KNPKKWTNIAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYDNVYGCRH 241
Query: 795 SLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGF 854
SL DG+ RATD +I+GKI VI GYGDVGKG A +M+ L A+V+I EIDPICA+QA MEGF
Sbjct: 242 SLPDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGF 301
Query: 855 LVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKY--- 911
VVT++ GD F+TCTGN VI +H+ MK+ A+V NIGHFD+EI+V +L Y
Sbjct: 302 NVVTLDEIVDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGI 361
Query: 912 KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNN- 970
EN+KPQVD I P+G KII+LA GRL+NLGC TGHP++VMS SF NQT AQ++L+ N
Sbjct: 362 HIENVKPQVDRITLPNGNKIIVLARGRLLNLGCATGHPAFVMSFSFCNQTFAQLDLWQNK 421
Query: 971 -TSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027
T+ Y +Y LPK LDEKVA LKKLN L++L D Q +++GV+K+GP+K + YRY
Sbjct: 422 DTNKYENKVYLLPKHLDEKVALYHLKKLNASLTELDDNQCQFLGVNKSGPFKSNEYRY 479
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* Length = 435 | Back alignment and structure |
|---|
Score = 769 bits (1989), Expect = 0.0
Identities = 224/467 (47%), Positives = 306/467 (65%), Gaps = 43/467 (9%)
Query: 560 KNSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTA 619
K S+DF + +I +++GR+EIEIAE EM +L+++R+ KPL GA+I G H+T QTA
Sbjct: 9 KGSSDFCVKNIKQAEFGRREIEIAEQEMPALMALRKRAQGEKPLAGAKIVGCTHITAQTA 68
Query: 620 VLIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWP 679
VL+ETL LGA+ RW++CNIYST + AAA+A G PVFA+KGES D+W R +
Sbjct: 69 VLMETLGALGAQCRWAACNIYSTLNEVAAALAESGFPVFAWKGESEDDFWWCIDRCVNVE 128
Query: 680 GNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKW 739
G Q NMILDDGGD T ++ K
Sbjct: 129 G----WQPNMILDDGGDLTHWIY-----------------------------------KK 149
Query: 740 YSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDG 799
Y + K+IKG+ EE+ TGV+RL ++ K GKL PA+NVNDSVTK KFDNLY CRES++DG
Sbjct: 150 YPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILDG 209
Query: 800 IKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTM 859
+KR TD+M GK V+ GYG+VGKG A++A+ + V++ EIDPICALQA M+GF +V +
Sbjct: 210 LKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKL 269
Query: 860 EYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKK--YKWENIK 917
+ DI +TCTGN +V+T +H+ MK+ IVCN+GH + EI+V L+ WE ++
Sbjct: 270 NEVIRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVASLRTPELTWERVR 329
Query: 918 PQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELFNNT-SNYPI 976
QVDH+I+PDGK+I+LLAEGRL+NL C T P++V+S + Q LA IEL+N Y
Sbjct: 330 SQVDHVIWPDGKRIVLLAEGRLLNLSCST-VPTFVLSITATTQALALIELYNAPEGRYKQ 388
Query: 977 GIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLD 1023
+Y LPK +DE VA L L + L++LTD+QAKY+G++KNGP+K +
Sbjct: 389 DVYLLPKKMDEYVASLHLPTFDAHLTELTDEQAKYLGLNKNGPFKPN 435
|
| >3iml_A S-adenosylmethionine synthetase; structural genomics, ATP-BI cobalt, magnesium, metal-binding, nucleotide-binding, one-C metabolism; 2.35A {Burkholderia pseudomallei} Length = 399 | Back alignment and structure |
|---|
Score = 762 bits (1971), Expect = 0.0
Identities = 268/377 (71%), Positives = 321/377 (85%), Gaps = 1/377 (0%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVSEGHPDK+ADQISDAILD I +D +RVAAETLCN L+VL+GEITT ANIDY+ I
Sbjct: 14 ESVSEGHPDKVADQISDAILDAILAQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQI 73
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
R TIK IGY+N DYGIDY+ CAVL+ Y+KQS DIAQGV+ N DQGAGDQGLMFGY
Sbjct: 74 ARDTIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGVDRAHDNNLDQGAGDQGLMFGY 133
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNGKPVAIDTIVL 367
ACDETPELMP I+ SH +V+RQ+ LR++G LPWLRPDAKSQVT+RY +GKP +IDT+VL
Sbjct: 134 ACDETPELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTVRYVDGKPHSIDTVVL 193
Query: 368 STQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKGDCGLTGRK 426
STQH PEI +++EA IEE+I+P +P +L+ + ++L+NPTGRFVIGGP+GDCGLTGRK
Sbjct: 194 STQHAPEIDLPALREAVIEEVIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRK 253
Query: 427 IIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVA 486
IIVDTYGGAAPHGGGAFSGKDPSK+DRSAAY GRY+AKNIVAA LA R IQ+SYAIGVA
Sbjct: 254 IIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVA 313
Query: 487 KPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEP 546
+PTS+MV +FG+G++SDE +T LV++HFDLRPK II+ML+LLRPIY+KT+ YGHFGR+EP
Sbjct: 314 EPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLRPIYEKTAAYGHFGREEP 373
Query: 547 EFTWELTDKAEVLKNSA 563
EF+WE DKA L +A
Sbjct: 374 EFSWEAADKALALAEAA 390
|
| >1p7l_A S-adenosylmethionine synthetase; AMPPNP, SAM, transferase; HET: SAM ANP PPK; 2.50A {Escherichia coli} SCOP: d.130.1.1 d.130.1.1 d.130.1.1 PDB: 1fug_A 1mxb_A* 1mxc_A* 1mxa_A* 1rg9_A* 1xra_A 1xrb_A 1xrc_A Length = 383 | Back alignment and structure |
|---|
Score = 751 bits (1943), Expect = 0.0
Identities = 243/377 (64%), Positives = 297/377 (78%), Gaps = 5/377 (1%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVSEGHPDKIADQISDA+LD I +D KARVA ET ++++ GEITT A +D I
Sbjct: 8 ESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEI 67
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
R T+++IGY + D G D SCAVL KQS DI QGV+ + L +QGAGDQGLMFGY
Sbjct: 68 TRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPL--EQGAGDQGLMFGY 125
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNGKPVAIDTIVL 367
A +ET LMP+ I Y+H +V+RQ+E+RKNG LPWLRPDAKSQVT +YD+GK V ID +VL
Sbjct: 126 ATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVGIDAVVL 185
Query: 368 STQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKGDCGLTGRK 426
STQH EI +S++EA +EEII+PI+P L T++ INPTGRFVIGGP GDCGLTGRK
Sbjct: 186 STQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRK 245
Query: 427 IIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVA 486
IIVDTYGG A HGGGAFSGKDPSK+DRSAAY RY+AKNIVAA LA RC+IQ+SYAIGVA
Sbjct: 246 IIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVA 305
Query: 487 KPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEP 546
+PTSIMV +FG+ K+ E+LT+LV++ FDLRP +I+ML+LL PIYK+T+ YGHFGR
Sbjct: 306 EPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGR--E 363
Query: 547 EFTWELTDKAEVLKNSA 563
F WE TDKA++L+++A
Sbjct: 364 HFPWEKTDKAQLLRDAA 380
|
| >3s82_A S-adenosylmethionine synthase; seattle structural genomics center for infectious disease, S adenosylmethionine synthetase, transferase; 1.73A {Mycobacterium avium} PDB: 3tde_A 3rv2_A Length = 407 | Back alignment and structure |
|---|
Score = 738 bits (1909), Expect = 0.0
Identities = 195/390 (50%), Positives = 262/390 (67%), Gaps = 17/390 (4%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVN- 246
ESV+EGHPDKI D ISD++LD + +D ++RVA ETL + + GE+TT A + +
Sbjct: 15 ESVTEGHPDKICDAISDSVLDALLAQDPRSRVAVETLVTTGQVHVVGEVTTTAKEAFADI 74
Query: 247 --IVRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNF--------DQ 296
VR+ I DIGY++ D G D SC V + QS DIAQGV+ Q
Sbjct: 75 TNTVRERILDIGYDSSDKGFDGASCGVNIGIGAQSPDIAQGVDTAHETRVEGAADPLDAQ 134
Query: 297 GAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDN 356
GAGDQGLMFGYA ++TPE MP I +H + +R +E+RKNG LP+LRPD K+QVT+ +++
Sbjct: 135 GAGDQGLMFGYAINDTPERMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTIEFED 194
Query: 357 GKPVAIDTIVLSTQHDPEIPYRS-----IKEAAIEEIIRPIIPKNLL-KNTRYLINPTGR 410
PV +DT+V+STQH +I + I+E + ++ + L +TR L+NPTG+
Sbjct: 195 DVPVRLDTVVISTQHAADIDLENTLTPDIREKVLNTVLNDLAHDTLDTSSTRLLVNPTGK 254
Query: 411 FVIGGPKGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAAN 470
FV+GGP GD GLTGRKIIVDTYGG A HGGGAFSGKDPSK+DRSAAY R++AKNIVAA
Sbjct: 255 FVVGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNIVAAG 314
Query: 471 LAKRCQIQISYAIGVAKPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRP 530
LA+R ++Q++YAIG A P + + +FG+ + K+ +V + FDLRP II+ L+LLRP
Sbjct: 315 LAERVEVQVAYAIGKAAPVGLFIETFGTATVDPVKIEKIVPEVFDLRPGAIIRDLDLLRP 374
Query: 531 IYKKTSVYGHFGRKEPEFTWELTDKAEVLK 560
IY +T+ YGHFGR + E WE +K + LK
Sbjct: 375 IYAQTAAYGHFGRTDVELPWEQLNKVDDLK 404
|
| >3so4_A Methionine-adenosyltransferase; structural genomics, medical structural genomics of pathogen protozoa, MSGPP; 3.18A {Entamoeba histolytica} Length = 415 | Back alignment and structure |
|---|
Score = 735 bits (1900), Expect = 0.0
Identities = 198/378 (52%), Positives = 254/378 (67%), Gaps = 6/378 (1%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVS GHPDK+ DQISDAILD +D K+ VA ET LI++ GEITT+A ID I
Sbjct: 28 ESVSGGHPDKMCDQISDAILDACLAQDPKSHVACETATKTGLILVLGEITTNAVIDIPKI 87
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
VR +K IGY++ + G DY++C+VL +QS DIA+GV+ + D GAGDQG+MFGY
Sbjct: 88 VRGVVKSIGYDDTNKGFDYQTCSVLSCVEQQSQDIAKGVHVEKKEE-DIGAGDQGIMFGY 146
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNG----KPVAID 363
A DE+ E+MP S ++ R E R+ G LPWLRPD+KSQVTL Y+ KP+ +
Sbjct: 147 ATDESKEMMPLTHVLSTKLILRLQECREKGILPWLRPDSKSQVTLEYEEVEGHLKPIRVH 206
Query: 364 TIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKGDCGL 422
TIV+STQH + I + EE+ + +IPK L+ NP+GRFVIGGP GD GL
Sbjct: 207 TIVISTQHADNVSNEEIAKGLEEEVTQKVIPKELMDDKMLRYYNPSGRFVIGGPMGDAGL 266
Query: 423 TGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYA 482
TGRKIIVDTYGG HGGGAFSGKD SK+DRS AY R+IAK++V A L R +Q+SYA
Sbjct: 267 TGRKIIVDTYGGWGAHGGGAFSGKDSSKVDRSGAYCARWIAKSLVHAGLCHRVLVQLSYA 326
Query: 483 IGVAKPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFG 542
IGV+ P SI V ++G+G + L +V K+FD+RP IIK L L RPI++KT+V GHFG
Sbjct: 327 IGVSHPLSINVNTYGTGICDESILVDIVNKNFDMRPGMIIKELGLTRPIFQKTAVGGHFG 386
Query: 543 RKEPEFTWELTDKAEVLK 560
R +P+F WE + E+
Sbjct: 387 RNDPDFKWEFPKELEIPA 404
|
| >2p02_A S-adenosylmethionine synthetase isoform type-2; structural genomics, structural genomics consortium, SGC, transferase; HET: SAM; 1.21A {Homo sapiens} SCOP: d.130.1.1 d.130.1.1 d.130.1.1 PDB: 1qm4_A 1o92_A* 1o93_A* 1o90_A* 1o9t_A 2obv_A* Length = 396 | Back alignment and structure |
|---|
Score = 723 bits (1869), Expect = 0.0
Identities = 194/375 (51%), Positives = 266/375 (70%), Gaps = 8/375 (2%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESV EGHPDKI DQISDA+LD +D A+VA ET+ +I+L+GEIT+ A +DY +
Sbjct: 24 ESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKV 83
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGY 307
VR+ +K IGY++ G DYK+C VL+ +QS DIAQGV+ D GAGDQGLMFGY
Sbjct: 84 VREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLDRNEE-DIGAGDQGLMFGY 142
Query: 308 ACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNGK----PVAID 363
A DET E MP I +H + + +ELR+NG LPWLRPD+K+QVT++Y + P+ +
Sbjct: 143 ATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVH 202
Query: 364 TIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKGDCGL 422
TIV+S QHD E+ +++A E++I+ ++P L ++T Y + P+GRFVIGGP+GD GL
Sbjct: 203 TIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGL 262
Query: 423 TGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYA 482
TGRKIIVDTYGG HGGGAFSGKD +K+DRSAAY R++AK++V L +R +Q+SYA
Sbjct: 263 TGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYA 322
Query: 483 IGVAKPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFG 542
IGV+ P SI + +G+ + S+ +L +VKK+FDLRP I++ L+L +PIY++T+ YGHFG
Sbjct: 323 IGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKKPIYQRTAAYGHFG 382
Query: 543 RKEPEFTWELTDKAE 557
R F WE+ K +
Sbjct: 383 R--DSFPWEVPKKLK 395
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} Length = 208 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 2e-36
Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 15/190 (7%)
Query: 10 INGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISI 69
I G VG L I P I+ +I HPHPL GGTM+NKVV TL + + LG ++
Sbjct: 11 IQGPVGQLEVMITRPKGIEK---SVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTV 67
Query: 70 RMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLD 129
R NFRGVG S G YD+G GE +D++ +LR+++ + I LAGFSFG ++ AK+
Sbjct: 68 RFNFRGVGKSQGRYDNGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVAYDQK 127
Query: 130 KEISIKILILISVAVKKW---LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPV--V 184
+ LI ++ V + ++ +I+ G+ DE++P + V + N + PV V
Sbjct: 128 ----VAQLISVAPPVFYEGFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFV 183
Query: 185 VIPESVSEGH 194
V+ + H
Sbjct: 184 VMSGA---SH 190
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 Length = 220 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 4e-31
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 7/210 (3%)
Query: 1 MISNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRV 60
+ + ++G VG L A++ P ++ ++ HP GG+M NKVV R
Sbjct: 6 FPTESAALTLDGPVGPLDVAVDLPEPDVAVQ-PVTAIVCHPLSTEGGSMHNKVVTMAARA 64
Query: 61 MLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFV 120
+ LG +R NFR VG S+G++D G+GE DD+ + +++ + P + LAGFSFG +V
Sbjct: 65 LRELGITVVRFNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYV 124
Query: 121 QAKLQKRLDKEISIKILILISVAVKKWLIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180
L+ E + I I + + P ++I G+ DEI+ + V+ W L+
Sbjct: 125 S--LRAAAALEPQVLISIAPPAGRWDFSDVQPPAQWLVIQGDADEIVDPQAVYDWLETLE 182
Query: 181 IP--VVVIPES--VSEGHPDKIADQISDAI 206
+V +P++ + + +
Sbjct: 183 QQPTLVRMPDTSHFFHRKLIDLRGALQHGV 212
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} Length = 176 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 2e-30
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 11/158 (6%)
Query: 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDD 92
+G ++AH F D V L V LG+ R +F + A G+
Sbjct: 4 RGHCILAHG---FESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVR-GR 59
Query: 93 MEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWLIPEV 152
++ LL + P++LAG S G+++ A ++ ++ + L L+ K +P +
Sbjct: 60 LQRLLEIARAATEKGPVVLAGSSLGSYIAA----QVSLQVPTRALFLMVPPTKMGPLPAL 115
Query: 153 PKNTI---IIHGELDEIIPLKDVFLWANPLDIPVVVIP 187
+ I+H DE+IP DV WA ++++
Sbjct: 116 DAAAVPISIVHAWHDELIPAADVIAWAQARSARLLLVD 153
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 Length = 249 | Back alignment and structure |
|---|
Score = 111 bits (277), Expect = 2e-27
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 13/219 (5%)
Query: 1 MISNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRV 60
+ NG G L + +I HPHP FGGTM+N++V L +
Sbjct: 19 FQGHMPEVIFNGPAGRLEGRYQPSKEKS----APIAIILHPHPQFGGTMNNQIVYQLFYL 74
Query: 61 MLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYP-YLPIILAGFSFGTF 119
G+ ++R NFR +G S G +D G GE D L ++Q +P +AG+SFG +
Sbjct: 75 FQKRGFTTLRFNFRSIGRSQGEFDHGAGELSDAASALDWVQSLHPDSKSCWVAGYSFGAW 134
Query: 120 VQAKLQKRLDKEISIKILILISVAVKKWLIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179
+ +L R + + + P + +II+G+ D++ P KDV L
Sbjct: 135 IGMQLLMRRPEIEGFMSIAPQPNTYDFSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKL 194
Query: 180 ------DIPVVVIPES--VSEGHPDKIADQISDAILDEI 210
I +P + G D++ + D + +
Sbjct: 195 KTQKGILITHRTLPGANHFFNGKVDELMGECEDYLDRRL 233
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293 | Back alignment and structure |
|---|
Score = 82.7 bits (204), Expect = 3e-17
Identities = 31/199 (15%), Positives = 66/199 (33%), Gaps = 19/199 (9%)
Query: 707 AENNISILSNPCSEEEVCLFKSIKNKLKIDSKWYSSRLKQ----IKGVTEETTTGVYRLR 762
+ +L + E + N+ + ++ + G++ L
Sbjct: 57 NTVDAILLPISGTNEAGKVDTIFSNESIVLTEEMIEKTPNHCVVYSGISNT------YLN 110
Query: 763 RMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVG 822
+ K+ + + D + N E I + TD I G ++G G VG
Sbjct: 111 QCMKKTNRTLVKLMERDDIA---IYNSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVG 167
Query: 823 KGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTM----EYAKKYGDIFVTCTGNYHV 878
A+ AL A+V + + + A G + + + D+ + T V
Sbjct: 168 MSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDV-DVCI-NTIPALV 225
Query: 879 ITHDHMRDMKDQAIVCNIG 897
+T + + +M V ++
Sbjct: 226 VTANVLAEMPSHTFVIDLA 244
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 71.4 bits (174), Expect = 1e-12
Identities = 85/591 (14%), Positives = 163/591 (27%), Gaps = 178/591 (30%)
Query: 492 MVTSFGSGKISDEKLTMLVKKHF--DLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPE-- 547
M G + + + + + F + K++ ++ + I K + K+
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDV---QDMPKSILSKEEIDHIIMSKDAVSG 63
Query: 548 ---FTWELTDKAE---------VLKNSADFVIADINLSQWGRKEIEIAETEMFSLISIRE 595
W L K E VL+ + F+++ I + E I R+
Sbjct: 64 TLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPI------KTEQRQPSMMTRMYIEQRD 117
Query: 596 EFVKSKPL--KGARISGSIHMTIQTA---------VLIETLK-----CLGAEVRWSSCNI 639
+ K ++ ++ A VLI+ + + +V C
Sbjct: 118 RLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV----CLS 173
Query: 640 YSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATF 699
Y Q + +IF W
Sbjct: 174 YKVQCK-------------------------MDFKIF-W--------------------- 186
Query: 700 LLHLGAQAENNISILSNPCSEEEVCLFKSIKNKL--KIDSKWYSSRLKQIKGVTEETTTG 757
L+L C+ E L + KL +ID W +SR + +
Sbjct: 187 -LNLKN------------CNSPETVL--EMLQKLLYQIDPNW-TSRSDHSSNIKLRIHSI 230
Query: 758 VYRLRRMFKEGKLSFPA---I--NVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKI 812
LRR+ K + + NV ++ + F+ C+ L K+ TD + A
Sbjct: 231 QAELRRLLKSKP--YENCLLVLLNVQNAKAWNAFNL--SCKILLTTRFKQVTDFLSAATT 286
Query: 813 AVI-IGYGDVGKGSAQAMRALSAQVWIIEID-PICALQAAMEGFLVVTMEYAKKYGDIFV 870
I + + + + L + D P + +++
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP---REVLTTNPRRLSIIAES------- 336
Query: 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHFDN--EIEVEKLK---KYKWENIKPQ------ 919
+RD +DN + +KL + ++P
Sbjct: 337 -------------IRDGLA--------TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF 375
Query: 920 VDHIIFPDGKKIILLAEGRLVNL-GCGTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGI 978
+FP I L + V+ + +L + + +T I I
Sbjct: 376 DRLSVFPPSAHI---PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST----ISI 428
Query: 979 YTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNG--PYKLDNYRY 1027
++ L+ KV L+ + D + P LD Y Y
Sbjct: 429 PSI--YLELKVKLENEYALH---RSIVDHYNIPKTFDSDDLIPPYLDQYFY 474
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 65.3 bits (158), Expect = 9e-11
Identities = 67/467 (14%), Positives = 138/467 (29%), Gaps = 136/467 (29%)
Query: 28 KLLKLK---GVVLIAHPHPLFG-GTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83
LL+L+ V++ + G G K + + + +M+F+ +
Sbjct: 143 ALLELRPAKNVLI----DGVLGSG----K--TWVALDVCLSYKVQCKMDFKIFWLNLKNC 192
Query: 84 DSGNGETDDMEILLRYIQKKY---------PYLPIILAGFSFGTFVQAKLQKR----LD- 129
+S + ++ LL I + L I +++K + L
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252
Query: 130 ---KEI------SIKILIL---ISVAVKKWLIPEVPKNTIIIHGEL----DEIIPLKDVF 173
+ S KIL+ V +L + + H + DE +K +
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQVT--DFLSAATTTHISLDHHSMTLTPDE---VKSLL 307
Query: 174 LWANPLDIPVVVIPESVSEGHPDKIA---------------------DQISDAI------ 206
LD +P V +P +++ D+++ I
Sbjct: 308 --LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365
Query: 207 LDE-----------IFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVN-IVRKTIKD 254
L+ +F + L ++ ++ + VN + + ++ +
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAH--IPTILLS-----LIWFDVIKSDVMVVVNKLHKYSLVE 418
Query: 255 IGYNNIDYGI-----DYKSCAVLLIYNKQSL--DIAQGVNEGEGLNFDQGAGDQGLMFGY 307
I + K + + N+ +L I N + + D + Y
Sbjct: 419 KQPKESTISIPSIYLELK----VKLENEYALHRSIVDHYNIPKTFDSDDLIPPY--LDQY 472
Query: 308 ACDETPELMPSAIYYSHLIVKRQSE----LRKN-GNLPWLRPDAKSQVTLRYDNGKPVAI 362
S I + HL E R + +L K +R+D
Sbjct: 473 FY--------SHIGH-HLKNIEHPERMTLFRMVFLDFRFLE--QK----IRHD-STAWNA 516
Query: 363 DTIVLSTQHDPEIPYRS-I--KEAAIEEIIRPIIPKNLLKNTRYLIN 406
+L+T + Y+ I + E ++ I+ L K LI
Sbjct: 517 SGSILNTLQQLKF-YKPYICDNDPKYERLVNAIL-DFLPKIEENLIC 561
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.4 bits (148), Expect = 2e-09
Identities = 98/664 (14%), Positives = 182/664 (27%), Gaps = 166/664 (25%)
Query: 348 SQVTLRYDNGKPVAIDTIV--LSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLLKNTRYLI 405
+ +Y + V D V + ++P + + I+ II + K+ + T L
Sbjct: 12 GEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHII---MSKDAVSGTLRLF 68
Query: 406 --------NPTGRFVIGGPKGDCGLTGRKIIVDTYGGAAP-----------HGGGAFSGK 446
+FV + + I + + + K
Sbjct: 69 WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK 128
Query: 447 D----PSKI---------DRSAAYVGRY----IAKNIVAANLAKRCQIQISYAIGVAKPT 489
R A V K VA ++ SY +
Sbjct: 129 YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCL------SYKVQCKMDF 182
Query: 490 SIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFT 549
I + + + L ML K + + P + + + S+ R
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR-----L 237
Query: 550 WELTDKAEVLKNSADFVIADINLSQWGRKEIEIAETEMFS-----LISIREEFVKSKPLK 604
+ L V+ ++ K F+ L++ R + V
Sbjct: 238 LKSKPYENCL-----LVLLNV----QNAKAW-----NAFNLSCKILLTTRFKQVTDFLSA 283
Query: 605 GARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIP-VFAFKGE 663
S+ T E L ++ C QD + P + E
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLL---KYLDC---RPQDLPREVL--TTNPRRLSIIAE 335
Query: 664 SISDY---WEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSE 720
SI D W+ W + N ++ I++ + L L P
Sbjct: 336 SIRDGLATWDN------WK-HVNCDKLTTIIE-----SSLNVL------------EP--A 369
Query: 721 EEVCLFKSI----KNKLKIDSK-----WYSSRLKQIKGVTEETTTGVYR---LRRMFKEG 768
E +F + + I + W+ IK +++ + + KE
Sbjct: 370 EYRKMFDRLSVFPPS-AHIPTILLSLIWFDV----IKSDVMVVVNKLHKYSLVEKQPKES 424
Query: 769 KLSFPAINVNDSVTKSKFDNLYGCRESLID--GIKRATD------VMIAGKIAVIIGYGD 820
+S P+I + K K +N Y S++D I + D + IG+
Sbjct: 425 TISIPSIYLE---LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL 481
Query: 821 VGKGSAQAMRALSA--------QVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTC 872
+ M + I ++ L Y K Y
Sbjct: 482 KNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFY-KPY------- 533
Query: 873 TGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHIIFPDGKKII 932
I D+ D K + +V I F +IE E L K+ ++ + + + + I
Sbjct: 534 ------IC-DN--DPKYERLVNAILDFLPKIE-ENLICSKYTDL---LRIALMAEDEAIF 580
Query: 933 LLAE 936
A
Sbjct: 581 EEAH 584
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 67.9 bits (166), Expect = 2e-12
Identities = 36/251 (14%), Positives = 77/251 (30%), Gaps = 65/251 (25%)
Query: 17 LHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGV 76
L P + +I H F + +++ + + S+R +F G
Sbjct: 34 LVGTREEPFGEI----YDMAIIFHG---FTANRNTSLLREIANSLRDENIASVRFDFNGH 86
Query: 77 GASSGTYDSGN--GETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISI 134
G S G +++ E +D +L Y++ I L G + G V + L I
Sbjct: 87 GDSDGKFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDL--I 144
Query: 135 KILILIS--------------------------------VAVKKWLIPEVPKNTI----- 157
K ++L++ + + + + + I
Sbjct: 145 KKVVLLAPAATLKGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSA 204
Query: 158 -------IIHGELDEIIPLKDVFLWANPL-DIPVVVIPE---SVSEGHPDKIADQISDAI 206
+IHG D ++ + + + +I S+ + + +D
Sbjct: 205 QFTKPVCLIHGTDDTVVSPNASKKYDQIYQNSTLHLIEGADHCFSDSYQKNAVNLTTD-- 262
Query: 207 LDEIFLKDLKA 217
FL++ A
Sbjct: 263 ----FLQNNNA 269
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 1e-10
Identities = 33/216 (15%), Positives = 66/216 (30%), Gaps = 56/216 (25%)
Query: 3 SNTKFFNINGS--VGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRV 60
S + + +G L N P L +I H F G + + + +
Sbjct: 1 SGAMYIDCDGIKLNAYLDMPKNNPEKCPL------CIIIHG---FTGHSEERHIVAVQET 51
Query: 61 MLSLGYISIRMNFRGVGASSGTYDSGN--GETDDMEILLRYIQKKYPYLPIILAGFSFG- 117
+ +G ++R + G G S G ++ ++ ++ Y +K I +AG S G
Sbjct: 52 LNEIGVATLRADMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGG 111
Query: 118 ------------------------------TFVQAKLQKRLDKEISIKILILISVAVKKW 147
+ K + I ++ +K
Sbjct: 112 LSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDELDAWDGRKLKGN 171
Query: 148 LI------------PEVPKNTIIIHGELDEIIPLKD 171
+ + K +I+HG+ DE +P +
Sbjct: 172 YVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEA 207
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 59.5 bits (144), Expect = 1e-09
Identities = 38/213 (17%), Positives = 69/213 (32%), Gaps = 58/213 (27%)
Query: 30 LKLKGVVLIAHPHPL------FGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83
+L G +L P +GG+ + +V R + LG I + + RG +
Sbjct: 16 DELSGTLLTPTGMPGVLFVHGWGGSQHHSLV--RAREAVGLGCICMTFDLRGHEGYASMR 73
Query: 84 D--SGNGETDDMEILLRYIQKKYPYL---PIILAGFSFGTFVQAKLQKRLDKEISIKILI 138
+ DD++ + PY+ I + G S+G ++ A L + ++ L
Sbjct: 74 QSVTRAQNLDDIKAAYDQLASL-PYVDAHSIAVVGLSYGGYLSALLTRERP----VEWLA 128
Query: 139 LISVAVKKWLIPEVPKNTI---------------------------------IIHGELDE 165
L S A+ K + PK ++ ++ E D
Sbjct: 129 LRSPALYKDAHWDQPKVSLNADPDLMDYRRRALAPGDNLALAACAQYKGDVLLVEAENDV 188
Query: 166 IIPLKD----VFLWANPLDIPVVVIPESVSEGH 194
I+P + N + VI H
Sbjct: 189 IVPHPVMRNYADAFTNARSLTSRVIAG---ADH 218
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 54.7 bits (131), Expect = 3e-08
Identities = 40/225 (17%), Positives = 70/225 (31%), Gaps = 49/225 (21%)
Query: 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSG------ 86
K ++L H G + + L+ G++ + + G G S
Sbjct: 24 KALLLALH-----GLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYV 78
Query: 87 ----NGETDDMEILLRYIQK--KYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILI 140
E R ++ + LP+ LAG S G FV L + + I
Sbjct: 79 EEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGS 138
Query: 141 SV--AVKKWLIPEVP-------------------KNTIIIHGELDEIIPLKDVF-----L 174
+ + + E P + +HG D I+PL + L
Sbjct: 139 GFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEAL 198
Query: 175 WANPLDIPVVVIPESVSEGHPDKIADQISDAILDEIFLKD-LKAR 218
+ + + E EG + ++ L FL+ L+AR
Sbjct: 199 RPHYPEGRLARFVE---EGAGHTLTPLMARVGLA--FLEHWLEAR 238
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 51.5 bits (122), Expect = 7e-07
Identities = 18/116 (15%), Positives = 40/116 (34%), Gaps = 12/116 (10%)
Query: 36 VLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGET----- 90
++ + + D + +++V + G+ +++R D T
Sbjct: 66 LVTISWNGVHYTIPDYR--KSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGW 123
Query: 91 ----DDMEILLRYIQKKYPYLPIILAGFSFGTFVQAK-LQKRLDKEISIKILILIS 141
D++ ++ +I++ I LAG SFG +I IL+
Sbjct: 124 STWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGG 179
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 50.8 bits (121), Expect = 9e-07
Identities = 29/166 (17%), Positives = 58/166 (34%), Gaps = 15/166 (9%)
Query: 17 LHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRG- 75
LH P + +LIA F MD+ L + + G+ R +
Sbjct: 20 LHVWETPPKE-NVPFKNNTILIASG---FARRMDH--FAGLAEYLSTNGFHVFRYDSLHH 73
Query: 76 VGASSGTYDSGN--GETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEIS 133
VG SSG+ D + + + ++Q K I L S V ++ L+
Sbjct: 74 VGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGT-QNIGLIAASLSARVAYEVISDLELSFL 132
Query: 134 IKILILISVA-----VKKWLIPEVPKNTIIIHGELDEIIPLKDVFL 174
I + ++++ + +P + + + + +VF+
Sbjct: 133 ITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFV 178
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} Length = 223 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 2e-05
Identities = 27/187 (14%), Positives = 59/187 (31%), Gaps = 20/187 (10%)
Query: 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETD- 91
G+VL AH G + + + + V+ G ++ ++ + + D
Sbjct: 35 TGIVLFAHG---SGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHLRFDI 91
Query: 92 -----DMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILI--LISV 142
+ ++ +L + G S G + + + +
Sbjct: 92 GLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDL 151
Query: 143 AVKKWLIPEVPKNTIIIHGEL-DEIIPLKDVFLWANPLDIPVVVIPESV----SEGHPDK 197
A +P V T++I G +I + + L +V+IP + G
Sbjct: 152 APS--ALPHVKAPTLLIVGGYDLPVIAMNEDALEQLQTSKRLVIIPRASHLFEEPGALTA 209
Query: 198 IADQISD 204
+A S+
Sbjct: 210 VAQLASE 216
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 3e-05
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 18/96 (18%)
Query: 33 KGVVLIAHPHPLFG-----GTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT---YD 84
K ++ ++H G G + L R+++ L + + G G S G
Sbjct: 60 KALIFVSH-----GAGEHSGRYEE-----LARMLMGLDLLVFAHDHVGHGQSEGERMVVS 109
Query: 85 SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFV 120
+ D+ + +QK YP LP+ L G S G +
Sbjct: 110 DFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAI 145
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 4e-05
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 18/96 (18%)
Query: 33 KGVVLIAHPHPLFG-----GTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT---YD 84
K ++ ++H G G + L R+++ L + + G G S G
Sbjct: 42 KALIFVSH-----GAGEHSGRYEE-----LARMLMGLDLLVFAHDHVGHGQSEGERMVVS 91
Query: 85 SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFV 120
+ D+ + +QK YP LP+ L G S G +
Sbjct: 92 DFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAI 127
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} Length = 270 | Back alignment and structure |
|---|
Score = 45.1 bits (106), Expect = 5e-05
Identities = 21/162 (12%), Positives = 54/162 (33%), Gaps = 5/162 (3%)
Query: 45 FGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGN--GETDDMEILLRYIQK 102
+ M + + SLG +IR ++ G GAS G + G ++ +L + +
Sbjct: 46 YRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGAFRDGTISRWLEEALAVLDHFKP 105
Query: 103 KYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWLIPEVPKNTIIIHGE 162
+ I++ G +Q+ + + + + + ++ E
Sbjct: 106 EK---AILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRE 162
Query: 163 LDEIIPLKDVFLWANPLDIPVVVIPESVSEGHPDKIADQISD 204
E+ + P + + +G +++ + D
Sbjct: 163 RAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMID 204
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 Length = 251 | Back alignment and structure |
|---|
Score = 44.6 bits (105), Expect = 8e-05
Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 31/171 (18%)
Query: 66 YISIRMNFRGVGASSGTYDSGNGETDDMEI---------LLRYIQKKYPYLPIILAGFSF 116
+S + GA+ +G G D +++ ++ ++ Y P+I GFS
Sbjct: 91 ILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSN 150
Query: 117 GTFVQAKLQKRLDKEISIKILILIS--VAVKKWLIPEVPKNTI-IIHGELDEIIPLKDV- 172
G + A + + +L+ + + + P P + I GE D I P++
Sbjct: 151 GANILANVLIEQPE--LFDAAVLMHPLIPFEPKISPAKPTRRVLITAGERDPICPVQLTK 208
Query: 173 ----FLWANPLDIPVVVIPESVSEGHPDKIADQISDAILDEI--FLKDLKA 217
L A + V P GH +I +D + FL
Sbjct: 209 ALEESLKAQGGTVETVWHP----GGH------EIRSGEIDAVRGFLAAYGG 249
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} Length = 335 | Back alignment and structure |
|---|
Score = 42.0 bits (98), Expect = 8e-04
Identities = 18/120 (15%), Positives = 41/120 (34%), Gaps = 14/120 (11%)
Query: 63 SLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQA 122
+ + + G G +D +D++ L+ + + + + L S GT +
Sbjct: 69 AFVQVEVPSGKIGSGPQDHAHD-----AEDVDDLIGILLRDHCMNEVALFATSTGTQLVF 123
Query: 123 KLQKRLDKEISIKILILISVAV---KKWLIPEVPKNTI------IIHGELDEIIPLKDVF 173
+L + + SI +IL V PE + G ++ + + +
Sbjct: 124 ELLENSAHKSSITRVILHGVVCDPENPLFTPEGCAARKEHVEKLMAEGRGEDSLAMLKHY 183
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1027 | |||
| 3iml_A | 399 | S-adenosylmethionine synthetase; structural genomi | 100.0 | |
| 3s82_A | 407 | S-adenosylmethionine synthase; seattle structural | 100.0 | |
| 3so4_A | 415 | Methionine-adenosyltransferase; structural genomic | 100.0 | |
| 1p7l_A | 383 | S-adenosylmethionine synthetase; AMPPNP, SAM, tran | 100.0 | |
| 2p02_A | 396 | S-adenosylmethionine synthetase isoform type-2; st | 100.0 | |
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 100.0 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 100.0 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 100.0 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 100.0 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 100.0 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 100.0 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 100.0 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.87 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.87 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.84 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.83 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.82 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.79 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.79 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.78 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.77 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.76 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.76 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.76 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.76 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.76 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.75 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.75 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.75 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.74 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.74 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.74 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.74 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.74 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.73 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.73 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.73 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.73 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.73 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.73 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.73 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.73 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 99.73 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.72 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.72 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.72 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.72 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.71 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.71 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.71 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.71 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.71 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 99.7 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.7 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.7 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.7 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 99.7 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.69 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.69 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.69 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.69 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.69 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.69 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.69 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.69 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.69 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.69 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.68 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.68 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.67 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.67 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.67 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.67 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.67 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.67 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.67 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.67 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.66 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.66 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.66 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.66 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.66 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.65 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.65 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.65 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.65 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.65 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.64 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.64 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.64 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.64 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.64 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 99.64 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.64 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.64 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.64 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.64 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.64 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.64 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.63 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.63 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.63 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.63 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.63 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.62 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.62 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.62 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.62 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.62 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.61 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.61 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.61 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.61 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.61 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.61 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.6 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.6 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.6 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.6 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.6 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.6 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.6 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.6 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.6 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.59 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.59 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.59 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.59 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.58 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.58 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.58 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.58 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.58 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.57 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.57 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.57 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.57 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.57 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.56 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.56 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.55 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.55 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.55 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.55 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.54 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.54 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.53 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.53 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.53 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.53 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.53 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.53 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.52 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.51 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.51 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.51 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.5 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.25 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.5 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.49 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.48 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.48 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.48 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.48 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.47 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.47 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.47 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.46 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.46 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.45 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.45 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.45 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.45 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.44 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.44 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.43 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.43 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.43 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.42 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.42 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.4 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.4 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.4 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.39 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.39 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.38 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.37 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.37 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.37 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.37 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.37 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.36 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.36 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.34 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.33 | |
| 3kb6_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 99.32 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.31 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.31 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.3 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.28 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.27 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.27 | |
| 4hy3_A | 365 | Phosphoglycerate oxidoreductase; PSI-biology, stru | 99.27 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.27 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.27 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 99.26 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.25 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 99.25 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.25 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.25 | |
| 2pi1_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 99.25 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.24 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 99.24 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.23 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.21 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.2 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 99.2 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.2 | |
| 2yq5_A | 343 | D-isomer specific 2-hydroxyacid dehydrogenase; oxi | 99.19 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 99.18 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 99.18 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 99.16 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 99.15 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 99.14 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 99.13 | |
| 1dxy_A | 333 | D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc | 99.13 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 99.12 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 99.12 | |
| 3oet_A | 381 | Erythronate-4-phosphate dehydrogenase; structural | 99.12 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 99.12 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.11 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 99.1 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.09 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.09 | |
| 4dgs_A | 340 | Dehydrogenase; structural genomics, PSI-biology, N | 99.08 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.08 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.08 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 99.07 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.07 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.06 | |
| 1xdw_A | 331 | NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas | 99.06 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.04 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 99.04 | |
| 1sc6_A | 404 | PGDH, D-3-phosphoglycerate dehydrogenase; alloster | 99.04 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 99.03 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.03 | |
| 3k5p_A | 416 | D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, | 99.02 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.02 | |
| 2o4c_A | 380 | Erythronate-4-phosphate dehydrogenase; erythronate | 99.02 | |
| 1j4a_A | 333 | D-LDH, D-lactate dehydrogenase; NAD-dependent dehy | 99.02 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.02 | |
| 1mx3_A | 347 | CTBP1, C-terminal binding protein 1; nuclear prote | 99.01 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.01 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 98.98 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 98.97 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 98.95 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 98.95 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 98.94 | |
| 1qp8_A | 303 | Formate dehydrogenase; oxidoreductase; HET: NDP; 2 | 98.94 | |
| 1ygy_A | 529 | PGDH, D-3-phosphoglycerate dehydrogenase; oxidored | 98.93 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 98.93 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 98.93 | |
| 3ba1_A | 333 | HPPR, hydroxyphenylpyruvate reductase; two domain | 98.92 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 98.92 | |
| 2cuk_A | 311 | Glycerate dehydrogenase/glyoxylate reductase; stru | 98.92 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 98.91 | |
| 2d0i_A | 333 | Dehydrogenase; structural genomics, NPPSFA, nation | 98.9 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 98.89 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 98.89 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 98.88 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 98.87 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 98.86 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 98.83 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 98.79 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 98.72 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 98.7 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 98.69 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.65 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 98.63 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 98.62 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 98.6 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 98.58 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 98.56 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 98.54 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 98.53 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 98.52 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 98.52 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 98.52 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 98.49 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 98.47 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 98.46 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 98.45 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 98.45 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 98.44 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 98.44 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 98.43 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 98.43 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 98.42 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 98.41 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 98.41 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 98.4 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 98.38 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 98.37 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 98.36 | |
| 1vl6_A | 388 | Malate oxidoreductase; TM0542, NAD-dependent malic | 98.35 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 98.35 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 98.32 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 98.31 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 98.31 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 98.31 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 98.31 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 98.3 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 98.3 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 98.29 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.29 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 98.29 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.27 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 98.27 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.26 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 98.25 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 98.25 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 98.24 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 98.21 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 98.21 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 98.18 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 98.18 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 98.17 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 98.16 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 98.14 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 98.13 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 98.1 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 98.1 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 98.1 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 98.09 | |
| 2a9f_A | 398 | Putative malic enzyme ((S)-malate:NAD+ oxidoreduct | 98.09 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 98.07 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 98.07 | |
| 4b4u_A | 303 | Bifunctional protein fold; oxidoreductase; HET: NA | 98.06 | |
| 1np3_A | 338 | Ketol-acid reductoisomerase; A DEEP figure-OF-eigh | 98.06 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 98.05 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.03 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.03 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 98.02 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.01 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 98.0 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 98.0 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.99 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.99 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 97.99 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 97.99 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.98 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.98 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 97.98 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 97.97 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 97.96 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 97.96 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.95 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.95 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 97.94 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 97.93 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 97.93 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.92 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 97.91 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 97.91 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 97.9 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 97.9 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 97.9 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.9 | |
| 3fr7_A | 525 | Putative ketol-acid reductoisomerase (OS05G057370 | 97.89 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 97.89 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.88 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.88 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 97.87 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.85 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.85 | |
| 1gtm_A | 419 | Glutamate dehydrogenase; oxidoreductase, NAD, NADP | 97.84 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 97.84 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.83 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.83 | |
| 3ulk_A | 491 | Ketol-acid reductoisomerase; branched-chain amino | 97.81 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.8 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 97.79 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 97.79 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.79 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 97.79 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 97.76 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 97.74 | |
| 1zej_A | 293 | HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural | 97.74 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 97.73 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 97.72 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 97.72 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.71 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 97.7 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.7 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 97.69 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 97.69 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 97.69 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.69 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.69 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.68 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 97.68 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.67 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 97.67 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.66 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.66 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 97.66 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 97.65 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.65 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 97.63 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 97.62 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 97.61 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 97.61 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 97.6 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 97.6 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 97.59 | |
| 2i99_A | 312 | MU-crystallin homolog; thyroid hormine binding pro | 97.58 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 97.57 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 97.57 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 97.55 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 97.55 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.55 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 97.54 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.54 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 97.53 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 97.53 | |
| 2yjz_A | 201 | Metalloreductase steap4; oxidoreductase, metabolic | 96.66 | |
| 3b1f_A | 290 | Putative prephenate dehydrogenase; enzyme, 4-hydro | 97.52 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.51 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 97.5 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 97.5 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 97.5 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.5 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.49 | |
| 2qrj_A | 394 | Saccharopine dehydrogenase, NAD+, L-lysine- formin | 97.48 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.48 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 97.48 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 97.46 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 97.46 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.43 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 97.42 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.4 | |
| 1vlv_A | 325 | Otcase, ornithine carbamoyltransferase; TM1097, st | 97.39 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.36 | |
| 3hdj_A | 313 | Probable ornithine cyclodeaminase; APC62486, borde | 97.36 | |
| 2dvm_A | 439 | Malic enzyme, 439AA long hypothetical malate oxido | 97.35 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 97.35 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 97.34 | |
| 1dxh_A | 335 | Ornithine carbamoyltransferase; transcarbamylase; | 97.33 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.32 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.3 | |
| 3nv9_A | 487 | Malic enzyme; rossmann fold, oxidoreductase; 2.25A | 97.28 | |
| 1x7d_A | 350 | Ornithine cyclodeaminase; binds NAD+, binds L-orni | 97.27 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 97.27 | |
| 1pvv_A | 315 | Otcase, ornithine carbamoyltransferase; dodecamer; | 97.24 | |
| 1omo_A | 322 | Alanine dehydrogenase; two-domain, beta-sandwich-d | 97.24 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 97.23 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 97.23 | |
| 2i6u_A | 307 | Otcase, ornithine carbamoyltransferase; X-RAY crys | 97.21 | |
| 2w37_A | 359 | Ornithine carbamoyltransferase, catabolic; transca | 97.2 | |
| 1duv_G | 333 | Octase-1, ornithine transcarbamoylase; enzyme-inhi | 97.17 | |
| 1i36_A | 264 | Conserved hypothetical protein MTH1747; NADP bindi | 97.16 | |
| 2zyd_A | 480 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.14 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.13 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 97.13 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 97.13 | |
| 1yqg_A | 263 | Pyrroline-5-carboxylate reductase; structural geno | 97.12 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 97.1 | |
| 2ef0_A | 301 | Ornithine carbamoyltransferase; TTHA1199, thermus | 97.1 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 97.1 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.05 | |
| 2p4q_A | 497 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.05 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.05 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 97.03 | |
| 3pid_A | 432 | UDP-glucose 6-dehydrogenase; rossmann fold, oxidor | 97.02 | |
| 4hpv_A | 407 | S-adenosylmethionine synthase; structural genomics | 97.02 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.01 | |
| 2q3e_A | 467 | UDP-glucose 6-dehydrogenase; hexamer, structural g | 96.99 | |
| 3mog_A | 483 | Probable 3-hydroxybutyryl-COA dehydrogenase; struc | 96.97 | |
| 3aog_A | 440 | Glutamate dehydrogenase; NAD(H), oxidoreducta; HET | 96.96 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.96 | |
| 2izz_A | 322 | Pyrroline-5-carboxylate reductase 1; amino-acid bi | 96.95 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 96.95 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 96.94 | |
| 2iz1_A | 474 | 6-phosphogluconate dehydrogenase, decarboxylating; | 96.94 | |
| 3k6j_A | 460 | Protein F01G10.3, confirmed by transcript evidenc; | 96.92 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 96.91 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 96.91 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 96.91 | |
| 2tmg_A | 415 | Protein (glutamate dehydrogenase); metabolic role, | 96.9 | |
| 1pg5_A | 299 | Aspartate carbamoyltransferase; 2.60A {Sulfolobus | 96.9 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 96.87 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 96.85 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 96.85 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 96.84 | |
| 1pjq_A | 457 | CYSG, siroheme synthase; rossman fold, nucleotide | 96.84 | |
| 2pgd_A | 482 | 6-phosphogluconate dehydrogenase; oxidoreductase ( | 96.83 | |
| 4f2g_A | 309 | Otcase 1, ornithine carbamoyltransferase 1; struct | 96.78 | |
| 1zcj_A | 463 | Peroxisomal bifunctional enzyme; peroxisomal multi | 96.76 | |
| 3ado_A | 319 | Lambda-crystallin; L-gulonate 3-dehydrogenase, str | 96.76 | |
| 4fcc_A | 450 | Glutamate dehydrogenase; protein complex, rossmann | 96.76 |
| >3iml_A S-adenosylmethionine synthetase; structural genomics, ATP-BI cobalt, magnesium, metal-binding, nucleotide-binding, one-C metabolism; 2.35A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-158 Score=1290.14 Aligned_cols=383 Identities=70% Similarity=1.163 Sum_probs=355.7
Q ss_pred CceEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCC
Q psy15208 181 IPVVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNI 260 (1027)
Q Consensus 181 ~~~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~ 260 (1027)
..++|++|++++|||||+||||+|+++|++|++||++|+||||++++++|+|+|||||++++|+++|||+++++|||+++
T Consensus 7 ~~~lFTSESVseGHPDKicDqISDaILDa~L~~Dp~arVAcEt~~~tg~V~v~GEItt~a~vd~~~ivR~~i~~IGY~~~ 86 (399)
T 3iml_A 7 NDYLFTSESVSEGHPDKVADQISDAILDAILAQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNT 86 (399)
T ss_dssp CEEEEEEEEECTTSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEECSSEEEEEEEEECSCCCCHHHHHHHHHHHHTCC--
T ss_pred cCceEeccccCCCCCcHHHHHHhHHHHHHHHhcCCCCcEEEEEEeccCeEEEEEEEecccccCHHHHHHHHHhccCCCCc
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCC
Q psy15208 261 DYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLP 340 (1027)
Q Consensus 261 ~~g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~ 340 (1027)
++|||++||+|++.|++|||||+|||+.+....+++|||||||||||||||||+||||||+|||+|++||+++||+|++|
T Consensus 87 ~~gFd~~tc~Vl~~i~~QSpDIaqGVd~~~~~~~~~GAGDQGiMFGYA~~ET~elMPlpi~lAH~L~~rl~~~Rk~g~l~ 166 (399)
T 3iml_A 87 DYGIDYRGCAVLVAYDKQSPDIAQGVDRAHDNNLDQGAGDQGLMFGYACDETPELMPLPIHLSHRLVERQANLRRDGRLP 166 (399)
T ss_dssp -------CCEEEEEEEEECC------------CTTCCBSSCEEEEEEEETTSTTSCCHHHHHHHHHHHHHHHHHHTTSST
T ss_pred ccCccCCceEEEEecccCChhHhhhhcccccchhhcCcCcceeEEEEecCCccccCCcHHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999973111247999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEecCCceeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecCCCCc
Q psy15208 341 WLRPDAKSQVTLRYDNGKPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKGD 419 (1027)
Q Consensus 341 ~~~pd~k~qv~~~y~~~~~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~ggp~~d 419 (1027)
|||||+||||||+|++++|+||+||||||||++++++++++++|+|+||++++|++|+ ++|+||||||||||||||+||
T Consensus 167 ~LrPD~KtQVTveY~~~~P~rv~tvViStQH~~~v~~~~l~~~i~e~vi~~vip~~~l~~~t~~~INPtGrFViGGP~gD 246 (399)
T 3iml_A 167 WLRPDAKSQVTVRYVDGKPHSIDTVVLSTQHAPEIDLPALREAVIEEVIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGD 246 (399)
T ss_dssp TEEEEEEEEEEEEEETTEEEEEEEEEEEEEECTTSCHHHHHHHHHHHTTTTTSCGGGCCTTCEEEESTTCCCCSCGGGTS
T ss_pred eecCCCceEEEEEEECCceeeEEEEEEEeecCCCCCHHHHHHHHHHHHHHHhcCcccCCCCcEEEECCCCCeEeCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999888 579999999999999999999
Q ss_pred cccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEeecCCC
Q psy15208 420 CGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTSFGSG 499 (1027)
Q Consensus 420 ~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~~~t~ 499 (1027)
||||||||||||||||++|||||||||||||||||||||||||||||||||||+|||||||||||+++|+||+||||||+
T Consensus 247 aGLTGRKIIVDTYGG~~~HGGGAFSGKDptKVDRSaAYaAR~vAKniVAAGLA~rc~VQlsYAIGva~P~Si~V~tfGT~ 326 (399)
T 3iml_A 247 CGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTG 326 (399)
T ss_dssp CEETTSCTTTTTTTTSSCCCSCCCTTBCTTSHHHHHHHHHHHHHHHHHHTTSCSEEEEEEEECBTCSSCSEEEEECTTCC
T ss_pred ccccccceeeecCCcccCCCCccccCCCccccchHHHHHHHHHHHHHHhhcccceeEEEEEEecCcccceEEEEEeCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHhhhcccC
Q psy15208 500 KISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAEVLKNSA 563 (1027)
Q Consensus 500 ~~~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~~~~~~~ 563 (1027)
++++++|.++|+++|||||++||++|+|++|||++||+||||||++++||||++||+++||++.
T Consensus 327 ~~~~~~i~~~v~~~FdlrP~~Ii~~L~L~~PiY~~tAaYGHFGR~~~~f~WE~~d~v~~lk~~~ 390 (399)
T 3iml_A 327 RVSDETITKLVREHFDLRPKGIIQMLDLLRPIYEKTAAYGHFGREEPEFSWEAADKALALAEAA 390 (399)
T ss_dssp SSCHHHHHHHHHHHCCCSHHHHHHHHTCCSSCCGGGGSSCSSSCCCTTCGGGCCTTHHHHHHHH
T ss_pred ccCHHHHHHHHHHHcCCCHHHHHHHcCCCCCchhhhcCcCCCCCCCCCCCccCccHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999998899999999999999875
|
| >3s82_A S-adenosylmethionine synthase; seattle structural genomics center for infectious disease, S adenosylmethionine synthetase, transferase; 1.73A {Mycobacterium avium} PDB: 3tde_A 3rv2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-158 Score=1291.96 Aligned_cols=382 Identities=51% Similarity=0.849 Sum_probs=358.4
Q ss_pred ceEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeec---cchhHHHHHHHHhhhcCCC
Q psy15208 182 PVVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTD---ANIDYVNIVRKTIKDIGYN 258 (1027)
Q Consensus 182 ~~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~---~~~d~~~~~r~~l~~iGy~ 258 (1027)
.++|++|++++|||||+||||+|+++|++|++||++|+||||++++++|+|+|||||+ +++|+++|||+++++|||+
T Consensus 9 ~~lFTSESVseGHPDKicDqISDAILDa~L~~Dp~arVAcEt~vttg~V~v~GEItt~~~~a~vd~~~ivR~~i~~IGY~ 88 (407)
T 3s82_A 9 GRLFTSESVTEGHPDKICDAISDSVLDALLAQDPRSRVAVETLVTTGQVHVVGEVTTTAKEAFADITNTVRERILDIGYD 88 (407)
T ss_dssp CEEEEEEEECTTSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEEETTEEEEEEEEECSCHHHHHTHHHHHHHHHHHHTCE
T ss_pred ceEEeeccccCCCCcHHHhhhhHHHHHHHHhcCCCCcEEEEEEeccCeEEEEEEEeeCCcccccCHHHHHHHHHHhcCCC
Confidence 4789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CCCCCccccceEEEEeeccCChhhhhccccCC--------CCCcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHH
Q psy15208 259 NIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGE--------GLNFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQ 330 (1027)
Q Consensus 259 ~~~~g~~~~~~~~~~~i~~qs~~i~~~v~~~~--------~~~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~ 330 (1027)
++++|||++||+|++.|++|||||+|||+.+. +..+++|||||||||||||||||+||||||+|||+|++||
T Consensus 89 ~~~~gFd~~tc~Vl~~i~~QSpDIaqGVd~~~e~r~~~~~~~~~~~GAGDQGiMFGYA~~ET~elMPlpi~lAH~L~~rl 168 (407)
T 3s82_A 89 SSDKGFDGASCGVNIGIGAQSPDIAQGVDTAHETRVEGAADPLDAQGAGDQGLMFGYAINDTPERMPLPIALAHRLSRRL 168 (407)
T ss_dssp EGGGTEETTTSEEEEEEEEECC--------------------------CCCEEEEEEEETTSTTSSCHHHHHHHHHHHHH
T ss_pred CcccCcCCCceEEEEecccCChHHHhhhcchhhcccccccchhhhcCCccceeEEEEecCCCcccCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999641 1113689999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCceeEEEEecCCceeEEeEEEEeeccCCCCChHH-HHHHHHHHhhhcccCC----CCC-CCceEE
Q psy15208 331 SELRKNGNLPWLRPDAKSQVTLRYDNGKPVAIDTIVLSTQHDPEIPYRS-IKEAAIEEIIRPIIPK----NLL-KNTRYL 404 (1027)
Q Consensus 331 ~~~r~~~~~~~~~pd~k~qv~~~y~~~~~~~~~~~~~s~qh~~~~~~~~-~~~~~~~~vi~~~~~~----~~~-~~~~~~ 404 (1027)
+++||+|++||||||+||||||+|++|+|+||+||||||||++++++++ ++++|+|+||++|+|+ +|+ ++|+||
T Consensus 169 a~~Rk~g~l~~LrPD~KtQVTveY~~~~P~rv~tvViStQH~~~v~~~~~l~~~i~e~VI~~vip~~~~~~~~~~~t~~~ 248 (407)
T 3s82_A 169 TEVRKNGVLPYLRPDGKTQVTIEFEDDVPVRLDTVVISTQHAADIDLENTLTPDIREKVLNTVLNDLAHDTLDTSSTRLL 248 (407)
T ss_dssp HHHHHTSSSTTEEEEEEEEEEEEEETTEEEEEEEEEEEEEECTTCCTTTTHHHHHHHHTHHHHHHHHCCSSCBCTTCEEE
T ss_pred HHHHHcCCCCeecCCCceEEEEEEECCceeeEEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhcCcccccccCCcCeEEE
Confidence 9999999999999999999999999999999999999999999999999 9999999999999998 777 469999
Q ss_pred ECCCCCceecCCCCccccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeec
Q psy15208 405 INPTGRFVIGGPKGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIG 484 (1027)
Q Consensus 405 inp~g~f~~ggp~~d~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig 484 (1027)
||||||||||||+||||||||||||||||||++|||||||||||||||||||||||||||||||||||+|||||||||||
T Consensus 249 INPtGrFViGGP~gDaGLTGRKIIVDTYGG~~~HGGGAFSGKDptKVDRSaAYaAR~vAKniVAAGLA~rc~VQlsYAIG 328 (407)
T 3s82_A 249 VNPTGKFVVGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNIVAAGLAERVEVQVAYAIG 328 (407)
T ss_dssp ESTTCCCCSCTTTTSEEETTSCTTTTTTTTSSCCCSCCCTTBCTTCHHHHHHHHHHHHHHHHHHTTSCSEEEEEEEECTT
T ss_pred ECCCCCeEECCCcccccccCceEEEecCCCcccCCCccccCCCccccchhHHHHHHHHHHHHHHcccccceEEEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceEEEEeecCCCCCChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHhhhcccC
Q psy15208 485 VAKPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAEVLKNSA 563 (1027)
Q Consensus 485 ~~~p~s~~v~~~~t~~~~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~~~~~~~ 563 (1027)
+++|+||+||||||+++++++|.++|+++|||||++||++|+|++|||++||+||||||++++||||++||+++||+++
T Consensus 329 va~PvSi~V~tfGT~~~~~~~i~~~v~~~FdlrP~~Ii~~L~L~~PiY~~tAaYGHFGR~~~~f~WE~~dkv~~Lk~~~ 407 (407)
T 3s82_A 329 KAAPVGLFIETFGTATVDPVKIEKIVPEVFDLRPGAIIRDLDLLRPIYAQTAAYGHFGRTDVELPWEQLNKVDDLKRAI 407 (407)
T ss_dssp CSSCSEEEEECTTCCSSCHHHHHHHHHHHSCCSHHHHHHHTTCSSSCCGGGSSSCSSSCSSSCCGGGCCTTHHHHHHHC
T ss_pred cccceEEEEEeCCCCCCCHHHHHHHHHHhcCCCHHHHHHHcCCCCCcchhhcCcCCCCCCCCCCCccCCcHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999998899999999999999764
|
| >3so4_A Methionine-adenosyltransferase; structural genomics, medical structural genomics of pathogen protozoa, MSGPP; 3.18A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-156 Score=1276.57 Aligned_cols=375 Identities=53% Similarity=0.875 Sum_probs=357.8
Q ss_pred ceEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCC
Q psy15208 182 PVVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNID 261 (1027)
Q Consensus 182 ~~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~ 261 (1027)
.++|++|++++|||||+||||+|+++|++|++||++|+||||++++++|+|+|||||++++|+++|||+++++|||++++
T Consensus 22 ~~lFTSESVseGHPDKicDqISDAILDa~L~qDp~arVAcEt~vttg~V~v~GEItt~a~vD~~~ivR~~ik~IGY~~~~ 101 (415)
T 3so4_A 22 RFFFTSESVSGGHPDKMCDQISDAILDACLAQDPKSHVACETATKTGLILVLGEITTNAVIDIPKIVRGVVKSIGYDDTN 101 (415)
T ss_dssp CEEEEEEEECTTSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEECSSEEEEEEEEECSCCCCHHHHHHHHHHHHTCEEGG
T ss_pred ceeEeeccccCCCChHHHhhHhHHHHHHHHhcCCCCcEEEEEEeecCeEEEEEEEecccccCHHHHHHHHHhccCCCCcc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCC
Q psy15208 262 YGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPW 341 (1027)
Q Consensus 262 ~g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~~ 341 (1027)
+|||++||+|++.|++|||||+|||+.+++ .+++|||||||||||||||||+||||||+|||+|++||+++||+|++||
T Consensus 102 ~gFd~~tc~Vl~~i~~QSpDIaqGVd~~~~-~~~~GAGDQGiMFGYAtdET~elMPlpi~lAH~L~~rla~~Rk~g~l~~ 180 (415)
T 3so4_A 102 KGFDYQTCSVLSCVEQQSQDIAKGVHVEKK-EEDIGAGDQGIMFGYATDESKEMMPLTHVLSTKLILRLQECREKGILPW 180 (415)
T ss_dssp GTEETTTCEEEEEEEEECCC------------CCCCCSSCEEEEEEEETTSTTSSCHHHHHHHHHHHHHHHHHHHSSSTT
T ss_pred cCccCCceEEEEecccCChhhhhccccccc-hhhcCCCcceeEEEEecCCCcccCCcHHHHHHHHHHHHHHHHHcCCCCe
Confidence 999999999999999999999999997532 2479999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEecC--C--ceeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecCC
Q psy15208 342 LRPDAKSQVTLRYDN--G--KPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGP 416 (1027)
Q Consensus 342 ~~pd~k~qv~~~y~~--~--~~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~ggp 416 (1027)
||||+||||||+|++ | +|+||+||||||||++++++++++++|+|+||++|+|++|+ ++|+||||||||||||||
T Consensus 181 LrPD~KtQVTveY~~~~g~~~P~rv~tvViStQH~~~v~~~~l~~~i~e~VI~~vip~~~ld~~t~~~INPtGrFViGGP 260 (415)
T 3so4_A 181 LRPDSKSQVTLEYEEVEGHLKPIRVHTIVISTQHADNVSNEEIAKGLEEEVTQKVIPKELMDDKMLRYYNPSGRFVIGGP 260 (415)
T ss_dssp EEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEECTTSCHHHHHHHHHHHTHHHHSCTTTCCSSCEEEESTTCCCCSCTT
T ss_pred eccCcceEEEEEEEcCCCCceeeEEEEEEEEEecCCCCCHHHHHHHHHHHHHHHhcCcccCCCCeEEEECCCCCeEECCC
Confidence 999999999999974 4 89999999999999999999999999999999999999988 579999999999999999
Q ss_pred CCccccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEeec
Q psy15208 417 KGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTSF 496 (1027)
Q Consensus 417 ~~d~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~~ 496 (1027)
+||||||||||||||||||++|||||||||||||||||||||||||||||||||||+|||||||||||+++|+||+||||
T Consensus 261 ~gDaGLTGRKIIVDTYGG~~~HGGGAFSGKDptKVDRSaAYaAR~vAKniVAAGLA~rc~VQlsYAIGva~PvSi~V~Tf 340 (415)
T 3so4_A 261 MGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDSSKVDRSGAYCARWIAKSLVHAGLCHRVLVQLSYAIGVSHPLSINVNTY 340 (415)
T ss_dssp TTSCEETTSCTTTTTTTTSSCCCSCCCTTBCTTSHHHHHHHHHHHHHHHHHHTTSCSEEEEEEEECTTCSSCSEEEEEEC
T ss_pred cccccccCceEEEEccCCcccCCCccccCCCccccccchhHHHHHHHHHHHHcCCcCeEEEEEEEeeccccceEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHh
Q psy15208 497 GSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAE 557 (1027)
Q Consensus 497 ~t~~~~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~ 557 (1027)
||+++++++|.++|+++|||||++||++|+|++|||++||+||||||++++||||++||+.
T Consensus 341 GT~~~~~~~i~~~v~~~FdlrP~~Ii~~L~L~~PiY~~tAaYGHFGR~~~~f~WE~~d~l~ 401 (415)
T 3so4_A 341 GTGICDESILVDIVNKNFDMRPGMIIKELGLTRPIFQKTAVGGHFGRNDPDFKWEFPKELE 401 (415)
T ss_dssp SCCSSCHHHHHHHHHHHCCCCHHHHHHHHTTTSSCCTGGGSSCSSSCCCTTCTTSSCCCCC
T ss_pred CCCcCCHHHHHHHHHHhcCCCHHHHHHHcCCCCCcchhhcccccCCCCCCCCCCcCCcccC
Confidence 9999999999999999999999999999999999999999999999998899999999885
|
| >1p7l_A S-adenosylmethionine synthetase; AMPPNP, SAM, transferase; HET: SAM ANP PPK; 2.50A {Escherichia coli} SCOP: d.130.1.1 d.130.1.1 d.130.1.1 PDB: 1fug_A 1mxb_A* 1mxc_A* 1mxa_A* 1rg9_A* 1xra_A 1xrb_A 1xrc_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-156 Score=1270.85 Aligned_cols=378 Identities=64% Similarity=1.053 Sum_probs=369.6
Q ss_pred ceEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCC
Q psy15208 182 PVVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNID 261 (1027)
Q Consensus 182 ~~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~ 261 (1027)
.++|++|++++|||||+||+|+|+++|++|++||++|+||||++++++|+|+|||||++++|+++|||+++++|||++++
T Consensus 2 ~~lFTSESVseGHPDKicDqISDAILDa~L~~Dp~arVAcEt~v~tg~v~v~GEitt~a~vd~~~ivR~~i~~IGY~~~~ 81 (383)
T 1p7l_A 2 KHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSD 81 (383)
T ss_dssp CEEEEEEEECTTSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEEETTEEEEEEEEECSCCCCHHHHHHHHHHHHTCEEGG
T ss_pred CceeeccccCCCCCcHHHHHHHHHHHHHHHhhCCCCcEEEEEEeecCcEEEEEEEeccccCCHHHHHHHHHHHhCCCCcc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCC
Q psy15208 262 YGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPW 341 (1027)
Q Consensus 262 ~g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~~ 341 (1027)
+|||++||+|++.|++|||||+|||+..+. +++||||||||||||||||||||||||+|||+|++||+++||+|++||
T Consensus 82 ~gfd~~tc~v~~~i~~QSpdIa~GV~~~~~--~e~GAGDQGiMFGYA~~ET~e~MPlpi~lAh~L~~rl~~~Rk~g~~~~ 159 (383)
T 1p7l_A 82 MGFDANSCAVLSAIGKQSPDINQGVDRADP--LEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW 159 (383)
T ss_dssp GTEETTTSEEEEEEECCCHHHHHHHSCSST--TTCCCSSCEEEEEEEETTSTTSCCHHHHHHHHHHHHHHHHHHTTSSTT
T ss_pred cCcCCCceEEEEecccCChHHhhhcCcccc--cccccCCCceeeEEecCCCcccCchHHHHHHHHHHHHHHHHhcCCCCc
Confidence 999999999999999999999999996432 368999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEecCCceeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecCCCCcc
Q psy15208 342 LRPDAKSQVTLRYDNGKPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGPKGDC 420 (1027)
Q Consensus 342 ~~pd~k~qv~~~y~~~~~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~ggp~~d~ 420 (1027)
|||||||||||+|++++|+||+||||||||++++++++||++|+|+||++|+|++|+ ++|+||||||||||||||+|||
T Consensus 160 lrPD~KtQVtveY~~~~P~rv~tvviS~QH~~~v~~~~l~~~i~e~vi~~v~p~~~ld~~t~~~iNPtGrFviGGP~gDa 239 (383)
T 1p7l_A 160 LRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDC 239 (383)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEEEEEECTTSCHHHHHHHHHHHTTTTTSCGGGCCTTCEEEESTTSCCCSCHHHHSC
T ss_pred cCCCccceEEEEEeCCceeEEEEEEEEeecCCCCCHHHHHHHHHHHHHHHhcCccccCCCeEEEECCCCCcccCCccccc
Confidence 999999999999999999999999999999999999999999999999999999888 5799999999999999999999
Q ss_pred ccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEeecCCCC
Q psy15208 421 GLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTSFGSGK 500 (1027)
Q Consensus 421 gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~~~t~~ 500 (1027)
|||||||||||||||++|||||||||||||||||||||||||||||||||||+|||||||||||+++|+||+||||||++
T Consensus 240 GLTGRKIIVDTYGG~~~HGGGAFSGKDptKVDRSaAYaAR~vAKniVaAGLA~rc~VQlsYAIGva~PvSi~VdtfGT~~ 319 (383)
T 1p7l_A 240 GLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEK 319 (383)
T ss_dssp EETTCCTTTTTTTTSSCCCSCCCTTBCTTSHHHHHHHHHHHHHHHHHHTTSBSEEEEEEEECTTCCSCSEEEEECTTCBS
T ss_pred cccCceEEEEccCCccCCCCcccCCCCCcccchhhhHHHHHHHHHHhhhccccceeeeeeeecccccccEEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHhhhcccC
Q psy15208 501 ISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAEVLKNSA 563 (1027)
Q Consensus 501 ~~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~~~~~~~ 563 (1027)
+++++|.++|+++|||||++||++|+|++|||++||+||||||+ +||||++||++.||++.
T Consensus 320 ~~~~~i~~~v~~~FdlrP~~Ii~~L~L~~PiY~~tAaYGHFGr~--~fpWE~~d~~~~lk~~~ 380 (383)
T 1p7l_A 320 VPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGRE--HFPWEKTDKAQLLRDAA 380 (383)
T ss_dssp SCHHHHHHHHHHHCCCSHHHHHHHHTCCSSCCGGGGSSCSSSCT--TSTTTCCSHHHHHHHTS
T ss_pred CcHHHHHHHHHHHcCCCHHHHHHhcCCCCCchhhhccccCcCCC--CCCccccchHHHHHHHh
Confidence 99999999999999999999999999999999999999999997 69999999999999775
|
| >2p02_A S-adenosylmethionine synthetase isoform type-2; structural genomics, structural genomics consortium, SGC, transferase; HET: SAM; 1.21A {Homo sapiens} SCOP: d.130.1.1 d.130.1.1 d.130.1.1 PDB: 1qm4_A 1o92_A* 1o93_A* 1o90_A* 1o9t_A 2obv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-154 Score=1259.21 Aligned_cols=373 Identities=52% Similarity=0.919 Sum_probs=363.6
Q ss_pred ceEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCC
Q psy15208 182 PVVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNID 261 (1027)
Q Consensus 182 ~~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~ 261 (1027)
.++|++|++++|||||+||+|+|+++|++|++||++|+||||++++++|+|+|||||++++|+++|||+++++|||++++
T Consensus 18 ~~lFTSESVseGHPDKicDqISDAILDa~L~~Dp~arVAcEt~v~tg~v~v~GEitt~a~vd~~~ivR~~i~~IGY~~~~ 97 (396)
T 2p02_A 18 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSS 97 (396)
T ss_dssp EEEEEEEEECTTSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEEETTEEEEEEEEECSCCCCHHHHHHHHHHHHTCEEGG
T ss_pred ceEEeeccccCCCCcHHHHHHHHHHHHHHHhhCCCCcEEEEEEeecCeEEEEEEEcccccCCHHHHHHHHHHHhCCCCcc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCC
Q psy15208 262 YGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPW 341 (1027)
Q Consensus 262 ~g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~~ 341 (1027)
+|||++||+|++.|++|||||+|||+.... .+++|||||||||||||||||+||||||+|||+|++||+++||+|++||
T Consensus 98 ~gfd~~tc~Vl~~i~~QSpDIaqGV~~~~~-~~e~GAGDQGiMFGYAt~ET~elMPlpi~lAh~L~~rla~~Rk~g~l~~ 176 (396)
T 2p02_A 98 KGFDYKTCNVLVALEQQSPDIAQGVHLDRN-EEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPW 176 (396)
T ss_dssp GTEETTTSEEEEEEECCCHHHHHHHTTTCC-GGGCCBSSCEEEEEEEETTSTTSSCHHHHHHHHHHHHHHHHHHTTSSTT
T ss_pred cCCCCCceEEEEecccCChhhhhccccccc-ccccCCCCcceEEEEeCCCCcccCChHHHHHHHHHHHHHHHHhcCCCCc
Confidence 999999999999999999999999995421 1369999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEec--CC--ceeEEeEEEEeeccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCceecCC
Q psy15208 342 LRPDAKSQVTLRYD--NG--KPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFVIGGP 416 (1027)
Q Consensus 342 ~~pd~k~qv~~~y~--~~--~~~~~~~~~~s~qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~~ggp 416 (1027)
|||||||||||+|+ +| +|+||+||||||||++++++++||++|+|+||++|+|++|+ ++|+||||||||||||||
T Consensus 177 lrPD~KtQVTveY~~~~~~~~P~rv~tvviS~QH~~~v~~~~lr~~i~e~vi~~v~p~~~ld~~t~~~INPtGrFviGGP 256 (396)
T 2p02_A 177 LRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGP 256 (396)
T ss_dssp EEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEECSSCCHHHHHHHHHHTTHHHHSCGGGCCTTCEEEESTTSCCCSCGG
T ss_pred cCCCcceEEEEEEEcCCCCcCceEEeEEEEeecCCCCCCHHHHHHHHHHHHHHHhcChhhcCCCeEEEECCCCCcccCCC
Confidence 99999999999998 88 99999999999999999999999999999999999999888 579999999999999999
Q ss_pred CCccccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEEEeec
Q psy15208 417 KGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIMVTSF 496 (1027)
Q Consensus 417 ~~d~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~v~~~ 496 (1027)
+||||||||||||||||||++|||||||||||||||||||||||||||||||||||+|||||||||||+++|+||+||||
T Consensus 257 ~gDaGLTGRKIIVDTYGG~~~HGGGAFSGKDptKVDRSaAYaAR~vAKniVaAGLA~rc~VQlsYAIGva~PvSi~Vdtf 336 (396)
T 2p02_A 257 QGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHY 336 (396)
T ss_dssp GTSCEETTSCTTTTTTTTSSCCCSCCCTTBCTTCHHHHHHHHHHHHHHHHHHTTSCSEEEEEEEECBTCCSCSEEEEECT
T ss_pred cccccccCceEEEEcCCCccCCCCcccCCCCccccchhhHHHHHHHHHHHHhhccCCeeEEEEEeecCcccccEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHh
Q psy15208 497 GSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAE 557 (1027)
Q Consensus 497 ~t~~~~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~ 557 (1027)
||+++++++|.++|+++|||||++||++|+|+||||++||+||||||+ +||||++||++
T Consensus 337 GT~~~~~~~i~~~v~~~FdlrP~~Ii~~L~L~~PiY~~tAaYGHFGr~--~fpWE~~d~~~ 395 (396)
T 2p02_A 337 GTSQKSERELLEIVKKNFDLRPGVIVRDLDLKKPIYQRTAAYGHFGRD--SFPWEVPKKLK 395 (396)
T ss_dssp TCCSSCHHHHHHHHHHHCCCCHHHHHHHHTTTSSCGGGGSSSCSSSST--TCGGGSCCCCC
T ss_pred CCCCCCHHHHHHHHHHHcCCCHHHHHHhcCCCCCcchhhccccCcCCC--CCCcccccccC
Confidence 999999999999999999999999999999999999999999999997 69999999875
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-137 Score=1176.60 Aligned_cols=462 Identities=64% Similarity=1.027 Sum_probs=453.4
Q ss_pred CCceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCCC
Q psy15208 563 ADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYST 642 (1027)
Q Consensus 563 ~~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~st 642 (1027)
.+|+||||+||++|+++|+||++|||+||++|++|+++|||||+||++|||||+|||+|+|||+++||||+|||||||||
T Consensus 3 ~~~~v~d~~la~~G~~~i~~ae~~MP~L~~~r~~~~~~kPl~G~rI~~~lH~t~~TavlietL~a~GAev~~~~cN~~ST 82 (464)
T 3n58_A 3 GSMVVKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFST 82 (464)
T ss_dssp --CEESCGGGHHHHHHHHHHHHTTCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTCC
T ss_pred CCccccCchhHHHHHHHHHHHHhhCHHHHHHHHHHhccCCCCCCEEEEEEecHHHHHHHHHHHHHcCCeEEEecCCCCCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhccccccccccCCCCCChhH
Q psy15208 643 QDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEE 722 (1027)
Q Consensus 643 qd~~aaal~~~g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~~~~~~~~~~~~ 722 (1027)
||||||||++.|||||||||||.||||||++++|+|+++ ++|||||||||||++++|+|.++|++...++.|.++|+
T Consensus 83 qd~~aaal~~~gi~v~A~kget~eey~~~~~~~l~~~~~---~~p~~ilDDGgDl~~~~h~~~~~~~~~~~~~~~~~~~~ 159 (464)
T 3n58_A 83 QDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDG---EPSNMILDDGGDATMYILIGARAEAGEDVLSNPQSEEE 159 (464)
T ss_dssp CHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHTTCCTTS---CCCSEEEESSSHHHHHHHHHHHHHTTCCCSSSCCSHHH
T ss_pred cHHHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHHcccCC---CCCCEEEECchHHHHHHHhhhhhhcccccCCCCCcHHH
Confidence 999999999999999999999999999999999999876 68999999999999999999999999988888999999
Q ss_pred HHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHHhh
Q psy15208 723 VCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKR 802 (1027)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r 802 (1027)
++++..|++.+..+|++||+++++|+|++|||||||+||++|+++|.|+|||||||||.+|++|||+|||++|++++++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~G~~EeTtTGv~rL~~m~~~g~L~~PvinVnds~tK~~fDn~yG~~eslvdgI~R 239 (464)
T 3n58_A 160 EVLFAQIKKRMAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRR 239 (464)
T ss_dssp HHHHHHHHHHHHHSTTHHHHHHHHCCEEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCcchhHHHHhhccceeeccccchHHHHHHHHcCCCCCCEEeeccHhhhhhhhhhhcchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHH
Q psy15208 803 ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHD 882 (1027)
Q Consensus 803 ~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~ 882 (1027)
.++.++.||+|+|+|||+||+++|++|+++||+|+++|++|.++.+|.++|+++++++++++++|||++++|++++|+.+
T Consensus 240 atg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~atgt~~lI~~e 319 (464)
T 3n58_A 240 GTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTTGNKDVITID 319 (464)
T ss_dssp HHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEECCSSSSSBCHH
T ss_pred hcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEECCCCccccCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCeEEEEecCCCcccchhhhhccceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEehhhHhHHH
Q psy15208 883 HMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQTL 962 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~d~eid~~~l~~~~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~~q~l 962 (1027)
+|+.||+|++|+|+|+++.|||.++|...++.++++++++|.++||+.|+||++||+|||+|++|||++|||+||++|+|
T Consensus 320 ~l~~MK~GAILINvGRgdvEID~~aL~~~~~~~ik~~v~~~~~~~g~~i~lLaeGrlvNL~~a~GhP~~vm~~sf~~Q~l 399 (464)
T 3n58_A 320 HMRKMKDMCIVGNIGHFDNEIQVAALRNLKWTNVKPQVDLIEFPDGKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVL 399 (464)
T ss_dssp HHHHSCTTEEEEECSSSTTTBTCGGGTTSEEEEEETTEEEEECTTSCEEEEEGGGSBHHHHHSCCSCHHHHHHHHHHHHH
T ss_pred HHhcCCCCeEEEEcCCCCcccCHHHHHhCccccccCCeeEEEeCCCCEEEEEeCCceecccCCCCChHHHHhHHHHHHHH
Confidence 99999999999999999999999999887888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCCCCCCCC
Q psy15208 963 AQIELFNNTSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027 (1027)
Q Consensus 963 a~~~l~~~~~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~~~~~~~ 1027 (1027)
|++|||+++++|+++||.||+++||+||++||++||++||+||++|++||++|++||||||||||
T Consensus 400 a~~~l~~~~~~~~~~v~~lP~~lDe~VA~l~L~~~g~~l~~lt~~Q~~yl~~~~~gp~k~~~yry 464 (464)
T 3n58_A 400 GQIELFTRTDAYKNEVYVLPKHLDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEHYRY 464 (464)
T ss_dssp HHHHHHHSGGGCCSSEECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHHTCCTTSCCSCTTCCC
T ss_pred HHHHHHhCccccCCCeeECCHHHHHHHHHHHHHHcCCEeccCCHHHHHHcCCCCCCCCCCccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-124 Score=1072.97 Aligned_cols=426 Identities=60% Similarity=0.942 Sum_probs=414.4
Q ss_pred CceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCCCH
Q psy15208 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYSTQ 643 (1027)
Q Consensus 564 ~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~stq 643 (1027)
+|+||||+||++|+++|+||++|||+||++|++|+++|||||+||++|+|||+|||+|+|||+++||||+||||||||||
T Consensus 2 ~~~v~d~~la~~g~~~i~~a~~~mp~l~~~r~~~~~~~pl~g~ri~~~lh~~~~Ta~l~~tL~~~GA~v~~~~~n~~stq 81 (436)
T 3h9u_A 2 MYKVRDISLAEWGRRELELAENEMPGLMELRREYGPSKPLKGAKIAGCLHMTMQTAVLIETLVELGAEVRWASCNIFSTQ 81 (436)
T ss_dssp -CEESCGGGHHHHHHHHHHHHHHCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTTCC
T ss_pred CccccChhhhHhhhHHHHHHHhhCHHHHHHHHHHhccCCCCCCEEEEEeccHHHHHHHHHHHHHcCCEEEEecCCCCCCc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCcEEEeeCCCHHHHHHHHHHHh-cCCCCCCCcCcceeecccchhhHHhhhccccccccccCCCCCChhH
Q psy15208 644 DHAAAAIASKGIPVFAFKGESISDYWEFNHRIF-DWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEE 722 (1027)
Q Consensus 644 d~~aaal~~~g~~v~a~~~~~~~ey~~~~~~~l-~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~~~~~~~~~~~~ 722 (1027)
|||||||++.|||||||||||.||||||++++| +|+++ ++|||||||||||+.++|
T Consensus 82 d~~aaal~~~gi~v~a~~ge~~~ey~~~~~~~l~~~~~~---~~p~~ilDdGgdl~~~~h-------------------- 138 (436)
T 3h9u_A 82 DHAAAAIAKRGIPVFAWKGETEEEYMWCMKQTLKGFSGD---GYPNMLLDDGGDLTNYVL-------------------- 138 (436)
T ss_dssp HHHHHHHHHTTCCEEECTTCCHHHHHHHHHHTTSCBTTT---BCCSEEEESSSHHHHHHH--------------------
T ss_pred HHHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHHHhcccC---CCCceEeccccHHHHHHH--------------------
Confidence 999999999999999999999999999999999 99887 689999999999999999
Q ss_pred HHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHHhh
Q psy15208 723 VCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIKR 802 (1027)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r 802 (1027)
++||+++++++|++|||||||+||++|.++|.|.+||||||||.+|+.|||.|||++++++++++
T Consensus 139 ---------------~~~~~~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r 203 (436)
T 3h9u_A 139 ---------------DECKELDGKIYGVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR 203 (436)
T ss_dssp ---------------HHC-CCTTTCCCEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH
T ss_pred ---------------HHhHHHHhhccceeeccCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHH
Q psy15208 803 ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHD 882 (1027)
Q Consensus 803 ~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~ 882 (1027)
.++.++.||+|+|+|||+||+++|++|+++|++|+++|++|.++.+|.+.|+++.++++++.++|||++++++.++++.+
T Consensus 204 atg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVVilt~gt~~iI~~e 283 (436)
T 3h9u_A 204 ATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVTTTGNDDIITSE 283 (436)
T ss_dssp HHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEECSSCSCSBCTT
T ss_pred hcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEEEECCCCcCccCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCeEEEEecCCCcccchhhhhcc--ceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEehhhHhH
Q psy15208 883 HMRDMKDQAIVCNIGHFDNEIEVEKLKKY--KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQ 960 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~d~eid~~~l~~~--~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~~q 960 (1027)
+|+.||+|++|+|+|+++.|||.+.+... ++..++++++.|+++||+.|+||++||+|||+|++|||++|||+||++|
T Consensus 284 ~l~~MK~gAIVINvgRg~vEID~~~L~~~~~~~~~ir~~vd~y~~~dg~~I~LLaeGrLvNl~~~~Ghp~~vm~~sf~~q 363 (436)
T 3h9u_A 284 HFPRMRDDAIVCNIGHFDTEIQVAWLKANAKERVEVKPQVDRYTMANGRHIILLAEGRLVNLGCASGHPSFVMSNSFCNQ 363 (436)
T ss_dssp TGGGCCTTEEEEECSSSGGGBCHHHHHHHCSEEEEEETTEEEEECTTSCEEEEEGGGSCHHHHHSCCSCHHHHHHHHHHH
T ss_pred HHhhcCCCcEEEEeCCCCCccCHHHHHhhcCceEeecCCceEEEcCCCCEEEEecCCCeecccCCCCChHHHhhHHHHHH
Confidence 99999999999999999999999999753 6678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCC--CCCCc----EEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCCCCCCCC
Q psy15208 961 TLAQIELFNNTS--NYPIG----IYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027 (1027)
Q Consensus 961 ~la~~~l~~~~~--~~~~g----v~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~~~~~~~ 1027 (1027)
+||++||+++++ +|+++ ||.||+++||+||++||++||++||+||+||++||++|++||||||||||
T Consensus 364 ~la~~~l~~~~~~~~~~~~~~~~v~~lp~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~~~~~g~~~~~~~~~ 436 (436)
T 3h9u_A 364 VLAQIELWTNRDTGKYPRGAKAQVYFLPKKLDEKVAALHLGKLGAKLTKLTPKQAEYINCPVDGPFKPDHYRY 436 (436)
T ss_dssp HHHHHHHHHTTTTTSSCC---CCEEECCHHHHHHHHHHHHHHHTCCCCCCCHHHHHHTTSCTTCCCSCTTCCC
T ss_pred HHHHHHHHhCCCcccCCCCCCceeeeCCHHHHHHHHHHHHHHcCCccccCCHHHHHhcCCCcCCCCCcccCCC
Confidence 999999999986 89999 99999999999999999999999999999999999999999999999999
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-122 Score=1057.39 Aligned_cols=424 Identities=53% Similarity=0.906 Sum_probs=409.6
Q ss_pred cccCCceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCC
Q psy15208 560 KNSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNI 639 (1027)
Q Consensus 560 ~~~~~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~ 639 (1027)
|...+|+||||+||++|+++|+||++|||+||++|++|+++|||+|+||++|+|||+|||+|+|||+++||||+||||||
T Consensus 9 ~~~~~~~v~d~~la~~g~~~i~~a~~~mp~l~~~r~~~~~~~pl~G~ri~~~lH~~~~Ta~l~~tL~~~GA~v~~~~~n~ 88 (435)
T 3gvp_A 9 KGSSDFCVKNIKQAEFGRREIEIAEQEMPALMALRKRAQGEKPLAGAKIVGCTHITAQTAVLMETLGALGAQCRWAACNI 88 (435)
T ss_dssp TSCCCSBCSCGGGHHHHHHHHHHHHHTCHHHHHHHHHHSTTCTTTTCEEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCCccccChhhhHHhHHHHHHHHHhCHHHHHHHHHHhccCCCCCCEEEEEEccHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhCCCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhccccccccccCCCCCC
Q psy15208 640 YSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCS 719 (1027)
Q Consensus 640 ~stqd~~aaal~~~g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~~~~~~~~~ 719 (1027)
|||||||||||++.|||||||||||.||||||++++|+|.+ ++|+|||||||||++++|
T Consensus 89 ~stqd~~aaal~~~gi~v~a~~g~~~~ey~~~~~~~~~~~~----~~p~~ilDdGgdl~~~~h----------------- 147 (435)
T 3gvp_A 89 YSTLNEVAAALAESGFPVFAWKGESEDDFWWCIDRCVNVEG----WQPNMILDDGGDLTHWIY----------------- 147 (435)
T ss_dssp SCCCHHHHHHHHHHTCCEECCTTCCHHHHHHHHHHHHCBTT----BCCSEEEESSSHHHHHHH-----------------
T ss_pred CcChHHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhccC----CCCcEEEecchHHHHHHH-----------------
Confidence 99999999999999999999999999999999999999844 589999999999999999
Q ss_pred hhHHHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHH
Q psy15208 720 EEEVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDG 799 (1027)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~ 799 (1027)
++||+++++++|++|||||||+||++|+++|.|+|||||||||.+|++|||.|||++|++++
T Consensus 148 ------------------~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~vnds~tK~~fDn~yGt~~s~~~g 209 (435)
T 3gvp_A 148 ------------------KKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILDG 209 (435)
T ss_dssp ------------------HHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEECTTCHHHHHHHTHHHHHHHHHHH
T ss_pred ------------------HHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEEecchhhhhhhhhhhhhHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccC
Q psy15208 800 IKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVI 879 (1027)
Q Consensus 800 i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi 879 (1027)
++|.++.++.||+|+|+|||+||+++|++|+++||+|+++|++|.++.+|.++|+++.++++++..+|+||+|+|+++++
T Consensus 210 i~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi~atgt~~lI 289 (435)
T 3gvp_A 210 LKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVITCTGNKNVV 289 (435)
T ss_dssp HHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEECSSCSCSB
T ss_pred HHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEEECCCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh--ccceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEehhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK--KYKWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSF 957 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~--~~~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~sf 957 (1027)
+.++|+.||+|++|+|+|+++.|+|++.+. ..++.++++++.+|.++||++|+||++||+|||+|+ |||++|||+||
T Consensus 290 ~~e~l~~MK~gailINvgrg~~EId~~~L~~~~~~~~~ir~~v~~y~~~dg~~I~LLAeGrLvNl~~~-~hp~~vm~~sf 368 (435)
T 3gvp_A 290 TREHLDRMKNSCIVCNMGHSNTEIDVASLRTPELTWERVRSQVDHVIWPDGKRIVLLAEGRLLNLSCS-TVPTFVLSITA 368 (435)
T ss_dssp CHHHHHHSCTTEEEEECSSTTTTBTGGGGCSTTCEEEEEETTEEEEECTTSCEEEEEGGGSBHHHHHC-CCCHHHHHHHH
T ss_pred CHHHHHhcCCCcEEEEecCCCccCCHHHHHhhcceeEEEEcCeeeEEcCCCcEEEEecCCCEeeecCC-CCcHHHHhHHH
Confidence 999999999999999999999999999886 346778899999999999999999999999999999 59999999999
Q ss_pred HhHHHHHHHHhhcC-CCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCCCC
Q psy15208 958 ANQTLAQIELFNNT-SNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLD 1023 (1027)
Q Consensus 958 ~~q~la~~~l~~~~-~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~~~ 1023 (1027)
++|+||++||++++ ++|+++||.||+++||+||++||++||++||+||+||++||++|++||||||
T Consensus 369 ~~q~la~~~l~~~~~~~~~~~v~~lp~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~~~~~g~~k~~ 435 (435)
T 3gvp_A 369 TTQALALIELYNAPEGRYKQDVYLLPKKMDEYVASLHLPTFDAHLTELTDEQAKYLGLNKNGPFKPN 435 (435)
T ss_dssp HHHHHHHHHHHHCCTTTSCSSEEECCHHHHHHHHHHHGGGGTCCCCCCCHHHHHHHTCCTTCCCSCC
T ss_pred HHHHHHHHHHHhCcccccCCCeeeCCHHHHHHHHHHHHHhcCCEeccCCHHHHHHcCCCCCCCCCCC
Confidence 99999999999986 6899999999999999999999999999999999999999999999999997
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-122 Score=1068.51 Aligned_cols=462 Identities=57% Similarity=0.910 Sum_probs=442.2
Q ss_pred CCceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCCC
Q psy15208 563 ADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYST 642 (1027)
Q Consensus 563 ~~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~st 642 (1027)
.+|+||||+||++|+++|+||++|||+||++|++|+++|||||+||++|||||+|||||+|||+++||||+|||||||||
T Consensus 15 ~~~~v~d~~la~~g~~~i~~a~~~mp~l~~~r~~~~~~~pl~g~ri~~~lh~t~~ta~l~~tl~~~GA~v~~~~~n~~st 94 (488)
T 3ond_A 15 REYKVKDMSQADFGRLEIELAEVEMPGLMASRSEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFST 94 (488)
T ss_dssp CEEEESCGGGHHHHHHHHHHHHHTCHHHHHHHHHHGGGCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTCC
T ss_pred CcccccChhhhHHhhHHHHHHHhhCHHHHHHHHHHhcCCCCCCCEEEEEeccHHHHHHHHHHHHHcCCeEEEecCCCCCC
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhcccccccc---ccCCCCC-
Q psy15208 643 QDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNI---SILSNPC- 718 (1027)
Q Consensus 643 qd~~aaal~~~g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~---~~~~~~~- 718 (1027)
||||||||++.|||||||||||.||||||++++|+|+++ ++|||||||||||++++|+|.+.|.+. +.++.|.
T Consensus 95 qd~~aaa~~~~g~~v~a~~ge~~~ey~~~~~~~l~~~~~---~~p~~i~Ddggd~~~~~h~~~~~~~~~~~~~~~~~~~~ 171 (488)
T 3ond_A 95 QDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPG---GGPDLIVDDGGDTTLLIHEGVKAEEIYEKSGQFPDPDS 171 (488)
T ss_dssp CHHHHHHHHHHTCEEEECTTCCHHHHHHHHHHHHCCCTT---CCCSEEEESSSHHHHHHHHHHHHHHHHHHHCCCCCGGG
T ss_pred cHHHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHHhcccC---CCCCEEEECchHHHHHHHcchhhhcchhhccccCCCCC
Confidence 999999999999999999999999999999999999876 589999999999999999988766543 3455553
Q ss_pred --ChhHHHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhH
Q psy15208 719 --SEEEVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESL 796 (1027)
Q Consensus 719 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~ 796 (1027)
++|+++|+.+|++.+.++|.+||+++++++|+|||||||++||++|+++|.|+|||||||||.+|++|||.|||++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn~yGt~~sl 251 (488)
T 3ond_A 172 TDNAEFKIVLSIIKEGLKTDPKRYHKMKDRVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSL 251 (488)
T ss_dssp CCCHHHHHHHHHHHHHHTTCTTHHHHHHHHCCEEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhhCcchhHHHHhhcceeEecccccHHHHHHHHHcCCCCCceecccchhhhhHhhhhccccHHH
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCc
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~ 876 (1027)
+++++|.++.++.||+|+|+|+|.||+++|++|+++||+|+++|++|.++.++.+.|+++.++++++..+|+|++++|+.
T Consensus 252 ~dgi~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG~~ 331 (488)
T 3ond_A 252 PDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNK 331 (488)
T ss_dssp HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECSSCS
T ss_pred HHHHHHHcCCcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcHHHHhcCCCCeEEEEecCCCcccchhhhhcc---ceeccccceeeeecCC-CcEEEEecCCccccccCCCCCCcce
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKY---KWENIKPQVDHIIFPD-GKKIILLAEGRLVNLGCGTGHPSYV 952 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~~---~~~~~~~~v~~y~~~d-g~~i~LLa~GrlvNl~~~~G~P~~v 952 (1027)
++++.++|+.||++++++|+|+++.|++.+.+... ....+..++..|.+++ ++.+.+|++||+||+++..|||+++
T Consensus 332 ~vl~~e~l~~mk~gaiVvNaG~~~~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lLaeGRIVNlsS~~G~p~~v 411 (488)
T 3ond_A 332 DIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILAEGRLMNLGCATGHPSFV 411 (488)
T ss_dssp CSBCHHHHTTSCTTEEEEESSSTTTTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEEGGGSCHHHHHSCCSCHHH
T ss_pred hhhhHHHHHhcCCCeEEEEcCCCCcccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHHcCCcEEEEecCcccCccc
Confidence 99999999999999999999999989998877654 4566788888899998 9999999999999999999999999
Q ss_pred EehhhHhHHHHHHHHhhcCC--CCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCCCCCCCC
Q psy15208 953 MSSSFANQTLAQIELFNNTS--NYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027 (1027)
Q Consensus 953 md~sf~~q~la~~~l~~~~~--~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~~~~~~~ 1027 (1027)
||+||++|+||+++|++++. +|++|||.||+++||+||++||++||++||+||+||++||++|++||||||||||
T Consensus 412 m~~sfa~Q~la~~~l~~~~~~~~~~~gv~~lp~~ld~~vA~l~l~~~g~~l~~lt~~q~~y~~~~~~g~~k~~~~~y 488 (488)
T 3ond_A 412 MSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYISVPVEGPYKPFHYRY 488 (488)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCCCCSSEECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHTTCCTTSCCSCTTCCC
T ss_pred ccccHHHHHHHHHHHHhCCCccccCCCceeCCHHHHHHHHHHhchhcCCchhhcCHHHHHHcCCCCCCCCCccCCCC
Confidence 99999999999999999876 8999999999999999999999999999999999999999999999999999999
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-101 Score=900.86 Aligned_cols=463 Identities=53% Similarity=0.911 Sum_probs=439.1
Q ss_pred CceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCCCH
Q psy15208 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYSTQ 643 (1027)
Q Consensus 564 ~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~stq 643 (1027)
+|+||||+||++|+++|+||++|||+||++|++|+++|||||+||++|+|||+|||+|+|||+++||||+||||||||||
T Consensus 5 ~~~v~d~~la~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~g~ri~~~lh~~~~ta~l~~tL~~~Ga~v~~~~~n~~stq 84 (479)
T 1v8b_A 5 KSKVKDISLAPFGKMQMEISENEMPGLMRIREEYGKDQPLKNAKITGCLHMTVECALLIETLQKLGAQIRWCSCNIYSTA 84 (479)
T ss_dssp CCBCSCGGGHHHHHHHHHHHGGGCHHHHHHHHHSTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CceecChhhhhHhHHHHHHHHhHCHHHHHHHHHhhccCCCCCCEEEEEeccHHHHHHHHHHHHHCCCEEEEecCCCCCch
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh-CCCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhcccccc---ccccCCCCC-
Q psy15208 644 DHAAAAIAS-KGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAEN---NISILSNPC- 718 (1027)
Q Consensus 644 d~~aaal~~-~g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~---~~~~~~~~~- 718 (1027)
|||||||++ .||+||||||||.||||||++++|+|+++.. ++|||||||||||+.++|+|.++|+ +.+.++.|.
T Consensus 85 d~~aaal~~~~gi~v~a~~g~~~~ey~~~~~~~l~~~~~~~-~~~~~i~ddggd~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (479)
T 1v8b_A 85 DYAAAAVSTLENVTVFAWKNETLEEYWWCVESALTWGDGDD-NGPDMIVDDGGDATLLVHKGVEYEKLYEEKNILPDPEK 163 (479)
T ss_dssp HHHHHHHTTSTTEEEECCTTCCHHHHHHHHHHHHCCSSSSS-CSCSEEEESSSHHHHHHHHHHHHHHHHHHHCCCCCGGG
T ss_pred HHHHHHHhhcCCceEEEeCCCCHHHHHHHHHHHhcCccccc-CCCCEEEeccchHHHHHHcchhhhhccccccccCCccc
Confidence 999999999 7999999999999999999999999975411 3799999999999999999998876 456777775
Q ss_pred --ChhHHHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhH
Q psy15208 719 --SEEEVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESL 796 (1027)
Q Consensus 719 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~ 796 (1027)
+.|+++||..|++.++.+|..+|+++++++|++|||++|+.+|.+|.++|.+.+|+.++|++..+.+++|.++++++.
T Consensus 164 ~~~~~~~~~~~~l~~~la~~~~~~~~l~~~l~gi~eet~~Gvd~l~a~~~~Gilv~p~~~vn~sVae~l~r~~~~~~~~l 243 (479)
T 1v8b_A 164 AKNEEERCFLTLLKNSILKNPKKWTNIAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYDNVYGCRHSL 243 (479)
T ss_dssp CSSHHHHHHHHHHHHHHTTCTTHHHHHHTTCCEEEECSHHHHHHHHHHHHTTCCCSEEEECTTSHHHHTTHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHhhhcChhhHHHHhcCeEEEEEeeCccHhHHHHHHHcCCEEeccCCccHHHHHHHHhchHhHHHHH
Confidence 345699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCc
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~ 876 (1027)
++++.+.++..+.||+|+|+|+|.||+.+|++|+++|++|+++|+++.+..++.+.|+++.+++++++++|+|+.+++++
T Consensus 244 ~~gw~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~~t~ 323 (479)
T 1v8b_A 244 PDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCTGNV 323 (479)
T ss_dssp HHHHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECCSSS
T ss_pred hhhhhhccccccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECCChh
Confidence 99988888888999999999999999999999999999999999999888788899999999999999999999999999
Q ss_pred ccCcHHHHhcCCCCeEEEEecCCCcccchhhhhc---cceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceE
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKK---YKWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVM 953 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~---~~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vm 953 (1027)
++++.++|+.||+|++|+|+|+++.|||.+.+.. +....+...++.|.+|+++.+.+++++++||+++++|||.++|
T Consensus 324 ~lI~~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~a~lDv~plp~~~~l~~l~~~nvv~tH~atghp~e~~ 403 (479)
T 1v8b_A 324 DVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVKPQVDRITLPNGNKIIVLARGRLLNLGCATGHPAFVM 403 (479)
T ss_dssp SSBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEETTEEEEECTTSCEEEEEGGGSBHHHHSSCCSCHHHH
T ss_pred hhcCHHHHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEeeeEEEEECCCCCeeeEecCCCEEEEeccCCCCchhH
Confidence 9999999999999999999999999999998866 3555666888889888899999999999999999999999999
Q ss_pred ehhhHhHHHHHHHHhhcCC--CCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCCCCCCCC
Q psy15208 954 SSSFANQTLAQIELFNNTS--NYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027 (1027)
Q Consensus 954 d~sf~~q~la~~~l~~~~~--~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~~~~~~~ 1027 (1027)
+.+|+.|++++.+++.+++ ++.++|+.||+.+|++||++||++||+.+++||++|.+|++...+||||||||||
T Consensus 404 ~~s~a~~~~~ni~~~~~g~~~~l~n~V~~lp~~~de~va~l~L~~lG~~l~~lt~~q~~yi~v~~~g~~~~~~~~~ 479 (479)
T 1v8b_A 404 SFSFCNQTFAQLDLWQNKDTNKYENKVYLLPKHLDEKVALYHLKKLNASLTELDDNQCQFLGVNKSGPFKSNEYRY 479 (479)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSSCCSSEECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHHTCCTTSCCSCTTCCC
T ss_pred HHHHHHHHHHHHHHHHcCCCCcCCcceEeCChhhHHHHHHHHHHHcCChHhhcChhhhhhEeeeeCCCCCcccCCC
Confidence 9999999999999998888 8999999999999999999999999999999999999999999999999999999
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-100 Score=898.73 Aligned_cols=461 Identities=57% Similarity=0.902 Sum_probs=435.9
Q ss_pred CCceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCCC
Q psy15208 563 ADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYST 642 (1027)
Q Consensus 563 ~~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~st 642 (1027)
.+|+||||+||++|+++|+|||+|||+||++|++|+++|||||+||++|+|||+|||+|+|||+++||||+|||||||||
T Consensus 18 ~~~~v~d~~la~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~g~~i~~~~h~~~~ta~l~~~l~~~ga~v~~~~~n~~st 97 (494)
T 3ce6_A 18 IDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFST 97 (494)
T ss_dssp EEEBCSCGGGHHHHHHHHHHHHHHCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTCC
T ss_pred CceeecChhhhHHhHHHHHHHHHHCHHHHHHHHHhhccCCCCCCEEEEEeecHHHHHHHHHHHHHCCCeEEEeecCCCCc
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhC---------CCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCc-ceeecccchhhHHhhhccccccccc
Q psy15208 643 QDHAAAAIASK---------GIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQA-NMILDDGGDATFLLHLGAQAENNIS 712 (1027)
Q Consensus 643 qd~~aaal~~~---------g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p-~~i~DdGgdl~~~~~~~~~~~~~~~ 712 (1027)
||||||||++. |||||||||||.||||||++++|+|+++ .+| ||||||||||++++|+|.++|++ +
T Consensus 98 qd~~aaa~~~~~~~~~~~~~g~~v~a~~g~~~~~y~~~~~~~~~~~~~---~~~~~~i~ddggd~~~~~~~~~~~~~~-~ 173 (494)
T 3ce6_A 98 QDHAAAAVVVGPHGTPDEPKGVPVFAWKGETLEEYWWAAEQMLTWPDP---DKPANMILDDGGDATMLVLRGMQYEKA-G 173 (494)
T ss_dssp CHHHHHHHHHCSSCCSSSCCSCCEECCTTCCHHHHHHHHHHHHCCSST---TSCCCEEEESSSHHHHHHHHHHHHHHH-T
T ss_pred hHHHHHHHhhhccccccCCCCeEEEEeCCCCHHHHHHHHHHHHhcccc---CCCceEEeecchHHHHHHHcchhhhcc-c
Confidence 99999999999 9999999999999999999999999764 257 99999999999999999999996 7
Q ss_pred cCCCCCCh---hHHHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccc
Q psy15208 713 ILSNPCSE---EEVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNL 789 (1027)
Q Consensus 713 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~ 789 (1027)
.++.|.++ |+++|+.+|++.++.+|..||+++.++.|++|+|++||.|+++|.+.|.+.+|++++|++.+|..|+|.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~i~GvveetgtGVd~l~a~~~~Gilv~~~~~vn~sVae~~~r~l 253 (494)
T 3ce6_A 174 VVPPAEEDDPAEWKVFLNLLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSKFDNK 253 (494)
T ss_dssp SCCCCCTTSCHHHHHHHHHHHHHHHHCSSHHHHHHHHCCCEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHH
T ss_pred ccCCcccCchHHHHHHHHHHHHHhhcCcccchhhhcCeEEEEEEeCCChhHHHHHHHcCCEEEecCCccHHHHHHHHhhh
Confidence 88888743 679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 790 YGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 790 ~g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
|+++++.|+++.+.++..+.|++|+|+|+|+||+.+|++|+++|++|+++|+++.++.+|.+.|+++.++++++..+|+|
T Consensus 254 ~~~~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvV 333 (494)
T 3ce6_A 254 YGTRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIV 333 (494)
T ss_dssp HHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEE
T ss_pred hhhhhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEE
Confidence 99999999999888887899999999999999999999999999999999999999889999999988999999999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhhc--cceeccccceeeeecCC-CcEEEEecCCccccccCCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKK--YKWENIKPQVDHIIFPD-GKKIILLAEGRLVNLGCGT 946 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~--~~~~~~~~~v~~y~~~d-g~~i~LLa~GrlvNl~~~~ 946 (1027)
|+|+|+.++++.++|+.||+|++++|+|+++.++|.+.+.. +....+....+.+.+++ ++.+.+|++|+++||++.+
T Consensus 334 i~atgt~~~i~~~~l~~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~~~ldv~~~~~~~~~l~LL~~grlvnL~~~T 413 (494)
T 3ce6_A 334 VTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLERSGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNAT 413 (494)
T ss_dssp EECSSSSCSBCHHHHHHSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEETTEEEEECTTTCCEEEEEGGGSCHHHHHSC
T ss_pred EECCCCHHHHHHHHHHhcCCCcEEEEeCCCCCccCHHHHHHhhhccceEEEEEEEeecCCcchHHHHHhCCCEEeccCCC
Confidence 99999999999888999999999999999988888887754 23345556666677777 8999999999999999999
Q ss_pred CCCcceEehhhHhHHHHHHHHhhcCCCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCCCCCCC
Q psy15208 947 GHPSYVMSSSFANQTLAQIELFNNTSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYR 1026 (1027)
Q Consensus 947 G~P~~vmd~sf~~q~la~~~l~~~~~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~~~~~~ 1026 (1027)
+||..+|+.+|..|++.+.+.+.+++.+.+.|+.+|+++|+.||++||.+||++|++||++|++||+...+|||||||||
T Consensus 414 PH~a~~~~~s~~~qa~~ai~~~~~g~~~~~~V~~~P~~~De~vA~lhL~~lg~~l~~lt~~q~~y~~v~~~G~~k~~~~~ 493 (494)
T 3ce6_A 414 GHPSFVMSNSFANQTIAQIELWTKNDEYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYR 493 (494)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTGGGCCSSEECCCHHHHHHHHHHHHHHHTCCCCCCCHHHHHHHTCCTTSCCSCTTCC
T ss_pred CCccccchHHHHHHHHHHHHHHHcCCCCCCEEEECHHHHHHHHHHhhHHHHHHHHHHhChhHHHHcccccCCCCCcccCC
Confidence 99999999999999999999998877888999999999999999999999999999999999999999999999999999
Q ss_pred C
Q psy15208 1027 Y 1027 (1027)
Q Consensus 1027 ~ 1027 (1027)
|
T Consensus 494 ~ 494 (494)
T 3ce6_A 494 Y 494 (494)
T ss_dssp C
T ss_pred C
Confidence 9
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-97 Score=867.32 Aligned_cols=463 Identities=71% Similarity=1.176 Sum_probs=443.8
Q ss_pred cCCceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCC
Q psy15208 562 SADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYS 641 (1027)
Q Consensus 562 ~~~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~s 641 (1027)
..+|+||||+||++|+++|+||++|||+||++|++|+++|||+|+||++|+|||+|||+|+|||+++||+|+||||||||
T Consensus 32 ~~~~~v~d~~la~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~ri~~~lh~~~~ta~li~tL~~~GA~V~~~~~n~~s 111 (494)
T 3d64_A 32 AQDYVVADIALAGWGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIFS 111 (494)
T ss_dssp -CCCBCSCGGGHHHHHHHHHHHGGGCHHHHHHHHHTTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSSSC
T ss_pred CCCceecchhhhhHhHHHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEeCCcHHHHHHHHHHHhCCCEEEEEecCCcc
Confidence 34899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhCCCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhccccccccccCCCCCChh
Q psy15208 642 TQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEE 721 (1027)
Q Consensus 642 tqd~~aaal~~~g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~~~~~~~~~~~ 721 (1027)
||||+||||++.||+||||||||.||||||++++|+|+++ .+|++|+|||||++.++|+|..+|++.+.++.|.+.+
T Consensus 112 tqd~~aaal~~~gi~v~a~kget~~ey~~~~~~~l~~~~~---~~p~~i~Ddggd~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (494)
T 3d64_A 112 TQDHAAAAIVEAGTPVFAFKGESLDEYWEFSHRIFEWPNG---EFANMILDDGGDATLLLILGSKAEKDRSVIARPTNEE 188 (494)
T ss_dssp CCHHHHHHHHHTTCCEECCTTCCHHHHHHHHHHTTCCSTT---CCCCEEEESSSHHHHHHHHHHHHHHCGGGGTCCCSHH
T ss_pred cchHHHHHHHhCCceEEEecCCCHHHHHHHHHHHhccccC---CCCceeecCCcceeehhhccchhhccccccCCccchh
Confidence 9999999999999999999999999999999999999876 5899999999999999999999999888999988777
Q ss_pred HHHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHHh
Q psy15208 722 EVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIK 801 (1027)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~ 801 (1027)
++++|..|.+.+..+|..|++++++++|++|||++|+.+|.+|.++|.+-+|+.++|+|..+.+|+|.|+++++.++++.
T Consensus 189 ~~~l~~~l~~~la~~~~~~~~l~~~l~gi~eet~~Gvd~l~a~~~~Gilv~n~~~vn~sVae~l~r~~~~~~~~l~~gw~ 268 (494)
T 3d64_A 189 EVALFKSIERHLEIDGSWYSKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDNLYGCRESLVDGIK 268 (494)
T ss_dssp HHHHHHHHHHHHTTCTTTTHHHHTTCCCEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHhhccChHhHHHHhhCcEEEEEEcccCHhhHHHHHHCCCEEEECCCccHHHHHHHHhhhHhhhhhhhhhhh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcH
Q psy15208 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITH 881 (1027)
Q Consensus 802 r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~ 881 (1027)
+.++..+.||+|+|+|+|.||+.+|++|+++|++|+++|+++.+..++.+.|+++.+++++++++|+|+.+++++++|+.
T Consensus 269 ~~~g~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~~t~~lI~~ 348 (494)
T 3d64_A 269 RATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATGNYHVINH 348 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECSSSSCSBCH
T ss_pred hccccccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECCCcccccCH
Confidence 88888899999999999999999999999999999999999988778888999999999999999999999999999999
Q ss_pred HHHhcCCCCeEEEEecCCCcccchhhhhccceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEehhhHhHH
Q psy15208 882 DHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQT 961 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d~eid~~~l~~~~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~~q~ 961 (1027)
++|+.||+|++|+|+|+++.+||.+.|..+....+...++.|.+|+++.+.+++++++||+.+++|||.++|+.+|+.|+
T Consensus 349 ~~l~~MK~gAilINvgrg~veID~~aL~AL~~g~I~~~~Dv~plp~~~pL~~l~~~nvv~tH~atg~~~~~~~~~~a~~~ 428 (494)
T 3d64_A 349 DHMKAMRHNAIVCNIGHFDSEIDVASTRQYQWENIKPQVDHIIFPDGKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQT 428 (494)
T ss_dssp HHHHHCCTTEEEEECSSSSCSBCCGGGTTSEEEEEETTEEEEECTTSCEEEEEGGGSBHHHHTSCCSCHHHHHHHHHHHH
T ss_pred HHHhhCCCCcEEEEcCCCcchhchHHHHhhhcCccceeEEEEECCCCCchhhcCCCCEEEEeCcCCCCHHHHHHHHHHHH
Confidence 99999999999999999998889888855566667788888988889999999999999999899999999999999999
Q ss_pred HHHHHHhhcCCCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCCCCCCCC
Q psy15208 962 LAQIELFNNTSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027 (1027)
Q Consensus 962 la~~~l~~~~~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~~~~~~~ 1027 (1027)
+++.+++.+++++.+.|+.+|+++|++||++||++||+.+++||++|.+|++...+||||||||||
T Consensus 429 ~~ni~~~~~g~~~~n~V~~lp~~~d~~va~l~L~~~g~~~~~l~~~q~~y~~v~~~g~~~~~~~~~ 494 (494)
T 3d64_A 429 LAQIELFTRGGEYANKVYVLPKHLDEKVARLHLARIGAQLSELSDDQAAYIGVSKAGPFKPDHYRY 494 (494)
T ss_dssp HHHHHHHHHGGGSCSSEEECCHHHHHHHHHHHHTTTTCCCCCCCHHHHHHHTCCTTSCCSCTTCCC
T ss_pred HHHHHHHHcCCCCCCceeeCChhHHHHHHHHHHHHcCChHHhhChhhHHhEeeccCCCCCcccCCC
Confidence 999999988888999999999999999999999999999999999999999999999999999999
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.87 E-value=8e-21 Score=195.46 Aligned_cols=171 Identities=37% Similarity=0.650 Sum_probs=146.1
Q ss_pred CceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 3 SNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 3 m~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
+..+.+.+.+.+|+++++++.|++ .+++|+|||+||+++++++..+..|..+++.|+++||.|+++|+||+|.|.+.
T Consensus 4 ~~~~~~~~~~~~g~l~~~~~~p~~---~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 80 (208)
T 3trd_A 4 MTNEDFLIQGPVGQLEVMITRPKG---IEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGR 80 (208)
T ss_dssp CSSSCEEEECSSSEEEEEEECCSS---CCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC
T ss_pred cccceEEEECCCceEEEEEEcCCC---CCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCC
Confidence 445567899999999999998875 24689999999976656676667788999999999999999999999999887
Q ss_pred CCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC---CCCCCCcEEEE
Q psy15208 83 YDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL---IPEVPKNTIII 159 (1027)
Q Consensus 83 ~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~---l~~i~~PvLiI 159 (1027)
+........|+.++++++...++..+++++||||||.+++.++ .+| +++++|+++|....+. +...++|++++
T Consensus 81 ~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~---~v~~~v~~~~~~~~~~~~~~~~~~~p~l~i 156 (208)
T 3trd_A 81 YDNGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ---KVAQLISVAPPVFYEGFASLTQMASPWLIV 156 (208)
T ss_dssp CCTTTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS---CCSEEEEESCCTTSGGGTTCCSCCSCEEEE
T ss_pred ccchHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC---CccEEEEeccccccCCchhhhhcCCCEEEE
Confidence 5556678999999999999988778999999999999999999 666 4999999999877653 44567999999
Q ss_pred EeCCCCCCChHHHHhhhCCCC
Q psy15208 160 HGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 160 hG~~D~iVP~~~~~~l~~~~~ 180 (1027)
||++|.++|++.+..+.+.+.
T Consensus 157 ~g~~D~~~~~~~~~~~~~~~~ 177 (208)
T 3trd_A 157 QGDQDEVVPFEQVKAFVNQIS 177 (208)
T ss_dssp EETTCSSSCHHHHHHHHHHSS
T ss_pred ECCCCCCCCHHHHHHHHHHcc
Confidence 999999999999988866544
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-20 Score=192.96 Aligned_cols=174 Identities=32% Similarity=0.617 Sum_probs=147.9
Q ss_pred CCCceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q psy15208 1 MISNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS 80 (1027)
Q Consensus 1 M~m~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~ 80 (1027)
|++..+.+.+.+.+|++.++++.|++.. ...+|+|||+||+++++++..+..|..+++.|+++||.|+++|+||+|.|.
T Consensus 6 ~~~~~~~~~~~~~~g~~~~~~~~p~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~ 84 (220)
T 2fuk_A 6 FPTESAALTLDGPVGPLDVAVDLPEPDV-AVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSA 84 (220)
T ss_dssp CCSSCEEEEEEETTEEEEEEEECCCTTS-CCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCC
T ss_pred ccccceEEEEeCCCCeEEEEEEeCCCCC-ccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCC
Confidence 4567788999999999999999997610 034899999999877677766667889999999999999999999999998
Q ss_pred CCCCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCCCC--CCCCcEEE
Q psy15208 81 GTYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWLIP--EVPKNTII 158 (1027)
Q Consensus 81 g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~l~--~i~~PvLi 158 (1027)
+.+........|+.++++++....+..+++++||||||.+++.++.++ +++++|+++|....+... ....|+++
T Consensus 85 ~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~v~~~v~~~~~~~~~~~~~~~~~~p~l~ 160 (220)
T 2fuk_A 85 GSFDHGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL----EPQVLISIAPPAGRWDFSDVQPPAQWLV 160 (220)
T ss_dssp SCCCTTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH----CCSEEEEESCCBTTBCCTTCCCCSSEEE
T ss_pred CCcccCchhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc----cccEEEEecccccchhhhhcccCCcEEE
Confidence 776555678999999999999987777899999999999999999987 489999999987654322 23589999
Q ss_pred EEeCCCCCCChHHHHhhhCCC
Q psy15208 159 IHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 159 IhG~~D~iVP~~~~~~l~~~~ 179 (1027)
+||++|.++|++.+..+.+.+
T Consensus 161 i~g~~D~~~~~~~~~~~~~~~ 181 (220)
T 2fuk_A 161 IQGDADEIVDPQAVYDWLETL 181 (220)
T ss_dssp EEETTCSSSCHHHHHHHHTTC
T ss_pred EECCCCcccCHHHHHHHHHHh
Confidence 999999999999999888876
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.6e-19 Score=190.40 Aligned_cols=166 Identities=32% Similarity=0.562 Sum_probs=139.9
Q ss_pred EEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCc
Q psy15208 7 FFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSG 86 (1027)
Q Consensus 7 ~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~ 86 (1027)
++.+.+++|++.++++.|.+ +++|+|||+||++..+++..+..|..+++.|+++||.|+++|+||+|.|.+.+...
T Consensus 25 ~~~~~~~~g~l~~~~~~p~~----~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~ 100 (249)
T 2i3d_A 25 EVIFNGPAGRLEGRYQPSKE----KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHG 100 (249)
T ss_dssp EEEEEETTEEEEEEEECCSS----TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCSS
T ss_pred EEEEECCCceEEEEEEcCCC----CCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCc
Confidence 67888999999999888865 46789999999876666766667789999999999999999999999998765433
Q ss_pred cchHHHHHHHHHHHHHhCCC-CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC---CCCCCCCcEEEEEeC
Q psy15208 87 NGETDDMEILLRYIQKKYPY-LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---LIPEVPKNTIIIHGE 162 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~-~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---~l~~i~~PvLiIhG~ 162 (1027)
.....|+.++++++...... .+++|+||||||.+++.++.++|+ ++++|+++|....+ .+..+.+|+++++|+
T Consensus 101 ~~~~~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~~~~~~~~~~~~~P~lii~G~ 177 (249)
T 2i3d_A 101 AGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE---IEGFMSIAPQPNTYDFSFLAPCPSSGLIINGD 177 (249)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT---EEEEEEESCCTTTSCCTTCTTCCSCEEEEEET
T ss_pred cchHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC---ccEEEEEcCchhhhhhhhhcccCCCEEEEEcC
Confidence 34569999999999887543 379999999999999999999886 89999999986644 356788999999999
Q ss_pred CCCCCChHHHHhhhCCC
Q psy15208 163 LDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 163 ~D~iVP~~~~~~l~~~~ 179 (1027)
+|.++|++....+.+.+
T Consensus 178 ~D~~~~~~~~~~~~~~~ 194 (249)
T 2i3d_A 178 ADKVAPEKDVNGLVEKL 194 (249)
T ss_dssp TCSSSCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH
Confidence 99999999888766543
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-19 Score=191.89 Aligned_cols=167 Identities=19% Similarity=0.277 Sum_probs=131.2
Q ss_pred EEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--
Q psy15208 7 FFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD-- 84 (1027)
Q Consensus 7 ~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~-- 84 (1027)
.+.+...+.+++++++.|++. .++.|+|||+||++ ++.....|..+++.|+++||+|+++|+||||.|.+...
T Consensus 3 ~~~~~~~g~~l~~~~~~p~~~--~~~~p~vvl~HG~~---~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~ 77 (251)
T 2wtm_A 3 AMYIDCDGIKLNAYLDMPKNN--PEKCPLCIIIHGFT---GHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFEDH 77 (251)
T ss_dssp EEEEEETTEEEEEEEECCTTC--CSSEEEEEEECCTT---CCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGC
T ss_pred ceEEecCCcEEEEEEEccCCC--CCCCCEEEEEcCCC---cccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCccccC
Confidence 456666556899999988741 13578899999974 33223468899999999999999999999999986432
Q ss_pred CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-------------C---C
Q psy15208 85 SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-------------W---L 148 (1027)
Q Consensus 85 ~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-------------~---~ 148 (1027)
+....+.|+.++++++.......+++|+||||||.+++.+|.++|+ +++++|+++|.... + .
T Consensus 78 ~~~~~~~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (251)
T 2wtm_A 78 TLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERD--IIKALIPLSPAAMIPEIARTGELLGLKFDPEN 155 (251)
T ss_dssp CHHHHHHHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTT--TEEEEEEESCCTTHHHHHHHTEETTEECBTTB
T ss_pred CHHHHHHHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcc--cceEEEEECcHHHhHHHHhhhhhccccCCchh
Confidence 3456788999999998765434589999999999999999999998 79999999985210 0 0
Q ss_pred -----------------------------CCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 149 -----------------------------IPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 149 -----------------------------l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
+..+++|+|++||++|.++|++.+..+.+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~ 216 (251)
T 2wtm_A 156 IPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYK 216 (251)
T ss_dssp CCSEEEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHSS
T ss_pred cchHHhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhCC
Confidence 12357999999999999999999887776554
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.6e-19 Score=190.04 Aligned_cols=170 Identities=18% Similarity=0.265 Sum_probs=137.8
Q ss_pred EEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-
Q psy15208 6 KFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD- 84 (1027)
Q Consensus 6 ~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~- 84 (1027)
+.+.+...+.+++++.+.|.+ .++|+|||+||++ ++.....|..+++.|+++||.|+++|+||||.|.+...
T Consensus 23 ~~~~~~~~g~~l~~~~~~p~~----~~~p~vv~~HG~~---~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~ 95 (270)
T 3pfb_A 23 ATITLERDGLQLVGTREEPFG----EIYDMAIIFHGFT---ANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFEN 95 (270)
T ss_dssp EEEEEEETTEEEEEEEEECSS----SSEEEEEEECCTT---CCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGG
T ss_pred eEEEeccCCEEEEEEEEcCCC----CCCCEEEEEcCCC---CCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCCCc
Confidence 445666655689999998875 4588999999974 33334468899999999999999999999999986532
Q ss_pred -CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC----------------
Q psy15208 85 -SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---------------- 147 (1027)
Q Consensus 85 -~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---------------- 147 (1027)
+....++|+.++++++....+..+++|+||||||.+++.++.++|+ +++++|+++|.....
T Consensus 96 ~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (270)
T 3pfb_A 96 MTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPD--LIKKVVLLAPAATLKGDALEGNTQGVTYNPD 173 (270)
T ss_dssp CCHHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTT--TEEEEEEESCCTHHHHHHHHTEETTEECCTT
T ss_pred cCHHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCch--hhcEEEEeccccccchhhhhhhhhccccCcc
Confidence 3456789999999999887666789999999999999999999998 799999999864200
Q ss_pred ----------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceE
Q psy15208 148 ----------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVV 184 (1027)
Q Consensus 148 ----------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L 184 (1027)
.+..+.+|+++++|++|.++|++.+..+.+......+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 238 (270)
T 3pfb_A 174 HIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQNSTL 238 (270)
T ss_dssp SCCSEEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCSSEEE
T ss_pred cccccccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhCCCCeE
Confidence 1456789999999999999999998888776543333
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4.2e-18 Score=181.42 Aligned_cols=161 Identities=20% Similarity=0.312 Sum_probs=133.4
Q ss_pred EEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---C
Q psy15208 9 NINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---D 84 (1027)
Q Consensus 9 ~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---~ 84 (1027)
.+.+.+| ++++..+.|.+ .++|+|||+||++. +.. .|..+++.|+++||+|+++|+||||.|.+.. .
T Consensus 21 ~~~~~~g~~l~~~~~~~~~----~~~~~vv~~hG~~~---~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 91 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTG----TPKALIFVSHGAGE---HSG--RYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVS 91 (303)
T ss_dssp EEECTTSCEEEEEEECCSS----CCSEEEEEECCTTC---CGG--GGHHHHHHHHHTTEEEEEECCTTSTTSCSSTTCCS
T ss_pred eEecCCCeEEEEEEeccCC----CCCeEEEEECCCCc---hhh--HHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCCCCC
Confidence 4566677 89998888875 46789999999743 322 5788999999999999999999999998543 2
Q ss_pred CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-----------------
Q psy15208 85 SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW----------------- 147 (1027)
Q Consensus 85 ~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~----------------- 147 (1027)
+....++|+.++++++....+..+++|+||||||.+++.++.++|+ +++++|+++|.....
T Consensus 92 ~~~~~~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (303)
T 3pe6_A 92 DFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPG--HFAGMVLISPLVLANPESATTFKVLAAKVLNS 169 (303)
T ss_dssp STHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTT--TCSEEEEESCSSSBCHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcc--cccEEEEECccccCchhccHHHHHHHHHHHHH
Confidence 4456789999999999988877799999999999999999999998 799999999863210
Q ss_pred -----------------------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHh
Q psy15208 148 -----------------------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFL 174 (1027)
Q Consensus 148 -----------------------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~ 174 (1027)
.+..+++|+++++|++|.++|++....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 249 (303)
T 3pe6_A 170 VLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYL 249 (303)
T ss_dssp TCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBCHHHHHH
T ss_pred hcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCChHHHHH
Confidence 135578999999999999999999887
Q ss_pred hhCCCC
Q psy15208 175 WANPLD 180 (1027)
Q Consensus 175 l~~~~~ 180 (1027)
+.+.+.
T Consensus 250 ~~~~~~ 255 (303)
T 3pe6_A 250 LMELAK 255 (303)
T ss_dssp HHHHCC
T ss_pred HHHhcc
Confidence 777654
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.79 E-value=8.1e-19 Score=191.18 Aligned_cols=140 Identities=19% Similarity=0.308 Sum_probs=115.0
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
.++.|||+||++ ++.. .|+.+++.|+++||+|+++|+||||.|++.. .+...++.|+.++++++.... .++
T Consensus 50 ~~~~VlllHG~~---~s~~--~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~~~l~~~~--~~v 122 (281)
T 4fbl_A 50 SRIGVLVSHGFT---GSPQ--SMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTADIVAAMRWLEERC--DVL 122 (281)
T ss_dssp SSEEEEEECCTT---CCGG--GGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHTCCHHHHHHHHHHHHHHHHHHC--SEE
T ss_pred CCceEEEECCCC---CCHH--HHHHHHHHHHHCCCEEEEECCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhCC--CeE
Confidence 345689999984 3433 4788999999999999999999999997421 345667899999999998764 379
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC------------------------------------------
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------------------------------------------ 147 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------------------------------------------ 147 (1027)
+|+||||||.+++.+|.++|+ +++++|+++|+....
T Consensus 123 ~lvG~S~GG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (281)
T 4fbl_A 123 FMTGLSMGGALTVWAAGQFPE--RFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTPVPAI 200 (281)
T ss_dssp EEEEETHHHHHHHHHHHHSTT--TCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEEGGGH
T ss_pred EEEEECcchHHHHHHHHhCch--hhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCchHHH
Confidence 999999999999999999999 799999999853210
Q ss_pred ------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 148 ------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 148 ------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
.+.++++|+|++||++|.++|++.+..+++.+.
T Consensus 201 ~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~ 245 (281)
T 4fbl_A 201 KHLITIGAVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIG 245 (281)
T ss_dssp HHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCC
T ss_pred HHHHHhhhhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCC
Confidence 035678999999999999999999988877654
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=7.5e-18 Score=185.77 Aligned_cols=161 Identities=20% Similarity=0.310 Sum_probs=134.3
Q ss_pred EEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---C
Q psy15208 9 NINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---D 84 (1027)
Q Consensus 9 ~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---~ 84 (1027)
.+.+.+| ++++..+.|.+ .++|+|||+||++. +.. .|..+++.|+++||.|+++|+||||.|.+.. .
T Consensus 39 ~~~~~dg~~l~~~~~~p~~----~~~p~vv~~HG~~~---~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~ 109 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPTG----TPKALIFVSHGAGE---HSG--RYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVS 109 (342)
T ss_dssp EEECTTSCEEEEEEECCSS----CCSEEEEEECCTTC---CGG--GGHHHHHHHHTTTEEEEEECCTTSTTSCSSTTCCS
T ss_pred eEEccCCeEEEEEEeCCCC----CCCcEEEEECCCCc---ccc--hHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCCCcC
Confidence 5667777 89999988875 46789999999743 322 5788999999999999999999999998643 3
Q ss_pred CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-----------------
Q psy15208 85 SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW----------------- 147 (1027)
Q Consensus 85 ~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~----------------- 147 (1027)
+....++|+.++++++...++..+++|+||||||.+++.++.++|+ +++++|+++|.....
T Consensus 110 ~~~~~~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (342)
T 3hju_A 110 DFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPG--HFAGMVLISPLVLANPESATTFKVLAAKVLNL 187 (342)
T ss_dssp CTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTT--TCSEEEEESCCCSCCTTTTSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCcc--ccceEEEECcccccchhhhhHHHHHHHHHHHH
Confidence 4566799999999999998887799999999999999999999998 799999999863210
Q ss_pred -----------------------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHh
Q psy15208 148 -----------------------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFL 174 (1027)
Q Consensus 148 -----------------------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~ 174 (1027)
.+..+.+|+|+++|++|.++|++.+..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~ 267 (342)
T 3hju_A 188 VLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYL 267 (342)
T ss_dssp HCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHH
T ss_pred hccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCcccChHHHHH
Confidence 034568999999999999999999887
Q ss_pred hhCCCC
Q psy15208 175 WANPLD 180 (1027)
Q Consensus 175 l~~~~~ 180 (1027)
+.+.+.
T Consensus 268 ~~~~~~ 273 (342)
T 3hju_A 268 LMELAK 273 (342)
T ss_dssp HHHHCC
T ss_pred HHHHcC
Confidence 777654
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-17 Score=175.50 Aligned_cols=163 Identities=18% Similarity=0.249 Sum_probs=125.6
Q ss_pred EEEEE-ecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 6 KFFNI-NGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 6 ~~i~I-~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
+.+.+ .+.+| ++++..+.+++ +.+|+|||+||++ ++.....+..+++.|+++||.|+++|+||||.|.+..
T Consensus 12 ~~~~~~~~~~g~~l~~~~~~~~~----~~~~~vv~~HG~~---~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 84 (270)
T 3llc_A 12 HAITVGQGSDARSIAALVRAPAQ----DERPTCIWLGGYR---SDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGAF 84 (270)
T ss_dssp EEEEESSGGGCEEEEEEEECCSS----TTSCEEEEECCTT---CCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSCG
T ss_pred ceEEEeeccCcceEEEEeccCCC----CCCCeEEEECCCc---cccccchHHHHHHHHHhCCCcEEEeccccCCCCCCcc
Confidence 34444 44566 67776666653 3478999999974 3433334556888888889999999999999998653
Q ss_pred --CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHh---cC---CcCCccEEEEEccCCCc---------
Q psy15208 84 --DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKR---LD---KEISIKILILISVAVKK--------- 146 (1027)
Q Consensus 84 --~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~---~p---~~~~V~gLVli~p~~~~--------- 146 (1027)
.+....++|+.++++++. ..+++|+||||||.+++.++.+ +| + +++++|+++|....
T Consensus 85 ~~~~~~~~~~d~~~~~~~l~----~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~--~v~~~il~~~~~~~~~~~~~~~~ 158 (270)
T 3llc_A 85 RDGTISRWLEEALAVLDHFK----PEKAILVGSSMGGWIALRLIQELKARHDNPT--QVSGMVLIAPAPDFTSDLIEPLL 158 (270)
T ss_dssp GGCCHHHHHHHHHHHHHHHC----CSEEEEEEETHHHHHHHHHHHHHHTCSCCSC--EEEEEEEESCCTTHHHHTTGGGC
T ss_pred ccccHHHHHHHHHHHHHHhc----cCCeEEEEeChHHHHHHHHHHHHHhcccccc--ccceeEEecCcccchhhhhhhhh
Confidence 244556788888877764 4489999999999999999999 98 6 79999999985320
Q ss_pred -------------------C----------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCC
Q psy15208 147 -------------------W----------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDI 181 (1027)
Q Consensus 147 -------------------~----------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~ 181 (1027)
+ .+..+++|++++||++|.++|++.+..+.+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~ 234 (270)
T 3llc_A 159 GDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPA 234 (270)
T ss_dssp CHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTSCS
T ss_pred hhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC
Confidence 0 1356789999999999999999999988877654
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.5e-17 Score=170.63 Aligned_cols=168 Identities=17% Similarity=0.208 Sum_probs=132.1
Q ss_pred CceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 3 SNTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 3 m~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
|++....+.+.+| ++++.+|.|.+ .+++|+|||+||+++..++... ++..+++.|++. |.|+++|+||+|.+.
T Consensus 1 m~~~~~~~~~~dg~~l~~~~~~p~~---~~~~~~vv~~HG~~~~~~~~~~-~~~~~~~~l~~~-~~v~~~d~~~~~~~~- 74 (275)
T 3h04_A 1 MTEIKYKVITKDAFALPYTIIKAKN---QPTKGVIVYIHGGGLMFGKAND-LSPQYIDILTEH-YDLIQLSYRLLPEVS- 74 (275)
T ss_dssp --CEEEEEECTTSCEEEEEEECCSS---SSCSEEEEEECCSTTTSCCTTC-SCHHHHHHHTTT-EEEEEECCCCTTTSC-
T ss_pred CcceEEEEecCCcEEEEEEEEccCC---CCCCCEEEEEECCcccCCchhh-hHHHHHHHHHhC-ceEEeeccccCCccc-
Confidence 3455677888888 79999998875 3468999999998755555443 234788888876 999999999998764
Q ss_pred CCCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc---------------
Q psy15208 82 TYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK--------------- 146 (1027)
Q Consensus 82 ~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~--------------- 146 (1027)
......|+..+++++....+..+++|+||||||.+++.++.+ + +++++|+++|....
T Consensus 75 ----~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~--~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 146 (275)
T 3h04_A 75 ----LDCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--R--DIDGVIDFYGYSRINTEPFKTTNSYYAKI 146 (275)
T ss_dssp ----HHHHHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--S--CCSEEEEESCCSCSCSHHHHSCCHHHHHH
T ss_pred ----cchhHHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--C--CccEEEeccccccccccccccccchhhcc
Confidence 234688999999999988877899999999999999999998 3 69999999876421
Q ss_pred ---C--------------------------------------C----------------CCCCCCcEEEEEeCCCCCCCh
Q psy15208 147 ---W--------------------------------------L----------------IPEVPKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 147 ---~--------------------------------------~----------------l~~i~~PvLiIhG~~D~iVP~ 169 (1027)
. . +..++ |++++||++|.++|+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~~~~ 225 (275)
T 3h04_A 147 AQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYDVPV 225 (275)
T ss_dssp HTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSSSCT
T ss_pred cccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEecCCCCCCCh
Confidence 0 0 14455 999999999999999
Q ss_pred HHHHhhhCCCCCceEe
Q psy15208 170 KDVFLWANPLDIPVVV 185 (1027)
Q Consensus 170 ~~~~~l~~~~~~~~L~ 185 (1027)
+.+..+.+.+....+.
T Consensus 226 ~~~~~~~~~~~~~~~~ 241 (275)
T 3h04_A 226 EESEHIMNHVPHSTFE 241 (275)
T ss_dssp HHHHHHHTTCSSEEEE
T ss_pred HHHHHHHHhcCCceEE
Confidence 9999988876544333
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-17 Score=184.18 Aligned_cols=164 Identities=17% Similarity=0.149 Sum_probs=123.2
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCC
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGV-GASSGT 82 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGh-G~S~g~ 82 (1027)
++...+.+.+| +++++.+.|... .....|+|||+||++. +. ..|..+++.|+++||+|+++|+||| |.|++.
T Consensus 7 ~~~~~i~~~dG~~l~~~~~~p~~~-~~~~~~~VvllHG~g~---~~--~~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~ 80 (305)
T 1tht_A 7 TIAHVLRVNNGQELHVWETPPKEN-VPFKNNTILIASGFAR---RM--DHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGS 80 (305)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTT-SCCCSCEEEEECTTCG---GG--GGGHHHHHHHHTTTCCEEEECCCBCC------
T ss_pred ceEEEEEcCCCCEEEEEEecCccc-CCCCCCEEEEecCCcc---Cc--hHHHHHHHHHHHCCCEEEEeeCCCCCCCCCCc
Confidence 45667888888 788888877531 0124688999999843 32 2588899999999999999999999 999764
Q ss_pred CC--CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc--------------
Q psy15208 83 YD--SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-------------- 146 (1027)
Q Consensus 83 ~~--~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-------------- 146 (1027)
.. +...++.|+.++++++. ..+..+++|+||||||.+|+.+|.+ | +++++|+.++....
T Consensus 81 ~~~~~~~~~~~D~~~~~~~l~-~~~~~~~~lvGhSmGG~iA~~~A~~-~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 155 (305)
T 1tht_A 81 IDEFTMTTGKNSLCTVYHWLQ-TKGTQNIGLIAASLSARVAYEVISD-L---ELSFLITAVGVVNLRDTLEKALGFDYLS 155 (305)
T ss_dssp --CCCHHHHHHHHHHHHHHHH-HTTCCCEEEEEETHHHHHHHHHTTT-S---CCSEEEEESCCSCHHHHHHHHHSSCGGG
T ss_pred ccceehHHHHHHHHHHHHHHH-hCCCCceEEEEECHHHHHHHHHhCc-c---CcCEEEEecCchhHHHHHHHHhhhhhhh
Confidence 32 33567899999999997 4466789999999999999999988 5 48999998753210
Q ss_pred ---------------------C-----------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 147 ---------------------W-----------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 147 ---------------------~-----------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
+ .+..+++|+|++||++|.++|++.+..+++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i 226 (305)
T 1tht_A 156 LPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHI 226 (305)
T ss_dssp SCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTC
T ss_pred cchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhc
Confidence 0 13467899999999999999999999888765
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=9e-18 Score=181.01 Aligned_cols=161 Identities=19% Similarity=0.232 Sum_probs=121.7
Q ss_pred EecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCc
Q psy15208 10 INGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSG 86 (1027)
Q Consensus 10 I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~ 86 (1027)
+.+.+| ++++..+.+.+ .|+|||+||++. +. ..|..+++.|++ +|+|+++|+||||.|+... .+.
T Consensus 9 ~~~~~g~~l~y~~~G~~~------~p~lvl~hG~~~---~~--~~w~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~ 76 (266)
T 3om8_A 9 LATSDGASLAYRLDGAAE------KPLLALSNSIGT---TL--HMWDAQLPALTR-HFRVLRYDARGHGASSVPPGPYTL 76 (266)
T ss_dssp EECTTSCEEEEEEESCTT------SCEEEEECCTTC---CG--GGGGGGHHHHHT-TCEEEEECCTTSTTSCCCCSCCCH
T ss_pred EeccCCcEEEEEecCCCC------CCEEEEeCCCcc---CH--HHHHHHHHHhhc-CcEEEEEcCCCCCCCCCCCCCCCH
Confidence 455566 78777765532 578999999743 32 247788899986 8999999999999998543 244
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC------------------c--
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK------------------K-- 146 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~------------------~-- 146 (1027)
..+++|+.++++.+ ...+++|+||||||.+|+.+|.++|+ +++++|++++... .
T Consensus 77 ~~~a~dl~~~l~~l----~~~~~~lvGhS~Gg~va~~~A~~~P~--rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (266)
T 3om8_A 77 ARLGEDVLELLDAL----EVRRAHFLGLSLGGIVGQWLALHAPQ--RIERLVLANTSAWLGPAAQWDERIAAVLQAEDMS 150 (266)
T ss_dssp HHHHHHHHHHHHHT----TCSCEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCSBCCCSHHHHHHHHHHHHCSSSH
T ss_pred HHHHHHHHHHHHHh----CCCceEEEEEChHHHHHHHHHHhChH--hhheeeEecCcccCCchhHHHHHHHHHHccccHH
Confidence 56677777777765 34489999999999999999999999 8999999975311 0
Q ss_pred ---------C------------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhh
Q psy15208 147 ---------W------------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLW 175 (1027)
Q Consensus 147 ---------~------------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l 175 (1027)
| .+..+++|+|++||++|.++|++.+..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~l 230 (266)
T 3om8_A 151 ETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELI 230 (266)
T ss_dssp HHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHHHHHHH
T ss_pred HHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHHHHHHH
Confidence 0 1346789999999999999999999888
Q ss_pred hCCCCCceEeecc
Q psy15208 176 ANPLDIPVVVIPE 188 (1027)
Q Consensus 176 ~~~~~~~~L~t~E 188 (1027)
.+.+....+...+
T Consensus 231 ~~~ip~a~~~~i~ 243 (266)
T 3om8_A 231 AASIAGARLVTLP 243 (266)
T ss_dssp HHHSTTCEEEEES
T ss_pred HHhCCCCEEEEeC
Confidence 7766544433333
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-17 Score=179.17 Aligned_cols=167 Identities=17% Similarity=0.205 Sum_probs=118.6
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
+++.+++. .|| +|++++|.|++ ..+.|+||++||++. +.....+..+++.|+++||.|+++|+||||.|.+.
T Consensus 30 ~e~~~~~~-~dG~~i~g~l~~P~~---~~~~p~Vl~~HG~g~---~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~ 102 (259)
T 4ao6_A 30 QERGFSLE-VDGRTVPGVYWSPAE---GSSDRLVLLGHGGTT---HKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASV 102 (259)
T ss_dssp EEEEEEEE-ETTEEEEEEEEEESS---SCCSEEEEEEC-----------CHHHHHHHHHHHTTEEEEEECCCC-------
T ss_pred eEEEEEEe-eCCeEEEEEEEeCCC---CCCCCEEEEeCCCcc---cccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCc
Confidence 34445555 456 89999999987 356799999999743 32223577899999999999999999999998753
Q ss_pred CCC---------------------ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEc
Q psy15208 83 YDS---------------------GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILIS 141 (1027)
Q Consensus 83 ~~~---------------------~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~ 141 (1027)
... ....+.|..+.++++....+..++.++|+||||.+++.++...|. +++.|+..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr---i~Aav~~~ 179 (259)
T 4ao6_A 103 QAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR---IKVALLGL 179 (259)
T ss_dssp ------CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTT---EEEEEEES
T ss_pred ccccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCc---eEEEEEec
Confidence 210 011345667777887776666789999999999999999999875 77777665
Q ss_pred cCCCcC-------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 142 VAVKKW-------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 142 p~~~~~-------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
+..... ...++++|+|++||++|+++|++.+..+++.+.
T Consensus 180 ~~~~~~~~~~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~ 225 (259)
T 4ao6_A 180 MGVEGVNGEDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLG 225 (259)
T ss_dssp CCTTSTTHHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCC
T ss_pred cccccccccchhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhC
Confidence 543322 266789999999999999999999998877654
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.8e-18 Score=173.57 Aligned_cols=166 Identities=11% Similarity=0.047 Sum_probs=132.6
Q ss_pred CceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 3 SNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 3 m~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
|..+.+.++..+.++.++++.|++ ++|+||++||++ ++.....+..+++.|+++||.|+++|+||+|.|...
T Consensus 10 ~~~~~~~~~~~g~~l~~~~~~p~~-----~~p~vv~~hG~~---~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~ 81 (223)
T 2o2g_A 10 PQEYAVSVSVGEVKLKGNLVIPNG-----ATGIVLFAHGSG---SSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEID 81 (223)
T ss_dssp CCEEEEEEEETTEEEEEEEECCTT-----CCEEEEEECCTT---CCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHH
T ss_pred ceeeEEEEecCCeEEEEEEecCCC-----CceEEEEecCCC---CCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCcc
Confidence 566778888755589999998875 578999999974 344333466889999999999999999999987632
Q ss_pred C------CCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc--CCCCCC
Q psy15208 83 Y------DSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK--WLIPEV 152 (1027)
Q Consensus 83 ~------~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~--~~l~~i 152 (1027)
. .+......|+.++++++.... +..+++++||||||.+++.++.++|+ +++++|++++.... ..+..+
T Consensus 82 ~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~v~~~v~~~~~~~~~~~~~~~~ 159 (223)
T 2o2g_A 82 LRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPE--TVQAVVSRGGRPDLAPSALPHV 159 (223)
T ss_dssp HHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTT--TEEEEEEESCCGGGCTTTGGGC
T ss_pred chhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCC--ceEEEEEeCCCCCcCHHHHhcC
Confidence 1 345567899999999998763 33479999999999999999999998 79999999987543 246678
Q ss_pred CCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 153 PKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 153 ~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
++|+++++|++|.++|......+.+.
T Consensus 160 ~~P~l~i~g~~D~~~~~~~~~~~~~~ 185 (223)
T 2o2g_A 160 KAPTLLIVGGYDLPVIAMNEDALEQL 185 (223)
T ss_dssp CSCEEEEEETTCHHHHHHHHHHHHHC
T ss_pred CCCEEEEEccccCCCCHHHHHHHHhh
Confidence 89999999999999986665555443
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.1e-17 Score=172.85 Aligned_cols=120 Identities=20% Similarity=0.186 Sum_probs=92.6
Q ss_pred EEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---
Q psy15208 8 FNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD--- 84 (1027)
Q Consensus 8 i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~--- 84 (1027)
..+...+.++++..+.+++ .|+|||+||++ ++.. .|..+++.|+++||.|+++|+||||.|.....
T Consensus 7 ~~~~~~g~~l~~~~~g~~~------~~~vv~~hG~~---~~~~--~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~ 75 (286)
T 3qit_A 7 KFLEFGGNQICLCSWGSPE------HPVVLCIHGIL---EQGL--AWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTS 75 (286)
T ss_dssp EEEEETTEEEEEEEESCTT------SCEEEEECCTT---CCGG--GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSGGG
T ss_pred heeecCCceEEEeecCCCC------CCEEEEECCCC---cccc--hHHHHHHHhhhcCeEEEEECCCCCCCCCCCCCCCC
Confidence 4566666688888886643 57899999974 3332 47889999999999999999999999986531
Q ss_pred -CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 85 -SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 85 -~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
+....+.|+..+++ ..+..+++|+||||||.+++.++.++|+ +++++|++++..
T Consensus 76 ~~~~~~~~~~~~~~~----~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~ 130 (286)
T 3qit_A 76 YSSLTFLAQIDRVIQ----ELPDQPLLLVGHSMGAMLATAIASVRPK--KIKELILVELPL 130 (286)
T ss_dssp CSHHHHHHHHHHHHH----HSCSSCEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCC
T ss_pred cCHHHHHHHHHHHHH----hcCCCCEEEEEeCHHHHHHHHHHHhChh--hccEEEEecCCC
Confidence 22334444444444 3455689999999999999999999998 799999999753
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.75 E-value=2.6e-17 Score=175.62 Aligned_cols=115 Identities=23% Similarity=0.266 Sum_probs=87.1
Q ss_pred EecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCc
Q psy15208 10 INGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSG 86 (1027)
Q Consensus 10 I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~ 86 (1027)
+.+.+| ++++..+. . .++|||+||++. +. ..|..+++.|+++||+|+++|+||||.|+... .+.
T Consensus 3 ~~~~~g~~l~y~~~G-~-------g~~vvllHG~~~---~~--~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~ 69 (271)
T 3ia2_A 3 FVAKDGTQIYFKDWG-S-------GKPVLFSHGWLL---DA--DMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDY 69 (271)
T ss_dssp EECTTSCEEEEEEES-S-------SSEEEEECCTTC---CG--GGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSH
T ss_pred EEcCCCCEEEEEccC-C-------CCeEEEECCCCC---cH--HHHHHHHHHHHhCCceEEEecCCCCccCCCCCCCCCH
Confidence 556677 67766553 2 245899999843 32 25788899999899999999999999998643 244
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhc-CCcCCccEEEEEccC
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRL-DKEISIKILILISVA 143 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~-p~~~~V~gLVli~p~ 143 (1027)
..+++|+.++++.+. ..+++|+||||||.+++.++.++ |+ +++++|++++.
T Consensus 70 ~~~a~d~~~~l~~l~----~~~~~lvGhS~GG~~~~~~~a~~~p~--~v~~lvl~~~~ 121 (271)
T 3ia2_A 70 DTFADDIAQLIEHLD----LKEVTLVGFSMGGGDVARYIARHGSA--RVAGLVLLGAV 121 (271)
T ss_dssp HHHHHHHHHHHHHHT----CCSEEEEEETTHHHHHHHHHHHHCST--TEEEEEEESCC
T ss_pred HHHHHHHHHHHHHhC----CCCceEEEEcccHHHHHHHHHHhCCc--ccceEEEEccC
Confidence 567788888777664 34899999999999777666665 77 79999999853
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.4e-17 Score=165.15 Aligned_cols=165 Identities=14% Similarity=0.109 Sum_probs=124.2
Q ss_pred CCCceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHH--HHHHHHhCCcEEEEEcCCCCCC
Q psy15208 1 MISNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQT--LVRVMLSLGYISIRMNFRGVGA 78 (1027)
Q Consensus 1 M~m~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~--la~~La~~Gy~Vla~DlrGhG~ 78 (1027)
|.+++ ..+...+.++++.+|.|.+ ++|+|||+||++. +.. .|.. +++.|+++||.|+++|+||+|.
T Consensus 2 m~~~~--~~~~~~g~~l~~~~~~~~~-----~~~~vv~~hG~~~---~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~ 69 (207)
T 3bdi_A 2 MALQE--EFIDVNGTRVFQRKMVTDS-----NRRSIALFHGYSF---TSM--DWDKADLFNNYSKIGYNVYAPDYPGFGR 69 (207)
T ss_dssp CCCEE--EEEEETTEEEEEEEECCTT-----CCEEEEEECCTTC---CGG--GGGGGTHHHHHHTTTEEEEEECCTTSTT
T ss_pred Cccee--EEEeeCCcEEEEEEEeccC-----CCCeEEEECCCCC---Ccc--ccchHHHHHHHHhCCCeEEEEcCCcccc
Confidence 34444 3455555589999898875 4689999999743 322 4667 8999999999999999999999
Q ss_pred C---CCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc---CCCCCC
Q psy15208 79 S---SGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK---WLIPEV 152 (1027)
Q Consensus 79 S---~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~---~~l~~i 152 (1027)
| ........ ...+..+.+..+....+..+++++||||||.+++.++.++|+ +++++++++|.... ..+..+
T Consensus 70 s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~~~~~v~~~~~~~~~~~~~~~~~ 146 (207)
T 3bdi_A 70 SASSEKYGIDRG-DLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPD--IVDGIIAVAPAWVESLKGDMKKI 146 (207)
T ss_dssp SCCCTTTCCTTC-CHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCSCGGGHHHHTTC
T ss_pred cCcccCCCCCcc-hHHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCch--hheEEEEeCCccccchhHHHhhc
Confidence 9 54322110 234444444444444555689999999999999999999988 79999999987432 135678
Q ss_pred CCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 153 PKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 153 ~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
++|+++++|++|.++|++....+.+.+.
T Consensus 147 ~~p~l~i~g~~D~~~~~~~~~~~~~~~~ 174 (207)
T 3bdi_A 147 RQKTLLVWGSKDHVVPIALSKEYASIIS 174 (207)
T ss_dssp CSCEEEEEETTCTTTTHHHHHHHHHHST
T ss_pred cCCEEEEEECCCCccchHHHHHHHHhcC
Confidence 8999999999999999999887776554
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.74 E-value=4.2e-17 Score=172.88 Aligned_cols=166 Identities=16% Similarity=0.174 Sum_probs=117.2
Q ss_pred CceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 3 SNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 3 m~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
|++..+.+ .+.++++..+.+ + .|+|||+||++ ++. ...|..+++.|+++||+|+++|+||||.|...
T Consensus 2 ~~~~~~~~--~g~~l~~~~~g~-~------~~~vvllHG~~---~~~-~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~ 68 (254)
T 2ocg_A 2 VTSAKVAV--NGVQLHYQQTGE-G------DHAVLLLPGML---GSG-ETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPP 68 (254)
T ss_dssp CEEEEEEE--TTEEEEEEEEEC-C------SEEEEEECCTT---CCH-HHHCHHHHHHSCTTTEEEEEECCTTSTTCCSS
T ss_pred CceeEEEE--CCEEEEEEEecC-C------CCeEEEECCCC---CCC-ccchHHHHHHHhhCCCeEEEECCCCCCCCCCC
Confidence 34444433 333676655432 2 35789999973 221 12467889999988999999999999999753
Q ss_pred CCCc--cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC---------------
Q psy15208 83 YDSG--NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK--------------- 145 (1027)
Q Consensus 83 ~~~~--~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~--------------- 145 (1027)
...+ .....++..+++++... +..+++|+||||||.+|+.+|.++|+ +++++|++++...
T Consensus 69 ~~~~~~~~~~~~~~~~~~~l~~l-~~~~~~l~GhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 145 (254)
T 2ocg_A 69 DRDFPADFFERDAKDAVDLMKAL-KFKKVSLLGWSDGGITALIAAAKYPS--YIHKMVIWGANAYVTDEDSMIYEGIRDV 145 (254)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHHT-TCSSEEEEEETHHHHHHHHHHHHCTT--TEEEEEEESCCSBCCHHHHHHHHTTSCG
T ss_pred CCCCChHHHHHHHHHHHHHHHHh-CCCCEEEEEECHhHHHHHHHHHHChH--HhhheeEeccccccChhhHHHHHHHHHH
Confidence 2211 11445555566555443 45589999999999999999999999 7999999987421
Q ss_pred -cC------------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 146 -KW------------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 146 -~~------------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
.| .+.++++|+|++||++|.++|++.+..+.+.++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~ 225 (254)
T 2ocg_A 146 SKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGS 225 (254)
T ss_dssp GGSCHHHHHHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTC
T ss_pred HHHHHHhHHHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCCCC
Confidence 00 13467899999999999999999888776655433
Q ss_pred eE
Q psy15208 183 VV 184 (1027)
Q Consensus 183 ~L 184 (1027)
.+
T Consensus 226 ~~ 227 (254)
T 2ocg_A 226 RL 227 (254)
T ss_dssp EE
T ss_pred EE
Confidence 33
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.4e-17 Score=183.05 Aligned_cols=140 Identities=16% Similarity=0.054 Sum_probs=102.2
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCcc--ccCCccEEEEECCCCCCCCCCChH-HHHHHHHHHHhCCcEEEEEcCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIK--LLKLKGVVLIAHPHPLFGGTMDNK-VVQTLVRVMLSLGYISIRMNFRGVGAS 79 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~--~~~~~pvVVllHG~~~~gGs~~~~-~~~~la~~La~~Gy~Vla~DlrGhG~S 79 (1027)
..+.+.+.+.+| ++.+..+.|.... ..+.+|+|||+||++.....+... .+..++..|+++||+|+++|+||||.|
T Consensus 26 ~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~S 105 (377)
T 1k8q_A 26 PAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWA 105 (377)
T ss_dssp CCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTS
T ss_pred CceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCCCCC
Confidence 345678888999 5677666554310 012578999999985433222110 123466689999999999999999999
Q ss_pred CCC-----------CCCccchHH-HHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCc-CCccEEEEEccC
Q psy15208 80 SGT-----------YDSGNGETD-DMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKE-ISIKILILISVA 143 (1027)
Q Consensus 80 ~g~-----------~~~~~~~~~-Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~-~~V~gLVli~p~ 143 (1027)
.+. ..+....+. |+.++++++....+..+++|+||||||.+++.+|.++|+. .+++++|+++|.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~ 182 (377)
T 1k8q_A 106 RRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPV 182 (377)
T ss_dssp CEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCC
T ss_pred CCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCc
Confidence 752 123445677 9999999887776777899999999999999999998851 148999999874
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.6e-17 Score=170.28 Aligned_cols=162 Identities=20% Similarity=0.261 Sum_probs=122.6
Q ss_pred CCCceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q psy15208 1 MISNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS 80 (1027)
Q Consensus 1 M~m~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~ 80 (1027)
|+++.+.+.+. .+..+.+.|.+ ++|+|||+||++ ++. ..|..+++.|+++||.|+++|+||||.|.
T Consensus 1 m~~~~~~~~~~----g~~~~~~~~~~-----~~~~vv~~hG~~---~~~--~~~~~~~~~l~~~G~~v~~~d~~g~g~s~ 66 (238)
T 1ufo_A 1 MRVRTERLTLA----GLSVLARIPEA-----PKALLLALHGLQ---GSK--EHILALLPGYAERGFLLLAFDAPRHGERE 66 (238)
T ss_dssp CCEEEEEEEET----TEEEEEEEESS-----CCEEEEEECCTT---CCH--HHHHHTSTTTGGGTEEEEECCCTTSTTSS
T ss_pred CCceecccccC----CEEEEEEecCC-----CccEEEEECCCc---ccc--hHHHHHHHHHHhCCCEEEEecCCCCccCC
Confidence 55555544332 24555666764 578999999973 332 35778889999999999999999999997
Q ss_pred CCCCC-------------ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC
Q psy15208 81 GTYDS-------------GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW 147 (1027)
Q Consensus 81 g~~~~-------------~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~ 147 (1027)
..... ......|+.++++++..... .+++++||||||.+++.++.++|+ .++++++.++.....
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~--~~~~~~~~~~~~~~~ 143 (238)
T 1ufo_A 67 GPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFG-LPLFLAGGSLGAFVAHLLLAEGFR--PRGVLAFIGSGFPMK 143 (238)
T ss_dssp CCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEEEETHHHHHHHHHHHTTCC--CSCEEEESCCSSCCC
T ss_pred CCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhccC-CcEEEEEEChHHHHHHHHHHhccC--cceEEEEecCCccch
Confidence 64322 23567888899999876644 689999999999999999999997 688888887653211
Q ss_pred ----------------------CCCCC-CCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 148 ----------------------LIPEV-PKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 148 ----------------------~l~~i-~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
.+..+ ++|++++||++|.++|++.+..+.+.+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 198 (238)
T 1ufo_A 144 LPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEAL 198 (238)
T ss_dssp CCTTCCCCCHHHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHH
T ss_pred hhhhhccCCcccchhhcCChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHH
Confidence 23455 799999999999999999887666544
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=7e-17 Score=173.44 Aligned_cols=171 Identities=14% Similarity=0.152 Sum_probs=130.4
Q ss_pred CceEEEEEecCCceEEEEEEecCCc---cccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCC
Q psy15208 3 SNTKFFNINGSVGILHCAINFPSSI---KLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGAS 79 (1027)
Q Consensus 3 m~~~~i~I~t~dG~I~~~l~~P~~~---~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S 79 (1027)
|+.+.+.+...+..+.+.+|.|++. ....+.|+||++||.++..++.. .|..+++.|+++||.|+++|+||||.+
T Consensus 2 m~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~--~~~~~~~~l~~~G~~v~~~d~~g~g~~ 79 (277)
T 3bxp_A 2 MQVEQRTLNTAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGR--EEAPIATRMMAAGMHTVVLNYQLIVGD 79 (277)
T ss_dssp EEEEEEEECSTTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCT--THHHHHHHHHHTTCEEEEEECCCSTTT
T ss_pred cceEEEEeccCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCc--cchHHHHHHHHCCCEEEEEecccCCCC
Confidence 4566677866666888989988721 01356899999999765555544 477899999999999999999999955
Q ss_pred CCCCCCccchHHHHHHHHHHHHHh-----CCCCcEEEEEechhHHHHHHHHHhcCC------------cCCccEEEEEcc
Q psy15208 80 SGTYDSGNGETDDMEILLRYIQKK-----YPYLPIILAGFSFGTFVQAKLQKRLDK------------EISIKILILISV 142 (1027)
Q Consensus 80 ~g~~~~~~~~~~Dv~avl~~L~~~-----~~~~pviLVGhSmGG~vAl~~A~~~p~------------~~~V~gLVli~p 142 (1027)
+. .......|+..+++++... .+..+++|+||||||.+++.++.++++ ..+++++|+++|
T Consensus 80 ~~---~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p 156 (277)
T 3bxp_A 80 QS---VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYP 156 (277)
T ss_dssp CC---CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESC
T ss_pred Cc---cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCC
Confidence 44 3345788888888888764 223479999999999999999998632 126999999998
Q ss_pred CCC-------------c-----------CCCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 143 AVK-------------K-----------WLIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 143 ~~~-------------~-----------~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
... . ..+....+|+|++||++|.++|++.+..+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~ 216 (277)
T 3bxp_A 157 VIDLTAGFPTTSAARNQITTDARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQA 216 (277)
T ss_dssp CCBTTSSSSSSHHHHHHHCSCGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHH
T ss_pred cccCCCCCCCccccchhccchhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHH
Confidence 752 0 12445678999999999999999888766553
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.74 E-value=1e-16 Score=172.32 Aligned_cols=127 Identities=15% Similarity=0.152 Sum_probs=93.3
Q ss_pred ceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
..+.+.+...++.+....+.+... .+..|+|||+||++ ++.. .|..+++.|+++||.|+++|+||||.|....
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~vv~~hG~~---~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 91 (315)
T 4f0j_A 19 PVHYLDFTSQGQPLSMAYLDVAPK--KANGRTILLMHGKN---FCAG--TWERTIDVLADAGYRVIAVDQVGFCKSSKPA 91 (315)
T ss_dssp CCEEEEEEETTEEEEEEEEEECCS--SCCSCEEEEECCTT---CCGG--GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS
T ss_pred cceeEEEecCCCCeeEEEeecCCC--CCCCCeEEEEcCCC---Ccch--HHHHHHHHHHHCCCeEEEeecCCCCCCCCCC
Confidence 445567776666555444333221 24678999999974 3332 4788999999999999999999999998643
Q ss_pred C---CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 84 D---SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 84 ~---~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
. +....+.|+..+++ ..+..+++|+||||||.+++.++.++|+ +++++|+++|.
T Consensus 92 ~~~~~~~~~~~~~~~~~~----~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~ 148 (315)
T 4f0j_A 92 HYQYSFQQLAANTHALLE----RLGVARASVIGHSMGGMLATRYALLYPR--QVERLVLVNPI 148 (315)
T ss_dssp SCCCCHHHHHHHHHHHHH----HTTCSCEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCS
T ss_pred ccccCHHHHHHHHHHHHH----HhCCCceEEEEecHHHHHHHHHHHhCcH--hhheeEEecCc
Confidence 2 22334444444444 4455689999999999999999999998 79999999985
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.2e-17 Score=176.41 Aligned_cols=142 Identities=16% Similarity=0.126 Sum_probs=109.9
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---CCccchHHHHHHHHHHHHHhCCCCc
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---DSGNGETDDMEILLRYIQKKYPYLP 108 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---~~~~~~~~Dv~avl~~L~~~~~~~p 108 (1027)
..|+|||+||++. +. ..|..+.+.|++ +|+|+++|+||||.|+... .+...+++|+.++++.+ +..+
T Consensus 14 ~~~~vvllHG~~~---~~--~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l----~~~~ 83 (268)
T 3v48_A 14 DAPVVVLISGLGG---SG--SYWLPQLAVLEQ-EYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAA----GIEH 83 (268)
T ss_dssp TCCEEEEECCTTC---CG--GGGHHHHHHHHT-TSEEEECCCTTBTTBCCCCCTTCCHHHHHHHHHHHHHHT----TCCS
T ss_pred CCCEEEEeCCCCc---cH--HHHHHHHHHHhh-cCeEEEECCCCCCCCCCCccccCCHHHHHHHHHHHHHHc----CCCC
Confidence 4688999999843 33 257888999976 7999999999999997542 13445666666666544 4458
Q ss_pred EEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-----------------------------------C------
Q psy15208 109 IILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-----------------------------------W------ 147 (1027)
Q Consensus 109 viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-----------------------------------~------ 147 (1027)
++|+||||||.+++.+|.++|+ +++++|++++.... |
T Consensus 84 ~~lvGhS~GG~ia~~~A~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (268)
T 3v48_A 84 YAVVGHALGALVGMQLALDYPA--SVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAP 161 (268)
T ss_dssp EEEEEETHHHHHHHHHHHHCTT--TEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTTHH
T ss_pred eEEEEecHHHHHHHHHHHhChh--hceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhhcccc
Confidence 9999999999999999999999 79999998763110 0
Q ss_pred ---------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceEe
Q psy15208 148 ---------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVVV 185 (1027)
Q Consensus 148 ---------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L~ 185 (1027)
.+..+++|+|++||++|.++|++.+..+.+.++...+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~p~~~~~ 232 (268)
T 3v48_A 162 RLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKM 232 (268)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEE
T ss_pred cchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhCCcCeEE
Confidence 14567899999999999999999998887766554443
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=7.4e-17 Score=175.63 Aligned_cols=111 Identities=14% Similarity=0.040 Sum_probs=85.8
Q ss_pred ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHH-HHHHHHhCCcEEEEEcCCCCCCCCC--C-C--CCccc
Q psy15208 15 GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQT-LVRVMLSLGYISIRMNFRGVGASSG--T-Y--DSGNG 88 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~-la~~La~~Gy~Vla~DlrGhG~S~g--~-~--~~~~~ 88 (1027)
.++++..+.+++ .|+|||+||++. +.. .|.. +++.|+++||+|+++|+||||.|+. . . .+...
T Consensus 11 ~~l~y~~~G~~~------~~~vvllHG~~~---~~~--~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~~~~~~~~ 79 (298)
T 1q0r_A 11 VELWSDDFGDPA------DPALLLVMGGNL---SAL--GWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGE 79 (298)
T ss_dssp EEEEEEEESCTT------SCEEEEECCTTC---CGG--GSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHH
T ss_pred eEEEEEeccCCC------CCeEEEEcCCCC---Ccc--chHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCcCCcCHHH
Confidence 377777665433 467899999853 222 3544 6689999899999999999999986 1 1 23456
Q ss_pred hHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 89 ETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+++|+.++++.+ +..+++|+||||||.+++.+|.++|+ +++++|++++
T Consensus 80 ~a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~ 127 (298)
T 1q0r_A 80 LAADAVAVLDGW----GVDRAHVVGLSMGATITQVIALDHHD--RLSSLTMLLG 127 (298)
T ss_dssp HHHHHHHHHHHT----TCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESC
T ss_pred HHHHHHHHHHHh----CCCceEEEEeCcHHHHHHHHHHhCch--hhheeEEecc
Confidence 777777777765 34489999999999999999999999 7999999875
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=7e-17 Score=168.63 Aligned_cols=166 Identities=12% Similarity=0.104 Sum_probs=130.2
Q ss_pred CceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 3 SNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 3 m~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
+..+.+.+++.++++.++++.|++. .++.|+||++||++ ++. ..+..+++.|+++||.|+++|+||+|.+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~p~vv~~HG~~---g~~--~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~ 76 (241)
T 3f67_A 4 IIAGETSIPSQGENMPAYHARPKNA--DGPLPIVIVVQEIF---GVH--EHIRDLCRRLAQEGYLAIAPELYFRQGDPNE 76 (241)
T ss_dssp EEEEEEEEEETTEEEEEEEEEETTC--CSCEEEEEEECCTT---CSC--HHHHHHHHHHHHTTCEEEEECTTTTTCCGGG
T ss_pred ceeeeEEEecCCcceEEEEecCCCC--CCCCCEEEEEcCcC---ccC--HHHHHHHHHHHHCCcEEEEecccccCCCCCc
Confidence 4567788888666899999999762 24679999999963 333 3578899999999999999999999887754
Q ss_pred CCCc-------------cchHHHHHHHHHHHHHhCC-CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-
Q psy15208 83 YDSG-------------NGETDDMEILLRYIQKKYP-YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW- 147 (1027)
Q Consensus 83 ~~~~-------------~~~~~Dv~avl~~L~~~~~-~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~- 147 (1027)
+... .....|+.++++++..... ..+++++||||||.+++.++.++|+ +.+++++.+.....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~---~~~~v~~~~~~~~~~ 153 (241)
T 3f67_A 77 YHDIPTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQ---LKAAVAWYGKLVGEK 153 (241)
T ss_dssp CCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTT---CCEEEEESCCCSCCC
T ss_pred hhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcC---cceEEEEeccccCCC
Confidence 4322 2458899999999987641 3479999999999999999999886 67777766543211
Q ss_pred ----------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 148 ----------LIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 148 ----------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
.+..+++|++++||++|.++|++....+.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~ 194 (241)
T 3f67_A 154 SLNSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQA 194 (241)
T ss_dssp CSSSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHH
T ss_pred ccCCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHH
Confidence 2456789999999999999999987766554
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.73 E-value=4.1e-17 Score=174.46 Aligned_cols=116 Identities=22% Similarity=0.192 Sum_probs=91.0
Q ss_pred EecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCc
Q psy15208 10 INGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSG 86 (1027)
Q Consensus 10 I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~ 86 (1027)
+.+.+| ++++..+.|++ .|+|||+||++. +. ..|..+++.|+++||+|+++|+||||.|.... .+.
T Consensus 3 ~~~~~g~~l~y~~~g~~~------~~~vvllHG~~~---~~--~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~ 71 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGPRD------GLPVVFHHGWPL---SA--DDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDM 71 (275)
T ss_dssp EECTTSCEEEEEEESCTT------SCEEEEECCTTC---CG--GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSH
T ss_pred EEccCCCEEEEEEcCCCC------CceEEEECCCCC---ch--hhHHHHHHHHHHCCceEEEEcCCcCCCCCCCCCCCCH
Confidence 556667 77777776543 367899999743 32 24788999999999999999999999998542 244
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhc-CCcCCccEEEEEcc
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRL-DKEISIKILILISV 142 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~-p~~~~V~gLVli~p 142 (1027)
..+++|+.++++.+. ..+++|+||||||.+++.++.++ |+ +++++|++++
T Consensus 72 ~~~~~dl~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~~~p~--~v~~lvl~~~ 122 (275)
T 1a88_A 72 DTYAADVAALTEALD----LRGAVHIGHSTGGGEVARYVARAEPG--RVAKAVLVSA 122 (275)
T ss_dssp HHHHHHHHHHHHHHT----CCSEEEEEETHHHHHHHHHHHHSCTT--SEEEEEEESC
T ss_pred HHHHHHHHHHHHHcC----CCceEEEEeccchHHHHHHHHHhCch--heEEEEEecC
Confidence 567788888877764 34799999999999999988886 87 7999999985
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.73 E-value=3.2e-17 Score=175.95 Aligned_cols=116 Identities=19% Similarity=0.237 Sum_probs=91.4
Q ss_pred EecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCc
Q psy15208 10 INGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSG 86 (1027)
Q Consensus 10 I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~ 86 (1027)
+.+.+| ++++..+.|++ .|+|||+||++. +. ..|..+++.|+++||+|+++|+||||.|+... .+.
T Consensus 4 ~~~~~g~~l~y~~~g~~~------~~~vvllHG~~~---~~--~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~ 72 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGPRD------APVIHFHHGWPL---SA--DDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWDGHDM 72 (276)
T ss_dssp EECTTSCEEEEEEESCTT------SCEEEEECCTTC---CG--GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSH
T ss_pred EECCCCcEEEEEecCCCC------CCeEEEECCCCc---ch--hHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCH
Confidence 556666 78777776533 367899999743 32 24788999999999999999999999998532 244
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhc-CCcCCccEEEEEcc
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRL-DKEISIKILILISV 142 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~-p~~~~V~gLVli~p 142 (1027)
..+++|+.++++.+. ..+++|+||||||.+++.++.++ |+ +++++|++++
T Consensus 73 ~~~~~d~~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~~~p~--~v~~lvl~~~ 123 (276)
T 1zoi_A 73 DHYADDVAAVVAHLG----IQGAVHVGHSTGGGEVVRYMARHPED--KVAKAVLIAA 123 (276)
T ss_dssp HHHHHHHHHHHHHHT----CTTCEEEEETHHHHHHHHHHHHCTTS--CCCCEEEESC
T ss_pred HHHHHHHHHHHHHhC----CCceEEEEECccHHHHHHHHHHhCHH--heeeeEEecC
Confidence 567888888888764 33799999999999999988887 87 7999999985
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.5e-17 Score=174.85 Aligned_cols=156 Identities=17% Similarity=0.172 Sum_probs=117.9
Q ss_pred ecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCccc
Q psy15208 11 NGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGNG 88 (1027)
Q Consensus 11 ~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~~ 88 (1027)
...+.++++..+.+.+ .+.|+|||+||++. +. ..|..+++.|++ +|+|+++|+||||.|.... .+...
T Consensus 8 ~~~g~~l~y~~~g~~~----~~~~~vvllHG~~~---~~--~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~~~~~~ 77 (266)
T 2xua_A 8 AVNGTELHYRIDGERH----GNAPWIVLSNSLGT---DL--SMWAPQVAALSK-HFRVLRYDTRGHGHSEAPKGPYTIEQ 77 (266)
T ss_dssp ECSSSEEEEEEESCSS----SCCCEEEEECCTTC---CG--GGGGGGHHHHHT-TSEEEEECCTTSTTSCCCSSCCCHHH
T ss_pred EECCEEEEEEEcCCcc----CCCCeEEEecCccC---CH--HHHHHHHHHHhc-CeEEEEecCCCCCCCCCCCCCCCHHH
Confidence 3334478887775532 13578999999743 32 247788899976 6999999999999998532 24556
Q ss_pred hHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc----------------------
Q psy15208 89 ETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK---------------------- 146 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~---------------------- 146 (1027)
+++|+.++++.+. ..+++|+||||||.+|+.+|.++|+ +++++|++++....
T Consensus 78 ~~~dl~~~l~~l~----~~~~~lvGhS~Gg~va~~~A~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (266)
T 2xua_A 78 LTGDVLGLMDTLK----IARANFCGLSMGGLTGVALAARHAD--RIERVALCNTAARIGSPEVWVPRAVKARTEGMHALA 151 (266)
T ss_dssp HHHHHHHHHHHTT----CCSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHhcC----CCceEEEEECHHHHHHHHHHHhChh--hhheeEEecCCCCCCchHHHHHHHHHHHhcChHHHH
Confidence 7778777777653 3489999999999999999999998 79999999864210
Q ss_pred ------C------------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 147 ------W------------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 147 ------~------------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
| .+..+++|+++++|++|.++|++.+..+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~ 231 (266)
T 2xua_A 152 DAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQA 231 (266)
T ss_dssp HHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred HHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHh
Confidence 0 0345789999999999999999988877765
Q ss_pred CCCc
Q psy15208 179 LDIP 182 (1027)
Q Consensus 179 ~~~~ 182 (1027)
+...
T Consensus 232 ~~~~ 235 (266)
T 2xua_A 232 IAGA 235 (266)
T ss_dssp STTC
T ss_pred CCCC
Confidence 5433
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.1e-17 Score=178.14 Aligned_cols=165 Identities=19% Similarity=0.247 Sum_probs=133.2
Q ss_pred CCCceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q psy15208 1 MISNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS 80 (1027)
Q Consensus 1 M~m~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~ 80 (1027)
|.+..+.+.+...+.++.++++.|. +.|+|||+||++. +.. .|..+++.|+++||.|+++|+||||.|.
T Consensus 2 m~~~~~~~~~~~~g~~l~~~~~~p~------~~p~vv~~HG~~~---~~~--~~~~~~~~l~~~g~~v~~~d~~G~g~s~ 70 (290)
T 3ksr_A 2 MEAKLSSIEIPVGQDELSGTLLTPT------GMPGVLFVHGWGG---SQH--HSLVRAREAVGLGCICMTFDLRGHEGYA 70 (290)
T ss_dssp CEEEEEEEEEEETTEEEEEEEEEEE------SEEEEEEECCTTC---CTT--TTHHHHHHHHTTTCEEECCCCTTSGGGG
T ss_pred CCCceeeEEecCCCeEEEEEEecCC------CCcEEEEeCCCCC---CcC--cHHHHHHHHHHCCCEEEEeecCCCCCCC
Confidence 6777888889887679999999885 3789999999753 332 4778999999999999999999999997
Q ss_pred CCCC--CccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC---cC------
Q psy15208 81 GTYD--SGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK---KW------ 147 (1027)
Q Consensus 81 g~~~--~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~---~~------ 147 (1027)
+... +....++|+.++++++.... +..+++|+||||||.+++.++.++| ++++++++|... .|
T Consensus 71 ~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~----~~~~~l~~p~~~~~~~~~~~~~~ 146 (290)
T 3ksr_A 71 SMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP----VEWLALRSPALYKDAHWDQPKVS 146 (290)
T ss_dssp GGTTTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC----CSEEEEESCCCCCSSCTTSBHHH
T ss_pred CCcccccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC----CCEEEEeCcchhhhhhhhccccc
Confidence 6432 34567899999999998763 2347999999999999999999876 688999887643 11
Q ss_pred ------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 148 ------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 148 ------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
.+..+.+|++++||++|.++|++....+.+.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~ 203 (290)
T 3ksr_A 147 LNADPDLMDYRRRALAPGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFT 203 (290)
T ss_dssp HHHSTTHHHHTTSCCCGGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTT
T ss_pred ccCChhhhhhhhhhhhhccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhc
Confidence 023567899999999999999999887766543
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-17 Score=172.64 Aligned_cols=160 Identities=17% Similarity=0.201 Sum_probs=127.9
Q ss_pred EEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-
Q psy15208 7 FFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD- 84 (1027)
Q Consensus 7 ~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~- 84 (1027)
.+.+.+.+| ++.++++.|++ +++|+||++||++ ++. ..|..+++.|+++||.|+++|+||||.|.....
T Consensus 5 ~~~~~~~~g~~l~~~~~~p~~----~~~p~vv~~hG~~---~~~--~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~ 75 (236)
T 1zi8_A 5 GISIQSYDGHTFGALVGSPAK----APAPVIVIAQDIF---GVN--AFMRETVSWLVDQGYAAVCPDLYARQAPGTALDP 75 (236)
T ss_dssp TCCEECTTSCEECEEEECCSS----CSEEEEEEECCTT---BSC--HHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCT
T ss_pred eEEEecCCCCeEEEEEECCCC----CCCCEEEEEcCCC---CCC--HHHHHHHHHHHhCCcEEEeccccccCCCcccccc
Confidence 356788888 69999998875 4689999999963 332 357889999999999999999999998864211
Q ss_pred ----------------CccchHHHHHHHHHHHHHhCC-CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-
Q psy15208 85 ----------------SGNGETDDMEILLRYIQKKYP-YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK- 146 (1027)
Q Consensus 85 ----------------~~~~~~~Dv~avl~~L~~~~~-~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~- 146 (1027)
+......|+.++++++..+.+ ..+++++||||||.+++.++.++| +++++++.|....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~----~~~~v~~~~~~~~~ 151 (236)
T 1zi8_A 76 QDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY----VDRAVGYYGVGLEK 151 (236)
T ss_dssp TCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC----SSEEEEESCSSGGG
T ss_pred cchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC----ccEEEEecCccccc
Confidence 223457899999999987654 358999999999999999999986 7899998876432
Q ss_pred --CCCCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 147 --WLIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 147 --~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
..+..+++|+++++|++|.++|++.+..+.+.+
T Consensus 152 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 186 (236)
T 1zi8_A 152 QLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGF 186 (236)
T ss_dssp CGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHH
T ss_pred chhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHH
Confidence 235677899999999999999999887666543
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2.2e-17 Score=179.34 Aligned_cols=167 Identities=17% Similarity=0.146 Sum_probs=116.5
Q ss_pred CCCceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q psy15208 1 MISNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS 80 (1027)
Q Consensus 1 M~m~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~ 80 (1027)
|.+.+....+...+.++++..+. . .|+|||+||++...++ ...|..+++.| +.+|+|+++|+||||.|+
T Consensus 1 ~~~~~~~~~~~~~g~~l~y~~~G-~-------g~~vvllHG~~~~~~~--~~~w~~~~~~L-~~~~~vi~~Dl~G~G~S~ 69 (282)
T 1iup_A 1 MANLEIGKSILAAGVLTNYHDVG-E-------GQPVILIHGSGPGVSA--YANWRLTIPAL-SKFYRVIAPDMVGFGFTD 69 (282)
T ss_dssp --CTTCCEEEEETTEEEEEEEEC-C-------SSEEEEECCCCTTCCH--HHHHTTTHHHH-TTTSEEEEECCTTSTTSC
T ss_pred CCCccccceEEECCEEEEEEecC-C-------CCeEEEECCCCCCccH--HHHHHHHHHhh-ccCCEEEEECCCCCCCCC
Confidence 33333333455444477665542 1 3568999997432211 12466677778 458999999999999998
Q ss_pred CCC---CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-----------
Q psy15208 81 GTY---DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK----------- 146 (1027)
Q Consensus 81 g~~---~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~----------- 146 (1027)
... .+...+++|+.++++.+ +..+++|+||||||.+|+.+|.++|+ +++++|++++....
T Consensus 70 ~~~~~~~~~~~~a~dl~~~l~~l----~~~~~~lvGhS~GG~ia~~~A~~~P~--~v~~lvl~~~~~~~~~~~~~~~~~~ 143 (282)
T 1iup_A 70 RPENYNYSKDSWVDHIIGIMDAL----EIEKAHIVGNAFGGGLAIATALRYSE--RVDRMVLMGAAGTRFDVTEGLNAVW 143 (282)
T ss_dssp CCTTCCCCHHHHHHHHHHHHHHT----TCCSEEEEEETHHHHHHHHHHHHSGG--GEEEEEEESCCCSCCCCCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHh----CCCceEEEEECHhHHHHHHHHHHChH--HHHHHHeeCCccCCCCCCHHHHHHh
Confidence 642 13455667776666654 44589999999999999999999999 89999999864210
Q ss_pred ----------------------C-----------------------------------------CCCCCCCcEEEEEeCC
Q psy15208 147 ----------------------W-----------------------------------------LIPEVPKNTIIIHGEL 163 (1027)
Q Consensus 147 ----------------------~-----------------------------------------~l~~i~~PvLiIhG~~ 163 (1027)
. .+..+++|+|++||++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 223 (282)
T 1iup_A 144 GYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGRE 223 (282)
T ss_dssp TCCSCHHHHHHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETT
T ss_pred cCCCcHHHHHHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCC
Confidence 0 0135678999999999
Q ss_pred CCCCChHHHHhhhCCCCCceE
Q psy15208 164 DEIIPLKDVFLWANPLDIPVV 184 (1027)
Q Consensus 164 D~iVP~~~~~~l~~~~~~~~L 184 (1027)
|.++|++.+..+.+.+....+
T Consensus 224 D~~~p~~~~~~~~~~~~~~~~ 244 (282)
T 1iup_A 224 DQVVPLSSSLRLGELIDRAQL 244 (282)
T ss_dssp CSSSCHHHHHHHHHHCTTEEE
T ss_pred CCCCCHHHHHHHHHhCCCCeE
Confidence 999999988877766544433
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.3e-16 Score=170.59 Aligned_cols=114 Identities=21% Similarity=0.221 Sum_probs=87.7
Q ss_pred EecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCc
Q psy15208 10 INGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSG 86 (1027)
Q Consensus 10 I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~ 86 (1027)
+.+.+| ++++..+. + .|+|||+||++. +. ..|..+++.|+++||+|+++|+||||.|.... .+.
T Consensus 3 ~~~~~g~~l~y~~~g--~------g~~vvllHG~~~---~~--~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~ 69 (274)
T 1a8q_A 3 CTTRDGVEIFYKDWG--Q------GRPVVFIHGWPL---NG--DAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDF 69 (274)
T ss_dssp EECTTSCEEEEEEEC--S------SSEEEEECCTTC---CG--GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSH
T ss_pred EEccCCCEEEEEecC--C------CceEEEECCCcc---hH--HHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCcH
Confidence 456666 67665543 1 356899999843 32 24788899999999999999999999998542 234
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhc-CCcCCccEEEEEcc
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRL-DKEISIKILILISV 142 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~-p~~~~V~gLVli~p 142 (1027)
..+++|+.++++.+. ..+++|+||||||.+++.++.++ |+ +++++|++++
T Consensus 70 ~~~~~dl~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~~~p~--~v~~lvl~~~ 120 (274)
T 1a8q_A 70 DTFADDLNDLLTDLD----LRDVTLVAHSMGGGELARYVGRHGTG--RLRSAVLLSA 120 (274)
T ss_dssp HHHHHHHHHHHHHTT----CCSEEEEEETTHHHHHHHHHHHHCST--TEEEEEEESC
T ss_pred HHHHHHHHHHHHHcC----CCceEEEEeCccHHHHHHHHHHhhhH--heeeeeEecC
Confidence 566778777777653 34799999999999999988776 77 7999999985
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.72 E-value=9.1e-17 Score=171.62 Aligned_cols=114 Identities=23% Similarity=0.236 Sum_probs=87.7
Q ss_pred EecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCc
Q psy15208 10 INGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSG 86 (1027)
Q Consensus 10 I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~ 86 (1027)
+.+.+| ++++..+. . .|+|||+||++. +. ..|..+++.|+++||+|+++|+||||.|.... .+.
T Consensus 3 ~~~~~g~~l~y~~~g-~-------~~~vvllHG~~~---~~--~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~ 69 (273)
T 1a8s_A 3 FTTRDGTQIYYKDWG-S-------GQPIVFSHGWPL---NA--DSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDM 69 (273)
T ss_dssp EECTTSCEEEEEEES-C-------SSEEEEECCTTC---CG--GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSH
T ss_pred EecCCCcEEEEEEcC-C-------CCEEEEECCCCC---cH--HHHhhHHhhHhhCCcEEEEECCCCCCCCCCCCCCCCH
Confidence 556677 67665543 1 357899999843 32 24788999999999999999999999998542 234
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhc-CCcCCccEEEEEcc
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRL-DKEISIKILILISV 142 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~-p~~~~V~gLVli~p 142 (1027)
..+++|+.++++.+ +..+++|+||||||.+++.++.++ |+ +++++|++++
T Consensus 70 ~~~~~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~~p~--~v~~lvl~~~ 120 (273)
T 1a8s_A 70 DTYADDLAQLIEHL----DLRDAVLFGFSTGGGEVARYIGRHGTA--RVAKAGLISA 120 (273)
T ss_dssp HHHHHHHHHHHHHT----TCCSEEEEEETHHHHHHHHHHHHHCST--TEEEEEEESC
T ss_pred HHHHHHHHHHHHHh----CCCCeEEEEeChHHHHHHHHHHhcCch--heeEEEEEcc
Confidence 56677877777765 344899999999999999988776 77 7999999985
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.72 E-value=2.7e-17 Score=173.67 Aligned_cols=152 Identities=14% Similarity=0.207 Sum_probs=114.8
Q ss_pred EEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--
Q psy15208 6 KFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY-- 83 (1027)
Q Consensus 6 ~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~-- 83 (1027)
+...+.+++|+++++.+.+ ..|+|||+||++ ++.. .|..+++.|.++||+|+++|+||||.|....
T Consensus 4 ~~~~~~~~~~~~~~~~~~~-------~~~~vv~lHG~~---~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 71 (279)
T 4g9e_A 4 NYHELETSHGRIAVRESEG-------EGAPLLMIHGNS---SSGA--IFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDP 71 (279)
T ss_dssp EEEEEEETTEEEEEEECCC-------CEEEEEEECCTT---CCGG--GGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCH
T ss_pred EEEEEEcCCceEEEEecCC-------CCCeEEEECCCC---Cchh--HHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCc
Confidence 3456778888877665543 257899999974 3332 4778888866779999999999999998642
Q ss_pred ---CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-------------
Q psy15208 84 ---DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------------- 147 (1027)
Q Consensus 84 ---~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------------- 147 (1027)
.+....+.|+.++++.+ +..+++|+||||||.+++.+|.++|+ +.++|+++++....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~---~~~~vl~~~~~~~~~~~~~~~~~~~~~ 144 (279)
T 4g9e_A 72 DRSYSMEGYADAMTEVMQQL----GIADAVVFGWSLGGHIGIEMIARYPE---MRGLMITGTPPVAREEVGQGFKSGPDM 144 (279)
T ss_dssp HHHSSHHHHHHHHHHHHHHH----TCCCCEEEEETHHHHHHHHHTTTCTT---CCEEEEESCCCCCGGGHHHHBCCSTTG
T ss_pred ccCCCHHHHHHHHHHHHHHh----CCCceEEEEECchHHHHHHHHhhCCc---ceeEEEecCCCCCCCccchhhccchhh
Confidence 13345566666666654 33489999999999999999999987 78888887643210
Q ss_pred ----------------------------------------------------------CCCCCCCcEEEEEeCCCCCCCh
Q psy15208 148 ----------------------------------------------------------LIPEVPKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 148 ----------------------------------------------------------~l~~i~~PvLiIhG~~D~iVP~ 169 (1027)
.+..+.+|+++++|++|.++|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 224 (279)
T 4g9e_A 145 ALAGQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVEL 224 (279)
T ss_dssp GGGGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBCH
T ss_pred hhcCcccccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCcccch
Confidence 0234689999999999999999
Q ss_pred HHHHhhh
Q psy15208 170 KDVFLWA 176 (1027)
Q Consensus 170 ~~~~~l~ 176 (1027)
+....+.
T Consensus 225 ~~~~~~~ 231 (279)
T 4g9e_A 225 DFVSKVK 231 (279)
T ss_dssp HHHTTCC
T ss_pred HHHHHHh
Confidence 9988876
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=9.3e-17 Score=172.37 Aligned_cols=165 Identities=13% Similarity=0.072 Sum_probs=124.6
Q ss_pred EEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCcc
Q psy15208 9 NINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGN 87 (1027)
Q Consensus 9 ~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~ 87 (1027)
.+.+.+| .+.+++..|......++.|+||++||+++..++. ..+..+++.|+++||.|+++|+||+|.|.+. ....
T Consensus 18 ~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~-~~~~ 94 (276)
T 3hxk_A 18 TFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQ--RESDPLALAFLAQGYQVLLLNYTVMNKGTNY-NFLS 94 (276)
T ss_dssp ECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCG--GGSHHHHHHHHHTTCEEEEEECCCTTSCCCS-CTHH
T ss_pred cccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCc--hhhHHHHHHHHHCCCEEEEecCccCCCcCCC-CcCc
Confidence 3444555 5666554443211125679999999976554543 3477899999999999999999999998754 3455
Q ss_pred chHHHHHHHHHHHHHhC-----CCCcEEEEEechhHHHHHHHHHh-cCCcCCccEEEEEccCCCc---------------
Q psy15208 88 GETDDMEILLRYIQKKY-----PYLPIILAGFSFGTFVQAKLQKR-LDKEISIKILILISVAVKK--------------- 146 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~~-----~~~pviLVGhSmGG~vAl~~A~~-~p~~~~V~gLVli~p~~~~--------------- 146 (1027)
....|+..+++++.... +..+++|+||||||.+++.++.+ .+. +++++|+++|....
T Consensus 95 ~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~--~~~~~v~~~p~~~~~~~~~~~~~~~~~~~ 172 (276)
T 3hxk_A 95 QNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIH--RPKGVILCYPVTSFTFGWPSDLSHFNFEI 172 (276)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTT--CCSEEEEEEECCBTTSSCSSSSSSSCCCC
T ss_pred hHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCC--CccEEEEecCcccHHhhCCcchhhhhcCc
Confidence 67899999999998863 34589999999999999999988 666 79999999986541
Q ss_pred ---------CCCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 147 ---------WLIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 147 ---------~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
..+..+.+|++++||++|.++|++.+..+.+.
T Consensus 173 ~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~ 213 (276)
T 3hxk_A 173 ENISEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDR 213 (276)
T ss_dssp SCCGGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHH
T ss_pred hhhhhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHH
Confidence 12456779999999999999999888766543
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.71 E-value=3.2e-17 Score=167.88 Aligned_cols=158 Identities=13% Similarity=0.115 Sum_probs=122.8
Q ss_pred EEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHH--HHHHHHhCCcEEEEEcCCCCCCCCCCC--C
Q psy15208 9 NINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQT--LVRVMLSLGYISIRMNFRGVGASSGTY--D 84 (1027)
Q Consensus 9 ~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~--la~~La~~Gy~Vla~DlrGhG~S~g~~--~ 84 (1027)
.+...+.+++++.+.|++ .+.+|+|||+||++ ++. ..|.. +++.|+++||.|+++|+||||.|.... .
T Consensus 11 ~~~~~g~~l~~~~~~p~~---~~~~~~vv~~hG~~---~~~--~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~ 82 (210)
T 1imj_A 11 TIQVQGQALFFREALPGS---GQARFSVLLLHGIR---FSS--ETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPA 82 (210)
T ss_dssp CEEETTEEECEEEEECSS---SCCSCEEEECCCTT---CCH--HHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSS
T ss_pred eEeeCCeEEEEEEeCCCC---CCCCceEEEECCCC---Ccc--ceeecchhHHHHHHCCCeEEEecCCCCCCCCCCCCcc
Confidence 455555589999998865 24688999999974 232 34666 589999999999999999999988643 2
Q ss_pred CccchH--HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC----CCCCCCCcEEE
Q psy15208 85 SGNGET--DDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW----LIPEVPKNTII 158 (1027)
Q Consensus 85 ~~~~~~--~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~----~l~~i~~PvLi 158 (1027)
+..... .++..+++.+. ..+++++|||+||.+++.++.++|+ +++++|+++|..... .+..+++|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~----~~~~~l~G~S~Gg~~a~~~a~~~~~--~v~~~v~~~~~~~~~~~~~~~~~~~~p~l~ 156 (210)
T 1imj_A 83 PIGELAPGSFLAAVVDALE----LGPPVVISPSLSGMYSLPFLTAPGS--QLPGFVPVAPICTDKINAANYASVKTPALI 156 (210)
T ss_dssp CTTSCCCTHHHHHHHHHHT----CCSCEEEEEGGGHHHHHHHHTSTTC--CCSEEEEESCSCGGGSCHHHHHTCCSCEEE
T ss_pred hhhhcchHHHHHHHHHHhC----CCCeEEEEECchHHHHHHHHHhCcc--ccceEEEeCCCccccccchhhhhCCCCEEE
Confidence 233344 77777776653 3479999999999999999999988 799999999876432 25577899999
Q ss_pred EEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 159 IHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 159 IhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
++|++|. +|++....+ +.....
T Consensus 157 i~g~~D~-~~~~~~~~~-~~~~~~ 178 (210)
T 1imj_A 157 VYGDQDP-MGQTSFEHL-KQLPNH 178 (210)
T ss_dssp EEETTCH-HHHHHHHHH-TTSSSE
T ss_pred EEcCccc-CCHHHHHHH-hhCCCC
Confidence 9999999 999998888 655433
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.71 E-value=4.2e-17 Score=169.49 Aligned_cols=141 Identities=16% Similarity=0.129 Sum_probs=115.7
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---C-CccchHHHHHHHHHHHHHhCCCC
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---D-SGNGETDDMEILLRYIQKKYPYL 107 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---~-~~~~~~~Dv~avl~~L~~~~~~~ 107 (1027)
..|+|||+||++ ++.. .|..+++.|+++||.|+++|+||||.|.... . +...+..|+.++++++... ..
T Consensus 21 ~~~~vv~~HG~~---~~~~--~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~--~~ 93 (251)
T 3dkr_A 21 TDTGVVLLHAYT---GSPN--DMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAK--YA 93 (251)
T ss_dssp SSEEEEEECCTT---CCGG--GGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTT--CS
T ss_pred CCceEEEeCCCC---CCHH--HHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHh--cC
Confidence 467889999974 3333 4788999999999999999999999996421 1 4556788999999999876 55
Q ss_pred cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-----------------------------------------
Q psy15208 108 PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK----------------------------------------- 146 (1027)
Q Consensus 108 pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~----------------------------------------- 146 (1027)
+++|+||||||.+++.++.++|+ .++++++.+|....
T Consensus 94 ~~~l~G~S~Gg~~a~~~a~~~p~--~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (251)
T 3dkr_A 94 KVFVFGLSLGGIFAMKALETLPG--ITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQILAYLPGQLAAIDQ 171 (251)
T ss_dssp EEEEEESHHHHHHHHHHHHHCSS--CCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEechHHHHHHHHHHhCcc--ceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCcchhhHHhhhHHHHHHHHH
Confidence 89999999999999999999998 78999998887541
Q ss_pred ------CCCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCC
Q psy15208 147 ------WLIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDI 181 (1027)
Q Consensus 147 ------~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~ 181 (1027)
..+..+++|+++++|++|.++|++.+..+.+.+..
T Consensus 172 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 212 (251)
T 3dkr_A 172 FATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALIN 212 (251)
T ss_dssp HHHHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTT
T ss_pred HHHHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcC
Confidence 02566789999999999999999998877765544
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=9.6e-17 Score=173.24 Aligned_cols=99 Identities=24% Similarity=0.338 Sum_probs=77.3
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
++|||+||++. +. ..|..+++.|+++||+|+++|+||||.|.... .+...+++|+.++++.+ +..+++|
T Consensus 28 ~~vvllHG~~~---~~--~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l----~~~~~~l 98 (281)
T 3fob_A 28 KPVVLIHGWPL---SG--RSWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGYEYDTFTSDLHQLLEQL----ELQNVTL 98 (281)
T ss_dssp EEEEEECCTTC---CG--GGGTTTHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHT----TCCSEEE
T ss_pred CeEEEECCCCC---cH--HHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCccccCHHHHHHHHHHHHHHc----CCCcEEE
Confidence 56899999853 22 24677888998899999999999999998643 23456677777777665 3458999
Q ss_pred EEechhHHHHHHHHHhc-CCcCCccEEEEEccC
Q psy15208 112 AGFSFGTFVQAKLQKRL-DKEISIKILILISVA 143 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~-p~~~~V~gLVli~p~ 143 (1027)
+||||||.+++.++..+ |+ +++++|++++.
T Consensus 99 vGhS~GG~i~~~~~a~~~p~--~v~~lvl~~~~ 129 (281)
T 3fob_A 99 VGFSMGGGEVARYISTYGTD--RIEKVVFAGAV 129 (281)
T ss_dssp EEETTHHHHHHHHHHHHCST--TEEEEEEESCC
T ss_pred EEECccHHHHHHHHHHcccc--ceeEEEEecCC
Confidence 99999999888777765 67 79999999853
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.71 E-value=1e-16 Score=159.97 Aligned_cols=148 Identities=23% Similarity=0.340 Sum_probs=117.3
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
..+|+|||+||++ ++.....+..+++.|+++||.|+++|+||+|.|.+.. ......+++..+++++....+..+++
T Consensus 2 ~~~~~vv~~HG~~---~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (176)
T 2qjw_A 2 MSRGHCILAHGFE---SGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLG-QLGDVRGRLQRLLEIARAATEKGPVV 77 (176)
T ss_dssp CSSCEEEEECCTT---CCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGC-TTCCHHHHHHHHHHHHHHHHTTSCEE
T ss_pred CCCcEEEEEeCCC---CCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHhcCCCCCEE
Confidence 3578999999974 3333334558999999999999999999999987542 33456677778888887766556899
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC---CCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceEee
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL---IPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVVVI 186 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~---l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L~t 186 (1027)
++||||||.+++.++.++| ++++|+++|+..... ...+++|++++||++|.++|++....+.+..+......
T Consensus 78 l~G~S~Gg~~a~~~a~~~~----~~~~v~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 152 (176)
T 2qjw_A 78 LAGSSLGSYIAAQVSLQVP----TRALFLMVPPTKMGPLPALDAAAVPISIVHAWHDELIPAADVIAWAQARSARLLLV 152 (176)
T ss_dssp EEEETHHHHHHHHHHTTSC----CSEEEEESCCSCBTTBCCCCCCSSCEEEEEETTCSSSCHHHHHHHHHHHTCEEEEE
T ss_pred EEEECHHHHHHHHHHHhcC----hhheEEECCcCCccccCcccccCCCEEEEEcCCCCccCHHHHHHHHHhCCceEEEe
Confidence 9999999999999999876 899999998765322 56788999999999999999999887776554444333
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.71 E-value=7.2e-17 Score=171.78 Aligned_cols=138 Identities=20% Similarity=0.277 Sum_probs=107.3
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
.|+|||+||++ ++. ..|..+++.|+++||+|+++|+||||.|+... .+...+.+|+..+++++... +..+++
T Consensus 16 ~~~vvllHG~~---~~~--~~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~~ 89 (247)
T 1tqh_A 16 ERAVLLLHGFT---GNS--ADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNK-GYEKIA 89 (247)
T ss_dssp SCEEEEECCTT---CCT--HHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHH-TCCCEE
T ss_pred CcEEEEECCCC---CCh--HHHHHHHHHHHHCCCEEEecccCCCCCCHHHhcCCCHHHHHHHHHHHHHHHHHc-CCCeEE
Confidence 36789999974 333 35888999999889999999999999875321 24455677888888887765 345899
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-------------------------------------------
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------------------------------------------- 147 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------------------------------------------- 147 (1027)
|+||||||.+++.+|.++| ++++|+++++....
T Consensus 90 lvG~SmGG~ia~~~a~~~p----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (247)
T 1tqh_A 90 VAGLSLGGVFSLKLGYTVP----IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLK 165 (247)
T ss_dssp EEEETHHHHHHHHHHTTSC----CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSCCTTHH
T ss_pred EEEeCHHHHHHHHHHHhCC----CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccchHHHHhhhhcccCCCHHHHH
Confidence 9999999999999999886 68888775432100
Q ss_pred -----------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 148 -----------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 148 -----------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
.+..+++|+|++||++|.++|++.+..+++.++
T Consensus 166 ~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~ 209 (247)
T 1tqh_A 166 ALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIE 209 (247)
T ss_dssp HHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCC
T ss_pred HHHHHHHHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcC
Confidence 134678999999999999999999887776654
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.5e-16 Score=173.16 Aligned_cols=117 Identities=17% Similarity=0.145 Sum_probs=88.9
Q ss_pred EEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC-CC----
Q psy15208 9 NINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG-TY---- 83 (1027)
Q Consensus 9 ~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g-~~---- 83 (1027)
.+...+.++++..+.|++ .|+|||+||++. +.. ..|..+++.|+ .+|+|+++|+||||.|+. ..
T Consensus 7 ~~~~~g~~l~~~~~G~~~------~~~vvllHG~~~---~~~-~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~~~~~ 75 (286)
T 2yys_A 7 YVPVGEAELYVEDVGPVE------GPALFVLHGGPG---GNA-YVLREGLQDYL-EGFRVVYFDQRGSGRSLELPQDPRL 75 (286)
T ss_dssp EEECSSCEEEEEEESCTT------SCEEEEECCTTT---CCS-HHHHHHHGGGC-TTSEEEEECCTTSTTSCCCCSCGGG
T ss_pred EEeECCEEEEEEeecCCC------CCEEEEECCCCC---cch-hHHHHHHHHhc-CCCEEEEECCCCCCCCCCCccCccc
Confidence 444444488887776533 467999999843 332 03788888885 589999999999999986 32
Q ss_pred CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 84 DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 84 ~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
.+...+++|+.++++.+ +..+++|+||||||.+|+.+|.++|+ ++++|++++.
T Consensus 76 ~~~~~~a~dl~~ll~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~---v~~lvl~~~~ 128 (286)
T 2yys_A 76 FTVDALVEDTLLLAEAL----GVERFGLLAHGFGAVVALEVLRRFPQ---AEGAILLAPW 128 (286)
T ss_dssp CCHHHHHHHHHHHHHHT----TCCSEEEEEETTHHHHHHHHHHHCTT---EEEEEEESCC
T ss_pred CcHHHHHHHHHHHHHHh----CCCcEEEEEeCHHHHHHHHHHHhCcc---hheEEEeCCc
Confidence 24456777777777665 34589999999999999999999986 8999998863
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-16 Score=170.60 Aligned_cols=167 Identities=16% Similarity=0.115 Sum_probs=130.2
Q ss_pred EEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC
Q psy15208 7 FFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDS 85 (1027)
Q Consensus 7 ~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~ 85 (1027)
...+...++ .+...+|.|.+ +++|+|||+||+++..++.. .|..+++.|+++||.|+++|+||++.. +
T Consensus 40 ~~~i~~~~~~~~~~~~~~p~~----~~~p~vv~~HGgg~~~~~~~--~~~~~~~~l~~~G~~v~~~d~~~~~~~-----~ 108 (262)
T 2pbl_A 40 RLNLSYGEGDRHKFDLFLPEG----TPVGLFVFVHGGYWMAFDKS--SWSHLAVGALSKGWAVAMPSYELCPEV-----R 108 (262)
T ss_dssp EEEEESSSSTTCEEEEECCSS----SCSEEEEEECCSTTTSCCGG--GCGGGGHHHHHTTEEEEEECCCCTTTS-----C
T ss_pred ccccccCCCCCceEEEEccCC----CCCCEEEEEcCcccccCChH--HHHHHHHHHHhCCCEEEEeCCCCCCCC-----C
Confidence 345665444 67777888865 46899999999765444433 467788999999999999999998753 3
Q ss_pred ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhc------CCcCCccEEEEEccCCCc-------------
Q psy15208 86 GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRL------DKEISIKILILISVAVKK------------- 146 (1027)
Q Consensus 86 ~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~------p~~~~V~gLVli~p~~~~------------- 146 (1027)
......|+.++++++....+ .+++|+||||||.+++.++.++ |+ +++++|+++|....
T Consensus 109 ~~~~~~d~~~~~~~l~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~--~v~~~vl~~~~~~~~~~~~~~~~~~~~ 185 (262)
T 2pbl_A 109 ISEITQQISQAVTAAAKEID-GPIVLAGHSAGGHLVARMLDPEVLPEAVGA--RIRNVVPISPLSDLRPLLRTSMNEKFK 185 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHSC-SCEEEEEETHHHHHHHHTTCTTTSCHHHHT--TEEEEEEESCCCCCGGGGGSTTHHHHC
T ss_pred hHHHHHHHHHHHHHHHHhcc-CCEEEEEECHHHHHHHHHhccccccccccc--cceEEEEecCccCchHHHhhhhhhhhC
Confidence 45679999999999998765 6899999999999999999887 66 79999999986431
Q ss_pred ------------CCCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceEeec
Q psy15208 147 ------------WLIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVVVIP 187 (1027)
Q Consensus 147 ------------~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L~t~ 187 (1027)
.....+.+|++++||++|.++|++.+..+.+.+.......+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~ 238 (262)
T 2pbl_A 186 MDADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWDADHVIAF 238 (262)
T ss_dssp CCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHTCEEEEET
T ss_pred CCHHHHHhcCcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhCCeEEEeC
Confidence 02456789999999999999999998887776553333333
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.4e-16 Score=165.77 Aligned_cols=157 Identities=11% Similarity=0.077 Sum_probs=118.2
Q ss_pred EecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCC-CCcc
Q psy15208 10 INGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASSGTY-DSGN 87 (1027)
Q Consensus 10 I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~~-~~~~ 87 (1027)
++..+.++++..+. ..|+|||+||++ ++ ...|..+++.|++ +||+|+++|+||||.|.... .+..
T Consensus 6 ~~~~g~~l~y~~~g--------~~~~vv~lhG~~---~~--~~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~~~~~ 72 (272)
T 3fsg_A 6 EYLTRSNISYFSIG--------SGTPIIFLHGLS---LD--KQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISPSTSD 72 (272)
T ss_dssp CEECTTCCEEEEEC--------CSSEEEEECCTT---CC--HHHHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSSCSHH
T ss_pred EEecCCeEEEEEcC--------CCCeEEEEeCCC---Cc--HHHHHHHHHHHhccCceEEEEecCCCCCCCCCCCCCCHH
Confidence 33444467665432 246789999974 22 2357788888877 79999999999999998754 2445
Q ss_pred chHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-----------------C---
Q psy15208 88 GETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-----------------W--- 147 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-----------------~--- 147 (1027)
.++.|+.++++.+ .+..+++|+||||||.+++.+|.++|+ +++++|+++|.... +
T Consensus 73 ~~~~~~~~~l~~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (272)
T 3fsg_A 73 NVLETLIEAIEEI---IGARRFILYGHSYGGYLAQAIAFHLKD--QTLGVFLTCPVITADHSKRLTGKHINILEEDINPV 147 (272)
T ss_dssp HHHHHHHHHHHHH---HTTCCEEEEEEEHHHHHHHHHHHHSGG--GEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCC
T ss_pred HHHHHHHHHHHHH---hCCCcEEEEEeCchHHHHHHHHHhChH--hhheeEEECcccccCccccccccchhhhhhhhhcc
Confidence 5666666666553 244589999999999999999999998 79999999986310 0
Q ss_pred -------------------------------------------------------CCCCCCCcEEEEEeCCCCCCChHHH
Q psy15208 148 -------------------------------------------------------LIPEVPKNTIIIHGELDEIIPLKDV 172 (1027)
Q Consensus 148 -------------------------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~ 172 (1027)
.+..+++|+++++|++|.++|++..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 227 (272)
T 3fsg_A 148 ENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQ 227 (272)
T ss_dssp TTGGGHHHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHH
T ss_pred cCHHHHHHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHH
Confidence 1267789999999999999999999
Q ss_pred HhhhCCCCCceE
Q psy15208 173 FLWANPLDIPVV 184 (1027)
Q Consensus 173 ~~l~~~~~~~~L 184 (1027)
..+.+.+....+
T Consensus 228 ~~~~~~~~~~~~ 239 (272)
T 3fsg_A 228 LKLINHNENGEI 239 (272)
T ss_dssp HHHHTTCTTEEE
T ss_pred HHHHHhcCCCeE
Confidence 988887654433
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-16 Score=167.27 Aligned_cols=156 Identities=17% Similarity=0.118 Sum_probs=116.4
Q ss_pred EEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---
Q psy15208 8 FNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD--- 84 (1027)
Q Consensus 8 i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~--- 84 (1027)
..+...++++++.... ..|+|||+||++..... |..+++.|++ ||+|+++|+||||.|.....
T Consensus 6 ~~~~~~~~~~~y~~~g--------~~~~vv~~HG~~~~~~~-----~~~~~~~L~~-~~~vi~~d~~G~G~s~~~~~~~~ 71 (278)
T 3oos_A 6 NIIKTPRGKFEYFLKG--------EGPPLCVTHLYSEYNDN-----GNTFANPFTD-HYSVYLVNLKGCGNSDSAKNDSE 71 (278)
T ss_dssp EEEEETTEEEEEEEEC--------SSSEEEECCSSEECCTT-----CCTTTGGGGG-TSEEEEECCTTSTTSCCCSSGGG
T ss_pred CcEecCCceEEEEecC--------CCCeEEEEcCCCcchHH-----HHHHHHHhhc-CceEEEEcCCCCCCCCCCCCccc
Confidence 3566666777765432 24679999998643332 4567788877 99999999999999986532
Q ss_pred -CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-----------------
Q psy15208 85 -SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK----------------- 146 (1027)
Q Consensus 85 -~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~----------------- 146 (1027)
+....++|+..+++. .+..+++|+||||||.+++.+|.++|+ +++++|+++|....
T Consensus 72 ~~~~~~~~~~~~~~~~----l~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 145 (278)
T 3oos_A 72 YSMTETIKDLEAIREA----LYINKWGFAGHSAGGMLALVYATEAQE--SLTKIIVGGAAASKEYASHKDSIYCSKNVKF 145 (278)
T ss_dssp GSHHHHHHHHHHHHHH----TTCSCEEEEEETHHHHHHHHHHHHHGG--GEEEEEEESCCSBGGGGGSTTSTTSTTSTTH
T ss_pred CcHHHHHHHHHHHHHH----hCCCeEEEEeecccHHHHHHHHHhCch--hhCeEEEecCccccccccccchhhhhhchhH
Confidence 233445555555544 355589999999999999999999998 79999999987550
Q ss_pred -------------------------------------------------------------C--------CCCCCCCcEE
Q psy15208 147 -------------------------------------------------------------W--------LIPEVPKNTI 157 (1027)
Q Consensus 147 -------------------------------------------------------------~--------~l~~i~~PvL 157 (1027)
. .+..+++|++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 225 (278)
T 3oos_A 146 NRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSF 225 (278)
T ss_dssp HHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEE
T ss_pred HHHHHHHHhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEE
Confidence 0 1346789999
Q ss_pred EEEeCCCCCCChHHHHhhhCCCCCce
Q psy15208 158 IIHGELDEIIPLKDVFLWANPLDIPV 183 (1027)
Q Consensus 158 iIhG~~D~iVP~~~~~~l~~~~~~~~ 183 (1027)
+++|++|.++|++....+.+.+....
T Consensus 226 ~i~g~~D~~~~~~~~~~~~~~~~~~~ 251 (278)
T 3oos_A 226 IYCGKHDVQCPYIFSCEIANLIPNAT 251 (278)
T ss_dssp EEEETTCSSSCHHHHHHHHHHSTTEE
T ss_pred EEEeccCCCCCHHHHHHHHhhCCCcE
Confidence 99999999999999888777654333
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2.1e-16 Score=170.16 Aligned_cols=99 Identities=23% Similarity=0.301 Sum_probs=80.6
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
++|||+||++. +. ..|..+++.|+++||+|+++|+||||.|+... .+...+++|+.++++.+. ..+++|
T Consensus 24 ~pvvllHG~~~---~~--~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~~l~~l~----~~~~~l 94 (277)
T 1brt_A 24 QPVVLIHGFPL---SG--HSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLD----LQDAVL 94 (277)
T ss_dssp SEEEEECCTTC---CG--GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT----CCSEEE
T ss_pred CeEEEECCCCC---cH--HHHHHHHHHHhhCCCEEEEeCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhC----CCceEE
Confidence 34899999843 32 25788999999999999999999999998643 244567888888887763 348999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+||||||.+++.+|.++|+. +++++|++++
T Consensus 95 vGhS~Gg~va~~~a~~~p~~-~v~~lvl~~~ 124 (277)
T 1brt_A 95 VGFSTGTGEVARYVSSYGTA-RIAKVAFLAS 124 (277)
T ss_dssp EEEGGGHHHHHHHHHHHCST-TEEEEEEESC
T ss_pred EEECccHHHHHHHHHHcCcc-eEEEEEEecC
Confidence 99999999999999999862 4899999986
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.1e-16 Score=170.60 Aligned_cols=121 Identities=16% Similarity=0.086 Sum_probs=86.9
Q ss_pred EEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---C
Q psy15208 8 FNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---D 84 (1027)
Q Consensus 8 i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---~ 84 (1027)
-.+...+.++++..+.+.. .+++|||+||++. +... +|..+ ..++++||+|+++|+||||.|.... .
T Consensus 8 ~~~~~~g~~l~~~~~g~~~-----~~~~vvllHG~~~---~~~~-~~~~~-~~l~~~g~~vi~~D~~G~G~S~~~~~~~~ 77 (293)
T 1mtz_A 8 NYAKVNGIYIYYKLCKAPE-----EKAKLMTMHGGPG---MSHD-YLLSL-RDMTKEGITVLFYDQFGCGRSEEPDQSKF 77 (293)
T ss_dssp EEEEETTEEEEEEEECCSS-----CSEEEEEECCTTT---CCSG-GGGGG-GGGGGGTEEEEEECCTTSTTSCCCCGGGC
T ss_pred eEEEECCEEEEEEEECCCC-----CCCeEEEEeCCCC---cchh-HHHHH-HHHHhcCcEEEEecCCCCccCCCCCCCcc
Confidence 3444444477776665421 2367899999632 2211 23334 3456779999999999999998653 2
Q ss_pred CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 85 SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 85 ~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+...+++|+.++++.+. +..+++|+||||||.+++.+|.++|+ +++++|+++|.
T Consensus 78 ~~~~~~~dl~~~~~~l~---~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lvl~~~~ 131 (293)
T 1mtz_A 78 TIDYGVEEAEALRSKLF---GNEKVFLMGSSYGGALALAYAVKYQD--HLKGLIVSGGL 131 (293)
T ss_dssp SHHHHHHHHHHHHHHHH---TTCCEEEEEETHHHHHHHHHHHHHGG--GEEEEEEESCC
T ss_pred cHHHHHHHHHHHHHHhc---CCCcEEEEEecHHHHHHHHHHHhCch--hhheEEecCCc
Confidence 34556788888887772 22489999999999999999999998 79999999864
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.7e-16 Score=169.01 Aligned_cols=140 Identities=17% Similarity=0.150 Sum_probs=107.0
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-CCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY-DSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~-~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
.|+|||+||++. +.. .|..+++.|++. |+|+++|+||||.|+... .+...+++|+.++++.+. ..+++|
T Consensus 16 ~~~vvllHG~~~---~~~--~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~~~~~~~~a~dl~~~l~~l~----~~~~~l 85 (255)
T 3bf7_A 16 NSPIVLVHGLFG---SLD--NLGVLARDLVND-HNIIQVDVRNHGLSPREPVMNYPAMAQDLVDTLDALQ----IDKATF 85 (255)
T ss_dssp CCCEEEECCTTC---CTT--TTHHHHHHHTTT-SCEEEECCTTSTTSCCCSCCCHHHHHHHHHHHHHHHT----CSCEEE
T ss_pred CCCEEEEcCCcc---cHh--HHHHHHHHHHhh-CcEEEecCCCCCCCCCCCCcCHHHHHHHHHHHHHHcC----CCCeeE
Confidence 567899999853 322 377889999764 999999999999998643 244566777777777653 348999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEccCCC----c-----------------------------------------
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISVAVK----K----------------------------------------- 146 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~----~----------------------------------------- 146 (1027)
+||||||.+++.+|.++|+ +++++|++++.+. .
T Consensus 86 vGhS~Gg~va~~~a~~~p~--~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (255)
T 3bf7_A 86 IGHSMGGKAVMALTALAPD--RIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLL 163 (255)
T ss_dssp EEETHHHHHHHHHHHHCGG--GEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHTTTCCCHHHHHHHH
T ss_pred EeeCccHHHHHHHHHhCcH--hhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHhhhcchhHHHHHHH
Confidence 9999999999999999998 7999999864210 0
Q ss_pred -------C------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceE
Q psy15208 147 -------W------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVV 184 (1027)
Q Consensus 147 -------~------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L 184 (1027)
| .+..+++|+++++|++|.++|++....+.+.+....+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~ 226 (255)
T 3bf7_A 164 KSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQARA 226 (255)
T ss_dssp TTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHCTTEEE
T ss_pred HhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCCHHHHHHHHHHCCCCeE
Confidence 0 0235679999999999999999888877665543333
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1e-16 Score=171.36 Aligned_cols=116 Identities=13% Similarity=0.116 Sum_probs=88.1
Q ss_pred EEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--Cc
Q psy15208 9 NINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD--SG 86 (1027)
Q Consensus 9 ~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~--~~ 86 (1027)
.+...+.++++..+.+++ .|+|||+||++. +.. .|..+++.|+ +||+|+++|+||||.|..... +.
T Consensus 14 ~~~~~g~~l~~~~~g~~~------~~~vl~lHG~~~---~~~--~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~ 81 (299)
T 3g9x_A 14 YVEVLGERMHYVDVGPRD------GTPVLFLHGNPT---SSY--LWRNIIPHVA-PSHRCIAPDLIGMGKSDKPDLDYFF 81 (299)
T ss_dssp EEEETTEEEEEEEESCSS------SCCEEEECCTTC---CGG--GGTTTHHHHT-TTSCEEEECCTTSTTSCCCCCCCCH
T ss_pred eeeeCCeEEEEEecCCCC------CCEEEEECCCCc---cHH--HHHHHHHHHc-cCCEEEeeCCCCCCCCCCCCCcccH
Confidence 455555578777765533 467899999743 322 4667888886 599999999999999986532 33
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
..+++|+.++++.+ +..+++|+||||||.+++.+|.++|+ +++++|++++
T Consensus 82 ~~~~~~~~~~~~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~ 131 (299)
T 3g9x_A 82 DDHVRYLDAFIEAL----GLEEVVLVIHDWGSALGFHWAKRNPE--RVKGIACMEF 131 (299)
T ss_dssp HHHHHHHHHHHHHT----TCCSEEEEEEHHHHHHHHHHHHHSGG--GEEEEEEEEE
T ss_pred HHHHHHHHHHHHHh----CCCcEEEEEeCccHHHHHHHHHhcch--heeEEEEecC
Confidence 45566666666554 44589999999999999999999998 7999999984
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-16 Score=171.03 Aligned_cols=116 Identities=10% Similarity=0.165 Sum_probs=88.5
Q ss_pred EEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCc
Q psy15208 9 NINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSG 86 (1027)
Q Consensus 9 ~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~ 86 (1027)
.+...+.++++..+.+ .|+|||+||++. +.. .|..+++.|.++||+|+++|+||||.|.... .+.
T Consensus 13 ~~~~~g~~l~~~~~g~--------~~~vv~~HG~~~---~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~~~~~~ 79 (309)
T 3u1t_A 13 TVEVEGATIAYVDEGS--------GQPVLFLHGNPT---SSY--LWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDIEYRL 79 (309)
T ss_dssp EEEETTEEEEEEEEEC--------SSEEEEECCTTC---CGG--GGTTTHHHHHHTTCEEEEECCTTSTTSCCCSSCCCH
T ss_pred EEEECCeEEEEEEcCC--------CCEEEEECCCcc---hhh--hHHHHHHHHHhCCCEEEEEccCCCCCCCCCCcccCH
Confidence 3444455777655432 467999999743 322 4777888877789999999999999998643 234
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
..++.|+.++++.+ +..+++|+||||||.+++.+|.++|+ +++++|++++.
T Consensus 80 ~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~ 130 (309)
T 3u1t_A 80 QDHVAYMDGFIDAL----GLDDMVLVIHDWGSVIGMRHARLNPD--RVAAVAFMEAL 130 (309)
T ss_dssp HHHHHHHHHHHHHH----TCCSEEEEEEEHHHHHHHHHHHHCTT--TEEEEEEEEES
T ss_pred HHHHHHHHHHHHHc----CCCceEEEEeCcHHHHHHHHHHhChH--hheEEEEeccC
Confidence 55667776666665 33589999999999999999999998 79999999864
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-16 Score=176.22 Aligned_cols=113 Identities=19% Similarity=0.158 Sum_probs=89.1
Q ss_pred ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC----CCccchH
Q psy15208 15 GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY----DSGNGET 90 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~----~~~~~~~ 90 (1027)
.++++..+.|.+ ..|+|||+||++. +. ..|+.+++.|+++||+|+++|+||||.|+... .+...++
T Consensus 34 ~~l~y~~~G~~~-----~g~~vvllHG~~~---~~--~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~y~~~~~a 103 (310)
T 1b6g_A 34 LRAHYLDEGNSD-----AEDVFLCLHGEPT---WS--YLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHR 103 (310)
T ss_dssp CEEEEEEEECTT-----CSCEEEECCCTTC---CG--GGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHH
T ss_pred eEEEEEEeCCCC-----CCCEEEEECCCCC---ch--hhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCcCCcCHHHHH
Confidence 477776665422 1467899999853 22 24778899999989999999999999998532 2445678
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 91 DDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 91 ~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+|+.++++.+. ..+++|+||||||.+|+.+|.++|+ +++++|++++.
T Consensus 104 ~dl~~ll~~l~----~~~~~lvGhS~Gg~va~~~A~~~P~--rv~~Lvl~~~~ 150 (310)
T 1b6g_A 104 NFLLALIERLD----LRNITLVVQDWGGFLGLTLPMADPS--RFKRLIIMNAX 150 (310)
T ss_dssp HHHHHHHHHHT----CCSEEEEECTHHHHHHTTSGGGSGG--GEEEEEEESCC
T ss_pred HHHHHHHHHcC----CCCEEEEEcChHHHHHHHHHHhChH--hheEEEEeccc
Confidence 88888887764 3489999999999999999999999 89999999853
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=2.8e-16 Score=164.84 Aligned_cols=101 Identities=18% Similarity=0.195 Sum_probs=78.6
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---CccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD---SGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~---~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
.|+|||+||++ ++.. .|..+++.|+++||+|+++|+||||.|+.... +....++|+.++++.+ ....++
T Consensus 4 g~~vv~lHG~~---~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~ 75 (258)
T 3dqz_A 4 KHHFVLVHNAY---HGAW--IWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSL---PENEEV 75 (258)
T ss_dssp CCEEEEECCTT---CCGG--GGTTHHHHHHHTTCEEEEECCTTSTTCSSCGGGCCSHHHHHHHHHHHHHTS---CTTCCE
T ss_pred CCcEEEECCCC---Cccc--cHHHHHHHHHhCCCEEEEecCCCCcCCCCCCCccccHHHhHHHHHHHHHHh---cccCce
Confidence 37899999984 3322 47789999999999999999999999986432 3334444544444433 222689
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+|+||||||.+++.+|.++|+ +++++|++++.
T Consensus 76 ~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~ 107 (258)
T 3dqz_A 76 ILVGFSFGGINIALAADIFPA--KIKVLVFLNAF 107 (258)
T ss_dssp EEEEETTHHHHHHHHHTTCGG--GEEEEEEESCC
T ss_pred EEEEeChhHHHHHHHHHhChH--hhcEEEEecCC
Confidence 999999999999999999998 79999999974
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.6e-16 Score=174.41 Aligned_cols=112 Identities=15% Similarity=0.136 Sum_probs=88.5
Q ss_pred ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC----CCccchH
Q psy15208 15 GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY----DSGNGET 90 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~----~~~~~~~ 90 (1027)
.++++..+.|.+ ..|+|||+||++. +. ..|+.+++.|+++||+|+++|+||||.|+... .+...++
T Consensus 33 ~~l~y~~~G~~~-----~g~~vvllHG~~~---~~--~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~~~~~~~a 102 (297)
T 2xt0_A 33 LRMHYVDEGPRD-----AEHTFLCLHGEPS---WS--FLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVYTFGFHR 102 (297)
T ss_dssp CCEEEEEESCTT-----CSCEEEEECCTTC---CG--GGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHH
T ss_pred eEEEEEEccCCC-----CCCeEEEECCCCC---cc--eeHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCcccCCHHHHH
Confidence 478777665422 1467899999843 22 24778899999989999999999999998532 2445677
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 91 DDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 91 ~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+|+.++++.+. ..+++|+||||||.+|+.+|.++|+ +|+++|++++
T Consensus 103 ~dl~~ll~~l~----~~~~~lvGhS~Gg~va~~~A~~~P~--~v~~lvl~~~ 148 (297)
T 2xt0_A 103 RSLLAFLDALQ----LERVTLVCQDWGGILGLTLPVDRPQ--LVDRLIVMNT 148 (297)
T ss_dssp HHHHHHHHHHT----CCSEEEEECHHHHHHHTTHHHHCTT--SEEEEEEESC
T ss_pred HHHHHHHHHhC----CCCEEEEEECchHHHHHHHHHhChH--HhcEEEEECC
Confidence 88887777664 3489999999999999999999999 8999999986
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.69 E-value=3.3e-16 Score=169.08 Aligned_cols=161 Identities=13% Similarity=0.163 Sum_probs=115.0
Q ss_pred EEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---C
Q psy15208 9 NINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD---S 85 (1027)
Q Consensus 9 ~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~---~ 85 (1027)
.+...+.++++..+.+++ .|+|||+||++..++ ....|..+++.|++ +|+|+++|+||||.|..... +
T Consensus 11 ~~~~~g~~l~y~~~g~~g------~p~vvllHG~~~~~~--~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~~~~ 81 (285)
T 1c4x_A 11 RFPSGTLASHALVAGDPQ------SPAVVLLHGAGPGAH--AASNWRPIIPDLAE-NFFVVAPDLIGFGQSEYPETYPGH 81 (285)
T ss_dssp EECCTTSCEEEEEESCTT------SCEEEEECCCSTTCC--HHHHHGGGHHHHHT-TSEEEEECCTTSTTSCCCSSCCSS
T ss_pred EEEECCEEEEEEecCCCC------CCEEEEEeCCCCCCc--chhhHHHHHHHHhh-CcEEEEecCCCCCCCCCCCCcccc
Confidence 444444477776654322 466899999742112 22357777888876 59999999999999975432 3
Q ss_pred ccch----HHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc---------------
Q psy15208 86 GNGE----TDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK--------------- 146 (1027)
Q Consensus 86 ~~~~----~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~--------------- 146 (1027)
...+ ++|+.++++.+ +..+++|+||||||.+++.+|.++|+ +++++|++++....
T Consensus 82 ~~~~~~~~~~dl~~~l~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 155 (285)
T 1c4x_A 82 IMSWVGMRVEQILGLMNHF----GIEKSHIVGNSMGGAVTLQLVVEAPE--RFDKVALMGSVGAPMNARPPELARLLAFY 155 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHH----TCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCSSCCSSCCHHHHHHHTGG
T ss_pred hhhhhhhHHHHHHHHHHHh----CCCccEEEEEChHHHHHHHHHHhChH--HhheEEEeccCCCCCCccchhHHHHHHHh
Confidence 3445 66666666654 33589999999999999999999998 79999999864210
Q ss_pred ---------------------C------------------------------------------CCCCCCCcEEEEEeCC
Q psy15208 147 ---------------------W------------------------------------------LIPEVPKNTIIIHGEL 163 (1027)
Q Consensus 147 ---------------------~------------------------------------------~l~~i~~PvLiIhG~~ 163 (1027)
. .+..+++|++++||++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 235 (285)
T 1c4x_A 156 ADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQ 235 (285)
T ss_dssp GSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETT
T ss_pred ccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCC
Confidence 0 0134678999999999
Q ss_pred CCCCChHHHHhhhCCCCCceE
Q psy15208 164 DEIIPLKDVFLWANPLDIPVV 184 (1027)
Q Consensus 164 D~iVP~~~~~~l~~~~~~~~L 184 (1027)
|.++|++.+..+.+.+....+
T Consensus 236 D~~~p~~~~~~~~~~~~~~~~ 256 (285)
T 1c4x_A 236 DRIVPLDTSLYLTKHLKHAEL 256 (285)
T ss_dssp CSSSCTHHHHHHHHHCSSEEE
T ss_pred CeeeCHHHHHHHHHhCCCceE
Confidence 999999998877766544333
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.69 E-value=7.5e-16 Score=171.79 Aligned_cols=164 Identities=15% Similarity=0.137 Sum_probs=128.8
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
.+.+.+.+.+| +++++++.|++ .++.|+||++||++...+.+ ..+. .++++||.|+++|+||+|.|....
T Consensus 82 ~~~~~~~~~~g~~l~~~~~~P~~---~~~~p~vv~~HG~g~~~~~~-----~~~~-~~~~~G~~v~~~D~rG~g~s~~~~ 152 (346)
T 3fcy_A 82 CYDLYFTGVRGARIHAKYIKPKT---EGKHPALIRFHGYSSNSGDW-----NDKL-NYVAAGFTVVAMDVRGQGGQSQDV 152 (346)
T ss_dssp EEEEEEECGGGCEEEEEEEEESC---SSCEEEEEEECCTTCCSCCS-----GGGH-HHHTTTCEEEEECCTTSSSSCCCC
T ss_pred EEEEEEEcCCCCEEEEEEEecCC---CCCcCEEEEECCCCCCCCCh-----hhhh-HHHhCCcEEEEEcCCCCCCCCCCC
Confidence 45678888788 79999999976 35789999999986544433 2333 455789999999999999987543
Q ss_pred CC----------------------ccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEE
Q psy15208 84 DS----------------------GNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILIL 139 (1027)
Q Consensus 84 ~~----------------------~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVl 139 (1027)
.. +.....|+.++++++.... +..+++++||||||.+++.++.++|+ ++++|+
T Consensus 153 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~---v~~~vl 229 (346)
T 3fcy_A 153 GGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR---VRKVVS 229 (346)
T ss_dssp CCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT---CCEEEE
T ss_pred cccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc---ccEEEE
Confidence 21 1134689999999998754 23579999999999999999999986 899999
Q ss_pred EccCCCcC--------------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhh
Q psy15208 140 ISVAVKKW--------------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLW 175 (1027)
Q Consensus 140 i~p~~~~~--------------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l 175 (1027)
++|....+ .+.++++|+++++|+.|.++|++.+..+
T Consensus 230 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~ 309 (346)
T 3fcy_A 230 EYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAA 309 (346)
T ss_dssp ESCSSCCHHHHHHTTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHH
T ss_pred CCCcccCHHHHhhccccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHH
Confidence 99864210 1356789999999999999999999888
Q ss_pred hCCCC
Q psy15208 176 ANPLD 180 (1027)
Q Consensus 176 ~~~~~ 180 (1027)
.+.+.
T Consensus 310 ~~~~~ 314 (346)
T 3fcy_A 310 YNNIQ 314 (346)
T ss_dssp HTTCC
T ss_pred HHhcC
Confidence 88765
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.69 E-value=7.1e-16 Score=167.27 Aligned_cols=166 Identities=18% Similarity=0.080 Sum_probs=128.1
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCC-CChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGT-MDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs-~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
..+.+.+.+.+| ++.++++.|++ .++.|+||++||++ ++ .. .|.... .|+++||.|+++|+||+|.|..
T Consensus 55 ~~~~~~~~~~~g~~i~~~~~~P~~---~~~~p~vv~~HG~~---~~~~~--~~~~~~-~l~~~g~~v~~~d~rg~g~s~~ 125 (318)
T 1l7a_A 55 KVYRLTYKSFGNARITGWYAVPDK---EGPHPAIVKYHGYN---ASYDG--EIHEMV-NWALHGYATFGMLVRGQQRSED 125 (318)
T ss_dssp EEEEEEEEEGGGEEEEEEEEEESS---CSCEEEEEEECCTT---CCSGG--GHHHHH-HHHHTTCEEEEECCTTTSSSCC
T ss_pred EEEEEEEEccCCCEEEEEEEeeCC---CCCccEEEEEcCCC---CCCCC--Cccccc-chhhCCcEEEEecCCCCCCCCC
Confidence 345677888778 79999999976 35689999999974 33 22 244443 7778899999999999999986
Q ss_pred CCCC--------------------ccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEE
Q psy15208 82 TYDS--------------------GNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILIL 139 (1027)
Q Consensus 82 ~~~~--------------------~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVl 139 (1027)
.+.. +.....|+.++++++..... ..+++++||||||.+++.++..+|+ +.++|+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~---~~~~v~ 202 (318)
T 1l7a_A 126 TSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI---PKAAVA 202 (318)
T ss_dssp CCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC---CSEEEE
T ss_pred cccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC---ccEEEe
Confidence 5210 13468999999999987633 2579999999999999999999876 788888
Q ss_pred EccCCCcC------------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhC
Q psy15208 140 ISVAVKKW------------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 140 i~p~~~~~------------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~ 177 (1027)
.+|....+ .+..+.+|+++++|+.|.++|++.+..+.+
T Consensus 203 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~ 282 (318)
T 1l7a_A 203 DYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYN 282 (318)
T ss_dssp ESCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHH
T ss_pred cCCcccCHHHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHh
Confidence 88753210 134668999999999999999999888777
Q ss_pred CCCC
Q psy15208 178 PLDI 181 (1027)
Q Consensus 178 ~~~~ 181 (1027)
.+..
T Consensus 283 ~l~~ 286 (318)
T 1l7a_A 283 HLET 286 (318)
T ss_dssp HCCS
T ss_pred hcCC
Confidence 6553
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-16 Score=177.06 Aligned_cols=123 Identities=12% Similarity=0.073 Sum_probs=89.6
Q ss_pred EEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCC---
Q psy15208 8 FNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASSGTY--- 83 (1027)
Q Consensus 8 i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~~--- 83 (1027)
.++...+.++++..+.+.+. ..+.++|||+||++. +.. .|......|++ .||+|+++|+||||.|+...
T Consensus 31 ~~v~~~g~~l~y~~~G~~~~--~~~g~plvllHG~~~---~~~--~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~~ 103 (330)
T 3nwo_A 31 RTVPFGDHETWVQVTTPENA--QPHALPLIVLHGGPG---MAH--NYVANIAALADETGRTVIHYDQVGCGNSTHLPDAP 103 (330)
T ss_dssp EEEEETTEEEEEEEECCSSC--CTTCCCEEEECCTTT---CCS--GGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTSC
T ss_pred eeEeecCcEEEEEEecCccC--CCCCCcEEEECCCCC---Cch--hHHHHHHHhccccCcEEEEECCCCCCCCCCCCCCc
Confidence 34555556888888877431 012336899999743 322 24455666764 59999999999999997521
Q ss_pred ---CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 84 ---DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 84 ---~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
.+...+++|+.++++.+. ..+++|+||||||.+++.+|.++|+ ++.++|+++++
T Consensus 104 ~~~~~~~~~a~dl~~ll~~lg----~~~~~lvGhSmGG~va~~~A~~~P~--~v~~lvl~~~~ 160 (330)
T 3nwo_A 104 ADFWTPQLFVDEFHAVCTALG----IERYHVLGQSWGGMLGAEIAVRQPS--GLVSLAICNSP 160 (330)
T ss_dssp GGGCCHHHHHHHHHHHHHHHT----CCSEEEEEETHHHHHHHHHHHTCCT--TEEEEEEESCC
T ss_pred cccccHHHHHHHHHHHHHHcC----CCceEEEecCHHHHHHHHHHHhCCc--cceEEEEecCC
Confidence 133456778877777664 3489999999999999999999999 79999998764
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.68 E-value=5.5e-16 Score=165.76 Aligned_cols=160 Identities=15% Similarity=0.160 Sum_probs=122.0
Q ss_pred EEEEEecC--CceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 6 KFFNINGS--VGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 6 ~~i~I~t~--dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
+.+.+.+. ++...+.++.|.... .+++|+|||+||++ ++.. .|..+++.|+++||.|+++|+||+|.+..
T Consensus 26 ~~~~~~~~~~~~~~~~~l~~p~~~~-~~~~p~vv~~HG~~---~~~~--~~~~~~~~l~~~G~~v~~~d~~g~g~~~~-- 97 (262)
T 1jfr_A 26 SQTSVSSLVASGFGGGTIYYPTSTA-DGTFGAVVISPGFT---AYQS--SIAWLGPRLASQGFVVFTIDTNTTLDQPD-- 97 (262)
T ss_dssp EEEEECTTTCSSSCCEEEEEESCCT-TCCEEEEEEECCTT---CCGG--GTTTHHHHHHTTTCEEEEECCSSTTCCHH--
T ss_pred cceEecceeccCCCceeEEecCCCC-CCCCCEEEEeCCcC---CCch--hHHHHHHHHHhCCCEEEEeCCCCCCCCCc--
Confidence 34445543 332234555565311 24678999999974 3332 46678999999999999999999997653
Q ss_pred CCccchHHHHHHHHHHHHH------hCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCCCCCCCCcEE
Q psy15208 84 DSGNGETDDMEILLRYIQK------KYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWLIPEVPKNTI 157 (1027)
Q Consensus 84 ~~~~~~~~Dv~avl~~L~~------~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~l~~i~~PvL 157 (1027)
....|+..+++++.. ..+..+++|+||||||.+++.++.++|+ ++++|+++|......+..+.+|++
T Consensus 98 ----~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~p~~~~~~~~~~~~P~l 170 (262)
T 1jfr_A 98 ----SRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS---LKAAIPLTGWNTDKTWPELRTPTL 170 (262)
T ss_dssp ----HHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT---CSEEEEESCCCSCCCCTTCCSCEE
T ss_pred ----hhHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc---ceEEEeecccCccccccccCCCEE
Confidence 246788888888876 2334579999999999999999999886 899999999876666788899999
Q ss_pred EEEeCCCCCCChHH-HHhhhCCCC
Q psy15208 158 IIHGELDEIIPLKD-VFLWANPLD 180 (1027)
Q Consensus 158 iIhG~~D~iVP~~~-~~~l~~~~~ 180 (1027)
++||++|.++|++. ...+.+.+.
T Consensus 171 ~i~G~~D~~~~~~~~~~~~~~~l~ 194 (262)
T 1jfr_A 171 VVGADGDTVAPVATHSKPFYESLP 194 (262)
T ss_dssp EEEETTCSSSCTTTTHHHHHHHSC
T ss_pred EEecCccccCCchhhHHHHHHHhh
Confidence 99999999999987 877666543
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.3e-15 Score=162.22 Aligned_cols=118 Identities=18% Similarity=0.081 Sum_probs=91.1
Q ss_pred EEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--
Q psy15208 7 FFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY-- 83 (1027)
Q Consensus 7 ~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~-- 83 (1027)
...+.+.+| ++++..+.+.+ +.|+|||+||++. +. ..|..+++.|++ +|+|+++|+||||.|+...
T Consensus 7 ~~~~~~~~g~~l~~~~~g~~~-----~~~~vvllHG~~~---~~--~~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~ 75 (285)
T 3bwx_A 7 DRYWTSSDGLRLHFRAYEGDI-----SRPPVLCLPGLTR---NA--RDFEDLATRLAG-DWRVLCPEMRGRGDSDYAKDP 75 (285)
T ss_dssp EEEEECTTSCEEEEEEECBCT-----TSCCEEEECCTTC---CG--GGGHHHHHHHBB-TBCEEEECCTTBTTSCCCSSG
T ss_pred cCeeecCCCceEEEEEcCCCC-----CCCcEEEECCCCc---ch--hhHHHHHHHhhc-CCEEEeecCCCCCCCCCCCCc
Confidence 345666666 78877776542 2567899999743 32 247889999987 9999999999999998542
Q ss_pred --CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEc
Q psy15208 84 --DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILIS 141 (1027)
Q Consensus 84 --~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~ 141 (1027)
.+...+++|+.++++.+. ..+++|+||||||.+|+.+|.++|+ +++++|+++
T Consensus 76 ~~~~~~~~a~dl~~~l~~l~----~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lvl~~ 129 (285)
T 3bwx_A 76 MTYQPMQYLQDLEALLAQEG----IERFVAIGTSLGGLLTMLLAAANPA--RIAAAVLND 129 (285)
T ss_dssp GGCSHHHHHHHHHHHHHHHT----CCSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEES
T ss_pred cccCHHHHHHHHHHHHHhcC----CCceEEEEeCHHHHHHHHHHHhCch--heeEEEEec
Confidence 133456778777777653 3479999999999999999999998 799999975
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=4.7e-16 Score=167.19 Aligned_cols=101 Identities=15% Similarity=0.205 Sum_probs=80.4
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---CCccchHHHHHHHHHHHHHhCCCCc
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---DSGNGETDDMEILLRYIQKKYPYLP 108 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---~~~~~~~~Dv~avl~~L~~~~~~~p 108 (1027)
..|+|||+||++. +. ..|..+++.|+++||+|+++|+||||.|+... .+.+.+++|+.++++.+. ...+
T Consensus 9 ~g~~vvllHG~~~---~~--~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~ 80 (264)
T 2wfl_A 9 QQKHFVLVHGGCL---GA--WIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIP---PDEK 80 (264)
T ss_dssp CCCEEEEECCTTC---CG--GGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHHSC---TTCC
T ss_pred CCCeEEEECCCcc---cc--chHHHHHHHHHhCCCEEEEeecCCCCCCCCCcccccCHHHHHHHHHHHHHHhC---CCCC
Confidence 4678999999842 22 24778999998889999999999999997532 244556777666666542 2358
Q ss_pred EEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 109 IILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 109 viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
++|+||||||.+++.+|.++|+ +++++|++++
T Consensus 81 ~~lvGhSmGG~va~~~a~~~p~--~v~~lvl~~~ 112 (264)
T 2wfl_A 81 VVLLGHSFGGMSLGLAMETYPE--KISVAVFMSA 112 (264)
T ss_dssp EEEEEETTHHHHHHHHHHHCGG--GEEEEEEESS
T ss_pred eEEEEeChHHHHHHHHHHhChh--hhceeEEEee
Confidence 9999999999999999999999 7999999875
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=3.7e-16 Score=164.79 Aligned_cols=103 Identities=15% Similarity=0.146 Sum_probs=81.4
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---CCccchHHHHHHHHHHHHHhCCCC
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---DSGNGETDDMEILLRYIQKKYPYL 107 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---~~~~~~~~Dv~avl~~L~~~~~~~ 107 (1027)
..+|+|||+||++ ++. ..|..+++.|+++||+|+++|+||||.|.... .+...+++|+.++++.+ .+..
T Consensus 10 ~~~~~vvllHG~~---~~~--~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l---~~~~ 81 (267)
T 3sty_A 10 FVKKHFVLVHAAF---HGA--WCWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASL---PANE 81 (267)
T ss_dssp CCCCEEEEECCTT---CCG--GGGHHHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHTS---CTTS
T ss_pred CCCCeEEEECCCC---CCc--chHHHHHHHHHhcCCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHhc---CCCC
Confidence 4578999999974 332 25788999999999999999999999998753 23344455555444433 2356
Q ss_pred cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 108 PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 108 pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+++|+||||||.+++.+|.++|+ +++++|++++.
T Consensus 82 ~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 115 (267)
T 3sty_A 82 KIILVGHALGGLAISKAMETFPE--KISVAVFLSGL 115 (267)
T ss_dssp CEEEEEETTHHHHHHHHHHHSGG--GEEEEEEESCC
T ss_pred CEEEEEEcHHHHHHHHHHHhChh--hcceEEEecCC
Confidence 89999999999999999999998 79999999974
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.67 E-value=9.8e-17 Score=169.32 Aligned_cols=138 Identities=15% Similarity=0.197 Sum_probs=107.2
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC------CccchHHHHHHHHHHHHHhCCC
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD------SGNGETDDMEILLRYIQKKYPY 106 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~------~~~~~~~Dv~avl~~L~~~~~~ 106 (1027)
+|+|||+||++. +.. .|..+++.|++ ||+|+++|+||||.|..... +....++|+.++++.+ +.
T Consensus 28 ~~~vv~lHG~~~---~~~--~~~~~~~~l~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 97 (282)
T 3qvm_A 28 EKTVLLAHGFGC---DQN--MWRFMLPELEK-QFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVAL----DL 97 (282)
T ss_dssp SCEEEEECCTTC---CGG--GGTTTHHHHHT-TSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHHHHHT----TC
T ss_pred CCeEEEECCCCC---Ccc--hHHHHHHHHhc-CceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHHHHHc----CC
Confidence 488999999743 322 46778899987 99999999999999986421 3334555555555543 44
Q ss_pred CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc----------------------------------------
Q psy15208 107 LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK---------------------------------------- 146 (1027)
Q Consensus 107 ~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~---------------------------------------- 146 (1027)
.+++|+||||||.+++.++.++|+ +++++|+++|....
T Consensus 98 ~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (282)
T 3qvm_A 98 VNVSIIGHSVSSIIAGIASTHVGD--RISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMG 175 (282)
T ss_dssp CSEEEEEETHHHHHHHHHHHHHGG--GEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHC
T ss_pred CceEEEEecccHHHHHHHHHhCch--hhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccC
Confidence 689999999999999999999998 79999999986420
Q ss_pred ------------------------------------CCCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 147 ------------------------------------WLIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 147 ------------------------------------~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
..+..+++|+++++|++|.++|++....+.+.+...
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 247 (282)
T 3qvm_A 176 ASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIPNS 247 (282)
T ss_dssp TTSCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHSSSE
T ss_pred CccchhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhCCCC
Confidence 013567899999999999999999988777665433
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.67 E-value=3.1e-16 Score=170.42 Aligned_cols=142 Identities=18% Similarity=0.139 Sum_probs=104.8
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHH-HHHHhCCcEEEEEcCCCCCCCCCCCC---CccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLV-RVMLSLGYISIRMNFRGVGASSGTYD---SGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la-~~La~~Gy~Vla~DlrGhG~S~g~~~---~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
|+|||+||++..+++ ...|..++ +.|++ +|+|+++|+||||.|+.... +...+++|+.++++.+ +..++
T Consensus 34 ~~vvllHG~~~~~~~--~~~w~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l----~~~~~ 106 (286)
T 2puj_A 34 ETVIMLHGGGPGAGG--WSNYYRNVGPFVDA-GYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL----DIDRA 106 (286)
T ss_dssp SEEEEECCCSTTCCH--HHHHTTTHHHHHHT-TCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHHT----TCCCE
T ss_pred CcEEEECCCCCCCCc--HHHHHHHHHHHHhc-cCEEEEECCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHh----CCCce
Confidence 578999997411122 23566777 88876 49999999999999986432 2344566666555543 44589
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC--------c--------------------------------C--
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK--------K--------------------------------W-- 147 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~--------~--------------------------------~-- 147 (1027)
+|+||||||.+|+.+|.++|+ +++++|++++... . .
T Consensus 107 ~lvGhS~GG~va~~~A~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (286)
T 2puj_A 107 HLVGNAMGGATALNFALEYPD--RIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITE 184 (286)
T ss_dssp EEEEETHHHHHHHHHHHHCGG--GEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGGCCH
T ss_pred EEEEECHHHHHHHHHHHhChH--hhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHHHhcCCccCCH
Confidence 999999999999999999999 7999999986321 0 0
Q ss_pred ------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceE
Q psy15208 148 ------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVV 184 (1027)
Q Consensus 148 ------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L 184 (1027)
.+..+++|+|++||++|.++|++.+..+.+.++...+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~ 257 (286)
T 2puj_A 185 ELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARL 257 (286)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSSSEEE
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHHHHHHHHHHCCCCeE
Confidence 0124579999999999999999988877766544333
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.67 E-value=5e-16 Score=165.00 Aligned_cols=140 Identities=16% Similarity=0.197 Sum_probs=114.4
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC--CCCccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT--YDSGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~--~~~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
.+|+|||+||++ ++.. .|..+++.|+++||.|+++|+||||.|.+. ..+....++|+.++++++... ..++
T Consensus 39 ~~~~vv~~HG~~---~~~~--~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~i 111 (270)
T 3rm3_A 39 GPVGVLLVHGFT---GTPH--SMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGWLKQR--CQTI 111 (270)
T ss_dssp SSEEEEEECCTT---CCGG--GTHHHHHHHHHTTCEEEECCCTTCSSCHHHHHTCCHHHHHHHHHHHHHHHHTT--CSEE
T ss_pred CCeEEEEECCCC---CChh--HHHHHHHHHHHCCCEEEEeCCCCCCCCccccccCCHHHHHHHHHHHHHHHHhh--CCcE
Confidence 468999999974 3332 478899999999999999999999999742 135567789999999999865 4589
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC------------------------------------------
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------------------------------------------ 147 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------------------------------------------ 147 (1027)
+|+||||||.+++.++.++|+ ++++|+++|+....
T Consensus 112 ~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (270)
T 3rm3_A 112 FVTGLSMGGTLTLYLAEHHPD---ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASLL 188 (270)
T ss_dssp EEEEETHHHHHHHHHHHHCTT---CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCCCCCSEEEHHHHH
T ss_pred EEEEEcHhHHHHHHHHHhCCC---ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHhhcccccChhHHH
Confidence 999999999999999999986 89999999853200
Q ss_pred -----------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCC
Q psy15208 148 -----------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDI 181 (1027)
Q Consensus 148 -----------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~ 181 (1027)
.+..+++|+++++|++|.++|++....+.+.+..
T Consensus 189 ~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 233 (270)
T 3rm3_A 189 QLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISS 233 (270)
T ss_dssp HHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCC
T ss_pred HHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCC
Confidence 1346789999999999999999998877765543
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.7e-16 Score=168.76 Aligned_cols=100 Identities=26% Similarity=0.354 Sum_probs=80.9
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
++|||+||++. +. ..|..+++.|+++||+|+++|+||||.|.... .+...+++|+.++++.+. ..+++|
T Consensus 24 ~pvvllHG~~~---~~--~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~----~~~~~l 94 (279)
T 1hkh_A 24 QPVVLIHGYPL---DG--HSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLETLD----LRDVVL 94 (279)
T ss_dssp EEEEEECCTTC---CG--GGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT----CCSEEE
T ss_pred CcEEEEcCCCc---hh--hHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC----CCceEE
Confidence 34899999843 22 24788999999999999999999999998643 234567788888887764 348999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+||||||.+++.+|.++|+. +++++|++++.
T Consensus 95 vGhS~Gg~va~~~a~~~p~~-~v~~lvl~~~~ 125 (279)
T 1hkh_A 95 VGFSMGTGELARYVARYGHE-RVAKLAFLASL 125 (279)
T ss_dssp EEETHHHHHHHHHHHHHCST-TEEEEEEESCC
T ss_pred EEeChhHHHHHHHHHHcCcc-ceeeEEEEccC
Confidence 99999999999999999862 58999999863
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.67 E-value=8.4e-16 Score=167.66 Aligned_cols=122 Identities=15% Similarity=0.106 Sum_probs=93.2
Q ss_pred eEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCCC
Q psy15208 5 TKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGV-GASSGTY 83 (1027)
Q Consensus 5 ~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGh-G~S~g~~ 83 (1027)
.+...+...+++++++.+.+. ..|+|||+||++ ++.. .|..+++.|++ ||+|+++|+||| |.|....
T Consensus 45 ~~~~~v~~~~~~~~~~~~g~~------~~~~vv~lHG~~---~~~~--~~~~~~~~L~~-g~~vi~~D~~G~gG~s~~~~ 112 (306)
T 2r11_A 45 CKSFYISTRFGQTHVIASGPE------DAPPLVLLHGAL---FSST--MWYPNIADWSS-KYRTYAVDIIGDKNKSIPEN 112 (306)
T ss_dssp CEEEEECCTTEEEEEEEESCT------TSCEEEEECCTT---TCGG--GGTTTHHHHHH-HSEEEEECCTTSSSSCEECS
T ss_pred cceEEEecCCceEEEEeeCCC------CCCeEEEECCCC---CCHH--HHHHHHHHHhc-CCEEEEecCCCCCCCCCCCC
Confidence 345677788888887776543 357899999974 3322 36778888987 999999999999 8876532
Q ss_pred --CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 84 --DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 84 --~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
.+....+.|+.++++.+ +..+++|+||||||.+++.+|.++|+ +++++|+++|..
T Consensus 113 ~~~~~~~~~~~l~~~l~~l----~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~ 169 (306)
T 2r11_A 113 VSGTRTDYANWLLDVFDNL----GIEKSHMIGLSLGGLHTMNFLLRMPE--RVKSAAILSPAE 169 (306)
T ss_dssp CCCCHHHHHHHHHHHHHHT----TCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCSS
T ss_pred CCCCHHHHHHHHHHHHHhc----CCCceeEEEECHHHHHHHHHHHhCcc--ceeeEEEEcCcc
Confidence 23445666666666554 44589999999999999999999998 799999999753
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.66 E-value=6.4e-16 Score=170.53 Aligned_cols=152 Identities=17% Similarity=0.193 Sum_probs=123.0
Q ss_pred CCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHH
Q psy15208 13 SVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDD 92 (1027)
Q Consensus 13 ~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~D 92 (1027)
.+|.....++.|... .+.|+|||+||++ ++. ..|..+++.|+++||.|+++|+||+|.|... ...|
T Consensus 79 ~~g~~~~~~~~p~~~---~~~p~vv~~HG~~---~~~--~~~~~~~~~la~~G~~vv~~d~~g~g~s~~~------~~~d 144 (306)
T 3vis_A 79 ADGFGGGTIYYPREN---NTYGAIAISPGYT---GTQ--SSIAWLGERIASHGFVVIAIDTNTTLDQPDS------RARQ 144 (306)
T ss_dssp CSSSCCEEEEEESSC---SCEEEEEEECCTT---CCH--HHHHHHHHHHHTTTEEEEEECCSSTTCCHHH------HHHH
T ss_pred cCCCcceEEEeeCCC---CCCCEEEEeCCCc---CCH--HHHHHHHHHHHhCCCEEEEecCCCCCCCcch------HHHH
Confidence 445444566677652 3688999999973 332 3578899999999999999999999988642 4578
Q ss_pred HHHHHHHHHHh------C--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCCCCCCCCcEEEEEeCCC
Q psy15208 93 MEILLRYIQKK------Y--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWLIPEVPKNTIIIHGELD 164 (1027)
Q Consensus 93 v~avl~~L~~~------~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~l~~i~~PvLiIhG~~D 164 (1027)
+...++++... . +..+++++||||||.+++.++.++|+ ++++|+++|......+..+.+|++++||++|
T Consensus 145 ~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~---v~~~v~~~~~~~~~~~~~~~~P~lii~G~~D 221 (306)
T 3vis_A 145 LNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD---LKAAIPLTPWHLNKSWRDITVPTLIIGAEYD 221 (306)
T ss_dssp HHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT---CSEEEEESCCCSCCCCTTCCSCEEEEEETTC
T ss_pred HHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC---eeEEEEeccccCccccccCCCCEEEEecCCC
Confidence 88888888775 2 33479999999999999999999886 8999999998777678889999999999999
Q ss_pred CCCChH-HHHhhhCCCCC
Q psy15208 165 EIIPLK-DVFLWANPLDI 181 (1027)
Q Consensus 165 ~iVP~~-~~~~l~~~~~~ 181 (1027)
.++|++ +...+.+.+..
T Consensus 222 ~~~~~~~~~~~~~~~l~~ 239 (306)
T 3vis_A 222 TIASVTLHSKPFYNSIPS 239 (306)
T ss_dssp SSSCTTTTHHHHHHTCCT
T ss_pred cccCcchhHHHHHHHhcc
Confidence 999998 57777666543
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2e-16 Score=166.07 Aligned_cols=138 Identities=16% Similarity=0.163 Sum_probs=107.9
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC---C---CCccchHHHHHHHHHHHHHhCC
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT---Y---DSGNGETDDMEILLRYIQKKYP 105 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~---~---~~~~~~~~Dv~avl~~L~~~~~ 105 (1027)
.+|+|||+||++. +. ..|..+++.|++ ||+|+++|+||||.|... . .+....++|+.++++.+ +
T Consensus 19 ~~p~vv~~HG~~~---~~--~~~~~~~~~l~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 88 (269)
T 4dnp_A 19 GERVLVLAHGFGT---DQ--SAWNRILPFFLR-DYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLLHILDAL----G 88 (269)
T ss_dssp CSSEEEEECCTTC---CG--GGGTTTGGGGTT-TCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHHHHHHHT----T
T ss_pred CCCEEEEEeCCCC---cH--HHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHHHHHHhc----C
Confidence 3578999999743 32 246778888887 999999999999999751 1 13455666766666554 4
Q ss_pred CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-----C---------------------------------
Q psy15208 106 YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-----W--------------------------------- 147 (1027)
Q Consensus 106 ~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-----~--------------------------------- 147 (1027)
..+++|+||||||.+++.+|.++|+ +++++|++++.... +
T Consensus 89 ~~~~~l~GhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (269)
T 4dnp_A 89 IDCCAYVGHSVSAMIGILASIRRPE--LFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVG 166 (269)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHCTT--TEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHC
T ss_pred CCeEEEEccCHHHHHHHHHHHhCcH--hhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhcc
Confidence 4589999999999999999999998 79999999975320 0
Q ss_pred ------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCC
Q psy15208 148 ------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDI 181 (1027)
Q Consensus 148 ------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~ 181 (1027)
.+..+++|+++++|++|.++|++....+.+.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 236 (269)
T 4dnp_A 167 ADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGG 236 (269)
T ss_dssp SSCHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHSSS
T ss_pred CCChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhCCC
Confidence 1346789999999999999999999887776554
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.66 E-value=8.9e-16 Score=165.80 Aligned_cols=168 Identities=12% Similarity=0.067 Sum_probs=125.2
Q ss_pred eEEEEEecCCc-eEEEEEEecCCcc---ccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIK---LLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS 80 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~---~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~ 80 (1027)
.+.+.+.+.+| .+...+| |+... ..++.|+|||+||+++.+++ ...|..+++.|+++||.|+++|+||+|.+.
T Consensus 19 ~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~ 95 (283)
T 3bjr_A 19 GMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIP--VAQAESLAMAFAGHGYQAFYLEYTLLTDQQ 95 (283)
T ss_dssp SSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCC--HHHHHHHHHHHHTTTCEEEEEECCCTTTCS
T ss_pred CcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCC--ccccHHHHHHHHhCCcEEEEEeccCCCccc
Confidence 34566776666 5777777 65310 13568999999996544443 335788999999999999999999999874
Q ss_pred CCCCCccchHHHHHHHHHHHHHhC-----CCCcEEEEEechhHHHHHHHHHhcCCc-----------CCccEEEEEccCC
Q psy15208 81 GTYDSGNGETDDMEILLRYIQKKY-----PYLPIILAGFSFGTFVQAKLQKRLDKE-----------ISIKILILISVAV 144 (1027)
Q Consensus 81 g~~~~~~~~~~Dv~avl~~L~~~~-----~~~pviLVGhSmGG~vAl~~A~~~p~~-----------~~V~gLVli~p~~ 144 (1027)
. .......|+..+++++.... +..+++|+||||||.+++.++.++|+. .+++++++++|..
T Consensus 96 ~---~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~ 172 (283)
T 3bjr_A 96 P---LGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVI 172 (283)
T ss_dssp S---CBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCC
T ss_pred c---CchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCcc
Confidence 1 22346788888888887632 224799999999999999999999862 2389999998865
Q ss_pred Cc------------------------CCCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 145 KK------------------------WLIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 145 ~~------------------------~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
.. ..+..+.+|++++||++|.++|++.+..+++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~ 230 (283)
T 3bjr_A 173 SPLLGFPKDDATLATWTPTPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATA 230 (283)
T ss_dssp CTTSBC--------CCCCCGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHH
T ss_pred ccccccccccchHHHHHHHhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHH
Confidence 20 12456678999999999999999888766654
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.66 E-value=7.1e-16 Score=165.06 Aligned_cols=118 Identities=16% Similarity=0.127 Sum_probs=88.6
Q ss_pred EEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-
Q psy15208 6 KFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD- 84 (1027)
Q Consensus 6 ~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~- 84 (1027)
+...+...+.++++..+. ..|+|||+||++. +.. .|..+++.|++ ||+|+++|+||||.|.....
T Consensus 14 ~~~~~~~~g~~l~~~~~g--------~~~~vv~lHG~~~---~~~--~~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~ 79 (306)
T 3r40_A 14 GSEWINTSSGRIFARVGG--------DGPPLLLLHGFPQ---THV--MWHRVAPKLAE-RFKVIVADLPGYGWSDMPESD 79 (306)
T ss_dssp EEEEECCTTCCEEEEEEE--------CSSEEEEECCTTC---CGG--GGGGTHHHHHT-TSEEEEECCTTSTTSCCCCCC
T ss_pred ceEEEEeCCEEEEEEEcC--------CCCeEEEECCCCC---CHH--HHHHHHHHhcc-CCeEEEeCCCCCCCCCCCCCC
Confidence 334555555578776643 2468999999843 332 47788899987 99999999999999986543
Q ss_pred ------CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 85 ------SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 85 ------~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+...+++|+.++++. .+..+++|+||||||.+++.+|.++|+ +++++|++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 138 (306)
T 3r40_A 80 EQHTPYTKRAMAKQLIEAMEQ----LGHVHFALAGHNRGARVSYRLALDSPG--RLSKLAVLDIL 138 (306)
T ss_dssp TTCGGGSHHHHHHHHHHHHHH----TTCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCC
T ss_pred cccCCCCHHHHHHHHHHHHHH----hCCCCEEEEEecchHHHHHHHHHhChh--hccEEEEecCC
Confidence 223445555555544 345589999999999999999999998 79999999964
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.66 E-value=8e-16 Score=161.45 Aligned_cols=151 Identities=14% Similarity=0.051 Sum_probs=114.9
Q ss_pred EecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-CCcc
Q psy15208 10 INGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY-DSGN 87 (1027)
Q Consensus 10 I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~-~~~~ 87 (1027)
+.+.+| ++++..+.+ .|+|||+||++ ++.. .|..+++.|+ +||+|+++|+||||.|.... .+..
T Consensus 7 ~~~~~g~~l~~~~~g~--------~~~vv~lHG~~---~~~~--~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~~~~~~~ 72 (262)
T 3r0v_A 7 VPSSDGTPIAFERSGS--------GPPVVLVGGAL---STRA--GGAPLAERLA-PHFTVICYDRRGRGDSGDTPPYAVE 72 (262)
T ss_dssp EECTTSCEEEEEEEEC--------SSEEEEECCTT---CCGG--GGHHHHHHHT-TTSEEEEECCTTSTTCCCCSSCCHH
T ss_pred EEcCCCcEEEEEEcCC--------CCcEEEECCCC---cChH--HHHHHHHHHh-cCcEEEEEecCCCcCCCCCCCCCHH
Confidence 455566 677655432 36789999974 3332 4788999998 79999999999999998643 2345
Q ss_pred chHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC--------------------
Q psy15208 88 GETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW-------------------- 147 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~-------------------- 147 (1027)
..++|+.++++.+ + .+++|+||||||.+++.+|.++| +++++|+++|.....
T Consensus 73 ~~~~~~~~~~~~l----~-~~~~l~G~S~Gg~ia~~~a~~~p---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (262)
T 3r0v_A 73 REIEDLAAIIDAA----G-GAAFVFGMSSGAGLSLLAAASGL---PITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAE 144 (262)
T ss_dssp HHHHHHHHHHHHT----T-SCEEEEEETHHHHHHHHHHHTTC---CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc----C-CCeEEEEEcHHHHHHHHHHHhCC---CcceEEEEcCCcccccccchhhhHHHHHHHHHhhc
Confidence 5667776666654 3 58999999999999999999987 499999999753210
Q ss_pred --------------------------------------------------------CCCCCCCcEEEEEeCCCCCCChHH
Q psy15208 148 --------------------------------------------------------LIPEVPKNTIIIHGELDEIIPLKD 171 (1027)
Q Consensus 148 --------------------------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~ 171 (1027)
.+..+++|+++++|++|.++|++.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 224 (262)
T 3r0v_A 145 GRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAWIRHT 224 (262)
T ss_dssp TCHHHHHHHHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHHHHHH
T ss_pred cchhhHHHHHhhcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCCCHHH
Confidence 024678999999999999999999
Q ss_pred HHhhhCCCCCc
Q psy15208 172 VFLWANPLDIP 182 (1027)
Q Consensus 172 ~~~l~~~~~~~ 182 (1027)
...+.+.+...
T Consensus 225 ~~~~~~~~~~~ 235 (262)
T 3r0v_A 225 AQELADTIPNA 235 (262)
T ss_dssp HHHHHHHSTTE
T ss_pred HHHHHHhCCCC
Confidence 88887765443
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.65 E-value=8.3e-16 Score=164.78 Aligned_cols=100 Identities=15% Similarity=0.148 Sum_probs=78.7
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---CCccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---DSGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---~~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
+++|||+||++. +. ..|..+++.|+++||+|+++|+||||.|+... .+.+..++|+.++++.+. ...++
T Consensus 3 ~~~vvllHG~~~---~~--~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~ 74 (257)
T 3c6x_A 3 FAHFVLIHTICH---GA--WIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALP---PGEKV 74 (257)
T ss_dssp CCEEEEECCTTC---CG--GGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHTSC---TTCCE
T ss_pred CCcEEEEcCCcc---Cc--CCHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcccccCHHHHHHHHHHHHHhcc---ccCCe
Confidence 467899999742 21 24778999999889999999999999997532 244556666666665441 23589
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+|+||||||.+++.+|.++|+ +++++|++++
T Consensus 75 ~lvGhSmGG~va~~~a~~~p~--~v~~lVl~~~ 105 (257)
T 3c6x_A 75 ILVGESCGGLNIAIAADKYCE--KIAAAVFHNS 105 (257)
T ss_dssp EEEEEETHHHHHHHHHHHHGG--GEEEEEEEEE
T ss_pred EEEEECcchHHHHHHHHhCch--hhheEEEEec
Confidence 999999999999999999999 7999998875
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.2e-15 Score=176.15 Aligned_cols=118 Identities=14% Similarity=0.149 Sum_probs=90.3
Q ss_pred EEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-
Q psy15208 7 FFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD- 84 (1027)
Q Consensus 7 ~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~- 84 (1027)
...+.+++| ++++..+. ..|+|||+||++. +.. .|..+++.|+++||+|+++|+||||.|.....
T Consensus 239 ~~~~~~~dg~~l~~~~~g--------~~p~vv~~HG~~~---~~~--~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~~ 305 (555)
T 3i28_A 239 HGYVTVKPRVRLHFVELG--------SGPAVCLCHGFPE---SWY--SWRYQIPALAQAGYRVLAMDMKGYGESSAPPEI 305 (555)
T ss_dssp EEEEEEETTEEEEEEEEC--------SSSEEEEECCTTC---CGG--GGTTHHHHHHHTTCEEEEECCTTSTTSCCCSCG
T ss_pred eeEEEeCCCcEEEEEEcC--------CCCEEEEEeCCCC---chh--HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCc
Confidence 345666666 66655442 2478999999743 322 47788999999999999999999999986532
Q ss_pred ---CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 85 ---SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 85 ---~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+...++.|+.++++.+ +..+++|+||||||.+++.+|.++|+ +++++|+++++
T Consensus 306 ~~~~~~~~~~d~~~~~~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 361 (555)
T 3i28_A 306 EEYCMEVLCKEMVTFLDKL----GLSQAVFIGHDWGGMLVWYMALFYPE--RVRAVASLNTP 361 (555)
T ss_dssp GGGSHHHHHHHHHHHHHHH----TCSCEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCC
T ss_pred ccccHHHHHHHHHHHHHHc----CCCcEEEEEecHHHHHHHHHHHhChH--heeEEEEEccC
Confidence 2344566666666655 34489999999999999999999998 79999999864
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.5e-15 Score=167.40 Aligned_cols=116 Identities=20% Similarity=0.197 Sum_probs=88.7
Q ss_pred EecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC--CC---
Q psy15208 10 INGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT--YD--- 84 (1027)
Q Consensus 10 I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~--~~--- 84 (1027)
+...+.++++..+. + .|+|||+||++. +. ..|..+++.|+++||+|+++|+||||.|+.. ..
T Consensus 16 ~~~~g~~l~y~~~G--~------g~~vvllHG~~~---~~--~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~ 82 (328)
T 2cjp_A 16 VAVNGLNMHLAELG--E------GPTILFIHGFPE---LW--YSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSK 82 (328)
T ss_dssp EEETTEEEEEEEEC--S------SSEEEEECCTTC---CG--GGGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGG
T ss_pred ecCCCcEEEEEEcC--C------CCEEEEECCCCC---ch--HHHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCccc
Confidence 44434477666543 1 367999999843 32 2478899999888999999999999999754 21
Q ss_pred -CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 85 -SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 85 -~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+...+++|+.++++.+.. ...+++|+||||||.+|+.+|.++|+ +++++|++++
T Consensus 83 ~~~~~~a~dl~~~l~~l~~--~~~~~~lvGhS~Gg~ia~~~A~~~p~--~v~~lvl~~~ 137 (328)
T 2cjp_A 83 FSILHLVGDVVALLEAIAP--NEEKVFVVAHDWGALIAWHLCLFRPD--KVKALVNLSV 137 (328)
T ss_dssp GSHHHHHHHHHHHHHHHCT--TCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESC
T ss_pred ccHHHHHHHHHHHHHHhcC--CCCCeEEEEECHHHHHHHHHHHhChh--heeEEEEEcc
Confidence 334567888888777641 14589999999999999999999999 7999999874
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.4e-15 Score=166.84 Aligned_cols=167 Identities=17% Similarity=0.044 Sum_probs=127.6
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
..+.+.+.+.+| ++.++++.|++. .++.|+||++||++...+. ......|+++||.|+++|+||+|.|.+.
T Consensus 67 ~~~~~~~~~~dg~~i~~~~~~P~~~--~~~~p~vv~~HG~g~~~~~------~~~~~~l~~~G~~v~~~d~rG~g~s~~~ 138 (337)
T 1vlq_A 67 EAYDVTFSGYRGQRIKGWLLVPKLE--EEKLPCVVQYIGYNGGRGF------PHDWLFWPSMGYICFVMDTRGQGSGWLK 138 (337)
T ss_dssp EEEEEEEECGGGCEEEEEEEEECCS--CSSEEEEEECCCTTCCCCC------GGGGCHHHHTTCEEEEECCTTCCCSSSC
T ss_pred EEEEEEEEcCCCCEEEEEEEecCCC--CCCccEEEEEcCCCCCCCC------chhhcchhhCCCEEEEecCCCCCCcccC
Confidence 456788888777 799999998752 2467999999998643222 2234467788999999999999976532
Q ss_pred --CCC-------------------------ccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCC
Q psy15208 83 --YDS-------------------------GNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEIS 133 (1027)
Q Consensus 83 --~~~-------------------------~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~ 133 (1027)
... ......|+.++++++..... ..+++++||||||.+++.++..+|.
T Consensus 139 ~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~--- 215 (337)
T 1vlq_A 139 GDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKK--- 215 (337)
T ss_dssp CCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCSS---
T ss_pred CCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCCC---
Confidence 000 01468899999999987642 2479999999999999999999874
Q ss_pred ccEEEEEccCCCcC----------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHH
Q psy15208 134 IKILILISVAVKKW----------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVF 173 (1027)
Q Consensus 134 V~gLVli~p~~~~~----------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~ 173 (1027)
++++|+.+|....+ .+..+++|+|++||+.|.++|++.+.
T Consensus 216 v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~ 295 (337)
T 1vlq_A 216 AKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVF 295 (337)
T ss_dssp CCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHH
T ss_pred ccEEEECCCcccCHHHHHhcCCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHHcCCCEEEEeeCCCCCCCchhHH
Confidence 89999998853310 13567899999999999999999998
Q ss_pred hhhCCCCC
Q psy15208 174 LWANPLDI 181 (1027)
Q Consensus 174 ~l~~~~~~ 181 (1027)
.+++.+..
T Consensus 296 ~~~~~l~~ 303 (337)
T 1vlq_A 296 AAYNYYAG 303 (337)
T ss_dssp HHHHHCCS
T ss_pred HHHHhcCC
Confidence 88776653
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.8e-16 Score=177.49 Aligned_cols=128 Identities=13% Similarity=0.048 Sum_probs=92.2
Q ss_pred EecCCc-eEEEEEEecCCc---cccCCccEEEEECCCCCCCCCCChHHHHHHHHHHH----hCCc---EEEEEcCCCCCC
Q psy15208 10 INGSVG-ILHCAINFPSSI---KLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVML----SLGY---ISIRMNFRGVGA 78 (1027)
Q Consensus 10 I~t~dG-~I~~~l~~P~~~---~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La----~~Gy---~Vla~DlrGhG~ 78 (1027)
+.+.+| ++++..+.|.+. ...+++|+|||+||++. +.. .|..+++.|+ +.|| +|+++|+||||.
T Consensus 25 ~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~---~~~--~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~ 99 (398)
T 2y6u_A 25 LCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGM---SKV--VWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGD 99 (398)
T ss_dssp SSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTC---CGG--GGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHH
T ss_pred ccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCC---cHH--HHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCC
Confidence 345566 788888887540 01134689999999853 322 4677888888 3489 999999999999
Q ss_pred CCCC-------CCCccchHHHHHHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 79 SSGT-------YDSGNGETDDMEILLRYIQKKYPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 79 S~g~-------~~~~~~~~~Dv~avl~~L~~~~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
|... ..++...+.|+.++++.+....+.. +++|+||||||.+++.+|.++|+ +++++|+++|..
T Consensus 100 S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~ 172 (398)
T 2y6u_A 100 SAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPN--LFHLLILIEPVV 172 (398)
T ss_dssp HHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTT--SCSEEEEESCCC
T ss_pred CCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCch--heeEEEEecccc
Confidence 8742 1233455666666666543211223 49999999999999999999998 799999998743
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.2e-15 Score=165.24 Aligned_cols=100 Identities=12% Similarity=0.087 Sum_probs=78.2
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---CCccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY---DSGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~---~~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
.|+|||+||++. +. ..|..+++.|+++||+|+++|+||||.|+... .+...+++|+.++++.+. ...++
T Consensus 4 ~~~vvllHG~~~---~~--~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~ 75 (273)
T 1xkl_A 4 GKHFVLVHGACH---GG--WSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLS---ADEKV 75 (273)
T ss_dssp CCEEEEECCTTC---CG--GGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSC---SSSCE
T ss_pred CCeEEEECCCCC---Cc--chHHHHHHHHHhCCCEEEEecCCCCCCCccCcccccCHHHHHHHHHHHHHHhc---cCCCE
Confidence 467899999842 22 24778999998889999999999999997532 234455666655555431 23589
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+|+||||||.+++.+|.++|+ +++++|++++
T Consensus 76 ~lvGhSmGG~va~~~a~~~P~--~v~~lvl~~~ 106 (273)
T 1xkl_A 76 ILVGHSLGGMNLGLAMEKYPQ--KIYAAVFLAA 106 (273)
T ss_dssp EEEEETTHHHHHHHHHHHCGG--GEEEEEEESC
T ss_pred EEEecCHHHHHHHHHHHhChH--hheEEEEEec
Confidence 999999999999999999999 7999999875
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.64 E-value=3.1e-15 Score=170.30 Aligned_cols=163 Identities=14% Similarity=0.087 Sum_probs=125.8
Q ss_pred ceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
..+.+.++..+.++.++++.|++ .++.|+||++||++ ++... +..++..|+++||.|+++|+||+|.|....
T Consensus 126 ~~~~v~~~~dg~~i~~~l~~p~~---~~~~P~vl~~hG~~---~~~~~--~~~~~~~l~~~G~~v~~~d~rG~G~s~~~~ 197 (386)
T 2jbw_A 126 PAERHELVVDGIPMPVYVRIPEG---PGPHPAVIMLGGLE---STKEE--SFQMENLVLDRGMATATFDGPGQGEMFEYK 197 (386)
T ss_dssp CEEEEEEEETTEEEEEEEECCSS---SCCEEEEEEECCSS---CCTTT--THHHHHHHHHTTCEEEEECCTTSGGGTTTC
T ss_pred CeEEEEEEeCCEEEEEEEEcCCC---CCCCCEEEEeCCCC---ccHHH--HHHHHHHHHhCCCEEEEECCCCCCCCCCCC
Confidence 45677888854589999999986 25689999999974 33332 334488888999999999999999984332
Q ss_pred CCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC--------------
Q psy15208 84 DSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW-------------- 147 (1027)
Q Consensus 84 ~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~-------------- 147 (1027)
........++..+++++.... +..+++|+|||+||.+++.++.+ |+ +++++|++ |.....
T Consensus 198 ~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~--~~~a~v~~-~~~~~~~~~~~~~~~~~~~~ 273 (386)
T 2jbw_A 198 RIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EP--RLAACISW-GGFSDLDYWDLETPLTKESW 273 (386)
T ss_dssp CSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CT--TCCEEEEE-SCCSCSTTGGGSCHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-Cc--ceeEEEEe-ccCChHHHHHhccHHHHHHH
Confidence 333456677888888888752 33479999999999999999999 76 79999999 653210
Q ss_pred ------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 148 ------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 148 ------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
.+.++++|+|++||++|. +|++.+..+.+.+
T Consensus 274 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l 328 (386)
T 2jbw_A 274 KYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELV 328 (386)
T ss_dssp HHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHS
T ss_pred HHHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHh
Confidence 144568999999999999 9999988887766
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.64 E-value=3.4e-15 Score=162.99 Aligned_cols=142 Identities=15% Similarity=0.270 Sum_probs=104.8
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---CccchHHHHHHHHHHHHHhCCC-Cc
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD---SGNGETDDMEILLRYIQKKYPY-LP 108 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~---~~~~~~~Dv~avl~~L~~~~~~-~p 108 (1027)
.|+|||+||++..++ ....|..+++.|++ +|+|+++|+||||.|. ... +...+++|+.++++.+ .. .+
T Consensus 36 g~~vvllHG~~~~~~--~~~~~~~~~~~L~~-~~~vi~~Dl~G~G~S~-~~~~~~~~~~~~~dl~~~l~~l----~~~~~ 107 (296)
T 1j1i_A 36 GQPVILIHGGGAGAE--SEGNWRNVIPILAR-HYRVIAMDMLGFGKTA-KPDIEYTQDRRIRHLHDFIKAM----NFDGK 107 (296)
T ss_dssp SSEEEEECCCSTTCC--HHHHHTTTHHHHTT-TSEEEEECCTTSTTSC-CCSSCCCHHHHHHHHHHHHHHS----CCSSC
T ss_pred CCeEEEECCCCCCcc--hHHHHHHHHHHHhh-cCEEEEECCCCCCCCC-CCCCCCCHHHHHHHHHHHHHhc----CCCCC
Confidence 357899999742112 22357778888876 4999999999999998 322 3344566665555543 33 58
Q ss_pred EEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc------------------------------------------
Q psy15208 109 IILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK------------------------------------------ 146 (1027)
Q Consensus 109 viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~------------------------------------------ 146 (1027)
++|+||||||.+++.+|.++|+ +++++|++++....
T Consensus 108 ~~lvGhS~Gg~ia~~~A~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (296)
T 1j1i_A 108 VSIVGNSMGGATGLGVSVLHSE--LVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVHLVKALTNDGFKIDDAMINSR 185 (296)
T ss_dssp EEEEEEHHHHHHHHHHHHHCGG--GEEEEEEESCCBCCCC----------CCSCHHHHHHHHHHHSCTTCCCCHHHHHHH
T ss_pred eEEEEEChhHHHHHHHHHhChH--hhhEEEEECCCCCCCCCCchHHHHhcccCCchHHHHHHHHhccCcccccHHHHHHH
Confidence 9999999999999999999998 79999999864210
Q ss_pred --------------------------C----CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceE
Q psy15208 147 --------------------------W----LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVV 184 (1027)
Q Consensus 147 --------------------------~----~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L 184 (1027)
+ .+..+++|+|+++|++|.++|++.+..+.+.+....+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~~~~~ 253 (296)
T 1j1i_A 186 YTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWG 253 (296)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTEEE
T ss_pred HHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHHHHHHHHHCCCCEE
Confidence 0 0235689999999999999999998887776554433
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.3e-15 Score=166.37 Aligned_cols=119 Identities=12% Similarity=0.053 Sum_probs=85.9
Q ss_pred EecCC-ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---C
Q psy15208 10 INGSV-GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD---S 85 (1027)
Q Consensus 10 I~t~d-G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~---~ 85 (1027)
+...+ .++++..+.+ + ++|+|||+||++..+++ ...|..+++.|++ .|+|+++|+||||.|+.... +
T Consensus 18 ~~~~g~~~l~y~~~G~-g-----~~~~vvllHG~~pg~~~--~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~ 88 (291)
T 2wue_A 18 VDVDGPLKLHYHEAGV-G-----NDQTVVLLHGGGPGAAS--WTNFSRNIAVLAR-HFHVLAVDQPGYGHSDKRAEHGQF 88 (291)
T ss_dssp EESSSEEEEEEEEECT-T-----CSSEEEEECCCCTTCCH--HHHTTTTHHHHTT-TSEEEEECCTTSTTSCCCSCCSSH
T ss_pred EEeCCcEEEEEEecCC-C-----CCCcEEEECCCCCccch--HHHHHHHHHHHHh-cCEEEEECCCCCCCCCCCCCCCcC
Confidence 44444 4666655432 2 34689999997310121 2346677888876 49999999999999986432 2
Q ss_pred ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 86 GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 86 ~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
...+++|+.++++.+. ..+++|+||||||.+++.+|.++|+ +++++|++++.
T Consensus 89 ~~~~a~dl~~~l~~l~----~~~~~lvGhS~Gg~ia~~~A~~~p~--~v~~lvl~~~~ 140 (291)
T 2wue_A 89 NRYAAMALKGLFDQLG----LGRVPLVGNALGGGTAVRFALDYPA--RAGRLVLMGPG 140 (291)
T ss_dssp HHHHHHHHHHHHHHHT----CCSEEEEEETHHHHHHHHHHHHSTT--TEEEEEEESCS
T ss_pred HHHHHHHHHHHHHHhC----CCCeEEEEEChhHHHHHHHHHhChH--hhcEEEEECCC
Confidence 3456677666666553 3489999999999999999999999 89999999864
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=2.2e-15 Score=169.05 Aligned_cols=120 Identities=18% Similarity=0.166 Sum_probs=91.2
Q ss_pred EecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC----C
Q psy15208 10 INGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD----S 85 (1027)
Q Consensus 10 I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~----~ 85 (1027)
+...+.++++..+.|++ ...|+|||+||++ ++.. .|..+++.|+++||+|+++|+||||.|..... +
T Consensus 8 ~~~~g~~l~y~~~G~~~----~~~~~vv~~hG~~---~~~~--~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~~~~~ 78 (356)
T 2e3j_A 8 LNCRGTRIHAVADSPPD----QQGPLVVLLHGFP---ESWY--SWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYR 78 (356)
T ss_dssp EEETTEEEEEEEECCTT----CCSCEEEEECCTT---CCGG--GGTTTHHHHHHTTCEEEEECCTTSTTSCCCCSGGGGS
T ss_pred EccCCeEEEEEEecCCC----CCCCEEEEECCCC---CcHH--HHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCcccccC
Confidence 44444588888777653 2467899999974 3322 46778899998899999999999999986432 2
Q ss_pred ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 86 GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 86 ~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
...++.|+.++++.+ +..+++|+||||||.+++.++.++|+ +++++|+++++.
T Consensus 79 ~~~~~~~~~~~~~~l----~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~ 131 (356)
T 2e3j_A 79 IKELVGDVVGVLDSY----GAEQAFVVGHDWGAPVAWTFAWLHPD--RCAGVVGISVPF 131 (356)
T ss_dssp HHHHHHHHHHHHHHT----TCSCEEEEEETTHHHHHHHHHHHCGG--GEEEEEEESSCC
T ss_pred HHHHHHHHHHHHHHc----CCCCeEEEEECHhHHHHHHHHHhCcH--hhcEEEEECCcc
Confidence 334566666666554 44589999999999999999999998 799999998643
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.2e-15 Score=168.79 Aligned_cols=115 Identities=13% Similarity=0.078 Sum_probs=86.6
Q ss_pred EecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCcc
Q psy15208 10 INGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGN 87 (1027)
Q Consensus 10 I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~ 87 (1027)
+...+.++++..+.+ + ++|+|||+||++. +. ..|..+++.|++ +|+|+++|+||||.|+... .+..
T Consensus 12 ~~~~g~~l~y~~~G~-g-----~~~pvvllHG~~~---~~--~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~ 79 (316)
T 3afi_E 12 APVLGSSMAYRETGA-Q-----DAPVVLFLHGNPT---SS--HIWRNILPLVSP-VAHCIAPDLIGFGQSGKPDIAYRFF 79 (316)
T ss_dssp EEETTEEEEEEEESC-T-----TSCEEEEECCTTC---CG--GGGTTTHHHHTT-TSEEEEECCTTSTTSCCCSSCCCHH
T ss_pred EEeCCEEEEEEEeCC-C-----CCCeEEEECCCCC---ch--HHHHHHHHHHhh-CCEEEEECCCCCCCCCCCCCCCCHH
Confidence 444444777665533 2 2357999999853 32 247778888976 5999999999999997532 2345
Q ss_pred chHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 88 GETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
.+++|+.++++.+ +..+++|+||||||.+|+.+|.++|+ +++++|++++
T Consensus 80 ~~a~dl~~ll~~l----~~~~~~lvGhS~Gg~va~~~A~~~P~--~v~~lvl~~~ 128 (316)
T 3afi_E 80 DHVRYLDAFIEQR----GVTSAYLVAQDWGTALAFHLAARRPD--FVRGLAFMEF 128 (316)
T ss_dssp HHHHHHHHHHHHT----TCCSEEEEEEEHHHHHHHHHHHHCTT--TEEEEEEEEE
T ss_pred HHHHHHHHHHHHc----CCCCEEEEEeCccHHHHHHHHHHCHH--hhhheeeecc
Confidence 6677777777654 34589999999999999999999999 8999999875
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.6e-15 Score=165.30 Aligned_cols=154 Identities=17% Similarity=0.166 Sum_probs=115.7
Q ss_pred EEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCc
Q psy15208 9 NINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSG 86 (1027)
Q Consensus 9 ~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~ 86 (1027)
.+...+.++++..+.+ .|+|||+||++ ++.. .|..+++.|++ +|.|+++|+||||.|.... .+.
T Consensus 52 ~~~~~~~~~~~~~~g~--------~p~vv~lhG~~---~~~~--~~~~~~~~L~~-~~~v~~~D~~G~G~S~~~~~~~~~ 117 (314)
T 3kxp_A 52 RVDIGRITLNVREKGS--------GPLMLFFHGIT---SNSA--VFEPLMIRLSD-RFTTIAVDQRGHGLSDKPETGYEA 117 (314)
T ss_dssp EEECSSCEEEEEEECC--------SSEEEEECCTT---CCGG--GGHHHHHTTTT-TSEEEEECCTTSTTSCCCSSCCSH
T ss_pred eEEECCEEEEEEecCC--------CCEEEEECCCC---CCHH--HHHHHHHHHHc-CCeEEEEeCCCcCCCCCCCCCCCH
Confidence 3444444666554422 57899999974 3332 47788999987 7999999999999997432 234
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-------------------
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------------------- 147 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------------------- 147 (1027)
...++|+.++++++. ..+++|+||||||.+++.+|.++|+ +++++|++++.+...
T Consensus 118 ~~~~~dl~~~l~~l~----~~~v~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (314)
T 3kxp_A 118 NDYADDIAGLIRTLA----RGHAILVGHSLGARNSVTAAAKYPD--LVRSVVAIDFTPYIETEALDALEARVNAGSQLFE 191 (314)
T ss_dssp HHHHHHHHHHHHHHT----SSCEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBS
T ss_pred HHHHHHHHHHHHHhC----CCCcEEEEECchHHHHHHHHHhChh--heeEEEEeCCCCCCCcchhhHHHHHhhhchhhhc
Confidence 556777777776664 3489999999999999999999998 799999998753210
Q ss_pred ----------------------------------------------------------CCCCCCCcEEEEEeCCCCCCCh
Q psy15208 148 ----------------------------------------------------------LIPEVPKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 148 ----------------------------------------------------------~l~~i~~PvLiIhG~~D~iVP~ 169 (1027)
.+..+++|+|+++|++|.++|+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~~ 271 (314)
T 3kxp_A 192 DIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSA 271 (314)
T ss_dssp SHHHHHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEEEETTCSSSCH
T ss_pred CHHHHHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEEecCCCccCCH
Confidence 0124789999999999999999
Q ss_pred HHHHhhhCCCCCc
Q psy15208 170 KDVFLWANPLDIP 182 (1027)
Q Consensus 170 ~~~~~l~~~~~~~ 182 (1027)
+.+..+.+.++..
T Consensus 272 ~~~~~~~~~~~~~ 284 (314)
T 3kxp_A 272 AALAKTSRLRPDL 284 (314)
T ss_dssp HHHHHHHHHCTTS
T ss_pred HHHHHHHHhCCCc
Confidence 9988887765433
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.64 E-value=9.1e-16 Score=164.43 Aligned_cols=140 Identities=17% Similarity=0.161 Sum_probs=109.7
Q ss_pred CccEEEEECCCCCCCCCCChHHHH-HHHHHHHhCCcEEEEEcCCCCCCCCCCC-CCccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQ-TLVRVMLSLGYISIRMNFRGVGASSGTY-DSGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~-~la~~La~~Gy~Vla~DlrGhG~S~g~~-~~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
..|+|||+||++. +.. .|. .++..|+++||+|+++|+||||.|.... .+....++|+.++++.+ +..++
T Consensus 42 ~~~~vv~lHG~~~---~~~--~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~l~~l----~~~~~ 112 (293)
T 3hss_A 42 TGDPVVFIAGRGG---AGR--TWHPHQVPAFLAAGYRCITFDNRGIGATENAEGFTTQTMVADTAALIETL----DIAPA 112 (293)
T ss_dssp SSEEEEEECCTTC---CGG--GGTTTTHHHHHHTTEEEEEECCTTSGGGTTCCSCCHHHHHHHHHHHHHHH----TCCSE
T ss_pred CCCEEEEECCCCC---chh--hcchhhhhhHhhcCCeEEEEccCCCCCCCCcccCCHHHHHHHHHHHHHhc----CCCcE
Confidence 3578999999743 322 355 5788888889999999999999987542 24456677777777766 33489
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC------------------------------------------
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------------------------------------------ 147 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------------------------------------------ 147 (1027)
+|+||||||.+++.+|.++|+ +++++|+++|.....
T Consensus 113 ~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (293)
T 3hss_A 113 RVVGVSMGAFIAQELMVVAPE--LVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTLNDD 190 (293)
T ss_dssp EEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHHHHTCH
T ss_pred EEEeeCccHHHHHHHHHHChH--HHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhhhccccccccc
Confidence 999999999999999999998 799999999863210
Q ss_pred -----------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 148 -----------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 148 -----------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
.+..+++|+++++|++|.++|++....+.+.++..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~ 260 (293)
T 3hss_A 191 VAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPNG 260 (293)
T ss_dssp HHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHSTTE
T ss_pred ccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCc
Confidence 02567899999999999999999988777765443
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.3e-15 Score=160.71 Aligned_cols=142 Identities=15% Similarity=0.196 Sum_probs=101.7
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHH-HHHHhCCcEEEEEcCCCCCCCCCCCC---CccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLV-RVMLSLGYISIRMNFRGVGASSGTYD---SGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la-~~La~~Gy~Vla~DlrGhG~S~g~~~---~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
++|||+||++...++ ...|..++ +.|++ +|+|+++|+||||.|..... +....++|+.++++. .+..++
T Consensus 37 ~~vvllHG~~~~~~~--~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~----l~~~~~ 109 (289)
T 1u2e_A 37 ETVVLLHGSGPGATG--WANFSRNIDPLVEA-GYRVILLDCPGWGKSDSVVNSGSRSDLNARILKSVVDQ----LDIAKI 109 (289)
T ss_dssp SEEEEECCCSTTCCH--HHHTTTTHHHHHHT-TCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHH----TTCCCE
T ss_pred ceEEEECCCCcccch--hHHHHHhhhHHHhc-CCeEEEEcCCCCCCCCCCCccccCHHHHHHHHHHHHHH----hCCCce
Confidence 378999997421122 12455566 77876 59999999999999986432 123344555544443 345589
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC--------c--------------------------------C--
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK--------K--------------------------------W-- 147 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~--------~--------------------------------~-- 147 (1027)
+|+||||||.+++.+|.++|+ +++++|++++... . .
T Consensus 110 ~lvGhS~GG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (289)
T 1u2e_A 110 HLLGNSMGGHSSVAFTLKWPE--RVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTD 187 (289)
T ss_dssp EEEEETHHHHHHHHHHHHCGG--GEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCCH
T ss_pred EEEEECHhHHHHHHHHHHCHH--hhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCCH
Confidence 999999999999999999998 7999999876321 0 0
Q ss_pred ------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceE
Q psy15208 148 ------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVV 184 (1027)
Q Consensus 148 ------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L 184 (1027)
.+..+++|+|++||++|.++|++.+..+.+.+....+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~ 260 (289)
T 1u2e_A 188 ALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGSEL 260 (289)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSTTCEE
T ss_pred HHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhCCCcEE
Confidence 0224579999999999999999998877765543333
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.64 E-value=4.7e-15 Score=161.54 Aligned_cols=118 Identities=16% Similarity=0.087 Sum_probs=83.3
Q ss_pred EEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--
Q psy15208 7 FFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY-- 83 (1027)
Q Consensus 7 ~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~-- 83 (1027)
...+...+| ++++..+.+++ .++|||+||++..+ .. ..+...|...+|+|+++|+||||.|....
T Consensus 13 ~~~~~~~~g~~l~y~~~G~~~------g~pvvllHG~~~~~-~~-----~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~ 80 (313)
T 1azw_A 13 QGSLKVDDRHTLYFEQCGNPH------GKPVVMLHGGPGGG-CN-----DKMRRFHDPAKYRIVLFDQRGSGRSTPHADL 80 (313)
T ss_dssp EEEEECSSSCEEEEEEEECTT------SEEEEEECSTTTTC-CC-----GGGGGGSCTTTEEEEEECCTTSTTSBSTTCC
T ss_pred cceEEcCCCCEEEEEecCCCC------CCeEEEECCCCCcc-cc-----HHHHHhcCcCcceEEEECCCCCcCCCCCccc
Confidence 345666666 67766655432 35689999975321 11 11233344579999999999999997532
Q ss_pred --CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 84 --DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 84 --~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
.+...+++|+.++++.+ +..+++|+||||||.+++.+|.++|+ +++++|++++
T Consensus 81 ~~~~~~~~~~dl~~l~~~l----~~~~~~lvGhSmGg~ia~~~a~~~p~--~v~~lvl~~~ 135 (313)
T 1azw_A 81 VDNTTWDLVADIERLRTHL----GVDRWQVFGGSWGSTLALAYAQTHPQ--QVTELVLRGI 135 (313)
T ss_dssp TTCCHHHHHHHHHHHHHHT----TCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESC
T ss_pred ccccHHHHHHHHHHHHHHh----CCCceEEEEECHHHHHHHHHHHhChh--heeEEEEecc
Confidence 12345566666666544 45589999999999999999999998 7999999874
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.64 E-value=7.7e-15 Score=163.53 Aligned_cols=131 Identities=12% Similarity=0.125 Sum_probs=103.7
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHH-HHHHHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQ-TLVRVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~-~la~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
..+.+.+.+.+| ++.+.++.|++. ..++.|+||++||++. +... |. .+++.|+++||.|+++|+||||.|.+
T Consensus 67 ~~~~~~~~~~~g~~~~~~~~~p~~~-~~~~~p~vv~~hG~~~---~~~~--~~~~~~~~l~~~G~~v~~~d~~g~g~s~~ 140 (367)
T 2hdw_A 67 EHRKVTFANRYGITLAADLYLPKNR-GGDRLPAIVIGGPFGA---VKEQ--SSGLYAQTMAERGFVTLAFDPSYTGESGG 140 (367)
T ss_dssp EEEEEEEECTTSCEEEEEEEEESSC-CSSCEEEEEEECCTTC---CTTS--HHHHHHHHHHHTTCEEEEECCTTSTTSCC
T ss_pred eeEEEEEecCCCCEEEEEEEeCCCC-CCCCCCEEEEECCCCC---cchh--hHHHHHHHHHHCCCEEEEECCCCcCCCCC
Confidence 456778888877 788988988751 1246789999999743 3322 43 48899999999999999999999986
Q ss_pred CCCC---ccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 82 TYDS---GNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 82 ~~~~---~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
.... ......|+.++++++..... ..+++++||||||.+++.++.++|+ ++++|+++|.
T Consensus 141 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~~~~v~~~p~ 204 (367)
T 2hdw_A 141 QPRNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDKR---VKAVVTSTMY 204 (367)
T ss_dssp SSSSCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTT---CCEEEEESCC
T ss_pred cCccccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCCC---ccEEEEeccc
Confidence 5432 34578999999999987642 3479999999999999999999874 8999999853
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.64 E-value=3.4e-15 Score=162.78 Aligned_cols=113 Identities=17% Similarity=0.159 Sum_probs=85.6
Q ss_pred EecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC------
Q psy15208 10 INGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY------ 83 (1027)
Q Consensus 10 I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~------ 83 (1027)
+...+.++++..+. . .|+|||+||++. +. ..|..+++.|+++ |+|+++|+||||.|+...
T Consensus 14 ~~~~g~~l~y~~~G-~-------g~~lvllHG~~~---~~--~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~~~~~~~ 79 (294)
T 1ehy_A 14 VQLPDVKIHYVREG-A-------GPTLLLLHGWPG---FW--WEWSKVIGPLAEH-YDVIVPDLRGFGDSEKPDLNDLSK 79 (294)
T ss_dssp EECSSCEEEEEEEE-C-------SSEEEEECCSSC---CG--GGGHHHHHHHHTT-SEEEEECCTTSTTSCCCCTTCGGG
T ss_pred EEECCEEEEEEEcC-C-------CCEEEEECCCCc---ch--hhHHHHHHHHhhc-CEEEecCCCCCCCCCCCccccccC
Confidence 44434477765543 2 357899999843 32 2588899999875 999999999999998641
Q ss_pred CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 84 DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 84 ~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
.+...+++|+.++++.+ +..+++|+||||||.+|+.+|.++|+ +++++|++++
T Consensus 80 ~~~~~~a~dl~~ll~~l----~~~~~~lvGhS~Gg~va~~~A~~~P~--~v~~lvl~~~ 132 (294)
T 1ehy_A 80 YSLDKAADDQAALLDAL----GIEKAYVVGHDFAAIVLHKFIRKYSD--RVIKAAIFDP 132 (294)
T ss_dssp GCHHHHHHHHHHHHHHT----TCCCEEEEEETHHHHHHHHHHHHTGG--GEEEEEEECC
T ss_pred cCHHHHHHHHHHHHHHc----CCCCEEEEEeChhHHHHHHHHHhChh--heeEEEEecC
Confidence 12345666766666654 44589999999999999999999999 7999999985
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=5.1e-15 Score=161.57 Aligned_cols=117 Identities=14% Similarity=0.107 Sum_probs=82.4
Q ss_pred EEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC---
Q psy15208 8 FNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--- 83 (1027)
Q Consensus 8 i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--- 83 (1027)
..+...+| ++++..+.+++ .++|||+||++..+ .. ..+...|...+|+|+++|+||||.|....
T Consensus 17 ~~~~~~~g~~l~~~~~g~~~------g~~vvllHG~~~~~-~~-----~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~ 84 (317)
T 1wm1_A 17 GWLDTGDGHRIYWELSGNPN------GKPAVFIHGGPGGG-IS-----PHHRQLFDPERYKVLLFDQRGCGRSRPHASLD 84 (317)
T ss_dssp EEEECSSSCEEEEEEEECTT------SEEEEEECCTTTCC-CC-----GGGGGGSCTTTEEEEEECCTTSTTCBSTTCCT
T ss_pred eEEEcCCCcEEEEEEcCCCC------CCcEEEECCCCCcc-cc-----hhhhhhccccCCeEEEECCCCCCCCCCCcccc
Confidence 35666666 67766654432 35689999975322 11 11233344579999999999999997532
Q ss_pred -CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 84 -DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 84 -~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
.+...+++|+.++++.+ +..+++|+||||||.+++.+|.++|+ +++++|++++
T Consensus 85 ~~~~~~~~~dl~~l~~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~ 138 (317)
T 1wm1_A 85 NNTTWHLVADIERLREMA----GVEQWLVFGGSWGSTLALAYAQTHPE--RVSEMVLRGI 138 (317)
T ss_dssp TCSHHHHHHHHHHHHHHT----TCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESC
T ss_pred cccHHHHHHHHHHHHHHc----CCCcEEEEEeCHHHHHHHHHHHHCCh--heeeeeEecc
Confidence 12344566666665543 45589999999999999999999998 7999999874
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.5e-15 Score=175.85 Aligned_cols=167 Identities=15% Similarity=0.110 Sum_probs=127.9
Q ss_pred ceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
..+.+.++..++.+.++++.|.+ ..+.|+||++||++ ++.. ..+..+++.|+++||.|+++|+||+|.|.+..
T Consensus 167 ~~~~v~i~~~g~~l~~~~~~P~~---~~~~P~vv~~hG~~---~~~~-~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~ 239 (415)
T 3mve_A 167 IIKQLEIPFEKGKITAHLHLTNT---DKPHPVVIVSAGLD---SLQT-DMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYP 239 (415)
T ss_dssp EEEEEEEECSSSEEEEEEEESCS---SSCEEEEEEECCTT---SCGG-GGHHHHHHTTGGGTCEEEEECCTTSGGGTTSC
T ss_pred CeEEEEEEECCEEEEEEEEecCC---CCCCCEEEEECCCC---ccHH-HHHHHHHHHHHhCCCEEEEECCCCCCCCCCCC
Confidence 45677888877799999999976 35789999999973 3322 24556788898899999999999999998643
Q ss_pred CCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC--------------
Q psy15208 84 DSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW-------------- 147 (1027)
Q Consensus 84 ~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~-------------- 147 (1027)
.. .........+++++.... +..+++|+||||||.+++.++..+|+ +++++|+++|.....
T Consensus 240 ~~-~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~--~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 316 (415)
T 3mve_A 240 LT-EDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQE--KIKACVILGAPIHDIFASPQKLQQMPKMY 316 (415)
T ss_dssp CC-SCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTT--TCCEEEEESCCCSHHHHCHHHHTTSCHHH
T ss_pred CC-CCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCc--ceeEEEEECCccccccccHHHHHHhHHHH
Confidence 21 122333456677776543 23579999999999999999999887 799999999874200
Q ss_pred --------------------------C-------CCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 148 --------------------------L-------IPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 148 --------------------------~-------l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
. ...+.+|+|++||++|.++|++.+..+.+...
T Consensus 317 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~ 382 (415)
T 3mve_A 317 LDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAFFST 382 (415)
T ss_dssp HHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHHTBT
T ss_pred HHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHhCC
Confidence 0 13678999999999999999999887776543
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.63 E-value=3.1e-15 Score=160.63 Aligned_cols=117 Identities=16% Similarity=0.127 Sum_probs=89.2
Q ss_pred EEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CC
Q psy15208 8 FNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DS 85 (1027)
Q Consensus 8 i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~ 85 (1027)
..+...+.++++..+. + .|+|||+||++. +. ..|..+++.|+++ |+|+++|+||||.|.... .+
T Consensus 13 ~~~~~~g~~l~~~~~g--~------~~~vv~lHG~~~---~~--~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~~ 78 (301)
T 3kda_A 13 AYREVDGVKLHYVKGG--Q------GPLVMLVHGFGQ---TW--YEWHQLMPELAKR-FTVIAPDLPGLGQSEPPKTGYS 78 (301)
T ss_dssp EEEEETTEEEEEEEEE--S------SSEEEEECCTTC---CG--GGGTTTHHHHTTT-SEEEEECCTTSTTCCCCSSCSS
T ss_pred EEEeeCCeEEEEEEcC--C------CCEEEEECCCCc---ch--hHHHHHHHHHHhc-CeEEEEcCCCCCCCCCCCCCcc
Confidence 3455544577776654 2 468999999843 32 2477889999887 999999999999998642 23
Q ss_pred ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 86 GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 86 ~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
...+++|+.++++.+.. ..|++|+||||||.+++.+|.++|+ +++++|++++.
T Consensus 79 ~~~~~~~l~~~l~~l~~---~~p~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 131 (301)
T 3kda_A 79 GEQVAVYLHKLARQFSP---DRPFDLVAHDIGIWNTYPMVVKNQA--DIARLVYMEAP 131 (301)
T ss_dssp HHHHHHHHHHHHHHHCS---SSCEEEEEETHHHHTTHHHHHHCGG--GEEEEEEESSC
T ss_pred HHHHHHHHHHHHHHcCC---CccEEEEEeCccHHHHHHHHHhChh--hccEEEEEccC
Confidence 45667777777766532 2249999999999999999999998 79999999974
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.63 E-value=5.3e-16 Score=160.53 Aligned_cols=151 Identities=15% Similarity=0.192 Sum_probs=110.9
Q ss_pred ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-CccchHHHH
Q psy15208 15 GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD-SGNGETDDM 93 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~-~~~~~~~Dv 93 (1027)
.++++..+.+.+ ++|+|||+||++. +.. .|. +...|+ +||+|+++|+||||.|..... +....++|+
T Consensus 3 ~~l~y~~~g~~~-----~~~~vv~~hG~~~---~~~--~~~-~~~~l~-~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~ 70 (245)
T 3e0x_A 3 AMLHYVHVGNKK-----SPNTLLFVHGSGC---NLK--IFG-ELEKYL-EDYNCILLDLKGHGESKGQCPSTVYGYIDNV 70 (245)
T ss_dssp CCCCEEEEECTT-----CSCEEEEECCTTC---CGG--GGT-TGGGGC-TTSEEEEECCTTSTTCCSCCCSSHHHHHHHH
T ss_pred ceeEEEecCCCC-----CCCEEEEEeCCcc---cHH--HHH-HHHHHH-hCCEEEEecCCCCCCCCCCCCcCHHHHHHHH
Confidence 356666655532 4788999999743 332 355 666676 699999999999999984322 344566666
Q ss_pred HHHHHHHH--HhCCCCcEEEEEechhHHHHHHHHHh-cCCcCCccEEEEEccCCCcC-----------------------
Q psy15208 94 EILLRYIQ--KKYPYLPIILAGFSFGTFVQAKLQKR-LDKEISIKILILISVAVKKW----------------------- 147 (1027)
Q Consensus 94 ~avl~~L~--~~~~~~pviLVGhSmGG~vAl~~A~~-~p~~~~V~gLVli~p~~~~~----------------------- 147 (1027)
..++++.. +..+ +++|+||||||.+++.++.+ +|+ ++++|+++|.....
T Consensus 71 ~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~---v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (245)
T 3e0x_A 71 ANFITNSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN---VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLEC 145 (245)
T ss_dssp HHHHHHCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT---EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHH
T ss_pred HHHHHhhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc---ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCccc
Confidence 66662221 2223 89999999999999999999 887 99999999864430
Q ss_pred -------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc
Q psy15208 148 -------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 148 -------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~ 182 (1027)
.+..+++|+++++|++|.++|++....+.+.+...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 217 (245)
T 3e0x_A 146 IGGIDNPLSEKYFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVENS 217 (245)
T ss_dssp HTCSCSHHHHHHHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSSSE
T ss_pred ccccchHHHHHHHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCc
Confidence 13567899999999999999999988887765433
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.63 E-value=4.9e-15 Score=173.47 Aligned_cols=123 Identities=20% Similarity=0.196 Sum_probs=93.1
Q ss_pred CceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 3 SNTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 3 m~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
|+...+.+.+.+| ++++..+. ..|+|||+||++. +.. .|..+++.|+++||+|+++|+||||.|.+
T Consensus 1 Mp~i~~~~~~~dG~~l~y~~~G--------~gp~VV~lHG~~~---~~~--~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~ 67 (456)
T 3vdx_A 1 MPFITVGQENSTSIDLYYEDHG--------TGVPVVLIHGFPL---SGH--SWERQSAALLDAGYRVITYDRRGFGQSSQ 67 (456)
T ss_dssp -CEEEEEEETTEEEEEEEEEES--------SSEEEEEECCTTC---CGG--GGTTHHHHHHHHTEEEEEECCTTSTTSCC
T ss_pred CCeEeecccccCCeEEEEEEeC--------CCCEEEEECCCCC---cHH--HHHHHHHHHHHCCcEEEEECCCCCCCCCC
Confidence 3444555666677 56544332 2478999999853 322 46788999988899999999999999986
Q ss_pred CCC--CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhc-CCcCCccEEEEEccCC
Q psy15208 82 TYD--SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRL-DKEISIKILILISVAV 144 (1027)
Q Consensus 82 ~~~--~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~-p~~~~V~gLVli~p~~ 144 (1027)
... +...+++|+.++++++. ..+++|+||||||.+++.++.++ |+ +++++|++++..
T Consensus 68 ~~~~~s~~~~a~dl~~~l~~l~----~~~v~LvGhS~GG~ia~~~aa~~~p~--~v~~lVli~~~~ 127 (456)
T 3vdx_A 68 PTTGYDYDTFAADLNTVLETLD----LQDAVLVGFSMGTGEVARYVSSYGTA--RIAAVAFLASLE 127 (456)
T ss_dssp CSSCCSHHHHHHHHHHHHHHHT----CCSEEEEEEGGGGHHHHHHHHHHCSS--SEEEEEEESCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHhC----CCCeEEEEECHHHHHHHHHHHhcchh--heeEEEEeCCcc
Confidence 432 44567888888887763 34899999999999999999888 77 799999999754
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.2e-14 Score=159.69 Aligned_cols=132 Identities=19% Similarity=0.183 Sum_probs=104.5
Q ss_pred ceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL-GYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~-Gy~Vla~DlrGhG~S~g~ 82 (1027)
..+.+.+++++|.+.+.+|.|.+ ..+.|+|||+||+++..++.. .|..+++.|+++ ||.|+++|+||+|.+...
T Consensus 47 ~~~~~~i~~~~g~i~~~~~~p~~---~~~~p~vv~~HGgg~~~g~~~--~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~ 121 (311)
T 2c7b_A 47 ETRDVHIPVSGGSIRARVYFPKK---AAGLPAVLYYHGGGFVFGSIE--THDHICRRLSRLSDSVVVSVDYRLAPEYKFP 121 (311)
T ss_dssp EEEEEEEEETTEEEEEEEEESSS---CSSEEEEEEECCSTTTSCCTG--GGHHHHHHHHHHHTCEEEEECCCCTTTSCTT
T ss_pred eEEEEEecCCCCcEEEEEEecCC---CCCCcEEEEECCCcccCCChh--hhHHHHHHHHHhcCCEEEEecCCCCCCCCCC
Confidence 45678889999999999999976 245789999999865445544 477888899876 999999999999987532
Q ss_pred CCCccchHHHHHHHHHHHHHhC---CC--CcEEEEEechhHHHHHHHHHhcCCc--CCccEEEEEccCCC
Q psy15208 83 YDSGNGETDDMEILLRYIQKKY---PY--LPIILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVAVK 145 (1027)
Q Consensus 83 ~~~~~~~~~Dv~avl~~L~~~~---~~--~pviLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~~~ 145 (1027)
....|+.++++++.... +. .+++|+||||||.+++.++.++|+. .+++++|+++|...
T Consensus 122 -----~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 186 (311)
T 2c7b_A 122 -----TAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVN 186 (311)
T ss_dssp -----HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCC
T ss_pred -----ccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccC
Confidence 35788888888887642 22 4799999999999999999887752 24899999998654
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=8.6e-16 Score=165.09 Aligned_cols=136 Identities=15% Similarity=0.133 Sum_probs=103.8
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC------CCccchHHHHHHHHHHHHHhCCC
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY------DSGNGETDDMEILLRYIQKKYPY 106 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~------~~~~~~~~Dv~avl~~L~~~~~~ 106 (1027)
+|+|||+||++. +.. .|..+++.|++ +|+|+++|+||||.|+... .+...+++|+.++++.+ +.
T Consensus 20 ~~~vvllHG~~~---~~~--~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l----~~ 89 (271)
T 1wom_A 20 KASIMFAPGFGC---DQS--VWNAVAPAFEE-DHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEAL----DL 89 (271)
T ss_dssp SSEEEEECCTTC---CGG--GGTTTGGGGTT-TSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHHT----TC
T ss_pred CCcEEEEcCCCC---chh--hHHHHHHHHHh-cCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHHc----CC
Confidence 478999999743 322 46778888876 7999999999999997532 12345666766666554 34
Q ss_pred CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC----c------------------------------------
Q psy15208 107 LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK----K------------------------------------ 146 (1027)
Q Consensus 107 ~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~----~------------------------------------ 146 (1027)
.+++|+||||||.+++.+|.++|+ +++++|++++.+. .
T Consensus 90 ~~~~lvGhS~GG~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (271)
T 1wom_A 90 KETVFVGHSVGALIGMLASIRRPE--LFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLN 167 (271)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHC
T ss_pred CCeEEEEeCHHHHHHHHHHHhCHH--hhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 589999999999999999999998 7999999976310 0
Q ss_pred --C----------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 147 --W----------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 147 --~----------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
. .+..+++|+++++|++|.++|++....+.+.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~ 237 (271)
T 1wom_A 168 QPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLP 237 (271)
T ss_dssp CTTCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHSS
T ss_pred CCCchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHCC
Confidence 0 024678999999999999999998877766544
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-15 Score=163.57 Aligned_cols=98 Identities=20% Similarity=0.201 Sum_probs=77.8
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---CccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD---SGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~---~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
++|||+||++. +.. .|..+++.|++ +|+|+++|+||||.|..... +...+++|+.++++.+ +..+++
T Consensus 17 ~~vvllHG~~~---~~~--~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~l~~l----~~~~~~ 86 (269)
T 2xmz_A 17 QVLVFLHGFLS---DSR--TYHNHIEKFTD-NYHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDKY----KDKSIT 86 (269)
T ss_dssp EEEEEECCTTC---CGG--GGTTTHHHHHT-TSEEEEECCTTSTTCCCCTTSCCCHHHHHHHHHHHHGGG----TTSEEE
T ss_pred CeEEEEcCCCC---cHH--HHHHHHHHHhh-cCeEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHc----CCCcEE
Confidence 46899999853 322 46778888977 59999999999999986422 4455677766666654 345899
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
|+||||||.+|+.+|.++|+ +++++|++++.
T Consensus 87 lvGhS~Gg~va~~~a~~~p~--~v~~lvl~~~~ 117 (269)
T 2xmz_A 87 LFGYSMGGRVALYYAINGHI--PISNLILESTS 117 (269)
T ss_dssp EEEETHHHHHHHHHHHHCSS--CCSEEEEESCC
T ss_pred EEEECchHHHHHHHHHhCch--heeeeEEEcCC
Confidence 99999999999999999998 79999999853
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.62 E-value=2.3e-15 Score=161.70 Aligned_cols=115 Identities=11% Similarity=0.087 Sum_probs=85.0
Q ss_pred EecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC------
Q psy15208 10 INGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY------ 83 (1027)
Q Consensus 10 I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~------ 83 (1027)
+...+.++++..+.+ .|+|||+||++. +.. .|..+++.|++ +|+|+++|+||||.|....
T Consensus 14 ~~~~g~~l~~~~~g~--------~~~vv~lHG~~~---~~~--~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~~~~~ 79 (302)
T 1mj5_A 14 IEIKGRRMAYIDEGT--------GDPILFQHGNPT---SSY--LWRNIMPHCAG-LGRLIACDLIGMGDSDKLDPSGPER 79 (302)
T ss_dssp EEETTEEEEEEEESC--------SSEEEEECCTTC---CGG--GGTTTGGGGTT-SSEEEEECCTTSTTSCCCSSCSTTS
T ss_pred EEECCEEEEEEEcCC--------CCEEEEECCCCC---chh--hhHHHHHHhcc-CCeEEEEcCCCCCCCCCCCCCCccc
Confidence 333333666655432 478999999843 322 46678888876 4899999999999998642
Q ss_pred CCccchHHHHHHHHHHHHHhCCC-CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 84 DSGNGETDDMEILLRYIQKKYPY-LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 84 ~~~~~~~~Dv~avl~~L~~~~~~-~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
.+....++|+.++++.+ +. .+++|+||||||.+++.+|.++|+ +++++|+++|..
T Consensus 80 ~~~~~~~~~~~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~ 135 (302)
T 1mj5_A 80 YAYAEHRDYLDALWEAL----DLGDRVVLVVHDWGSALGFDWARRHRE--RVQGIAYMEAIA 135 (302)
T ss_dssp SCHHHHHHHHHHHHHHT----TCTTCEEEEEEHHHHHHHHHHHHHTGG--GEEEEEEEEECC
T ss_pred ccHHHHHHHHHHHHHHh----CCCceEEEEEECCccHHHHHHHHHCHH--HHhheeeecccC
Confidence 13345666666666554 33 589999999999999999999998 799999999754
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.2e-15 Score=170.37 Aligned_cols=147 Identities=15% Similarity=0.165 Sum_probs=106.6
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHH-------HHHHHHHhCCcEEEEEcCCCCCCCCCCCCC---
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQ-------TLVRVMLSLGYISIRMNFRGVGASSGTYDS--- 85 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~-------~la~~La~~Gy~Vla~DlrGhG~S~g~~~~--- 85 (1027)
.+++..+.|.+ .++++|||+||++.++. .|. .+++.|+++||.|+++|+||||+|......
T Consensus 49 ~~~~~~~~p~~----~~~~~vvl~HG~g~~~~-----~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~ 119 (328)
T 1qlw_A 49 QMYVRYQIPQR----AKRYPITLIHGCCLTGM-----TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINA 119 (328)
T ss_dssp CEEEEEEEETT----CCSSCEEEECCTTCCGG-----GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHH
T ss_pred eEEEEEEccCC----CCCccEEEEeCCCCCCC-----ccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCccccc
Confidence 46677777765 24577999999854322 344 488999999999999999999999864210
Q ss_pred ---------------------------------------------ccc------------------hHHHHHHHHHHHHH
Q psy15208 86 ---------------------------------------------GNG------------------ETDDMEILLRYIQK 102 (1027)
Q Consensus 86 ---------------------------------------------~~~------------------~~~Dv~avl~~L~~ 102 (1027)
... ...++.++++.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-- 197 (328)
T 1qlw_A 120 VKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL-- 197 (328)
T ss_dssp HHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH--
T ss_pred ccccccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh--
Confidence 000 233333333322
Q ss_pred hCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC--C-cCCCCCCCCcEEEEEeCCCCCCCh-----HHHHh
Q psy15208 103 KYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV--K-KWLIPEVPKNTIIIHGELDEIIPL-----KDVFL 174 (1027)
Q Consensus 103 ~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~--~-~~~l~~i~~PvLiIhG~~D~iVP~-----~~~~~ 174 (1027)
+ +++|+||||||.+++.++.++|+ +++++|+++|.. + .......++|+|++||++|.++|+ +.+..
T Consensus 198 --~--~~~lvGhS~GG~~a~~~a~~~p~--~v~~~v~~~p~~~~~~~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~ 271 (328)
T 1qlw_A 198 --D--GTVLLSHSQSGIYPFQTAAMNPK--GITAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHA 271 (328)
T ss_dssp --T--SEEEEEEGGGTTHHHHHHHHCCT--TEEEEEEESCSCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHH
T ss_pred --C--CceEEEECcccHHHHHHHHhChh--heeEEEEeCCCCCCCHHHHhhccCCCEEEEeccCCccccchhhHHHHHHH
Confidence 2 79999999999999999999998 799999999753 1 112334569999999999999996 77766
Q ss_pred hhCCC
Q psy15208 175 WANPL 179 (1027)
Q Consensus 175 l~~~~ 179 (1027)
+.+.+
T Consensus 272 ~~~~l 276 (328)
T 1qlw_A 272 FIDAL 276 (328)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.9e-15 Score=155.31 Aligned_cols=129 Identities=12% Similarity=0.099 Sum_probs=91.7
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhC--CcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL--GYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~--Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
.|+|||+|||. ++..+.....+.++|.++ +|+|+++|+||||.+ ...++..+++ ..+.++++
T Consensus 2 mptIl~lHGf~---ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~~---------~~~~l~~~~~----~~~~~~i~ 65 (202)
T 4fle_A 2 MSTLLYIHGFN---SSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYPAE---------AAEMLESIVM----DKAGQSIG 65 (202)
T ss_dssp -CEEEEECCTT---CCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSHHH---------HHHHHHHHHH----HHTTSCEE
T ss_pred CcEEEEeCCCC---CCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCHHH---------HHHHHHHHHH----hcCCCcEE
Confidence 37899999984 343333345567777665 599999999999843 2333333333 33455899
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-------------------------------CCCCCCCCcEEEE
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-------------------------------WLIPEVPKNTIII 159 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-------------------------------~~l~~i~~PvLiI 159 (1027)
|+||||||.+|+.+|.++|. ....++...++... .....+.+|+|++
T Consensus 66 l~G~SmGG~~a~~~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii 143 (202)
T 4fle_A 66 IVGSSLGGYFATWLSQRFSI--PAVVVNPAVRPFELLSDYLGENQNPYTGQKYVLESRHIYDLKAMQIEKLESPDLLWLL 143 (202)
T ss_dssp EEEETHHHHHHHHHHHHTTC--CEEEESCCSSHHHHGGGGCEEEECTTTCCEEEECHHHHHHHHTTCCSSCSCGGGEEEE
T ss_pred EEEEChhhHHHHHHHHHhcc--cchheeeccchHHHHHHhhhhhccccccccccchHHHHHHHHhhhhhhhccCceEEEE
Confidence 99999999999999999987 44555444432110 0255678999999
Q ss_pred EeCCCCCCChHHHHhhhCCC
Q psy15208 160 HGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 160 hG~~D~iVP~~~~~~l~~~~ 179 (1027)
||++|++||++.+.++++..
T Consensus 144 hG~~D~~Vp~~~s~~l~~~~ 163 (202)
T 4fle_A 144 QQTGDEVLDYRQAVAYYTPC 163 (202)
T ss_dssp EETTCSSSCHHHHHHHTTTS
T ss_pred EeCCCCCCCHHHHHHHhhCC
Confidence 99999999999999887653
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.61 E-value=3.7e-15 Score=154.64 Aligned_cols=146 Identities=16% Similarity=0.101 Sum_probs=110.1
Q ss_pred EEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEE-------------------cCCCCCCCCC
Q psy15208 21 INFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRM-------------------NFRGVGASSG 81 (1027)
Q Consensus 21 l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~-------------------DlrGhG~S~g 81 (1027)
++.|+. .+++|+|||+||++ ++ ...|..+++.|+++||.|+++ |++|+ .+..
T Consensus 14 ~~~p~~---~~~~~~vv~lHG~~---~~--~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~ 84 (232)
T 1fj2_A 14 AIVPAA---RKATAAVIFLHGLG---DT--GHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDS 84 (232)
T ss_dssp EEECCS---SCCSEEEEEECCSS---SC--HHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTC
T ss_pred cccCCC---CCCCceEEEEecCC---Cc--cchHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccC-Cccc
Confidence 345654 25689999999974 22 235778888898889999998 66666 2222
Q ss_pred CC--CCccchHHHHHHHHHHHHHhCCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC--------CC
Q psy15208 82 TY--DSGNGETDDMEILLRYIQKKYPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW--------LI 149 (1027)
Q Consensus 82 ~~--~~~~~~~~Dv~avl~~L~~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~--------~l 149 (1027)
.. .+....++|+.++++++.. +.. .+++|+||||||.+++.++.++|+ +++++|+++|..... ..
T Consensus 85 ~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~v~~~i~~~~~~~~~~~~~~~~~~~ 161 (232)
T 1fj2_A 85 QEDESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQ--KLAGVTALSCWLPLRASFPQGPIGG 161 (232)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSS--CCSEEEEESCCCTTGGGSCSSCCCS
T ss_pred ccccHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCC--ceeEEEEeecCCCCCcccccccccc
Confidence 11 1234567777777777765 333 589999999999999999999998 799999999875432 15
Q ss_pred CCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 150 PEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 150 ~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
..+.+|++++||++|.++|++.+..+.+.
T Consensus 162 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~~ 190 (232)
T 1fj2_A 162 ANRDISILQCHGDCDPLVPLMFGSLTVEK 190 (232)
T ss_dssp TTTTCCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred ccCCCCEEEEecCCCccCCHHHHHHHHHH
Confidence 67789999999999999999987765543
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-15 Score=168.33 Aligned_cols=126 Identities=11% Similarity=0.006 Sum_probs=82.9
Q ss_pred EEecCCc-e----EEEEEEecCCccccCCccEEEEECCCCCCCCCCC--------hHHHHHHH---HHHHhCCcEEEEEc
Q psy15208 9 NINGSVG-I----LHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMD--------NKVVQTLV---RVMLSLGYISIRMN 72 (1027)
Q Consensus 9 ~I~t~dG-~----I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~--------~~~~~~la---~~La~~Gy~Vla~D 72 (1027)
.+.+++| . |++..+.+.+ ....|+|||+||++.+..... ..+|..++ +.|.++||+|+++|
T Consensus 16 ~~~~~~g~~l~~~i~y~~~g~~~---~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D 92 (377)
T 3i1i_A 16 EYTFENGRTIPVQMGYETYGTLN---RERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTD 92 (377)
T ss_dssp EEECTTSCEEEEEEEEEEESCCC---TTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEEC
T ss_pred ceeecCCCEeeeeEEEEeecccC---CCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEec
Confidence 4666766 3 3444454433 134689999999865432200 01244555 56777899999999
Q ss_pred CCCCCCCCC-------C----C------------CCccchHHHHHHHHHHHHHhCCCCcEE-EEEechhHHHHHHHHHhc
Q psy15208 73 FRGVGASSG-------T----Y------------DSGNGETDDMEILLRYIQKKYPYLPII-LAGFSFGTFVQAKLQKRL 128 (1027)
Q Consensus 73 lrGhG~S~g-------~----~------------~~~~~~~~Dv~avl~~L~~~~~~~pvi-LVGhSmGG~vAl~~A~~~ 128 (1027)
+||||.|.+ . + .+...+++|+.++++ ..+..+++ |+||||||.+++.+|.++
T Consensus 93 ~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~----~l~~~~~~ilvGhS~Gg~ia~~~a~~~ 168 (377)
T 3i1i_A 93 NLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIK----DMGIARLHAVMGPSAGGMIAQQWAVHY 168 (377)
T ss_dssp CTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHH----HTTCCCBSEEEEETHHHHHHHHHHHHC
T ss_pred ccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHH----HcCCCcEeeEEeeCHhHHHHHHHHHHC
Confidence 999987542 0 0 022334555555544 34445675 999999999999999999
Q ss_pred CCcCCccEEEE-EccC
Q psy15208 129 DKEISIKILIL-ISVA 143 (1027)
Q Consensus 129 p~~~~V~gLVl-i~p~ 143 (1027)
|+ +++++|+ +++.
T Consensus 169 p~--~v~~lvl~~~~~ 182 (377)
T 3i1i_A 169 PH--MVERMIGVITNP 182 (377)
T ss_dssp TT--TBSEEEEESCCS
T ss_pred hH--HHHHhcccCcCC
Confidence 99 8999999 5543
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=4.1e-15 Score=152.74 Aligned_cols=141 Identities=12% Similarity=0.045 Sum_probs=104.6
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHh--CCcEEEEEcCC-------------------CCCCCCCCC-CCccc
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS--LGYISIRMNFR-------------------GVGASSGTY-DSGNG 88 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~--~Gy~Vla~Dlr-------------------GhG~S~g~~-~~~~~ 88 (1027)
+++|+|||+||++. +.. .|..+++.|++ +||.|+++|+| |+|.+.... .....
T Consensus 12 ~~~~~vv~~HG~~~---~~~--~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~ 86 (218)
T 1auo_A 12 PADACVIWLHGLGA---DRY--DFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEV 86 (218)
T ss_dssp CCSEEEEEECCTTC---CTT--TTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHH
T ss_pred CCCcEEEEEecCCC---Chh--hHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccchHHHHH
Confidence 56899999999853 332 36788999988 89999998776 344332111 11234
Q ss_pred hHHHHHHHHHHHHHh-CCCCcEEEEEechhHHHHHHHHH-hcCCcCCccEEEEEccCCCcCC------CCCCCCcEEEEE
Q psy15208 89 ETDDMEILLRYIQKK-YPYLPIILAGFSFGTFVQAKLQK-RLDKEISIKILILISVAVKKWL------IPEVPKNTIIIH 160 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~-~~~~pviLVGhSmGG~vAl~~A~-~~p~~~~V~gLVli~p~~~~~~------l~~i~~PvLiIh 160 (1027)
..+|+..+++++... .+..+++++||||||.+++.++. ++|+ +++++|+++|...... ...+.+|++++|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 164 (218)
T 1auo_A 87 SAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQG--PLGGVIALSTYAPTFGDELELSASQQRIPALCLH 164 (218)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCS--CCCEEEEESCCCTTCCTTCCCCHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCC--CccEEEEECCCCCCchhhhhhhhcccCCCEEEEE
Confidence 566777777777542 23347999999999999999999 9988 7999999998765311 124578999999
Q ss_pred eCCCCCCChHHHHhhhCC
Q psy15208 161 GELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 161 G~~D~iVP~~~~~~l~~~ 178 (1027)
|++|.++|++.+..+.+.
T Consensus 165 G~~D~~~~~~~~~~~~~~ 182 (218)
T 1auo_A 165 GQYDDVVQNAMGRSAFEH 182 (218)
T ss_dssp ETTCSSSCHHHHHHHHHH
T ss_pred eCCCceecHHHHHHHHHH
Confidence 999999999988766554
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.61 E-value=2.2e-15 Score=159.49 Aligned_cols=142 Identities=16% Similarity=0.148 Sum_probs=110.7
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEE--cCCCCCCCCCCCC------C---ccchHHHHHHHHHH
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRM--NFRGVGASSGTYD------S---GNGETDDMEILLRY 99 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~--DlrGhG~S~g~~~------~---~~~~~~Dv~avl~~ 99 (1027)
++.|+|||+||++ ++ ...|..+++.|++ +|.|+++ |++|+|.|..... . ....+.|+.+++++
T Consensus 60 ~~~p~vv~~HG~~---~~--~~~~~~~~~~l~~-~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 133 (251)
T 2r8b_A 60 AGAPLFVLLHGTG---GD--ENQFFDFGARLLP-QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKA 133 (251)
T ss_dssp TTSCEEEEECCTT---CC--HHHHHHHHHHHST-TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCC---CC--HhHHHHHHHhcCC-CceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 3579999999974 33 2357889999987 5999999 8999998764211 1 12236677777777
Q ss_pred HHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC---CCCCCCCcEEEEEeCCCCCCChHHHHhhh
Q psy15208 100 IQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---LIPEVPKNTIIIHGELDEIIPLKDVFLWA 176 (1027)
Q Consensus 100 L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---~l~~i~~PvLiIhG~~D~iVP~~~~~~l~ 176 (1027)
+...++..+++|+||||||.+++.++.++|+ +++++|+++|..... ....+.+|++++||++|.++|++.+..+.
T Consensus 134 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--~v~~~v~~~~~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~ 211 (251)
T 2r8b_A 134 NREHYQAGPVIGLGFSNGANILANVLIEQPE--LFDAAVLMHPLIPFEPKISPAKPTRRVLITAGERDPICPVQLTKALE 211 (251)
T ss_dssp HHHHHTCCSEEEEEETHHHHHHHHHHHHSTT--TCSEEEEESCCCCSCCCCCCCCTTCEEEEEEETTCTTSCHHHHHHHH
T ss_pred HHhccCCCcEEEEEECHHHHHHHHHHHhCCc--ccCeEEEEecCCCccccccccccCCcEEEeccCCCccCCHHHHHHHH
Confidence 7665566789999999999999999999998 799999999876543 23456789999999999999999888776
Q ss_pred CCCC
Q psy15208 177 NPLD 180 (1027)
Q Consensus 177 ~~~~ 180 (1027)
+.+.
T Consensus 212 ~~l~ 215 (251)
T 2r8b_A 212 ESLK 215 (251)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.9e-15 Score=161.37 Aligned_cols=115 Identities=10% Similarity=0.075 Sum_probs=85.7
Q ss_pred EecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC------
Q psy15208 10 INGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY------ 83 (1027)
Q Consensus 10 I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~------ 83 (1027)
+...+.++++..+.+ .|+|||+||++. +.. .|..+++.|++ +|+|+++|+||||.|....
T Consensus 13 ~~~~g~~l~~~~~g~--------~~~vv~lHG~~~---~~~--~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~ 78 (297)
T 2qvb_A 13 LEIAGKRMAYIDEGK--------GDAIVFQHGNPT---SSY--LWRNIMPHLEG-LGRLVACDLIGMGASDKLSPSGPDR 78 (297)
T ss_dssp EEETTEEEEEEEESS--------SSEEEEECCTTC---CGG--GGTTTGGGGTT-SSEEEEECCTTSTTSCCCSSCSTTS
T ss_pred EEECCEEEEEEecCC--------CCeEEEECCCCc---hHH--HHHHHHHHHhh-cCeEEEEcCCCCCCCCCCCCccccC
Confidence 333444676655432 478999999843 322 46677888876 5999999999999998642
Q ss_pred CCccchHHHHHHHHHHHHHhCCC-CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 84 DSGNGETDDMEILLRYIQKKYPY-LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 84 ~~~~~~~~Dv~avl~~L~~~~~~-~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
.+...+++|+.++++.+ +. .+++|+||||||.+++.+|.++|+ +++++|+++|..
T Consensus 79 ~~~~~~~~~~~~~l~~~----~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~ 134 (297)
T 2qvb_A 79 YSYGEQRDFLFALWDAL----DLGDHVVLVLHDWGSALGFDWANQHRD--RVQGIAFMEAIV 134 (297)
T ss_dssp SCHHHHHHHHHHHHHHT----TCCSCEEEEEEEHHHHHHHHHHHHSGG--GEEEEEEEEECC
T ss_pred cCHHHHHHHHHHHHHHc----CCCCceEEEEeCchHHHHHHHHHhChH--hhheeeEecccc
Confidence 13345666666666554 33 589999999999999999999998 799999999754
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.8e-15 Score=165.50 Aligned_cols=149 Identities=15% Similarity=0.155 Sum_probs=110.3
Q ss_pred CceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---CccchH
Q psy15208 14 VGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD---SGNGET 90 (1027)
Q Consensus 14 dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~---~~~~~~ 90 (1027)
.+++++..+.+. +|+|||+||++. +.. .|..+++.| ||+|+++|+||||.|..... +....+
T Consensus 69 ~~~~~~~~~g~~-------~~~vv~~hG~~~---~~~--~~~~~~~~l---g~~Vi~~D~~G~G~S~~~~~~~~~~~~~a 133 (330)
T 3p2m_A 69 AGAISALRWGGS-------APRVIFLHGGGQ---NAH--TWDTVIVGL---GEPALAVDLPGHGHSAWREDGNYSPQLNS 133 (330)
T ss_dssp ETTEEEEEESSS-------CCSEEEECCTTC---CGG--GGHHHHHHS---CCCEEEECCTTSTTSCCCSSCBCCHHHHH
T ss_pred CceEEEEEeCCC-------CCeEEEECCCCC---ccc--hHHHHHHHc---CCeEEEEcCCCCCCCCCCCCCCCCHHHHH
Confidence 346777666443 467899999743 322 366666665 99999999999999985332 234456
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC-----------------------cC
Q psy15208 91 DDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK-----------------------KW 147 (1027)
Q Consensus 91 ~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-----------------------~~ 147 (1027)
+|+.++++.+ ...+++|+||||||.+++.+|.++|+ +++++|++++.+. .+
T Consensus 134 ~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (330)
T 3p2m_A 134 ETLAPVLREL----APGAEFVVGMSLGGLTAIRLAAMAPD--LVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREF 207 (330)
T ss_dssp HHHHHHHHHS----STTCCEEEEETHHHHHHHHHHHHCTT--TCSEEEEESCCHHHHHHHHHHTCC-----------CCB
T ss_pred HHHHHHHHHh----CCCCcEEEEECHhHHHHHHHHHhChh--hcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccc
Confidence 6666666554 34589999999999999999999998 7999999986421 00
Q ss_pred --------------------------------------------------------CCCCCCCcEEEEEeCCCCCCChHH
Q psy15208 148 --------------------------------------------------------LIPEVPKNTIIIHGELDEIIPLKD 171 (1027)
Q Consensus 148 --------------------------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~ 171 (1027)
.+..+++|+++++|++|.++|++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~ 287 (330)
T 3p2m_A 208 PSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQD 287 (330)
T ss_dssp SCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHHH
T ss_pred cCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHHH
Confidence 023468999999999999999999
Q ss_pred HHhhhCCCCCce
Q psy15208 172 VFLWANPLDIPV 183 (1027)
Q Consensus 172 ~~~l~~~~~~~~ 183 (1027)
+..+.+.+....
T Consensus 288 ~~~l~~~~~~~~ 299 (330)
T 3p2m_A 288 TAELHRRATHFR 299 (330)
T ss_dssp HHHHHHHCSSEE
T ss_pred HHHHHHhCCCCe
Confidence 988877665443
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-15 Score=164.69 Aligned_cols=141 Identities=12% Similarity=0.044 Sum_probs=102.2
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAG 113 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVG 113 (1027)
|+|||+||++ ++.. .|..+++.|++ ||+|+++|+||||.|.+.. ........+..+.+.+....+..+++|+|
T Consensus 52 ~~lvllHG~~---~~~~--~~~~l~~~L~~-~~~v~~~D~~G~G~S~~~~-~~~~~~~~a~~~~~~l~~~~~~~~~~lvG 124 (280)
T 3qmv_A 52 LRLVCFPYAG---GTVS--AFRGWQERLGD-EVAVVPVQLPGRGLRLRER-PYDTMEPLAEAVADALEEHRLTHDYALFG 124 (280)
T ss_dssp EEEEEECCTT---CCGG--GGTTHHHHHCT-TEEEEECCCTTSGGGTTSC-CCCSHHHHHHHHHHHHHHTTCSSSEEEEE
T ss_pred ceEEEECCCC---CChH--HHHHHHHhcCC-CceEEEEeCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 7899999974 3332 47789999987 9999999999999997543 22223333333444443333556899999
Q ss_pred echhHHHHHHHHHhcCCcCC--ccEEEEEccCCCcC--------------------------------------------
Q psy15208 114 FSFGTFVQAKLQKRLDKEIS--IKILILISVAVKKW-------------------------------------------- 147 (1027)
Q Consensus 114 hSmGG~vAl~~A~~~p~~~~--V~gLVli~p~~~~~-------------------------------------------- 147 (1027)
|||||.+|+.+|.++|+... +..+++.++..+..
T Consensus 125 ~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (280)
T 3qmv_A 125 HSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRA 204 (280)
T ss_dssp ETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC---------CCTTHHHHHH
T ss_pred eCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHHHHHHHHH
Confidence 99999999999999987321 23777776432100
Q ss_pred -----------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCC
Q psy15208 148 -----------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDI 181 (1027)
Q Consensus 148 -----------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~ 181 (1027)
.+..+++|+++++|++|.++|++....|.+....
T Consensus 205 ~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~ 249 (280)
T 3qmv_A 205 DLRACERYDWHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTG 249 (280)
T ss_dssp HHHHHHTCCCCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBSS
T ss_pred HHHHHHhccccCCCceecCeEEEEecCCCCcChHHHHHHHHhcCC
Confidence 0256789999999999999999999988876544
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.60 E-value=9.3e-15 Score=164.09 Aligned_cols=115 Identities=15% Similarity=0.115 Sum_probs=88.6
Q ss_pred ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEE----cCCCCCCCCCCCCCccchH
Q psy15208 15 GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRM----NFRGVGASSGTYDSGNGET 90 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~----DlrGhG~S~g~~~~~~~~~ 90 (1027)
..+++..+.|.+ ..+|+|||+||++....++ ..|..+++.| +.||+|+++ |+||||.|.. ....
T Consensus 24 ~~~~y~~~g~~~----~~~~~vvllHG~~~~~~~~--~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~~-----~~~~ 91 (335)
T 2q0x_A 24 PYCKIPVFMMNM----DARRCVLWVGGQTESLLSF--DYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQDH-----AHDA 91 (335)
T ss_dssp TTEEEEEEEECT----TSSSEEEEECCTTCCTTCS--TTHHHHHHHH-TTTCEEEEECCGGGBTTSCSCCH-----HHHH
T ss_pred CceeEEEeccCC----CCCcEEEEECCCCccccch--hHHHHHHHHH-HCCcEEEEEeccCCCCCCCCccc-----cCcH
Confidence 456666565322 2467899999986422222 2477889988 679999999 5599999863 2357
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHh--cCCcCCccEEEEEccC
Q psy15208 91 DDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKR--LDKEISIKILILISVA 143 (1027)
Q Consensus 91 ~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~--~p~~~~V~gLVli~p~ 143 (1027)
.|+.++++++....+..+++|+||||||.+++.+|.+ +|+ +++++|+++|.
T Consensus 92 ~d~~~~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~--rV~~lVL~~~~ 144 (335)
T 2q0x_A 92 EDVDDLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKS--SITRVILHGVV 144 (335)
T ss_dssp HHHHHHHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGG--GEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchh--ceeEEEEECCc
Confidence 8899999988876777799999999999999999994 677 79999998863
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.60 E-value=8.5e-15 Score=174.87 Aligned_cols=169 Identities=15% Similarity=0.194 Sum_probs=131.8
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCC---CCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRG---VGAS 79 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrG---hG~S 79 (1027)
..+.+.+++.+| +++++++.|++. .++.|+||++||++..... ..|..+++.|+++||.|+++|+|| ||.|
T Consensus 332 ~~~~~~~~~~~g~~i~~~~~~p~~~--~~~~p~vv~~HG~~~~~~~---~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s 406 (582)
T 3o4h_A 332 GSRLVWVESFDGSRVPTYVLESGRA--PTPGPTVVLVHGGPFAEDS---DSWDTFAASLAAAGFHVVMPNYRGSTGYGEE 406 (582)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTS--CSSEEEEEEECSSSSCCCC---SSCCHHHHHHHHTTCEEEEECCTTCSSSCHH
T ss_pred cceEEEEECCCCCEEEEEEEcCCCC--CCCCcEEEEECCCcccccc---cccCHHHHHHHhCCCEEEEeccCCCCCCchh
Confidence 346678888787 899999999852 1368999999997543221 235678999999999999999999 5554
Q ss_pred CC---CCCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC---------
Q psy15208 80 SG---TYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW--------- 147 (1027)
Q Consensus 80 ~g---~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~--------- 147 (1027)
.. .........+|+.++++++......++++|+||||||.+++.++.++|+ +++++|+.+|.....
T Consensus 407 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v~~~~~~~~~~~~~~~~~~ 484 (582)
T 3o4h_A 407 WRLKIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPG--LFKAGVAGASVVDWEEMYELSDAA 484 (582)
T ss_dssp HHHTTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTT--TSSCEEEESCCCCHHHHHHTCCHH
T ss_pred HHhhhhhhcccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCC--ceEEEEEcCCccCHHHHhhcccch
Confidence 21 1112345689999999999887443489999999999999999999998 799999999853310
Q ss_pred -----------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 148 -----------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 148 -----------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
.+.++.+|+|++||++|..+|++.+..+++.+
T Consensus 485 ~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l 539 (582)
T 3o4h_A 485 FRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGEL 539 (582)
T ss_dssp HHHHHHHHTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHH
T ss_pred hHHHHHHHcCcCHHHHHhcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHH
Confidence 14567899999999999999999988776543
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.2e-15 Score=173.12 Aligned_cols=162 Identities=12% Similarity=0.100 Sum_probs=123.6
Q ss_pred ceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHH-HHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQT-LVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~-la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
..+.+.++..++++.++++.+.+ ++.|+|||+||+ +++.. .|.. +...+.++||.|+++|+||||.|.+.
T Consensus 134 ~~~~~~i~~~~~~l~~~~~~~~~----~~~p~vv~~HG~---~~~~~--~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~ 204 (405)
T 3fnb_A 134 PLKSIEVPFEGELLPGYAIISED----KAQDTLIVVGGG---DTSRE--DLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQ 204 (405)
T ss_dssp CCEEEEEEETTEEEEEEEECCSS----SCCCEEEEECCS---SCCHH--HHHHHTHHHHHHTTCEEEEECCTTSTTGGGG
T ss_pred CcEEEEEeECCeEEEEEEEcCCC----CCCCEEEEECCC---CCCHH--HHHHHHHHHHHhCCcEEEEEcCCCCcCCCCC
Confidence 45677888877789888875433 345999999997 33322 2333 34456678999999999999999643
Q ss_pred C-CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC--------------
Q psy15208 83 Y-DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW-------------- 147 (1027)
Q Consensus 83 ~-~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~-------------- 147 (1027)
. ........|+.++++++.... .+++|+||||||.+++.++.++| +++++|+++|.....
T Consensus 205 ~~~~~~~~~~d~~~~~~~l~~~~--~~v~l~G~S~GG~~a~~~a~~~p---~v~~~v~~~p~~~~~~~~~~~~~~~~~~p 279 (405)
T 3fnb_A 205 GLHFEVDARAAISAILDWYQAPT--EKIAIAGFSGGGYFTAQAVEKDK---RIKAWIASTPIYDVAEVFRISFSTALKAP 279 (405)
T ss_dssp TCCCCSCTHHHHHHHHHHCCCSS--SCEEEEEETTHHHHHHHHHTTCT---TCCEEEEESCCSCHHHHHHHHCC------
T ss_pred CCCCCccHHHHHHHHHHHHHhcC--CCEEEEEEChhHHHHHHHHhcCc---CeEEEEEecCcCCHHHHHHHhhhhhhhCc
Confidence 2 223456899999999987754 58999999999999999999887 489999999854210
Q ss_pred ------------------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 148 ------------------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 148 ------------------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
.+..+++|+|++||++|.++|++.+..+.+.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l 359 (405)
T 3fnb_A 280 KTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNF 359 (405)
T ss_dssp ------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHh
Confidence 04567899999999999999999988776654
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.60 E-value=6.7e-15 Score=158.14 Aligned_cols=119 Identities=10% Similarity=0.080 Sum_probs=87.7
Q ss_pred eEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-
Q psy15208 5 TKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY- 83 (1027)
Q Consensus 5 ~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~- 83 (1027)
.+...+.+.++.++++ + .+ .+|+|||+||++.. ++ ...|..+++.|+ +||+|+++|+||||.|+...
T Consensus 21 ~~~~~v~~~~~~~~~~-~-~~------~~p~vv~lHG~G~~-~~--~~~~~~~~~~L~-~~~~vi~~D~~G~G~S~~~~~ 88 (292)
T 3l80_A 21 LNKEMVNTLLGPIYTC-H-RE------GNPCFVFLSGAGFF-ST--ADNFANIIDKLP-DSIGILTIDAPNSGYSPVSNQ 88 (292)
T ss_dssp CEEEEECCTTSCEEEE-E-EC------CSSEEEEECCSSSC-CH--HHHTHHHHTTSC-TTSEEEEECCTTSTTSCCCCC
T ss_pred cCcceEEecCceEEEe-c-CC------CCCEEEEEcCCCCC-cH--HHHHHHHHHHHh-hcCeEEEEcCCCCCCCCCCCc
Confidence 3445677777877665 2 22 24789999976432 11 235778888887 59999999999999998322
Q ss_pred --CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEc
Q psy15208 84 --DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILIS 141 (1027)
Q Consensus 84 --~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~ 141 (1027)
.+...+++|+.++++.+ +..+++|+||||||.+++.+|.++|+ +++++|+++
T Consensus 89 ~~~~~~~~~~~l~~~l~~~----~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~ 142 (292)
T 3l80_A 89 ANVGLRDWVNAILMIFEHF----KFQSYLLCVHSIGGFAALQIMNQSSK--ACLGFIGLE 142 (292)
T ss_dssp TTCCHHHHHHHHHHHHHHS----CCSEEEEEEETTHHHHHHHHHHHCSS--EEEEEEEES
T ss_pred ccccHHHHHHHHHHHHHHh----CCCCeEEEEEchhHHHHHHHHHhCch--heeeEEEEC
Confidence 23344555555555443 44589999999999999999999998 799999999
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.60 E-value=5.7e-15 Score=152.62 Aligned_cols=139 Identities=16% Similarity=0.116 Sum_probs=103.6
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEc-------------CCCCCCCCCCCCCc---cchHHHHH
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMN-------------FRGVGASSGTYDSG---NGETDDME 94 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~D-------------lrGhG~S~g~~~~~---~~~~~Dv~ 94 (1027)
+..| |||+||++. +.. .|..+++.|+ .++.|+++| ++|||.+.....+. .....++.
T Consensus 15 ~~~p-vv~lHG~g~---~~~--~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~ 87 (209)
T 3og9_A 15 DLAP-LLLLHSTGG---DEH--QLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLT 87 (209)
T ss_dssp TSCC-EEEECCTTC---CTT--TTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHH
T ss_pred CCCC-EEEEeCCCC---CHH--HHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHHHHHHHHHH
Confidence 4567 999999753 333 3678888887 699999999 77777755322222 23445555
Q ss_pred HHHHHHHHhCCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC---CCCCCCCcEEEEEeCCCCCCCh
Q psy15208 95 ILLRYIQKKYPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---LIPEVPKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 95 avl~~L~~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---~l~~i~~PvLiIhG~~D~iVP~ 169 (1027)
.+++.+...+.. .+++|+||||||.+++.++.++|+ +++++|++++..+.. ......+|++++||++|+++|+
T Consensus 88 ~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~ 165 (209)
T 3og9_A 88 DEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKI--NFDKIIAFHGMQLEDFEQTVQLDDKHVFLSYAPNDMIVPQ 165 (209)
T ss_dssp HHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSC--CCSEEEEESCCCCCCCCCCCCCTTCEEEEEECTTCSSSCH
T ss_pred HHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCc--ccceEEEECCCCCCcccccccccCCCEEEEcCCCCCccCH
Confidence 566655554433 579999999999999999999998 799999999865432 2345679999999999999999
Q ss_pred HHHHhhhCC
Q psy15208 170 KDVFLWANP 178 (1027)
Q Consensus 170 ~~~~~l~~~ 178 (1027)
+.+..+.+.
T Consensus 166 ~~~~~~~~~ 174 (209)
T 3og9_A 166 KNFGDLKGD 174 (209)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888765543
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.3e-14 Score=153.31 Aligned_cols=141 Identities=15% Similarity=0.166 Sum_probs=107.0
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhCCCCc
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKKYPYLP 108 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~~~~~p 108 (1027)
..+|+|||+||++ ++. ..|..+++.|++ +|+|+++|+||||.|.... .+....++|+.++++.+ +..+
T Consensus 18 ~~~~~vv~~HG~~---~~~--~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~----~~~~ 87 (267)
T 3fla_A 18 DARARLVCLPHAG---GSA--SFFFPLAKALAP-AVEVLAVQYPGRQDRRHEPPVDSIGGLTNRLLEVLRPF----GDRP 87 (267)
T ss_dssp TCSEEEEEECCTT---CCG--GGGHHHHHHHTT-TEEEEEECCTTSGGGTTSCCCCSHHHHHHHHHHHTGGG----TTSC
T ss_pred CCCceEEEeCCCC---CCc--hhHHHHHHHhcc-CcEEEEecCCCCCCCCCCCCCcCHHHHHHHHHHHHHhc----CCCc
Confidence 4678999999974 332 357889999976 5999999999999997643 23334445544444433 4568
Q ss_pred EEEEEechhHHHHHHHHHhcCCc--CCccEEEEEccCCCcC---------------------------------------
Q psy15208 109 IILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVAVKKW--------------------------------------- 147 (1027)
Q Consensus 109 viLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~~~~~--------------------------------------- 147 (1027)
++|+||||||.+++.++.++|+. ..+++++++++..+..
T Consensus 88 ~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (267)
T 3fla_A 88 LALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLADPELLAMVL 167 (267)
T ss_dssp EEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHHSHHHHHHHH
T ss_pred eEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhccCHHHHHHHH
Confidence 99999999999999999999972 1289999998653211
Q ss_pred ----------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCC
Q psy15208 148 ----------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDI 181 (1027)
Q Consensus 148 ----------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~ 181 (1027)
....+.+|+++++|++|.++|++....+.+....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 217 (267)
T 3fla_A 168 PAIRSDYRAVETYRHEPGRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTG 217 (267)
T ss_dssp HHHHHHHHHHHHCCCCTTCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSS
T ss_pred HHHHHHHHhhhcccccccCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC
Confidence 0136789999999999999999999988876654
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.60 E-value=4.6e-15 Score=157.48 Aligned_cols=94 Identities=16% Similarity=0.263 Sum_probs=71.6
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEEe
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGF 114 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGh 114 (1027)
+|||+||++. +. ..|..+++.|++ +|+|+++|+||||.|... .. ... ..+++.+....+ .+++|+||
T Consensus 15 ~vvllHG~~~---~~--~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~-~~-~~~----~~~~~~l~~~l~-~~~~lvGh 81 (258)
T 1m33_A 15 HLVLLHGWGL---NA--EVWRCIDEELSS-HFTLHLVDLPGFGRSRGF-GA-LSL----ADMAEAVLQQAP-DKAIWLGW 81 (258)
T ss_dssp EEEEECCTTC---CG--GGGGGTHHHHHT-TSEEEEECCTTSTTCCSC-CC-CCH----HHHHHHHHTTSC-SSEEEEEE
T ss_pred eEEEECCCCC---Ch--HHHHHHHHHhhc-CcEEEEeeCCCCCCCCCC-CC-cCH----HHHHHHHHHHhC-CCeEEEEE
Confidence 7899999843 32 247778888875 899999999999999865 21 122 223333444444 68999999
Q ss_pred chhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 115 SFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 115 SmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
||||.+|+.+|.++|+ +++++|++++.
T Consensus 82 S~Gg~va~~~a~~~p~--~v~~lvl~~~~ 108 (258)
T 1m33_A 82 SLGGLVASQIALTHPE--RVRALVTVASS 108 (258)
T ss_dssp THHHHHHHHHHHHCGG--GEEEEEEESCC
T ss_pred CHHHHHHHHHHHHhhH--hhceEEEECCC
Confidence 9999999999999998 79999998753
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.59 E-value=3.7e-15 Score=165.50 Aligned_cols=119 Identities=15% Similarity=0.092 Sum_probs=82.5
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCC--------hHHHHHHHH---HHHhCCcEEEEEcCCC--CCCCCCC
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMD--------NKVVQTLVR---VMLSLGYISIRMNFRG--VGASSGT 82 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~--------~~~~~~la~---~La~~Gy~Vla~DlrG--hG~S~g~ 82 (1027)
++++..+.+.+ .+..|+|||+||++.....+. ...|..++. .|.++||+|+++|+|| ||.|...
T Consensus 32 ~l~y~~~g~~~---~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~ 108 (366)
T 2pl5_A 32 VIAYETYGTLS---SSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPL 108 (366)
T ss_dssp EEEEEEEECCC---TTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTT
T ss_pred eeeEEeccCcC---CCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCC
Confidence 46666665543 123578999999865433100 002445553 4556799999999999 8888642
Q ss_pred C---------------CCccchHHHHHHHHHHHHHhCCCCcE-EEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 83 Y---------------DSGNGETDDMEILLRYIQKKYPYLPI-ILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 83 ~---------------~~~~~~~~Dv~avl~~L~~~~~~~pv-iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
. .+...+++|+.++++.+ +..++ +|+||||||.+++.+|.++|+ +++++|++++.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 179 (366)
T 2pl5_A 109 SIHPETSTPYGSRFPFVSIQDMVKAQKLLVESL----GIEKLFCVAGGSMGGMQALEWSIAYPN--SLSNCIVMAST 179 (366)
T ss_dssp SBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT----TCSSEEEEEEETHHHHHHHHHHHHSTT--SEEEEEEESCC
T ss_pred CCCCCCCccccCCCCcccHHHHHHHHHHHHHHc----CCceEEEEEEeCccHHHHHHHHHhCcH--hhhheeEeccC
Confidence 1 13344566666655543 44578 899999999999999999998 79999999874
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.59 E-value=6e-14 Score=156.56 Aligned_cols=129 Identities=19% Similarity=0.195 Sum_probs=104.8
Q ss_pred ceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL-GYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~-Gy~Vla~DlrGhG~S~g~ 82 (1027)
..+.+.+.+++|.+.+.+|.|.+ ..+.|+|||+||+++..++.. .|..+++.|+++ ||.|+++|+||+|.+...
T Consensus 64 ~~~~~~i~~~~~~i~~~iy~P~~---~~~~p~vv~~HGGg~~~g~~~--~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~p 138 (323)
T 3ain_A 64 KIEDITIPGSETNIKARVYYPKT---QGPYGVLVYYHGGGFVLGDIE--SYDPLCRAITNSCQCVTISVDYRLAPENKFP 138 (323)
T ss_dssp EEEEEEEECSSSEEEEEEEECSS---CSCCCEEEEECCSTTTSCCTT--TTHHHHHHHHHHHTSEEEEECCCCTTTSCTT
T ss_pred EEEEEEecCCCCeEEEEEEecCC---CCCCcEEEEECCCccccCChH--HHHHHHHHHHHhcCCEEEEecCCCCCCCCCc
Confidence 45678889888899999999975 246799999999776566655 367888889864 999999999999987532
Q ss_pred CCCccchHHHHHHHHHHHHHhC----CCCcEEEEEechhHHHHHHHHHhcCCcCCc---cEEEEEccCC
Q psy15208 83 YDSGNGETDDMEILLRYIQKKY----PYLPIILAGFSFGTFVQAKLQKRLDKEISI---KILILISVAV 144 (1027)
Q Consensus 83 ~~~~~~~~~Dv~avl~~L~~~~----~~~pviLVGhSmGG~vAl~~A~~~p~~~~V---~gLVli~p~~ 144 (1027)
....|+.++++++.... +..+++|+||||||.+|+.++.++|+ +. +++|+++|..
T Consensus 139 -----~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~--~~~~~~~~vl~~p~~ 200 (323)
T 3ain_A 139 -----AAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKK--ENIKLKYQVLIYPAV 200 (323)
T ss_dssp -----HHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHH--TTCCCSEEEEESCCC
T ss_pred -----chHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhh--cCCCceeEEEEeccc
Confidence 36788889999987653 45579999999999999999999887 33 8999998853
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.59 E-value=7.2e-15 Score=162.82 Aligned_cols=97 Identities=13% Similarity=0.162 Sum_probs=74.3
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---CccchHHHHHHHHHHHHHhCCC-Cc
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD---SGNGETDDMEILLRYIQKKYPY-LP 108 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~---~~~~~~~Dv~avl~~L~~~~~~-~p 108 (1027)
.|+|||+||++. +. ..|..+++.|++ .|+|+++|+||||.|+.... +...+++|+.++++. .+. .+
T Consensus 43 ~~~vvllHG~~~---~~--~~w~~~~~~L~~-~~~via~Dl~GhG~S~~~~~~~~~~~~~a~dl~~ll~~----l~~~~~ 112 (318)
T 2psd_A 43 ENAVIFLHGNAT---SS--YLWRHVVPHIEP-VARCIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAWFEL----LNLPKK 112 (318)
T ss_dssp TSEEEEECCTTC---CG--GGGTTTGGGTTT-TSEEEEECCTTSTTCCCCTTSCCSHHHHHHHHHHHHTT----SCCCSS
T ss_pred CCeEEEECCCCC---cH--HHHHHHHHHhhh-cCeEEEEeCCCCCCCCCCCCCccCHHHHHHHHHHHHHh----cCCCCC
Confidence 468999999853 22 246778888876 58999999999999986421 233455555555543 344 58
Q ss_pred EEEEEechhHHHHHHHHHhcCCcCCccEEEEEc
Q psy15208 109 IILAGFSFGTFVQAKLQKRLDKEISIKILILIS 141 (1027)
Q Consensus 109 viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~ 141 (1027)
++|+||||||.+|+.+|.++|+ +++++|+++
T Consensus 113 ~~lvGhSmGg~ia~~~A~~~P~--~v~~lvl~~ 143 (318)
T 2psd_A 113 IIFVGHDWGAALAFHYAYEHQD--RIKAIVHME 143 (318)
T ss_dssp EEEEEEEHHHHHHHHHHHHCTT--SEEEEEEEE
T ss_pred eEEEEEChhHHHHHHHHHhChH--hhheEEEec
Confidence 9999999999999999999999 799999976
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.59 E-value=2.4e-14 Score=153.85 Aligned_cols=120 Identities=13% Similarity=0.297 Sum_probs=87.1
Q ss_pred EEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHH-----HHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 9 NINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQT-----LVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 9 ~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~-----la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
+....+.++++..+.+.+ ..+|+|||+||++. +.. ..|.. +++.|++ +|+|+++|+||||.|....
T Consensus 15 ~~~~~~~~l~y~~~G~~~----~~~p~vvllHG~~~---~~~-~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~s~~~~ 85 (286)
T 2qmq_A 15 SVETPYGSVTFTVYGTPK----PKRPAIFTYHDVGL---NYK-SCFQPLFRFGDMQEIIQ-NFVRVHVDAPGMEEGAPVF 85 (286)
T ss_dssp EEEETTEEEEEEEESCCC----TTCCEEEEECCTTC---CHH-HHHHHHHTSHHHHHHHT-TSCEEEEECTTTSTTCCCC
T ss_pred ccccCCeEEEEEeccCCC----CCCCeEEEeCCCCC---Cch-hhhhhhhhhchhHHHhc-CCCEEEecCCCCCCCCCCC
Confidence 344444577777765532 24688999999742 221 12443 7788876 6999999999999876432
Q ss_pred C------CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 84 D------SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 84 ~------~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+ +....++|+.++++.+ +..+++|+||||||.+++.+|.++|+ +++++|+++|.
T Consensus 86 ~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 145 (286)
T 2qmq_A 86 PLGYQYPSLDQLADMIPCILQYL----NFSTIIGVGVGAGAYILSRYALNHPD--TVEGLVLINID 145 (286)
T ss_dssp CTTCCCCCHHHHHHTHHHHHHHH----TCCCEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCC
T ss_pred CCCCCccCHHHHHHHHHHHHHHh----CCCcEEEEEEChHHHHHHHHHHhChh--heeeEEEECCC
Confidence 1 3445666766666655 33489999999999999999999998 79999999984
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=8.4e-15 Score=152.54 Aligned_cols=142 Identities=15% Similarity=0.094 Sum_probs=106.0
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHh--CCcEEEEEcCC-------------------CCCCCCCCC-CCccc
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS--LGYISIRMNFR-------------------GVGASSGTY-DSGNG 88 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~--~Gy~Vla~Dlr-------------------GhG~S~g~~-~~~~~ 88 (1027)
+++|+|||+||++ ++.. .|..+++.|++ +||.|+++|+| |+|.+.... .....
T Consensus 22 ~~~~~vv~lHG~~---~~~~--~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~ 96 (226)
T 3cn9_A 22 NADACIIWLHGLG---ADRT--DFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNA 96 (226)
T ss_dssp TCCEEEEEECCTT---CCGG--GGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBCHHHHHH
T ss_pred CCCCEEEEEecCC---CChH--HHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccccchhHHH
Confidence 4689999999974 3332 47789999987 89999998777 555432211 11234
Q ss_pred hHHHHHHHHHHHHH-hCCCCcEEEEEechhHHHHHHHHH-hcCCcCCccEEEEEccCCCcC-----CCCCCCCcEEEEEe
Q psy15208 89 ETDDMEILLRYIQK-KYPYLPIILAGFSFGTFVQAKLQK-RLDKEISIKILILISVAVKKW-----LIPEVPKNTIIIHG 161 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~-~~~~~pviLVGhSmGG~vAl~~A~-~~p~~~~V~gLVli~p~~~~~-----~l~~i~~PvLiIhG 161 (1027)
.+.++..+++.+.. ..+..+++|+||||||.+++.++. ++|+ +++++|+++|..... ....+.+|+++++|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~P~lii~G 174 (226)
T 3cn9_A 97 SADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQ--PLGGVLALSTYAPTFDDLALDERHKRIPVLHLHG 174 (226)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSS--CCSEEEEESCCCGGGGGCCCCTGGGGCCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCcc--CcceEEEecCcCCCchhhhhcccccCCCEEEEec
Confidence 56666677776654 223358999999999999999999 9988 799999999875432 12456799999999
Q ss_pred CCCCCCChHHHHhhhCCC
Q psy15208 162 ELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 162 ~~D~iVP~~~~~~l~~~~ 179 (1027)
++|.++|++.+..+.+.+
T Consensus 175 ~~D~~~~~~~~~~~~~~l 192 (226)
T 3cn9_A 175 SQDDVVDPALGRAAHDAL 192 (226)
T ss_dssp TTCSSSCHHHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHH
Confidence 999999999887666543
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.58 E-value=9e-15 Score=151.86 Aligned_cols=140 Identities=19% Similarity=0.093 Sum_probs=106.0
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEE--cCCCCCCCCCCC------CCccchHHH---HHHHHHH
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRM--NFRGVGASSGTY------DSGNGETDD---MEILLRY 99 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~--DlrGhG~S~g~~------~~~~~~~~D---v~avl~~ 99 (1027)
+++|+|||+||++. +.. .|..+++.|++ ||.|+++ |+||+|.|.... ........+ +..+++.
T Consensus 36 ~~~~~vv~~HG~~~---~~~--~~~~~~~~l~~-g~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 109 (226)
T 2h1i_A 36 TSKPVLLLLHGTGG---NEL--DLLPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDE 109 (226)
T ss_dssp TTSCEEEEECCTTC---CTT--TTHHHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCCC---Chh--HHHHHHHHhcc-CceEEEecCcccCCcchhhccccCccCcChhhHHHHHHHHHHHHHH
Confidence 36799999999853 332 36788899987 9999999 899999875321 022233444 4455555
Q ss_pred HHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC---CCCCCCCcEEEEEeCCCCCCChHHHHh
Q psy15208 100 IQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---LIPEVPKNTIIIHGELDEIIPLKDVFL 174 (1027)
Q Consensus 100 L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---~l~~i~~PvLiIhG~~D~iVP~~~~~~ 174 (1027)
+...+ +..+++++||||||.+++.++.++|+ +++++|+++|..... ......+|+++++|++|.++|++....
T Consensus 110 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~ 187 (226)
T 2h1i_A 110 AAKEYKFDRNNIVAIGYSNGANIAASLLFHYEN--ALKGAVLHHPMVPRRGMQLANLAGKSVFIAAGTNDPICSSAESEE 187 (226)
T ss_dssp HHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTT--SCSEEEEESCCCSCSSCCCCCCTTCEEEEEEESSCSSSCHHHHHH
T ss_pred HHhhcCCCcccEEEEEEChHHHHHHHHHHhChh--hhCEEEEeCCCCCcCccccccccCCcEEEEeCCCCCcCCHHHHHH
Confidence 55555 44689999999999999999999998 799999999876532 233457999999999999999988776
Q ss_pred hhCC
Q psy15208 175 WANP 178 (1027)
Q Consensus 175 l~~~ 178 (1027)
+.+.
T Consensus 188 ~~~~ 191 (226)
T 2h1i_A 188 LKVL 191 (226)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.8e-14 Score=164.95 Aligned_cols=147 Identities=12% Similarity=0.086 Sum_probs=116.1
Q ss_pred ecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchH
Q psy15208 11 NGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGET 90 (1027)
Q Consensus 11 ~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~ 90 (1027)
...++.+.+.+|.|++ .++.|+||++||++. +. +..+++.|+++||.|+++|+||+|.++..... ...
T Consensus 139 ~~~~~~l~~~l~~P~~---~~~~P~Vv~~hG~~~---~~----~~~~a~~La~~Gy~V~a~D~rG~g~~~~~~~~--~~~ 206 (422)
T 3k2i_A 139 SVRAGRVRATLFLPPG---PGPFPGIIDIFGIGG---GL----LEYRASLLAGHGFATLALAYYNFEDLPNNMDN--ISL 206 (422)
T ss_dssp EEEETTEEEEEEECSS---SCCBCEEEEECCTTC---SC----CCHHHHHHHTTTCEEEEEECSSSTTSCSSCSC--EET
T ss_pred EEeCCcEEEEEEcCCC---CCCcCEEEEEcCCCc---ch----hHHHHHHHHhCCCEEEEEccCCCCCCCCCccc--CCH
Confidence 3445578999999976 356899999999742 22 23458889999999999999999988765433 347
Q ss_pred HHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC---------------------
Q psy15208 91 DDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW--------------------- 147 (1027)
Q Consensus 91 ~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~--------------------- 147 (1027)
+|+.++++++..... ..+++|+||||||.+++.+|.++|+ ++++|++++.....
T Consensus 207 ~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~---v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (422)
T 3k2i_A 207 EYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN---VSATVSINGSGISGNTAINYKHSSIPPLGYDLRRI 283 (422)
T ss_dssp HHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS---EEEEEEESCCSBCCSSCEEETTEEECCCCBCGGGC
T ss_pred HHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC---ccEEEEEcCcccccCCchhhcCCcCCCcccchhhc
Confidence 888999999987643 4589999999999999999999986 89999988754100
Q ss_pred ---------------------------CCCCCCCcEEEEEeCCCCCCChHHH
Q psy15208 148 ---------------------------LIPEVPKNTIIIHGELDEIIPLKDV 172 (1027)
Q Consensus 148 ---------------------------~l~~i~~PvLiIhG~~D~iVP~~~~ 172 (1027)
.+.++.+|+|++||++|.++|++..
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~ 335 (422)
T 3k2i_A 284 KVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELY 335 (422)
T ss_dssp EECTTSCEECTTCBCCCTTGGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHH
T ss_pred ccCcchhHHHHHHHhhhhhcccccccccHHHCCCCEEEEEeCCCCCCCHHHH
Confidence 1345789999999999999999854
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.4e-14 Score=175.20 Aligned_cols=171 Identities=15% Similarity=0.160 Sum_probs=131.4
Q ss_pred ceEEEEEecCCc--eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHH-----HHHHHHHhCCcEEEEEcCCCC
Q psy15208 4 NTKFFNINGSVG--ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQ-----TLVRVMLSLGYISIRMNFRGV 76 (1027)
Q Consensus 4 ~~~~i~I~t~dG--~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~-----~la~~La~~Gy~Vla~DlrGh 76 (1027)
..+.+.+.+.+| +++++++.|++....++.|+||++||++........ |. .+++.|+++||.|+++|+||+
T Consensus 486 ~~~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~--~~~~~~~~~~~~l~~~G~~v~~~d~rG~ 563 (741)
T 2ecf_A 486 PVEFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDS--WPGRGDHLFNQYLAQQGYVVFSLDNRGT 563 (741)
T ss_dssp CEEEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSC--CCCSHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred CcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCccccccc--ccccchhHHHHHHHhCCCEEEEEecCCC
Confidence 456788988888 799999998752223457899999997643211111 22 588899999999999999999
Q ss_pred CCCCCCC-----CCc-cchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc--
Q psy15208 77 GASSGTY-----DSG-NGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-- 146 (1027)
Q Consensus 77 G~S~g~~-----~~~-~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-- 146 (1027)
|.|...+ ..+ .....|+.++++++.... +..+++|+||||||.+++.++.++|+ +++++|+.+|....
T Consensus 564 g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v~~~~~~~~~~ 641 (741)
T 2ecf_A 564 PRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASD--SYACGVAGAPVTDWGL 641 (741)
T ss_dssp SSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTT--TCSEEEEESCCCCGGG
T ss_pred CCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCC--ceEEEEEcCCCcchhh
Confidence 9986421 111 235899999999998753 23479999999999999999999998 79999999985321
Q ss_pred -------------C-------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 147 -------------W-------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 147 -------------~-------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
+ .+..+.+|+|++||++|..+|++.+..+++.
T Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~ 699 (741)
T 2ecf_A 642 YDSHYTERYMDLPARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSA 699 (741)
T ss_dssp SBHHHHHHHHCCTGGGHHHHHHHCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHH
T ss_pred hccccchhhcCCcccChhhhhhcCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHH
Confidence 0 1456789999999999999999988776654
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=3.3e-14 Score=173.25 Aligned_cols=171 Identities=16% Similarity=0.216 Sum_probs=128.6
Q ss_pred ceEEEEEecCCc--eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHH----HHHHHHhCCcEEEEEcCCCCC
Q psy15208 4 NTKFFNINGSVG--ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQT----LVRVMLSLGYISIRMNFRGVG 77 (1027)
Q Consensus 4 ~~~~i~I~t~dG--~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~----la~~La~~Gy~Vla~DlrGhG 77 (1027)
..+.+.+.+.+| +++++++.|++....++.|+||++||++....... .|.. +++.|+++||.|+++|+||+|
T Consensus 454 ~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~--~~~~~~~~~~~~la~~G~~v~~~d~rG~g 531 (706)
T 2z3z_A 454 EIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTK--TWRSSVGGWDIYMAQKGYAVFTVDSRGSA 531 (706)
T ss_dssp CEEEEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCS--CC----CCHHHHHHHTTCEEEEECCTTCS
T ss_pred CcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeecc--ccccCchHHHHHHHhCCcEEEEEecCCCc
Confidence 345677888887 79999999975322345789999999653221111 1322 788999999999999999999
Q ss_pred CCCCCC-----CC-ccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc---
Q psy15208 78 ASSGTY-----DS-GNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK--- 146 (1027)
Q Consensus 78 ~S~g~~-----~~-~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~--- 146 (1027)
.|...+ .. ......|+.++++++.... +..+++|+||||||.+++.++.++|+ +++++|+.+|....
T Consensus 532 ~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v~~~~~~~~~~~ 609 (706)
T 2z3z_A 532 NRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGD--VFKVGVAGGPVIDWNRY 609 (706)
T ss_dssp SSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT--TEEEEEEESCCCCGGGS
T ss_pred ccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCC--cEEEEEEcCCccchHHH
Confidence 986421 11 1245789999999987643 23479999999999999999999998 79999999985421
Q ss_pred -------------------------CCCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 147 -------------------------WLIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 147 -------------------------~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
..+..+++|+|++||++|.++|++.+..+++.
T Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~ 666 (706)
T 2z3z_A 610 AIMYGERYFDAPQENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDA 666 (706)
T ss_dssp BHHHHHHHHCCTTTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHH
T ss_pred HhhhhhhhcCCcccChhhhhhCCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHH
Confidence 02456789999999999999999988766654
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.5e-14 Score=163.83 Aligned_cols=135 Identities=14% Similarity=0.098 Sum_probs=106.1
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
.+.+.+.+.+| .+++.+|.|.+. ..+.|+||++||+++..++.....|..+++.|+++||.|+++|+||+|.|.+.
T Consensus 82 ~~~~~~~~~~g~~l~~~v~~p~~~--~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~- 158 (361)
T 1jkm_A 82 TSTETILGVDGNEITLHVFRPAGV--EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGH- 158 (361)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTC--CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEE-
T ss_pred eeeeeeecCCCCeEEEEEEeCCCC--CCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCCC-
Confidence 44667888888 899999999762 12579999999987555665533577889999989999999999999766432
Q ss_pred CCccchHHHHHHHHHHHHHh---CCCCcEEEEEechhHHHHHHHHHh-----cCCcCCccEEEEEccCC
Q psy15208 84 DSGNGETDDMEILLRYIQKK---YPYLPIILAGFSFGTFVQAKLQKR-----LDKEISIKILILISVAV 144 (1027)
Q Consensus 84 ~~~~~~~~Dv~avl~~L~~~---~~~~pviLVGhSmGG~vAl~~A~~-----~p~~~~V~gLVli~p~~ 144 (1027)
........|+..+++|+... ++.++++|+|||+||.+++.++.. +|+ +++++|+++|..
T Consensus 159 ~~~~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~--~i~~~il~~~~~ 225 (361)
T 1jkm_A 159 HPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLD--AIDGVYASIPYI 225 (361)
T ss_dssp CCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGG--GCSEEEEESCCC
T ss_pred CCCCccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCc--CcceEEEECCcc
Confidence 12344678998889998764 244489999999999999999988 665 699999999854
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.57 E-value=6.1e-15 Score=155.51 Aligned_cols=112 Identities=11% Similarity=0.109 Sum_probs=85.9
Q ss_pred CceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCccchHH
Q psy15208 14 VGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGNGETD 91 (1027)
Q Consensus 14 dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~ 91 (1027)
+.++++..+.+++ .|+|||+||++. +.. .|..+++.|++ +|+|+++|+||||.|.... .+....++
T Consensus 8 g~~l~~~~~g~~~------~~~vv~lHG~~~---~~~--~~~~~~~~L~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 75 (264)
T 3ibt_A 8 GTLMTYSESGDPH------APTLFLLSGWCQ---DHR--LFKNLAPLLAR-DFHVICPDWRGHDAKQTDSGDFDSQTLAQ 75 (264)
T ss_dssp TEECCEEEESCSS------SCEEEEECCTTC---CGG--GGTTHHHHHTT-TSEEEEECCTTCSTTCCCCSCCCHHHHHH
T ss_pred CeEEEEEEeCCCC------CCeEEEEcCCCC---cHh--HHHHHHHHHHh-cCcEEEEccccCCCCCCCccccCHHHHHH
Confidence 3366666655433 578999999843 322 47788898965 6999999999999998642 23455667
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhc-CCcCCccEEEEEccC
Q psy15208 92 DMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRL-DKEISIKILILISVA 143 (1027)
Q Consensus 92 Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~-p~~~~V~gLVli~p~ 143 (1027)
|+.++++.+ +..+++|+||||||.+++.+|.++ |+ +++++|++++.
T Consensus 76 ~~~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~~p~--~v~~lvl~~~~ 122 (264)
T 3ibt_A 76 DLLAFIDAK----GIRDFQMVSTSHGCWVNIDVCEQLGAA--RLPKTIIIDWL 122 (264)
T ss_dssp HHHHHHHHT----TCCSEEEEEETTHHHHHHHHHHHSCTT--TSCEEEEESCC
T ss_pred HHHHHHHhc----CCCceEEEecchhHHHHHHHHHhhChh--hhheEEEecCC
Confidence 766666654 445899999999999999999999 98 79999999864
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.57 E-value=5.6e-15 Score=162.00 Aligned_cols=162 Identities=14% Similarity=0.164 Sum_probs=121.8
Q ss_pred EEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccc
Q psy15208 9 NINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNG 88 (1027)
Q Consensus 9 ~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~ 88 (1027)
.+...+..+...+|.|.+. .++.|+|||+||+++..++.. .+..+++.|+++||.|+++|+||+|.+. ...
T Consensus 60 ~i~y~~~~~~~~~~~p~~~--~~~~p~vv~~HGgg~~~~~~~--~~~~~~~~l~~~G~~v~~~d~r~~~~~~-----~~~ 130 (303)
T 4e15_A 60 HLRYGEGRQLVDVFYSEKT--TNQAPLFVFVHGGYWQEMDMS--MSCSIVGPLVRRGYRVAVMDYNLCPQVT-----LEQ 130 (303)
T ss_dssp EEECSSTTCEEEEEECTTC--CTTCCEEEEECCSTTTSCCGG--GSCTTHHHHHHTTCEEEEECCCCTTTSC-----HHH
T ss_pred eeccCCCCcEEEEEecCCC--CCCCCEEEEECCCcCcCCChh--HHHHHHHHHHhCCCEEEEecCCCCCCCC-----hhH
Confidence 3443333566777778642 256899999999776555544 3566889999999999999999998753 345
Q ss_pred hHHHHHHHHHHHHH---hCCCCcEEEEEechhHHHHHHHHHhcCCc-----CCccEEEEEccCCCc--------------
Q psy15208 89 ETDDMEILLRYIQK---KYPYLPIILAGFSFGTFVQAKLQKRLDKE-----ISIKILILISVAVKK-------------- 146 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~---~~~~~pviLVGhSmGG~vAl~~A~~~p~~-----~~V~gLVli~p~~~~-------------- 146 (1027)
...|+..+++++.. .++..+++|+||||||.+++.++.+.+.. .+++++|+++|....
T Consensus 131 ~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~ 210 (303)
T 4e15_A 131 LMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLESVNPKNI 210 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHTCTTTSGGGT
T ss_pred HHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhcccccchhhh
Confidence 68899999999876 55667899999999999999999865421 158999999986321
Q ss_pred ---------------CCCCCC----CCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 147 ---------------WLIPEV----PKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 147 ---------------~~l~~i----~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
+.+..+ .+|++++||++|.++|+.++..+++.+
T Consensus 211 ~~~~~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l 262 (303)
T 4e15_A 211 LGLNERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVL 262 (303)
T ss_dssp TCCCTTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHH
Confidence 112222 789999999999999999988776643
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.57 E-value=3.4e-14 Score=156.03 Aligned_cols=132 Identities=14% Similarity=0.137 Sum_probs=105.5
Q ss_pred ceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL-GYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~-Gy~Vla~DlrGhG~S~g~ 82 (1027)
..+.+.+++++|.+.+.+|.|++. .++.|+|||+||+++..++.. .|..+++.|+++ ||.|+++|+||+|.+..
T Consensus 47 ~~~~~~i~~~~g~l~~~~~~P~~~--~~~~p~vv~~HGGg~~~g~~~--~~~~~~~~la~~~g~~v~~~d~rg~~~~~~- 121 (310)
T 2hm7_A 47 EVREFDMDLPGRTLKVRMYRPEGV--EPPYPALVYYHGGSWVVGDLE--THDPVCRVLAKDGRAVVFSVDYRLAPEHKF- 121 (310)
T ss_dssp EEEEEEEEETTEEEEEEEEECTTC--CSSEEEEEEECCSTTTSCCTT--TTHHHHHHHHHHHTSEEEEECCCCTTTSCT-
T ss_pred eEEEEEeccCCCeEEEEEEecCCC--CCCCCEEEEECCCccccCChh--HhHHHHHHHHHhcCCEEEEeCCCCCCCCCC-
Confidence 456788899899999999999752 246789999999776566654 367888999875 99999999999997653
Q ss_pred CCCccchHHHHHHHHHHHHHhC-----CCCcEEEEEechhHHHHHHHHHhcCCc--CCccEEEEEccCC
Q psy15208 83 YDSGNGETDDMEILLRYIQKKY-----PYLPIILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVAV 144 (1027)
Q Consensus 83 ~~~~~~~~~Dv~avl~~L~~~~-----~~~pviLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~~ 144 (1027)
.....|+..+++++.... +..+++|+||||||.+++.++.++|+. .+++++|+++|..
T Consensus 122 ----~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~ 186 (310)
T 2hm7_A 122 ----PAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPST 186 (310)
T ss_dssp ----THHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCC
T ss_pred ----CccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCc
Confidence 246789999999998753 234799999999999999999987752 2589999998753
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.9e-14 Score=166.47 Aligned_cols=146 Identities=12% Similarity=0.094 Sum_probs=114.7
Q ss_pred ecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchH
Q psy15208 11 NGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGET 90 (1027)
Q Consensus 11 ~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~ 90 (1027)
...++.+.+.+|.|++ .++.|+||++||++. +.. ..+++.|+++||.|+++|+||+|.++..... ...
T Consensus 155 ~~~~g~l~~~l~~P~~---~~~~P~Vv~lhG~~~--~~~-----~~~a~~La~~Gy~Vla~D~rG~~~~~~~~~~--~~~ 222 (446)
T 3hlk_A 155 PVRVGRVRGTLFLPPE---PGPFPGIVDMFGTGG--GLL-----EYRASLLAGKGFAVMALAYYNYEDLPKTMET--LHL 222 (446)
T ss_dssp EEEETTEEEEEEECSS---SCCBCEEEEECCSSC--SCC-----CHHHHHHHTTTCEEEEECCSSSTTSCSCCSE--EEH
T ss_pred EecCCeEEEEEEeCCC---CCCCCEEEEECCCCc--chh-----hHHHHHHHhCCCEEEEeccCCCCCCCcchhh--CCH
Confidence 3345578999999976 356799999999742 122 2358889999999999999999988765322 347
Q ss_pred HHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC---------------------
Q psy15208 91 DDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW--------------------- 147 (1027)
Q Consensus 91 ~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~--------------------- 147 (1027)
+|+.++++++..... ..+++|+||||||.+++.+|.++|+ ++++|++++....+
T Consensus 223 ~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~---v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (446)
T 3hlk_A 223 EYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG---ITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRI 299 (446)
T ss_dssp HHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC---EEEEEEESCCSBCCSSEEEETTEEECCCCBCGGGC
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC---ceEEEEEcCcccccCCCccccCccCCccccchhcc
Confidence 899999999987643 3589999999999999999999987 89999998753100
Q ss_pred ---------------------------CCCCCCCcEEEEEeCCCCCCChHH
Q psy15208 148 ---------------------------LIPEVPKNTIIIHGELDEIIPLKD 171 (1027)
Q Consensus 148 ---------------------------~l~~i~~PvLiIhG~~D~iVP~~~ 171 (1027)
.+..+++|+|++||++|.++|+..
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~ 350 (446)
T 3hlk_A 300 KVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEF 350 (446)
T ss_dssp EECSSSCEECTTCBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSCHHH
T ss_pred ccccchHHHHHHHHhchhhccccccccCHHHCCCCEEEEEeCCCCCcChHH
Confidence 145677999999999999999944
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1.6e-13 Score=154.01 Aligned_cols=134 Identities=19% Similarity=0.158 Sum_probs=103.1
Q ss_pred eEEEEEecCCceEEEEEEecCCcc--------------ccCCccEEEEECCCCCCCCCCChHHHHHHHHHHH-hCCcEEE
Q psy15208 5 TKFFNINGSVGILHCAINFPSSIK--------------LLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVML-SLGYISI 69 (1027)
Q Consensus 5 ~~~i~I~t~dG~I~~~l~~P~~~~--------------~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La-~~Gy~Vl 69 (1027)
.+.+.+.. ...+.+.+|.|++.. ..++.|+|||+||+++..++.....|..+++.|+ +.||.|+
T Consensus 72 ~~dv~~~~-~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv 150 (351)
T 2zsh_A 72 SFDVLIDR-RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVV 150 (351)
T ss_dssp EEEEEEET-TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEE
T ss_pred EEEEEecC-CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEE
Confidence 44566655 346888888887521 1246799999999876666655555888999998 6799999
Q ss_pred EEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHh------CCCC-cEEEEEechhHHHHHHHHHhcCCc-CCccEEEEEc
Q psy15208 70 RMNFRGVGASSGTYDSGNGETDDMEILLRYIQKK------YPYL-PIILAGFSFGTFVQAKLQKRLDKE-ISIKILILIS 141 (1027)
Q Consensus 70 a~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~------~~~~-pviLVGhSmGG~vAl~~A~~~p~~-~~V~gLVli~ 141 (1027)
++|+||++.+.. ....+|+.++++++... .+.. +++|+||||||.+++.+|.++|+. .+++++|+++
T Consensus 151 ~~d~rg~~~~~~-----~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~ 225 (351)
T 2zsh_A 151 SVNYRRAPENPY-----PCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLN 225 (351)
T ss_dssp EECCCCTTTSCT-----THHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEES
T ss_pred EecCCCCCCCCC-----chhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEEC
Confidence 999999876542 24688999999999863 2445 899999999999999999988752 2589999998
Q ss_pred cCC
Q psy15208 142 VAV 144 (1027)
Q Consensus 142 p~~ 144 (1027)
|..
T Consensus 226 p~~ 228 (351)
T 2zsh_A 226 PMF 228 (351)
T ss_dssp CCC
T ss_pred Ccc
Confidence 864
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.55 E-value=1e-14 Score=162.89 Aligned_cols=119 Identities=13% Similarity=0.061 Sum_probs=80.5
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCC----ChHHHHHHHH---HHHhCCcEEEEEcCCC-CCCCCCCC----
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTM----DNKVVQTLVR---VMLSLGYISIRMNFRG-VGASSGTY---- 83 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~----~~~~~~~la~---~La~~Gy~Vla~DlrG-hG~S~g~~---- 83 (1027)
++++..+.+.+ ....|+|||+||++...... ...+|..++. .|+++||+|+++|+|| +|.|.+..
T Consensus 45 ~l~y~~~g~~~---~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~~ 121 (377)
T 2b61_A 45 NVAYQTYGTLN---DEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINP 121 (377)
T ss_dssp EEEEEEESCCC---TTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCT
T ss_pred eEEEEeccccc---ccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccCc
Confidence 45555554433 12357899999986433220 0001455553 4767899999999999 68876531
Q ss_pred ------------CCccchHHHHHHHHHHHHHhCCCCcEE-EEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 84 ------------DSGNGETDDMEILLRYIQKKYPYLPII-LAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 84 ------------~~~~~~~~Dv~avl~~L~~~~~~~pvi-LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
.+...+++|+.++++. .+..+++ |+||||||.+++.+|.++|+ +++++|++++.
T Consensus 122 ~~g~~~~~~~~~~~~~~~~~~l~~~l~~----l~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 188 (377)
T 2b61_A 122 QTGKPYGSQFPNIVVQDIVKVQKALLEH----LGISHLKAIIGGSFGGMQANQWAIDYPD--FMDNIVNLCSS 188 (377)
T ss_dssp TTSSBCGGGCCCCCHHHHHHHHHHHHHH----TTCCCEEEEEEETHHHHHHHHHHHHSTT--SEEEEEEESCC
T ss_pred cccccccccCCcccHHHHHHHHHHHHHH----cCCcceeEEEEEChhHHHHHHHHHHCch--hhheeEEeccC
Confidence 1233445555555543 3445787 99999999999999999998 79999999974
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.3e-13 Score=153.03 Aligned_cols=129 Identities=13% Similarity=0.161 Sum_probs=103.1
Q ss_pred ceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~ 82 (1027)
..+.+.+++++|.+.+.+|.|.+ ...|+||++||+++..++.. .|..+++.|++ .||.|+++|+|+.+...
T Consensus 62 ~~~~~~~~~~~g~i~~~~~~p~~----~~~p~vv~~HGgg~~~g~~~--~~~~~~~~la~~~g~~V~~~dyr~~p~~~-- 133 (326)
T 3ga7_A 62 TTRTCAVPTPYGDVTTRLYSPQP----TSQATLYYLHGGGFILGNLD--THDRIMRLLARYTGCTVIGIDYSLSPQAR-- 133 (326)
T ss_dssp EEEEEEECCTTSCEEEEEEESSS----SCSCEEEEECCSTTTSCCTT--TTHHHHHHHHHHHCSEEEEECCCCTTTSC--
T ss_pred ceEEEEeecCCCCeEEEEEeCCC----CCCcEEEEECCCCcccCChh--hhHHHHHHHHHHcCCEEEEeeCCCCCCCC--
Confidence 45778999999999999999976 34599999999875556554 36678888887 79999999999876543
Q ss_pred CCCccchHHHHHHHHHHHHHhC-----CCCcEEEEEechhHHHHHHHHHhcCCcC----CccEEEEEccC
Q psy15208 83 YDSGNGETDDMEILLRYIQKKY-----PYLPIILAGFSFGTFVQAKLQKRLDKEI----SIKILILISVA 143 (1027)
Q Consensus 83 ~~~~~~~~~Dv~avl~~L~~~~-----~~~pviLVGhSmGG~vAl~~A~~~p~~~----~V~gLVli~p~ 143 (1027)
+....+|+.++++++.... +..+++|+||||||.+++.++.++++.. .++++++++|.
T Consensus 134 ---~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~ 200 (326)
T 3ga7_A 134 ---YPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGL 200 (326)
T ss_dssp ---TTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCC
T ss_pred ---CCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccc
Confidence 2346799999999998752 3357999999999999999999877521 28899998875
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.55 E-value=2.8e-14 Score=153.38 Aligned_cols=141 Identities=12% Similarity=0.103 Sum_probs=110.0
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHH----HhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCC
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVM----LSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPY 106 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~L----a~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~ 106 (1027)
++.|+|||+||+++..++.....|..+++.| ++.||.|+++|+|+.+.+. ......|+.+.++++...++.
T Consensus 39 ~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~-----~~~~~~d~~~~~~~l~~~~~~ 113 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEIT-----NPRNLYDAVSNITRLVKEKGL 113 (273)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSC-----TTHHHHHHHHHHHHHHHHHTC
T ss_pred CCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCC-----CCcHHHHHHHHHHHHHHhCCc
Confidence 4688999999976544333334578889988 6789999999999876543 234688999999999887777
Q ss_pred CcEEEEEechhHHHHHHHHHhc-----------------CCcCCccEEEEEccCCCc-----------------------
Q psy15208 107 LPIILAGFSFGTFVQAKLQKRL-----------------DKEISIKILILISVAVKK----------------------- 146 (1027)
Q Consensus 107 ~pviLVGhSmGG~vAl~~A~~~-----------------p~~~~V~gLVli~p~~~~----------------------- 146 (1027)
.+++|+||||||.+++.++.++ |+ +++++|++++....
T Consensus 114 ~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~--~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (273)
T 1vkh_A 114 TNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQ--IVKRVFLLDGIYSLKELLIEYPEYDCFTRLAFPDGIQ 191 (273)
T ss_dssp CCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHT--TEEEEEEESCCCCHHHHHHHCGGGHHHHHHHCTTCGG
T ss_pred CcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCc--ccceeeeecccccHHHhhhhcccHHHHHHHHhccccc
Confidence 7899999999999999999986 55 69999999875321
Q ss_pred -CC-------------CCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 147 -WL-------------IPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 147 -~~-------------l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
|. ...+.+|++++||++|.++|++.+..+.+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~ 237 (273)
T 1vkh_A 192 MYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISC 237 (273)
T ss_dssp GCCCCHHHHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHH
T ss_pred chhhcccccChhhhhcccccCCCEEEEecCCcCCCChHHHHHHHHH
Confidence 00 001568999999999999999988776654
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.55 E-value=4.6e-14 Score=142.46 Aligned_cols=128 Identities=13% Similarity=0.046 Sum_probs=96.3
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCc---EEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGY---ISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy---~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
+|+|||+||++ ++.. .|..+++.|.++|| +|+++|+||+|.|... +.....+++..+++ ..+..++
T Consensus 3 ~~~vv~~HG~~---~~~~--~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~~--~~~~~~~~~~~~~~----~~~~~~~ 71 (181)
T 1isp_A 3 HNPVVMVHGIG---GASF--NFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYN--NGPVLSRFVQKVLD----ETGAKKV 71 (181)
T ss_dssp CCCEEEECCTT---CCGG--GGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHH--HHHHHHHHHHHHHH----HHCCSCE
T ss_pred CCeEEEECCcC---CCHh--HHHHHHHHHHHcCCCCccEEEEecCCCCCchhh--hHHHHHHHHHHHHH----HcCCCeE
Confidence 57789999974 3332 47789999999998 6999999999987641 22233344443333 3355689
Q ss_pred EEEEechhHHHHHHHHHhc--CCcCCccEEEEEccCCCcCC-------CCCCCCcEEEEEeCCCCCCChHHHH
Q psy15208 110 ILAGFSFGTFVQAKLQKRL--DKEISIKILILISVAVKKWL-------IPEVPKNTIIIHGELDEIIPLKDVF 173 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~--p~~~~V~gLVli~p~~~~~~-------l~~i~~PvLiIhG~~D~iVP~~~~~ 173 (1027)
+|+||||||.+++.++.++ |+ +++++|+++++..... .....+|++++||++|.++|++.+.
T Consensus 72 ~lvG~S~Gg~~a~~~~~~~~~~~--~v~~~v~~~~~~~~~~~~~~~~~~~~~~~p~l~i~G~~D~~v~~~~~~ 142 (181)
T 1isp_A 72 DIVAHSMGGANTLYYIKNLDGGN--KVANVVTLGGANRLTTGKALPGTDPNQKILYTSIYSSADMIVMNYLSR 142 (181)
T ss_dssp EEEEETHHHHHHHHHHHHSSGGG--TEEEEEEESCCGGGTCSBCCCCSCTTCCCEEEEEEETTCSSSCHHHHC
T ss_pred EEEEECccHHHHHHHHHhcCCCc--eEEEEEEEcCcccccccccCCCCCCccCCcEEEEecCCCccccccccc
Confidence 9999999999999999988 66 7999999998754211 1124689999999999999998653
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.1e-14 Score=157.27 Aligned_cols=122 Identities=17% Similarity=0.225 Sum_probs=87.6
Q ss_pred CCCceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q psy15208 1 MISNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS 80 (1027)
Q Consensus 1 M~m~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~ 80 (1027)
|+...+...+...+.++++.... ..|+|||+||++. +. ..|+.+.+.|++ +|+|+++|+||||.|.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~g--------~g~~~vllHG~~~---~~--~~w~~~~~~l~~-~~~vi~~Dl~G~G~s~ 66 (291)
T 3qyj_A 1 MFTNFEQTIVDTTEARINLVKAG--------HGAPLLLLHGYPQ---TH--VMWHKIAPLLAN-NFTVVATDLRGYGDSS 66 (291)
T ss_dssp CCTTCEEEEEECSSCEEEEEEEC--------CSSEEEEECCTTC---CG--GGGTTTHHHHTT-TSEEEEECCTTSTTSC
T ss_pred CCCCcceeEEecCCeEEEEEEcC--------CCCeEEEECCCCC---CH--HHHHHHHHHHhC-CCEEEEEcCCCCCCCC
Confidence 33344445666666677775432 2356899999854 22 246778888864 8999999999999998
Q ss_pred CCCC-------CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 81 GTYD-------SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 81 g~~~-------~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
.... +...+++|+.++++.+ +..+++|+||||||.+++.+|.++|+ +++++|++++
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~l~GhS~Gg~ia~~~a~~~p~--~v~~lvl~~~ 129 (291)
T 3qyj_A 67 RPASVPHHINYSKRVMAQDQVEVMSKL----GYEQFYVVGHDRGARVAHRLALDHPH--RVKKLALLDI 129 (291)
T ss_dssp CCCCCGGGGGGSHHHHHHHHHHHHHHT----TCSSEEEEEETHHHHHHHHHHHHCTT--TEEEEEEESC
T ss_pred CCCCCccccccCHHHHHHHHHHHHHHc----CCCCEEEEEEChHHHHHHHHHHhCch--hccEEEEECC
Confidence 6432 1223455555554433 44589999999999999999999999 8999999864
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.1e-14 Score=159.68 Aligned_cols=104 Identities=20% Similarity=0.189 Sum_probs=85.2
Q ss_pred CccEEEEECCCCCCCCCCChHHHH----------------HHHHHHHhCCcEEEEEcCCCCCCCCCCCC---------Cc
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQ----------------TLVRVMLSLGYISIRMNFRGVGASSGTYD---------SG 86 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~----------------~la~~La~~Gy~Vla~DlrGhG~S~g~~~---------~~ 86 (1027)
..|+|||+||++. +.. .|. .+++.|+++||+|+++|+||||.|..... +.
T Consensus 49 ~~~~vv~~hG~~~---~~~--~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~ 123 (354)
T 2rau_A 49 GNDAVLILPGTWS---SGE--QLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGW 123 (354)
T ss_dssp CEEEEEEECCTTC---CHH--HHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGGTTCSH
T ss_pred CCCEEEEECCCCC---Ccc--ccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccccCCcH
Confidence 4688999999743 221 233 68899999999999999999999975321 23
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhc-CCcCCccEEEEEcc
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRL-DKEISIKILILISV 142 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~-p~~~~V~gLVli~p 142 (1027)
...+.|+.++++++....+..+++++||||||.+++.++.++ |+ +++++|++++
T Consensus 124 ~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~--~v~~lvl~~~ 178 (354)
T 2rau_A 124 STWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKN--DIKGLILLDG 178 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHH--HEEEEEEESC
T ss_pred HHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCcc--ccceEEEecc
Confidence 567889999999988776767899999999999999999998 88 7999999964
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.53 E-value=1.8e-14 Score=175.59 Aligned_cols=172 Identities=15% Similarity=0.112 Sum_probs=126.3
Q ss_pred eEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC---
Q psy15208 5 TKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG--- 81 (1027)
Q Consensus 5 ~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g--- 81 (1027)
.+.+.+++.+|+++++++.|++....++.|+||++||++..........+......|+++||.|+++|+||+|.+..
T Consensus 468 ~~~~~~~~~~g~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~ 547 (723)
T 1xfd_A 468 VEYRDIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLL 547 (723)
T ss_dssp CCBCCEEETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHH
T ss_pred ceEEEEEcCCceEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHHH
Confidence 44567788888999999999763223568999999997653211111112235566777899999999999998531
Q ss_pred --CCC-CccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhc----CCcCCccEEEEEccCCCc------
Q psy15208 82 --TYD-SGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRL----DKEISIKILILISVAVKK------ 146 (1027)
Q Consensus 82 --~~~-~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~----p~~~~V~gLVli~p~~~~------ 146 (1027)
... .......|+.++++++.... +..+++|+||||||.+++.++.++ |+ +++++|+.+|....
T Consensus 548 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~--~~~~~v~~~~~~~~~~~~~~ 625 (723)
T 1xfd_A 548 HEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQ--TFTCGSALSPITDFKLYASA 625 (723)
T ss_dssp HTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCC--CCSEEEEESCCCCTTSSBHH
T ss_pred HHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCC--eEEEEEEccCCcchHHhhhh
Confidence 111 12246889999999987653 234799999999999999999999 88 79999999884320
Q ss_pred ---------C-------------CCCCCC-CcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 147 ---------W-------------LIPEVP-KNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 147 ---------~-------------~l~~i~-~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
+ .+..++ +|+|++||++|..+|++.+..+++.
T Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~ 680 (723)
T 1xfd_A 626 FSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQ 680 (723)
T ss_dssp HHHHHHCCCSSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHH
T ss_pred ccHhhcCCccCChhHHHhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHH
Confidence 0 134566 7999999999999999988766553
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.53 E-value=3.2e-14 Score=154.63 Aligned_cols=103 Identities=15% Similarity=0.097 Sum_probs=78.2
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhC--CcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCc
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL--GYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLP 108 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~--Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~p 108 (1027)
+.+++|||+||++ ++.. .|..+++.|+++ ||+|+++|+||||.|.... .....|+...+..+.... ..+
T Consensus 34 ~~~~~vvllHG~~---~~~~--~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~---~~~~~~~~~~l~~~~~~~-~~~ 104 (302)
T 1pja_A 34 ASYKPVIVVHGLF---DSSY--SFRHLLEYINETHPGTVVTVLDLFDGRESLRPL---WEQVQGFREAVVPIMAKA-PQG 104 (302)
T ss_dssp -CCCCEEEECCTT---CCGG--GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCH---HHHHHHHHHHHHHHHHHC-TTC
T ss_pred CCCCeEEEECCCC---CChh--HHHHHHHHHHhcCCCcEEEEeccCCCccchhhH---HHHHHHHHHHHHHHhhcC-CCc
Confidence 3567889999974 3332 488899999998 9999999999999987542 123444444444444444 468
Q ss_pred EEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 109 IILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 109 viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
++|+||||||.+++.++.++|+. +++++|+++++
T Consensus 105 ~~lvGhS~Gg~ia~~~a~~~p~~-~v~~lvl~~~~ 138 (302)
T 1pja_A 105 VHLICYSQGGLVCRALLSVMDDH-NVDSFISLSSP 138 (302)
T ss_dssp EEEEEETHHHHHHHHHHHHCTTC-CEEEEEEESCC
T ss_pred EEEEEECHHHHHHHHHHHhcCcc-ccCEEEEECCC
Confidence 99999999999999999999872 49999999864
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.3e-13 Score=153.53 Aligned_cols=134 Identities=16% Similarity=0.122 Sum_probs=102.6
Q ss_pred eEEEEEecCCceEEEEEEecCCc-cccCCccEEEEECCCCCCCCCCChHHHHHHHHHHH-hCCcEEEEEcCCCCCCCCCC
Q psy15208 5 TKFFNINGSVGILHCAINFPSSI-KLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVML-SLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 5 ~~~i~I~t~dG~I~~~l~~P~~~-~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La-~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
.+++.+.. ...+.+.+|.|++. ...++.|+|||+||+++..++.....|..++..|+ +.||.|+++|+||++.+..
T Consensus 55 ~~~v~~~~-~~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~- 132 (338)
T 2o7r_A 55 TKDLALNP-LHNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRL- 132 (338)
T ss_dssp EEEEEEET-TTTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTCT-
T ss_pred EEEEEecC-CCCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCCC-
Confidence 45666665 33678888888752 12256799999999876666655556788899998 6799999999999876542
Q ss_pred CCCccchHHHHHHHHHHHHHhC--------CCCcEEEEEechhHHHHHHHHHhcCC--c----CCccEEEEEccCC
Q psy15208 83 YDSGNGETDDMEILLRYIQKKY--------PYLPIILAGFSFGTFVQAKLQKRLDK--E----ISIKILILISVAV 144 (1027)
Q Consensus 83 ~~~~~~~~~Dv~avl~~L~~~~--------~~~pviLVGhSmGG~vAl~~A~~~p~--~----~~V~gLVli~p~~ 144 (1027)
....+|+.++++++.... +..+++|+||||||.+++.+|.++|+ . .+++++|+++|..
T Consensus 133 ----~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~ 204 (338)
T 2o7r_A 133 ----PAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGF 204 (338)
T ss_dssp ----THHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCC
T ss_pred ----chHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCcc
Confidence 346889999999998652 22579999999999999999999875 1 2589999998753
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.53 E-value=9.5e-14 Score=153.79 Aligned_cols=131 Identities=18% Similarity=0.165 Sum_probs=102.7
Q ss_pred ceEEEEEecCCc--eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCC
Q psy15208 4 NTKFFNINGSVG--ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASS 80 (1027)
Q Consensus 4 ~~~~i~I~t~dG--~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~ 80 (1027)
..+.+.+.+.+| .+.+++|.|++. ..+.|+|||+||+++..++.. .|..++..|++ .||.|+++|+||+|.+.
T Consensus 50 ~~~~~~i~~~~g~~~l~~~~~~P~~~--~~~~p~vv~~HGgg~~~g~~~--~~~~~~~~la~~~G~~Vv~~d~rg~~~~~ 125 (323)
T 1lzl_A 50 SLRELSAPGLDGDPEVKIRFVTPDNT--AGPVPVLLWIHGGGFAIGTAE--SSDPFCVEVARELGFAVANVEYRLAPETT 125 (323)
T ss_dssp EEEEEEECCSTTCCCEEEEEEEESSC--CSCEEEEEEECCSTTTSCCGG--GGHHHHHHHHHHHCCEEEEECCCCTTTSC
T ss_pred eEEEEEecCCCCCceeEEEEEecCCC--CCCCcEEEEECCCccccCChh--hhHHHHHHHHHhcCcEEEEecCCCCCCCC
Confidence 456788889888 799999999742 246789999999876555544 36678888887 49999999999999876
Q ss_pred CCCCCccchHHHHHHHHHHHHHh---CC--CCcEEEEEechhHHHHHHHHHhcCCc--CCccEEEEEccC
Q psy15208 81 GTYDSGNGETDDMEILLRYIQKK---YP--YLPIILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVA 143 (1027)
Q Consensus 81 g~~~~~~~~~~Dv~avl~~L~~~---~~--~~pviLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~ 143 (1027)
.. ....|+.++++++... ++ ..+++|+||||||.+++.++.++++. ..++++++++|.
T Consensus 126 ~~-----~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~ 190 (323)
T 1lzl_A 126 FP-----GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPE 190 (323)
T ss_dssp TT-----HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCC
T ss_pred CC-----chHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCc
Confidence 32 3578888888888763 22 24799999999999999999887652 248999999975
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.53 E-value=3.3e-14 Score=147.73 Aligned_cols=150 Identities=13% Similarity=-0.007 Sum_probs=108.9
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCC---CCCC--------CC
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGA---SSGT--------YD 84 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~---S~g~--------~~ 84 (1027)
.+++.++.|.. ..+|+|||+||++. +.. .|..+++.|++ ||.|+++|.|++.. +... ..
T Consensus 17 ~l~~~~~~~~~----~~~p~vv~lHG~g~---~~~--~~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~ 86 (223)
T 3b5e_A 17 AFPYRLLGAGK----ESRECLFLLHGSGV---DET--TLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQK 86 (223)
T ss_dssp SSCEEEESTTS----SCCCEEEEECCTTB---CTT--TTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHH
T ss_pred CceEEEeCCCC----CCCCEEEEEecCCC---CHH--HHHHHHHhcCC-CceEEEeCCCCCcCCccccccccCCCcccHH
Confidence 56666655543 34689999999743 332 36678888876 99999999887421 1100 00
Q ss_pred CccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC---CCCCCCCcEEEE
Q psy15208 85 SGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---LIPEVPKNTIII 159 (1027)
Q Consensus 85 ~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---~l~~i~~PvLiI 159 (1027)
.......++.++++++...+ +..+++|+||||||.+++.++.++|+ +++++|++++..... ......+|++++
T Consensus 87 ~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~P~li~ 164 (223)
T 3b5e_A 87 SILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPG--IVRLAALLRPMPVLDHVPATDLAGIRTLII 164 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTT--SCSEEEEESCCCCCSSCCCCCCTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCcc--ccceEEEecCccCccccccccccCCCEEEE
Confidence 11234566677777776654 33579999999999999999999998 799999999875432 234567999999
Q ss_pred EeCCCCCCChHHHHhhhCC
Q psy15208 160 HGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 160 hG~~D~iVP~~~~~~l~~~ 178 (1027)
||++|.++|++.+. +.+.
T Consensus 165 ~G~~D~~v~~~~~~-~~~~ 182 (223)
T 3b5e_A 165 AGAADETYGPFVPA-LVTL 182 (223)
T ss_dssp EETTCTTTGGGHHH-HHHH
T ss_pred eCCCCCcCCHHHHH-HHHH
Confidence 99999999998887 6553
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.53 E-value=5.5e-14 Score=142.55 Aligned_cols=141 Identities=18% Similarity=0.157 Sum_probs=99.6
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHH-HHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLV-RVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la-~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
.|+|||+||++. +... .|..+. ..|+++||.|+++|+| .|.. ++...+++|+..+++.+ ..+++|
T Consensus 4 ~p~vv~~HG~~~---~~~~-~~~~~~~~~l~~~g~~v~~~d~~---~~~~--~~~~~~~~~~~~~~~~~-----~~~~~l 69 (192)
T 1uxo_A 4 TKQVYIIHGYRA---SSTN-HWFPWLKKRLLADGVQADILNMP---NPLQ--PRLEDWLDTLSLYQHTL-----HENTYL 69 (192)
T ss_dssp CCEEEEECCTTC---CTTS-TTHHHHHHHHHHTTCEEEEECCS---CTTS--CCHHHHHHHHHTTGGGC-----CTTEEE
T ss_pred CCEEEEEcCCCC---Ccch-hHHHHHHHHHHhCCcEEEEecCC---CCCC--CCHHHHHHHHHHHHHhc-----cCCEEE
Confidence 577999999854 2221 244444 5788889999999999 2222 24444555555544433 358999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc---------CC--------CCCCCCcEEEEEeCCCCCCChHHHHh
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK---------WL--------IPEVPKNTIIIHGELDEIIPLKDVFL 174 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~---------~~--------l~~i~~PvLiIhG~~D~iVP~~~~~~ 174 (1027)
+||||||.+++.++.++|+..+++++|+++|.... +. +..+.+|++++||++|.++|++.+..
T Consensus 70 ~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 149 (192)
T 1uxo_A 70 VAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQMLDEFTQGSFDHQKIIESAKHRAVIASKDDQIVPFSFSKD 149 (192)
T ss_dssp EEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGGGGGGTCSCCCHHHHHHHEEEEEEEEETTCSSSCHHHHHH
T ss_pred EEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccchhhhhhhhcCCCHHHHHhhcCCEEEEecCCCCcCCHHHHHH
Confidence 99999999999999999873358999999986541 11 12345799999999999999999888
Q ss_pred hhCCCCCceEeec
Q psy15208 175 WANPLDIPVVVIP 187 (1027)
Q Consensus 175 l~~~~~~~~L~t~ 187 (1027)
+.+.++......+
T Consensus 150 ~~~~~~~~~~~~~ 162 (192)
T 1uxo_A 150 LAQQIDAALYEVQ 162 (192)
T ss_dssp HHHHTTCEEEEET
T ss_pred HHHhcCceEEEeC
Confidence 7776543343333
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.52 E-value=2.4e-13 Score=164.31 Aligned_cols=171 Identities=16% Similarity=0.139 Sum_probs=128.4
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCcc----ccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCC---
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIK----LLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRG--- 75 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~----~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrG--- 75 (1027)
..+.+.+.+.+| +++++++.|++.. ..++.|+||++||++..... ..|..+++.|+++||.|+++|+||
T Consensus 390 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~---~~~~~~~~~l~~~G~~v~~~d~rG~~~ 466 (662)
T 3azo_A 390 EPQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVP---AVLDLDVAYFTSRGIGVADVNYGGSTG 466 (662)
T ss_dssp CCEEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCC---CSCCHHHHHHHTTTCEEEEEECTTCSS
T ss_pred cceEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCc---ccchHHHHHHHhCCCEEEEECCCCCCC
Confidence 356677888777 8999999987521 12467999999998543221 135578889999999999999999
Q ss_pred CCCCCCC--CCC-ccchHHHHHHHHHHHHHh--CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc----
Q psy15208 76 VGASSGT--YDS-GNGETDDMEILLRYIQKK--YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK---- 146 (1027)
Q Consensus 76 hG~S~g~--~~~-~~~~~~Dv~avl~~L~~~--~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~---- 146 (1027)
||.+... ... ......|+.+.++++..+ .+..+++|+||||||.+++.++.+ |+ +++++|+.+|....
T Consensus 467 ~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~--~~~~~v~~~~~~~~~~~~ 543 (662)
T 3azo_A 467 YGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TD--VYACGTVLYPVLDLLGWA 543 (662)
T ss_dssp SCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CC--CCSEEEEESCCCCHHHHH
T ss_pred ccHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cC--ceEEEEecCCccCHHHHh
Confidence 6665321 111 124588999999999887 344589999999999999998886 77 79999999875320
Q ss_pred --------------------------------CCCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 147 --------------------------------WLIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 147 --------------------------------~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
..+..+.+|+|++||++|.++|++++..+++.++
T Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~ 609 (662)
T 3azo_A 544 DGGTHDFESRYLDFLIGSFEEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVA 609 (662)
T ss_dssp TTCSCGGGTTHHHHHTCCTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHT
T ss_pred cccccchhhHhHHHHhCCCccchhHHHhhChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHH
Confidence 0134567999999999999999999887766543
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.51 E-value=2e-13 Score=150.58 Aligned_cols=121 Identities=15% Similarity=0.178 Sum_probs=87.5
Q ss_pred EEEEEecCC--ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCC
Q psy15208 6 KFFNINGSV--GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 6 ~~i~I~t~d--G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~ 82 (1027)
+.+.+...+ ++++++...+ ..|+|||+||++. +. ..|..+++.|++ .+|+|+++|+||||.|+..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~g~-------~~p~lvllHG~~~---~~--~~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~ 83 (316)
T 3c5v_A 16 EDVEVENETGKDTFRVYKSGS-------EGPVLLLLHGGGH---SA--LSWAVFTAAIISRVQCRIVALDLRSHGETKVK 83 (316)
T ss_dssp EEEEEEETTEEEEEEEEEECS-------SSCEEEEECCTTC---CG--GGGHHHHHHHHTTBCCEEEEECCTTSTTCBCS
T ss_pred ceEEecCCcceEEEEEEecCC-------CCcEEEEECCCCc---cc--ccHHHHHHHHhhcCCeEEEEecCCCCCCCCCC
Confidence 445555433 3555544321 2467999999742 22 247889999976 2899999999999999753
Q ss_pred C---CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhc--CCcCCccEEEEEcc
Q psy15208 83 Y---DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRL--DKEISIKILILISV 142 (1027)
Q Consensus 83 ~---~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~--p~~~~V~gLVli~p 142 (1027)
. .+...+++|+.++++.+....+ .+++|+||||||.+|+.+|.++ |+ ++++|++++
T Consensus 84 ~~~~~~~~~~a~dl~~~l~~l~~~~~-~~~~lvGhSmGG~ia~~~A~~~~~p~---v~~lvl~~~ 144 (316)
T 3c5v_A 84 NPEDLSAETMAKDVGNVVEAMYGDLP-PPIMLIGHSMGGAIAVHTASSNLVPS---LLGLCMIDV 144 (316)
T ss_dssp CTTCCCHHHHHHHHHHHHHHHHTTCC-CCEEEEEETHHHHHHHHHHHTTCCTT---EEEEEEESC
T ss_pred CccccCHHHHHHHHHHHHHHHhccCC-CCeEEEEECHHHHHHHHHHhhccCCC---cceEEEEcc
Confidence 2 2456788999999888853221 4799999999999999999963 43 899999864
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.7e-13 Score=155.94 Aligned_cols=171 Identities=12% Similarity=0.109 Sum_probs=126.5
Q ss_pred EEEEEecC-Cc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHH-----HHHH--HHHHHhCCcEEEEEcCCCC
Q psy15208 6 KFFNINGS-VG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKV-----VQTL--VRVMLSLGYISIRMNFRGV 76 (1027)
Q Consensus 6 ~~i~I~t~-dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~-----~~~l--a~~La~~Gy~Vla~DlrGh 76 (1027)
+.+.+.+. +| ++.+.+|.|++....++.|+||++||+++.+....... +..+ .......++.|+++|+||.
T Consensus 145 ~~~~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~ 224 (380)
T 3doh_A 145 LAFTFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPN 224 (380)
T ss_dssp EEEEEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTT
T ss_pred cceeeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCC
Confidence 45667777 77 89999999986322356799999999865432211100 0011 2233456889999999987
Q ss_pred CCCCCCCC------CccchHHHHHHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC
Q psy15208 77 GASSGTYD------SGNGETDDMEILLRYIQKKYPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL 148 (1027)
Q Consensus 77 G~S~g~~~------~~~~~~~Dv~avl~~L~~~~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~ 148 (1027)
+.....+. .......|+.++++++...++.+ +++|+||||||.+++.++.++|+ .+++++++++......
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~--~~~~~v~~sg~~~~~~ 302 (380)
T 3doh_A 225 SSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPE--LFAAAIPICGGGDVSK 302 (380)
T ss_dssp CCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTT--TCSEEEEESCCCCGGG
T ss_pred CcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCc--cceEEEEecCCCChhh
Confidence 76543221 12456788888999888887654 69999999999999999999998 7999999999876655
Q ss_pred CCCCC-CcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 149 IPEVP-KNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 149 l~~i~-~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
+..+. +|++++||+.|.++|++.+..+.+.
T Consensus 303 ~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~ 333 (380)
T 3doh_A 303 VERIKDIPIWVFHAEDDPVVPVENSRVLVKK 333 (380)
T ss_dssp GGGGTTSCEEEEEETTCSSSCTHHHHHHHHH
T ss_pred hhhccCCCEEEEecCCCCccCHHHHHHHHHH
Confidence 55665 8999999999999999888766553
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.51 E-value=6.3e-14 Score=171.29 Aligned_cols=171 Identities=13% Similarity=0.099 Sum_probs=126.8
Q ss_pred ceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHH-HHHHHHH-hCCcEEEEEcCCCCCCCCC
Q psy15208 4 NTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQ-TLVRVML-SLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~-~la~~La-~~Gy~Vla~DlrGhG~S~g 81 (1027)
..+.+.+++.+.++++.++.|++....++.|+||++||++........ |. .++..|+ ++||.|+++|+||+|.|..
T Consensus 467 ~~~~~~~~~~~~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~--~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~ 544 (719)
T 1z68_A 467 KEEIKKLEVDEITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSV--FAVNWISYLASKEGMVIALVDGRGTAFQGD 544 (719)
T ss_dssp EEEEEEEEETTEEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCC--CCCCHHHHHHHTTCCEEEEEECTTBSSSCH
T ss_pred ceEEEEEecCCeEEEEEEEeCCCCCCCCCccEEEEECCCCCcCccccc--chhhHHHHHHhcCCeEEEEEcCCCCCCCch
Confidence 346678888777899999999763223567899999998653321111 11 3455554 6899999999999999874
Q ss_pred CC-----CC-ccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-------
Q psy15208 82 TY-----DS-GNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK------- 146 (1027)
Q Consensus 82 ~~-----~~-~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~------- 146 (1027)
.+ .. ......|+.++++++..... ..+++++||||||.+++.++.++|+ +++++|+++|....
T Consensus 545 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v~~~~~~~~~~~~~~~ 622 (719)
T 1z68_A 545 KLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTG--LFKCGIAVAPVSSWEYYASVY 622 (719)
T ss_dssp HHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSS--CCSEEEEESCCCCTTTSBHHH
T ss_pred hhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCC--ceEEEEEcCCccChHHhcccc
Confidence 21 11 12468899999999987532 3479999999999999999999998 79999999885321
Q ss_pred ----------C-------------CCCCCCC-cEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 147 ----------W-------------LIPEVPK-NTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 147 ----------~-------------~l~~i~~-PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
+ .+..+.+ |+|++||++|..+|++.+..+++.
T Consensus 623 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~ 678 (719)
T 1z68_A 623 TERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKA 678 (719)
T ss_dssp HHHHHCCSSTTTTHHHHHHTCSGGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHH
T ss_pred chhhcCCcccccchhhhhhCCHhHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHH
Confidence 0 1234566 899999999999999988766653
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.3e-13 Score=140.39 Aligned_cols=139 Identities=12% Similarity=0.085 Sum_probs=98.4
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCC-CcE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL-GYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPY-LPI 109 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~-Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~-~pv 109 (1027)
++|+|||+||++........ ++..+++.|+++ ||+|+++|+||++. .....++..+++.+ .. .++
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~-~~~~~~~~l~~~~g~~vi~~d~~g~~~--------~~~~~~~~~~~~~l----~~~~~~ 69 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHG-WYGWVKKELEKIPGFQCLAKNMPDPIT--------ARESIWLPFMETEL----HCDEKT 69 (194)
T ss_dssp CCCEEEEECCSSSSCTTTST-THHHHHHHHTTSTTCCEEECCCSSTTT--------CCHHHHHHHHHHTS----CCCTTE
T ss_pred CCCEEEEECCCCCCCcccch-HHHHHHHHHhhccCceEEEeeCCCCCc--------ccHHHHHHHHHHHh----CcCCCE
Confidence 46889999998532100111 233378889887 99999999998642 12455555555433 33 589
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC----------C--------CCCCCCcEEEEEeCCCCCCChHH
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW----------L--------IPEVPKNTIIIHGELDEIIPLKD 171 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~----------~--------l~~i~~PvLiIhG~~D~iVP~~~ 171 (1027)
+|+||||||.+++.++.++| ++++|+++|..... . +.....|++++||++|.++|++.
T Consensus 70 ~lvG~S~Gg~ia~~~a~~~p----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lii~G~~D~~vp~~~ 145 (194)
T 2qs9_A 70 IIIGHSSGAIAAMRYAETHR----VYAIVLVSAYTSDLGDENERASGYFTRPWQWEKIKANCPYIVQFGSTDDPFLPWKE 145 (194)
T ss_dssp EEEEETHHHHHHHHHHHHSC----CSEEEEESCCSSCTTCHHHHHTSTTSSCCCHHHHHHHCSEEEEEEETTCSSSCHHH
T ss_pred EEEEcCcHHHHHHHHHHhCC----CCEEEEEcCCccccchhhhHHHhhhcccccHHHHHhhCCCEEEEEeCCCCcCCHHH
Confidence 99999999999999999986 89999999865421 1 11235699999999999999999
Q ss_pred HHhhhCCCCCceEeec
Q psy15208 172 VFLWANPLDIPVVVIP 187 (1027)
Q Consensus 172 ~~~l~~~~~~~~L~t~ 187 (1027)
+..+.+.+.......+
T Consensus 146 ~~~~~~~~~~~~~~~~ 161 (194)
T 2qs9_A 146 QQEVADRLETKLHKFT 161 (194)
T ss_dssp HHHHHHHHTCEEEEES
T ss_pred HHHHHHhcCCeEEEeC
Confidence 8877665533333333
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.25 E-value=1.4e-15 Score=162.52 Aligned_cols=98 Identities=18% Similarity=0.238 Sum_probs=79.1
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-------CCccchHHHHHHHHHHHHHhCC
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY-------DSGNGETDDMEILLRYIQKKYP 105 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~-------~~~~~~~~Dv~avl~~L~~~~~ 105 (1027)
.|+|||+||++. +.. .|..+++.|+ +||+|+++|+||||.|.... .+....++|+.++++.+..
T Consensus 25 ~p~vv~lHG~~~---~~~--~~~~~~~~l~-~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~--- 95 (304)
T 3b12_A 25 GPALLLLHGFPQ---NLH--MWARVAPLLA-NEYTVVCADLRGYGGSSKPVGAPDHANYSFRAMASDQRELMRTLGF--- 95 (304)
Confidence 467999999743 222 4778889998 69999999999999998641 2345667788777777643
Q ss_pred CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 106 YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 106 ~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
.+++|+||||||.+++.+|.++|+ +++++|++++
T Consensus 96 -~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~ 129 (304)
T 3b12_A 96 -ERFHLVGHARGGRTGHRMALDHPD--SVLSLAVLDI 129 (304)
Confidence 379999999999999999999998 7899998875
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.50 E-value=2.4e-13 Score=150.17 Aligned_cols=129 Identities=16% Similarity=0.101 Sum_probs=100.7
Q ss_pred ceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHH-hCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVML-SLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La-~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
..+.+.+++++|.+.+++| +.. .+.|+|||+||+++..|+.. .|..+++.|+ +.||.|+++|+||+|.|...
T Consensus 55 ~~~~~~i~~~~g~i~~~~y-~~~----~~~p~vv~~HGgg~~~g~~~--~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p 127 (311)
T 1jji_A 55 RVEDRTIKGRNGDIRVRVY-QQK----PDSPVLVYYHGGGFVICSIE--SHDALCRRIARLSNSTVVSVDYRLAPEHKFP 127 (311)
T ss_dssp EEEEEEEEETTEEEEEEEE-ESS----SSEEEEEEECCSTTTSCCTG--GGHHHHHHHHHHHTSEEEEEECCCTTTSCTT
T ss_pred eEEEEEecCCCCcEEEEEE-cCC----CCceEEEEECCcccccCChh--HhHHHHHHHHHHhCCEEEEecCCCCCCCCCC
Confidence 3567888898998888888 432 46799999999865545554 3677888898 57999999999999998643
Q ss_pred CCCccchHHHHHHHHHHHHHh---CCC--CcEEEEEechhHHHHHHHHHhcCCc--CCccEEEEEccCC
Q psy15208 83 YDSGNGETDDMEILLRYIQKK---YPY--LPIILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVAV 144 (1027)
Q Consensus 83 ~~~~~~~~~Dv~avl~~L~~~---~~~--~pviLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~~ 144 (1027)
....|+.++++++... +.. .+++|+||||||.+++.++.++|+. .+++++|+++|..
T Consensus 128 -----~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~ 191 (311)
T 1jji_A 128 -----AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVV 191 (311)
T ss_dssp -----HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCC
T ss_pred -----CcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCcc
Confidence 3567888888888763 222 3799999999999999999887752 2389999999853
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.6e-13 Score=146.75 Aligned_cols=140 Identities=14% Similarity=0.047 Sum_probs=101.8
Q ss_pred EEEEecCCccc-cCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHH
Q psy15208 19 CAINFPSSIKL-LKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILL 97 (1027)
Q Consensus 19 ~~l~~P~~~~~-~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl 97 (1027)
+.+|.|..... ..+.|+|||+||++. +. ..|..+++.|+++||.|+++|+||.+ ...|+..++
T Consensus 34 ~~~~~p~~~~~~g~~~p~vv~~HG~~~---~~--~~~~~~~~~l~~~G~~v~~~d~~~s~-----------~~~~~~~~~ 97 (258)
T 2fx5_A 34 CRIYRPRDLGQGGVRHPVILWGNGTGA---GP--STYAGLLSHWASHGFVVAAAETSNAG-----------TGREMLACL 97 (258)
T ss_dssp EEEEEESSTTGGGCCEEEEEEECCTTC---CG--GGGHHHHHHHHHHTCEEEEECCSCCT-----------TSHHHHHHH
T ss_pred EEEEeCCCCcccCCCceEEEEECCCCC---Cc--hhHHHHHHHHHhCCeEEEEecCCCCc-----------cHHHHHHHH
Confidence 55666764111 126789999999743 32 35788999999999999999999531 123445555
Q ss_pred HHHHHh-----------CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-----CCCCCCCCcEEEEEe
Q psy15208 98 RYIQKK-----------YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-----WLIPEVPKNTIIIHG 161 (1027)
Q Consensus 98 ~~L~~~-----------~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-----~~l~~i~~PvLiIhG 161 (1027)
+++... .+..+++|+||||||.+++.++. ++ +++++++++|.... ..+..+.+|+|++||
T Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~--~~--~v~~~v~~~~~~~~~~~~~~~~~~i~~P~lii~G 173 (258)
T 2fx5_A 98 DYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAGQ--DT--RVRTTAPIQPYTLGLGHDSASQRRQQGPMFLMSG 173 (258)
T ss_dssp HHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHTT--ST--TCCEEEEEEECCSSTTCCGGGGGCCSSCEEEEEE
T ss_pred HHHHhcccccccccccccCccceEEEEEChHHHHHHHhcc--Cc--CeEEEEEecCcccccccchhhhccCCCCEEEEEc
Confidence 555432 12247999999999999999983 34 69999999986552 236678999999999
Q ss_pred CCCCCCChHH-HHhhhCC
Q psy15208 162 ELDEIIPLKD-VFLWANP 178 (1027)
Q Consensus 162 ~~D~iVP~~~-~~~l~~~ 178 (1027)
++|.++|++. ...+.+.
T Consensus 174 ~~D~~~~~~~~~~~~~~~ 191 (258)
T 2fx5_A 174 GGDTIAFPYLNAQPVYRR 191 (258)
T ss_dssp TTCSSSCHHHHTHHHHHH
T ss_pred CCCcccCchhhHHHHHhc
Confidence 9999999986 6655544
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.48 E-value=3e-14 Score=149.83 Aligned_cols=140 Identities=16% Similarity=0.108 Sum_probs=100.1
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-C---Cccch----HHHHHHHHHHHHH
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY-D---SGNGE----TDDMEILLRYIQK 102 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~-~---~~~~~----~~Dv~avl~~L~~ 102 (1027)
+++++|||+||++ ++. ..|..+++.|...|+.|++||.+|++.-+... . ..... ...+..+++.+..
T Consensus 20 ~a~~~Vv~lHG~G---~~~--~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 94 (210)
T 4h0c_A 20 RAKKAVVMLHGRG---GTA--ADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIEA 94 (210)
T ss_dssp TCSEEEEEECCTT---CCH--HHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEeCCC---CCH--HHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 5688999999974 332 24677888888889999999999887432111 0 11112 2334444444443
Q ss_pred h-CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-------CCCCCCCcEEEEEeCCCCCCChHHHHh
Q psy15208 103 K-YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW-------LIPEVPKNTIIIHGELDEIIPLKDVFL 174 (1027)
Q Consensus 103 ~-~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~-------~l~~i~~PvLiIhG~~D~iVP~~~~~~ 174 (1027)
. .+..+++|+|+||||.+++.++.++|+ ++++++.+++..... ....-..|++++||++|++||++.++.
T Consensus 95 ~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~--~~~~vv~~sg~l~~~~~~~~~~~~~~~~~Pvl~~hG~~D~~vp~~~~~~ 172 (210)
T 4h0c_A 95 QGIPAEQIYFAGFSQGACLTLEYTTRNAR--KYGGIIAFTGGLIGQELAIGNYKGDFKQTPVFISTGNPDPHVPVSRVQE 172 (210)
T ss_dssp TTCCGGGEEEEEETHHHHHHHHHHHHTBS--CCSEEEEETCCCCSSSCCGGGCCBCCTTCEEEEEEEESCTTSCHHHHHH
T ss_pred hCCChhhEEEEEcCCCcchHHHHHHhCcc--cCCEEEEecCCCCChhhhhhhhhhhccCCceEEEecCCCCccCHHHHHH
Confidence 2 244579999999999999999999998 799999998764322 122235799999999999999998876
Q ss_pred hhC
Q psy15208 175 WAN 177 (1027)
Q Consensus 175 l~~ 177 (1027)
+.+
T Consensus 173 ~~~ 175 (210)
T 4h0c_A 173 SVT 175 (210)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.48 E-value=3.4e-13 Score=141.08 Aligned_cols=141 Identities=13% Similarity=0.053 Sum_probs=99.5
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhC-----CcEEEEEcCCCCCCCC-----------------CCCC---C
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL-----GYISIRMNFRGVGASS-----------------GTYD---S 85 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~-----Gy~Vla~DlrGhG~S~-----------------g~~~---~ 85 (1027)
+++|+|||+||++ ++. ..|..+++.|..+ ||.|+++|.|+++.+. .... .
T Consensus 21 ~~~p~vv~lHG~g---~~~--~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 95 (239)
T 3u0v_A 21 RHSASLIFLHGSG---DSG--QGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLES 95 (239)
T ss_dssp CCCEEEEEECCTT---CCH--HHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHH
T ss_pred CCCcEEEEEecCC---Cch--hhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhh
Confidence 5689999999973 332 3477888888775 6999999987542111 0000 1
Q ss_pred ccchHHHHHHHHHHHHHh-CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC-------CCCCCCc-E
Q psy15208 86 GNGETDDMEILLRYIQKK-YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL-------IPEVPKN-T 156 (1027)
Q Consensus 86 ~~~~~~Dv~avl~~L~~~-~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~-------l~~i~~P-v 156 (1027)
.....+++..+++..... .+..+++|+||||||.+++.++.++|+ +++++|++++...... ......| +
T Consensus 96 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pp~ 173 (239)
T 3u0v_A 96 IDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQ--DVAGVFALSSFLNKASAVYQALQKSNGVLPEL 173 (239)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCT--TSSEEEEESCCCCTTCHHHHHHHHCCSCCCCE
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCcc--ccceEEEecCCCCchhHHHHHHHhhccCCCCE
Confidence 122344455555544322 244689999999999999999999998 7999999998765332 2445667 9
Q ss_pred EEEEeCCCCCCChHHHHhhhCC
Q psy15208 157 IIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 157 LiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
+++||++|.++|++.+..+.+.
T Consensus 174 li~~G~~D~~v~~~~~~~~~~~ 195 (239)
T 3u0v_A 174 FQCHGTADELVLHSWAEETNSM 195 (239)
T ss_dssp EEEEETTCSSSCHHHHHHHHHH
T ss_pred EEEeeCCCCccCHHHHHHHHHH
Confidence 9999999999999887765543
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.48 E-value=6.4e-13 Score=147.62 Aligned_cols=132 Identities=14% Similarity=0.109 Sum_probs=103.2
Q ss_pred CceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCC
Q psy15208 3 SNTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASS 80 (1027)
Q Consensus 3 m~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~ 80 (1027)
+..+.+.+.+++| .+.+++|.|.+ ++.|+||++||+++..|+... +..++..|+. .||.|+++|+|+.+...
T Consensus 58 ~~~~~~~i~~~~G~~i~~~~~~P~~----~~~p~vv~~HGgG~~~g~~~~--~~~~~~~la~~~g~~vv~~dyr~~p~~~ 131 (317)
T 3qh4_A 58 VAVADDVVTGEAGRPVPVRIYRAAP----TPAPVVVYCHAGGFALGNLDT--DHRQCLELARRARCAVVSVDYRLAPEHP 131 (317)
T ss_dssp CEEEEEEEECTTSCEEEEEEEECSC----SSEEEEEEECCSTTTSCCTTT--THHHHHHHHHHHTSEEEEECCCCTTTSC
T ss_pred ceEEEEEecCCCCCeEEEEEEecCC----CCCcEEEEECCCcCccCChHH--HHHHHHHHHHHcCCEEEEecCCCCCCCC
Confidence 3456788999999 89999999975 468999999998766566543 5667777774 59999999999776543
Q ss_pred CCCCCccchHHHHHHHHHHHHHh---C--CCCcEEEEEechhHHHHHHHHHhcCCc--CCccEEEEEccCCC
Q psy15208 81 GTYDSGNGETDDMEILLRYIQKK---Y--PYLPIILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVAVK 145 (1027)
Q Consensus 81 g~~~~~~~~~~Dv~avl~~L~~~---~--~~~pviLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~~~ 145 (1027)
+....+|+.++++|+... + +..+++|+||||||.+++.++.+++++ ..++++++++|...
T Consensus 132 -----~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~ 198 (317)
T 3qh4_A 132 -----YPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLD 198 (317)
T ss_dssp -----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCC
T ss_pred -----CchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceec
Confidence 234688999999998874 2 234799999999999999999886652 24899999998643
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.48 E-value=1.3e-12 Score=140.21 Aligned_cols=157 Identities=15% Similarity=0.077 Sum_probs=109.4
Q ss_pred eEEEEEec-CCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHH---HHHHHHhCCcEEEEEcCCCCCCC
Q psy15208 5 TKFFNING-SVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQT---LVRVMLSLGYISIRMNFRGVGAS 79 (1027)
Q Consensus 5 ~~~i~I~t-~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~---la~~La~~Gy~Vla~DlrGhG~S 79 (1027)
.+.+.+.+ ..| .+.+.++.|++.. .++.|+||++||++. +.. .|.. +.+.+.+.||.|+++|+||||.|
T Consensus 15 ~~~~~~~s~~~g~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~---~~~--~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s 88 (278)
T 3e4d_A 15 QGVFSHQSETLKSEMTFAVYVPPKAI-HEPCPVVWYLSGLTC---THA--NVMEKGEYRRMASELGLVVVCPDTSPRGND 88 (278)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGGG-TSCEEEEEEECCTTC---CSH--HHHHHSCCHHHHHHHTCEEEECCSSCCSTT
T ss_pred EEEEEEeccccCCcceEEEEcCCCCC-CCCCCEEEEEcCCCC---Ccc--chhhcccHHHHHhhCCeEEEecCCcccCcc
Confidence 34455543 334 7888999997632 357899999999743 322 2433 45556666999999999999988
Q ss_pred CCCC-------------CC--------ccchHHHH-HHHHHHHHHhCCC--CcEEEEEechhHHHHHHHHHhcCCcCCcc
Q psy15208 80 SGTY-------------DS--------GNGETDDM-EILLRYIQKKYPY--LPIILAGFSFGTFVQAKLQKRLDKEISIK 135 (1027)
Q Consensus 80 ~g~~-------------~~--------~~~~~~Dv-~avl~~L~~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~ 135 (1027)
.... .. .......+ ..+.+++...++. .+++|+||||||.+++.++.++|+ .++
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~--~~~ 166 (278)
T 3e4d_A 89 VPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPE--RFK 166 (278)
T ss_dssp SCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTT--TCS
T ss_pred cccccccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCc--ccc
Confidence 5321 00 00122232 3567777776655 679999999999999999999998 799
Q ss_pred EEEEEccCCCcC---------------------------CCC--CCCCcEEEEEeCCCCCCCh
Q psy15208 136 ILILISVAVKKW---------------------------LIP--EVPKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 136 gLVli~p~~~~~---------------------------~l~--~i~~PvLiIhG~~D~iVP~ 169 (1027)
++++++|..... .+. ....|++++||++|.++|.
T Consensus 167 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~ 229 (278)
T 3e4d_A 167 SCSAFAPIVAPSSADWSEPALEKYLGADRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEK 229 (278)
T ss_dssp CEEEESCCSCGGGCTTTHHHHHHHHCSCGGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHHH
T ss_pred eEEEeCCcccccCCccchhhHHHhcCCcHHHHHhcChhhHhhcCCCCCcEEEEecCCCccccc
Confidence 999999854311 011 1346999999999999986
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=7.2e-14 Score=161.99 Aligned_cols=117 Identities=13% Similarity=0.114 Sum_probs=81.3
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHH---HHHhCCcEEEEEcCCC--CCCCCCC--------
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVR---VMLSLGYISIRMNFRG--VGASSGT-------- 82 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~---~La~~Gy~Vla~DlrG--hG~S~g~-------- 82 (1027)
++++..+.+.+ ....|+|||+||++...... .+|..++. .|.+.||+|+++|+|| ||.|...
T Consensus 95 ~l~y~~~G~~~---~~~~p~vvllHG~~~~~~~~--~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~ 169 (444)
T 2vat_A 95 PVAYKSWGRMN---VSRDNCVIVCHTLTSSAHVT--SWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEG 169 (444)
T ss_dssp EEEEEEESCCC---TTSCCEEEEECCTTCCSCGG--GTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC-
T ss_pred eEEEEEecCCC---CCCCCeEEEECCCCcccchh--hHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCccccc
Confidence 35555555433 12357899999985432220 12445553 4656799999999999 6887531
Q ss_pred ---C------CCccchHHHHHHHHHHHHHhCCCCc-EEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 83 ---Y------DSGNGETDDMEILLRYIQKKYPYLP-IILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 83 ---~------~~~~~~~~Dv~avl~~L~~~~~~~p-viLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+ .+...+++|+.++++.+. ..+ ++|+||||||.+++.+|.++|+ +++++|++++.
T Consensus 170 ~~~~~~~f~~~t~~~~a~dl~~ll~~l~----~~~~~~lvGhSmGG~ial~~A~~~p~--~v~~lVli~~~ 234 (444)
T 2vat_A 170 QRPYGAKFPRTTIRDDVRIHRQVLDRLG----VRQIAAVVGASMGGMHTLEWAFFGPE--YVRKIVPIATS 234 (444)
T ss_dssp -CBCGGGCCCCCHHHHHHHHHHHHHHHT----CCCEEEEEEETHHHHHHHHHGGGCTT--TBCCEEEESCC
T ss_pred ccccccccccccHHHHHHHHHHHHHhcC----CccceEEEEECHHHHHHHHHHHhChH--hhheEEEEecc
Confidence 1 134456666666666553 346 9999999999999999999998 79999999864
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=2.2e-12 Score=146.66 Aligned_cols=135 Identities=18% Similarity=0.180 Sum_probs=103.3
Q ss_pred ceEEEEEecCCceEEEEEEe-cCCc--------------------cccCCccEEEEECCCCCCCCCCChHHHHHHHHHHH
Q psy15208 4 NTKFFNINGSVGILHCAINF-PSSI--------------------KLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVML 62 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~-P~~~--------------------~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La 62 (1027)
..+.+.+.+.+| +.+.+|. |... ...++.|+||++||+++..++.....|..+++.|+
T Consensus 63 ~~~dv~~~~~~g-l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la 141 (365)
T 3ebl_A 63 SSFDHIIDQSVG-LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFV 141 (365)
T ss_dssp EEEEEEEETTTT-EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHHHHHH
T ss_pred ceeeEEecCCCC-ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHHHHHH
Confidence 456788888888 8888887 8642 12246799999999877666666556788889998
Q ss_pred hC-CcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHh------CCCC-cEEEEEechhHHHHHHHHHhcCCc-CC
Q psy15208 63 SL-GYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKK------YPYL-PIILAGFSFGTFVQAKLQKRLDKE-IS 133 (1027)
Q Consensus 63 ~~-Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~------~~~~-pviLVGhSmGG~vAl~~A~~~p~~-~~ 133 (1027)
++ ||.|+++|+|+.+... +....+|+.++++|+... .+.. +++|+||||||.+|+.++.+.++. .+
T Consensus 142 ~~~g~~Vv~~dyR~~p~~~-----~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~~~ 216 (365)
T 3ebl_A 142 KLSKGVVVSVNYRRAPEHR-----YPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEGVK 216 (365)
T ss_dssp HHHTSEEEEECCCCTTTSC-----TTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHHTTCC
T ss_pred HHCCCEEEEeeCCCCCCCC-----CcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHhcCCc
Confidence 86 9999999999765332 335789999999999853 2334 799999999999999999876542 25
Q ss_pred ccEEEEEccCC
Q psy15208 134 IKILILISVAV 144 (1027)
Q Consensus 134 V~gLVli~p~~ 144 (1027)
++++|+++|..
T Consensus 217 ~~g~vl~~p~~ 227 (365)
T 3ebl_A 217 VCGNILLNAMF 227 (365)
T ss_dssp CCEEEEESCCC
T ss_pred eeeEEEEcccc
Confidence 89999999864
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.47 E-value=4.6e-13 Score=164.19 Aligned_cols=170 Identities=11% Similarity=0.069 Sum_probs=127.0
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
..+.+.+.+.+| +++++++.|++....++.|+||++||++..... ..|......|+++||.|+.+|+||+|.+...
T Consensus 416 ~~~~~~~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~---~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~ 492 (695)
T 2bkl_A 416 QVEQVFYASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNME---ANFRSSILPWLDAGGVYAVANLRGGGEYGKA 492 (695)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCC---CCCCGGGHHHHHTTCEEEEECCTTSSTTCHH
T ss_pred eEEEEEEECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccC---CCcCHHHHHHHhCCCEEEEEecCCCCCcCHH
Confidence 456788888888 899999998753223578999999996432221 1233344567788999999999999887532
Q ss_pred C------CCccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc--------
Q psy15208 83 Y------DSGNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-------- 146 (1027)
Q Consensus 83 ~------~~~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-------- 146 (1027)
+ ........|+.++++++..+.. ..+++++||||||.+++.++.++|+ +++++|+.+|....
T Consensus 493 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~--~~~~~v~~~~~~d~~~~~~~~~ 570 (695)
T 2bkl_A 493 WHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPE--LYGAVVCAVPLLDMVRYHLFGS 570 (695)
T ss_dssp HHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGG--GCSEEEEESCCCCTTTGGGSTT
T ss_pred HHHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCc--ceEEEEEcCCccchhhccccCC
Confidence 1 1223467999999999987642 3479999999999999999999998 78999999885321
Q ss_pred ---C-----------------------CCCCCC--CcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 147 ---W-----------------------LIPEVP--KNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 147 ---~-----------------------~l~~i~--~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
| .+..+. .|+|++||++|..+|+.++..+++.
T Consensus 571 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~ 630 (695)
T 2bkl_A 571 GRTWIPEYGTAEKPEDFKTLHAYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAA 630 (695)
T ss_dssp GGGGHHHHCCTTSHHHHHHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHH
T ss_pred CcchHHHhCCCCCHHHHHHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHH
Confidence 0 122333 6999999999999999998877654
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.46 E-value=5.4e-13 Score=164.77 Aligned_cols=170 Identities=15% Similarity=0.101 Sum_probs=122.8
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHH-hCCcEEEEEcCCCCCCCCCC
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVML-SLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La-~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
.+.+.+ ..+| .++++++.|++....++.|+||++||++........ +...+...|+ ++||.|+++|+||+|.+...
T Consensus 474 ~~~~~~-~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~-~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~ 551 (740)
T 4a5s_A 474 KKLDFI-ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTV-FRLNWATYLASTENIIVASFDGRGSGYQGDK 551 (740)
T ss_dssp EEEEEE-EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCC-CCCSHHHHHHHTTCCEEEEECCTTCSSSCHH
T ss_pred cEEEEE-ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccc-cCcCHHHHHHhcCCeEEEEEcCCCCCcCChh
Confidence 344556 5566 799999999863334568999999997543211111 0112445565 48999999999999977532
Q ss_pred C------CCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc--------
Q psy15208 83 Y------DSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-------- 146 (1027)
Q Consensus 83 ~------~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-------- 146 (1027)
+ ........|+.++++++.... +..+++|+||||||.+++.++.++|+ .++++|+.+|....
T Consensus 552 ~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~--~~~~~v~~~p~~~~~~~~~~~~ 629 (740)
T 4a5s_A 552 IMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSG--VFKCGIAVAPVSRWEYYDSVYT 629 (740)
T ss_dssp HHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCS--CCSEEEEESCCCCGGGSBHHHH
T ss_pred HHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCC--ceeEEEEcCCccchHHhhhHHH
Confidence 1 112246899999999998542 12579999999999999999999998 78999999986321
Q ss_pred ---------C-------------CCCCCCC-cEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 147 ---------W-------------LIPEVPK-NTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 147 ---------~-------------~l~~i~~-PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
. .+..++. |+|++||+.|..+|++++..+++.
T Consensus 630 ~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~ 684 (740)
T 4a5s_A 630 ERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKA 684 (740)
T ss_dssp HHHHCCSSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHH
T ss_pred HHHcCCCCccccHHHHHhCCHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHH
Confidence 0 1334555 999999999999999988766554
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=6.4e-13 Score=163.19 Aligned_cols=170 Identities=15% Similarity=0.126 Sum_probs=126.9
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~g 81 (1027)
..+++.+.+.+| +++++++.|++....++.|+||++||++..... ..|......|++ +||.|+++|+||+|.+..
T Consensus 436 ~~~~~~~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~---~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~ 512 (710)
T 2xdw_A 436 QTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISIT---PNYSVSRLIFVRHMGGVLAVANIRGGGEYGE 512 (710)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCC---CCCCHHHHHHHHHHCCEEEEECCTTSSTTHH
T ss_pred EEEEEEEEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCC---CcccHHHHHHHHhCCcEEEEEccCCCCCCCh
Confidence 456788998888 799999998763223568999999997533221 123333445666 899999999999998743
Q ss_pred CC------CCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-------
Q psy15208 82 TY------DSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK------- 146 (1027)
Q Consensus 82 ~~------~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~------- 146 (1027)
.+ ........|+.++++++..+. ...+++++||||||.+++.++.++|+ +++++|+.+|....
T Consensus 513 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~--~~~~~v~~~~~~d~~~~~~~~ 590 (710)
T 2xdw_A 513 TWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPD--LFGCVIAQVGVMDMLKFHKYT 590 (710)
T ss_dssp HHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGG--GCSEEEEESCCCCTTTGGGST
T ss_pred HHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCcc--ceeEEEEcCCcccHhhccccC
Confidence 11 112345789999999998763 23479999999999999999999998 79999999875321
Q ss_pred ----C-----------------------CCC-----CCCC-cEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 147 ----W-----------------------LIP-----EVPK-NTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 147 ----~-----------------------~l~-----~i~~-PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
| .+. .+.. |+|++||++|..+|+.++..+++.
T Consensus 591 ~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~ 655 (710)
T 2xdw_A 591 IGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIAT 655 (710)
T ss_dssp TGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHH
T ss_pred CChhHHHhCCCCCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHH
Confidence 1 133 5665 999999999999999988766554
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.5e-12 Score=160.36 Aligned_cols=171 Identities=13% Similarity=0.031 Sum_probs=129.4
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHH-HHHHHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQ-TLVRVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~-~la~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
..+++.+++.+| +++++++.|++....++.|+||++||++...... .|. .+.+.|+++||.|+.+|+||+|.+..
T Consensus 448 ~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~---~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~ 524 (711)
T 4hvt_A 448 VLEQKEATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAP---YFSRIKNEVWVKNAGVSVLANIRGGGEFGP 524 (711)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCC---CCCHHHHHHTGGGTCEEEEECCTTSSTTCH
T ss_pred eeEEEEEECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCC---cccHHHHHHHHHCCCEEEEEeCCCCCCcch
Confidence 456788999999 7999999998633346789999999975432222 122 23357888999999999999998753
Q ss_pred CC------CCccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC--------
Q psy15208 82 TY------DSGNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK-------- 145 (1027)
Q Consensus 82 ~~------~~~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~-------- 145 (1027)
.+ .......+|+.++++++..+.. ..+++++|+|+||.+++.++.++|+ +++++|+.+|...
T Consensus 525 ~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd--~f~a~V~~~pv~D~~~~~~~~ 602 (711)
T 4hvt_A 525 EWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPE--LFGAVACEVPILDMIRYKEFG 602 (711)
T ss_dssp HHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGG--GCSEEEEESCCCCTTTGGGST
T ss_pred hHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcC--ceEEEEEeCCccchhhhhccc
Confidence 21 1223567899999999987632 2469999999999999999999998 7899999887432
Q ss_pred ---cC-----------------------CCCCCCC--cEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 146 ---KW-----------------------LIPEVPK--NTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 146 ---~~-----------------------~l~~i~~--PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
.| .+..+.+ |+|++||++|..||+.++..+++.+
T Consensus 603 ~~~~~~~~~G~p~~~~~~~~l~~~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL 664 (711)
T 4hvt_A 603 AGHSWVTEYGDPEIPNDLLHIKKYAPLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVL 664 (711)
T ss_dssp TGGGGHHHHCCTTSHHHHHHHHHHCGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHH
T ss_pred cchHHHHHhCCCcCHHHHHHHHHcCHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHH
Confidence 11 1344555 9999999999999999987666554
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=8.4e-13 Score=162.20 Aligned_cols=170 Identities=15% Similarity=0.155 Sum_probs=129.6
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
..+++++.+.+| +++++++.|++....++.|+||++||+...... ..|......|+++||.|+.+|+||+|.+...
T Consensus 424 ~~~~~~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~---~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~ 500 (693)
T 3iuj_A 424 VSEQRFYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLT---PSFSVSVANWLDLGGVYAVANLRGGGEYGQA 500 (693)
T ss_dssp EEEEEEEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCC---CCCCHHHHHHHHTTCEEEEECCTTSSTTCHH
T ss_pred eeEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCC---CccCHHHHHHHHCCCEEEEEeCCCCCccCHH
Confidence 456788998888 799999999753223578999999997432221 2344556778889999999999999976532
Q ss_pred C------CCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc--------
Q psy15208 83 Y------DSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-------- 146 (1027)
Q Consensus 83 ~------~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-------- 146 (1027)
+ .......+|+.+++++|..+. ...+++++||||||.+++.++.++|+ +++++|+.+|....
T Consensus 501 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~--~~~a~v~~~~~~d~~~~~~~~~ 578 (693)
T 3iuj_A 501 WHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPD--LMRVALPAVGVLDMLRYHTFTA 578 (693)
T ss_dssp HHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTT--SCSEEEEESCCCCTTTGGGSGG
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCcc--ceeEEEecCCcchhhhhccCCC
Confidence 1 112345789999999998763 23479999999999999999999999 78999999876421
Q ss_pred ---C------------------------CCCC-CCCc-EEEEEeCCCCCCChHHHHhhhCC
Q psy15208 147 ---W------------------------LIPE-VPKN-TIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 147 ---~------------------------~l~~-i~~P-vLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
| .+.. +..| +|++||++|..||+.++..+++.
T Consensus 579 ~~~~~~~~g~p~~~~~~~~~~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~ 639 (693)
T 3iuj_A 579 GTGWAYDYGTSADSEAMFDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAAT 639 (693)
T ss_dssp GGGCHHHHCCTTSCHHHHHHHHHHCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHH
T ss_pred chhHHHHcCCccCHHHHHHHHHhcCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHH
Confidence 1 0334 6776 99999999999999998877654
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.3e-12 Score=145.29 Aligned_cols=117 Identities=9% Similarity=-0.041 Sum_probs=90.0
Q ss_pred EEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCccchHHHHHH
Q psy15208 17 LHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASSGTYDSGNGETDDMEI 95 (1027)
Q Consensus 17 I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~a 95 (1027)
+.++++.|.+ .+.|+|||+||+++..++. ..|..++..|+. .||.|+++|+||.+.. ......+|+..
T Consensus 84 ~~~~~~~p~~----~~~p~vv~lHGgg~~~~~~--~~~~~~~~~la~~~g~~vi~~D~r~~~~~-----~~~~~~~d~~~ 152 (326)
T 3d7r_A 84 MQVFRFNFRH----QIDKKILYIHGGFNALQPS--PFHWRLLDKITLSTLYEVVLPIYPKTPEF-----HIDDTFQAIQR 152 (326)
T ss_dssp EEEEEEESTT----CCSSEEEEECCSTTTSCCC--HHHHHHHHHHHHHHCSEEEEECCCCTTTS-----CHHHHHHHHHH
T ss_pred EEEEEEeeCC----CCCeEEEEECCCcccCCCC--HHHHHHHHHHHHHhCCEEEEEeCCCCCCC-----CchHHHHHHHH
Confidence 5666677764 3578999999976544443 356778888874 5999999999986543 23346788888
Q ss_pred HHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCc--CCccEEEEEccCC
Q psy15208 96 LLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVAV 144 (1027)
Q Consensus 96 vl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~~ 144 (1027)
.++++....+..+++|+||||||.+|+.++.++|+. ..++++|+++|..
T Consensus 153 ~~~~l~~~~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~ 203 (326)
T 3d7r_A 153 VYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPIL 203 (326)
T ss_dssp HHHHHHHHHCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCC
T ss_pred HHHHHHhccCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECccc
Confidence 888887776666899999999999999999988762 2389999999853
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.6e-13 Score=148.95 Aligned_cols=99 Identities=16% Similarity=0.158 Sum_probs=81.0
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
.|+|||+||++. +. ..|..+++.|++ +|+|+++|+||||.|+... .+...+++|+.++++.+. ..+++
T Consensus 27 ~p~vvllHG~~~---~~--~~w~~~~~~L~~-~~rvia~DlrGhG~S~~~~~~~~~~~~a~dl~~ll~~l~----~~~~~ 96 (276)
T 2wj6_A 27 GPAILLLPGWCH---DH--RVYKYLIQELDA-DFRVIVPNWRGHGLSPSEVPDFGYQEQVKDALEILDQLG----VETFL 96 (276)
T ss_dssp SCEEEEECCTTC---CG--GGGHHHHHHHTT-TSCEEEECCTTCSSSCCCCCCCCHHHHHHHHHHHHHHHT----CCSEE
T ss_pred CCeEEEECCCCC---cH--HHHHHHHHHHhc-CCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCceE
Confidence 477999999853 32 247889999975 7999999999999998542 245567888888887764 34899
Q ss_pred EEEechhHHHHHHHHHhc-CCcCCccEEEEEccC
Q psy15208 111 LAGFSFGTFVQAKLQKRL-DKEISIKILILISVA 143 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~-p~~~~V~gLVli~p~ 143 (1027)
|+||||||.+++.+|.++ |+ +++++|++++.
T Consensus 97 lvGhSmGG~va~~~A~~~~P~--rv~~lvl~~~~ 128 (276)
T 2wj6_A 97 PVSHSHGGWVLVELLEQAGPE--RAPRGIIMDWL 128 (276)
T ss_dssp EEEEGGGHHHHHHHHHHHHHH--HSCCEEEESCC
T ss_pred EEEECHHHHHHHHHHHHhCHH--hhceEEEeccc
Confidence 999999999999999999 99 79999999864
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.44 E-value=2.1e-12 Score=138.92 Aligned_cols=158 Identities=16% Similarity=0.151 Sum_probs=109.4
Q ss_pred EEEEEec-CCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHH---HHHHHHhCCcEEEEEcCCCCCCCC
Q psy15208 6 KFFNING-SVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQT---LVRVMLSLGYISIRMNFRGVGASS 80 (1027)
Q Consensus 6 ~~i~I~t-~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~---la~~La~~Gy~Vla~DlrGhG~S~ 80 (1027)
+.+.+.+ ..| .+.+.+|.|++....++.|+||++||++. +..+ |.. +.+.+++.|+.|+++|.+++|.+.
T Consensus 18 ~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~---~~~~--~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~ 92 (280)
T 3i6y_A 18 KQYSHVSNTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTC---SDEN--FMQKAGAQRLAAELGIAIVAPDTSPRGEGV 92 (280)
T ss_dssp EEEEEEETTTTEEEEEEEEECGGGGTTCCEEEEEEECCTTC---CSSH--HHHHSCCHHHHHHHTCEEEEECSSCCSTTC
T ss_pred EEEEEeccccCCeeEEEEEeCCCCCCCCCccEEEEecCCCC---ChhH--HhhcccHHHHHhhCCeEEEEeCCccccccc
Confidence 3455554 333 78889999976332357899999999753 3222 332 556677779999999999887643
Q ss_pred CC------------CCCc--------cchHHHH-HHHHHHHHHhCCC-CcEEEEEechhHHHHHHHHHhcCCcCCccEEE
Q psy15208 81 GT------------YDSG--------NGETDDM-EILLRYIQKKYPY-LPIILAGFSFGTFVQAKLQKRLDKEISIKILI 138 (1027)
Q Consensus 81 g~------------~~~~--------~~~~~Dv-~avl~~L~~~~~~-~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLV 138 (1027)
.. +... ......+ ..+.+++...++. .+++|+||||||.+++.++.++|+ ++++++
T Consensus 93 ~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v 170 (280)
T 3i6y_A 93 ADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNPE--RYQSVS 170 (280)
T ss_dssp CCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHCTT--TCSCEE
T ss_pred CcccccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhCCc--cccEEE
Confidence 21 1000 0122222 4566667666665 689999999999999999999998 799999
Q ss_pred EEccCCCcC---------------------------CCCCC--CCcEEEEEeCCCCCCChH
Q psy15208 139 LISVAVKKW---------------------------LIPEV--PKNTIIIHGELDEIIPLK 170 (1027)
Q Consensus 139 li~p~~~~~---------------------------~l~~i--~~PvLiIhG~~D~iVP~~ 170 (1027)
+++|..... .+..+ ..|++++||++|.++|.+
T Consensus 171 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~ 231 (280)
T 3i6y_A 171 AFSPINNPVNCPWGQKAFTAYLGKDTDTWREYDASLLMRAAKQYVPALVDQGEADNFLAEQ 231 (280)
T ss_dssp EESCCCCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHHHH
T ss_pred EeCCccccccCchHHHHHHHhcCCchHHHHhcCHHHHHHhcCCCccEEEEEeCCCccccch
Confidence 999854311 01222 479999999999999974
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-12 Score=162.17 Aligned_cols=168 Identities=12% Similarity=0.058 Sum_probs=126.8
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
..+++.+.+.+| +++++++.|++. .++.|+||++||++..... ..|......|+++||.|+++|+||+|.+...
T Consensus 460 ~~~~~~~~~~dg~~i~~~~~~p~~~--~~~~p~vl~~hGg~~~~~~---~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~ 534 (741)
T 1yr2_A 460 RVEQVFYPSKDGTKVPMFIVRRKDA--KGPLPTLLYGYGGFNVALT---PWFSAGFMTWIDSGGAFALANLRGGGEYGDA 534 (741)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTC--CSCCCEEEECCCCTTCCCC---CCCCHHHHHHHTTTCEEEEECCTTSSTTHHH
T ss_pred EEEEEEEEcCCCCEEEEEEEecCCC--CCCCcEEEEECCCCCccCC---CCcCHHHHHHHHCCcEEEEEecCCCCCCCHH
Confidence 456788888888 899999998752 2468999999997543221 1244455678889999999999999987422
Q ss_pred C------CCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc--------
Q psy15208 83 Y------DSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-------- 146 (1027)
Q Consensus 83 ~------~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-------- 146 (1027)
+ ........|+.++++++..+. ...+++++||||||.+++.++.++|+ +++++|+.+|....
T Consensus 535 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~--~~~~~v~~~~~~d~~~~~~~~~ 612 (741)
T 1yr2_A 535 WHDAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPD--LFAAASPAVGVMDMLRFDQFTA 612 (741)
T ss_dssp HHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGG--GCSEEEEESCCCCTTSGGGSTT
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCch--hheEEEecCCccccccccCCCC
Confidence 1 111245789999999998763 33579999999999999999999998 79999998875320
Q ss_pred ---C-----------------------CCCC-CC-CcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 147 ---W-----------------------LIPE-VP-KNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 147 ---~-----------------------~l~~-i~-~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
| .+.. +. .|+|++||++|..+|+.++..+++.
T Consensus 613 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~ 672 (741)
T 1yr2_A 613 GRYWVDDYGYPEKEADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAA 672 (741)
T ss_dssp GGGGHHHHCCTTSHHHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHH
T ss_pred CchhHHHcCCCCCHHHHHHHHHcCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHH
Confidence 0 1233 55 3999999999999999998876654
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.43 E-value=3.3e-12 Score=138.43 Aligned_cols=119 Identities=15% Similarity=0.181 Sum_probs=88.7
Q ss_pred ecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchH
Q psy15208 11 NGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGET 90 (1027)
Q Consensus 11 ~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~ 90 (1027)
...+| +...+|.|.+ .+.|+|||+||+++..|+.+. .+..+.+.|++.||.|+++|+|+.... .+...+
T Consensus 10 ~~~~~-~~~~~y~p~~----~~~p~iv~~HGGg~~~g~~~~-~~~~~~~~l~~~g~~Vi~vdYrlaPe~-----~~p~~~ 78 (274)
T 2qru_A 10 TLANG-ATVTIYPTTT----EPTNYVVYLHGGGMIYGTKSD-LPEELKELFTSNGYTVLALDYLLAPNT-----KIDHIL 78 (274)
T ss_dssp ECTTS-CEEEEECCSS----SSCEEEEEECCSTTTSCCGGG-CCHHHHHHHHTTTEEEEEECCCCTTTS-----CHHHHH
T ss_pred cccCC-eeEEEEcCCC----CCCcEEEEEeCccccCCChhh-chHHHHHHHHHCCCEEEEeCCCCCCCC-----CCcHHH
Confidence 33344 3445677753 357899999998876666543 224567778888999999999986532 445679
Q ss_pred HHHHHHHHHHHHhCC-CCcEEEEEechhHHHHHHHHHh---cCCcCCccEEEEEcc
Q psy15208 91 DDMEILLRYIQKKYP-YLPIILAGFSFGTFVQAKLQKR---LDKEISIKILILISV 142 (1027)
Q Consensus 91 ~Dv~avl~~L~~~~~-~~pviLVGhSmGG~vAl~~A~~---~p~~~~V~gLVli~p 142 (1027)
+|+.++++|+..... ..+++|+|+|+||.+|+.++.+ .+. +++++++++|
T Consensus 79 ~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~--~~~~~vl~~~ 132 (274)
T 2qru_A 79 RTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNL--TPQFLVNFYG 132 (274)
T ss_dssp HHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTC--CCSCEEEESC
T ss_pred HHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCC--CceEEEEEcc
Confidence 999999999987654 5689999999999999999873 454 6788887654
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=8.3e-12 Score=134.03 Aligned_cols=163 Identities=16% Similarity=0.137 Sum_probs=114.0
Q ss_pred eEEEEEecC-Cc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCCh--HHHHHHHHHHHhC----CcEEEEEcCCCC
Q psy15208 5 TKFFNINGS-VG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDN--KVVQTLVRVMLSL----GYISIRMNFRGV 76 (1027)
Q Consensus 5 ~~~i~I~t~-dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~--~~~~~la~~La~~----Gy~Vla~DlrGh 76 (1027)
.+.+.+.+. .| .+.+.+|.|++....++.|+||++||++.....+.. ..+..+++.|+++ ||.|+.+|++++
T Consensus 32 ~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~ 111 (268)
T 1jjf_A 32 VVNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAA 111 (268)
T ss_dssp EEEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCC
T ss_pred EEEEEEeccccCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCC
Confidence 445566543 33 788889999763223578999999998644333321 1245568888876 499999999998
Q ss_pred CCCCCCCCCccchHHH-HHHHHHHHHHhCCC----CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC---
Q psy15208 77 GASSGTYDSGNGETDD-MEILLRYIQKKYPY----LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL--- 148 (1027)
Q Consensus 77 G~S~g~~~~~~~~~~D-v~avl~~L~~~~~~----~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~--- 148 (1027)
+.+.. ..+.....+ +..+++++...++. .+++|+||||||.+++.++.++|+ .++++++++|......
T Consensus 112 ~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v~~s~~~~~~~~~~ 187 (268)
T 1jjf_A 112 GPGIA--DGYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLD--KFAYIGPISAAPNTYPNER 187 (268)
T ss_dssp CTTCS--CHHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTT--TCSEEEEESCCTTSCCHHH
T ss_pred Ccccc--ccHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCch--hhhheEEeCCCCCCCchhh
Confidence 76432 122223334 56677778776653 579999999999999999999998 7899999998654221
Q ss_pred -CCC------CCC-cEEEEEeCCCCCCChHH
Q psy15208 149 -IPE------VPK-NTIIIHGELDEIIPLKD 171 (1027)
Q Consensus 149 -l~~------i~~-PvLiIhG~~D~iVP~~~ 171 (1027)
+.. ... |++++||++|.++|...
T Consensus 188 ~~~~~~~~~~~~~pp~li~~G~~D~~v~~~~ 218 (268)
T 1jjf_A 188 LFPDGGKAAREKLKLLFIACGTNDSLIGFGQ 218 (268)
T ss_dssp HCTTTTHHHHHHCSEEEEEEETTCTTHHHHH
T ss_pred hcCcchhhhhhcCceEEEEecCCCCCccHHH
Confidence 111 134 49999999999998643
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.43 E-value=3.7e-12 Score=134.97 Aligned_cols=161 Identities=13% Similarity=0.038 Sum_probs=107.0
Q ss_pred CCCceEEEEEecC--CceEEEEEEecCCcc----ccCCccEEEEECCCCCCCCCCChHHHHH--HHHHH-HhCCcEEEEE
Q psy15208 1 MISNTKFFNINGS--VGILHCAINFPSSIK----LLKLKGVVLIAHPHPLFGGTMDNKVVQT--LVRVM-LSLGYISIRM 71 (1027)
Q Consensus 1 M~m~~~~i~I~t~--dG~I~~~l~~P~~~~----~~~~~pvVVllHG~~~~gGs~~~~~~~~--la~~L-a~~Gy~Vla~ 71 (1027)
|.|..+++++.++ +.++.+.+|.|++.. ..++.|+||++||++ ++.. .|.. ....+ .+.|+.|+.+
T Consensus 3 ~~m~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~---~~~~--~~~~~~~~~~~~~~~~~~v~~~ 77 (263)
T 2uz0_A 3 MDPAVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMS---GNHN--SWLKRTNVERLLRGTNLIVVMP 77 (263)
T ss_dssp TCCEEEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTT---CCTT--HHHHHSCHHHHTTTCCCEEEEC
T ss_pred ccceEeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCC---CCHH--HHHhccCHHHHHhcCCeEEEEE
Confidence 5677777777653 337899999997631 125689999999974 3333 2444 34444 4579999999
Q ss_pred cCCCCCCCCCCCCC--ccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC
Q psy15208 72 NFRGVGASSGTYDS--GNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW 147 (1027)
Q Consensus 72 DlrGhG~S~g~~~~--~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~ 147 (1027)
|+++++.+...... .....+|+..+++...... +..+++|+||||||.+++.++. +|+ +++++++++|.....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~--~~~~~v~~~~~~~~~ 154 (263)
T 2uz0_A 78 NTSNGWYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTN--RFSHAASFSGALSFQ 154 (263)
T ss_dssp CCTTSTTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHC--CCSEEEEESCCCCSS
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-Ccc--ccceEEEecCCcchh
Confidence 99988876543211 1223344444444332211 2257999999999999999999 888 799999999874321
Q ss_pred C----------------------------------CCCCC--CcEEEEEeCCCCCCCh
Q psy15208 148 L----------------------------------IPEVP--KNTIIIHGELDEIIPL 169 (1027)
Q Consensus 148 ~----------------------------------l~~i~--~PvLiIhG~~D~iVP~ 169 (1027)
. +..+. +|++++||++|.+++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~ 212 (263)
T 2uz0_A 155 NFSPESQNLGSPAYWRGVFGEIRDWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLYEA 212 (263)
T ss_dssp SCCGGGTTCSCHHHHHHHHCCCSCTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTHHH
T ss_pred hccccccccccchhHHHHcCChhhhccccCCHHHHHHhccCCCeEEEEeCCCchhhHH
Confidence 1 11232 7999999999999864
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.42 E-value=2e-12 Score=138.45 Aligned_cols=149 Identities=14% Similarity=0.124 Sum_probs=102.7
Q ss_pred ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHH---HHHHHhCCcEEEEEcC--CCCCCCCCC-------
Q psy15208 15 GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTL---VRVMLSLGYISIRMNF--RGVGASSGT------- 82 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~l---a~~La~~Gy~Vla~Dl--rGhG~S~g~------- 82 (1027)
..+.+.+|.|++.. .++.|+||++||+++ +.. .|... ++.++++||.|+++|+ ||+|.+...
T Consensus 28 ~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~---~~~--~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~ 101 (282)
T 3fcx_A 28 CKMKFAVYLPPKAE-TGKCPALYWLSGLTC---TEQ--NFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGT 101 (282)
T ss_dssp EEEEEEEEECGGGG-TSCEEEEEEECCTTC---CSH--HHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CCC
T ss_pred CeeEEEEEcCCCCC-CCCCCEEEEEcCCCC---Ccc--chhhcchHHHHhhcCCeEEEEeccccCccccccccccccccC
Confidence 37888999997632 256899999999743 222 24333 6788888999999999 776654311
Q ss_pred ----CCCc---------cchHHHHHHHHHHHHHhCCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-
Q psy15208 83 ----YDSG---------NGETDDMEILLRYIQKKYPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK- 146 (1027)
Q Consensus 83 ----~~~~---------~~~~~Dv~avl~~L~~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~- 146 (1027)
+... .....++..+.+++...++. .+++|+||||||.+|+.++.++|+ .++++++++|....
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v~~s~~~~~~ 179 (282)
T 3fcx_A 102 GAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPG--KYKSVSAFAPICNPV 179 (282)
T ss_dssp CCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTT--TSSCEEEESCCCCGG
T ss_pred CcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcc--cceEEEEeCCccCcc
Confidence 1110 11122344666677666653 469999999999999999999998 78999999986431
Q ss_pred -------------------C----------CCCCCCCcEEEEEeCCCCCCChHH
Q psy15208 147 -------------------W----------LIPEVPKNTIIIHGELDEIIPLKD 171 (1027)
Q Consensus 147 -------------------~----------~l~~i~~PvLiIhG~~D~iVP~~~ 171 (1027)
| .+....+|++++||++|.++|+..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~ 233 (282)
T 3fcx_A 180 LCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQ 233 (282)
T ss_dssp GSHHHHHHHHHHHC---CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHHTTS
T ss_pred cCchhHHHHHHhcCCchhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccccch
Confidence 1 133447999999999999986654
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.42 E-value=2e-12 Score=143.86 Aligned_cols=119 Identities=11% Similarity=0.036 Sum_probs=93.9
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCccchHHHHH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASSGTYDSGNGETDDME 94 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~ 94 (1027)
.+.++++.|++ ..+.|+||++||+++..++.. .+..++..|+. .||.|+++|+|+.+... +....+|+.
T Consensus 66 ~i~~~~~~p~~---~~~~p~vv~~HGGg~~~g~~~--~~~~~~~~la~~~g~~vv~~dyr~~p~~~-----~~~~~~D~~ 135 (322)
T 3fak_A 66 GCAAEWVRAPG---CQAGKAILYLHGGGYVMGSIN--THRSMVGEISRASQAAALLLDYRLAPEHP-----FPAAVEDGV 135 (322)
T ss_dssp TEEEEEEECTT---CCTTCEEEEECCSTTTSCCHH--HHHHHHHHHHHHHTSEEEEECCCCTTTSC-----TTHHHHHHH
T ss_pred CeEEEEEeCCC---CCCccEEEEEcCCccccCChH--HHHHHHHHHHHhcCCEEEEEeCCCCCCCC-----CCcHHHHHH
Confidence 58888888876 256899999999766555433 46677888876 59999999999876543 234689999
Q ss_pred HHHHHHHHh-CCCCcEEEEEechhHHHHHHHHHhcCCc--CCccEEEEEccCC
Q psy15208 95 ILLRYIQKK-YPYLPIILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVAV 144 (1027)
Q Consensus 95 avl~~L~~~-~~~~pviLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~~ 144 (1027)
++++|+... .+..+++|+||||||.+++.++.+.++. ..++++|+++|..
T Consensus 136 ~a~~~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~ 188 (322)
T 3fak_A 136 AAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWA 188 (322)
T ss_dssp HHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCC
T ss_pred HHHHHHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEe
Confidence 999999887 4455799999999999999999887652 2389999999864
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.40 E-value=3.4e-12 Score=129.62 Aligned_cols=137 Identities=15% Similarity=0.139 Sum_probs=98.9
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
++|+|||+||++. +... .|..+...+... ++.+|+||++. .+...+++|+.++++. .+ .+++|
T Consensus 16 ~~~~vv~~HG~~~---~~~~-~~~~~~~~~~~~---~~~v~~~~~~~-----~~~~~~~~~~~~~~~~----~~-~~~~l 78 (191)
T 3bdv_A 16 QQLTMVLVPGLRD---SDDE-HWQSHWERRFPH---WQRIRQREWYQ-----ADLDRWVLAIRRELSV----CT-QPVIL 78 (191)
T ss_dssp TTCEEEEECCTTC---CCTT-SHHHHHHHHCTT---SEECCCSCCSS-----CCHHHHHHHHHHHHHT----CS-SCEEE
T ss_pred CCceEEEECCCCC---Cchh-hHHHHHHHhcCC---eEEEeccCCCC-----cCHHHHHHHHHHHHHh----cC-CCeEE
Confidence 4688999999853 3211 355554443332 46778888752 2344556666665554 23 58999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-------CCCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceE
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-------WLIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVV 184 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-------~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L 184 (1027)
+||||||.+++.++.++|+ +++++|+++|.... ..+..+++|++++||++|.++|++.+..+.+.......
T Consensus 79 ~G~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~ 156 (191)
T 3bdv_A 79 IGHSFGALAACHVVQQGQE--GIAGVMLVAPAEPMRFEIDDRIQASPLSVPTLTFASHNDPLMSFTRAQYWAQAWDSELV 156 (191)
T ss_dssp EEETHHHHHHHHHHHTTCS--SEEEEEEESCCCGGGGTCTTTSCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHHTCEEE
T ss_pred EEEChHHHHHHHHHHhcCC--CccEEEEECCCccccccCccccccccCCCCEEEEecCCCCcCCHHHHHHHHHhcCCcEE
Confidence 9999999999999999998 79999999987542 24577889999999999999999998877765544444
Q ss_pred eec
Q psy15208 185 VIP 187 (1027)
Q Consensus 185 ~t~ 187 (1027)
..+
T Consensus 157 ~~~ 159 (191)
T 3bdv_A 157 DVG 159 (191)
T ss_dssp ECC
T ss_pred EeC
Confidence 443
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.40 E-value=6.1e-12 Score=135.19 Aligned_cols=157 Identities=13% Similarity=0.120 Sum_probs=107.8
Q ss_pred EEEEEecC-Cc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHH---HHHHHHhCCcEEEEEcCCCCCCCC
Q psy15208 6 KFFNINGS-VG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQT---LVRVMLSLGYISIRMNFRGVGASS 80 (1027)
Q Consensus 6 ~~i~I~t~-dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~---la~~La~~Gy~Vla~DlrGhG~S~ 80 (1027)
+.+.+.+. .| ++.+.+|.|++....++.|+||++||+++ +.. .|.. +.+.+++.|+.|+++|.+++|.+.
T Consensus 16 ~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~---~~~--~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~ 90 (280)
T 3ls2_A 16 KQYTHSAVSTHCTMRFAVFLPPGASESNKVPVLYWLSGLTC---TDE--NFMQKAGAFKKAAELGIAIVAPDTSPRGDNV 90 (280)
T ss_dssp EEEEEEETTTTEEEEEEEEECTTCBTTBCEEEEEEECCTTC---CSH--HHHHHSCCHHHHHHHTCEEEECCSSCCSTTS
T ss_pred EEEEEechhcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCC---Chh--hhhcchhHHHHHhhCCeEEEEeCCccccccc
Confidence 34555543 33 78889999986432357899999999743 222 2322 566677779999999998777652
Q ss_pred CC------------CCC--------ccchHHHH-HHHHHHHHHhCCC-CcEEEEEechhHHHHHHHHHhcCCcCCccEEE
Q psy15208 81 GT------------YDS--------GNGETDDM-EILLRYIQKKYPY-LPIILAGFSFGTFVQAKLQKRLDKEISIKILI 138 (1027)
Q Consensus 81 g~------------~~~--------~~~~~~Dv-~avl~~L~~~~~~-~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLV 138 (1027)
.. +.. ......++ ..+..++...++. .+++|+||||||.+|+.++.++|+ .+++++
T Consensus 91 ~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~--~~~~~~ 168 (280)
T 3ls2_A 91 PNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQ--DYVSAS 168 (280)
T ss_dssp CCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHSTT--TCSCEE
T ss_pred ccccccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCch--hheEEE
Confidence 11 100 00122222 3555666666543 579999999999999999999998 789999
Q ss_pred EEccCCCcC---------------------------CCCCC----CCcEEEEEeCCCCCCCh
Q psy15208 139 LISVAVKKW---------------------------LIPEV----PKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 139 li~p~~~~~---------------------------~l~~i----~~PvLiIhG~~D~iVP~ 169 (1027)
+++|..... .+..+ ..|++++||++|.++|.
T Consensus 169 ~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~ 230 (280)
T 3ls2_A 169 AFSPIVNPINCPWGVKAFTGYLGADKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDE 230 (280)
T ss_dssp EESCCSCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCC
T ss_pred EecCccCcccCcchhhHHHhhcCchHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccCC
Confidence 999854311 02223 45999999999999997
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.40 E-value=5e-13 Score=143.10 Aligned_cols=103 Identities=14% Similarity=0.145 Sum_probs=76.3
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-CCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY-DSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~-~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
+|+|||+||++. +. ..|..+++.|++.||+|+++|+||||.|+... .+...+++|+.++++.+.. ...|++|
T Consensus 16 ~~~vvllHG~~~---~~--~~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~~~~~~~~a~~l~~~l~~l~~--~~~p~~l 88 (264)
T 1r3d_A 16 TPLVVLVHGLLG---SG--ADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQAHVT--SEVPVIL 88 (264)
T ss_dssp BCEEEEECCTTC---CG--GGGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHHHHHHTTCC--TTSEEEE
T ss_pred CCcEEEEcCCCC---CH--HHHHHHHHHhcccCceEEEecCCCCCCCCCCCccCHHHHHHHHHHHHHHhCc--CCCceEE
Confidence 478999999843 32 24788999998679999999999999998532 2445566666666554321 1124999
Q ss_pred EEechhHHHHHH---HHHhcCCcCCccEEEEEccCC
Q psy15208 112 AGFSFGTFVQAK---LQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 112 VGhSmGG~vAl~---~A~~~p~~~~V~gLVli~p~~ 144 (1027)
+||||||.+++. +|.++|+ +++++|++++..
T Consensus 89 vGhSmGG~va~~~~~~a~~~p~--~v~~lvl~~~~~ 122 (264)
T 1r3d_A 89 VGYSLGGRLIMHGLAQGAFSRL--NLRGAIIEGGHF 122 (264)
T ss_dssp EEETHHHHHHHHHHHHTTTTTS--EEEEEEEESCCC
T ss_pred EEECHhHHHHHHHHHHHhhCcc--ccceEEEecCCC
Confidence 999999999999 8888998 799999998643
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.8e-12 Score=161.06 Aligned_cols=170 Identities=9% Similarity=0.047 Sum_probs=127.6
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
..+.+++++.+| +++++++.|++....++.|+||++||++.... ...|......|+++||.|+.+|+||+|.+...
T Consensus 479 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~---~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~ 555 (751)
T 2xe4_A 479 KVERRFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSM---DPQFSIQHLPYCDRGMIFAIAHIRGGSELGRA 555 (751)
T ss_dssp EEEEEEEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCC---CCCCCGGGHHHHTTTCEEEEECCTTSCTTCTH
T ss_pred EEEEEEEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCC---CCcchHHHHHHHhCCcEEEEEeeCCCCCcCcc
Confidence 356788998888 79998888875322356899999999753221 11233455678889999999999999986432
Q ss_pred C-------CCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-------
Q psy15208 83 Y-------DSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK------- 146 (1027)
Q Consensus 83 ~-------~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~------- 146 (1027)
+ ........|+.++++++.... +..+++++|+|+||.+++.++.++|+ +++++|+.+|....
T Consensus 556 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~--~~~a~v~~~~~~d~~~~~~~~ 633 (751)
T 2xe4_A 556 WYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPD--LFKVALAGVPFVDVMTTMCDP 633 (751)
T ss_dssp HHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGG--GCSEEEEESCCCCHHHHHTCT
T ss_pred hhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCch--heeEEEEeCCcchHHhhhccc
Confidence 1 112356789999999998763 33579999999999999999999998 78999998875320
Q ss_pred --------C----------------------CCCCCCCc-EEEEEeCCCCCCChHHHHhhhCC
Q psy15208 147 --------W----------------------LIPEVPKN-TIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 147 --------~----------------------~l~~i~~P-vLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
| .+..+..| +|++||++|..||+.++..+++.
T Consensus 634 ~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~ 696 (751)
T 2xe4_A 634 SIPLTTGEWEEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSK 696 (751)
T ss_dssp TSTTHHHHTTTTCCTTSHHHHHHHHHHCTGGGCCSSCCCEEEEEEETTCSSSCTHHHHHHHHH
T ss_pred CcccchhhHHHcCCCCCHHHHHHHHhcChhhhhccCCCCceeEEeeCCCCCCCHHHHHHHHHH
Confidence 0 13345676 99999999999999998877654
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.39 E-value=5.5e-12 Score=138.18 Aligned_cols=148 Identities=11% Similarity=0.024 Sum_probs=106.6
Q ss_pred CCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCC------------CC--CC
Q psy15208 13 SVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFR------------GV--GA 78 (1027)
Q Consensus 13 ~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~Dlr------------Gh--G~ 78 (1027)
.+.++.+++|.|++. .++.|+|||+||+++ +. ..++..+++.|+++||.|+++|+| |+ |.
T Consensus 36 ~~~~l~~~~~~P~~~--~~~~p~vv~lHG~~~---~~-~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~ 109 (304)
T 3d0k_A 36 ADRPFTLNTYRPYGY--TPDRPVVVVQHGVLR---NG-ADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTA 109 (304)
T ss_dssp TTCCEEEEEEECTTC--CTTSCEEEEECCTTC---CH-HHHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCT
T ss_pred CCceEEEEEEeCCCC--CCCCcEEEEeCCCCC---CH-HHHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccc
Confidence 334789998999752 146799999999743 22 122366788898899999999999 66 66
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-------C-
Q psy15208 79 SSGTYDSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW-------L- 148 (1027)
Q Consensus 79 S~g~~~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~-------~- 148 (1027)
|.+..........|+..+++++...+ +..+++|+||||||.+++.++.++|+. +++++|+.+++...+ .
T Consensus 110 s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~~vl~~~~~~~~~~~~~~~~~ 188 (304)
T 3d0k_A 110 AGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHA-PFHAVTAANPGWYTLPTFEHRFPE 188 (304)
T ss_dssp TSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCST-TCSEEEEESCSSCCCSSTTSBTTT
T ss_pred cCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCC-ceEEEEEecCcccccCCccccCcc
Confidence 65432222334578888999998754 345799999999999999999999842 588999877432110 0
Q ss_pred -C-----------CCCCCcEEEEEeCCCCCC
Q psy15208 149 -I-----------PEVPKNTIIIHGELDEII 167 (1027)
Q Consensus 149 -l-----------~~i~~PvLiIhG~~D~iV 167 (1027)
+ .....|++++||+.|..+
T Consensus 189 ~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~ 219 (304)
T 3d0k_A 189 GLDGVGLTEDHLARLLAYPMTILAGDQDIAT 219 (304)
T ss_dssp SSBTTTCCHHHHHHHHHSCCEEEEETTCCCC
T ss_pred ccCCCCCCHHHHHhhhcCCEEEEEeCCCCCc
Confidence 0 113589999999999874
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.38 E-value=2.7e-12 Score=146.91 Aligned_cols=127 Identities=20% Similarity=0.202 Sum_probs=80.6
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCCh------HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCcc--
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDN------KVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGN-- 87 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~------~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~-- 87 (1027)
.+.++++.|.+....++.|+|||+||++........ ..+..++..|+++||.|+++|+||||.|........
T Consensus 62 ~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~ 141 (397)
T 3h2g_A 62 TASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHS 141 (397)
T ss_dssp EEEEEEEEEECTTCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTCH
T ss_pred EEEEEEEeCCCCCCCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhhh
Confidence 478888988753223568999999998653322110 114467888999999999999999999864322211
Q ss_pred ----chHHHHHHHHHHHHHhCCC---CcEEEEEechhHHHHHHHHHh-cC---CcCCccEEEEEcc
Q psy15208 88 ----GETDDMEILLRYIQKKYPY---LPIILAGFSFGTFVQAKLQKR-LD---KEISIKILILISV 142 (1027)
Q Consensus 88 ----~~~~Dv~avl~~L~~~~~~---~pviLVGhSmGG~vAl~~A~~-~p---~~~~V~gLVli~p 142 (1027)
....|....+..+...++. .+++|+||||||.+++.++.. .+ ....+.+++..++
T Consensus 142 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~ 207 (397)
T 3h2g_A 142 ASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISG 207 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESC
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccc
Confidence 1223333333333333332 489999999999999888733 22 1224666666543
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.37 E-value=9.2e-13 Score=151.06 Aligned_cols=131 Identities=14% Similarity=0.073 Sum_probs=97.1
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChH------------HHH----HHHHHHHhCCcE
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNK------------VVQ----TLVRVMLSLGYI 67 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~------------~~~----~la~~La~~Gy~ 67 (1027)
.+.+.+.+.+| .+.++++.|++. .++.|+||++||++. +..+. .|+ .+++.|+++||.
T Consensus 87 ~e~v~~~~~~g~~l~~~l~~P~~~--~~~~P~Vl~~HG~g~---~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~ 161 (391)
T 3g8y_A 87 LEKWEFYPFPKSVSTFLVLKPEHL--KGAVPGVLCIPGSGR---TKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYV 161 (391)
T ss_dssp EEEEEECCSTTCCEEEEEEEETTC--CSCEEEEEEECCTTC---CHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCE
T ss_pred EEEEEEEcCCCCEEEEEEEeCCCC--CCCCCEEEEeCCCCC---CchhhccccccccccchhhcchHHHHHHHHHHCCCE
Confidence 35577887777 899999999752 256899999999743 22110 012 688999999999
Q ss_pred EEEEcCCCCCCCCCCCC-------Cccc---------------hHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHH
Q psy15208 68 SIRMNFRGVGASSGTYD-------SGNG---------------ETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAK 123 (1027)
Q Consensus 68 Vla~DlrGhG~S~g~~~-------~~~~---------------~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~ 123 (1027)
|+++|+||||.|.+... .... .+.|+.++++++..... ..+++++||||||.+++.
T Consensus 162 Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~ 241 (391)
T 3g8y_A 162 AVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMV 241 (391)
T ss_dssp EEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHH
Confidence 99999999999885411 1111 13788899999987542 246999999999999999
Q ss_pred HHHhcCCcCCccEEEEEccC
Q psy15208 124 LQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 124 ~A~~~p~~~~V~gLVli~p~ 143 (1027)
++...+ +++++|+.++.
T Consensus 242 ~a~~~~---~i~a~v~~~~~ 258 (391)
T 3g8y_A 242 LGVLDK---DIYAFVYNDFL 258 (391)
T ss_dssp HHHHCT---TCCEEEEESCB
T ss_pred HHHcCC---ceeEEEEccCC
Confidence 988754 48999988743
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.4e-12 Score=137.76 Aligned_cols=144 Identities=11% Similarity=0.075 Sum_probs=93.9
Q ss_pred CccEEEEECCCCCCCCCCChH--HHHHHHHHHHhCCcEEEEEcCC---------------------CCCCCCCCCCC-cc
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNK--VVQTLVRVMLSLGYISIRMNFR---------------------GVGASSGTYDS-GN 87 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~--~~~~la~~La~~Gy~Vla~Dlr---------------------GhG~S~g~~~~-~~ 87 (1027)
.+|.||++||++ ++.... .+..+++.|.++||+|+++|+| |+|.+.+.+.. ..
T Consensus 4 ~~~~vl~lHG~g---~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~ 80 (243)
T 1ycd_A 4 QIPKLLFLHGFL---QNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEI 80 (243)
T ss_dssp CCCEEEEECCTT---CCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSS
T ss_pred cCceEEEeCCCC---ccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCC
Confidence 468899999984 332211 1225788888889999999999 45554322111 11
Q ss_pred chHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCC----cCCccEEEEEccCCCc---------------
Q psy15208 88 GETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDK----EISIKILILISVAVKK--------------- 146 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~----~~~V~gLVli~p~~~~--------------- 146 (1027)
....|+.++++++.... ...+++|+||||||.+|+.++.+++. ...++.++++++....
T Consensus 81 ~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~ 160 (243)
T 1ycd_A 81 SHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDPEHPGELRITEK 160 (243)
T ss_dssp GGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECTTSTTCEEECGG
T ss_pred cchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCcccccccccccchh
Confidence 12234444444443321 12368999999999999999987631 1146778877764321
Q ss_pred C-----CCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 147 W-----LIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 147 ~-----~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
+ ....+.+|++++||++|+++|++.+..+.+.
T Consensus 161 ~~~~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~ 197 (243)
T 1ycd_A 161 FRDSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDI 197 (243)
T ss_dssp GTTTTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHH
T ss_pred HHHhccCcccCCCCEEEEEeCCCCccCHHHHHHHHHH
Confidence 0 1345789999999999999999988766553
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.7e-12 Score=139.03 Aligned_cols=135 Identities=16% Similarity=0.212 Sum_probs=103.5
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhCC---cEEEEEcCCCCCCC--CCCC------C--------------Cccc
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLG---YISIRMNFRGVGAS--SGTY------D--------------SGNG 88 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~G---y~Vla~DlrGhG~S--~g~~------~--------------~~~~ 88 (1027)
++|||+||++ ++. ..|..+++.|+++| ++|+.+|++++|.+ .+.. + +...
T Consensus 5 ~pvv~iHG~~---~~~--~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~ 79 (250)
T 3lp5_A 5 APVIMVPGSS---ASQ--NRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDK 79 (250)
T ss_dssp CCEEEECCCG---GGH--HHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHH
T ss_pred CCEEEECCCC---CCH--HHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHH
Confidence 4579999973 333 36889999999876 78999888888762 1211 0 1234
Q ss_pred hHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCC---cCCccEEEEEccCCCcC------------------
Q psy15208 89 ETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDK---EISIKILILISVAVKKW------------------ 147 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~---~~~V~gLVli~p~~~~~------------------ 147 (1027)
.++++..+++.+...++..++.|+||||||.+++.++.+++. ..+++++|+++++....
T Consensus 80 ~a~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~~~~~~~~~~l~~~~ 159 (250)
T 3lp5_A 80 QAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTSTTAKTSMFKELYRYR 159 (250)
T ss_dssp HHHHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCSSCCCHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccccccccCHHHHHHHhcc
Confidence 578889999999888888899999999999999999998732 12699999999764311
Q ss_pred -CCCCCCCcEEEEEeC----CCCCCChHHHHh
Q psy15208 148 -LIPEVPKNTIIIHGE----LDEIIPLKDVFL 174 (1027)
Q Consensus 148 -~l~~i~~PvLiIhG~----~D~iVP~~~~~~ 174 (1027)
.++. .+|+++|+|+ .|.+||++.+..
T Consensus 160 ~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~ 190 (250)
T 3lp5_A 160 TGLPE-SLTVYSIAGTENYTSDGTVPYNSVNY 190 (250)
T ss_dssp GGSCT-TCEEEEEECCCCCCTTTBCCHHHHTT
T ss_pred ccCCC-CceEEEEEecCCCCCCceeeHHHHHH
Confidence 1332 6899999999 999999998865
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.37 E-value=3.2e-12 Score=142.55 Aligned_cols=136 Identities=12% Similarity=0.069 Sum_probs=98.7
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
..|.|||+||+.. +++ ...|..+++.| +.+|+|+++|+||||.|.....+...++.|+...++. ..+..+++|
T Consensus 80 ~~~~lv~lhG~~~-~~~--~~~~~~~~~~L-~~~~~v~~~d~~G~G~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~l 152 (319)
T 3lcr_A 80 LGPQLILVCPTVM-TTG--PQVYSRLAEEL-DAGRRVSALVPPGFHGGQALPATLTVLVRSLADVVQA---EVADGEFAL 152 (319)
T ss_dssp SSCEEEEECCSST-TCS--GGGGHHHHHHH-CTTSEEEEEECTTSSTTCCEESSHHHHHHHHHHHHHH---HHTTSCEEE
T ss_pred CCCeEEEECCCCc-CCC--HHHHHHHHHHh-CCCceEEEeeCCCCCCCCCCCCCHHHHHHHHHHHHHH---hcCCCCEEE
Confidence 4688999999632 122 23588999999 5699999999999998776544444555555444443 334458999
Q ss_pred EEechhHHHHHHHHHhc---CCcCCccEEEEEccCCCcC-----------------------------------------
Q psy15208 112 AGFSFGTFVQAKLQKRL---DKEISIKILILISVAVKKW----------------------------------------- 147 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~---p~~~~V~gLVli~p~~~~~----------------------------------------- 147 (1027)
+||||||.+++.+|.++ |+ +++++|++++..+..
T Consensus 153 vGhS~Gg~vA~~~A~~~~~~~~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 230 (319)
T 3lcr_A 153 AGHSSGGVVAYEVARELEARGL--APRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNLSQRITAQVWCLE 230 (319)
T ss_dssp EEETHHHHHHHHHHHHHHHTTC--CCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHHhcCC--CccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHH
Confidence 99999999999999988 66 699999998653210
Q ss_pred -----CCCCCCCcEEEEEeCCCCCCChHHHHhhhC
Q psy15208 148 -----LIPEVPKNTIIIHGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 148 -----~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~ 177 (1027)
....+++|+++++|++ ..+++.....|.+
T Consensus 231 ~~~~~~~~~i~~PvLli~g~~-~~~~~~~~~~~~~ 264 (319)
T 3lcr_A 231 LLRGWRPEGLTAPTLYVRPAQ-PLVEQEKPEWRGD 264 (319)
T ss_dssp HTTTCCCCCCSSCEEEEEESS-CSSSCCCTHHHHH
T ss_pred HHhcCCCCCcCCCEEEEEeCC-CCCCcccchhhhh
Confidence 1246789999999998 5566555555544
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.3e-11 Score=141.78 Aligned_cols=113 Identities=14% Similarity=0.087 Sum_probs=85.9
Q ss_pred ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhC---------CcEEEEEcCCCCCCCCCCCC-
Q psy15208 15 GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL---------GYISIRMNFRGVGASSGTYD- 84 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~---------Gy~Vla~DlrGhG~S~g~~~- 84 (1027)
.++++....+.. +..++|||+||++ ++.. .|..++..|++. ||+|+++|+||||.|.....
T Consensus 78 ~~i~~~~~~~~~----~~~~plll~HG~~---~s~~--~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~~~ 148 (388)
T 4i19_A 78 ATIHFLHVRSPE----PDATPMVITHGWP---GTPV--EFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPLKSA 148 (388)
T ss_dssp EEEEEEEECCSS----TTCEEEEEECCTT---CCGG--GGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCCSSC
T ss_pred eEEEEEEccCCC----CCCCeEEEECCCC---CCHH--HHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCCCCC
Confidence 378877666543 3467799999984 3333 477889999875 99999999999999986542
Q ss_pred --CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 85 --SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 85 --~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+....+.|+..+++. .+..+++++||||||.+++.+|.++|+ +++++++++|
T Consensus 149 ~~~~~~~a~~~~~l~~~----lg~~~~~l~G~S~Gg~ia~~~a~~~p~--~v~~lvl~~~ 202 (388)
T 4i19_A 149 GWELGRIAMAWSKLMAS----LGYERYIAQGGDIGAFTSLLLGAIDPS--HLAGIHVNLL 202 (388)
T ss_dssp CCCHHHHHHHHHHHHHH----TTCSSEEEEESTHHHHHHHHHHHHCGG--GEEEEEESSC
T ss_pred CCCHHHHHHHHHHHHHH----cCCCcEEEEeccHHHHHHHHHHHhChh--hceEEEEecC
Confidence 223344444444443 455689999999999999999999998 7999999985
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.36 E-value=8.6e-12 Score=138.54 Aligned_cols=106 Identities=17% Similarity=0.096 Sum_probs=84.5
Q ss_pred CccE-EEEECCCCCCCCCCChHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHh-CCCCc
Q psy15208 32 LKGV-VLIAHPHPLFGGTMDNKVVQTLVRVMLSL-GYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKK-YPYLP 108 (1027)
Q Consensus 32 ~~pv-VVllHG~~~~gGs~~~~~~~~la~~La~~-Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~-~~~~p 108 (1027)
+.|+ ||++||+++..++. ..|..++..|+++ ||.|+++|+|+++.+.. ....+|+.++++++... .+..+
T Consensus 78 ~~~~~vv~~HGgg~~~g~~--~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~-----~~~~~d~~~a~~~l~~~~~~~~~ 150 (322)
T 3k6k_A 78 AGAAHILYFHGGGYISGSP--STHLVLTTQLAKQSSATLWSLDYRLAPENPF-----PAAVDDCVAAYRALLKTAGSADR 150 (322)
T ss_dssp CCSCEEEEECCSTTTSCCH--HHHHHHHHHHHHHHTCEEEEECCCCTTTSCT-----THHHHHHHHHHHHHHHHHSSGGG
T ss_pred CCCeEEEEEcCCcccCCCh--HHHHHHHHHHHHhcCCEEEEeeCCCCCCCCC-----chHHHHHHHHHHHHHHcCCCCcc
Confidence 4455 99999976555543 3577888888865 99999999999876542 24689999999999887 55568
Q ss_pred EEEEEechhHHHHHHHHHhcCCc--CCccEEEEEccCC
Q psy15208 109 IILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVAV 144 (1027)
Q Consensus 109 viLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~~ 144 (1027)
++|+||||||.+++.++.++|+. ..++++|+++|..
T Consensus 151 i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~ 188 (322)
T 3k6k_A 151 IIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFV 188 (322)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCC
T ss_pred EEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCc
Confidence 99999999999999999987762 2389999999864
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.36 E-value=2.5e-12 Score=156.27 Aligned_cols=135 Identities=21% Similarity=0.229 Sum_probs=103.3
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCC--CCCChHHHH-HHH---HHHHhCCcEEEEEcCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFG--GTMDNKVVQ-TLV---RVMLSLGYISIRMNFRGV 76 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~g--Gs~~~~~~~-~la---~~La~~Gy~Vla~DlrGh 76 (1027)
..+.+.++..|| +|++.++.|++ .++.|+||++||++... .......|. .++ +.|+++||.|+.+|+||+
T Consensus 24 ~~~~v~i~~~DG~~L~~~~~~P~~---~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~ 100 (615)
T 1mpx_A 24 IKREVMIPMRDGVKLHTVIVLPKG---AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGK 100 (615)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTS
T ss_pred EEEEEEEECCCCCEEEEEEEeCCC---CCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCC
Confidence 446688999999 89999999976 24678999999975321 001101132 233 789999999999999999
Q ss_pred CCCCCCCCCc-------c----chHHHHHHHHHHHHHh--CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 77 GASSGTYDSG-------N----GETDDMEILLRYIQKK--YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 77 G~S~g~~~~~-------~----~~~~Dv~avl~~L~~~--~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
|.|.+.+... . ...+|+.++++|+..+ +...+++++||||||.+++.++..+|+ .++++|..++.
T Consensus 101 g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~--~l~a~v~~~~~ 178 (615)
T 1mpx_A 101 YGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHP--ALKVAVPESPM 178 (615)
T ss_dssp TTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCT--TEEEEEEESCC
T ss_pred CCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCC--ceEEEEecCCc
Confidence 9998765332 2 6899999999999887 233479999999999999999988877 68898887654
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.34 E-value=3.7e-12 Score=139.90 Aligned_cols=140 Identities=15% Similarity=0.107 Sum_probs=99.8
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
...|+|||+||++...+ ...|..++..|.. +|.|+++|+||||.|.....+...++.| +.+.+....+..+++
T Consensus 65 ~~~~~lvllhG~~~~~~---~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~~~~~~a~~---~~~~l~~~~~~~~~~ 137 (300)
T 1kez_A 65 PGEVTVICCAGTAAISG---PHEFTRLAGALRG-IAPVRAVPQPGYEEGEPLPSSMAAVAAV---QADAVIRTQGDKPFV 137 (300)
T ss_dssp SCSSEEEECCCSSTTCS---TTTTHHHHHHTSS-SCCBCCCCCTTSSTTCCBCSSHHHHHHH---HHHHHHHHCSSCCEE
T ss_pred CCCCeEEEECCCcccCc---HHHHHHHHHhcCC-CceEEEecCCCCCCCCCCCCCHHHHHHH---HHHHHHHhcCCCCEE
Confidence 45788999999854221 1247788888865 6999999999999987654343344444 344444555667899
Q ss_pred EEEechhHHHHHHHHHhcCC-cCCccEEEEEccCCCc-----------------------------------------CC
Q psy15208 111 LAGFSFGTFVQAKLQKRLDK-EISIKILILISVAVKK-----------------------------------------WL 148 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~-~~~V~gLVli~p~~~~-----------------------------------------~~ 148 (1027)
|+||||||.+++.++.++|+ ..+++++|++++..+. |.
T Consensus 138 LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (300)
T 1kez_A 138 VAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTALGAYDRLTGQWR 217 (300)
T ss_dssp EECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHHHHHGGGCCCCSSCCCHHHHHHHHHHHHHTTTCC
T ss_pred EEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHHHHHHHHHhCcCCccchHHHHHHHHHHHHHhcCC
Confidence 99999999999999999883 1269999999875321 12
Q ss_pred CCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 149 IPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 149 l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
...+++|+++++| +|..+++.. ..|.+..
T Consensus 218 ~~~i~~P~lii~G-~d~~~~~~~-~~~~~~~ 246 (300)
T 1kez_A 218 PRETGLPTLLVSA-GEPMGPWPD-DSWKPTW 246 (300)
T ss_dssp CCCCSCCBEEEEE-SSCSSCCCS-SCCSCCC
T ss_pred CCCCCCCEEEEEe-CCCCCCCcc-cchhhhc
Confidence 3667899999999 566666655 4454443
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=8.7e-12 Score=149.77 Aligned_cols=135 Identities=16% Similarity=0.058 Sum_probs=107.0
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCC-h--HHH---------------HHHHHHHHhC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMD-N--KVV---------------QTLVRVMLSL 64 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~-~--~~~---------------~~la~~La~~ 64 (1027)
..+.+.|+..|| +|++.+|.|++ .++.|+||+.||++...+... . ..| ...++.|+++
T Consensus 40 ~~~~v~i~~~DG~~L~a~l~~P~~---~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~ 116 (560)
T 3iii_A 40 MEKDGTVEMRDGEKLYINIFRPNK---DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPN 116 (560)
T ss_dssp EEEEEEEECTTSCEEEEEEEECSS---SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGG
T ss_pred EEEEEEEECCCCcEEEEEEEecCC---CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhC
Confidence 456788999999 89999999986 357899999999865432110 0 000 0136889999
Q ss_pred CcEEEEEcCCCCCCCCCCCCCc-cchHHHHHHHHHHHHHhC-CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 65 GYISIRMNFRGVGASSGTYDSG-NGETDDMEILLRYIQKKY-PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 65 Gy~Vla~DlrGhG~S~g~~~~~-~~~~~Dv~avl~~L~~~~-~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
||.|+++|+||+|.|.+.+..+ .....|+.++++|+..+. ...+++++||||||.+++.+|...|+ .++++|..++
T Consensus 117 Gy~vv~~D~RG~G~S~G~~~~~~~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~--~l~aiv~~~~ 194 (560)
T 3iii_A 117 DYVVVKVALRGSDKSKGVLSPWSKREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPP--HLKAMIPWEG 194 (560)
T ss_dssp TCEEEEEECTTSTTCCSCBCTTSHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCT--TEEEEEEESC
T ss_pred CCEEEEEcCCCCCCCCCccccCChhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCC--ceEEEEecCC
Confidence 9999999999999999876544 367999999999998752 12479999999999999999999887 7999999987
Q ss_pred C
Q psy15208 143 A 143 (1027)
Q Consensus 143 ~ 143 (1027)
.
T Consensus 195 ~ 195 (560)
T 3iii_A 195 L 195 (560)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.7e-12 Score=146.18 Aligned_cols=102 Identities=17% Similarity=0.184 Sum_probs=88.0
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecC----CCcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCT----GNYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~at----G~~~vi~ 880 (1027)
+..+.||+|+|+|+|.||+.+|+++++|||+|+++|+.+. ......++...+++++++++|+|+.++ .|+++|+
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~--~~~~~~~~~~~~l~ell~~sDivslh~Plt~~T~~li~ 213 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKR--EDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMIN 213 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBC
T ss_pred cceecCcEEEEECcchHHHHHHHhhcccCceeeecCCccc--hhhhhcCceecCHHHHHhhCCEEEEcCCCChhhccCcC
Confidence 4578999999999999999999999999999999987553 344566888899999999999999765 4679999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++.|++||+|++|||+|... -+|.++|.
T Consensus 214 ~~~l~~mk~~a~lIN~aRG~-iVde~aL~ 241 (334)
T 3kb6_A 214 EERISLMKDGVYLINTARGK-VVDTDALY 241 (334)
T ss_dssp HHHHHHSCTTEEEEECSCGG-GBCHHHHH
T ss_pred HHHHhhcCCCeEEEecCccc-cccHHHHH
Confidence 99999999999999999984 36666554
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.31 E-value=1.7e-11 Score=152.34 Aligned_cols=164 Identities=18% Similarity=0.197 Sum_probs=123.6
Q ss_pred cCCc-e--EEEEEEecCCccccCCccEEEEECCCCCCCCC------------------C-------------------C-
Q psy15208 12 GSVG-I--LHCAINFPSSIKLLKLKGVVLIAHPHPLFGGT------------------M-------------------D- 50 (1027)
Q Consensus 12 t~dG-~--I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs------------------~-------------------~- 50 (1027)
..|| + |.+.+|.|++ .++.|+||..||++..+.. . .
T Consensus 180 ~~DG~~d~L~a~l~~P~~---~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~ 256 (763)
T 1lns_A 180 EQRGENDLIKIQIIRPKS---TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKELP 256 (763)
T ss_dssp TCSSSCCEEEEEEEECCC---SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCCCC
T ss_pred CCCCCeeeEEEEEEecCC---CCcccEEEecCCcCCCCcccccccccccccccccccCcccccccccccccccccccccc
Confidence 5677 6 9999999986 2567999999998532110 0 0
Q ss_pred -----hHHH-----HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCc-cchHHHHHHHHHHHHHh----------------
Q psy15208 51 -----NKVV-----QTLVRVMLSLGYISIRMNFRGVGASSGTYDSG-NGETDDMEILLRYIQKK---------------- 103 (1027)
Q Consensus 51 -----~~~~-----~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~-~~~~~Dv~avl~~L~~~---------------- 103 (1027)
...| ..+.++|+++||.|+++|+||+|.|++..... .....|+.++++|+..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~ 336 (763)
T 1lns_A 257 IVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKAS 336 (763)
T ss_dssp EESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCT
T ss_pred ccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCcCCCCCHHHHHHHHHHHHHHhhccccccccccccccccc
Confidence 0001 13568899999999999999999999865332 35789999999999742
Q ss_pred CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC------------------c-------------------
Q psy15208 104 YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK------------------K------------------- 146 (1027)
Q Consensus 104 ~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~------------------~------------------- 146 (1027)
....+++++||||||.+++.+|..+|+ .++++|..++... .
T Consensus 337 ~~~grVgl~G~SyGG~ial~~Aa~~p~--~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~~~g~ 414 (763)
T 1lns_A 337 WANGKVAMTGKSYLGTMAYGAATTGVE--GLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGAD 414 (763)
T ss_dssp TEEEEEEEEEETHHHHHHHHHHTTTCT--TEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHH
T ss_pred CCCCcEEEEEECHHHHHHHHHHHhCCc--ccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhhcCcch
Confidence 112479999999999999999999887 6899998876420 0
Q ss_pred -----------------------------C-------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 147 -----------------------------W-------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 147 -----------------------------~-------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
| .+.++++|+|++||..|..+|+..+.++++.+.
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~ 484 (763)
T 1lns_A 415 FLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALP 484 (763)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSC
T ss_pred hhhHHHHHHHHHHHHHhhhhhccCchhHHhhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhc
Confidence 0 123467999999999999999999887776554
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.31 E-value=2.5e-11 Score=131.31 Aligned_cols=138 Identities=14% Similarity=0.104 Sum_probs=105.7
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCc--EEEEEcCCCCCCCC--CCC------------------CCccchH
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGY--ISIRMNFRGVGASS--GTY------------------DSGNGET 90 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy--~Vla~DlrGhG~S~--g~~------------------~~~~~~~ 90 (1027)
.++|||+||+ +++.. .|..+++.|++.|+ +|+.+|++++|.+. +.. .++...+
T Consensus 6 ~~pvvliHG~---~~~~~--~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~ 80 (249)
T 3fle_A 6 TTATLFLHGY---GGSER--SETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENA 80 (249)
T ss_dssp CEEEEEECCT---TCCGG--GTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHH
T ss_pred CCcEEEECCC---CCChh--HHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHH
Confidence 4568999998 34443 48899999999986 69999999998742 211 0112357
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCc---CCccEEEEEccCCCcC--------------------
Q psy15208 91 DDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKE---ISIKILILISVAVKKW-------------------- 147 (1027)
Q Consensus 91 ~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~---~~V~gLVli~p~~~~~-------------------- 147 (1027)
+++..+++.+...++..++.|+||||||.+++.++.++|.. .+++++|+++++....
T Consensus 81 ~~l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~~g~p~~ 160 (249)
T 3fle_A 81 YWIKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNEIIVDKQGKPSR 160 (249)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTTSCBCTTCCBSS
T ss_pred HHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcchhhhcccCCCcc
Confidence 88899999998888888999999999999999999998741 3699999998653210
Q ss_pred -------C------CCCCCCcEEEEEeC------CCCCCChHHHHhh
Q psy15208 148 -------L------IPEVPKNTIIIHGE------LDEIIPLKDVFLW 175 (1027)
Q Consensus 148 -------~------l~~i~~PvLiIhG~------~D~iVP~~~~~~l 175 (1027)
+ ++...+|++.|+|+ .|.+||..++..+
T Consensus 161 ~~~~~~~l~~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~ 207 (249)
T 3fle_A 161 MNAAYRQLLSLYKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSL 207 (249)
T ss_dssp CCHHHHHTGGGHHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTH
T ss_pred cCHHHHHHHHHHhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHH
Confidence 0 22356789999998 7999999998633
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.9e-11 Score=130.23 Aligned_cols=139 Identities=12% Similarity=0.156 Sum_probs=101.2
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCc---EEEEEcCCCCC------CCC----C---------CCCCccchHH
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGY---ISIRMNFRGVG------ASS----G---------TYDSGNGETD 91 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy---~Vla~DlrGhG------~S~----g---------~~~~~~~~~~ 91 (1027)
++|||+||++. +.. .|..+++.|+++++ .++.++.+++| .+. . ...+....++
T Consensus 4 ~pvvllHG~~~---~~~--~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~ 78 (254)
T 3ds8_A 4 IPIILIHGSGG---NAS--SLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSK 78 (254)
T ss_dssp CCEEEECCTTC---CTT--TTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHH
T ss_pred CCEEEECCCCC---Ccc--hHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHH
Confidence 45799999853 332 37889999998765 34444443333 121 1 1124456788
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcC---CccEEEEEccCCCcC---------------------
Q psy15208 92 DMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEI---SIKILILISVAVKKW--------------------- 147 (1027)
Q Consensus 92 Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~---~V~gLVli~p~~~~~--------------------- 147 (1027)
|+..+++.+...++..+++|+||||||.+++.++.++|+.. +++++|+++++....
T Consensus 79 ~l~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~p~~~~~~ 158 (254)
T 3ds8_A 79 WLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGMDLSFKKLPNSTPQM 158 (254)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCSCTTCSSCSSCCHHH
T ss_pred HHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccccccccccCCcchHHH
Confidence 88888899988878789999999999999999999998732 689999999754311
Q ss_pred --------CCCCCCCcEEEEEeC------CCCCCChHHHHhhhCC
Q psy15208 148 --------LIPEVPKNTIIIHGE------LDEIIPLKDVFLWANP 178 (1027)
Q Consensus 148 --------~l~~i~~PvLiIhG~------~D~iVP~~~~~~l~~~ 178 (1027)
.++. .+|++.|||+ .|.+||++.+..+...
T Consensus 159 ~~~~~~~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~ 202 (254)
T 3ds8_A 159 DYFIKNQTEVSP-DLEVLAIAGELSEDNPTDGIVPTISSLATRLF 202 (254)
T ss_dssp HHHHHTGGGSCT-TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGT
T ss_pred HHHHHHHhhCCC-CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHH
Confidence 1222 6899999999 9999999999876543
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1.4e-11 Score=140.39 Aligned_cols=130 Identities=15% Similarity=0.146 Sum_probs=97.7
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-----------------CC--------
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY-----------------DS-------- 85 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~-----------------~~-------- 85 (1027)
.+.|+|||+||++ ++.. .|..+++.|+++||.|+++|+||+|.|.... ..
T Consensus 96 ~~~P~Vv~~HG~~---~~~~--~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 170 (383)
T 3d59_A 96 EKYPLVVFSHGLG---AFRT--LYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETH 170 (383)
T ss_dssp SCEEEEEEECCTT---CCTT--TTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHH
T ss_pred CCCCEEEEcCCCC---CCch--HHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchh
Confidence 4679999999974 3333 3678999999999999999999999875310 00
Q ss_pred -----ccchHHHHHHHHHHHHHh----------------------CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEE
Q psy15208 86 -----GNGETDDMEILLRYIQKK----------------------YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILI 138 (1027)
Q Consensus 86 -----~~~~~~Dv~avl~~L~~~----------------------~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLV 138 (1027)
....+.|+..+++++... .+..+++++||||||.+++.++.+.+ +++++|
T Consensus 171 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~---~v~a~v 247 (383)
T 3d59_A 171 IRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ---RFRCGI 247 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT---TCCEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC---CccEEE
Confidence 011256888888888651 11236999999999999999988765 499999
Q ss_pred EEccCCCcC---CCCCCCCcEEEEEeCCCCCCC
Q psy15208 139 LISVAVKKW---LIPEVPKNTIIIHGELDEIIP 168 (1027)
Q Consensus 139 li~p~~~~~---~l~~i~~PvLiIhG~~D~iVP 168 (1027)
++++..... .+..+.+|+|++||++|..++
T Consensus 248 ~~~~~~~p~~~~~~~~i~~P~Lii~g~~D~~~~ 280 (383)
T 3d59_A 248 ALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPA 280 (383)
T ss_dssp EESCCCTTCCGGGGGSCCSCEEEEEETTTCCHH
T ss_pred EeCCccCCCchhhhccCCCCEEEEecccccchh
Confidence 999864322 246788999999999998643
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.27 E-value=6.4e-12 Score=132.46 Aligned_cols=84 Identities=17% Similarity=0.228 Sum_probs=63.8
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC---CCc
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYP---YLP 108 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~---~~p 108 (1027)
+++.|||+||++ ++ ...|..+++.|++ +|+|+++|+||||.|.... ..|+..+++.+..... ..+
T Consensus 12 ~~~~lv~lhg~g---~~--~~~~~~~~~~L~~-~~~vi~~Dl~GhG~S~~~~------~~~~~~~~~~~~~~l~~~~~~~ 79 (242)
T 2k2q_B 12 EKTQLICFPFAG---GY--SASFRPLHAFLQG-ECEMLAAEPPGHGTNQTSA------IEDLEELTDLYKQELNLRPDRP 79 (242)
T ss_dssp CCCEEESSCCCC---HH--HHHHHHHHHHHCC-SCCCEEEECCSSCCSCCCT------TTHHHHHHHHTTTTCCCCCCSS
T ss_pred CCceEEEECCCC---CC--HHHHHHHHHhCCC-CeEEEEEeCCCCCCCCCCC------cCCHHHHHHHHHHHHHhhcCCC
Confidence 467789999973 32 2368889999965 7999999999999997531 3455556655543332 258
Q ss_pred EEEEEechhHHHHHHHHHh
Q psy15208 109 IILAGFSFGTFVQAKLQKR 127 (1027)
Q Consensus 109 viLVGhSmGG~vAl~~A~~ 127 (1027)
++|+||||||.+|+.+|.+
T Consensus 80 ~~lvGhSmGG~iA~~~A~~ 98 (242)
T 2k2q_B 80 FVLFGHSMGGMITFRLAQK 98 (242)
T ss_dssp CEEECCSSCCHHHHHHHHH
T ss_pred EEEEeCCHhHHHHHHHHHH
Confidence 9999999999999999987
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=2.8e-11 Score=135.40 Aligned_cols=146 Identities=12% Similarity=0.051 Sum_probs=106.0
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHH-HHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQ-TLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDME 94 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~-~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~ 94 (1027)
++...++.|.+.. ...++.|||+||++. +.. ..|. .+++.|.++||+|+++|+||||.+. ......++.
T Consensus 15 ~l~~~i~~p~~~~-~~~~~~VvllHG~~~---~~~-~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~-----~~~~~~~l~ 84 (317)
T 1tca_A 15 VLDAGLTCQGASP-SSVSKPILLVPGTGT---TGP-QSFDSNWIPLSTQLGYTPCWISPPPFMLND-----TQVNTEYMV 84 (317)
T ss_dssp HHHHTEEETTBCT-TSCSSEEEEECCTTC---CHH-HHHTTTHHHHHHTTTCEEEEECCTTTTCSC-----HHHHHHHHH
T ss_pred HHhheeeCCCCCC-CCCCCeEEEECCCCC---Ccc-hhhHHHHHHHHHhCCCEEEEECCCCCCCCc-----HHHHHHHHH
Confidence 3444455565421 134567899999742 221 1266 7899999999999999999998764 223467788
Q ss_pred HHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCC-cCCccEEEEEccCCCc-------------------------C-
Q psy15208 95 ILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDK-EISIKILILISVAVKK-------------------------W- 147 (1027)
Q Consensus 95 avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~-~~~V~gLVli~p~~~~-------------------------~- 147 (1027)
..++++....+..+++|+||||||.++..++..+|. ..+++++|+++++... +
T Consensus 85 ~~i~~~~~~~g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~s~f~ 164 (317)
T 1tca_A 85 NAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDALAVSAPSVWQQTTGSALT 164 (317)
T ss_dssp HHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHHHTTCBCHHHHHTBTTCHHH
T ss_pred HHHHHHHHHhCCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchhhhhhhhhcCchHHhhCcCcHHH
Confidence 888888777776789999999999999999888761 1279999999986321 0
Q ss_pred -CC-----CCCCCcEEEEEeCCCCCCChHH
Q psy15208 148 -LI-----PEVPKNTIIIHGELDEIIPLKD 171 (1027)
Q Consensus 148 -~l-----~~i~~PvLiIhG~~D~iVP~~~ 171 (1027)
.+ .....|++++||+.|.++++..
T Consensus 165 ~~L~~~~~~~~~vp~~~i~g~~D~iV~p~~ 194 (317)
T 1tca_A 165 TALRNAGGLTQIVPTTNLYSATDEIVQPQV 194 (317)
T ss_dssp HHHHHTTTTBCSSCEEEEECTTCSSSCCCC
T ss_pred HHHHhcCCCCCCCCEEEEEeCCCCeECCcc
Confidence 01 1146899999999999998866
|
| >4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.27 E-value=7.3e-12 Score=142.35 Aligned_cols=104 Identities=17% Similarity=0.271 Sum_probs=87.8
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccC
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
.+..+.||+|+|+|+|.||+.+|+++++||++|+++|+++ ....+...|+...+++++++++|+|+.++. +.+++
T Consensus 170 ~~~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~-~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li 248 (365)
T 4hy3_A 170 SARLIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWL-PRSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFL 248 (365)
T ss_dssp SCCCSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSS-CHHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CC
T ss_pred cccccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCC-CHHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhc
Confidence 3567999999999999999999999999999999999876 445566789888899999999999998654 56899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.+.|+.||+|+++||+|..+. +|.+.|.
T Consensus 249 ~~~~l~~mk~gailIN~aRG~~-vde~aL~ 277 (365)
T 4hy3_A 249 GAEAFSSMRRGAAFILLSRADV-VDFDALM 277 (365)
T ss_dssp CHHHHHTSCTTCEEEECSCGGG-SCHHHHH
T ss_pred CHHHHhcCCCCcEEEECcCCch-hCHHHHH
Confidence 9999999999999999999843 5555554
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=8.1e-11 Score=136.16 Aligned_cols=111 Identities=20% Similarity=0.230 Sum_probs=80.0
Q ss_pred Cc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh------CCcEEEEEcCCCCCCCCCCC---
Q psy15208 14 VG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS------LGYISIRMNFRGVGASSGTY--- 83 (1027)
Q Consensus 14 dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~------~Gy~Vla~DlrGhG~S~g~~--- 83 (1027)
+| +|++....+.. +..++|||+||++ ++.. .|..+++.|++ .||+|+++|+||||.|+...
T Consensus 93 ~g~~i~~~~~~~~~----~~~~pllllHG~~---~s~~--~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~~~ 163 (408)
T 3g02_A 93 EGLTIHFAALFSER----EDAVPIALLHGWP---GSFV--EFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDK 163 (408)
T ss_dssp TTEEEEEEEECCSC----TTCEEEEEECCSS---CCGG--GGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCSSS
T ss_pred CCEEEEEEEecCCC----CCCCeEEEECCCC---CcHH--HHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCCCCC
Confidence 44 78877776543 2356789999984 3332 47788888887 58999999999999998743
Q ss_pred -CCccchHHHHHHHHHHHHHhCCCC-cEEEEEechhHHHHHHHHHhcCCcCCccEEEEE
Q psy15208 84 -DSGNGETDDMEILLRYIQKKYPYL-PIILAGFSFGTFVQAKLQKRLDKEISIKILILI 140 (1027)
Q Consensus 84 -~~~~~~~~Dv~avl~~L~~~~~~~-pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli 140 (1027)
.+....+.|+..+++. .+.. +++++||||||.+++.+|.++|+ +.++++.
T Consensus 164 ~~~~~~~a~~~~~l~~~----lg~~~~~~lvG~S~Gg~ia~~~A~~~p~---~~~~~l~ 215 (408)
T 3g02_A 164 DFGLMDNARVVDQLMKD----LGFGSGYIIQGGDIGSFVGRLLGVGFDA---CKAVHLN 215 (408)
T ss_dssp CCCHHHHHHHHHHHHHH----TTCTTCEEEEECTHHHHHHHHHHHHCTT---EEEEEES
T ss_pred CCCHHHHHHHHHHHHHH----hCCCCCEEEeCCCchHHHHHHHHHhCCC---ceEEEEe
Confidence 1223445555555543 4554 79999999999999999999976 4444443
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.1e-11 Score=142.57 Aligned_cols=130 Identities=15% Similarity=0.093 Sum_probs=96.1
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChH------------HH----HHHHHHHHhCCcE
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNK------------VV----QTLVRVMLSLGYI 67 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~------------~~----~~la~~La~~Gy~ 67 (1027)
.+.+.+.+.+| ++.++++.|++. .++.|+||++||++. +..+. .| ..+++.|+++||.
T Consensus 92 ~e~v~~~~~~g~~l~~~l~~P~~~--~~~~P~Vv~~HG~g~---~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~ 166 (398)
T 3nuz_A 92 LEKWEFYPLPKCVSTFLVLIPDNI--NKPVPAILCIPGSGG---NKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYI 166 (398)
T ss_dssp EEEEEECCSTTBCEEEEEEEESSC--CSCEEEEEEECCTTC---CHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCE
T ss_pred EEEEEEEcCCCcEEEEEEEeCCCC--CCCccEEEEEcCCCC---CcccccccccccccccccccchHHHHHHHHHHCCCE
Confidence 45677888777 899999999762 256899999999742 21110 01 1588999999999
Q ss_pred EEEEcCCCCCCCCCCCC-------C---------------ccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHH
Q psy15208 68 SIRMNFRGVGASSGTYD-------S---------------GNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAK 123 (1027)
Q Consensus 68 Vla~DlrGhG~S~g~~~-------~---------------~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~ 123 (1027)
|+++|+||||.|.+... . ....+.|+..+++++..... ..+++++||||||.+++.
T Consensus 167 Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~ 246 (398)
T 3nuz_A 167 AVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMV 246 (398)
T ss_dssp EEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHH
Confidence 99999999999875320 0 01134788889999976532 246999999999999999
Q ss_pred HHHhcCCcCCccEEEEEcc
Q psy15208 124 LQKRLDKEISIKILILISV 142 (1027)
Q Consensus 124 ~A~~~p~~~~V~gLVli~p 142 (1027)
++...+ +++++|..++
T Consensus 247 ~aa~~~---~i~a~v~~~~ 262 (398)
T 3nuz_A 247 LGTLDT---SIYAFVYNDF 262 (398)
T ss_dssp HHHHCT---TCCEEEEESC
T ss_pred HHhcCC---cEEEEEEecc
Confidence 888765 4888888654
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.26 E-value=7e-12 Score=141.61 Aligned_cols=102 Identities=21% Similarity=0.295 Sum_probs=86.8
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.||+|+|+|+|.||+.+|++++++|++|+++|+++.....+. |+... +++++++++|+|+.+++ +.+++
T Consensus 168 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li 245 (345)
T 4g2n_A 168 GMGLTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIYHDTLDSLLGASDIFLIAAPGRPELKGFL 245 (345)
T ss_dssp BCCCTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEECSSHHHHHHTCSEEEECSCCCGGGTTCB
T ss_pred ccccCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeEeCCHHHHHhhCCEEEEecCCCHHHHHHh
Confidence 5579999999999999999999999999999999998875444333 77766 89999999999998876 45899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+++.|+.||+|+++||+|.... +|.+.|.
T Consensus 246 ~~~~l~~mk~gailIN~aRG~~-vde~aL~ 274 (345)
T 4g2n_A 246 DHDRIAKIPEGAVVINISRGDL-INDDALI 274 (345)
T ss_dssp CHHHHHHSCTTEEEEECSCGGG-BCHHHHH
T ss_pred CHHHHhhCCCCcEEEECCCCch-hCHHHHH
Confidence 9999999999999999999743 4555554
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.3e-11 Score=131.35 Aligned_cols=148 Identities=20% Similarity=0.178 Sum_probs=99.3
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChH-HHHHHHHHHHhCCcEEEEEcCCCCCCCCC------------C
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNK-VVQTLVRVMLSLGYISIRMNFRGVGASSG------------T 82 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~-~~~~la~~La~~Gy~Vla~DlrGhG~S~g------------~ 82 (1027)
.+.+.+|.|++.. .++.|+||++||+++ +..+. ....+.+.+++.|+.|+++|.+++|.+.. .
T Consensus 35 ~~~~~v~~P~~~~-~~~~p~vv~lHG~~~---~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~~~ 110 (283)
T 4b6g_A 35 EMKFAVYLPNNPE-NRPLGVIYWLSGLTC---TEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSAGF 110 (283)
T ss_dssp EEEEEEEECCCTT-CCCEEEEEEECCTTC---CSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTBCT
T ss_pred ceEEEEEeCCCCC-CCCCCEEEEEcCCCC---CccchhhcccHHHHHhhCCeEEEEeccccccccccccccccccCCCcc
Confidence 7888899997632 356899999999743 22221 11234666777899999999874443210 0
Q ss_pred CC-----Cc---cchHHH-HHHHHHHHHHhCCC-CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc------
Q psy15208 83 YD-----SG---NGETDD-MEILLRYIQKKYPY-LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK------ 146 (1027)
Q Consensus 83 ~~-----~~---~~~~~D-v~avl~~L~~~~~~-~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~------ 146 (1027)
+. .. ...... +..+..++...++. .+++|+||||||.+|+.++.++|+ .++++++++|....
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~--~~~~~~~~s~~~~~~~~~~~ 188 (283)
T 4b6g_A 111 YLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQE--RYQSVSAFSPILSPSLVPWG 188 (283)
T ss_dssp TSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGG--GCSCEEEESCCCCGGGSHHH
T ss_pred cccCccCcccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCc--cceeEEEECCccccccCcch
Confidence 10 00 011222 23556666666543 579999999999999999999998 78999999985431
Q ss_pred --------------CC-------CCC--CCCcEEEEEeCCCCCCCh
Q psy15208 147 --------------WL-------IPE--VPKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 147 --------------~~-------l~~--i~~PvLiIhG~~D~iVP~ 169 (1027)
|. +.. ...|++++||+.|.+++.
T Consensus 189 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~ 234 (283)
T 4b6g_A 189 EKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPT 234 (283)
T ss_dssp HHHHHHHHCSCGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHHH
T ss_pred hhhHHhhcCCchHHHHhcCHHHHHHhcccCCCEEEEecCCCccCcc
Confidence 10 111 235999999999999987
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=6.6e-12 Score=141.27 Aligned_cols=104 Identities=12% Similarity=0.135 Sum_probs=90.1
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++.....+...|+...+++++++++|+|+.++. +.++++
T Consensus 140 ~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 219 (330)
T 4e5n_A 140 GTGLDNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVN 219 (330)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCSTTTTTCBC
T ss_pred CCccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCCHHHHHHhC
Confidence 5578999999999999999999999999999999999885555666778888899999999999998765 568999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.+.|+.||+|++++|+|.... +|.+.+.
T Consensus 220 ~~~l~~mk~gailIN~arg~~-vd~~aL~ 247 (330)
T 4e5n_A 220 AELLALVRPGALLVNPCRGSV-VDEAAVL 247 (330)
T ss_dssp HHHHTTSCTTEEEEECSCGGG-BCHHHHH
T ss_pred HHHHhhCCCCcEEEECCCCch-hCHHHHH
Confidence 999999999999999999743 4555444
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.25 E-value=5e-12 Score=147.37 Aligned_cols=133 Identities=15% Similarity=0.180 Sum_probs=101.6
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHH-HHHHHHh-CCcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhC--
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQT-LVRVMLS-LGYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKKY-- 104 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~-la~~La~-~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~~-- 104 (1027)
+.+|+|||+||++. +... .|.. +++.|.+ .||+|+++|+||||.|.... .+......|+.++++++.+..
T Consensus 68 ~~~~~vvllHG~~~---s~~~-~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~~~~~~~~~~~dl~~~i~~l~~~~g~ 143 (432)
T 1gpl_A 68 LNRKTRFIIHGFTD---SGEN-SWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQASQNIRVVGAEVAYLVQVLSTSLNY 143 (432)
T ss_dssp TTSEEEEEECCTTC---CTTS-HHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCeEEEECCCCC---CCCc-hHHHHHHHHHHhcCCcEEEEEECccccCccchhhHhhHHHHHHHHHHHHHHHHHhcCC
Confidence 35789999999853 3311 3554 7888876 79999999999999987210 122345688999999997543
Q ss_pred CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC----C----CCCCCcEEEEEeCCCCCCCh
Q psy15208 105 PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL----I----PEVPKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 105 ~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~----l----~~i~~PvLiIhG~~D~iVP~ 169 (1027)
+..+++|+||||||.+|+.++.++|+ +++++++++|..+.+. . .....|+.+||+..|+++|.
T Consensus 144 ~~~~i~lvGhSlGg~vA~~~a~~~p~--~v~~iv~l~pa~p~~~~~~~~~~l~~~da~~V~vIHt~~d~lVP~ 214 (432)
T 1gpl_A 144 APENVHIIGHSLGAHTAGEAGKRLNG--LVGRITGLDPAEPYFQDTPEEVRLDPSDAKFVDVIHTDISPILPS 214 (432)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHTTTT--CSSEEEEESCBCTTTTTCCTTTSCCGGGSSEEEEECSCCSCHHHH
T ss_pred CcccEEEEEeCHHHHHHHHHHHhccc--ccceeEEeccccccccCCChhhccCcCCCceEEEEEcCCcccccc
Confidence 35689999999999999999999988 7999999998765331 1 12345899999999999887
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=2e-11 Score=134.50 Aligned_cols=141 Identities=17% Similarity=0.173 Sum_probs=98.4
Q ss_pred cCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhC--CcEEEEEcCC------CCCCCCCCC-----CCc-------cch
Q psy15208 30 LKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL--GYISIRMNFR------GVGASSGTY-----DSG-------NGE 89 (1027)
Q Consensus 30 ~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~--Gy~Vla~Dlr------GhG~S~g~~-----~~~-------~~~ 89 (1027)
.++.|+|||+||++ ++. ..|..+++.|+.+ ++.+++++-| |.|.+.-.. ... ...
T Consensus 63 ~~~~plVI~LHG~G---~~~--~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~ 137 (285)
T 4fhz_A 63 GEATSLVVFLHGYG---ADG--ADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAA 137 (285)
T ss_dssp TCCSEEEEEECCTT---BCH--HHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHH
T ss_pred CCCCcEEEEEcCCC---CCH--HHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHH
Confidence 35789999999974 332 2466778888764 8899998754 444432110 010 112
Q ss_pred HHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC----CCCCCCCcEEEEEeCC
Q psy15208 90 TDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW----LIPEVPKNTIIIHGEL 163 (1027)
Q Consensus 90 ~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~----~l~~i~~PvLiIhG~~ 163 (1027)
..++.++++.+...++ ..+++|+|+||||.+++.++.++|+ +++++|.+++..... .......|++++||++
T Consensus 138 ~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~--~~a~vv~~sG~l~~~~~~~~~~~~~~Pvl~~hG~~ 215 (285)
T 4fhz_A 138 ARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAE--EIAGIVGFSGRLLAPERLAEEARSKPPVLLVHGDA 215 (285)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSS--CCSEEEEESCCCSCHHHHHHHCCCCCCEEEEEETT
T ss_pred HHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcc--cCceEEEeecCccCchhhhhhhhhcCcccceeeCC
Confidence 3445555555555443 3579999999999999999999998 799999998754321 1234568999999999
Q ss_pred CCCCChHHHHhhhC
Q psy15208 164 DEIIPLKDVFLWAN 177 (1027)
Q Consensus 164 D~iVP~~~~~~l~~ 177 (1027)
|++||++.+..+.+
T Consensus 216 D~~Vp~~~~~~~~~ 229 (285)
T 4fhz_A 216 DPVVPFADMSLAGE 229 (285)
T ss_dssp CSSSCTHHHHHHHH
T ss_pred CCCcCHHHHHHHHH
Confidence 99999998875554
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.24 E-value=3.5e-11 Score=147.23 Aligned_cols=134 Identities=19% Similarity=0.192 Sum_probs=102.0
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCC---CCChHHHHH-H--H-HHHHhCCcEEEEEcCCCC
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGG---TMDNKVVQT-L--V-RVMLSLGYISIRMNFRGV 76 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gG---s~~~~~~~~-l--a-~~La~~Gy~Vla~DlrGh 76 (1027)
.+.+.|++.|| +|++.+|.|++ .++.|+||++||++...+ ......|.. + + +.|+++||.|+.+|+||+
T Consensus 37 ~~~v~i~~~DG~~L~~~l~~P~~---~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~ 113 (652)
T 2b9v_A 37 KREVMVPMRDGVKLYTVIVIPKN---ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGK 113 (652)
T ss_dssp EEEEEEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTS
T ss_pred EEEEEEECCCCcEEEEEEEecCC---CCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcC
Confidence 46688999999 89999999976 246789999998753210 011101222 2 3 789999999999999999
Q ss_pred CCCCCCCCCc-------c----chHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 77 GASSGTYDSG-------N----GETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 77 G~S~g~~~~~-------~----~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
|.|.+.+... . ...+|+.++++|+..+. ...+++++||||||.+++.++.+.|+ .++++|..++.
T Consensus 114 g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~--~lka~v~~~~~ 191 (652)
T 2b9v_A 114 YGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHP--ALKVAAPESPM 191 (652)
T ss_dssp TTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCT--TEEEEEEEEEC
T ss_pred CCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCC--ceEEEEecccc
Confidence 9999865332 2 68899999999998762 23479999999999999999988877 68888887653
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=99.24 E-value=1.5e-11 Score=139.29 Aligned_cols=104 Identities=13% Similarity=0.148 Sum_probs=90.2
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++.....+...|+... +++++++++|+|+.+++ +.+++
T Consensus 159 ~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li 238 (351)
T 3jtm_A 159 AYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMF 238 (351)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCB
T ss_pred cccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhh
Confidence 55799999999999999999999999999999999998766666777788765 89999999999998765 56899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.+.|+.||+|++|||+|... -+|.+.|.
T Consensus 239 ~~~~l~~mk~gailIN~aRG~-~vde~aL~ 267 (351)
T 3jtm_A 239 NKELIGKLKKGVLIVNNARGA-IMERQAVV 267 (351)
T ss_dssp SHHHHHHSCTTEEEEECSCGG-GBCHHHHH
T ss_pred cHHHHhcCCCCCEEEECcCch-hhCHHHHH
Confidence 999999999999999999974 35555554
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.23 E-value=3.6e-11 Score=129.59 Aligned_cols=101 Identities=14% Similarity=0.166 Sum_probs=73.9
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
..++.|||+||++ ++. ..|..+++ | ..+|+|+++|+||++.+.....+...++.|+...++ ...+..+++
T Consensus 19 ~~~~~lv~lhg~~---~~~--~~~~~~~~-l-~~~~~v~~~d~~G~~~~~~~~~~~~~~~~~~~~~i~---~~~~~~~~~ 88 (265)
T 3ils_A 19 VARKTLFMLPDGG---GSA--FSYASLPR-L-KSDTAVVGLNCPYARDPENMNCTHGAMIESFCNEIR---RRQPRGPYH 88 (265)
T ss_dssp TSSEEEEEECCTT---CCG--GGGTTSCC-C-SSSEEEEEEECTTTTCGGGCCCCHHHHHHHHHHHHH---HHCSSCCEE
T ss_pred CCCCEEEEECCCC---CCH--HHHHHHHh-c-CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH---HhCCCCCEE
Confidence 3567899999974 332 24667777 6 568999999999998776544444445555544444 433445899
Q ss_pred EEEechhHHHHHHHHH---hcCCcCCccEEEEEccC
Q psy15208 111 LAGFSFGTFVQAKLQK---RLDKEISIKILILISVA 143 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~---~~p~~~~V~gLVli~p~ 143 (1027)
|+||||||.+|+.+|. .+|+ +++++|++++.
T Consensus 89 l~GhS~Gg~ia~~~a~~l~~~~~--~v~~lvl~~~~ 122 (265)
T 3ils_A 89 LGGWSSGGAFAYVVAEALVNQGE--EVHSLIIIDAP 122 (265)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTC--CEEEEEEESCC
T ss_pred EEEECHhHHHHHHHHHHHHhCCC--CceEEEEEcCC
Confidence 9999999999999998 5555 69999999864
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.21 E-value=2e-10 Score=131.58 Aligned_cols=125 Identities=16% Similarity=0.176 Sum_probs=81.8
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCCh----HHHHHHHHHHH-hCCcEEEEEcCCCCCCCCCCCCCc---c
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDN----KVVQTLVRVML-SLGYISIRMNFRGVGASSGTYDSG---N 87 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~----~~~~~la~~La-~~Gy~Vla~DlrGhG~S~g~~~~~---~ 87 (1027)
.+.+.++.|.+. .++.|+|++.||... +....- .....++..|+ ++||.|+++|+||+|.|.+....+ .
T Consensus 59 ~~~g~l~~P~~~--~~~~PvV~~~HG~~~-~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~~~~~~~ 135 (377)
T 4ezi_A 59 IASGLVAMPIHP--VGQVGIISYQHGTRF-ERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTLHPYVQAE 135 (377)
T ss_dssp EEEEEEEEESSC--SSCEEEEEEECCCCC-STTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSSCCTTCHH
T ss_pred EEEEEEEECCCC--CCCCcEEEEeCCCcC-CcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCCcccccch
Confidence 478889999872 257899999999752 111100 00124566788 999999999999999998622222 1
Q ss_pred chHHHHHHHHHH---HHHhC---CCCcEEEEEechhHHHHHHHHHhcCC---cCCccEEEEEccC
Q psy15208 88 GETDDMEILLRY---IQKKY---PYLPIILAGFSFGTFVQAKLQKRLDK---EISIKILILISVA 143 (1027)
Q Consensus 88 ~~~~Dv~avl~~---L~~~~---~~~pviLVGhSmGG~vAl~~A~~~p~---~~~V~gLVli~p~ 143 (1027)
....++...++. +.... +..+++++||||||.+++.+|..+|+ +..+.+.+..+++
T Consensus 136 ~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p 200 (377)
T 4ezi_A 136 TLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAP 200 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCC
T ss_pred hHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcc
Confidence 222232222222 22222 23579999999999999999987654 2358888888863
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.20 E-value=6.7e-11 Score=143.05 Aligned_cols=136 Identities=17% Similarity=0.067 Sum_probs=107.6
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHH-HHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLV-RVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la-~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
..+.+.|+++|| +|++.+|.|++ .++.|+||++||++...+ ....|...+ +.|+++||.|+.+|+||+|.|.+
T Consensus 8 ~~~~v~i~~~DG~~L~~~~~~P~~---~~~~P~vv~~~~~g~~~~--~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g 82 (587)
T 3i2k_A 8 VASNVMVPMRDGVRLAVDLYRPDA---DGPVPVLLVRNPYDKFDV--FAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEG 82 (587)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECC---SSCEEEEEEEESSCTTCH--HHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEEEEEEECCCCCEEEEEEEECCC---CCCeeEEEEECCcCCCcc--ccccchhhHHHHHHHCCCEEEEEcCCCCCCCCC
Confidence 346788999999 79999999976 246899999998743211 000111134 88999999999999999999998
Q ss_pred CCCCccchHHHHHHHHHHHHHhC-CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC-CCc
Q psy15208 82 TYDSGNGETDDMEILLRYIQKKY-PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA-VKK 146 (1027)
Q Consensus 82 ~~~~~~~~~~Dv~avl~~L~~~~-~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~-~~~ 146 (1027)
.+..+....+|+.++++|+..+. ...+++++||||||.+++.+|..+|+ .++++|+.++. ...
T Consensus 83 ~~~~~~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~--~l~a~v~~~~~~~d~ 147 (587)
T 3i2k_A 83 EFVPHVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVG--GLKAIAPSMASADLY 147 (587)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCT--TEEEBCEESCCSCTC
T ss_pred ccccccchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCC--ccEEEEEeCCccccc
Confidence 77656678999999999998652 23479999999999999999999887 79999999887 543
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.7e-11 Score=138.91 Aligned_cols=103 Identities=21% Similarity=0.301 Sum_probs=87.8
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.||+|+|+|+|.||+.+|++++++|++|+++|+++ ....+...|++.. +++++++++|+|+.++. +.+++
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li 233 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGREN-SKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSII 233 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHH-HHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCB
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCC-CHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhh
Confidence 457899999999999999999999999999999998876 4455677899877 89999999999998764 56899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.+.|+.||+|+++||+|.... +|.+.|.
T Consensus 234 ~~~~l~~mk~gailIN~aRg~~-vd~~aL~ 262 (352)
T 3gg9_A 234 TVADLTRMKPTALFVNTSRAEL-VEENGMV 262 (352)
T ss_dssp CHHHHTTSCTTCEEEECSCGGG-BCTTHHH
T ss_pred CHHHHhhCCCCcEEEECCCchh-hcHHHHH
Confidence 9999999999999999999743 4444443
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=9.4e-11 Score=130.78 Aligned_cols=104 Identities=11% Similarity=0.034 Sum_probs=80.5
Q ss_pred CccEEEEECCCCCCCCCCChHHHH-HHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQ-TLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~-~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
.++.|||+||++ ++. ...|. .+++.|.++||+|+++|+||||.+. ......++...++.+....+..+++
T Consensus 64 ~~~pVVLvHG~~---~~~-~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~-----~~~~~~~la~~I~~l~~~~g~~~v~ 134 (316)
T 3icv_A 64 VSKPILLVPGTG---TTG-PQSFDSNWIPLSAQLGYTPCWISPPPFMLND-----TQVNTEYMVNAITTLYAGSGNNKLP 134 (316)
T ss_dssp CSSEEEEECCTT---CCH-HHHHTTTHHHHHHHTTCEEEEECCTTTTCSC-----HHHHHHHHHHHHHHHHHHTTSCCEE
T ss_pred CCCeEEEECCCC---CCc-HHHHHHHHHHHHHHCCCeEEEecCCCCCCCc-----HHHHHHHHHHHHHHHHHHhCCCceE
Confidence 456789999973 222 12466 7999999999999999999999754 2235677777888887776767899
Q ss_pred EEEechhHHHHHHHHHhcCC-cCCccEEEEEccCC
Q psy15208 111 LAGFSFGTFVQAKLQKRLDK-EISIKILILISVAV 144 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~-~~~V~gLVli~p~~ 144 (1027)
|+||||||.++..++..+|. ..+|+++|+++++.
T Consensus 135 LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~ 169 (316)
T 3icv_A 135 VLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 169 (316)
T ss_dssp EEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred EEEECHHHHHHHHHHHhccccchhhceEEEECCCC
Confidence 99999999999877776541 12799999999864
|
| >2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=2e-11 Score=137.73 Aligned_cols=102 Identities=19% Similarity=0.190 Sum_probs=86.6
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccC
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
.+..+.||+|+|+|+|.||+.+|++++++|++|+++|+++.. +...++...++++++.++|+|+.+++ +.+++
T Consensus 142 ~~~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~---~~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li 218 (343)
T 2yq5_A 142 ISNEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNP---EFEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMI 218 (343)
T ss_dssp CBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCG---GGTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCB
T ss_pred CccccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhh---hhhccccccCHHHHHhcCCEEEEcCCCCHHHHHHh
Confidence 355789999999999999999999999999999999998754 23345677799999999999998775 56899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.+.|+.||+|+++||+|.... +|.+.|.
T Consensus 219 ~~~~l~~mk~gailIN~aRg~~-vd~~aL~ 247 (343)
T 2yq5_A 219 GEKQLKEMKKSAYLINCARGEL-VDTGALI 247 (343)
T ss_dssp CHHHHHHSCTTCEEEECSCGGG-BCHHHHH
T ss_pred hHHHHhhCCCCcEEEECCCChh-hhHHHHH
Confidence 9999999999999999999743 4555554
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.18 E-value=4.4e-11 Score=134.72 Aligned_cols=103 Identities=17% Similarity=0.137 Sum_probs=88.0
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++.. ..+...|++..+++++++++|+|+.+++ +.++++
T Consensus 160 ~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 238 (335)
T 2g76_A 160 GTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP-EVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLN 238 (335)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBC
T ss_pred CcCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhC
Confidence 45789999999999999999999999999999999988755 3566778887899999999999998764 457899
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++.|+.||+|++++|+|.... +|.+.+.
T Consensus 239 ~~~l~~mk~gailIN~arg~v-vd~~aL~ 266 (335)
T 2g76_A 239 DNTFAQCKKGVRVVNCARGGI-VDEGALL 266 (335)
T ss_dssp HHHHTTSCTTEEEEECSCTTS-BCHHHHH
T ss_pred HHHHhhCCCCcEEEECCCccc-cCHHHHH
Confidence 889999999999999999743 4544443
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.18 E-value=3.4e-11 Score=134.23 Aligned_cols=103 Identities=24% Similarity=0.324 Sum_probs=88.7
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++.. ..+...|++..++++++.++|+|+.+++ +.++++
T Consensus 137 ~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~ 215 (307)
T 1wwk_A 137 GIELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLIN 215 (307)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBC
T ss_pred CcccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcC
Confidence 45789999999999999999999999999999999998866 4566778888899999999999998865 568899
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.+.|+.||+|++++|+|... -+|...+.
T Consensus 216 ~~~l~~mk~ga~lin~arg~-~vd~~aL~ 243 (307)
T 1wwk_A 216 EERLKLMKKTAILINTSRGP-VVDTNALV 243 (307)
T ss_dssp HHHHHHSCTTCEEEECSCGG-GBCHHHHH
T ss_pred HHHHhcCCCCeEEEECCCCc-ccCHHHHH
Confidence 88899999999999999963 34544443
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.16 E-value=4.6e-11 Score=133.46 Aligned_cols=103 Identities=22% Similarity=0.266 Sum_probs=88.8
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++.+. .+...|+...++++++.++|+|+.+++ +.++++
T Consensus 137 ~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~ 215 (313)
T 2ekl_A 137 GLELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIID 215 (313)
T ss_dssp CCCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBC
T ss_pred CCCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhC
Confidence 457899999999999999999999999999999999988654 466778887789999999999998875 568898
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++.++.||+|++++|+|..+ -+|...+.
T Consensus 216 ~~~l~~mk~ga~lIn~arg~-~vd~~aL~ 243 (313)
T 2ekl_A 216 YPQFELMKDNVIIVNTSRAV-AVNGKALL 243 (313)
T ss_dssp HHHHHHSCTTEEEEESSCGG-GBCHHHHH
T ss_pred HHHHhcCCCCCEEEECCCCc-ccCHHHHH
Confidence 88899999999999999963 35544444
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.9e-10 Score=127.11 Aligned_cols=134 Identities=17% Similarity=0.163 Sum_probs=101.0
Q ss_pred CccceEeecccccccccccchhhhhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA 849 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A 849 (1027)
..++|.+..+.. +-..-|...+.+..+..+....+..+.|++|+|+|+|.||+.+|+.++++|++|+++|+++.+...+
T Consensus 116 ~gi~v~~~~~~~-~~~~~~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~ 194 (293)
T 3d4o_A 116 TNRTLVKLMERD-DIAIYNSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARI 194 (293)
T ss_dssp HTCEEEEGGGCH-HHHHHHHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred cCCeEEEecCCc-eeeeeccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 456777655310 0000122334455554444444667899999999999999999999999999999999998776656
Q ss_pred hhcCcEEc---CHHHHhccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccch
Q psy15208 850 AMEGFLVV---TMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEV 905 (1027)
Q Consensus 850 ~~~G~~v~---~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~ 905 (1027)
...|+++. ++++.+.++|+|+.|++. ++++.+.++.||++++++|++..+.++++
T Consensus 195 ~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-~~i~~~~l~~mk~~~~lin~ar~~~~~~~ 252 (293)
T 3d4o_A 195 AEMGMEPFHISKAAQELRDVDVCINTIPA-LVVTANVLAEMPSHTFVIDLASKPGGTDF 252 (293)
T ss_dssp HHTTSEEEEGGGHHHHTTTCSEEEECCSS-CCBCHHHHHHSCTTCEEEECSSTTCSBCH
T ss_pred HHCCCeecChhhHHHHhcCCCEEEECCCh-HHhCHHHHHhcCCCCEEEEecCCCCCCCH
Confidence 66787753 577888999999999965 67888899999999999999987655555
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.7e-10 Score=126.31 Aligned_cols=111 Identities=17% Similarity=0.206 Sum_probs=91.1
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE---cCHHHHhccCCEEE
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV---VTMEYAKKYGDIFV 870 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v---~~~~e~l~~aDvvi 870 (1027)
++.|....+..+..+.|++|+|+|+|.||+.+|+.++++|++|+++|+++.+...+...|+++ .++++.+.++|+||
T Consensus 141 ~g~~~~~~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi 220 (300)
T 2rir_A 141 EGTIMLAIQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICI 220 (300)
T ss_dssp HHHHHHHHHTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEE
T ss_pred HHHHHHHHHhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEE
Confidence 445543323345679999999999999999999999999999999999987665555567764 46788889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCCCcccch
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEV 905 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~ 905 (1027)
.+++. ++++.+.++.||++++++|++..+...++
T Consensus 221 ~~~p~-~~i~~~~~~~mk~g~~lin~a~g~~~~~~ 254 (300)
T 2rir_A 221 NTIPS-MILNQTVLSSMTPKTLILDLASRPGGTDF 254 (300)
T ss_dssp ECCSS-CCBCHHHHTTSCTTCEEEECSSTTCSBCH
T ss_pred ECCCh-hhhCHHHHHhCCCCCEEEEEeCCCCCcCH
Confidence 99976 67888899999999999999987655544
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=99.13 E-value=9.8e-11 Score=133.44 Aligned_cols=104 Identities=16% Similarity=0.163 Sum_probs=88.3
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCC----Cccc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTG----NYHV 878 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG----~~~v 878 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++ |+++|+++.....+...|+... +++++++++|+|+.+++ +.++
T Consensus 159 ~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~l 238 (364)
T 2j6i_A 159 AYDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGL 238 (364)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTC
T ss_pred cccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHH
Confidence 5579999999999999999999999999997 9999988766666667788754 89999999999998875 3489
Q ss_pred CcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++.+.|+.||+|+++||+|... -+|.+.|.
T Consensus 239 i~~~~l~~mk~ga~lIn~arG~-~vd~~aL~ 268 (364)
T 2j6i_A 239 INKELLSKFKKGAWLVNTARGA-ICVAEDVA 268 (364)
T ss_dssp BCHHHHTTSCTTEEEEECSCGG-GBCHHHHH
T ss_pred hCHHHHhhCCCCCEEEECCCCc-hhCHHHHH
Confidence 9999999999999999999963 34545444
|
| >1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=99.13 E-value=7.1e-11 Score=133.09 Aligned_cols=102 Identities=21% Similarity=0.266 Sum_probs=85.2
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccC
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
.+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++... + ..++...+++++++++|+|+.+++ +.+++
T Consensus 139 ~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li 215 (333)
T 1dxy_A 139 IGKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-HPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHII 215 (333)
T ss_dssp CCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-CTTCEECCHHHHHHHCSEEEECCCCCGGGTTSB
T ss_pred CccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-HhccccCCHHHHHhcCCEEEEcCCCchhHHHHh
Confidence 3567999999999999999999999999999999999887543 2 223566789999999999998875 45789
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.+.|+.||+|++++|+|.... +|.+.|.
T Consensus 216 ~~~~l~~mk~ga~lIn~srg~~-vd~~aL~ 244 (333)
T 1dxy_A 216 NEAAFNLMKPGAIVINTARPNL-IDTQAML 244 (333)
T ss_dssp CHHHHHHSCTTEEEEECSCTTS-BCHHHHH
T ss_pred CHHHHhhCCCCcEEEECCCCcc-cCHHHHH
Confidence 9999999999999999999743 4555554
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.4e-11 Score=136.17 Aligned_cols=103 Identities=17% Similarity=0.223 Sum_probs=83.3
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++.... ....++...+++++++++|+|+.+++ +.++++
T Consensus 135 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~ 213 (324)
T 3hg7_A 135 YQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERA-GFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFT 213 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCT-TCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBC
T ss_pred CcccccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhh-hhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhH
Confidence 5579999999999999999999999999999999998873322 11222334679999999999998764 468999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.+.|+.||+|+++||+|.... +|.+.|.
T Consensus 214 ~~~l~~mk~gailIN~aRG~~-vde~aL~ 241 (324)
T 3hg7_A 214 ASRFEHCKPGAILFNVGRGNA-INEGDLL 241 (324)
T ss_dssp TTTTTCSCTTCEEEECSCGGG-BCHHHHH
T ss_pred HHHHhcCCCCcEEEECCCchh-hCHHHHH
Confidence 999999999999999999743 4545444
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.2e-10 Score=133.58 Aligned_cols=104 Identities=10% Similarity=0.072 Sum_probs=88.2
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++.....+...|+.. .+++++++++|+|+.++. +.+++
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li 265 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMI 265 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCB
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHh
Confidence 4578999999999999999999999999999999998876556666778875 579999999999998764 46899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.+.|+.||+|++|||+|... -+|.+.+.
T Consensus 266 ~~~~l~~mk~gailIN~aRG~-~vde~aL~ 294 (393)
T 2nac_A 266 NDETLKLFKRGAYIVNTARGK-LCDRDAVA 294 (393)
T ss_dssp SHHHHTTSCTTEEEEECSCGG-GBCHHHHH
T ss_pred hHHHHhhCCCCCEEEECCCch-HhhHHHHH
Confidence 989999999999999999863 34544444
|
| >3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.12 E-value=1e-10 Score=133.27 Aligned_cols=103 Identities=18% Similarity=0.196 Sum_probs=85.1
Q ss_pred hhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC-------
Q psy15208 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG------- 874 (1027)
Q Consensus 802 r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG------- 874 (1027)
|..+..+.||+|+|+|+|.||+.+|++++++|++|+++|+.+ . ....+....+++++++++|+|+.+++
T Consensus 111 r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~--~--~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~ 186 (381)
T 3oet_A 111 ERDGFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPR--A--ARGDEGDFRTLDELVQEADVLTFHTPLYKDGPY 186 (381)
T ss_dssp HHTTCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHH--H--HTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTT
T ss_pred HhcCCccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCh--H--HhccCcccCCHHHHHhhCCEEEEcCcCCccccc
Confidence 334667999999999999999999999999999999996532 2 12245567889999999999998774
Q ss_pred -CcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 875 -NYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 875 -~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.++++.+.|+.||+|+++||+|.... +|.+.|.
T Consensus 187 ~T~~li~~~~l~~mk~gailIN~aRG~v-vde~aL~ 221 (381)
T 3oet_A 187 KTLHLADETLIRRLKPGAILINACRGPV-VDNAALL 221 (381)
T ss_dssp CCTTSBCHHHHHHSCTTEEEEECSCGGG-BCHHHHH
T ss_pred cchhhcCHHHHhcCCCCcEEEECCCCcc-cCHHHHH
Confidence 778999999999999999999999743 5555554
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.8e-11 Score=135.71 Aligned_cols=103 Identities=19% Similarity=0.241 Sum_probs=83.9
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.||+|+|+|+|.||+.+|++++++|++|+++|+++..... ....+...+++++++++|+|+.++. +.++++
T Consensus 132 ~~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~ 210 (324)
T 3evt_A 132 TSTLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADH-FHETVAFTATADALATANFIVNALPLTPTTHHLFS 210 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTT-CSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBS
T ss_pred CccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHh-HhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcC
Confidence 56799999999999999999999999999999999988754321 1222344578999999999998764 468999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.+.|+.||+|+++||+|.... +|.+.|.
T Consensus 211 ~~~l~~mk~gailIN~aRG~~-vd~~aL~ 238 (324)
T 3evt_A 211 TELFQQTKQQPMLINIGRGPA-VDTTALM 238 (324)
T ss_dssp HHHHHTCCSCCEEEECSCGGG-BCHHHHH
T ss_pred HHHHhcCCCCCEEEEcCCChh-hhHHHHH
Confidence 999999999999999999743 4545444
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.11 E-value=1.2e-09 Score=119.25 Aligned_cols=129 Identities=9% Similarity=-0.011 Sum_probs=84.7
Q ss_pred ceEEEEEecC-Cc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHH---HHHHHHhCCcEEEEEcCCCCC-
Q psy15208 4 NTKFFNINGS-VG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQT---LVRVMLSLGYISIRMNFRGVG- 77 (1027)
Q Consensus 4 ~~~~i~I~t~-dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~---la~~La~~Gy~Vla~DlrGhG- 77 (1027)
+.+.+.+.++ .| .+.+. +.|++ .|+|+|+||++. +++.. .|.. +.+.+++.|+.|+++|.++.+
T Consensus 10 ~~~~~~~~S~~~~~~~~~~-~~P~~------~p~vvllHG~~~-~~~~~--~w~~~~~~~~~~~~~~~~vv~pd~~~~~~ 79 (280)
T 1r88_A 10 PYENLMVPSPSMGRDIPVA-FLAGG------PHAVYLLDAFNA-GPDVS--NWVTAGNAMNTLAGKGISVVAPAGGAYSM 79 (280)
T ss_dssp CCEEEEEEETTTTEEEEEE-EECCS------SSEEEEECCSSC-CSSSC--HHHHTSCHHHHHTTSSSEEEEECCCTTST
T ss_pred CEEEEEEECcccCCcceEE-EeCCC------CCEEEEECCCCC-CCChh--hhhhcccHHHHHhcCCeEEEEECCCCCCc
Confidence 4456777765 34 66666 67765 279999999742 12222 2433 567788889999999997642
Q ss_pred CCCCCCCCccchHH-HHHHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 78 ASSGTYDSGNGETD-DMEILLRYIQKKYPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 78 ~S~g~~~~~~~~~~-Dv~avl~~L~~~~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
.+............ -+..+..++...++.+ +++|+||||||.+|+.++.++|+ ++++++++++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~--~~~~~v~~sg~~ 147 (280)
T 1r88_A 80 YTNWEQDGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPD--RFGFAGSMSGFL 147 (280)
T ss_dssp TSBCSSCTTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTT--TEEEEEEESCCC
T ss_pred cCCCCCCCCCcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCcc--ceeEEEEECCcc
Confidence 22211111011111 1234555555545543 79999999999999999999999 799999999864
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=99.10 E-value=1.1e-10 Score=130.68 Aligned_cols=103 Identities=14% Similarity=0.173 Sum_probs=87.1
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcC-CchhHHHHhhcCcEEc-CHHHHhccCCEEEecCC----Cccc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEI-DPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTG----NYHV 878 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~-dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG----~~~v 878 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+ ++.. ..+...|+... ++++++.++|+|+.++. +.++
T Consensus 141 ~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~ 219 (320)
T 1gdh_A 141 GEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASS-SDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYF 219 (320)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTC
T ss_pred CcCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhh
Confidence 4468999999999999999999999999999999999 8765 35666788877 89999999999998875 5678
Q ss_pred CcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++++.|+.||+|++++|+|... -+|...+.
T Consensus 220 i~~~~l~~mk~gailIn~arg~-~vd~~aL~ 249 (320)
T 1gdh_A 220 FNKATIKSLPQGAIVVNTARGD-LVDNELVV 249 (320)
T ss_dssp BSHHHHTTSCTTEEEEECSCGG-GBCHHHHH
T ss_pred cCHHHHhhCCCCcEEEECCCCc-ccCHHHHH
Confidence 9888899999999999999963 34544443
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.09 E-value=2.9e-10 Score=122.48 Aligned_cols=151 Identities=14% Similarity=0.091 Sum_probs=95.9
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh--CCcEEEEEcCCCCCC---------CC----
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS--LGYISIRMNFRGVGA---------SS---- 80 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~--~Gy~Vla~DlrGhG~---------S~---- 80 (1027)
.+.+.+..|.+ +.+++|||+||+|..+.. |..+++.|.. .++.+++|+-|-... +.
T Consensus 24 ~l~y~ii~P~~----~~~~~VI~LHG~G~~~~d-----l~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~ 94 (246)
T 4f21_A 24 AMNYELMEPAK----QARFCVIWLHGLGADGHD-----FVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIK 94 (246)
T ss_dssp CCCEEEECCSS----CCCEEEEEEEC--CCCCC-----GGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCC
T ss_pred CcCceEeCCCC----cCCeEEEEEcCCCCCHHH-----HHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccc
Confidence 35556677765 467899999998654332 3455665543 268889887642211 10
Q ss_pred -CCCC------Ccc---chHHHHHHHHHHHHH-hCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC--
Q psy15208 81 -GTYD------SGN---GETDDMEILLRYIQK-KYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW-- 147 (1027)
Q Consensus 81 -g~~~------~~~---~~~~Dv~avl~~L~~-~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~-- 147 (1027)
.... +.+ .....+..+++.... ..+..+++|.|+||||.+++.++.++|+ ++++++.+++..+..
T Consensus 95 ~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~--~~a~~i~~sG~lp~~~~ 172 (246)
T 4f21_A 95 SLDANSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQR--KLGGIMALSTYLPAWDN 172 (246)
T ss_dssp CC---CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSS--CCCEEEEESCCCTTHHH
T ss_pred cccccchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCcc--ccccceehhhccCcccc
Confidence 0000 111 122333334433322 2344579999999999999999999998 799999999865432
Q ss_pred ---C--CCCCCCcEEEEEeCCCCCCChHHHHhhhC
Q psy15208 148 ---L--IPEVPKNTIIIHGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 148 ---~--l~~i~~PvLiIhG~~D~iVP~~~~~~l~~ 177 (1027)
. ...-..|++++||++|++||++.++...+
T Consensus 173 ~~~~~~~~~~~~Pvl~~HG~~D~vVp~~~~~~~~~ 207 (246)
T 4f21_A 173 FKGKITSINKGLPILVCHGTDDQVLPEVLGHDLSD 207 (246)
T ss_dssp HSTTCCGGGTTCCEEEEEETTCSSSCHHHHHHHHH
T ss_pred ccccccccccCCchhhcccCCCCccCHHHHHHHHH
Confidence 1 11235799999999999999998775544
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.09 E-value=8.8e-11 Score=131.57 Aligned_cols=108 Identities=11% Similarity=0.058 Sum_probs=81.3
Q ss_pred CCccEEEEECCCCCCCCCCCh-HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDN-KVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~-~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
+.+++|||+||++.....+.. ..|..+++.|.++||.|+++|+||+|.|.....+...+.+++..+++.+ +..++
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~~~~~~~l~~~i~~~l~~~----~~~~v 81 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPNGRGEQLLAYVKTVLAAT----GATKV 81 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSSTTSHHHHHHHHHHHHHHHH----CCSCE
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCCE
Confidence 356789999997533211100 2467899999999999999999999999754333344555555554443 44589
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
+|+||||||.+++.++.++|+ +++++|+++++.
T Consensus 82 ~lvGHS~GG~va~~~a~~~p~--~V~~lV~i~~p~ 114 (320)
T 1ys1_X 82 NLVGHSQGGLTSRYVAAVAPD--LVASVTTIGTPH 114 (320)
T ss_dssp EEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCT
T ss_pred EEEEECHhHHHHHHHHHhChh--hceEEEEECCCC
Confidence 999999999999999999988 799999999864
|
| >4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.4e-10 Score=130.77 Aligned_cols=99 Identities=14% Similarity=0.262 Sum_probs=75.1
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.||+++|+|+|.||+.+|++++++|++|+++|+++.+ ..++. ..+++++++++|+|+.++. +.+++
T Consensus 166 ~~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~-----~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li 240 (340)
T 4dgs_A 166 GHSPKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS-----GVDWIAHQSPVDLARDSDVLAVCVAASAATQNIV 240 (340)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT-----TSCCEECSSHHHHHHTCSEEEECC----------
T ss_pred cccccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc-----ccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHh
Confidence 45799999999999999999999999999999999988754 23444 4589999999999998865 56899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+++.|+.||+|+++||++.... +|.+.+.
T Consensus 241 ~~~~l~~mk~gailIN~aRG~v-vde~aL~ 269 (340)
T 4dgs_A 241 DASLLQALGPEGIVVNVARGNV-VDEDALI 269 (340)
T ss_dssp CHHHHHHTTTTCEEEECSCC----------
T ss_pred hHHHHhcCCCCCEEEECCCCcc-cCHHHHH
Confidence 9999999999999999999854 4545444
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.08 E-value=7.7e-10 Score=122.74 Aligned_cols=137 Identities=11% Similarity=0.066 Sum_probs=97.9
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCC-----CCCCCCccchHHHHHHHHHHHHHhCCCCcE
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGAS-----SGTYDSGNGETDDMEILLRYIQKKYPYLPI 109 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S-----~g~~~~~~~~~~Dv~avl~~L~~~~~~~pv 109 (1027)
.++++||++. +++. ..|..+++.|. .+|.|+++|+||+|.| .....+...++.|+...++. ..+..|+
T Consensus 91 ~l~~~hg~g~-~~~~--~~~~~l~~~L~-~~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~---~~~~~p~ 163 (319)
T 2hfk_A 91 VLVGCTGTAA-NGGP--HEFLRLSTSFQ-EERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILR---AAGDAPV 163 (319)
T ss_dssp EEEEECCCCT-TCST--TTTHHHHHTTT-TTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHH---HHTTSCE
T ss_pred cEEEeCCCCC-CCcH--HHHHHHHHhcC-CCCceEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHH---hcCCCCE
Confidence 7899998321 2222 24778888886 5899999999999998 43323444455555444433 3345589
Q ss_pred EEEEechhHHHHHHHHHhcCC--cCCccEEEEEccCCCc-----------------------------------------
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDK--EISIKILILISVAVKK----------------------------------------- 146 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~--~~~V~gLVli~p~~~~----------------------------------------- 146 (1027)
+|+||||||.+|+.+|.++++ ...+++++++++..+.
T Consensus 164 ~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (319)
T 2hfk_A 164 VLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARFLAG 243 (319)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHS
T ss_pred EEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccccchHHHHHHHHHHHHHHh
Confidence 999999999999999998753 1269999999875321
Q ss_pred CCCCCCCCcEEEEEeCCCCCCChHH-HHhhhCCC
Q psy15208 147 WLIPEVPKNTIIIHGELDEIIPLKD-VFLWANPL 179 (1027)
Q Consensus 147 ~~l~~i~~PvLiIhG~~D~iVP~~~-~~~l~~~~ 179 (1027)
+....+.+|+++++| +|..+|+.. ...|.+..
T Consensus 244 ~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~ 276 (319)
T 2hfk_A 244 PRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHW 276 (319)
T ss_dssp CCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCC
T ss_pred CCCCCcCCCEEEEEc-CCCCCCccccccchhhcC
Confidence 123567899999999 999998876 55665543
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.08 E-value=1.2e-09 Score=120.43 Aligned_cols=130 Identities=6% Similarity=-0.101 Sum_probs=83.8
Q ss_pred eEEEEEecCCc--eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHH---HHHHHHhCCcEEEEEcCCCCC-C
Q psy15208 5 TKFFNINGSVG--ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQT---LVRVMLSLGYISIRMNFRGVG-A 78 (1027)
Q Consensus 5 ~~~i~I~t~dG--~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~---la~~La~~Gy~Vla~DlrGhG-~ 78 (1027)
.+.+.+.++.. ++.++ +.|.. ++.|+|+|+||++. +++.. .|.. +.+.+++.|+.|+++|.++.. .
T Consensus 9 v~~~~~~S~~~~~~i~v~-~~p~~----~~~p~vvllHG~~~-~~~~~--~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~ 80 (304)
T 1sfr_A 9 VEYLQVPSPSMGRDIKVQ-FQSGG----ANSPALYLLDGLRA-QDDFS--GWDINTPAFEWYDQSGLSVVMPVGGQSSFY 80 (304)
T ss_dssp CEEEEEEETTTTEEEEEE-EECCS----TTBCEEEEECCTTC-CSSSC--HHHHHCCHHHHHTTSSCEEEEECCCTTCTT
T ss_pred EEEEEEECccCCCceEEE-ECCCC----CCCCEEEEeCCCCC-CCCcc--hhhcCCCHHHHHhcCCeEEEEECCCCCccc
Confidence 45566776543 56665 44543 46899999999732 12222 2433 456677789999999997652 2
Q ss_pred CCCCCCC-------ccchHHHH-HHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 79 SSGTYDS-------GNGETDDM-EILLRYIQKKYPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 79 S~g~~~~-------~~~~~~Dv-~avl~~L~~~~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
+...... ...+...+ ..++.++...++.. +++|+||||||.+|+.++.++|+ ++++++++++..
T Consensus 81 ~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~--~~~~~v~~sg~~ 154 (304)
T 1sfr_A 81 SDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQ--QFVYAGAMSGLL 154 (304)
T ss_dssp CBCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTT--TEEEEEEESCCS
T ss_pred cccCCccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCcc--ceeEEEEECCcc
Confidence 2111100 11122222 34555555544433 79999999999999999999999 799999998864
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=99.07 E-value=4.3e-11 Score=133.75 Aligned_cols=99 Identities=13% Similarity=0.111 Sum_probs=82.1
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-E---cCHHHHhccCCEEEecCC----Cc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-V---VTMEYAKKYGDIFVTCTG----NY 876 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v---~~~~e~l~~aDvvi~atG----~~ 876 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++... .++. . .+++++++++|+|+.++. +.
T Consensus 134 ~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~-----~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~ 208 (315)
T 3pp8_A 134 EYTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSW-----PGVESYVGREELRAFLNQTRVLINLLPNTAQTV 208 (315)
T ss_dssp CCCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCC-----TTCEEEESHHHHHHHHHTCSEEEECCCCCGGGT
T ss_pred CCCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhh-----hhhhhhcccCCHHHHHhhCCEEEEecCCchhhh
Confidence 557899999999999999999999999999999999887532 2332 1 478899999999998765 56
Q ss_pred ccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++++.+.|+.||+|+++||+|.... +|.+.|.
T Consensus 209 ~li~~~~l~~mk~gailIN~aRG~~-vd~~aL~ 240 (315)
T 3pp8_A 209 GIINSELLDQLPDGAYVLNLARGVH-VQEADLL 240 (315)
T ss_dssp TCBSHHHHTTSCTTEEEEECSCGGG-BCHHHHH
T ss_pred hhccHHHHhhCCCCCEEEECCCChh-hhHHHHH
Confidence 8999999999999999999999743 4544444
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=7.9e-10 Score=119.92 Aligned_cols=128 Identities=7% Similarity=-0.076 Sum_probs=79.7
Q ss_pred eEEEEEecCCc--eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHH---HHHHHHhCCcEEEEEcCCCCC-C
Q psy15208 5 TKFFNINGSVG--ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQT---LVRVMLSLGYISIRMNFRGVG-A 78 (1027)
Q Consensus 5 ~~~i~I~t~dG--~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~---la~~La~~Gy~Vla~DlrGhG-~ 78 (1027)
.+.+.+.++.. ++.++ .|++. .++|+|+||++. +++.. .|.. +.+.+++.|+.|+++|.+|.. .
T Consensus 6 ~~~~~~~s~~~~~~~~v~--~~p~~-----~~~v~llHG~~~-~~~~~--~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~ 75 (280)
T 1dqz_A 6 VEYLQVPSASMGRDIKVQ--FQGGG-----PHAVYLLDGLRA-QDDYN--GWDINTPAFEEYYQSGLSVIMPVGGQSSFY 75 (280)
T ss_dssp EEEEEEEETTTTEEEEEE--EECCS-----SSEEEECCCTTC-CSSSC--HHHHHSCHHHHHTTSSSEEEEECCCTTCTT
T ss_pred EEEEEEECcccCceeEEE--EcCCC-----CCEEEEECCCCC-CCCcc--cccccCcHHHHHhcCCeEEEEECCCCCccc
Confidence 34566665543 45554 34431 248999999742 11222 2433 346677789999999987542 2
Q ss_pred CCCCCC-------CccchHHHH-HHHHHHHHHhCCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 79 SSGTYD-------SGNGETDDM-EILLRYIQKKYPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 79 S~g~~~-------~~~~~~~Dv-~avl~~L~~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
+....+ ....+...+ ..+..++...++. .+++|+||||||.+|+.++.++|+ ++++++++++..
T Consensus 76 ~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~--~~~~~v~~sg~~ 149 (280)
T 1dqz_A 76 TDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQ--QFPYAASLSGFL 149 (280)
T ss_dssp SBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTT--TCSEEEEESCCC
T ss_pred cCCCCCCccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCc--hheEEEEecCcc
Confidence 221100 011222222 3455555553443 379999999999999999999999 799999998764
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.06 E-value=1.3e-10 Score=131.42 Aligned_cols=124 Identities=7% Similarity=0.015 Sum_probs=90.0
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCC-----ChHHH----HHHHHHHHhCCcE---EEEEcCCCCCCCCCCC
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTM-----DNKVV----QTLVRVMLSLGYI---SIRMNFRGVGASSGTY 83 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~-----~~~~~----~~la~~La~~Gy~---Vla~DlrGhG~S~g~~ 83 (1027)
..-+..+.|.. ..+++|||+||++.....+ ....| ..+++.|.++||. |+++|+||||.|....
T Consensus 27 s~gG~~~~p~~----~~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~ 102 (342)
T 2x5x_A 27 GYGGFGGGSCT----ATKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQ 102 (342)
T ss_dssp SSCEEECCSSC----CCSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGG
T ss_pred ccCcccCCCCC----CCCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCcc
Confidence 33344444443 2345689999985421100 11246 6789999999998 9999999999876431
Q ss_pred --CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhc--CCcCCccEEEEEccCCC
Q psy15208 84 --DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRL--DKEISIKILILISVAVK 145 (1027)
Q Consensus 84 --~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~--p~~~~V~gLVli~p~~~ 145 (1027)
.......+++...++.+....+..+++|+||||||.+++.++.++ |+ +|+++|+++++..
T Consensus 103 ~~~~~~~~~~~l~~~I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~--~V~~lVlla~p~~ 166 (342)
T 2x5x_A 103 YNYHSSTKYAIIKTFIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWT--SVRKFINLAGGIR 166 (342)
T ss_dssp GCCBCHHHHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGG--GEEEEEEESCCTT
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchh--hhcEEEEECCCcc
Confidence 123345777777777777666667899999999999999999998 77 7999999998754
|
| >1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.7e-10 Score=129.97 Aligned_cols=101 Identities=22% Similarity=0.266 Sum_probs=84.1
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++... + ..++...+++++++++|+|+.+++ +.++++
T Consensus 141 ~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~ 217 (331)
T 1xdw_A 141 SKEVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I-EDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVT 217 (331)
T ss_dssp CCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C-TTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBC
T ss_pred ccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H-HhccccCCHHHHHhhCCEEEEecCCchHHHHHhC
Confidence 457899999999999999999999999999999999887543 1 223566789999999999998754 468999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.+.|+.||+|++++|+|... -+|.+.|.
T Consensus 218 ~~~l~~mk~ga~lin~srg~-~vd~~aL~ 245 (331)
T 1xdw_A 218 RDFLKKMKDGAILVNCARGQ-LVDTEAVI 245 (331)
T ss_dssp HHHHHTSCTTEEEEECSCGG-GBCHHHHH
T ss_pred HHHHhhCCCCcEEEECCCcc-cccHHHHH
Confidence 99999999999999999863 34545454
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=8.6e-09 Score=113.66 Aligned_cols=156 Identities=12% Similarity=0.094 Sum_probs=103.8
Q ss_pred ceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCC--hHHHHHHHHHHHhCC----cEEEEEcCCCCC
Q psy15208 4 NTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMD--NKVVQTLVRVMLSLG----YISIRMNFRGVG 77 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~--~~~~~~la~~La~~G----y~Vla~DlrGhG 77 (1027)
+.+.+.+.+.++.+.+.+|.|++....++.|+|+++||++.....+. ...+..+++.|+++| +.|+++|.+|.
T Consensus 40 ~~~~~~~~s~~~~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~- 118 (297)
T 1gkl_A 40 RIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG- 118 (297)
T ss_dssp EEEEEEEEETTEEEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCST-
T ss_pred eEEEEEEEcCCCEEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCC-
Confidence 34567788888889999999986432356899999999754322221 112456788888775 99999998753
Q ss_pred CCCCCCCCccchHHH-HHHHHHHHHHhCCC--------------CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 78 ASSGTYDSGNGETDD-MEILLRYIQKKYPY--------------LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 78 ~S~g~~~~~~~~~~D-v~avl~~L~~~~~~--------------~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+... ..+ ..+ +..++.++...+.. .+++++|+||||.+++.++.++|+ ++++++++++
T Consensus 119 -~~~~-~~~---~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~--~f~~~v~~sg 191 (297)
T 1gkl_A 119 -NCTA-QNF---YQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLD--YVAYFMPLSG 191 (297)
T ss_dssp -TCCT-TTH---HHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTT--TCCEEEEESC
T ss_pred -ccch-HHH---HHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCch--hhheeeEecc
Confidence 2211 111 122 23455666655432 359999999999999999999999 7899999998
Q ss_pred CCCcC-----------------CCCCCCCcEEEEEeCCCCCC
Q psy15208 143 AVKKW-----------------LIPEVPKNTIIIHGELDEII 167 (1027)
Q Consensus 143 ~~~~~-----------------~l~~i~~PvLiIhG~~D~iV 167 (1027)
..... .+.....++++.+|++|...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~D~~~ 233 (297)
T 1gkl_A 192 DYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSEDIAY 233 (297)
T ss_dssp CCCBSSSHHHHHHHHHHHHHHHTCCTTSCEEEEEEETTCTTH
T ss_pred ccccCCccchhhhHHHHHHhhccCCcCcEEEEEEeCCCcccc
Confidence 64211 01122345566678888654
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=99.04 E-value=4.9e-10 Score=126.99 Aligned_cols=104 Identities=18% Similarity=0.180 Sum_probs=87.5
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHH-hCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCC----Cccc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMR-ALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTG----NYHV 878 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~-~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG----~~~v 878 (1027)
+..+.|++|+|+|+|.||+.+|++++ ++|++|+++|+++.+...+...|+... ++++++.++|+|+.++. +.++
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~l 237 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHL 237 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTC
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHH
Confidence 55799999999999999999999999 999999999998866555656688766 78999999999998875 4578
Q ss_pred CcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++.+.++.||++++|+|++.... +|.+.+.
T Consensus 238 i~~~~l~~mk~gailin~srg~~-vd~~aL~ 267 (348)
T 2w2k_A 238 IDEAFFAAMKPGSRIVNTARGPV-ISQDALI 267 (348)
T ss_dssp BCHHHHHHSCTTEEEEECSCGGG-BCHHHHH
T ss_pred hhHHHHhcCCCCCEEEECCCCch-hCHHHHH
Confidence 98888999999999999999743 3434443
|
| >1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=2.4e-10 Score=131.88 Aligned_cols=100 Identities=16% Similarity=0.221 Sum_probs=82.5
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.||+++|+|+|.||+.+|++++++|++|+++|+++... ..+++. .+++++++++|+|+.+++ +++++
T Consensus 140 ~~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li 215 (404)
T 1sc6_A 140 SFEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP----LGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMM 215 (404)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC----CTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCB
T ss_pred ccccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc----cCCceecCCHHHHHhcCCEEEEccCCChHHHHHh
Confidence 557999999999999999999999999999999998876432 123554 489999999999998764 56899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+++.|+.||+|++++|++... -+|.+.+.
T Consensus 216 ~~~~l~~mk~ga~lIN~aRg~-~vd~~aL~ 244 (404)
T 1sc6_A 216 GAKEISLMKPGSLLINASRGT-VVDIPALA 244 (404)
T ss_dssp CHHHHHHSCTTEEEEECSCSS-SBCHHHHH
T ss_pred hHHHHhhcCCCeEEEECCCCh-HHhHHHHH
Confidence 999999999999999999974 34444443
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=99.03 E-value=2.4e-10 Score=126.17 Aligned_cols=98 Identities=13% Similarity=0.225 Sum_probs=81.7
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCC----CcccCc
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
..+.|++|+|+|+|.||+.+|++++++|++|+++|+++.... .++.. +++++++++|+|+.+++ +.++++
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-----~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~ 192 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQN-----VDVISESPADLFRQSDFVLIAIPLTDKTRGMVN 192 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTT-----CSEECSSHHHHHHHCSEEEECCCCCTTTTTCBS
T ss_pred eeeecchheeeccCchhHHHHHHHHhhCcEEEEEeccccccc-----cccccCChHHHhhccCeEEEEeeccccchhhhh
Confidence 468999999999999999999999999999999998874432 24444 89999999999998765 467899
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.+.|+.||+|++++|+|.... +|.+.+.
T Consensus 193 ~~~l~~mk~gailIN~aRG~~-vd~~aL~ 220 (290)
T 3gvx_A 193 SRLLANARKNLTIVNVARADV-VSKPDMI 220 (290)
T ss_dssp HHHHTTCCTTCEEEECSCGGG-BCHHHHH
T ss_pred HHHHhhhhcCceEEEeehhcc-cCCcchh
Confidence 999999999999999998743 4444443
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.03 E-value=2.2e-10 Score=134.30 Aligned_cols=111 Identities=10% Similarity=0.105 Sum_probs=85.1
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHH-HHHHHHhC-CcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhC--
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQT-LVRVMLSL-GYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKKY-- 104 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~-la~~La~~-Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~~-- 104 (1027)
+.+|+|||+||++.. ... .|.. +++.|.++ ||+|+++|+||||.|.... .+.....+|+.++++++....
T Consensus 68 ~~~p~vvliHG~~~~---~~~-~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~~~~~~~~~~~dl~~~i~~L~~~~g~ 143 (452)
T 1w52_X 68 SSRKTHFVIHGFRDR---GED-SWPSDMCKKILQVETTNCISVDWSSGAKAEYTQAVQNIRIVGAETAYLIQQLLTELSY 143 (452)
T ss_dssp TTSCEEEEECCTTCC---SSS-SHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEEEcCCCCC---CCc-hHHHHHHHHHHhhCCCEEEEEecccccccccHHHHHhHHHHHHHHHHHHHHHHHhcCC
Confidence 346899999998542 211 2544 77888765 9999999999999986210 122346778889999886543
Q ss_pred CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC
Q psy15208 105 PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW 147 (1027)
Q Consensus 105 ~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~ 147 (1027)
+..+++|+||||||.+|+.++.++|+ +++++++++|+.+.+
T Consensus 144 ~~~~i~LvGhSlGg~vA~~~a~~~p~--~v~~iv~ldpa~p~f 184 (452)
T 1w52_X 144 NPENVHIIGHSLGAHTAGEAGRRLEG--RVGRVTGLDPAEPCF 184 (452)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHTTT--CSSEEEEESCBCTTT
T ss_pred CcccEEEEEeCHHHHHHHHHHHhccc--ceeeEEecccccccc
Confidence 35689999999999999999999998 799999999876543
|
| >3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.7e-10 Score=132.85 Aligned_cols=100 Identities=20% Similarity=0.298 Sum_probs=81.8
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCc-EEcCHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGF-LVVTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~-~v~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.||+++|+|+|.||+.+|++++++|++|+++|+++... ..+. .+.+++++++++|+|+.+++ +.+++
T Consensus 151 ~~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~----~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li 226 (416)
T 3k5p_A 151 SREVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQ----YGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLI 226 (416)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCC----BTTBEECSSHHHHHHHCSEEEECCCC-----CCB
T ss_pred CccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhc----ccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhc
Confidence 457999999999999999999999999999999999875321 1233 35689999999999998765 46899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.+.|+.||+|++++|++.... +|.+.|.
T Consensus 227 ~~~~l~~mk~gailIN~aRG~v-vd~~aL~ 255 (416)
T 3k5p_A 227 TEAKLRKMKKGAFLINNARGSD-VDLEALA 255 (416)
T ss_dssp CHHHHHHSCTTEEEEECSCTTS-BCHHHHH
T ss_pred CHHHHhhCCCCcEEEECCCChh-hhHHHHH
Confidence 9999999999999999999853 4555454
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.02 E-value=4.1e-10 Score=125.83 Aligned_cols=137 Identities=15% Similarity=0.146 Sum_probs=100.3
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
..|.++++||++ ++. ..|..+++.|. .+|.|+++|+||||.+.....+...++.+ +++.+....+..|++|
T Consensus 100 ~~~~l~~lhg~~---~~~--~~~~~l~~~L~-~~~~v~~~d~~g~~~~~~~~~~~~~~a~~---~~~~i~~~~~~~~~~l 170 (329)
T 3tej_A 100 NGPTLFCFHPAS---GFA--WQFSVLSRYLD-PQWSIIGIQSPRPNGPMQTAANLDEVCEA---HLATLLEQQPHGPYYL 170 (329)
T ss_dssp SSCEEEEECCTT---SCC--GGGGGGGGTSC-TTCEEEEECCCTTTSHHHHCSSHHHHHHH---HHHHHHHHCSSSCEEE
T ss_pred CCCcEEEEeCCc---ccc--hHHHHHHHhcC-CCCeEEEeeCCCCCCCCCCCCCHHHHHHH---HHHHHHHhCCCCCEEE
Confidence 357889999974 332 24778888884 58999999999999875433343334444 3444555555668999
Q ss_pred EEechhHHHHHHHHHh---cCCcCCccEEEEEccCCCc---C--------------------------------------
Q psy15208 112 AGFSFGTFVQAKLQKR---LDKEISIKILILISVAVKK---W-------------------------------------- 147 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~---~p~~~~V~gLVli~p~~~~---~-------------------------------------- 147 (1027)
+||||||.+++.+|.+ +|+ ++.+++++++.++. |
T Consensus 171 ~G~S~Gg~ia~~~a~~L~~~~~--~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (329)
T 3tej_A 171 LGYSLGGTLAQGIAARLRARGE--QVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTELFTT 248 (329)
T ss_dssp EEETHHHHHHHHHHHHHHHTTC--CEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHTTCCCSCCHHHHH
T ss_pred EEEccCHHHHHHHHHHHHhcCC--cccEEEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHhccccccHHHHHH
Confidence 9999999999999999 887 79999999865431 0
Q ss_pred ---------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 148 ---------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 148 ---------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
....+.+|+++++|.+|...+......|.+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~ 295 (329)
T 3tej_A 249 IEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWI 295 (329)
T ss_dssp HHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTE
T ss_pred HHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhc
Confidence 03345689999999999988877666675543
|
| >2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.02 E-value=5.5e-10 Score=127.51 Aligned_cols=100 Identities=15% Similarity=0.199 Sum_probs=83.0
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC--------Cc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG--------NY 876 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG--------~~ 876 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++... ..|....++++++.++|+|+.+++ +.
T Consensus 111 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~ 186 (380)
T 2o4c_A 111 GADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR----EPDGEFVSLERLLAEADVISLHTPLNRDGEHPTR 186 (380)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH----STTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCT
T ss_pred hcccCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh----ccCcccCCHHHHHHhCCEEEEeccCccccccchh
Confidence 567999999999999999999999999999999997644221 345566789999999999998764 67
Q ss_pred ccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++++.+.|+.||+|++++|+|... -+|.+.+.
T Consensus 187 ~li~~~~l~~mk~gailIN~sRG~-vvd~~aL~ 218 (380)
T 2o4c_A 187 HLLDEPRLAALRPGTWLVNASRGA-VVDNQALR 218 (380)
T ss_dssp TSBCHHHHHTSCTTEEEEECSCGG-GBCHHHHH
T ss_pred hhcCHHHHhhCCCCcEEEECCCCc-ccCHHHHH
Confidence 899999999999999999999874 34544444
|
| >1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=3.1e-10 Score=127.82 Aligned_cols=101 Identities=18% Similarity=0.272 Sum_probs=84.3
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++.... . .+++.. ++++++.++|+|+.+++ +.+++
T Consensus 141 ~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~--~-~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li 217 (333)
T 1j4a_A 141 GREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPEL--E-KKGYYVDSLDDLYKQADVISLHVPDVPANVHMI 217 (333)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHH--H-HTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCB
T ss_pred cccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchhH--H-hhCeecCCHHHHHhhCCEEEEcCCCcHHHHHHH
Confidence 4568999999999999999999999999999999999886542 2 235555 78999999999999875 55789
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.+.|+.||+|++++|+|... -+|.+.|.
T Consensus 218 ~~~~l~~mk~ga~lIn~arg~-~vd~~aL~ 246 (333)
T 1j4a_A 218 NDESIAKMKQDVVIVNVSRGP-LVDTDAVI 246 (333)
T ss_dssp SHHHHHHSCTTEEEEECSCGG-GBCHHHHH
T ss_pred hHHHHhhCCCCcEEEECCCCc-ccCHHHHH
Confidence 988899999999999999974 35555554
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=2.8e-10 Score=133.30 Aligned_cols=111 Identities=14% Similarity=0.112 Sum_probs=85.1
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHH-HHHHHHhC-CcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhC--
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQT-LVRVMLSL-GYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKKY-- 104 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~-la~~La~~-Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~~-- 104 (1027)
+.+|+|||+||++.. .. ..|.. +++.|.++ ||+|+++|+||||.|.... .+.....+|+.++++++....
T Consensus 68 ~~~p~vvliHG~~~~---~~-~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~li~~L~~~~g~ 143 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDK---GE-DGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGY 143 (452)
T ss_dssp TTSEEEEEECCSCCT---TC-TTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCeEEEECCCCCC---CC-chHHHHHHHHHHhhCCCEEEEEechhcccCchhHhHhhHHHHHHHHHHHHHHHHHhcCC
Confidence 346889999998542 21 13555 67777764 9999999999999987210 122346788899999986543
Q ss_pred CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC
Q psy15208 105 PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW 147 (1027)
Q Consensus 105 ~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~ 147 (1027)
+..+++|+||||||.+|+.+|.++|+ +++++++++|+.+.+
T Consensus 144 ~~~~i~LvGhSlGg~vA~~~a~~~p~--~v~~iv~ldpa~p~f 184 (452)
T 1bu8_A 144 SPENVHLIGHSLGAHVVGEAGRRLEG--HVGRITGLDPAEPCF 184 (452)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHTTT--CSSEEEEESCBCTTT
T ss_pred CccceEEEEEChhHHHHHHHHHhccc--ccceEEEecCCcccc
Confidence 34689999999999999999999998 799999999876543
|
| >1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=8.9e-10 Score=124.68 Aligned_cols=102 Identities=23% Similarity=0.238 Sum_probs=84.9
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCC----CcccCc
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
..+.|++|+|+|+|.||+.+|++++++|++|+++|+++.+. .+...|++.. ++++++.++|+|+.+++ +.++++
T Consensus 164 ~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 242 (347)
T 1mx3_A 164 ARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG-VERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLIN 242 (347)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBS
T ss_pred cCCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhH
Confidence 46899999999999999999999999999999999876543 3455677654 89999999999998764 467899
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.+.|+.||+|++++|++.... +|.+.+.
T Consensus 243 ~~~l~~mk~gailIN~arg~~-vd~~aL~ 270 (347)
T 1mx3_A 243 DFTVKQMRQGAFLVNTARGGL-VDEKALA 270 (347)
T ss_dssp HHHHTTSCTTEEEEECSCTTS-BCHHHHH
T ss_pred HHHHhcCCCCCEEEECCCChH-HhHHHHH
Confidence 999999999999999999854 3444443
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.01 E-value=3.8e-10 Score=123.98 Aligned_cols=105 Identities=12% Similarity=0.028 Sum_probs=79.2
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
+.+|+|||+||++.+...+....|..+++.|.++||.|+++|+||+|.|.. +...+.+|+..+++.+ +..+++
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~~---~~~~~~~~i~~~~~~~----~~~~v~ 77 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEV---RGEQLLQQVEEIVALS----GQPKVN 77 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHHH---HHHHHHHHHHHHHHHH----CCSCEE
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCchh---hHHHHHHHHHHHHHHh----CCCCEE
Confidence 356789999997432210011246778999999999999999999998752 2334555555555543 445899
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
|+||||||.+++.++.++|+ +++++|+++++.
T Consensus 78 lvGhS~GG~~a~~~a~~~p~--~v~~lv~i~~p~ 109 (285)
T 1ex9_A 78 LIGHSHGGPTIRYVAAVRPD--LIASATSVGAPH 109 (285)
T ss_dssp EEEETTHHHHHHHHHHHCGG--GEEEEEEESCCT
T ss_pred EEEECHhHHHHHHHHHhChh--heeEEEEECCCC
Confidence 99999999999999999988 799999999854
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=98.98 E-value=3.3e-09 Score=110.89 Aligned_cols=124 Identities=19% Similarity=0.254 Sum_probs=89.0
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILA 112 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLV 112 (1027)
.+.|+++||++ ++. ..|..+++.|.+ |+|+++|+||+|. .+.|+.+.++.+ .+..|++|+
T Consensus 17 ~~~l~~~hg~~---~~~--~~~~~~~~~l~~--~~v~~~d~~g~~~----------~~~~~~~~i~~~---~~~~~~~l~ 76 (230)
T 1jmk_C 17 EQIIFAFPPVL---GYG--LMYQNLSSRLPS--YKLCAFDFIEEED----------RLDRYADLIQKL---QPEGPLTLF 76 (230)
T ss_dssp SEEEEEECCTT---CCG--GGGHHHHHHCTT--EEEEEECCCCSTT----------HHHHHHHHHHHH---CCSSCEEEE
T ss_pred CCCEEEECCCC---Cch--HHHHHHHHhcCC--CeEEEecCCCHHH----------HHHHHHHHHHHh---CCCCCeEEE
Confidence 56789999974 332 257888888864 9999999998773 345555555444 334589999
Q ss_pred EechhHHHHHHHHHhcCCc-CCccEEEEEccCCCc---------------------------------------------
Q psy15208 113 GFSFGTFVQAKLQKRLDKE-ISIKILILISVAVKK--------------------------------------------- 146 (1027)
Q Consensus 113 GhSmGG~vAl~~A~~~p~~-~~V~gLVli~p~~~~--------------------------------------------- 146 (1027)
||||||.+++.+|.+++.. .++++++++++..+.
T Consensus 77 G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (230)
T 1jmk_C 77 GYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYS 156 (230)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSGGGSHHHHHHHHHHHHHHHH
T ss_pred EECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccccHHHHHHHHHhcChhhhhhhhHHHHHHHHHHHHHHHH
Confidence 9999999999999887521 258999998854210
Q ss_pred -----CCCCCCCCcEEEEEeCCCCCCChHHHHhhhC
Q psy15208 147 -----WLIPEVPKNTIIIHGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 147 -----~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~ 177 (1027)
.....+.+|+++++|++|..+| .....|.+
T Consensus 157 ~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~w~~ 191 (230)
T 1jmk_C 157 YYVNLISTGQVKADIDLLTSGADFDIP-EWLASWEE 191 (230)
T ss_dssp HHHHCCCCSCBSSEEEEEECSSCCCCC-TTEECSGG
T ss_pred HhhhccccccccccEEEEEeCCCCCCc-cccchHHH
Confidence 0124678999999999999987 33334443
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=6.7e-09 Score=110.75 Aligned_cols=127 Identities=13% Similarity=0.127 Sum_probs=90.4
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
..+.++++||++ ++. ..|..+++.|. .+|.|+++|+||++ .++.++...++.+ .+..+++|
T Consensus 21 ~~~~l~~~hg~~---~~~--~~~~~~~~~l~-~~~~v~~~d~~g~~----------~~~~~~~~~i~~~---~~~~~~~l 81 (244)
T 2cb9_A 21 GGKNLFCFPPIS---GFG--IYFKDLALQLN-HKAAVYGFHFIEED----------SRIEQYVSRITEI---QPEGPYVL 81 (244)
T ss_dssp CSSEEEEECCTT---CCG--GGGHHHHHHTT-TTSEEEEECCCCST----------THHHHHHHHHHHH---CSSSCEEE
T ss_pred CCCCEEEECCCC---CCH--HHHHHHHHHhC-CCceEEEEcCCCHH----------HHHHHHHHHHHHh---CCCCCEEE
Confidence 356789999974 332 25788898886 48999999999874 2455555444433 33458999
Q ss_pred EEechhHHHHHHHHHhcCC-cCCccEEEEEccCCCc--------------------------------------CCCCCC
Q psy15208 112 AGFSFGTFVQAKLQKRLDK-EISIKILILISVAVKK--------------------------------------WLIPEV 152 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~-~~~V~gLVli~p~~~~--------------------------------------~~l~~i 152 (1027)
+||||||.+|+.+|.+.+. ..++.+++++++..+. +....+
T Consensus 82 ~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 161 (244)
T 2cb9_A 82 LGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSITADTENDDSAAYLPEAVRETVMQKKRCYQEYWAQLINEGRI 161 (244)
T ss_dssp EEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCCCCC-------CCSCHHHHHHHTHHHHHHHHHHHHCCCCSCB
T ss_pred EEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcccccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 9999999999999988642 1168999999865431 013467
Q ss_pred CCcEEEEEeC--CCCCCChHHHHhhhCC
Q psy15208 153 PKNTIIIHGE--LDEIIPLKDVFLWANP 178 (1027)
Q Consensus 153 ~~PvLiIhG~--~D~iVP~~~~~~l~~~ 178 (1027)
.+|+++++|+ +|. +++.....|.+.
T Consensus 162 ~~Pvl~i~g~~~~D~-~~~~~~~~w~~~ 188 (244)
T 2cb9_A 162 KSNIHFIEAGIQTET-SGAMVLQKWQDA 188 (244)
T ss_dssp SSEEEEEECSBCSCC-CHHHHTTSSGGG
T ss_pred CCCEEEEEccCcccc-ccccchhHHHHh
Confidence 8999999999 887 455555556543
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=4.3e-10 Score=131.75 Aligned_cols=127 Identities=12% Similarity=0.068 Sum_probs=92.7
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCc---EEEEEcCCCCCCC-----CCCC--------------------
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGY---ISIRMNFRGVGAS-----SGTY-------------------- 83 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy---~Vla~DlrGhG~S-----~g~~-------------------- 83 (1027)
..++|||+||++. +. ..|..+++.|+++|| +|+++|+||||.| +..+
T Consensus 21 ~~ppVVLlHG~g~---s~--~~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l 95 (484)
T 2zyr_A 21 DFRPVVFVHGLAG---SA--GQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETL 95 (484)
T ss_dssp CCCCEEEECCTTC---CG--GGGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHH
T ss_pred CCCEEEEECCCCC---CH--HHHHHHHHHHHHcCCCcceEEEEECCCCCccccccccccccccccccccccccccccccc
Confidence 4677899999843 33 247889999999999 7999999999976 1000
Q ss_pred ---------CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCC-cCCccEEEEEccCCCcCCCCCCC
Q psy15208 84 ---------DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDK-EISIKILILISVAVKKWLIPEVP 153 (1027)
Q Consensus 84 ---------~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~-~~~V~gLVli~p~~~~~~l~~i~ 153 (1027)
........++...++.+...++..+++|+||||||.+++.++.++|+ ..+++++|+++++.... + ...
T Consensus 96 ~~v~~~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~~d-~-p~g 173 (484)
T 2zyr_A 96 DKILSKSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWGVD-A-PEG 173 (484)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCSEE-C-CTT
T ss_pred cccccccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccccc-c-CcC
Confidence 01123455666666666666666789999999999999999999872 11699999999876421 1 235
Q ss_pred CcEEEEEeCCCC
Q psy15208 154 KNTIIIHGELDE 165 (1027)
Q Consensus 154 ~PvLiIhG~~D~ 165 (1027)
.|++.++|..|.
T Consensus 174 ~~~L~ilG~~d~ 185 (484)
T 2zyr_A 174 IPTLAVFGNPKA 185 (484)
T ss_dssp SCEEEEEECGGG
T ss_pred CHHHHHhCCCCc
Confidence 788888887664
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.7e-09 Score=121.96 Aligned_cols=102 Identities=21% Similarity=0.264 Sum_probs=85.5
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++.+ ..+...|+...++++++.++|+|+.+++ ++++++
T Consensus 145 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~ 223 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLIN 223 (334)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTCBC
T ss_pred ccCCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHhhC
Confidence 45789999999999999999999999999999999998866 4455568777789999999999998875 347888
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKL 908 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l 908 (1027)
.+.++.||++++++|++... .++...+
T Consensus 224 ~~~~~~mk~~ailIn~srg~-~v~~~aL 250 (334)
T 2dbq_A 224 EERLKLMKKTAILINIARGK-VVDTNAL 250 (334)
T ss_dssp HHHHHHSCTTCEEEECSCGG-GBCHHHH
T ss_pred HHHHhcCCCCcEEEECCCCc-ccCHHHH
Confidence 88899999999999999763 3443333
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=98.94 E-value=8.2e-10 Score=129.18 Aligned_cols=111 Identities=11% Similarity=0.104 Sum_probs=82.6
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHH-HHHHH-HhCCcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHh--C
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQT-LVRVM-LSLGYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKK--Y 104 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~-la~~L-a~~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~--~ 104 (1027)
..+|+|||+|||+. +... .|.. +++.| ...+|+|+++|+||||.|.... .+......++..+++++.+. .
T Consensus 67 ~~~p~vvliHG~~~---s~~~-~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~v~~~la~ll~~L~~~~g~ 142 (449)
T 1hpl_A 67 TGRKTRFIIHGFID---KGEE-SWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQASQNVRIVGAEVAYLVGVLQSSFDY 142 (449)
T ss_dssp TTSEEEEEECCCCC---TTCT-THHHHHHHHHHHHCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCeEEEEecCCC---CCCc-cHHHHHHHHHHhcCCeEEEEEeCCcccCCccHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34688999999853 2211 2543 66666 4568999999999999885210 11234567788888888643 2
Q ss_pred CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC
Q psy15208 105 PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW 147 (1027)
Q Consensus 105 ~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~ 147 (1027)
+..+++|+||||||.+|..++.++|+ +++++++++|+.+.+
T Consensus 143 ~~~~v~LIGhSlGg~vA~~~a~~~p~--~v~~iv~Ldpa~p~f 183 (449)
T 1hpl_A 143 SPSNVHIIGHSLGSHAAGEAGRRTNG--AVGRITGLDPAEPCF 183 (449)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHTTT--CSSEEEEESCBCTTT
T ss_pred CcccEEEEEECHhHHHHHHHHHhcch--hcceeeccCcccccc
Confidence 45689999999999999999999998 799999999877644
|
| >1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=98.94 E-value=6.8e-10 Score=123.46 Aligned_cols=97 Identities=20% Similarity=0.312 Sum_probs=80.4
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCcHH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVITHD 882 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~~~ 882 (1027)
.+.|++|+|+|+|.||+.+|++++++|++|+++|+++. . . ......+++++++++|+|+.+++ +.++++++
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~-~---~-~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~ 195 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK-E---G-PWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQ 195 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC-C---S-SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc-c---c-CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHH
Confidence 68999999999999999999999999999999998875 1 1 22234578999999999998763 56899988
Q ss_pred HHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 883 HMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.|+.||+|++++|+|... -+|.+.+.
T Consensus 196 ~l~~mk~gailin~srg~-~vd~~aL~ 221 (303)
T 1qp8_A 196 HLALMAEDAVFVNVGRAE-VLDRDGVL 221 (303)
T ss_dssp HHTTSCTTCEEEECSCGG-GBCHHHHH
T ss_pred HHhhCCCCCEEEECCCCc-ccCHHHHH
Confidence 999999999999999963 34544444
|
| >1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=1.5e-09 Score=129.60 Aligned_cols=102 Identities=20% Similarity=0.217 Sum_probs=87.0
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++. ...+...|+...++++++.++|+|+.|++ +.++++
T Consensus 137 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~~~t~~~i~ 215 (529)
T 1ygy_A 137 GTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVS-PARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLID 215 (529)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSC-HHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBC
T ss_pred ccccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCC-hhHHHhcCcEEcCHHHHHhcCCEEEECCCCchHHHHHhC
Confidence 4578999999999999999999999999999999998874 34567778887799999999999999874 468899
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKL 908 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l 908 (1027)
.+.++.||+|++++|+|.... +|...+
T Consensus 216 ~~~~~~~k~g~ilin~arg~i-v~~~aL 242 (529)
T 1ygy_A 216 KEALAKTKPGVIIVNAARGGL-VDEAAL 242 (529)
T ss_dssp HHHHTTSCTTEEEEECSCTTS-BCHHHH
T ss_pred HHHHhCCCCCCEEEECCCCch-hhHHHH
Confidence 888999999999999997743 444443
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=3e-09 Score=122.05 Aligned_cols=92 Identities=17% Similarity=0.218 Sum_probs=80.6
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc---C-------------------------
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV---T------------------------- 858 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~---~------------------------- 858 (1027)
.+.|++|+|+|+|.||+.+++.|+++|++|+++|+++.++.++...|.++. .
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 478999999999999999999999999999999999988888877887654 2
Q ss_pred --HHHHhccCCEEEecC---CC--cccCcHHHHhcCCCCeEEEEecC
Q psy15208 859 --MEYAKKYGDIFVTCT---GN--YHVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 859 --~~e~l~~aDvvi~at---G~--~~vi~~~~~~~mk~gailvNvG~ 898 (1027)
+.+.+..+|+||+|+ |. +.+++.+.++.||+|++++|+|.
T Consensus 249 ~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~ 295 (384)
T 1l7d_A 249 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV 295 (384)
T ss_dssp HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred HHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence 556677899999998 63 45788999999999999999995
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=3e-09 Score=122.77 Aligned_cols=92 Identities=22% Similarity=0.255 Sum_probs=80.1
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcC----------------------------
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT---------------------------- 858 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~---------------------------- 858 (1027)
.+.|++|+|+|+|.||+.+++.|+++|++|+++|+++.++.++...|.+...
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 169 KVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 3689999999999999999999999999999999999888887777877542
Q ss_pred HHHHhccCCEEEecCC-----CcccCcHHHHhcCCCCeEEEEecC
Q psy15208 859 MEYAKKYGDIFVTCTG-----NYHVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 859 ~~e~l~~aDvvi~atG-----~~~vi~~~~~~~mk~gailvNvG~ 898 (1027)
+.+.+..+|+||++++ ++.+++++.++.||+|++++|+|.
T Consensus 249 l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~ 293 (401)
T 1x13_A 249 FAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAA 293 (401)
T ss_dssp HHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred HHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcC
Confidence 5566778999999853 336788899999999999999995
|
| >3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=1.1e-09 Score=123.33 Aligned_cols=99 Identities=18% Similarity=0.272 Sum_probs=82.6
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++... .|+. ..+++++++++|+|+.++. +++++
T Consensus 159 ~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~-----~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li 233 (333)
T 3ba1_A 159 TTKFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPN-----TNYTYYGSVVELASNSDILVVACPLTPETTHII 233 (333)
T ss_dssp CCCCTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTT-----CCSEEESCHHHHHHTCSEEEECSCCCGGGTTCB
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhc-----cCceecCCHHHHHhcCCEEEEecCCChHHHHHh
Confidence 457899999999999999999999999999999999887542 2555 5578999999999998875 45789
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+++.++.||++++++|++... .+|.+.+.
T Consensus 234 ~~~~l~~mk~gailIn~srG~-~vd~~aL~ 262 (333)
T 3ba1_A 234 NREVIDALGPKGVLINIGRGP-HVDEPELV 262 (333)
T ss_dssp CHHHHHHHCTTCEEEECSCGG-GBCHHHHH
T ss_pred hHHHHhcCCCCCEEEECCCCc-hhCHHHHH
Confidence 888899999999999999874 34444444
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=98.92 E-value=3.5e-09 Score=120.50 Aligned_cols=92 Identities=21% Similarity=0.239 Sum_probs=80.3
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcC--------------------------HHH
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT--------------------------MEY 861 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~--------------------------~~e 861 (1027)
+.+++|+|+|+|.||+.+|+.|+++|++|+++|+++.++.++...|.++.. +++
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 588999999999999999999999999999999999998888888876543 457
Q ss_pred HhccCCEEEecC---C--CcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 862 AKKYGDIFVTCT---G--NYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 862 ~l~~aDvvi~at---G--~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.++++|+||++. | .+.+++++.++.||+|++++|++.-
T Consensus 262 ~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d 304 (381)
T 3p2y_A 262 AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGE 304 (381)
T ss_dssp HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCC
Confidence 788999999875 2 3468999999999999999999763
|
| >2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.92 E-value=7.9e-10 Score=123.36 Aligned_cols=98 Identities=19% Similarity=0.243 Sum_probs=81.5
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.|++|+|+|+|.||+.+|++++++|++|+++|+++.+.. +...++++++.++|+|+.++. +.++++
T Consensus 139 ~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------~~~~~l~ell~~aDvV~l~~p~~~~t~~li~ 212 (311)
T 2cuk_A 139 GLDLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------YPFLSLEELLKEADVVSLHTPLTPETHRLLN 212 (311)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------SCBCCHHHHHHHCSEEEECCCCCTTTTTCBC
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------cccCCHHHHHhhCCEEEEeCCCChHHHhhcC
Confidence 3468999999999999999999999999999999998875432 345678999999999998753 468899
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++.++.||+|++++|+|... -+|.+.+.
T Consensus 213 ~~~l~~mk~ga~lin~srg~-~vd~~aL~ 240 (311)
T 2cuk_A 213 RERLFAMKRGAILLNTARGA-LVDTEALV 240 (311)
T ss_dssp HHHHTTSCTTCEEEECSCGG-GBCHHHHH
T ss_pred HHHHhhCCCCcEEEECCCCC-ccCHHHHH
Confidence 88899999999999999963 34544443
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=98.91 E-value=6.9e-10 Score=121.74 Aligned_cols=107 Identities=12% Similarity=0.018 Sum_probs=77.1
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhC--CcEEEEEcCCCCCCCCCCCCC-ccchHHHHHHHHHHHHHhCC-CCcE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL--GYISIRMNFRGVGASSGTYDS-GNGETDDMEILLRYIQKKYP-YLPI 109 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~--Gy~Vla~DlrGhG~S~g~~~~-~~~~~~Dv~avl~~L~~~~~-~~pv 109 (1027)
++|||+||++.+.++.. .|..+++.|++. |+.|+++|+ |||.|...... ......++..+++++..... ..++
T Consensus 6 ~pvVllHG~~~~~~~~~--~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~ 82 (279)
T 1ei9_A 6 LPLVIWHGMGDSCCNPL--SMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQGY 82 (279)
T ss_dssp CCEEEECCTTCCSCCTT--TTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGTTCE
T ss_pred CcEEEECCCCCCCCCcc--cHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccccccCHHHHHHHHHHHHHhhhhccCCE
Confidence 44799999864332212 377888988875 889999998 99987521101 12456666777777764211 1589
Q ss_pred EEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 110 ILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 110 iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
.|+||||||.++..++.++|+ .+++++|+++++.
T Consensus 83 ~lvGhSmGG~ia~~~a~~~~~-~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 83 NAMGFSQGGQFLRAVAQRCPS-PPMVNLISVGGQH 116 (279)
T ss_dssp EEEEETTHHHHHHHHHHHCCS-SCEEEEEEESCCT
T ss_pred EEEEECHHHHHHHHHHHHcCC-cccceEEEecCcc
Confidence 999999999999999999997 2499999998654
|
| >2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.90 E-value=1.7e-09 Score=121.76 Aligned_cols=100 Identities=16% Similarity=0.263 Sum_probs=84.1
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCC----cccCcH
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGN----YHVITH 881 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~----~~vi~~ 881 (1027)
..+.|++|+|+|+|.||+.+|+.++++|++|+++|+++.. ..+...|+...++++++.++|+|+.|++. .+++++
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~ 220 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINE 220 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEEECCHHHHHHHCSEEEECCCCCTTTTTSBCH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCceecCHHHHHhhCCEEEEcCCCChHHHHHhCH
Confidence 4689999999999999999999999999999999998865 44556687777899999999999988753 578888
Q ss_pred HHHhcCCCCeEEEEecCCCcccchhhh
Q psy15208 882 DHMRDMKDQAIVCNIGHFDNEIEVEKL 908 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d~eid~~~l 908 (1027)
+.++.||+| +++|++... .+|...+
T Consensus 221 ~~~~~mk~g-ilin~srg~-~vd~~aL 245 (333)
T 2d0i_A 221 ERVKKLEGK-YLVNIGRGA-LVDEKAV 245 (333)
T ss_dssp HHHHHTBTC-EEEECSCGG-GBCHHHH
T ss_pred HHHhhCCCC-EEEECCCCc-ccCHHHH
Confidence 889999999 999999763 3444333
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=98.89 E-value=3.5e-09 Score=119.09 Aligned_cols=104 Identities=19% Similarity=0.221 Sum_probs=86.5
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.|++|+|+|+|.||+.+|+.++++|++|+++|+++.+...+...|+...++++++.++|+|+.+++ +.++++
T Consensus 150 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~ 229 (330)
T 2gcg_A 150 GYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCN 229 (330)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBS
T ss_pred CcCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCCEEEEeCCCChHHHHhhC
Confidence 3468999999999999999999999999999999998876555555667776689999999999998875 357888
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.+.++.||+|++++|++.... +|.+.+.
T Consensus 230 ~~~~~~mk~gailIn~srg~~-v~~~aL~ 257 (330)
T 2gcg_A 230 KDFFQKMKETAVFINISRGDV-VNQDDLY 257 (330)
T ss_dssp HHHHHHSCTTCEEEECSCGGG-BCHHHHH
T ss_pred HHHHhcCCCCcEEEECCCCcc-cCHHHHH
Confidence 888999999999999998732 3434343
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.89 E-value=5.1e-09 Score=122.32 Aligned_cols=104 Identities=14% Similarity=0.161 Sum_probs=77.6
Q ss_pred cEEEEECCCCCCCCCCCh-----HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC------------CCccchHHHHHHH
Q psy15208 34 GVVLIAHPHPLFGGTMDN-----KVVQTLVRVMLSLGYISIRMNFRGVGASSGTY------------DSGNGETDDMEIL 96 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~-----~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~------------~~~~~~~~Dv~av 96 (1027)
.+|||+||+. |+... ..+..+++.+ |+.|+++|+||||+|.... -+.+..++|+..+
T Consensus 39 ~Pi~l~~Gge---g~~~~~~~~~g~~~~lA~~~---~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~ 112 (446)
T 3n2z_B 39 GSILFYTGNE---GDIIWFCNNTGFMWDVAEEL---KAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAEL 112 (446)
T ss_dssp CEEEEEECCS---SCHHHHHHHCHHHHHHHHHH---TEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHH
T ss_pred CCEEEEeCCC---CcchhhhhcccHHHHHHHHh---CCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHH
Confidence 3467778853 22111 1223344443 7899999999999996321 1235679999999
Q ss_pred HHHHHHhC---CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 97 LRYIQKKY---PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 97 l~~L~~~~---~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
++.++..+ +..|++++||||||.+|+.++.++|+ .+.++|+.+++..
T Consensus 113 ~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~--~v~g~i~ssapv~ 162 (446)
T 3n2z_B 113 IKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPH--MVVGALAASAPIW 162 (446)
T ss_dssp HHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTT--TCSEEEEETCCTT
T ss_pred HHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhc--cccEEEEeccchh
Confidence 99998875 45689999999999999999999999 7999999887653
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.88 E-value=4.8e-09 Score=120.27 Aligned_cols=91 Identities=21% Similarity=0.298 Sum_probs=79.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc------------------------------
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV------------------------------ 857 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~------------------------------ 857 (1027)
+.+.+|+|+|+|.||+.+|+.|+++||+|+++|+++.++.++...|.++.
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 57899999999999999999999999999999999998888877777632
Q ss_pred CHHHHhccCCEEEecC---C--CcccCcHHHHhcCCCCeEEEEecC
Q psy15208 858 TMEYAKKYGDIFVTCT---G--NYHVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 858 ~~~e~l~~aDvvi~at---G--~~~vi~~~~~~~mk~gailvNvG~ 898 (1027)
+++++++++||||++. | .+.+++++.++.||+|++++|++.
T Consensus 268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence 3566778999999884 2 456899999999999999999975
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=98.87 E-value=1.9e-09 Score=126.13 Aligned_cols=110 Identities=14% Similarity=0.114 Sum_probs=81.2
Q ss_pred CCccEEEEECCCCCCCCCCChHHHH-HHHHHHHh-CCcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHh--C
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQ-TLVRVMLS-LGYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKK--Y 104 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~-~la~~La~-~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~--~ 104 (1027)
..+|+|||+|||.. +... .|. .+++.|.+ .+|+|+++|+||+|.|.... .+.....+|+.++++++.+. .
T Consensus 68 ~~~p~vvliHG~~~---s~~~-~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~~a~~l~~ll~~L~~~~g~ 143 (450)
T 1rp1_A 68 TDKKTRFIIHGFID---KGEE-NWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSY 143 (450)
T ss_dssp TTSEEEEEECCCCC---TTCT-THHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCeEEEEccCCC---CCCc-chHHHHHHHHHhcCCeEEEEEeCccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34688999999853 2221 243 36666655 48999999999999875110 12234577888888888643 2
Q ss_pred CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC
Q psy15208 105 PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW 147 (1027)
Q Consensus 105 ~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~ 147 (1027)
+..+++|+||||||.+|..++.++|+ +.++++++|+.+.+
T Consensus 144 ~~~~v~LVGhSlGg~vA~~~a~~~p~---v~~iv~Ldpa~p~f 183 (450)
T 1rp1_A 144 SPSQVQLIGHSLGAHVAGEAGSRTPG---LGRITGLDPVEASF 183 (450)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHTSTT---CCEEEEESCCCTTT
T ss_pred ChhhEEEEEECHhHHHHHHHHHhcCC---cccccccCcccccc
Confidence 45689999999999999999999886 89999999877644
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=98.86 E-value=8.3e-09 Score=112.03 Aligned_cols=170 Identities=13% Similarity=0.086 Sum_probs=110.2
Q ss_pred ceEEEEEecC-Cc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCCh-HHHHHHHHHH-HhCC---cEEEEEcCCCC
Q psy15208 4 NTKFFNINGS-VG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDN-KVVQTLVRVM-LSLG---YISIRMNFRGV 76 (1027)
Q Consensus 4 ~~~~i~I~t~-dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~-~~~~~la~~L-a~~G---y~Vla~DlrGh 76 (1027)
..+.+.+.++ .| .+.+.+|.|++....++.|+|+++||.+. +.+ ..+..+...+ ++.| +.|+.+|+|+.
T Consensus 17 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~----~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~ 92 (275)
T 2qm0_A 17 NTEQWKMYSKLEGKEYQIHISKPKQPAPDSGYPVIYVLDGNAF----FQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIE 92 (275)
T ss_dssp TEEEEEEECTTTCCEEEEEEECCSSCCCTTCEEEEEEESHHHH----HHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCS
T ss_pred CceEEEEEecCCCCEEEEEEECCCCCCCCCCccEEEEecChHH----HHHHHHHHHHHhhcchhcCCCCeEEEEECCCCC
Confidence 4556777775 34 78889999986433356899999999532 111 1122222222 3347 99999999873
Q ss_pred CC----------CCCC----C---------CCcc---chHHHH-HHHHHHHHHhCCC--CcEEEEEechhHHHHHHHHHh
Q psy15208 77 GA----------SSGT----Y---------DSGN---GETDDM-EILLRYIQKKYPY--LPIILAGFSFGTFVQAKLQKR 127 (1027)
Q Consensus 77 G~----------S~g~----~---------~~~~---~~~~Dv-~avl~~L~~~~~~--~pviLVGhSmGG~vAl~~A~~ 127 (1027)
+. +... + .... ...+.+ ..++.++...++. .+++++||||||.+++.++.+
T Consensus 93 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~ 172 (275)
T 2qm0_A 93 GAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFT 172 (275)
T ss_dssp SSCCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred CcCcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHh
Confidence 21 1110 0 0000 112222 3455666666653 469999999999999999999
Q ss_pred cCCcCCccEEEEEccCCCc---CC------------CCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 128 LDKEISIKILILISVAVKK---WL------------IPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 128 ~p~~~~V~gLVli~p~~~~---~~------------l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
+|+ .++++++++|.... .. ......|+++.||+.|..++......+.+.+
T Consensus 173 ~p~--~f~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~D~~~~~~~~~~~~~~L 237 (275)
T 2qm0_A 173 NLN--AFQNYFISSPSIWWNNKSVLEKEENLIIELNNAKFETGVFLTVGSLEREHMVVGANELSERL 237 (275)
T ss_dssp CGG--GCSEEEEESCCTTHHHHGGGGGTTHHHHHHHTCSSCEEEEEEEETTSCHHHHHHHHHHHHHH
T ss_pred Cch--hhceeEEeCceeeeChHHHHHHHHHHHhhhcccCCCceEEEEeCCcccchhhHHHHHHHHHH
Confidence 998 78999999987521 00 2345679999999999988888777665543
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=3.7e-09 Score=121.97 Aligned_cols=165 Identities=9% Similarity=0.018 Sum_probs=105.3
Q ss_pred eEEEEEecC--CceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcE----EEEEcCCCCC-
Q psy15208 5 TKFFNINGS--VGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYI----SIRMNFRGVG- 77 (1027)
Q Consensus 5 ~~~i~I~t~--dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~----Vla~DlrGhG- 77 (1027)
.+.+.+.+. +....+.+|.|++.. .++.|+|+++||.++..+. .+..+++.|+++|+. |+.+|++|++
T Consensus 168 v~~~~~~S~~~g~~~~~~vy~P~~~~-~~~~PvlvllHG~~~~~~~----~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~ 242 (403)
T 3c8d_A 168 AKEIIWKSERLKNSRRVWIFTTGDVT-AEERPLAVLLDGEFWAQSM----PVWPVLTSLTHRQQLPPAVYVLIDAIDTTH 242 (403)
T ss_dssp CEEEEEEETTTTEEEEEEEEEC------CCCCEEEESSHHHHHHTS----CCHHHHHHHHHTTSSCSCEEEEECCCSHHH
T ss_pred eEEEEEEccccCCcEEEEEEeCCCCC-CCCCCEEEEeCCHHHhhcC----cHHHHHHHHHHcCCCCCeEEEEECCCCCcc
Confidence 344555543 336788888887532 2568999999995432111 123567788888875 9999998742
Q ss_pred CCCCCCCCccchHHHH-HHHHHHHHHhCCC----CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCC--c----
Q psy15208 78 ASSGTYDSGNGETDDM-EILLRYIQKKYPY----LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVK--K---- 146 (1027)
Q Consensus 78 ~S~g~~~~~~~~~~Dv-~avl~~L~~~~~~----~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~--~---- 146 (1027)
++... .......+.+ ..++.++...++. .+++|+||||||.+++.++.++|+ .+++++++++... .
T Consensus 243 r~~~~-~~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~--~f~~~~~~sg~~~~~~~~~~ 319 (403)
T 3c8d_A 243 RAHEL-PCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPE--RFGCVLSQSGSYWWPHRGGQ 319 (403)
T ss_dssp HHHHS-SSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTT--TCCEEEEESCCTTTTCTTSS
T ss_pred ccccC-CChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCch--hhcEEEEeccccccCCCCCC
Confidence 22211 1111222222 4567777776642 369999999999999999999998 7899999998652 1
Q ss_pred ---CC--------CCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 147 ---WL--------IPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 147 ---~~--------l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
+. ......|+++.||+.|..+ ......+.+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~i~l~~G~~D~~~-~~~~~~l~~~ 361 (403)
T 3c8d_A 320 QEGVLLEKLKAGEVSAEGLRIVLEAGIREPMI-MRANQALYAQ 361 (403)
T ss_dssp SCCHHHHHHHTTSSCCCSCEEEEEEESSCHHH-HHHHHHHHHH
T ss_pred cHHHHHHHHHhccccCCCceEEEEeeCCCchh-HHHHHHHHHH
Confidence 10 1345678999999988643 4455544443
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=9.8e-09 Score=117.53 Aligned_cols=92 Identities=20% Similarity=0.193 Sum_probs=77.4
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-cCcEE-------cCHHHHhccCCEEEecCCCc--
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-EGFLV-------VTMEYAKKYGDIFVTCTGNY-- 876 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-~G~~v-------~~~~e~l~~aDvvi~atG~~-- 876 (1027)
.+.|++|+|+|+|.||+.+|+.++++|++|+++|+++.++..+.. .|..+ .++++.+..+|+||+|++.+
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~ 244 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA 244 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 478999999999999999999999999999999999987766554 45431 24567778899999988543
Q ss_pred ---ccCcHHHHhcCCCCeEEEEecC
Q psy15208 877 ---HVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 877 ---~vi~~~~~~~mk~gailvNvG~ 898 (1027)
++++++.++.||+|++++|+|.
T Consensus 245 ~t~~li~~~~l~~mk~g~~iV~va~ 269 (377)
T 2vhw_A 245 KAPKLVSNSLVAHMKPGAVLVDIAI 269 (377)
T ss_dssp CCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred CCcceecHHHHhcCCCCcEEEEEec
Confidence 5678889999999999999995
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=4.2e-08 Score=110.89 Aligned_cols=95 Identities=22% Similarity=0.292 Sum_probs=81.2
Q ss_pred cCc-cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhc-cCCEEEecCCCcccCcH
Q psy15208 804 TDV-MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKK-YGDIFVTCTGNYHVITH 881 (1027)
Q Consensus 804 t~~-~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~-~aDvvi~atG~~~vi~~ 881 (1027)
.+. .+.||+|+|+|+|+||+.+|++|+.+||+|+++|+++.+...+...|.+.++.++++. .+||++.| ...++|+.
T Consensus 168 ~G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~-A~~~~I~~ 246 (355)
T 1c1d_A 168 RGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPC-AMGGVITT 246 (355)
T ss_dssp TTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEEC-SCSCCBCH
T ss_pred cCCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHh-HHHhhcCH
Confidence 365 6999999999999999999999999999999999998764456667888888888887 89999876 47778999
Q ss_pred HHHhcCCCCeEEEEecCCC
Q psy15208 882 DHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d 900 (1027)
+.++.|| ..+++|.+-.+
T Consensus 247 ~~~~~lk-~~iVie~AN~p 264 (355)
T 1c1d_A 247 EVARTLD-CSVVAGAANNV 264 (355)
T ss_dssp HHHHHCC-CSEECCSCTTC
T ss_pred HHHhhCC-CCEEEECCCCC
Confidence 9999998 67888887543
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=98.70 E-value=1e-07 Score=103.71 Aligned_cols=95 Identities=19% Similarity=0.290 Sum_probs=66.9
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
..+.||++||++ ++. ..|..+++.|. +.|+++|+++.. ...+...++.|+ ++.+....+..|++|
T Consensus 23 ~~~~l~~~hg~~---~~~--~~~~~~~~~L~---~~v~~~d~~~~~----~~~~~~~~a~~~---~~~i~~~~~~~~~~l 87 (283)
T 3tjm_A 23 SERPLFLVHPIE---GST--TVFHSLASRLS---IPTYGLQCTRAA----PLDSIHSLAAYY---IDCIRQVQPEGPYRV 87 (283)
T ss_dssp SSCCEEEECCTT---CCS--GGGHHHHHHCS---SCEEEECCCTTS----CCSCHHHHHHHH---HHHHTTTCCSSCCEE
T ss_pred CCCeEEEECCCC---CCH--HHHHHHHHhcC---ceEEEEecCCCC----CCCCHHHHHHHH---HHHHHHhCCCCCEEE
Confidence 456789999974 333 25788999885 999999997421 112333444444 344433334468999
Q ss_pred EEechhHHHHHHHHHhc---CCcCCcc---EEEEEccC
Q psy15208 112 AGFSFGTFVQAKLQKRL---DKEISIK---ILILISVA 143 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~---p~~~~V~---gLVli~p~ 143 (1027)
+||||||.+|+.+|.+. |+ ++. +++++++.
T Consensus 88 ~GhS~Gg~va~~~a~~~~~~~~--~v~~~~~lvlid~~ 123 (283)
T 3tjm_A 88 AGYSYGACVAFEMCSQLQAQQS--PAPTHNSLFLFDGS 123 (283)
T ss_dssp EEETHHHHHHHHHHHHHHHHHT--TSCCCCEEEEESCC
T ss_pred EEECHhHHHHHHHHHHHHHcCC--CCCccceEEEEcCC
Confidence 99999999999999876 65 577 99999864
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=98.69 E-value=6.9e-08 Score=92.57 Aligned_cols=82 Identities=11% Similarity=0.029 Sum_probs=57.9
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILA 112 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLV 112 (1027)
.|+|||+|+ .... |..+ |++ +|+|+++|+||||.|..........++|+.++++.+ +..+++++
T Consensus 22 ~~~vv~~H~---~~~~-----~~~~---l~~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~----~~~~~~lv 85 (131)
T 2dst_A 22 GPPVLLVAE---EASR-----WPEA---LPE-GYAFYLLDLPGYGRTEGPRMAPEELAHFVAGFAVMM----NLGAPWVL 85 (131)
T ss_dssp SSEEEEESS---SGGG-----CCSC---CCT-TSEEEEECCTTSTTCCCCCCCHHHHHHHHHHHHHHT----TCCSCEEE
T ss_pred CCeEEEEcC---CHHH-----HHHH---HhC-CcEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHc----CCCccEEE
Confidence 467899992 1222 2222 554 699999999999999865433344455555555443 44589999
Q ss_pred EechhHHHHHHHHHhcCC
Q psy15208 113 GFSFGTFVQAKLQKRLDK 130 (1027)
Q Consensus 113 GhSmGG~vAl~~A~~~p~ 130 (1027)
||||||.+++.+|.++|.
T Consensus 86 G~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 86 LRGLGLALGPHLEALGLR 103 (131)
T ss_dssp ECGGGGGGHHHHHHTTCC
T ss_pred EEChHHHHHHHHHhcCCc
Confidence 999999999999998874
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.65 E-value=5.6e-08 Score=110.88 Aligned_cols=93 Identities=22% Similarity=0.248 Sum_probs=75.5
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-cCcEE-------cCHHHHhccCCEEEecCCCc--
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-EGFLV-------VTMEYAKKYGDIFVTCTGNY-- 876 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-~G~~v-------~~~~e~l~~aDvvi~atG~~-- 876 (1027)
.+.+++|+|+|+|.||+.+|+.++++|++|+++|+++.+..++.. .|..+ .++++.+..+|+||+|+|..
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~ 242 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGA 242 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcc
Confidence 378999999999999999999999999999999999987766543 45432 23556778899999998754
Q ss_pred ---ccCcHHHHhcCCCCeEEEEecCC
Q psy15208 877 ---HVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 877 ---~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.++.++.++.||+|++++|+|..
T Consensus 243 ~~~~li~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 243 KAPKLVTRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp ---CCSCHHHHTTSCTTCEEEECC--
T ss_pred ccchhHHHHHHHhhcCCCEEEEEecC
Confidence 45788889999999999999975
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=2e-08 Score=114.49 Aligned_cols=150 Identities=19% Similarity=0.176 Sum_probs=107.3
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc--------cCCEEEec
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK--------YGDIFVTC 872 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~--------~aDvvi~a 872 (1027)
..|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...+...|++ +.+ ..+.+. .+|+|+++
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~ 260 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIEC 260 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEEC
Confidence 579999999999999999999999999 899999999998889999986 332 223332 37999999
Q ss_pred CCCcccCcHHHHhcCCCCeEEEEecCCCc----ccchhhhhccceeccccceeeeecCCCcEEEEecCCccccccCCCCC
Q psy15208 873 TGNYHVITHDHMRDMKDQAIVCNIGHFDN----EIEVEKLKKYKWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGH 948 (1027)
Q Consensus 873 tG~~~vi~~~~~~~mk~gailvNvG~~d~----eid~~~l~~~~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~ 948 (1027)
+|....+. ..++.|+++|.++.+|.... +++...+................+ .+.+.++++|++ .
T Consensus 261 ~G~~~~~~-~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~--~~~~~l~~~g~i--------~ 329 (370)
T 4ej6_A 261 AGVAETVK-QSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVH--RRAADLVATGAI--------E 329 (370)
T ss_dssp SCCHHHHH-HHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCTTCH--HHHHHHHHTTCS--------C
T ss_pred CCCHHHHH-HHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccChHHH--HHHHHHHHcCCC--------C
Confidence 99776444 55899999999999997632 444433332222222222111112 356677888887 5
Q ss_pred CcceEehhhHhHHHHHHHHh
Q psy15208 949 PSYVMSSSFANQTLAQIELF 968 (1027)
Q Consensus 949 P~~vmd~sf~~q~la~~~l~ 968 (1027)
+..+++..|.+..+...+-.
T Consensus 330 ~~~~i~~~~~l~~~~~A~~~ 349 (370)
T 4ej6_A 330 IDRMISRRISLDEAPDVISN 349 (370)
T ss_dssp CGGGEEEEECGGGHHHHHHS
T ss_pred hhHcEEEEEEHHHHHHHHHH
Confidence 66677888888777766654
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=98.62 E-value=2.1e-08 Score=116.57 Aligned_cols=109 Identities=17% Similarity=0.156 Sum_probs=70.3
Q ss_pred CCccEEEEECCCCCCCC---CCChHHHH----HHHHHHHhCCcEEEEEcCCCCCCCCCCCC-------------------
Q psy15208 31 KLKGVVLIAHPHPLFGG---TMDNKVVQ----TLVRVMLSLGYISIRMNFRGVGASSGTYD------------------- 84 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gG---s~~~~~~~----~la~~La~~Gy~Vla~DlrGhG~S~g~~~------------------- 84 (1027)
+.+++|||+||++.+.. +.....|. .+++.|.++||+|+++|+||||.|.....
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~ 129 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSE 129 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhccccccccccc
Confidence 35677899999853211 11112353 48899999999999999999998752100
Q ss_pred --CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHh--------------------------cCCcCCccE
Q psy15208 85 --SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKR--------------------------LDKEISIKI 136 (1027)
Q Consensus 85 --~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~--------------------------~p~~~~V~g 136 (1027)
+...++.|+.++++. ..+..+++|+||||||.+++.++.. +|+ +|++
T Consensus 130 ~~~~~~~a~dl~~ll~~---l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~--~V~s 204 (431)
T 2hih_A 130 KYGHERYGKTYEGVLKD---WKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDN--MVTS 204 (431)
T ss_dssp HHTCCSEEEEECCSCTT---CBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCS--CEEE
T ss_pred cCCHHHHHHHHHHHHHH---hCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCccc--ceeE
Confidence 000001111111111 1123589999999999999998876 466 7999
Q ss_pred EEEEccCC
Q psy15208 137 LILISVAV 144 (1027)
Q Consensus 137 LVli~p~~ 144 (1027)
+|+++++.
T Consensus 205 lv~i~tP~ 212 (431)
T 2hih_A 205 ITTIATPH 212 (431)
T ss_dssp EEEESCCT
T ss_pred EEEECCCC
Confidence 99999864
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=98.60 E-value=3.5e-08 Score=113.21 Aligned_cols=107 Identities=10% Similarity=-0.024 Sum_probs=69.6
Q ss_pred CccEEEEECCCCCCCCCC--ChHHHH----HHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHH------
Q psy15208 32 LKGVVLIAHPHPLFGGTM--DNKVVQ----TLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRY------ 99 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~--~~~~~~----~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~------ 99 (1027)
.+++|||+||+..+.... ....|. .+++.|+++||+|+++|+||||.|.. ...++...++.
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~-------~a~~l~~~i~~~~vDy~ 77 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWD-------RACEAYAQLVGGTVDYG 77 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHH-------HHHHHHHHHHCEEEECC
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCccc-------cHHHHHHHHHhhhhhhh
Confidence 456689999985432110 001243 45689999999999999999997642 12222222221
Q ss_pred --HH-----------------HhCCCCcEEEEEechhHHHHHHHHHh-------------------cCC----cCCccEE
Q psy15208 100 --IQ-----------------KKYPYLPIILAGFSFGTFVQAKLQKR-------------------LDK----EISIKIL 137 (1027)
Q Consensus 100 --L~-----------------~~~~~~pviLVGhSmGG~vAl~~A~~-------------------~p~----~~~V~gL 137 (1027)
+. ...+..+++|+||||||.++..++.. +|. ..+|+++
T Consensus 78 ~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sL 157 (387)
T 2dsn_A 78 AAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSV 157 (387)
T ss_dssp HHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEE
T ss_pred hhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEE
Confidence 10 11345689999999999999999973 240 0279999
Q ss_pred EEEccCCC
Q psy15208 138 ILISVAVK 145 (1027)
Q Consensus 138 Vli~p~~~ 145 (1027)
|+++++..
T Consensus 158 V~i~tP~~ 165 (387)
T 2dsn_A 158 TTIATPHD 165 (387)
T ss_dssp EEESCCTT
T ss_pred EEECCCCC
Confidence 99998653
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=8.8e-07 Score=103.70 Aligned_cols=122 Identities=13% Similarity=0.080 Sum_probs=75.4
Q ss_pred EEEEEEecCCccccCCccEEEEECCCCCCCCCCChH---------------HH-HHHHHHH-HhCCcEEEEEcCCCCCCC
Q psy15208 17 LHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNK---------------VV-QTLVRVM-LSLGYISIRMNFRGVGAS 79 (1027)
Q Consensus 17 I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~---------------~~-~~la~~L-a~~Gy~Vla~DlrGhG~S 79 (1027)
..+.++.|.+. .++.|+|.+-||....+....-. .+ ..+...+ .++||.|+++|++|.|.+
T Consensus 92 ~~gtv~~P~~~--~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~Vv~~Dy~G~G~~ 169 (462)
T 3guu_A 92 DVATVWIPAKP--ASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHEGFKAA 169 (462)
T ss_dssp EEEEEEECSSC--CSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCEEEEECTTTTTTC
T ss_pred EEEEEEecCCC--CCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCEEEEecCCCCCCc
Confidence 56678888763 13489999999963221100000 01 1345566 788999999999999964
Q ss_pred CCCCCCccchHHHHHHHHHHHHHh--C-CCCcEEEEEechhHHHHHHHHHhcC---CcCCccEEEEEccC
Q psy15208 80 SGTYDSGNGETDDMEILLRYIQKK--Y-PYLPIILAGFSFGTFVQAKLQKRLD---KEISIKILILISVA 143 (1027)
Q Consensus 80 ~g~~~~~~~~~~Dv~avl~~L~~~--~-~~~pviLVGhSmGG~vAl~~A~~~p---~~~~V~gLVli~p~ 143 (1027)
+........++...++..... . ...++.++|||+||..++.++...| .+..+.+.+..+++
T Consensus 170 ---y~~~~~~~~~vlD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~g~~~~~~p 236 (462)
T 3guu_A 170 ---FIAGYEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIVGASHGGTP 236 (462)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEEEEEEESCC
T ss_pred ---ccCCcchhHHHHHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceEEEEEecCC
Confidence 222221222222233322222 1 2358999999999999988877644 23358899988864
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.7e-07 Score=102.40 Aligned_cols=93 Identities=22% Similarity=0.304 Sum_probs=78.5
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.+++..+. ..+..+.||+|+|+|+|. +|+.+|+.|...||+|++++... .++++.+++||+|
T Consensus 143 cTp~gv~~lL~-~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------~~L~~~~~~ADIV 208 (285)
T 3l07_A 143 CTPKGIMTMLR-EYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT-------------TDLKSHTTKADIL 208 (285)
T ss_dssp HHHHHHHHHHH-HTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SSHHHHHTTCSEE
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-------------hhHHHhcccCCEE
Confidence 35567666544 457789999999999998 79999999999999999996532 3678889999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
|.++|.+++++.+ ++|+|++++++|...
T Consensus 209 I~Avg~p~~I~~~---~vk~GavVIDvgi~~ 236 (285)
T 3l07_A 209 IVAVGKPNFITAD---MVKEGAVVIDVGINH 236 (285)
T ss_dssp EECCCCTTCBCGG---GSCTTCEEEECCCEE
T ss_pred EECCCCCCCCCHH---HcCCCcEEEEecccC
Confidence 9999999999876 469999999999864
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=1.6e-07 Score=106.83 Aligned_cols=93 Identities=15% Similarity=0.166 Sum_probs=77.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH-------HHhc-----cCCEEEec
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME-------YAKK-----YGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~-------e~l~-----~aDvvi~a 872 (1027)
...|++|+|+|.|.||+.+++.++.+|+ +|++++.++.+...+...|++ +.+.. +.+. ..|+|+++
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~ 268 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVEC 268 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEEC
Confidence 3589999999999999999999999999 899999999999889999985 43322 2222 47999999
Q ss_pred CCCcccCcHHHHhcCCCC-eEEEEecCCC
Q psy15208 873 TGNYHVITHDHMRDMKDQ-AIVCNIGHFD 900 (1027)
Q Consensus 873 tG~~~vi~~~~~~~mk~g-ailvNvG~~d 900 (1027)
+|....+. ..++.|+++ |.++.+|...
T Consensus 269 ~g~~~~~~-~~~~~l~~~~G~iv~~G~~~ 296 (373)
T 1p0f_A 269 AGRIETMM-NALQSTYCGSGVTVVLGLAS 296 (373)
T ss_dssp SCCHHHHH-HHHHTBCTTTCEEEECCCCC
T ss_pred CCCHHHHH-HHHHHHhcCCCEEEEEccCC
Confidence 99865444 558999999 9999999764
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=98.53 E-value=2.6e-07 Score=100.96 Aligned_cols=92 Identities=24% Similarity=0.359 Sum_probs=77.9
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.+++.-+. ..+..+.||+|+|+|+|. +|+.+|+.|...||+|++++... .++++.+++||||
T Consensus 142 cTp~gv~~lL~-~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t-------------~~L~~~~~~ADIV 207 (285)
T 3p2o_A 142 CTPLGVMKLLK-AYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT-------------KDLSLYTRQADLI 207 (285)
T ss_dssp HHHHHHHHHHH-HTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SCHHHHHTTCSEE
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc-------------hhHHHHhhcCCEE
Confidence 35566665544 457789999999999988 79999999999999999997542 3578889999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.++|.+++++.+ ++|+|++++++|..
T Consensus 208 I~Avg~p~~I~~~---~vk~GavVIDVgi~ 234 (285)
T 3p2o_A 208 IVAAGCVNLLRSD---MVKEGVIVVDVGIN 234 (285)
T ss_dssp EECSSCTTCBCGG---GSCTTEEEEECCCE
T ss_pred EECCCCCCcCCHH---HcCCCeEEEEeccC
Confidence 9999999999876 46999999999986
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.52 E-value=2.6e-07 Score=100.92 Aligned_cols=93 Identities=18% Similarity=0.227 Sum_probs=78.5
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.+++..+. ..+..+.||+|+|+|+|. +|+.+|+.|...||+|++++... .++++.+++||+|
T Consensus 143 cTp~gv~~lL~-~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T-------------~~L~~~~~~ADIV 208 (286)
T 4a5o_A 143 CTPKGIMTLLA-STGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT-------------RDLADHVSRADLV 208 (286)
T ss_dssp HHHHHHHHHHH-HTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC-------------SCHHHHHHTCSEE
T ss_pred CCHHHHHHHHH-HhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC-------------cCHHHHhccCCEE
Confidence 35566666544 457789999999999987 89999999999999999996532 3577889999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
|.++|.+++++.++ +|+|++++++|...
T Consensus 209 I~Avg~p~~I~~~~---vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 209 VVAAGKPGLVKGEW---IKEGAIVIDVGINR 236 (286)
T ss_dssp EECCCCTTCBCGGG---SCTTCEEEECCSCS
T ss_pred EECCCCCCCCCHHH---cCCCeEEEEecccc
Confidence 99999999998764 69999999999864
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=98.52 E-value=3.9e-08 Score=110.82 Aligned_cols=101 Identities=14% Similarity=0.112 Sum_probs=82.2
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHh-ccCCEEEecCC
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAK-KYGDIFVTCTG 874 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l-~~aDvvi~atG 874 (1027)
+.++.+. + ...|++|+|+|.|.||+.+++.++.+|++|++++.++.+...+...|++ +..-.+.+ ...|++++++|
T Consensus 166 ~~~l~~~-~-~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g 243 (348)
T 3two_A 166 YSPLKFS-K-VTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIP 243 (348)
T ss_dssp HHHHHHT-T-CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCC
T ss_pred HHHHHhc-C-CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCC
Confidence 4555544 3 3589999999999999999999999999999999999999999999986 32222222 26899999999
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
....+. ..++.|+++|.++.+|...
T Consensus 244 ~~~~~~-~~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 244 THYDLK-DYLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp SCCCHH-HHHTTEEEEEEEEECCCCC
T ss_pred cHHHHH-HHHHHHhcCCEEEEECCCC
Confidence 886444 5689999999999999876
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=98.52 E-value=2.2e-07 Score=101.02 Aligned_cols=90 Identities=12% Similarity=0.163 Sum_probs=77.1
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.+++..+.+. + +.||+|+|+|+|. +|+.+|+.|...||+|++++.. ..++++.+++||+|
T Consensus 134 cTp~gv~~lL~~~-~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~-------------t~~L~~~~~~ADIV 197 (276)
T 3ngx_A 134 ATPRAVIDIMDYY-G--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK-------------TKDIGSMTRSSKIV 197 (276)
T ss_dssp HHHHHHHHHHHHH-T--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT-------------CSCHHHHHHHSSEE
T ss_pred CcHHHHHHHHHHh-C--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC-------------cccHHHhhccCCEE
Confidence 4566777666654 4 8999999999986 8999999999999999999753 24678889999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|+++|.+++++.++ +|+|++++++|..
T Consensus 198 I~Avg~p~~I~~~~---vk~GavVIDvgi~ 224 (276)
T 3ngx_A 198 VVAVGRPGFLNREM---VTPGSVVIDVGIN 224 (276)
T ss_dssp EECSSCTTCBCGGG---CCTTCEEEECCCE
T ss_pred EECCCCCccccHhh---ccCCcEEEEeccC
Confidence 99999999998764 6999999999985
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=98.49 E-value=2.1e-07 Score=105.91 Aligned_cols=92 Identities=18% Similarity=0.163 Sum_probs=75.8
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE---E-----cCHHHHhccCCEEEecCCCcc--
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL---V-----VTMEYAKKYGDIFVTCTGNYH-- 877 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~---v-----~~~~e~l~~aDvvi~atG~~~-- 877 (1027)
+.+++|+|+|+|.+|+.+++.|+.+|++|+++|+++.++.++...|.. + .++.+.+..+|+||+|+|...
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~ 244 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRR 244 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCC
Confidence 678999999999999999999999999999999999887776554421 1 124456678999999997543
Q ss_pred ---cCcHHHHhcCCCCeEEEEecCC
Q psy15208 878 ---VITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 878 ---vi~~~~~~~mk~gailvNvG~~ 899 (1027)
++..+.++.||++++++++|..
T Consensus 245 ~~~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 245 APILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp CCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred CCeecCHHHHhhCCCCCEEEEEecC
Confidence 3577889999999999999975
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=98.47 E-value=1.8e-07 Score=105.90 Aligned_cols=92 Identities=17% Similarity=0.231 Sum_probs=75.8
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-----HH---Hh-----ccCCEEEec
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-----EY---AK-----KYGDIFVTC 872 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-----~e---~l-----~~aDvvi~a 872 (1027)
..|++|+|+|.|.||+.+++.++.+|+ +|++++.++.+...+...|++ +.+. ++ .+ ...|+|+++
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~ 249 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIEC 249 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEEC
Confidence 579999999999999999999999999 999999999888888888975 3321 11 11 248999999
Q ss_pred CCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 873 TGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 873 tG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
+|....+. ..++.|+++|.++.+|...
T Consensus 250 ~g~~~~~~-~~~~~l~~~G~iv~~G~~~ 276 (356)
T 1pl8_A 250 TGAEASIQ-AGIYATRSGGTLVLVGLGS 276 (356)
T ss_dssp SCCHHHHH-HHHHHSCTTCEEEECSCCC
T ss_pred CCChHHHH-HHHHHhcCCCEEEEEecCC
Confidence 99875444 5589999999999999764
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.46 E-value=3.5e-07 Score=100.57 Aligned_cols=92 Identities=24% Similarity=0.308 Sum_probs=76.7
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHH--HHhccCC
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTME--YAKKYGD 867 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~--e~l~~aD 867 (1027)
.|-.+++.-+. ..+..+.||+|+|+|.|. +|+.+|+.|...||+|++++.... +++ +.+++||
T Consensus 147 cTp~gv~~lL~-~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~-------------~l~l~~~~~~AD 212 (300)
T 4a26_A 147 CTAKGVIVLLK-RCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS-------------TEDMIDYLRTAD 212 (300)
T ss_dssp HHHHHHHHHHH-HHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC-------------HHHHHHHHHTCS
T ss_pred CCHHHHHHHHH-HcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC-------------CchhhhhhccCC
Confidence 35566665544 457789999999999988 799999999999999999976432 334 7889999
Q ss_pred EEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 868 IFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 868 vvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|||+++|.+++++.++ +|+|++++++|.-
T Consensus 213 IVI~Avg~p~~I~~~~---vk~GavVIDvgi~ 241 (300)
T 4a26_A 213 IVIAAMGQPGYVKGEW---IKEGAAVVDVGTT 241 (300)
T ss_dssp EEEECSCCTTCBCGGG---SCTTCEEEECCCE
T ss_pred EEEECCCCCCCCcHHh---cCCCcEEEEEecc
Confidence 9999999999998764 7999999999985
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=5.7e-07 Score=98.84 Aligned_cols=92 Identities=27% Similarity=0.323 Sum_probs=78.4
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.+++..+.+ .+..+.|++|+|+|.|. +|+.+|+.|...||+|++++... .++.+.+++||+|
T Consensus 147 cTp~gi~~ll~~-~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------~~L~~~~~~ADIV 212 (301)
T 1a4i_A 147 CTPKGCLELIKE-TGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT-------------AHLDEEVNKGDIL 212 (301)
T ss_dssp HHHHHHHHHHHT-TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SSHHHHHTTCSEE
T ss_pred chHHHHHHHHHH-cCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc-------------ccHHHHhccCCEE
Confidence 356666655544 47789999999999997 79999999999999999997542 3678889999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|+|.+++++.++ +|+|++++++|..
T Consensus 213 I~Avg~p~~I~~~~---vk~GavVIDVgi~ 239 (301)
T 1a4i_A 213 VVATGQPEMVKGEW---IKPGAIVIDCGIN 239 (301)
T ss_dssp EECCCCTTCBCGGG---SCTTCEEEECCCB
T ss_pred EECCCCcccCCHHH---cCCCcEEEEccCC
Confidence 99999999999775 6899999999985
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.5e-07 Score=107.31 Aligned_cols=162 Identities=14% Similarity=0.094 Sum_probs=106.7
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH-------HHhc---
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME-------YAKK--- 864 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~-------e~l~--- 864 (1027)
|.++.+..+ .-.|++|+|+|.|.||..+++.++.+|+ +|++++.++.+...+...|++ +++.. +.+.
T Consensus 182 ~~al~~~~~-~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~ 260 (378)
T 3uko_A 182 LGAVWNTAK-VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLT 260 (378)
T ss_dssp HHHHHTTTC-CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHT
T ss_pred HHHHHhhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhc
Confidence 344434334 3589999999999999999999999999 899999999999999999986 34332 2222
Q ss_pred --cCCEEEecCCCcccCcHHHHhcCCCC-eEEEEecCCC--cccchhhhhcc-ceeccccceeeee-cCC-CcEEEEecC
Q psy15208 865 --YGDIFVTCTGNYHVITHDHMRDMKDQ-AIVCNIGHFD--NEIEVEKLKKY-KWENIKPQVDHII-FPD-GKKIILLAE 936 (1027)
Q Consensus 865 --~aDvvi~atG~~~vi~~~~~~~mk~g-ailvNvG~~d--~eid~~~l~~~-~~~~~~~~v~~y~-~~d-g~~i~LLa~ 936 (1027)
..|++++++|....+. ..++.++++ ++++.+|... .+++++....+ ...........+. ..+ .+.+.++++
T Consensus 261 ~gg~D~vid~~g~~~~~~-~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~ 339 (378)
T 3uko_A 261 DGGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMN 339 (378)
T ss_dssp TSCBSEEEECSCCHHHHH-HHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCCCHHHHH-HHHHHhhccCCEEEEEcccCCCCccccCHHHHhcCcEEEEEEecCCCchHHHHHHHHHHHc
Confidence 3899999999876544 558999996 9999999763 33333322111 1111111111000 001 245567777
Q ss_pred CccccccCCCCCCcceEehhhHhHHHHHHHHh
Q psy15208 937 GRLVNLGCGTGHPSYVMSSSFANQTLAQIELF 968 (1027)
Q Consensus 937 GrlvNl~~~~G~P~~vmd~sf~~q~la~~~l~ 968 (1027)
|++ .|..+++..|.+..+...+-.
T Consensus 340 g~l--------~~~~~i~~~~~l~~~~~A~~~ 363 (378)
T 3uko_A 340 KEI--------KVDEYITHNLTLGEINKAFDL 363 (378)
T ss_dssp TSS--------CCGGGEEEEEEGGGHHHHHHH
T ss_pred CCC--------ChhHheeeEeeHHHHHHHHHH
Confidence 777 455567777777666665544
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.44 E-value=3.6e-07 Score=89.74 Aligned_cols=88 Identities=14% Similarity=0.175 Sum_probs=73.1
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH-HhhcCcEE---cCHHHHhccCCEEEecCCCcc-cCcHHH
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ-AAMEGFLV---VTMEYAKKYGDIFVTCTGNYH-VITHDH 883 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-A~~~G~~v---~~~~e~l~~aDvvi~atG~~~-vi~~~~ 883 (1027)
.|++|+|+|+|.+|+.+++.++..|++|+++++++.++.. +...|..+ .++.+++.++|+||+||+..+ ++..
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~~~~~~-- 97 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKTPIVEE-- 97 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSSCSBCG--
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCCcEeeH--
Confidence 3999999999999999999999999999999999987654 55566553 357788899999999998764 3332
Q ss_pred HhcCCCCeEEEEecCC
Q psy15208 884 MRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~ 899 (1027)
+.+++|+.++++|..
T Consensus 98 -~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 98 -RSLMPGKLFIDLGNP 112 (144)
T ss_dssp -GGCCTTCEEEECCSS
T ss_pred -HHcCCCCEEEEccCC
Confidence 568999999999875
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=98.44 E-value=3.2e-07 Score=104.35 Aligned_cols=93 Identities=15% Similarity=0.170 Sum_probs=76.7
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH-------HHhc-----cCCEEEec
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME-------YAKK-----YGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~-------e~l~-----~aDvvi~a 872 (1027)
...|++|+|+|.|.||+.+++.++.+|+ +|++++.++.+...+...|++ +.+.. +.+. ..|+++++
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~ 268 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV 268 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEEC
Confidence 3589999999999999999999999999 899999999998888888975 43322 2222 47999999
Q ss_pred CCCcccCcHHHHhcCCCC-eEEEEecCCC
Q psy15208 873 TGNYHVITHDHMRDMKDQ-AIVCNIGHFD 900 (1027)
Q Consensus 873 tG~~~vi~~~~~~~mk~g-ailvNvG~~d 900 (1027)
+|....+. ..++.|+++ |.++.+|...
T Consensus 269 ~g~~~~~~-~~~~~l~~~~G~iv~~G~~~ 296 (374)
T 2jhf_A 269 IGRLDTMV-TALSCCQEAYGVSVIVGVPP 296 (374)
T ss_dssp SCCHHHHH-HHHHHBCTTTCEEEECSCCC
T ss_pred CCCHHHHH-HHHHHhhcCCcEEEEeccCC
Confidence 99865444 558999999 9999999764
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=98.43 E-value=4.6e-07 Score=98.98 Aligned_cols=92 Identities=18% Similarity=0.260 Sum_probs=78.3
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEE
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIF 869 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvv 869 (1027)
.|-.++...+.+ .+..+.|++|+|+|.|. +|+.+|+.|...||+|++++... .++.+.+++||+|
T Consensus 141 cTp~gi~~ll~~-~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------~~L~~~~~~ADIV 206 (288)
T 1b0a_A 141 CTPRGIVTLLER-YNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT-------------KNLRHHVENADLL 206 (288)
T ss_dssp HHHHHHHHHHHH-TTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC-------------SCHHHHHHHCSEE
T ss_pred CcHHHHHHHHHH-cCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc-------------hhHHHHhccCCEE
Confidence 355666655544 57789999999999997 79999999999999999997544 3578888999999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|.++|.+++++.++ +|+|++++++|..
T Consensus 207 I~Avg~p~lI~~~~---vk~GavVIDVgi~ 233 (288)
T 1b0a_A 207 IVAVGKPGFIPGDW---IKEGAIVIDVGIN 233 (288)
T ss_dssp EECSCCTTCBCTTT---SCTTCEEEECCCE
T ss_pred EECCCCcCcCCHHH---cCCCcEEEEccCC
Confidence 99999999999775 6999999999985
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=2.9e-07 Score=104.76 Aligned_cols=96 Identities=16% Similarity=0.166 Sum_probs=78.2
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH-------HHhc-----cCCEEEec
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME-------YAKK-----YGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~-------e~l~-----~aDvvi~a 872 (1027)
...|++|+|+|.|.||..+++.++.+|+ +|++++.++.+...+...|++ +++.. +.+. ..|+|+++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~ 272 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDC 272 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEEC
Confidence 3589999999999999999999999999 899999999998889889985 43322 2222 47999999
Q ss_pred CCCcccCcHHHHhcCCCC-eEEEEecCCCccc
Q psy15208 873 TGNYHVITHDHMRDMKDQ-AIVCNIGHFDNEI 903 (1027)
Q Consensus 873 tG~~~vi~~~~~~~mk~g-ailvNvG~~d~ei 903 (1027)
+|....+. ..++.++++ +.++.+|.....+
T Consensus 273 ~G~~~~~~-~~~~~l~~~~G~iv~~G~~~~~~ 303 (376)
T 1e3i_A 273 AGTAQTLK-AAVDCTVLGWGSCTVVGAKVDEM 303 (376)
T ss_dssp SCCHHHHH-HHHHTBCTTTCEEEECCCSSSEE
T ss_pred CCCHHHHH-HHHHHhhcCCCEEEEECCCCCcc
Confidence 99865444 568999999 9999999854333
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=1.2e-07 Score=107.92 Aligned_cols=105 Identities=18% Similarity=0.179 Sum_probs=81.2
Q ss_pred HHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh-hcCcE-EcC------HHHHhccCC
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA-MEGFL-VVT------MEYAKKYGD 867 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-~~G~~-v~~------~~e~l~~aD 867 (1027)
.|.++.+. ++...|++|+|+|+|.||+.+++.++.+|++|++++.++.+...+. ..|++ +.+ +.+....+|
T Consensus 175 a~~al~~~-~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D 253 (366)
T 1yqd_A 175 VYSPLKYF-GLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLD 253 (366)
T ss_dssp HHHHHHHT-TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEE
T ss_pred HHHHHHhc-CcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCC
Confidence 34555443 4333899999999999999999999999999999999988877766 77875 322 222233579
Q ss_pred EEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcc
Q psy15208 868 IFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNE 902 (1027)
Q Consensus 868 vvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~e 902 (1027)
+|++++|....+ ...++.|++++.++++|.....
T Consensus 254 ~vid~~g~~~~~-~~~~~~l~~~G~iv~~g~~~~~ 287 (366)
T 1yqd_A 254 GIIDTVSAVHPL-LPLFGLLKSHGKLILVGAPEKP 287 (366)
T ss_dssp EEEECCSSCCCS-HHHHHHEEEEEEEEECCCCSSC
T ss_pred EEEECCCcHHHH-HHHHHHHhcCCEEEEEccCCCC
Confidence 999999987544 4568999999999999987543
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.41 E-value=4.5e-07 Score=103.17 Aligned_cols=93 Identities=18% Similarity=0.293 Sum_probs=76.9
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH-------HHhc-----cCCEEEec
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME-------YAKK-----YGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~-------e~l~-----~aDvvi~a 872 (1027)
...|++|+|+|.|.||..+++.++.+|+ +|++++.++.+...+...|++ +.+.. +.+. ..|++|++
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~ 269 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLEC 269 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEEC
Confidence 3589999999999999999999999999 899999999998888888985 43322 2222 47999999
Q ss_pred CCCcccCcHHHHhcCCCC-eEEEEecCCC
Q psy15208 873 TGNYHVITHDHMRDMKDQ-AIVCNIGHFD 900 (1027)
Q Consensus 873 tG~~~vi~~~~~~~mk~g-ailvNvG~~d 900 (1027)
+|....+. ..++.++++ |.++.+|...
T Consensus 270 ~g~~~~~~-~~~~~l~~~~G~iv~~G~~~ 297 (374)
T 1cdo_A 270 VGNVGVMR-NALESCLKGWGVSVLVGWTD 297 (374)
T ss_dssp SCCHHHHH-HHHHTBCTTTCEEEECSCCS
T ss_pred CCCHHHHH-HHHHHhhcCCcEEEEEcCCC
Confidence 99865444 558999999 9999999864
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.41 E-value=1.5e-07 Score=107.09 Aligned_cols=159 Identities=14% Similarity=0.067 Sum_probs=102.4
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc-----
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK----- 864 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~----- 864 (1027)
+.++.+..+ .-.|++|+|+|.|.||..+++.++.+|+ +|++++.++.+...+...|++ +.+ ..+.+.
T Consensus 179 ~~al~~~~~-~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~g 257 (371)
T 1f8f_A 179 AGACINALK-VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDG 257 (371)
T ss_dssp HHHHHTTTC-CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTS
T ss_pred HHHHHhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCC
Confidence 344433333 3589999999999999999999999999 799999999998888888875 332 222222
Q ss_pred cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC----cccchhhhhccceeccccceeeeec-CC-CcEEEEecCCc
Q psy15208 865 YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD----NEIEVEKLKKYKWENIKPQVDHIIF-PD-GKKIILLAEGR 938 (1027)
Q Consensus 865 ~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d----~eid~~~l~~~~~~~~~~~v~~y~~-~d-g~~i~LLa~Gr 938 (1027)
..|+|++++|....+. ..++.|+++|.++.+|... .+++...+...+..........+.. .+ .+.+.++++|+
T Consensus 258 g~D~vid~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~ 336 (371)
T 1f8f_A 258 GVNFALESTGSPEILK-QGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 336 (371)
T ss_dssp CEEEEEECSCCHHHHH-HHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSCHHHHHHHHHHHHHTTS
T ss_pred CCcEEEECCCCHHHHH-HHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCCCCchHHHHHHHHHHHHcCC
Confidence 3799999999865444 5589999999999999763 2344333322111111111100000 01 24566777777
Q ss_pred cccccCCCCCCcceEehhhHhHHHHHHH
Q psy15208 939 LVNLGCGTGHPSYVMSSSFANQTLAQIE 966 (1027)
Q Consensus 939 lvNl~~~~G~P~~vmd~sf~~q~la~~~ 966 (1027)
+ .|..+++. |.+..+...+
T Consensus 337 l--------~~~~~i~~-~~l~~~~~A~ 355 (371)
T 1f8f_A 337 F--------PFDQLVKF-YAFDEINQAA 355 (371)
T ss_dssp C--------CGGGGEEE-EEGGGHHHHH
T ss_pred C--------CcccceeE-ecHHHHHHHH
Confidence 6 45445555 6655554443
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.40 E-value=3.1e-07 Score=103.60 Aligned_cols=92 Identities=21% Similarity=0.198 Sum_probs=75.3
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCH-------HHH---h-----ccCCEEEe
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTM-------EYA---K-----KYGDIFVT 871 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~-------~e~---l-----~~aDvvi~ 871 (1027)
..|++|+|+|.|.||+.+++.++.+|++|++++.++.+...+...|++ +.+. ++. . ...|++++
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid 246 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTID 246 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEE
Confidence 579999999999999999999999999999999999888888888875 2221 111 1 24899999
Q ss_pred cCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 872 CTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 872 atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
++|....+. ..++.|+++|.++.+|...
T Consensus 247 ~~g~~~~~~-~~~~~l~~~G~iv~~G~~~ 274 (352)
T 1e3j_A 247 CSGNEKCIT-IGINITRTGGTLMLVGMGS 274 (352)
T ss_dssp CSCCHHHHH-HHHHHSCTTCEEEECSCCS
T ss_pred CCCCHHHHH-HHHHHHhcCCEEEEEecCC
Confidence 999875444 5589999999999999764
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=3.7e-07 Score=101.63 Aligned_cols=106 Identities=14% Similarity=0.187 Sum_probs=80.7
Q ss_pred hhhhHHHHHhhh--------cCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH-HhhcC---cEE--
Q psy15208 792 CRESLIDGIKRA--------TDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ-AAMEG---FLV-- 856 (1027)
Q Consensus 792 ~~~s~~~~i~r~--------t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-A~~~G---~~v-- 856 (1027)
|..+.+.-+.+. .+..+.|++|+|+|.|. +|+.+|+.|.+.||+|++++++..+... +...+ ...
T Consensus 151 Tp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~ 230 (320)
T 1edz_A 151 TPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVED 230 (320)
T ss_dssp HHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEE
T ss_pred cHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccc
Confidence 445566555553 56679999999999997 6999999999999999999887433211 11111 111
Q ss_pred ------cCHHHHhccCCEEEecCCCccc-CcHHHHhcCCCCeEEEEecCCC
Q psy15208 857 ------VTMEYAKKYGDIFVTCTGNYHV-ITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 857 ------~~~~e~l~~aDvvi~atG~~~v-i~~~~~~~mk~gailvNvG~~d 900 (1027)
.++.+.+.++|+||+|||.++. ++.++ +|+|++++++|...
T Consensus 231 ~~~t~~~~L~e~l~~ADIVIsAtg~p~~vI~~e~---vk~GavVIDVgi~r 278 (320)
T 1edz_A 231 LGEYSEDLLKKCSLDSDVVITGVPSENYKFPTEY---IKEGAVCINFACTK 278 (320)
T ss_dssp EEECCHHHHHHHHHHCSEEEECCCCTTCCBCTTT---SCTTEEEEECSSSC
T ss_pred cccccHhHHHHHhccCCEEEECCCCCcceeCHHH---cCCCeEEEEcCCCc
Confidence 3578889999999999999886 88764 69999999999863
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=98.37 E-value=9e-07 Score=96.40 Aligned_cols=93 Identities=25% Similarity=0.352 Sum_probs=78.4
Q ss_pred hhhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhC--CCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCC
Q psy15208 791 GCRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRAL--SAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGD 867 (1027)
Q Consensus 791 g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~--Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aD 867 (1027)
.|-.+.+..+.+ .+..+.||+|+|+|.|. +|+.+|+.|... ||+|++++... .++.+.+++||
T Consensus 140 cTp~gi~~ll~~-~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t-------------~~L~~~~~~AD 205 (281)
T 2c2x_A 140 CTPRGIVHLLRR-YDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT-------------RDLPALTRQAD 205 (281)
T ss_dssp HHHHHHHHHHHH-TTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC-------------SCHHHHHTTCS
T ss_pred ChHHHHHHHHHH-cCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch-------------hHHHHHHhhCC
Confidence 355666655554 47789999999999997 599999999999 89999996543 36788899999
Q ss_pred EEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 868 IFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 868 vvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
+||.++|.+++++.++ +|+|++++++|...
T Consensus 206 IVI~Avg~p~~I~~~~---vk~GavVIDVgi~r 235 (281)
T 2c2x_A 206 IVVAAVGVAHLLTADM---VRPGAAVIDVGVSR 235 (281)
T ss_dssp EEEECSCCTTCBCGGG---SCTTCEEEECCEEE
T ss_pred EEEECCCCCcccCHHH---cCCCcEEEEccCCC
Confidence 9999999999999775 69999999999863
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=4.6e-07 Score=102.98 Aligned_cols=93 Identities=16% Similarity=0.220 Sum_probs=76.6
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH-------HHhc-----cCCEEEec
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME-------YAKK-----YGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~-------e~l~-----~aDvvi~a 872 (1027)
...|++|+|+|.|.||+.+++.++.+|+ +|++++.++.+...+...|++ +.+.. +.+. ..|+++++
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~ 267 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFEC 267 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEEC
Confidence 3589999999999999999999999999 899999999998888888875 43322 2222 47999999
Q ss_pred CCCcccCcHHHHhcCCCC-eEEEEecCCC
Q psy15208 873 TGNYHVITHDHMRDMKDQ-AIVCNIGHFD 900 (1027)
Q Consensus 873 tG~~~vi~~~~~~~mk~g-ailvNvG~~d 900 (1027)
+|....+. ..++.|+++ +.++.+|...
T Consensus 268 ~g~~~~~~-~~~~~l~~~~G~iv~~G~~~ 295 (373)
T 2fzw_A 268 IGNVKVMR-AALEACHKGWGVSVVVGVAA 295 (373)
T ss_dssp SCCHHHHH-HHHHTBCTTTCEEEECSCCC
T ss_pred CCcHHHHH-HHHHhhccCCcEEEEEecCC
Confidence 99865444 558999999 9999999764
|
| >1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=2.5e-06 Score=96.81 Aligned_cols=130 Identities=16% Similarity=0.225 Sum_probs=100.3
Q ss_pred CccceEeecccccccccccchhhhhhHHHHH---hhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCC---
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDGI---KRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEID--- 842 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i---~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~d--- 842 (1027)
+.+|+++ |...||.--...++ .+.++..+...+|+|+|+|..|.++|+.+.++|+ +|+++|++
T Consensus 159 ~~Ipvf~----------DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli 228 (388)
T 1vl6_A 159 MNIPVFH----------DDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGIL 228 (388)
T ss_dssp CSSCEEE----------HHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEEC
T ss_pred cCcceec----------cccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcc
Confidence 6788886 45567766554444 3345667899999999999999999999999999 89999988
Q ss_pred -chh---------HHHHhhcCc--EEcCHHHHhccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhhc
Q psy15208 843 -PIC---------ALQAAMEGF--LVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKK 910 (1027)
Q Consensus 843 -p~r---------~~~A~~~G~--~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~ 910 (1027)
..| ...|..... ...++.+++..+|++|.+++ +++++++.++.|+++.+++-.+....|+..+...+
T Consensus 229 ~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlIG~Sa-p~l~t~emVk~Ma~~pIIfalSNPt~E~~p~~a~~ 307 (388)
T 1vl6_A 229 NENDPETCLNEYHLEIARITNPERLSGDLETALEGADFFIGVSR-GNILKPEWIKKMSRKPVIFALANPVPEIDPELARE 307 (388)
T ss_dssp CTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEEECSC-SSCSCHHHHTTSCSSCEEEECCSSSCSSCHHHHHH
T ss_pred cCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCEEEEeCC-CCccCHHHHHhcCCCCEEEEcCCCCCCCCHHHHHH
Confidence 433 223433221 13469999999999999998 79999999999999999988887766777664443
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=98.35 E-value=3e-07 Score=104.19 Aligned_cols=102 Identities=18% Similarity=0.171 Sum_probs=80.7
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCH------HHHh-ccCCE
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTM------EYAK-KYGDI 868 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~------~e~l-~~aDv 868 (1027)
|.++.+ .+ .-.|++|+|+|.|.||+.+++.++.+|++|++++.++.+...+...|++ +.+. .+.+ ...|+
T Consensus 169 ~~~l~~-~~-~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~ 246 (360)
T 1piw_A 169 YSPLVR-NG-CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDL 246 (360)
T ss_dssp HHHHHH-TT-CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEE
T ss_pred HHHHHH-cC-CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCE
Confidence 445544 23 3579999999999999999999999999999999999888888888875 3332 2222 25799
Q ss_pred EEecCCC--cccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 869 FVTCTGN--YHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 869 vi~atG~--~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
||+++|. ...+. ..++.|+++|.++++|....
T Consensus 247 vid~~g~~~~~~~~-~~~~~l~~~G~iv~~g~~~~ 280 (360)
T 1piw_A 247 IVVCASSLTDIDFN-IMPKAMKVGGRIVSISIPEQ 280 (360)
T ss_dssp EEECCSCSTTCCTT-TGGGGEEEEEEEEECCCCCS
T ss_pred EEECCCCCcHHHHH-HHHHHhcCCCEEEEecCCCC
Confidence 9999998 55555 45899999999999998653
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=98.32 E-value=1.4e-06 Score=98.93 Aligned_cols=93 Identities=17% Similarity=0.250 Sum_probs=75.3
Q ss_pred Cc-cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH-HhhcCcEEcCHHHHhc-cCCEEEecCCCcccCcH
Q psy15208 805 DV-MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ-AAMEGFLVVTMEYAKK-YGDIFVTCTGNYHVITH 881 (1027)
Q Consensus 805 ~~-~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-A~~~G~~v~~~~e~l~-~aDvvi~atG~~~vi~~ 881 (1027)
+. .+.||+|+|+|+|.+|+.+|+.|..+|++|+++|+++.+..+ +...|.+.++.++.+. ++||++.|. ..++++.
T Consensus 167 G~~~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~ll~~~~DIvip~a-~~~~I~~ 245 (364)
T 1leh_A 167 GSDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCA-LGAVLND 245 (364)
T ss_dssp SSCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECS-CSCCBST
T ss_pred cccCCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHHhccCCcEeeccc-hHHHhCH
Confidence 44 689999999999999999999999999999999999876653 4445778777777766 899999875 5668888
Q ss_pred HHHhcCCCCeEEEEecCC
Q psy15208 882 DHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~ 899 (1027)
+.++.|+ ..++++..-.
T Consensus 246 ~~~~~lg-~~iV~e~An~ 262 (364)
T 1leh_A 246 FTIPQLK-AKVIAGSADN 262 (364)
T ss_dssp THHHHCC-CSEECCSCSC
T ss_pred HHHHhCC-CcEEEeCCCC
Confidence 8888884 4566666544
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.31 E-value=8.4e-07 Score=99.51 Aligned_cols=167 Identities=17% Similarity=0.163 Sum_probs=109.2
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcE-EcC-----HHHH---h---ccCCEEEecC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFL-VVT-----MEYA---K---KYGDIFVTCT 873 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~---l---~~aDvvi~at 873 (1027)
...|++|+|.|+|.+|...++.++.+|++ |++++.++.|...+..+|++ +.+ ..+. + ...|++++++
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~ 237 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETA 237 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEECS
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcccccccc
Confidence 36899999999999999999999999995 57889999999999999985 322 2222 1 2479999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCCCcccch-----hhhhccceecccccee---eeecCC-CcEEEEecCCccccccC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHFDNEIEV-----EKLKKYKWENIKPQVD---HIIFPD-GKKIILLAEGRLVNLGC 944 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~d~eid~-----~~l~~~~~~~~~~~v~---~y~~~d-g~~i~LLa~GrlvNl~~ 944 (1027)
|....+. ..++.+++++.++.+|....+..+ ..+...+......... .+...+ .+.+.|+++|++
T Consensus 238 G~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g~l----- 311 (346)
T 4a2c_A 238 GVPQTVE-LAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKL----- 311 (346)
T ss_dssp CSHHHHH-HHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTTCS-----
T ss_pred cccchhh-hhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcCCC-----
Confidence 9887555 458999999999999987543222 1121111111111110 010001 245667788877
Q ss_pred CCCCCcceEehhhHhHHHHHHHHhhcCCCCCCcEEeCC
Q psy15208 945 GTGHPSYVMSSSFANQTLAQIELFNNTSNYPIGIYTLP 982 (1027)
Q Consensus 945 ~~G~P~~vmd~sf~~q~la~~~l~~~~~~~~~gv~~lp 982 (1027)
++..+++..|.+..+...+-.-..++...+|+..|
T Consensus 312 ---~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P 346 (346)
T 4a2c_A 312 ---SLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP 346 (346)
T ss_dssp ---CCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred ---CCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence 56667888888887776664422223333454444
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=98.31 E-value=2.9e-07 Score=103.44 Aligned_cols=105 Identities=16% Similarity=0.105 Sum_probs=82.0
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCH-----HHHh----ccC
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTM-----EYAK----KYG 866 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~-----~e~l----~~a 866 (1027)
+.++.+. + ...|++|+|+|.|.||+.+++.++.+|++|++++.++.+...+...|++ +.+. .+.+ ...
T Consensus 154 ~~~l~~~-~-~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~ 231 (339)
T 1rjw_A 154 YKALKVT-G-AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGV 231 (339)
T ss_dssp HHHHHHH-T-CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSE
T ss_pred HHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCC
Confidence 4444444 3 3579999999999999999999999999999999999888888888875 3332 2222 358
Q ss_pred CEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccc
Q psy15208 867 DIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIE 904 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid 904 (1027)
|++|+++|....+. ..++.|++++.++++|....++.
T Consensus 232 d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~ 268 (339)
T 1rjw_A 232 HAAVVTAVSKPAFQ-SAYNSIRRGGACVLVGLPPEEMP 268 (339)
T ss_dssp EEEEESSCCHHHHH-HHHHHEEEEEEEEECCCCSSEEE
T ss_pred CEEEECCCCHHHHH-HHHHHhhcCCEEEEecccCCCCc
Confidence 99999999865443 55899999999999998754433
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=98.31 E-value=2.1e-07 Score=105.00 Aligned_cols=149 Identities=17% Similarity=0.246 Sum_probs=101.7
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc------cCCEEEecC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK------YGDIFVTCT 873 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~------~aDvvi~at 873 (1027)
...|++|+|+|.|.||..+++.++.+|+ +|++++.++.+...+...|++ +.+ ..+.+. ..|++++++
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~ 243 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAG 243 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECC
Confidence 3579999999999999999999999999 899999999988889999986 433 222221 479999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCCC--cccchhhhhc---cceecccc-ce--eeeecCCCcEEEEecCCccccccCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHFD--NEIEVEKLKK---YKWENIKP-QV--DHIIFPDGKKIILLAEGRLVNLGCG 945 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~d--~eid~~~l~~---~~~~~~~~-~v--~~y~~~dg~~i~LLa~GrlvNl~~~ 945 (1027)
|....+. ..++.|++++.++.+|... ..++++.+.. +....+.. .. .+..+ .+.+.++++|++
T Consensus 244 g~~~~~~-~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~--~~~~~l~~~g~i------ 314 (352)
T 3fpc_A 244 GDVHTFA-QAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRM--ERLIDLVFYKRV------ 314 (352)
T ss_dssp SCTTHHH-HHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHH--HHHHHHHHTTSC------
T ss_pred CChHHHH-HHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHH--HHHHHHHHcCCC------
Confidence 9876444 5589999999999999873 3344332221 11111111 00 01111 245667777777
Q ss_pred CCCCcceEehhhH-hHHHHHHH
Q psy15208 946 TGHPSYVMSSSFA-NQTLAQIE 966 (1027)
Q Consensus 946 ~G~P~~vmd~sf~-~q~la~~~ 966 (1027)
.|..+++..|. +..+...+
T Consensus 315 --~~~~~i~~~~~gl~~~~~A~ 334 (352)
T 3fpc_A 315 --DPSKLVTHVFRGFDNIEKAF 334 (352)
T ss_dssp --CGGGGEEEEEESTTHHHHHH
T ss_pred --ChhHhheeeCCCHHHHHHHH
Confidence 56666777766 55555544
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=98.31 E-value=1.6e-06 Score=100.02 Aligned_cols=92 Identities=22% Similarity=0.247 Sum_probs=74.9
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhH-HHHhhcCcEEc---CHHHHhccCCEEEecCCCc-ccCc
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICA-LQAAMEGFLVV---TMEYAKKYGDIFVTCTGNY-HVIT 880 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~-~~A~~~G~~v~---~~~e~l~~aDvvi~atG~~-~vi~ 880 (1027)
.+.|++|+|+|+|.+|+.+++.++.+|+ +|+++++++.++ ..+...|.++. ++.+.+..+|+||+|||.. .+++
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~~~~~~ 243 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPHPVIH 243 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSSCCBC
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCCCceec
Confidence 3689999999999999999999999999 999999998876 45666787654 4566778899999999865 4567
Q ss_pred HHHHhc--CC----CCeEEEEecC
Q psy15208 881 HDHMRD--MK----DQAIVCNIGH 898 (1027)
Q Consensus 881 ~~~~~~--mk----~gailvNvG~ 898 (1027)
.+.++. || .+.+++|++.
T Consensus 244 ~~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 244 VDDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp HHHHHHHHHHCSSCCCEEEEECCS
T ss_pred HHHHHHHHHhccCCCCEEEEEccC
Confidence 777887 42 5677888876
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.30 E-value=4.4e-07 Score=104.54 Aligned_cols=95 Identities=20% Similarity=0.193 Sum_probs=76.5
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc------cCCEEEecC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK------YGDIFVTCT 873 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~------~aDvvi~at 873 (1027)
...|++|+|+|.|.||..+++.++.+|+ +|++++.++.+...+...|++ +.+ ..+.+. ..|+|++++
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~ 290 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEAT 290 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECC
Confidence 4689999999999999999999999999 999999999999999999986 333 222221 489999999
Q ss_pred CCcccCcHHHHhcC----CCCeEEEEecCCCc
Q psy15208 874 GNYHVITHDHMRDM----KDQAIVCNIGHFDN 901 (1027)
Q Consensus 874 G~~~vi~~~~~~~m----k~gailvNvG~~d~ 901 (1027)
|.........++.| +++|.++.+|....
T Consensus 291 g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~ 322 (404)
T 3ip1_A 291 GVPQLVWPQIEEVIWRARGINATVAIVARADA 322 (404)
T ss_dssp SCHHHHHHHHHHHHHHCSCCCCEEEECSCCCS
T ss_pred CCcHHHHHHHHHHHHhccCCCcEEEEeCCCCC
Confidence 98732333445666 99999999998754
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=2e-07 Score=104.96 Aligned_cols=101 Identities=20% Similarity=0.240 Sum_probs=79.5
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc-----
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK----- 864 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~----- 864 (1027)
+.++. ..++ .|++|+|+|.|.||+.+++.++.+|+ +|++++.++.+...+...|++ +.+ ..+.+.
T Consensus 158 ~~~l~-~~~~--~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g 234 (348)
T 2d8a_A 158 VDTVL-AGPI--SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDG 234 (348)
T ss_dssp HHHHT-TSCC--TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTT
T ss_pred HHHHH-hcCC--CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCC
Confidence 44453 2343 89999999999999999999999999 999999999888888888875 333 222221
Q ss_pred -cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 865 -YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 865 -~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
..|++|+++|....+. ..++.|++++.++++|....
T Consensus 235 ~g~D~vid~~g~~~~~~-~~~~~l~~~G~iv~~g~~~~ 271 (348)
T 2d8a_A 235 NGVDVFLEFSGAPKALE-QGLQAVTPAGRVSLLGLYPG 271 (348)
T ss_dssp SCEEEEEECSCCHHHHH-HHHHHEEEEEEEEECCCCSS
T ss_pred CCCCEEEECCCCHHHHH-HHHHHHhcCCEEEEEccCCC
Confidence 4799999999865444 55899999999999998643
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=98.29 E-value=2.2e-07 Score=104.55 Aligned_cols=92 Identities=15% Similarity=0.093 Sum_probs=76.6
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhC--CCEEEEEcCCchhHHHHhhcCcE-EcCHHH------Hhc---cCCEEEecCCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRAL--SAQVWIIEIDPICALQAAMEGFL-VVTMEY------AKK---YGDIFVTCTGNY 876 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~--Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e------~l~---~aDvvi~atG~~ 876 (1027)
.|++|+|+|.|.||..+++.++.+ |++|++++.++.+...+...|++ +.+..+ .+. ..|+|++++|..
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~ 249 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTE 249 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCCh
Confidence 899999999999999999999999 99999999999888888888985 444322 122 479999999987
Q ss_pred ccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
..+. ..++.|+++|.++.+|....
T Consensus 250 ~~~~-~~~~~l~~~G~iv~~g~~~~ 273 (344)
T 2h6e_A 250 ETTY-NLGKLLAQEGAIILVGMEGK 273 (344)
T ss_dssp HHHH-HHHHHEEEEEEEEECCCCSS
T ss_pred HHHH-HHHHHhhcCCEEEEeCCCCC
Confidence 5444 55899999999999998643
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.29 E-value=1.2e-06 Score=103.83 Aligned_cols=125 Identities=18% Similarity=0.131 Sum_probs=90.1
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCC-cEEEEEcCC----CCCCCCCCCC-----C
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLG-YISIRMNFR----GVGASSGTYD-----S 85 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~G-y~Vla~Dlr----GhG~S~g~~~-----~ 85 (1027)
.++..+|.|... ..+.|++|++||+++..|+.....+ ....|+++| +.|+.+|+| |++.+..... .
T Consensus 84 cl~l~v~~P~~~--~~~~Pviv~iHGGg~~~g~~~~~~~--~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~ 159 (498)
T 2ogt_A 84 GLYLNIWSPAAD--GKKRPVLFWIHGGAFLFGSGSSPWY--DGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQA 159 (498)
T ss_dssp CCEEEEEESCSS--SCCEEEEEEECCSTTTSCCTTCGGG--CCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGTTG
T ss_pred CcEEEEEecCCC--CCCCcEEEEEcCCccCCCCCCCCcC--CHHHHHhCCCEEEEeCCCcCchhhccCchhhccccccCC
Confidence 466677888631 2467999999998766566543222 345666666 999999999 8887765321 2
Q ss_pred ccchHHHHHHHHHHHHHh---CCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 86 GNGETDDMEILLRYIQKK---YPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 86 ~~~~~~Dv~avl~~L~~~---~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
...-+.|...+++|+++. ++. .+|.|+|+|.||.++..++........++++|+.++..
T Consensus 160 ~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 223 (498)
T 2ogt_A 160 GNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSG 223 (498)
T ss_dssp GGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred CCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCc
Confidence 234588999999999875 232 36999999999999988887643333689999999855
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=2.6e-07 Score=103.69 Aligned_cols=106 Identities=18% Similarity=0.150 Sum_probs=83.4
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc----cC
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK----YG 866 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~----~a 866 (1027)
|.++.+. + ...|++|+|+|.|.||..+++.++.+|++|++++.++.+...+...|++ +.+ ..+.+. ..
T Consensus 156 ~~~l~~~-~-~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~ 233 (340)
T 3s2e_A 156 YKGLKVT-D-TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGA 233 (340)
T ss_dssp HHHHHTT-T-CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSE
T ss_pred HHHHHHc-C-CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCC
Confidence 4555333 3 3589999999999999999999999999999999999999889999985 332 222222 57
Q ss_pred CEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccch
Q psy15208 867 DIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEV 905 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~ 905 (1027)
|++++++|....+. ..++.|+++|+++.+|....++.+
T Consensus 234 d~vid~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~ 271 (340)
T 3s2e_A 234 HGVLVTAVSPKAFS-QAIGMVRRGGTIALNGLPPGDFGT 271 (340)
T ss_dssp EEEEESSCCHHHHH-HHHHHEEEEEEEEECSCCSSEEEE
T ss_pred CEEEEeCCCHHHHH-HHHHHhccCCEEEEeCCCCCCCCC
Confidence 99999998876554 558999999999999987544443
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=5.2e-06 Score=90.41 Aligned_cols=156 Identities=8% Similarity=0.051 Sum_probs=90.1
Q ss_pred eEEEEEecCCc--eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCC----
Q psy15208 5 TKFFNINGSVG--ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVG---- 77 (1027)
Q Consensus 5 ~~~i~I~t~dG--~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG---- 77 (1027)
.+.+.+.++.. .+..+++.|++....++.|+|+++||...+. .. ...+.+.|++ .+..|+.+++++-.
T Consensus 13 ~~~~~~~S~~~~~~~~~~vylP~~y~~~~~yPvly~l~G~~~~~-~~----~~~~~~~l~~~~~~ivV~v~~~~~~~~~~ 87 (278)
T 2gzs_A 13 FSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMD-RL----DDELLKQLSEKTPPVIVAVGYQTNLPFDL 87 (278)
T ss_dssp EEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHH-HC----CHHHHHHHTTSCCCEEEEEEESSSSSCCH
T ss_pred eEEEEEEcCCCCceEEEEEECCCCCCCCCCCCEEEEeeChhHHH-HH----HHHHHHHhccCCCeEEEEEcCCCCCcCcc
Confidence 45567777653 6888889997643234578777777742110 11 1124455655 57778888886421
Q ss_pred ------CCCCC-C----------CCccchHHHHH-----HHHHHHHHhCCCC--cEEEEEechhHHHHHHHHHhcCCcCC
Q psy15208 78 ------ASSGT-Y----------DSGNGETDDME-----ILLRYIQKKYPYL--PIILAGFSFGTFVQAKLQKRLDKEIS 133 (1027)
Q Consensus 78 ------~S~g~-~----------~~~~~~~~Dv~-----avl~~L~~~~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~ 133 (1027)
.++.. . ........+.. .++.++...++.+ +++++||||||.+++.++.+ |+ .
T Consensus 88 ~~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~--~ 164 (278)
T 2gzs_A 88 NSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SS--Y 164 (278)
T ss_dssp HHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CS--S
T ss_pred cccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-cc--c
Confidence 11110 0 00011122222 2333444455432 59999999999999999999 98 7
Q ss_pred ccEEEEEccCCCcC----------CC--CCCCCcEEEEEeCCCCCCC
Q psy15208 134 IKILILISVAVKKW----------LI--PEVPKNTIIIHGELDEIIP 168 (1027)
Q Consensus 134 V~gLVli~p~~~~~----------~l--~~i~~PvLiIhG~~D~iVP 168 (1027)
++++++.+|..... .. ..-..|+++.+|+.|...+
T Consensus 165 f~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~d~~~~ 211 (278)
T 2gzs_A 165 FRSYYSASPSLGRGYDALLSRVTAVEPLQFCTKHLAIMEGSATQGDN 211 (278)
T ss_dssp CSEEEEESGGGSTTHHHHHHHHHTSCTTTTTTCEEEEEECCC-----
T ss_pred cCeEEEeCcchhcCcchHHHHHHHhhccCCCCCcEEEEecCcccccc
Confidence 89999999864211 01 1224689999999997653
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.5e-07 Score=108.25 Aligned_cols=93 Identities=19% Similarity=0.171 Sum_probs=76.0
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcEEcCH------HHHhc------cCCEEEecC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFLVVTM------EYAKK------YGDIFVTCT 873 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~v~~~------~e~l~------~aDvvi~at 873 (1027)
...|++|+|+|+|.||..+++.++.+|+ +|++++.++.+...+...|+++++. .+.+. ..|+||+++
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~ 262 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAV 262 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEEECC
Confidence 3589999999999999999999999999 9999999999988888889875432 22221 479999999
Q ss_pred CCccc-------------CcHHHHhcCCCCeEEEEecCC
Q psy15208 874 GNYHV-------------ITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 874 G~~~v-------------i~~~~~~~mk~gailvNvG~~ 899 (1027)
|.... .-.+.++.++++|+++.+|..
T Consensus 263 g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~ 301 (398)
T 2dph_A 263 GFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIY 301 (398)
T ss_dssp CTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCC
T ss_pred CCccccccccccccccHHHHHHHHHHHhcCCEEEEeccc
Confidence 97531 234568999999999999976
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.26 E-value=1.6e-06 Score=102.42 Aligned_cols=125 Identities=18% Similarity=0.101 Sum_probs=86.4
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCC-cEEEEEcCC----CCCCCCCCC--CCccc
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLG-YISIRMNFR----GVGASSGTY--DSGNG 88 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~G-y~Vla~Dlr----GhG~S~g~~--~~~~~ 88 (1027)
.++..+|.|... ....|++|++||+++..|+..... .....|+++| +.|+.+|+| |++.+.... .....
T Consensus 82 cL~l~v~~P~~~--~~~~PviV~iHGGg~~~g~~~~~~--~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~ 157 (489)
T 1qe3_A 82 CLYVNVFAPDTP--SQNLPVMVWIHGGAFYLGAGSEPL--YDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNL 157 (489)
T ss_dssp CCEEEEEEECSS--CCSEEEEEEECCSTTTSCCTTSGG--GCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCH
T ss_pred CCEEEEEeCCCC--CCCCCEEEEECCCccccCCCCCcc--cCHHHHHhcCCEEEEecCccCcccccCccccccccCCCCc
Confidence 477778888752 134799999999876555544322 2345566665 999999999 666554311 12233
Q ss_pred hHHHHHHHHHHHHHhC---C--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 89 ETDDMEILLRYIQKKY---P--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 89 ~~~Dv~avl~~L~~~~---~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
-..|...+++|++... + ..++.|+|||+||.++..++........++++|+.++..
T Consensus 158 gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 158 GLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred chHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 5788999999998752 2 236999999999999988877542222689999998754
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=98.25 E-value=5.8e-07 Score=101.75 Aligned_cols=148 Identities=19% Similarity=0.088 Sum_probs=97.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhcCcEEc----------CHHHHh------ccCCEEE
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAMEGFLVV----------TMEYAK------KYGDIFV 870 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~G~~v~----------~~~e~l------~~aDvvi 870 (1027)
-.|++|+|+|.|.||+.+++.++.+|++ |++++.++.+...+...+-.+. ++.+.+ ...|+++
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvi 257 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVAL 257 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEE
Confidence 5899999999999999999999999997 9999999988887776631211 111222 1479999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCCCccc--chhhhhccceeccccceeeeecCC-CcEEEEecCCccccccCCCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEI--EVEKLKKYKWENIKPQVDHIIFPD-GKKIILLAEGRLVNLGCGTG 947 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~d~ei--d~~~l~~~~~~~~~~~v~~y~~~d-g~~i~LLa~GrlvNl~~~~G 947 (1027)
+++|....+. ..++.|+++|+++.+|...... +...+............ + ..+ .+.+.++++|++
T Consensus 258 d~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~--~-~~~~~~~~~l~~~g~i-------- 325 (363)
T 3m6i_A 258 ECTGVESSIA-AAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYR--Y-CNTWPRAIRLVENGLV-------- 325 (363)
T ss_dssp ECSCCHHHHH-HHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCS--C-SSCHHHHHHHHHTTSS--------
T ss_pred ECCCChHHHH-HHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccC--C-HHHHHHHHHHHHhCCC--------
Confidence 9999875444 4589999999999999875433 33322211111111111 1 111 356667777777
Q ss_pred CCcceEehhhHhHHHHHHHH
Q psy15208 948 HPSYVMSSSFANQTLAQIEL 967 (1027)
Q Consensus 948 ~P~~vmd~sf~~q~la~~~l 967 (1027)
.+..+++..|.+..+...+-
T Consensus 326 ~~~~~i~~~~~l~~~~~A~~ 345 (363)
T 3m6i_A 326 DLTRLVTHRFPLEDALKAFE 345 (363)
T ss_dssp CCGGGEEEEEEGGGHHHHHH
T ss_pred ChHHceeeeeeHHHHHHHHH
Confidence 34445566666655555443
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.25 E-value=3e-07 Score=104.75 Aligned_cols=102 Identities=18% Similarity=0.150 Sum_probs=79.7
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCH------HHHhccCCEE
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTM------EYAKKYGDIF 869 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~------~e~l~~aDvv 869 (1027)
+.++.+. + .-.|++|+|+|.|.||+.+++.++.+|++|++++.++.+...+...|++ +.+. ++....+|+|
T Consensus 184 ~~al~~~-~-~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvv 261 (369)
T 1uuf_A 184 YSPLRHW-Q-AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFI 261 (369)
T ss_dssp HHHHHHT-T-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEE
T ss_pred HHHHHhc-C-CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEE
Confidence 4444443 3 3579999999999999999999999999999999999888888888875 3321 1122357999
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
++++|....+. ..++.|+++|.++.+|....
T Consensus 262 id~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~ 292 (369)
T 1uuf_A 262 LNTVAAPHNLD-DFTTLLKRDGTMTLVGAPAT 292 (369)
T ss_dssp EECCSSCCCHH-HHHTTEEEEEEEEECCCC--
T ss_pred EECCCCHHHHH-HHHHHhccCCEEEEeccCCC
Confidence 99999875444 56899999999999998743
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=3.8e-07 Score=103.19 Aligned_cols=103 Identities=17% Similarity=0.114 Sum_probs=79.7
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh-hcCcE-EcCH------HHHhccCCE
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA-MEGFL-VVTM------EYAKKYGDI 868 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-~~G~~-v~~~------~e~l~~aDv 868 (1027)
|.++.+. +....|++|+|+|.|.||+.+++.++.+|++|++++.++.+...+. ..|++ +.+. .+.....|+
T Consensus 169 ~~~l~~~-~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~ 247 (357)
T 2cf5_A 169 YSPLSHF-GLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDY 247 (357)
T ss_dssp HHHHHHT-STTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEE
T ss_pred HHHHHhc-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCE
Confidence 4444443 4323899999999999999999999999999999999988877777 78875 3321 112235799
Q ss_pred EEecCCCcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 869 FVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 869 vi~atG~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
+++++|....+. ..++.|+++|.++.+|....
T Consensus 248 vid~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~ 279 (357)
T 2cf5_A 248 VIDTVPVHHALE-PYLSLLKLDGKLILMGVINN 279 (357)
T ss_dssp EEECCCSCCCSH-HHHTTEEEEEEEEECSCCSS
T ss_pred EEECCCChHHHH-HHHHHhccCCEEEEeCCCCC
Confidence 999999875454 55899999999999998643
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=1.2e-07 Score=107.70 Aligned_cols=93 Identities=12% Similarity=0.110 Sum_probs=75.2
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc---hhHHHHhhcCcEEcC---HHHHh----ccCCEEEecCCCcc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP---ICALQAAMEGFLVVT---MEYAK----KYGDIFVTCTGNYH 877 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp---~r~~~A~~~G~~v~~---~~e~l----~~aDvvi~atG~~~ 877 (1027)
+.|++|+|+|.|.||+.+++.++.+|++|++++.++ .+...+...|++.++ +.+.+ ...|++|+++|...
T Consensus 179 ~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 258 (366)
T 2cdc_A 179 LNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGADV 258 (366)
T ss_dssp STTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCCT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCChH
Confidence 349999999999999999999999999999999988 787778888886442 11112 34899999999865
Q ss_pred cCcHHHHhcCCCCeEEEEecCCC
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d 900 (1027)
.+....++.|+++|.++++|...
T Consensus 259 ~~~~~~~~~l~~~G~iv~~g~~~ 281 (366)
T 2cdc_A 259 NILGNVIPLLGRNGVLGLFGFST 281 (366)
T ss_dssp HHHHHHGGGEEEEEEEEECSCCC
T ss_pred HHHHHHHHHHhcCCEEEEEecCC
Confidence 44145689999999999999874
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=4e-07 Score=102.36 Aligned_cols=105 Identities=21% Similarity=0.224 Sum_probs=82.0
Q ss_pred HHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhC-CCEEEEEcCCchhHHHHhhcCcE-EcC----HHHHh------
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRAL-SAQVWIIEIDPICALQAAMEGFL-VVT----MEYAK------ 863 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~-Ga~ViV~d~dp~r~~~A~~~G~~-v~~----~~e~l------ 863 (1027)
.|.++.+.......|++|+|+|.|.+|..+++.++.+ |++|++++.++.+...+...|++ +.+ ..+.+
T Consensus 158 a~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g 237 (345)
T 3jv7_A 158 PYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGG 237 (345)
T ss_dssp HHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGG
T ss_pred HHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCC
Confidence 3455555322346899999999999999999999998 67999999999999999999986 322 22221
Q ss_pred ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 864 ~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
...|++++++|....+. ..++.|+++|.++.+|....
T Consensus 238 ~g~d~v~d~~G~~~~~~-~~~~~l~~~G~iv~~G~~~~ 274 (345)
T 3jv7_A 238 QGATAVFDFVGAQSTID-TAQQVVAVDGHISVVGIHAG 274 (345)
T ss_dssp GCEEEEEESSCCHHHHH-HHHHHEEEEEEEEECSCCTT
T ss_pred CCCeEEEECCCCHHHHH-HHHHHHhcCCEEEEECCCCC
Confidence 15799999999876454 55899999999999998643
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=3.4e-07 Score=102.96 Aligned_cols=102 Identities=18% Similarity=0.200 Sum_probs=77.0
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc-----
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK----- 864 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~----- 864 (1027)
+.++.+..++ .|++|+|+|.|.||+.+++.++.+|+ +|++++.++.+...+... .+ +.+ +.+.+.
T Consensus 154 ~~~l~~~~~~--~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~ 230 (343)
T 2dq4_A 154 VHTVYAGSGV--SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGS 230 (343)
T ss_dssp HHHHHSTTCC--TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSS
T ss_pred HHHHHHhCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCC
Confidence 4444423344 89999999999999999999999999 999999988776666555 43 332 222332
Q ss_pred cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcc
Q psy15208 865 YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNE 902 (1027)
Q Consensus 865 ~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~e 902 (1027)
..|++++++|....+. ..++.|+++|.++.+|....+
T Consensus 231 g~D~vid~~g~~~~~~-~~~~~l~~~G~iv~~g~~~~~ 267 (343)
T 2dq4_A 231 GVEVLLEFSGNEAAIH-QGLMALIPGGEARILGIPSDP 267 (343)
T ss_dssp CEEEEEECSCCHHHHH-HHHHHEEEEEEEEECCCCSSC
T ss_pred CCCEEEECCCCHHHHH-HHHHHHhcCCEEEEEecCCCC
Confidence 4799999999865444 568999999999999986433
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=1.7e-06 Score=96.84 Aligned_cols=92 Identities=14% Similarity=0.109 Sum_probs=75.0
Q ss_pred cccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh------ccCCEEEecC
Q psy15208 807 MIAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK------KYGDIFVTCT 873 (1027)
Q Consensus 807 ~l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l------~~aDvvi~at 873 (1027)
.-.|++|+|+| .|.||+.+++.++.+|++|++++.++.+...+...|.+ +.+ ..+.+ ...|++++++
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~ 225 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSV 225 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECC
Confidence 35899999999 79999999999999999999999999888888888875 322 22222 1479999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
|.. . -...++.|+++|.++.+|...
T Consensus 226 g~~-~-~~~~~~~l~~~G~iv~~G~~~ 250 (334)
T 3qwb_A 226 GKD-T-FEISLAALKRKGVFVSFGNAS 250 (334)
T ss_dssp GGG-G-HHHHHHHEEEEEEEEECCCTT
T ss_pred ChH-H-HHHHHHHhccCCEEEEEcCCC
Confidence 973 3 345689999999999999764
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=98.17 E-value=2.3e-06 Score=96.37 Aligned_cols=99 Identities=21% Similarity=0.202 Sum_probs=79.8
Q ss_pred cCCEEEEE-cCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC----HHHHhc-----cCCEEEecCCCcc
Q psy15208 809 AGKIAVII-GYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT----MEYAKK-----YGDIFVTCTGNYH 877 (1027)
Q Consensus 809 ~Gk~VvVi-G~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~----~~e~l~-----~aDvvi~atG~~~ 877 (1027)
.|++|+|+ |.|.||+.+++.++.+|++|++++.++.+...+...|++ +.+ ..+.+. ..|++++|+|...
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~~~ 229 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDM 229 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCCchH
Confidence 79999999 799999999999999999999999999888888888886 332 222221 4799999999765
Q ss_pred cCcHHHHhcCCCCeEEEEecCCCcccchhhh
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFDNEIEVEKL 908 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d~eid~~~l 908 (1027)
.+. ..++.|+++|.++.+|.....++...+
T Consensus 230 ~~~-~~~~~l~~~G~iv~~~~~~~~~~~~~~ 259 (346)
T 3fbg_A 230 YYD-DMIQLVKPRGHIATIVAFENDQDLNAL 259 (346)
T ss_dssp HHH-HHHHHEEEEEEEEESSCCSSCBCGGGG
T ss_pred HHH-HHHHHhccCCEEEEECCCCCCCccccc
Confidence 444 558999999999999877666665544
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=98.16 E-value=8.2e-07 Score=100.73 Aligned_cols=101 Identities=16% Similarity=0.079 Sum_probs=79.2
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc------
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK------ 864 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~------ 864 (1027)
+.++.+..+ .-.|++|+|+|.|.||..+++.++.+|++|++++.++.+...+...|++ +.+ ..+.+.
T Consensus 178 ~~al~~~~~-~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 178 WFALVEKGH-LRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDR 256 (363)
T ss_dssp HHHHTTTTC-CCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTC
T ss_pred HHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCC
Confidence 444433333 3589999999999999999999999999999999999888888888986 332 222221
Q ss_pred cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 865 YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 865 ~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
..|++++++|.. . -...++.|+++|.++.+|...
T Consensus 257 g~D~vid~~g~~-~-~~~~~~~l~~~G~iv~~G~~~ 290 (363)
T 3uog_A 257 GADHILEIAGGA-G-LGQSLKAVAPDGRISVIGVLE 290 (363)
T ss_dssp CEEEEEEETTSS-C-HHHHHHHEEEEEEEEEECCCS
T ss_pred CceEEEECCChH-H-HHHHHHHhhcCCEEEEEecCC
Confidence 479999999943 3 345689999999999999864
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=1.5e-06 Score=96.90 Aligned_cols=101 Identities=17% Similarity=0.168 Sum_probs=78.5
Q ss_pred HHHHhhhcCccccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh------
Q psy15208 797 IDGIKRATDVMIAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK------ 863 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l------ 863 (1027)
+.++.+..+ .-.|++|+|+| .|.||+.+++.++.+|++|++++.++.+...+...|.+ +.+ ..+.+
T Consensus 129 ~~~l~~~~~-~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~ 207 (325)
T 3jyn_A 129 QYLLRQTYQ-VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDG 207 (325)
T ss_dssp HHHHHTTSC-CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTT
T ss_pred HHHHHHhcC-CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCC
Confidence 334433333 35899999999 79999999999999999999999999888888888875 322 22222
Q ss_pred ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 864 ~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
...|++++++|.. .+ ...++.|+++|.++.+|...
T Consensus 208 ~g~Dvvid~~g~~-~~-~~~~~~l~~~G~iv~~g~~~ 242 (325)
T 3jyn_A 208 KKCPVVYDGVGQD-TW-LTSLDSVAPRGLVVSFGNAS 242 (325)
T ss_dssp CCEEEEEESSCGG-GH-HHHHTTEEEEEEEEECCCTT
T ss_pred CCceEEEECCChH-HH-HHHHHHhcCCCEEEEEecCC
Confidence 1479999999974 33 35689999999999999864
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=98.13 E-value=8.6e-06 Score=88.99 Aligned_cols=101 Identities=17% Similarity=0.145 Sum_probs=79.5
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH-HhhcCcEEc-CHHHHhccCCEEEe
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ-AAMEGFLVV-TMEYAKKYGDIFVT 871 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-A~~~G~~v~-~~~e~l~~aDvvi~ 871 (1027)
.++...+.+. +..+.|++|+|+|+|.+|+.+|..+...|++|+++++++.++.+ +...|+++. ++.+++.++|+||.
T Consensus 114 ~G~~~~l~~~-~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~ 192 (275)
T 2hk9_A 114 IGFLKSLKSL-IPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVN 192 (275)
T ss_dssp HHHHHHHHHH-CTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEE
T ss_pred HHHHHHHHHh-CCCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEE
Confidence 4566666543 55689999999999999999999999999999999999876554 334466655 67788889999999
Q ss_pred cCCCcc------cCcHHHHhcCCCCeEEEEecC
Q psy15208 872 CTGNYH------VITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 872 atG~~~------vi~~~~~~~mk~gailvNvG~ 898 (1027)
||+... .+. ++.++++.++++++.
T Consensus 193 atp~~~~~~~~~~i~---~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 193 TTSVGLKDEDPEIFN---YDLIKKDHVVVDIIY 222 (275)
T ss_dssp CSSTTSSTTCCCSSC---GGGCCTTSEEEESSS
T ss_pred eCCCCCCCCCCCCCC---HHHcCCCCEEEEcCC
Confidence 987542 232 456899999999877
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=98.10 E-value=2.9e-06 Score=98.82 Aligned_cols=161 Identities=14% Similarity=0.067 Sum_probs=104.7
Q ss_pred cccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHH-----------------------
Q psy15208 807 MIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEY----------------------- 861 (1027)
Q Consensus 807 ~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e----------------------- 861 (1027)
...|++|+|+|+ |.||+.+++.++.+|++|++++.++.+...+...|++ +.+..+
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAK 297 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHH
Confidence 468999999998 9999999999999999999999999888888888975 332111
Q ss_pred Hh-----ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC---cccchhhhhccceeccccceeeeecCC-CcEEE
Q psy15208 862 AK-----KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD---NEIEVEKLKKYKWENIKPQVDHIIFPD-GKKII 932 (1027)
Q Consensus 862 ~l-----~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d---~eid~~~l~~~~~~~~~~~v~~y~~~d-g~~i~ 932 (1027)
.+ ...|++++++|.. .+ ...+..|+++|.++++|... ..++...+............. ...+ .+.+.
T Consensus 298 ~v~~~~g~g~Dvvid~~G~~-~~-~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~--~~~~~~~~~~ 373 (447)
T 4a0s_A 298 LVVEKAGREPDIVFEHTGRV-TF-GLSVIVARRGGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGA--NHEEQQATNR 373 (447)
T ss_dssp HHHHHHSSCCSEEEECSCHH-HH-HHHHHHSCTTCEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSC--CHHHHHHHHH
T ss_pred HHHHHhCCCceEEEECCCch-HH-HHHHHHHhcCCEEEEEecCCCcccccCHHHHHhCCCEEEecCCC--CHHHHHHHHH
Confidence 11 2489999999975 23 45688999999999999763 234443333222221111111 1111 24567
Q ss_pred EecCCccccccCCCCCCcceEehhhHhHHHHHHHHh-hcCCCCCCcEEeC
Q psy15208 933 LLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELF-NNTSNYPIGIYTL 981 (1027)
Q Consensus 933 LLa~GrlvNl~~~~G~P~~vmd~sf~~q~la~~~l~-~~~~~~~~gv~~l 981 (1027)
++++|++ .| .++..|.+..+...+-. .++....+-|+.+
T Consensus 374 l~~~g~l--------~~--~i~~~~~l~~~~~A~~~~~~~~~~GKvvv~~ 413 (447)
T 4a0s_A 374 LFESGAV--------VP--AMSAVYPLAEAAEACRVVQTSRQVGKVAVLC 413 (447)
T ss_dssp HHHTTSS--------CC--CEEEEEEGGGHHHHHHHHHTTCCSSEEEEES
T ss_pred HHHcCCc--------cc--ceeEEEcHHHHHHHHHHHhcCCCceEEEEEe
Confidence 8888887 33 34566666665555433 3333333444554
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=98.10 E-value=3e-06 Score=93.41 Aligned_cols=91 Identities=15% Similarity=0.125 Sum_probs=72.1
Q ss_pred cccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHH------HHhccCCEEEecCCCccc
Q psy15208 807 MIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTME------YAKKYGDIFVTCTGNYHV 878 (1027)
Q Consensus 807 ~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~------e~l~~aDvvi~atG~~~v 878 (1027)
.-.|++|+|+|+ |.||+.+++.++.+|++|++++.++.+...+...|.+ +.+.. +.+...|++++ +|.. .
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~~-~ 200 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRGK-E 200 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSCT-T
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCHH-H
Confidence 458999999998 9999999999999999999999999888888888875 33322 22346899999 9883 3
Q ss_pred CcHHHHhcCCCCeEEEEecCCC
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~d 900 (1027)
....++.|+++|.++++|...
T Consensus 201 -~~~~~~~l~~~G~~v~~g~~~ 221 (302)
T 1iz0_A 201 -VEESLGLLAHGGRLVYIGAAE 221 (302)
T ss_dssp -HHHHHTTEEEEEEEEEC----
T ss_pred -HHHHHHhhccCCEEEEEeCCC
Confidence 346689999999999999764
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.10 E-value=1.9e-06 Score=97.02 Aligned_cols=101 Identities=17% Similarity=0.105 Sum_probs=78.5
Q ss_pred HHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC------HHHHhc----
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT------MEYAKK---- 864 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~------~~e~l~---- 864 (1027)
+.++.+. + ...|++|+|+|. |.||+.+++.++..|++|++++.++.+...+...|.+ +.+ ..+.+.
T Consensus 159 ~~~l~~~-~-~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~ 236 (347)
T 2hcy_A 159 YKALKSA-N-LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATD 236 (347)
T ss_dssp HHHHHTT-T-CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHT
T ss_pred HHHHHhc-C-CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhC
Confidence 4444443 3 358999999999 8999999999999999999999998887777777764 222 222332
Q ss_pred -cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 865 -YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 865 -~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
..|++|+++|....+ ...++.|+++|.++++|...
T Consensus 237 ~~~D~vi~~~g~~~~~-~~~~~~l~~~G~iv~~g~~~ 272 (347)
T 2hcy_A 237 GGAHGVINVSVSEAAI-EASTRYVRANGTTVLVGMPA 272 (347)
T ss_dssp SCEEEEEECSSCHHHH-HHHTTSEEEEEEEEECCCCT
T ss_pred CCCCEEEECCCcHHHH-HHHHHHHhcCCEEEEEeCCC
Confidence 479999999976543 45589999999999999874
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=98.09 E-value=1.3e-06 Score=97.36 Aligned_cols=101 Identities=11% Similarity=0.116 Sum_probs=78.7
Q ss_pred HHHHHhhhcCccccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC------HHHHhccCC
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT------MEYAKKYGD 867 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~------~~e~l~~aD 867 (1027)
.|.++ +..+ ...|++|+|+| .|.||+.+++.++.+|++|+++. ++.+...+...|++ +.+ ..+.+...|
T Consensus 141 a~~al-~~~~-~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D 217 (321)
T 3tqh_A 141 ALQAL-NQAE-VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAEQCINYHEEDFLLAISTPVD 217 (321)
T ss_dssp HHHHH-HHTT-CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEE
T ss_pred HHHHH-HhcC-CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCCEEEeCCCcchhhhhccCCC
Confidence 34455 3223 46899999997 99999999999999999999886 45566678888886 332 344445789
Q ss_pred EEEecCCCcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 868 IFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 868 vvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
++++++|.... ...++.|+++|.++.+|....
T Consensus 218 ~v~d~~g~~~~--~~~~~~l~~~G~iv~~g~~~~ 249 (321)
T 3tqh_A 218 AVIDLVGGDVG--IQSIDCLKETGCIVSVPTITA 249 (321)
T ss_dssp EEEESSCHHHH--HHHGGGEEEEEEEEECCSTTH
T ss_pred EEEECCCcHHH--HHHHHhccCCCEEEEeCCCCc
Confidence 99999998764 667999999999999987643
|
| >2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} | Back alignment and structure |
|---|
Probab=98.09 E-value=1e-05 Score=91.88 Aligned_cols=130 Identities=18% Similarity=0.209 Sum_probs=100.2
Q ss_pred CccceEeecccccccccccchhhhhhHHHHHh---hhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCc--
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDGIK---RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDP-- 843 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~---r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp-- 843 (1027)
+.+|+++ |...||+--...++. +.++..+...+|||+|.|..|.++|+.+.++|+ +|+++|.+-
T Consensus 155 ~~ipvf~----------DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli 224 (398)
T 2a9f_A 155 CHIPVFH----------DDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGII 224 (398)
T ss_dssp CSSCEEE----------HHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEEC
T ss_pred CCcceec----------chhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcc
Confidence 6789986 566788776555543 355777888999999999999999999999999 999999873
Q ss_pred -------hh---HHHHhhcC--cEEcCHHHHhccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhhc
Q psy15208 844 -------IC---ALQAAMEG--FLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKK 910 (1027)
Q Consensus 844 -------~r---~~~A~~~G--~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~ 910 (1027)
.+ ...|.... -...+++++++.+|++|-+++ +++++++.++.|+++.++.-..-...|+..+...+
T Consensus 225 ~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG~Sa-pgl~T~EmVk~Ma~~pIIfalsNPt~E~~pe~a~~ 302 (398)
T 2a9f_A 225 NEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIGVSA-PGVLKAEWISKMAARPVIFAMANPIPEIYPDEALE 302 (398)
T ss_dssp CTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEECCS-TTCCCHHHHHTSCSSCEEEECCSSSCSSCHHHHHT
T ss_pred cCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEecCC-CCCCCHHHHHhhCCCCEEEECCCCCccCCHHHHHH
Confidence 11 11222211 013458899999999999886 88999999999999999999888766777665443
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=1.5e-05 Score=86.42 Aligned_cols=101 Identities=21% Similarity=0.341 Sum_probs=77.9
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH-HhhcCcEEcCHHHHhccCCEEEec
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ-AAMEGFLVVTMEYAKKYGDIFVTC 872 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-A~~~G~~v~~~~e~l~~aDvvi~a 872 (1027)
.++...+.+. +..+.| +++|+|+|.+|+.+|+.++..|++|+++++++.++.. +...|....+++++ .++|+||.|
T Consensus 102 ~g~~~~l~~~-~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~~~~~~~~-~~~Divi~~ 178 (263)
T 2d5c_A 102 PGFLEALKAG-GIPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLRAVPLEKA-REARLLVNA 178 (263)
T ss_dssp HHHHHHHHHT-TCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCEECCGGGG-GGCSEEEEC
T ss_pred HHHHHHHHHh-CCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccchhhHhhc-cCCCEEEEc
Confidence 3555555543 556889 9999999999999999999999999999999876543 33445555567777 899999999
Q ss_pred CCCc------ccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 873 TGNY------HVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 873 tG~~------~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
|+.. ..+. .+.+++|.++++++..+
T Consensus 179 tp~~~~~~~~~~l~---~~~l~~g~~viD~~~~p 209 (263)
T 2d5c_A 179 TRVGLEDPSASPLP---AELFPEEGAAVDLVYRP 209 (263)
T ss_dssp SSTTTTCTTCCSSC---GGGSCSSSEEEESCCSS
T ss_pred cCCCCCCCCCCCCC---HHHcCCCCEEEEeecCC
Confidence 9765 2333 46789999999988653
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.07 E-value=3.2e-06 Score=95.52 Aligned_cols=101 Identities=15% Similarity=0.155 Sum_probs=78.7
Q ss_pred HHHHhhhcCccccCCEEEEE-cCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc-----
Q psy15208 797 IDGIKRATDVMIAGKIAVII-GYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK----- 864 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvVi-G~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~----- 864 (1027)
|.++.+..+ .-.|++|+|+ |.|.||+.+++.++..|++|++++.++.+...+...|++ +.+ ..+.+.
T Consensus 156 ~~~l~~~~~-~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~ 234 (353)
T 4dup_A 156 WANLFQMAG-LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQ 234 (353)
T ss_dssp HHHHTTTTC-CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSS
T ss_pred HHHHHHhcC-CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCC
Confidence 344433333 3589999999 679999999999999999999999999888888888875 322 222222
Q ss_pred cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 865 YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 865 ~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
..|++++++|... ....++.|+++|.++++|...
T Consensus 235 g~Dvvid~~g~~~--~~~~~~~l~~~G~iv~~g~~~ 268 (353)
T 4dup_A 235 GVDIILDMIGAAY--FERNIASLAKDGCLSIIAFLG 268 (353)
T ss_dssp CEEEEEESCCGGG--HHHHHHTEEEEEEEEECCCTT
T ss_pred CceEEEECCCHHH--HHHHHHHhccCCEEEEEEecC
Confidence 4799999999763 345689999999999999764
|
| >4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=1.4e-05 Score=87.81 Aligned_cols=91 Identities=27% Similarity=0.359 Sum_probs=77.1
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.++..-+. ..+..+.||+|+|+|-+. +|+-+|..|...||.|+++...- .++.+..++|||||
T Consensus 162 Tp~gv~~lL~-~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T-------------~dl~~~~~~ADIvV 227 (303)
T 4b4u_A 162 TPAGIMTILK-ENNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT-------------QNLPELVKQADIIV 227 (303)
T ss_dssp HHHHHHHHHH-HTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SSHHHHHHTCSEEE
T ss_pred cHHHHHHHHH-HHCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCC-------------CCHHHHhhcCCeEE
Confidence 4455555444 458889999999999999 89999999999999999996532 35778889999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.|+|.+++++.+ ++|+|++++++|..
T Consensus 228 ~A~G~p~~i~~d---~vk~GavVIDVGin 253 (303)
T 4b4u_A 228 GAVGKAELIQKD---WIKQGAVVVDAGFH 253 (303)
T ss_dssp ECSCSTTCBCGG---GSCTTCEEEECCCB
T ss_pred eccCCCCccccc---cccCCCEEEEecee
Confidence 999999999976 58999999999975
|
| >1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6 | Back alignment and structure |
|---|
Probab=98.06 E-value=5.5e-06 Score=93.32 Aligned_cols=91 Identities=21% Similarity=0.245 Sum_probs=74.2
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchh-HHHHhhcCcEEcCHHHHhccCCEEEecCCCcc---cCcHHH
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPIC-ALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYH---VITHDH 883 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r-~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~---vi~~~~ 883 (1027)
+.+++|+|||+|.+|..+|+.++..|.+|+++++++.+ ...+...|+.+.++++++.++|+|+.|+.... ++..+.
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~~~~aDvVilavp~~~~~~v~~~~i 93 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEFQGRLYKEEI 93 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHHHHHHHHHHT
T ss_pred hcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHHHhcCCEEEEeCCcHHHHHHHHHHH
Confidence 67889999999999999999999999999999998765 45677789887788899999999999987543 222122
Q ss_pred HhcCCCCeEEEEecC
Q psy15208 884 MRDMKDQAIVCNIGH 898 (1027)
Q Consensus 884 ~~~mk~gailvNvG~ 898 (1027)
...|+++++|+.++.
T Consensus 94 ~~~l~~~~ivi~~~g 108 (338)
T 1np3_A 94 EPNLKKGATLAFAHG 108 (338)
T ss_dssp GGGCCTTCEEEESCC
T ss_pred HhhCCCCCEEEEcCC
Confidence 346899999998754
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.05 E-value=3.7e-06 Score=94.52 Aligned_cols=101 Identities=17% Similarity=0.213 Sum_probs=74.8
Q ss_pred HHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cC----HHHHhc------
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VT----MEYAKK------ 864 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~----~~e~l~------ 864 (1027)
+.++.+..+ ...|++|+|+|+ |.||+.+++.++.+|++|++++.++.+...+...|++. .+ ..+.+.
T Consensus 148 ~~~l~~~~~-~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~ 226 (342)
T 4eye_A 148 YFAYARRGQ-LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGA 226 (342)
T ss_dssp HHHHHTTSC-CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTS
T ss_pred HHHHHHhcC-CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCC
Confidence 344433333 358999999998 99999999999999999999999998888888888762 21 222221
Q ss_pred cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 865 YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 865 ~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
..|++++++|... -...++.|+++|.++.+|...
T Consensus 227 g~Dvvid~~g~~~--~~~~~~~l~~~G~iv~~G~~~ 260 (342)
T 4eye_A 227 GVDMVVDPIGGPA--FDDAVRTLASEGRLLVVGFAA 260 (342)
T ss_dssp CEEEEEESCC--C--HHHHHHTEEEEEEEEEC----
T ss_pred CceEEEECCchhH--HHHHHHhhcCCCEEEEEEccC
Confidence 4799999999862 345689999999999999764
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.03 E-value=3e-05 Score=87.05 Aligned_cols=165 Identities=12% Similarity=0.060 Sum_probs=102.0
Q ss_pred eEEEEEecC--CceEEEEEEecCCccc-cCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh------CCcEEEEEcCCC
Q psy15208 5 TKFFNINGS--VGILHCAINFPSSIKL-LKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS------LGYISIRMNFRG 75 (1027)
Q Consensus 5 ~~~i~I~t~--dG~I~~~l~~P~~~~~-~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~------~Gy~Vla~DlrG 75 (1027)
.+.+.+.++ +.+..+.++.|++... .+..|+|+++||.. .+. ....+.+.+.. ..+-|+.++...
T Consensus 12 v~~~~~~S~~l~~~r~~~VylP~~y~~~~~~yPVlylldG~~----~f~--~~~~~~~~l~~~~~~~~~~~IvV~i~~~~ 85 (331)
T 3gff_A 12 YQSKRLESRLLKETREYVIALPEGYAQSLEAYPVVYLLDGED----QFD--HMASLLQFLSQGTMPQIPKVIIVGIHNTN 85 (331)
T ss_dssp EEEEEEEETTTTEEEEEEEECCTTGGGSCCCEEEEEESSHHH----HHH--HHHHHHHHHTCSSSCSSCCCEEEEECCSS
T ss_pred EEEEEEEecCCCCeEEEEEEeCCCCCCCCCCccEEEEecChh----hhH--HHHHHHHHHHhhhhcCCCCEEEEEECCCC
Confidence 344556654 3478888999987432 35689999999941 111 12345566653 257788877521
Q ss_pred CC--CCCC--------C-----C---CCccchHHHH-HHHHHHHHHhCCCC-cEEEEEechhHHHHHHHHHhcCCcCCcc
Q psy15208 76 VG--ASSG--------T-----Y---DSGNGETDDM-EILLRYIQKKYPYL-PIILAGFSFGTFVQAKLQKRLDKEISIK 135 (1027)
Q Consensus 76 hG--~S~g--------~-----~---~~~~~~~~Dv-~avl~~L~~~~~~~-pviLVGhSmGG~vAl~~A~~~p~~~~V~ 135 (1027)
+. .++. . + .....+...+ ..++.++...++.. ..+++||||||..++.++.++|+ .++
T Consensus 86 R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~p~--~F~ 163 (331)
T 3gff_A 86 RMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDRP--LFS 163 (331)
T ss_dssp HHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTTCS--SCS
T ss_pred cccccCCCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhCch--hhh
Confidence 11 0110 0 0 0111222222 35666677776542 24789999999999999999999 789
Q ss_pred EEEEEccCCCcC---C----------CCCCCCcEEEEEeCCCC-------CCChHHHHhhhC
Q psy15208 136 ILILISVAVKKW---L----------IPEVPKNTIIIHGELDE-------IIPLKDVFLWAN 177 (1027)
Q Consensus 136 gLVli~p~~~~~---~----------l~~i~~PvLiIhG~~D~-------iVP~~~~~~l~~ 177 (1027)
+++.++|....- . ......|+++.||+.|. .++.+...++.+
T Consensus 164 ~~~~~S~~~w~~~~~~~~~~~~~~~~~~~~~~~l~l~~G~~d~~~~~~~~~~~~~~~~~l~~ 225 (331)
T 3gff_A 164 AYLALDTSLWFDSPHYLTLLEERVVKGDFKQKQLFMAIANNPLSPGFGVSSYHKDLNLAFAD 225 (331)
T ss_dssp EEEEESCCTTTTTTHHHHHHHHHHHHCCCSSEEEEEEECCCSEETTTEECCHHHHHHHHHHH
T ss_pred eeeEeCchhcCChHHHHHHHHHHhhcccCCCCeEEEEeCCCCCCCccchHHHHHHHHHHHHH
Confidence 999999876210 0 12245799999999998 355555554443
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=1.3e-05 Score=95.88 Aligned_cols=125 Identities=17% Similarity=0.107 Sum_probs=85.1
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHH-hCCcEEEEEcCC----CCCCCCCCCCCccchH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVML-SLGYISIRMNFR----GVGASSGTYDSGNGET 90 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La-~~Gy~Vla~Dlr----GhG~S~g~~~~~~~~~ 90 (1027)
.++.-+|.|.......+.|++|++||+++..|+... +.. ..|+ ..|+.|+.+|+| |++.+.........-.
T Consensus 98 cl~lnv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~--~~~--~~la~~~g~vvv~~nYRlg~~gf~~~~~~~~~~n~gl 173 (542)
T 2h7c_A 98 CLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAAST--YDG--LALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGH 173 (542)
T ss_dssp CCEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTT--SCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHH
T ss_pred CcEEEEEECCCCCCCCCCCEEEEECCCcccCCCccc--cCH--HHHHhcCCEEEEecCCCCccccCCCCCcccCccchhH
Confidence 466678888753222467999999998766665543 221 1243 369999999999 4444332111222347
Q ss_pred HHHHHHHHHHHHh---CCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 91 DDMEILLRYIQKK---YPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 91 ~Dv~avl~~L~~~---~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
.|...+++|+++. ++. .+|.|+|+|.||.++..++........++++|+.++..
T Consensus 174 ~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 232 (542)
T 2h7c_A 174 LDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 232 (542)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCc
Confidence 8999999999874 333 36999999999999988887632223689999998754
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=5.6e-06 Score=92.55 Aligned_cols=102 Identities=20% Similarity=0.132 Sum_probs=78.7
Q ss_pred HHHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHH-hhcCcE-EcC-----HHHHhc---
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQA-AMEGFL-VVT-----MEYAKK--- 864 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A-~~~G~~-v~~-----~~e~l~--- 864 (1027)
.|.++.+..+ .-.|++|+|+|+ |.||+.+++.++.+|++|++++.++.+...+ ...|++ +.+ ..+.+.
T Consensus 137 A~~al~~~~~-~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 215 (336)
T 4b7c_A 137 AYFALLDVGQ-PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKREC 215 (336)
T ss_dssp HHHHHHHTTC-CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHC
T ss_pred HHHHHHHhcC-CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhc
Confidence 3455534334 358999999999 9999999999999999999999999888877 777875 222 222221
Q ss_pred --cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 865 --YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 865 --~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
..|++++++|.. .....++.|++++.++.+|...
T Consensus 216 ~~~~d~vi~~~g~~--~~~~~~~~l~~~G~iv~~G~~~ 251 (336)
T 4b7c_A 216 PKGIDVFFDNVGGE--ILDTVLTRIAFKARIVLCGAIS 251 (336)
T ss_dssp TTCEEEEEESSCHH--HHHHHHTTEEEEEEEEECCCGG
T ss_pred CCCceEEEECCCcc--hHHHHHHHHhhCCEEEEEeecc
Confidence 379999999964 2345689999999999999764
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.01 E-value=7.1e-06 Score=98.40 Aligned_cols=126 Identities=23% Similarity=0.230 Sum_probs=85.3
Q ss_pred eEEEEEEec-----CCccccCC----ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCC----CCCCCCC
Q psy15208 16 ILHCAINFP-----SSIKLLKL----KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRG----VGASSGT 82 (1027)
Q Consensus 16 ~I~~~l~~P-----~~~~~~~~----~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrG----hG~S~g~ 82 (1027)
.++.-+|.| .... ..+ .|++|++||+++..|+..... .....|+++|+.|+.+|+|. +..+...
T Consensus 90 cL~lnv~~P~~~~~~~~~-~~~~~~~~Pviv~iHGGg~~~g~~~~~~--~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~ 166 (551)
T 2fj0_A 90 CIHANIHVPYYALPRDAA-DKNRFAGLPVLVFIHGGGFAFGSGDSDL--HGPEYLVSKDVIVITFNYRLNVYGFLSLNST 166 (551)
T ss_dssp CCEEEEEEEGGGCCCC---------CEEEEEEECCSTTTSCCSCTTT--CBCTTGGGGSCEEEEECCCCHHHHHCCCSSS
T ss_pred CeEEEEEecCcccccccc-ccCcCCCCCEEEEEcCCccccCCCcccc--cCHHHHHhCCeEEEEeCCcCCccccccCccc
Confidence 567777788 4211 133 799999999877666654321 23456777899999999994 2222211
Q ss_pred CCCccchHHHHHHHHHHHHHh---CCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 83 YDSGNGETDDMEILLRYIQKK---YPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 83 ~~~~~~~~~Dv~avl~~L~~~---~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
......-+.|...+++|+++. ++. .+|.|+|+|.||.++..++........++++|+.++..
T Consensus 167 ~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 167 SVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 112234579999999999875 332 35999999999999988887632223689999998754
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=2.6e-06 Score=95.82 Aligned_cols=102 Identities=15% Similarity=0.222 Sum_probs=78.6
Q ss_pred HHHHHhhhcCccccCCEEEEEcCC-hhHHHHHHHHHhC-CCEEEEEcCCchhHHHHhhcCcE-EcC---------HHHHh
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIGYG-DVGKGSAQAMRAL-SAQVWIIEIDPICALQAAMEGFL-VVT---------MEYAK 863 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG~G-~IG~~vA~~a~~~-Ga~ViV~d~dp~r~~~A~~~G~~-v~~---------~~e~l 863 (1027)
.+.++.+ .+ ...|++|+|+|.| .||+.+++.++.. |++|++++.++.+...+...|.+ +.+ +.+..
T Consensus 159 a~~~l~~-~~-~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 236 (347)
T 1jvb_A 159 TYRAVRK-AS-LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRIT 236 (347)
T ss_dssp HHHHHHH-TT-CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHT
T ss_pred HHHHHHh-cC-CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHh
Confidence 3455544 23 3589999999999 9999999999999 99999999999888777777864 222 11222
Q ss_pred --ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 864 --KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 864 --~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
...|++|+++|....+. ..++.|++++.++.+|...
T Consensus 237 ~~~~~d~vi~~~g~~~~~~-~~~~~l~~~G~iv~~g~~~ 274 (347)
T 1jvb_A 237 ESKGVDAVIDLNNSEKTLS-VYPKALAKQGKYVMVGLFG 274 (347)
T ss_dssp TTSCEEEEEESCCCHHHHT-TGGGGEEEEEEEEECCSSC
T ss_pred cCCCceEEEECCCCHHHHH-HHHHHHhcCCEEEEECCCC
Confidence 24799999999875444 3488999999999999764
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=5e-06 Score=94.54 Aligned_cols=91 Identities=12% Similarity=0.032 Sum_probs=73.3
Q ss_pred ccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc-----cCCEEEecCCC
Q psy15208 808 IAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK-----YGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~-----~aDvvi~atG~ 875 (1027)
..|++|+|+|. |.||+.+++.++.+|++|+++. ++.+...+...|++ +.+ ..+.+. ..|++++++|.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~ 241 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITN 241 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCS
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCc
Confidence 58999999999 8999999999999999998874 78888889999986 332 222222 38999999998
Q ss_pred cccCcHHHHhcC-CCCeEEEEecCCC
Q psy15208 876 YHVITHDHMRDM-KDQAIVCNIGHFD 900 (1027)
Q Consensus 876 ~~vi~~~~~~~m-k~gailvNvG~~d 900 (1027)
...+. ..++.| +++|+++.+|.+.
T Consensus 242 ~~~~~-~~~~~l~~~~G~iv~~g~~~ 266 (371)
T 3gqv_A 242 VESTT-FCFAAIGRAGGHYVSLNPFP 266 (371)
T ss_dssp HHHHH-HHHHHSCTTCEEEEESSCCC
T ss_pred hHHHH-HHHHHhhcCCCEEEEEecCc
Confidence 76444 457888 6999999999653
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.99 E-value=4.3e-06 Score=93.78 Aligned_cols=108 Identities=10% Similarity=0.078 Sum_probs=81.7
Q ss_pred HHHHHhhhcCccccCCEEEEEcCC-hhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh-----
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIGYG-DVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK----- 863 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG~G-~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l----- 863 (1027)
.+.++.+..+ ...|++|+|+|+| .||+.+++.++.+|++|++++.++.+...+...|.+ +.+ ..+.+
T Consensus 132 a~~~~~~~~~-~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~ 210 (340)
T 3gms_A 132 AWVTCTETLN-LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTN 210 (340)
T ss_dssp HHHHHHTTSC-CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTT
T ss_pred HHHHHHHhcc-cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhC
Confidence 3444444334 3589999999998 899999999999999999999999888888888876 322 22222
Q ss_pred -ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC-cccchh
Q psy15208 864 -KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD-NEIEVE 906 (1027)
Q Consensus 864 -~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d-~eid~~ 906 (1027)
...|++++++|.... .+.++.|+++|.++.+|... .++++.
T Consensus 211 ~~g~Dvvid~~g~~~~--~~~~~~l~~~G~iv~~G~~~~~~~~~~ 253 (340)
T 3gms_A 211 GIGADAAIDSIGGPDG--NELAFSLRPNGHFLTIGLLSGIQVNWA 253 (340)
T ss_dssp TSCEEEEEESSCHHHH--HHHHHTEEEEEEEEECCCTTSCCCCHH
T ss_pred CCCCcEEEECCCChhH--HHHHHHhcCCCEEEEEeecCCCCCCHH
Confidence 147999999998753 34568899999999999863 344443
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.99 E-value=6.3e-06 Score=92.80 Aligned_cols=90 Identities=14% Similarity=0.033 Sum_probs=73.2
Q ss_pred ccC-CEEEEE-cCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh------ccCCEEEecC
Q psy15208 808 IAG-KIAVII-GYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK------KYGDIFVTCT 873 (1027)
Q Consensus 808 l~G-k~VvVi-G~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l------~~aDvvi~at 873 (1027)
..| ++|+|. |.|.||+.+++.++.+|++|++++.++.+...+...|++ +.+ ..+.+ ...|++++++
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~ 241 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAV 241 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESS
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECC
Confidence 455 677776 899999999999999999999999999998888888875 332 22222 2589999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|...+ ...++.|+++|.++++|..
T Consensus 242 g~~~~--~~~~~~l~~~G~iv~~G~~ 265 (349)
T 3pi7_A 242 TGPLA--SAIFNAMPKRARWIIYGRL 265 (349)
T ss_dssp CHHHH--HHHHHHSCTTCEEEECCCS
T ss_pred CChhH--HHHHhhhcCCCEEEEEecc
Confidence 98753 5678999999999999965
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.99 E-value=1.4e-05 Score=89.14 Aligned_cols=92 Identities=17% Similarity=0.189 Sum_probs=76.6
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCCCcccCcH-----H
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTGNYHVITH-----D 882 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG~~~vi~~-----~ 882 (1027)
..++|+|||+|.+|..+|+.+...|.+|+++|+++.+.......|..+ .++++++.++|+||.|++....+.. +
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~ 109 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQG 109 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTTC
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcchh
Confidence 467999999999999999999999999999999998887777778875 5788999999999999986532222 2
Q ss_pred HHhcCCCCeEEEEecCCC
Q psy15208 883 HMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~d 900 (1027)
.++.++++.++++++...
T Consensus 110 ~~~~l~~~~~vi~~st~~ 127 (320)
T 4dll_A 110 VAAAMKPGSLFLDMASIT 127 (320)
T ss_dssp HHHHCCTTCEEEECSCCC
T ss_pred HHhhCCCCCEEEecCCCC
Confidence 345689999999998764
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=97.99 E-value=1.9e-05 Score=94.23 Aligned_cols=125 Identities=22% Similarity=0.148 Sum_probs=86.9
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCC----CCCCCCCCC-CCccch
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFR----GVGASSGTY-DSGNGE 89 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~Dlr----GhG~S~g~~-~~~~~~ 89 (1027)
.++.-+|.|... ..+.|++|++||+++..|+.....+ ....|++ .|+.|+.+++| |+..+.+.. .....-
T Consensus 92 cl~lnv~~P~~~--~~~~Pv~v~iHGGg~~~g~~~~~~~--~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~g 167 (529)
T 1p0i_A 92 CLYLNVWIPAPK--PKNATVLIWIYGGGFQTGTSSLHVY--DGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMG 167 (529)
T ss_dssp CCEEEEEEESSC--CSSEEEEEEECCSTTTSCCTTCGGG--CTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHH
T ss_pred CCeEEEeeCCCC--CCCCeEEEEECCCccccCCCCcccc--ChHHHhccCCeEEEEecccccccccccCCCCCCCcCccc
Confidence 466677888652 1467999999998776666544222 2345555 69999999999 444432111 122345
Q ss_pred HHHHHHHHHHHHHh---CCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 90 TDDMEILLRYIQKK---YPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 90 ~~Dv~avl~~L~~~---~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
+.|...+++|+++. ++.+ +|.|+|+|.||.++..++........++++|+.++..
T Consensus 168 l~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 168 LFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 78999999999874 3333 5999999999999988887643233689999998764
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.6e-05 Score=86.94 Aligned_cols=90 Identities=16% Similarity=0.084 Sum_probs=75.0
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCCCcccCc------HHH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTGNYHVIT------HDH 883 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG~~~vi~------~~~ 883 (1027)
++|+|||+|.+|..+|+.++..|.+|+++|+++.+.......|... .++++++..+|+||.|+++...+. .+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 6899999999999999999999999999999998888777778875 478899999999999998642222 222
Q ss_pred HhcCCCCeEEEEecCCC
Q psy15208 884 MRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d 900 (1027)
.+.++++.++++++...
T Consensus 82 ~~~l~~~~~vi~~st~~ 98 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVD 98 (287)
T ss_dssp HHHCCTTCEEEECSCCC
T ss_pred hhcCCCCCEEEeCCCCC
Confidence 46689999999997754
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.98 E-value=3.3e-05 Score=84.22 Aligned_cols=106 Identities=15% Similarity=0.158 Sum_probs=76.9
Q ss_pred hhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH-HhhcC----cEEcCHHHHh-ccC
Q psy15208 793 RESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ-AAMEG----FLVVTMEYAK-KYG 866 (1027)
Q Consensus 793 ~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-A~~~G----~~v~~~~e~l-~~a 866 (1027)
+.++...+.+ .+..+.|++|+|+|.|.+|+.+|..|...|++|+++++++.++.. +...+ +.+.+.++.. ..+
T Consensus 103 ~~G~~~~L~~-~~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~ 181 (271)
T 1nyt_A 103 GVGLLSDLER-LSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEF 181 (271)
T ss_dssp HHHHHHHHHH-HTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCC
T ss_pred HHHHHHHHHh-cCcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCC
Confidence 4667777655 355689999999999999999999999999999999999876543 22222 3344444333 489
Q ss_pred CEEEecCCCccc-----CcHHHHhcCCCCeEEEEecCCCcc
Q psy15208 867 DIFVTCTGNYHV-----ITHDHMRDMKDQAIVCNIGHFDNE 902 (1027)
Q Consensus 867 Dvvi~atG~~~v-----i~~~~~~~mk~gailvNvG~~d~e 902 (1027)
|+||++||.... +. .+.++++.+++++...+.+
T Consensus 182 DivVn~t~~~~~~~~~~i~---~~~l~~~~~v~D~~y~p~~ 219 (271)
T 1nyt_A 182 DLIINATSSGISGDIPAIP---SSLIHPGIYCYDMFYQKGK 219 (271)
T ss_dssp SEEEECCSCGGGTCCCCCC---GGGCCTTCEEEESCCCSSC
T ss_pred CEEEECCCCCCCCCCCCCC---HHHcCCCCEEEEeccCCcC
Confidence 999999986532 22 2346788889888776543
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.98 E-value=2e-06 Score=98.25 Aligned_cols=92 Identities=23% Similarity=0.194 Sum_probs=75.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH--------HHhc------cCCEEEe
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME--------YAKK------YGDIFVT 871 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~--------e~l~------~aDvvi~ 871 (1027)
..|++|+|+|.|.||+.+++.|+.+|+ +|++++.++.+...+...|++ +++.. +.+. ..|+|++
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid 273 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILE 273 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEE
Confidence 579999999999999999999999995 999999999888888888985 33221 1121 4799999
Q ss_pred cCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 872 CTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 872 atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
++|....+. ..++.|+++|.++.+|...
T Consensus 274 ~~g~~~~~~-~~~~~l~~~G~iv~~G~~~ 301 (380)
T 1vj0_A 274 ATGDSRALL-EGSELLRRGGFYSVAGVAV 301 (380)
T ss_dssp CSSCTTHHH-HHHHHEEEEEEEEECCCCS
T ss_pred CCCCHHHHH-HHHHHHhcCCEEEEEecCC
Confidence 999765444 5589999999999999764
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=97.97 E-value=1.3e-05 Score=95.99 Aligned_cols=126 Identities=20% Similarity=0.185 Sum_probs=84.8
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCC----CCCCCCCCC-CCccch
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFR----GVGASSGTY-DSGNGE 89 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~Dlr----GhG~S~g~~-~~~~~~ 89 (1027)
.++.-+|.|.... ..+.|++|++||+++..|+.....+ ....|++ .|+.|+.+|+| |++.+.+.. .....-
T Consensus 96 cl~l~v~~P~~~~-~~~~Pviv~iHGGg~~~g~~~~~~~--~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~n~g 172 (543)
T 2ha2_A 96 CLYLNVWTPYPRP-ASPTPVLIWIYGGGFYSGAASLDVY--DGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVG 172 (543)
T ss_dssp CCEEEEEEESSCC-SSCEEEEEEECCSTTTCCCTTSGGG--CTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHH
T ss_pred CCeEEEeecCCCC-CCCCeEEEEECCCccccCCCCCCcC--ChHHHHhcCCEEEEEecccccccccccCCCCCCCCCccc
Confidence 3566677786421 2356999999998876666543222 2345554 69999999999 344432111 122345
Q ss_pred HHHHHHHHHHHHHh---CCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 90 TDDMEILLRYIQKK---YPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 90 ~~Dv~avl~~L~~~---~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
+.|...+++|+++. ++. .+|.|+|+|.||.++..++........++++|+.++..
T Consensus 173 l~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 173 LLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred HHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 88999999999875 232 36999999999999887776532122689999998754
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.9e-05 Score=87.71 Aligned_cols=93 Identities=10% Similarity=-0.020 Sum_probs=76.7
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCCCcccCcH-----
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTGNYHVITH----- 881 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG~~~vi~~----- 881 (1027)
..-++|+|||+|.+|..+|+.++..|.+|+++|+++.+.......|... .++++++..+|+||.|++....+..
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~ 98 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDK 98 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHST
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCc
Confidence 3457899999999999999999999999999999998888777788875 4788999999999999976532221
Q ss_pred -HHHhcCCCCeEEEEecCCC
Q psy15208 882 -DHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 882 -~~~~~mk~gailvNvG~~d 900 (1027)
+.+..++++.++++++...
T Consensus 99 ~~l~~~l~~g~~vv~~st~~ 118 (310)
T 3doj_A 99 GGVLEQICEGKGYIDMSTVD 118 (310)
T ss_dssp TCGGGGCCTTCEEEECSCCC
T ss_pred hhhhhccCCCCEEEECCCCC
Confidence 2245689999999998754
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=2.1e-05 Score=87.65 Aligned_cols=91 Identities=15% Similarity=0.195 Sum_probs=75.3
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCchhHHHHhhcCc--E-EcCHHH-HhccCCEEEecCCCcc---cCc
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDPICALQAAMEGF--L-VVTMEY-AKKYGDIFVTCTGNYH---VIT 880 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~~A~~~G~--~-v~~~~e-~l~~aDvvi~atG~~~---vi~ 880 (1027)
-++|+|||+|.+|..+|+.++..|. +|+++|+++.+...+...|+ . ..++++ ++.++|+||.|+.... ++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl- 111 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIA- 111 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGGHHHHH-
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHHHHHHH-
Confidence 4799999999999999999999999 99999999988888888887 3 346778 8899999999987543 22
Q ss_pred HHHHhcCCCCeEEEEecCCCc
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~ 901 (1027)
.+....+++++++++++....
T Consensus 112 ~~l~~~l~~~~iv~d~~Svk~ 132 (314)
T 3ggo_A 112 KKLSYILSEDATVTDQGSVKG 132 (314)
T ss_dssp HHHHHHSCTTCEEEECCSCCT
T ss_pred HHHhhccCCCcEEEECCCCcH
Confidence 233456899999999987653
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=4.1e-06 Score=93.96 Aligned_cols=101 Identities=16% Similarity=0.091 Sum_probs=77.1
Q ss_pred HHHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh-hcCcE-EcC------HHHHhc--
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAA-MEGFL-VVT------MEYAKK-- 864 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-~~G~~-v~~------~~e~l~-- 864 (1027)
.|.++.+..+ ...|++|+|+|+ |.||+.+++.++.+|++|++++.++.+...+. ..|.+ +.+ ..+.+.
T Consensus 143 a~~al~~~~~-~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~ 221 (345)
T 2j3h_A 143 AYAGFYEVCS-PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRC 221 (345)
T ss_dssp HHHHHHTTSC-CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHH
T ss_pred HHHHHHHHhC-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHH
Confidence 3455544334 358999999997 99999999999999999999999988877776 57764 222 222222
Q ss_pred ---cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 865 ---YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 865 ---~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
..|++++++|.. . ....++.|+++|.++.+|..
T Consensus 222 ~~~~~d~vi~~~g~~-~-~~~~~~~l~~~G~~v~~G~~ 257 (345)
T 2j3h_A 222 FPNGIDIYFENVGGK-M-LDAVLVNMNMHGRIAVCGMI 257 (345)
T ss_dssp CTTCEEEEEESSCHH-H-HHHHHTTEEEEEEEEECCCG
T ss_pred hCCCCcEEEECCCHH-H-HHHHHHHHhcCCEEEEEccc
Confidence 479999999874 3 34568999999999999975
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.95 E-value=9e-06 Score=91.28 Aligned_cols=101 Identities=14% Similarity=0.044 Sum_probs=77.2
Q ss_pred HHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh------
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK------ 863 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l------ 863 (1027)
+.++.+..+ ...|++|+|+|. |.||+.+++.++.+|++|++++.++.+...+...|.+ +.+ ..+.+
T Consensus 155 ~~al~~~~~-~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~ 233 (343)
T 2eih_A 155 WQMVVDKLG-VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGG 233 (343)
T ss_dssp HHHHTTTSC-CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTT
T ss_pred HHHHHHhcC-CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCC
Confidence 344443323 357999999999 9999999999999999999999999888777777764 322 11222
Q ss_pred ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 864 ~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
...|++|+++| .. .....++.|++++.++.+|...
T Consensus 234 ~~~d~vi~~~g-~~-~~~~~~~~l~~~G~~v~~g~~~ 268 (343)
T 2eih_A 234 KGADKVVDHTG-AL-YFEGVIKATANGGRIAIAGASS 268 (343)
T ss_dssp TCEEEEEESSC-SS-SHHHHHHHEEEEEEEEESSCCC
T ss_pred CCceEEEECCC-HH-HHHHHHHhhccCCEEEEEecCC
Confidence 14799999999 44 3446689999999999999864
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.94 E-value=5e-06 Score=94.35 Aligned_cols=98 Identities=16% Similarity=0.134 Sum_probs=77.6
Q ss_pred cCCEEEEEc-CChhHHHHHHHHHh-CCCEEEEEcCCchhHHHHhhcCcE-EcC----HHHHhc-----cCCEEEecCCCc
Q psy15208 809 AGKIAVIIG-YGDVGKGSAQAMRA-LSAQVWIIEIDPICALQAAMEGFL-VVT----MEYAKK-----YGDIFVTCTGNY 876 (1027)
Q Consensus 809 ~Gk~VvViG-~G~IG~~vA~~a~~-~Ga~ViV~d~dp~r~~~A~~~G~~-v~~----~~e~l~-----~aDvvi~atG~~ 876 (1027)
.|++|+|+| .|.||..+++.++. .|++|++++.++.+...+...|++ +.+ ..+.+. ..|+|++|+|..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g~~ 250 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTD 250 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCCch
Confidence 799999999 99999999999998 589999999999888889999986 333 222222 479999999987
Q ss_pred ccCcHHHHhcCCCCeEEEEecCCCcccchhhh
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHFDNEIEVEKL 908 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~d~eid~~~l 908 (1027)
..+. ..++.|+++|.++.+|.. ..++...+
T Consensus 251 ~~~~-~~~~~l~~~G~iv~~g~~-~~~~~~~~ 280 (363)
T 4dvj_A 251 KHAA-EIADLIAPQGRFCLIDDP-SAFDIMLF 280 (363)
T ss_dssp HHHH-HHHHHSCTTCEEEECSCC-SSCCGGGG
T ss_pred hhHH-HHHHHhcCCCEEEEECCC-CccchHHH
Confidence 5444 558999999999999753 34554433
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=97.93 E-value=3.5e-06 Score=98.51 Aligned_cols=162 Identities=16% Similarity=0.097 Sum_probs=104.4
Q ss_pred cccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHH----------------------HH
Q psy15208 807 MIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTME----------------------YA 862 (1027)
Q Consensus 807 ~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~----------------------e~ 862 (1027)
...|++|+|+|+ |.||..+++.++.+|++|++++.++.+...+...|++ +++.. +.
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence 358999999998 9999999999999999999998899888889889985 32210 12
Q ss_pred h------ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC---cccchhhhhccceeccccceeeeecCC-CcEEE
Q psy15208 863 K------KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD---NEIEVEKLKKYKWENIKPQVDHIIFPD-GKKII 932 (1027)
Q Consensus 863 l------~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d---~eid~~~l~~~~~~~~~~~v~~y~~~d-g~~i~ 932 (1027)
+ ...|+|++++|.. .+. ..++.|+++|.++.+|... .+++...+.............. ..+ ...+.
T Consensus 306 i~~~t~g~g~Dvvid~~G~~-~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~ 381 (456)
T 3krt_A 306 IRELTGGEDIDIVFEHPGRE-TFG-ASVFVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFAN--YREAWEANR 381 (456)
T ss_dssp HHHHHTSCCEEEEEECSCHH-HHH-HHHHHEEEEEEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCC--HHHHHHHHH
T ss_pred HHHHhCCCCCcEEEEcCCch-hHH-HHHHHhhCCcEEEEEecCCCcccccCHHHHHhcCeEEEEeccCC--HHHHHHHHH
Confidence 1 2579999999983 344 5589999999999999753 2445443332222222111111 111 13567
Q ss_pred EecCCccccccCCCCCCcceEehhhHhHHHHHHHHh-hcCCCCCCcEEeCC
Q psy15208 933 LLAEGRLVNLGCGTGHPSYVMSSSFANQTLAQIELF-NNTSNYPIGIYTLP 982 (1027)
Q Consensus 933 LLa~GrlvNl~~~~G~P~~vmd~sf~~q~la~~~l~-~~~~~~~~gv~~lp 982 (1027)
++++|++ .| .++..|.+..+...+-. ..+....+-|+.++
T Consensus 382 l~~~g~l--------~~--~i~~~~~l~~~~eA~~~l~~~~~~GKvvv~~~ 422 (456)
T 3krt_A 382 LIAKGRI--------HP--TLSKVYSLEDTGQAAYDVHRNLHQGKVGVLCL 422 (456)
T ss_dssp HHHTTSS--------CC--CEEEEEEGGGHHHHHHHHHTTCSSSEEEEESS
T ss_pred HHHcCCc--------cc--ceeEEEcHHHHHHHHHHHHhCCCCCcEEEEeC
Confidence 8888887 23 34555666655554433 33333333444443
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=2.8e-05 Score=85.09 Aligned_cols=88 Identities=14% Similarity=0.025 Sum_probs=68.1
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc-----------C--------------cE-EcCHHHHhc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME-----------G--------------FL-VVTMEYAKK 864 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~-----------G--------------~~-v~~~~e~l~ 864 (1027)
++|+|+|+|.+|.++|+.++..|.+|+++|+++.+...+... | +. ..++++++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 789999999999999999999999999999999776554432 2 23 456778899
Q ss_pred cCCEEEecCCCc----ccCcHHHHhcCCCCeEEEEecC
Q psy15208 865 YGDIFVTCTGNY----HVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 865 ~aDvvi~atG~~----~vi~~~~~~~mk~gailvNvG~ 898 (1027)
++|+||+|++.. ..+-.+..+.+++++++++.+.
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS 122 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSS 122 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence 999999998753 2223344566899999995443
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=97.91 E-value=1.7e-05 Score=94.72 Aligned_cols=125 Identities=18% Similarity=0.140 Sum_probs=86.4
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHH-hCCcEEEEEcCC----CCCCCCCCC-CCccch
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVML-SLGYISIRMNFR----GVGASSGTY-DSGNGE 89 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La-~~Gy~Vla~Dlr----GhG~S~g~~-~~~~~~ 89 (1027)
.++.-+|.|... ..+.|++|++||+++..|+.....+ ....|+ +.|+.|+.+++| |+..+++.. .....-
T Consensus 94 cl~lnv~~P~~~--~~~~Pv~v~iHGG~~~~g~~~~~~~--~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~g 169 (537)
T 1ea5_A 94 CLYLNIWVPSPR--PKSTTVMVWIYGGGFYSGSSTLDVY--NGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVG 169 (537)
T ss_dssp CCEEEEEECSSC--CSSEEEEEEECCSTTTCCCTTCGGG--CTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHH
T ss_pred CCeEEEeccCCC--CCCCeEEEEECCCcccCCCCCCCcc--ChHHHHhcCCEEEEEeccCccccccccCCCCCCCcCccc
Confidence 466677888652 2467999999998876666554222 234555 679999999999 443331111 122345
Q ss_pred HHHHHHHHHHHHHh---CCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 90 TDDMEILLRYIQKK---YPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 90 ~~Dv~avl~~L~~~---~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
+.|...+++|+++. ++. .+|.|+|+|.||..+..++........++++|+.++..
T Consensus 170 l~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 170 LLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred cHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 89999999999875 333 36999999999999888776532222689999998764
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.91 E-value=1.6e-05 Score=90.99 Aligned_cols=101 Identities=20% Similarity=0.236 Sum_probs=79.1
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcEEcC------HHHHhc-----
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFLVVT------MEYAKK----- 864 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~v~~------~~e~l~----- 864 (1027)
|.++.+ .+ ...|++|+|+|.|.||..+++.++.+|+ +|++++.++.+...+...|+++++ +.+.+.
T Consensus 175 ~~al~~-~~-~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g 252 (398)
T 1kol_A 175 YHGAVT-AG-VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGE 252 (398)
T ss_dssp HHHHHH-TT-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSS
T ss_pred HHHHHH-cC-CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCC
Confidence 444443 23 3589999999999999999999999999 799999999998889999987543 222221
Q ss_pred -cCCEEEecCCCccc--------------CcHHHHhcCCCCeEEEEecCC
Q psy15208 865 -YGDIFVTCTGNYHV--------------ITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 865 -~aDvvi~atG~~~v--------------i~~~~~~~mk~gailvNvG~~ 899 (1027)
..|+||+++|.... .-.+.++.++++|.++.+|..
T Consensus 253 ~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~ 302 (398)
T 1kol_A 253 PEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLY 302 (398)
T ss_dssp SCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCC
T ss_pred CCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccc
Confidence 37999999997531 223568999999999999975
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=4.6e-06 Score=93.59 Aligned_cols=95 Identities=17% Similarity=0.151 Sum_probs=75.7
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhC-CCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc------cCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRAL-SAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK------YGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~-Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~------~aDvvi~atG 874 (1027)
..|++|+|+|.|.+|..+++.++.+ |++|++++.++.|...+...|++ +.+ ..+.+. .+|++++++|
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~ 241 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAV 241 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECCS
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEecc
Confidence 6899999999999999999999865 67999999999999889999986 222 222221 3588899998
Q ss_pred CcccCcHHHHhcCCCCeEEEEecCCCccc
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGHFDNEI 903 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~~d~ei 903 (1027)
....+. ..++.+++++.++.+|......
T Consensus 242 ~~~~~~-~~~~~l~~~G~~v~~g~~~~~~ 269 (348)
T 4eez_A 242 ARIAFE-QAVASLKPMGKMVAVAVPNTEM 269 (348)
T ss_dssp CHHHHH-HHHHTEEEEEEEEECCCCSCEE
T ss_pred Ccchhh-eeheeecCCceEEEEeccCCCC
Confidence 877555 4589999999999999875433
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.90 E-value=2e-05 Score=87.03 Aligned_cols=91 Identities=18% Similarity=0.174 Sum_probs=74.5
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE--cCHHHHhccCCEEEecCCCcccCcH------
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV--VTMEYAKKYGDIFVTCTGNYHVITH------ 881 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v--~~~~e~l~~aDvvi~atG~~~vi~~------ 881 (1027)
.++|+|||+|.+|..+|+.++..|.+|+++|+++.+.......|... .++++++..+|+||.|++....+..
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 36899999999999999999999999999999998877777777654 5788889999999999987532222
Q ss_pred HHHhcCCCCeEEEEecCCC
Q psy15208 882 DHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d 900 (1027)
+..+.++++.+++|++...
T Consensus 87 ~l~~~l~~g~ivv~~st~~ 105 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTIS 105 (303)
T ss_dssp CCGGGSCTTCEEEECSCCC
T ss_pred hHHhhCCCCCEEEecCCCC
Confidence 1235689999999998754
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.7e-05 Score=86.84 Aligned_cols=90 Identities=11% Similarity=0.047 Sum_probs=74.6
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCCCcccCcH------HH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTGNYHVITH------DH 883 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG~~~vi~~------~~ 883 (1027)
++|+|+|+|.+|..+|+.++..|.+|+++|+++.+.......|..+. ++++++..+|+||.|+.....+.. +.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 47999999999999999999999999999999988877777788754 788899999999999987532222 22
Q ss_pred HhcCCCCeEEEEecCCC
Q psy15208 884 MRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d 900 (1027)
++.++++.++++++...
T Consensus 82 ~~~l~~g~~vv~~st~~ 98 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVD 98 (287)
T ss_dssp GGTCCTTCEEEECSCCC
T ss_pred hhcccCCCEEEECCCCC
Confidence 45689999999998764
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.4e-05 Score=88.58 Aligned_cols=95 Identities=15% Similarity=0.053 Sum_probs=77.2
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCCCcc----cCcH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTGNYH----VITH 881 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG~~~----vi~~ 881 (1027)
+...++|+|||+|.+|..+|+.++..|.+|+++|+++.+...+...|... .++.+++.++|+||.+++... ++..
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 85 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLGM 85 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcc
Confidence 34567899999999999999999999999999999998877777778875 478899999999999987653 3321
Q ss_pred HHHhcCCCCeEEEEecCCCc
Q psy15208 882 DHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d~ 901 (1027)
+.+..+++|.+++|++....
T Consensus 86 ~~l~~~~~g~ivid~st~~~ 105 (306)
T 3l6d_A 86 PGVARALAHRTIVDYTTNAQ 105 (306)
T ss_dssp TTHHHHTTTCEEEECCCCCT
T ss_pred cchhhccCCCEEEECCCCCH
Confidence 13455789999999987643
|
| >3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I* | Back alignment and structure |
|---|
Probab=97.89 E-value=1.1e-05 Score=93.75 Aligned_cols=92 Identities=21% Similarity=0.166 Sum_probs=74.4
Q ss_pred cccC-CEEEEEcCChhHHHHHHHHHhC------CCEEEEEcCC-chhHHHHhhcCcEE-----cCHHHHhccCCEEEecC
Q psy15208 807 MIAG-KIAVIIGYGDVGKGSAQAMRAL------SAQVWIIEID-PICALQAAMEGFLV-----VTMEYAKKYGDIFVTCT 873 (1027)
Q Consensus 807 ~l~G-k~VvViG~G~IG~~vA~~a~~~------Ga~ViV~d~d-p~r~~~A~~~G~~v-----~~~~e~l~~aDvvi~at 873 (1027)
.+.| |+|+|||+|.+|.++|+.|+.. |.+|+|.+.. +.....|...|+.+ .++.++++++|+||.++
T Consensus 50 ~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaV 129 (525)
T 3fr7_A 50 AFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLI 129 (525)
T ss_dssp HTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECS
T ss_pred HhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECC
Confidence 4789 9999999999999999999998 9998876554 44455677889875 67899999999999998
Q ss_pred CCc---ccCcHHHHhcCCCCeEEEEecCC
Q psy15208 874 GNY---HVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 874 G~~---~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
... .++. +.+..||+|++|+.+..+
T Consensus 130 P~~~~~eVl~-eI~p~LK~GaILs~AaGf 157 (525)
T 3fr7_A 130 SDAAQADNYE-KIFSHMKPNSILGLSHGF 157 (525)
T ss_dssp CHHHHHHHHH-HHHHHSCTTCEEEESSSH
T ss_pred ChHHHHHHHH-HHHHhcCCCCeEEEeCCC
Confidence 754 3454 567889999997655444
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.89 E-value=4.4e-06 Score=94.57 Aligned_cols=105 Identities=16% Similarity=0.163 Sum_probs=78.1
Q ss_pred HHHHhhh-cCccccCCEEEEEcCChhHHHHHHHHHhC-CCEEEEEcCCchhHHHHhhcCcE-EcCH----HHHh---c--
Q psy15208 797 IDGIKRA-TDVMIAGKIAVIIGYGDVGKGSAQAMRAL-SAQVWIIEIDPICALQAAMEGFL-VVTM----EYAK---K-- 864 (1027)
Q Consensus 797 ~~~i~r~-t~~~l~Gk~VvViG~G~IG~~vA~~a~~~-Ga~ViV~d~dp~r~~~A~~~G~~-v~~~----~e~l---~-- 864 (1027)
+.++.+. .+ ...|++|+|+|.|.||..+++.++.+ |++|++++.++.+...+...|++ +.+. .+.+ .
T Consensus 174 ~~al~~~~~~-~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~v~~~~~g 252 (359)
T 1h2b_A 174 YRAVKKAART-LYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRG 252 (359)
T ss_dssp HHHHHHHHTT-CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTT
T ss_pred HHHHHhhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccchHHHHHHHHhCC
Confidence 4444442 23 35799999999999999999999999 99999999999888888899985 3332 1221 1
Q ss_pred -cCCEEEecCCCcc--cCcHHHHhcCCCCeEEEEecCCCc-ccch
Q psy15208 865 -YGDIFVTCTGNYH--VITHDHMRDMKDQAIVCNIGHFDN-EIEV 905 (1027)
Q Consensus 865 -~aDvvi~atG~~~--vi~~~~~~~mk~gailvNvG~~d~-eid~ 905 (1027)
..|++++++|... .+.. .++. ++|.++.+|.... +++.
T Consensus 253 ~g~Dvvid~~G~~~~~~~~~-~~~~--~~G~~v~~g~~~~~~~~~ 294 (359)
T 1h2b_A 253 RGVNVAMDFVGSQATVDYTP-YLLG--RMGRLIIVGYGGELRFPT 294 (359)
T ss_dssp CCEEEEEESSCCHHHHHHGG-GGEE--EEEEEEECCCSSCCCCCH
T ss_pred CCCcEEEECCCCchHHHHHH-Hhhc--CCCEEEEEeCCCCCCCCH
Confidence 4799999999874 4443 3555 8999999997643 3443
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.88 E-value=2.8e-05 Score=88.25 Aligned_cols=96 Identities=11% Similarity=0.092 Sum_probs=76.1
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccC---CEEEecCCCcccC
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYG---DIFVTCTGNYHVI 879 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~a---Dvvi~atG~~~vi 879 (1027)
++.++.+.+|+|||+|.+|..+|+.+...|.+|+++|+++.+...+...|+.. .++++++..+ |+||.+++... +
T Consensus 16 ~~~Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~-v 94 (358)
T 4e21_A 16 ENLYFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAV-V 94 (358)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGG-H
T ss_pred chhhhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHH-H
Confidence 35677889999999999999999999999999999999998887777778764 4788888888 99999987652 2
Q ss_pred c---HHHHhcCCCCeEEEEecCCC
Q psy15208 880 T---HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 880 ~---~~~~~~mk~gailvNvG~~d 900 (1027)
. .+.+..++++.++++++...
T Consensus 95 ~~vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 95 DSMLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp HHHHHHHGGGCCTTCEEEECSSCC
T ss_pred HHHHHHHHhhCCCCCEEEeCCCCC
Confidence 2 23356689999999998764
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.88 E-value=5.8e-05 Score=83.47 Aligned_cols=105 Identities=14% Similarity=0.121 Sum_probs=77.0
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHH-HhhcCc---EEc---CHHHHhcc
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQ-AAMEGF---LVV---TMEYAKKY 865 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~-A~~~G~---~v~---~~~e~l~~ 865 (1027)
.++...+.+..+..+.|++|+|+|+|.+|+.+|..|+..|+ +|+|+++++.++.. +...+. ++. ++.+.+.+
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~ 204 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAE 204 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGG
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhcc
Confidence 45566655432156889999999999999999999999998 99999999877654 333343 343 34566778
Q ss_pred CCEEEecCCCccc-------CcHHHHhcCCCCeEEEEecCCCc
Q psy15208 866 GDIFVTCTGNYHV-------ITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 866 aDvvi~atG~~~v-------i~~~~~~~mk~gailvNvG~~d~ 901 (1027)
+|+||+||+.... +. .+.++++.+++++...+.
T Consensus 205 aDivIn~t~~~~~~~~~~~~i~---~~~l~~~~~v~D~~y~P~ 244 (297)
T 2egg_A 205 YDIIINTTSVGMHPRVEVQPLS---LERLRPGVIVSDIIYNPL 244 (297)
T ss_dssp CSEEEECSCTTCSSCCSCCSSC---CTTCCTTCEEEECCCSSS
T ss_pred CCEEEECCCCCCCCCCCCCCCC---HHHcCCCCEEEEcCCCCC
Confidence 9999999975421 22 345788999999877543
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.5e-05 Score=88.25 Aligned_cols=100 Identities=11% Similarity=0.078 Sum_probs=73.6
Q ss_pred HHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cC-HHHHhccCCEEEecC
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VT-MEYAKKYGDIFVTCT 873 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~-~~e~l~~aDvvi~at 873 (1027)
.+.++ +..+ ...|++|+|+|+|.||+.+++.++.+|++|++++ ++.+...+...|++. .+ .++.-...|++++++
T Consensus 131 a~~al-~~~~-~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~d~~ 207 (315)
T 3goh_A 131 AWQAF-EKIP-LTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVTQKYFAIFDAV 207 (315)
T ss_dssp HHHHH-TTSC-CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCCSCEEEEECC-
T ss_pred HHHHH-hhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhCCCccEEEECC
Confidence 34555 3333 3589999999999999999999999999999999 888888899999873 32 111113579999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
|.... ...++.|+++|.++.+|...
T Consensus 208 g~~~~--~~~~~~l~~~G~~v~~g~~~ 232 (315)
T 3goh_A 208 NSQNA--AALVPSLKANGHIICIQDRI 232 (315)
T ss_dssp --------TTGGGEEEEEEEEEECCC-
T ss_pred CchhH--HHHHHHhcCCCEEEEEeCCC
Confidence 98764 45689999999999998653
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.85 E-value=1.5e-05 Score=89.04 Aligned_cols=101 Identities=16% Similarity=0.130 Sum_probs=76.7
Q ss_pred HHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh------
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK------ 863 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l------ 863 (1027)
+.++.+..+ ...|++|+|+|. |.||+.+++.++..|++|++++.++.+...+...|.+ +.+ ..+.+
T Consensus 134 ~~~l~~~~~-~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~ 212 (333)
T 1wly_A 134 QYLLHQTHK-VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGG 212 (333)
T ss_dssp HHHHHTTSC-CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTT
T ss_pred HHHHHHhhC-CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCC
Confidence 344443323 358999999995 9999999999999999999999998777777777764 222 11222
Q ss_pred ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 864 ~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
...|++|+++|. .. ....++.|+++|.++.+|...
T Consensus 213 ~~~d~vi~~~g~-~~-~~~~~~~l~~~G~iv~~g~~~ 247 (333)
T 1wly_A 213 KGVDVVYDSIGK-DT-LQKSLDCLRPRGMCAAYGHAS 247 (333)
T ss_dssp CCEEEEEECSCT-TT-HHHHHHTEEEEEEEEECCCTT
T ss_pred CCCeEEEECCcH-HH-HHHHHHhhccCCEEEEEecCC
Confidence 147999999998 33 346689999999999999764
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=2.4e-05 Score=88.24 Aligned_cols=101 Identities=14% Similarity=0.093 Sum_probs=77.0
Q ss_pred HHHHhhhcCccccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh------
Q psy15208 797 IDGIKRATDVMIAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK------ 863 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l------ 863 (1027)
+.++.+..+ ...|++|+|+| .|.||+.+++.++..|++|++++.++.+...+...|.+ +.+ ..+.+
T Consensus 151 ~~al~~~~~-~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 229 (354)
T 2j8z_A 151 FQLLHLVGN-VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKG 229 (354)
T ss_dssp HHHHTTTSC-CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTT
T ss_pred HHHHHHhcC-CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcC
Confidence 344433333 35799999999 69999999999999999999999999887777777764 222 11222
Q ss_pred ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 864 ~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
...|++|+++|.. .+ ...++.|+++|.++.+|...
T Consensus 230 ~~~d~vi~~~G~~-~~-~~~~~~l~~~G~iv~~G~~~ 264 (354)
T 2j8z_A 230 AGVNLILDCIGGS-YW-EKNVNCLALDGRWVLYGLMG 264 (354)
T ss_dssp SCEEEEEESSCGG-GH-HHHHHHEEEEEEEEECCCTT
T ss_pred CCceEEEECCCch-HH-HHHHHhccCCCEEEEEeccC
Confidence 1479999999986 33 35589999999999999763
|
| >1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A | Back alignment and structure |
|---|
Probab=97.84 E-value=8.6e-06 Score=94.16 Aligned_cols=97 Identities=15% Similarity=0.176 Sum_probs=66.9
Q ss_pred cCcc-ccCCEEEEEcCChhHHHHHHHHHh-CCCEEEEE-cCCchhHHHHhhcCcEEcCHHHHhccC---CEEEecCCCcc
Q psy15208 804 TDVM-IAGKIAVIIGYGDVGKGSAQAMRA-LSAQVWII-EIDPICALQAAMEGFLVVTMEYAKKYG---DIFVTCTGNYH 877 (1027)
Q Consensus 804 t~~~-l~Gk~VvViG~G~IG~~vA~~a~~-~Ga~ViV~-d~dp~r~~~A~~~G~~v~~~~e~l~~a---Dvvi~atG~~~ 877 (1027)
.+.. +.||+|+|+|+|.||+.+|+++++ +||+|+.+ |.+.. ....+-+++++++..+ +.+.....+.+
T Consensus 205 ~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~------~~~~~gvdl~~L~~~~d~~~~l~~l~~t~~ 278 (419)
T 1gtm_A 205 LGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGG------IYNPDGLNADEVLKWKNEHGSVKDFPGATN 278 (419)
T ss_dssp TTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCE------EEEEEEECHHHHHHHHHHHSSSTTCTTSEE
T ss_pred hCCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCcc------ccCccCCCHHHHHHHHHhcCEeecCccCee
Confidence 4667 999999999999999999999999 99999987 55431 0011123455554422 32222234566
Q ss_pred cCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++.+.|..||. .+++|++..+ .+|.+.+.
T Consensus 279 -i~~~~l~~mk~-dilIn~ArG~-~Vde~a~~ 307 (419)
T 1gtm_A 279 -ITNEELLELEV-DVLAPAAIEE-VITKKNAD 307 (419)
T ss_dssp -ECHHHHHHSCC-SEEEECSCSC-CBCTTGGG
T ss_pred -eCHHHHHhCCC-CEEEECCCcc-cCCHHHHH
Confidence 78888999998 6999999863 45555443
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.84 E-value=3.4e-05 Score=83.94 Aligned_cols=89 Identities=16% Similarity=0.247 Sum_probs=72.2
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCchhHHHHhhcCcE---EcCHHHHhc-cCCEEEecCCCcc---cCcH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDPICALQAAMEGFL---VVTMEYAKK-YGDIFVTCTGNYH---VITH 881 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~~A~~~G~~---v~~~~e~l~-~aDvvi~atG~~~---vi~~ 881 (1027)
++|+|+|+|.+|..+|+.++..|. +|+++|+++.+...+...|.. ..+.++++. .+|+||.|++... ++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~- 80 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAK- 80 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHHH-
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHHHHHHHHH-
Confidence 579999999999999999999998 999999999887777777863 346778888 9999999997553 222
Q ss_pred HHHhcCCCCeEEEEecCCC
Q psy15208 882 DHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d 900 (1027)
+....+++++++++++...
T Consensus 81 ~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 81 KLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp HHHHHSCTTCEEEECCSCC
T ss_pred HHHhhCCCCcEEEECCCCc
Confidence 2345689999999987654
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.83 E-value=1.2e-05 Score=89.63 Aligned_cols=101 Identities=14% Similarity=0.105 Sum_probs=76.1
Q ss_pred HHHHhhhcCccccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc-----
Q psy15208 797 IDGIKRATDVMIAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK----- 864 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~----- 864 (1027)
+.++.+..+ ...|++|+|+| .|.||+.+++.++..|++|++++.++.+...+...|.+ +.+ ..+.+.
T Consensus 129 ~~al~~~~~-~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 207 (327)
T 1qor_A 129 YYLLRKTYE-IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGG 207 (327)
T ss_dssp HHHHHTTSC-CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTT
T ss_pred HHHHHHhhC-CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCC
Confidence 344443323 35799999999 69999999999999999999999998887777777764 222 112221
Q ss_pred -cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 865 -YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 865 -~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
..|++|+++| ... ....++.|++++.++.+|...
T Consensus 208 ~~~D~vi~~~g-~~~-~~~~~~~l~~~G~iv~~g~~~ 242 (327)
T 1qor_A 208 KKVRVVYDSVG-RDT-WERSLDCLQRRGLMVSFGNSS 242 (327)
T ss_dssp CCEEEEEECSC-GGG-HHHHHHTEEEEEEEEECCCTT
T ss_pred CCceEEEECCc-hHH-HHHHHHHhcCCCEEEEEecCC
Confidence 3799999999 433 345689999999999999763
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.83 E-value=2.6e-05 Score=85.99 Aligned_cols=89 Identities=15% Similarity=0.128 Sum_probs=75.3
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCCCcc----cCcHHHH
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTGNYH----VITHDHM 884 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG~~~----vi~~~~~ 884 (1027)
-++|+|||+|.+|..+|+.++..|.+|+++|+++.+...+...|.... ++++++. +|+||.|+++.. ++ .+..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 368999999999999999999999999999999988887777888754 6888888 999999998642 33 3446
Q ss_pred hcCCCCeEEEEecCCC
Q psy15208 885 RDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d 900 (1027)
+.++++.++++.+...
T Consensus 93 ~~l~~g~ivv~~st~~ 108 (296)
T 3qha_A 93 GHAKPGTVIAIHSTIS 108 (296)
T ss_dssp TTCCTTCEEEECSCCC
T ss_pred HhcCCCCEEEEeCCCC
Confidence 7799999999998764
|
| >3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=5.5e-05 Score=86.51 Aligned_cols=92 Identities=25% Similarity=0.238 Sum_probs=76.1
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCC------chhHHHHhhcCcEEcCHHHHhccCCEEEecCCCc---c
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEID------PICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNY---H 877 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~d------p~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~---~ 877 (1027)
.|.||+|+|||||.-|++-|+-||..|.+|+|-=+. ......|..+|+++.+.+++++.||+|+..++.. .
T Consensus 34 ~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~~~~eA~~~ADvV~~L~PD~~q~~ 113 (491)
T 3ulk_A 34 YLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHSD 113 (491)
T ss_dssp GGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEEEHHHHGGGCSEEEECSCGGGHHH
T ss_pred HHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEecCHHHHHHhCCEEEEeCChhhHHH
Confidence 489999999999999999999999999999986331 1245678999999999999999999999877643 3
Q ss_pred cCcHHHHhcCCCCeEEEEecCC
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+. ++....||+|+.|+..-.|
T Consensus 114 vy-~~I~p~lk~G~~L~faHGF 134 (491)
T 3ulk_A 114 VV-RTVQPLMKDGAALGYSHGF 134 (491)
T ss_dssp HH-HHHGGGSCTTCEEEESSCH
T ss_pred HH-HHHHhhCCCCCEEEecCcc
Confidence 44 3567889999999876544
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=2e-05 Score=78.14 Aligned_cols=71 Identities=15% Similarity=0.144 Sum_probs=56.7
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh-hcCcEEc--C------HHHH-hccCCEEEecCCCc
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA-MEGFLVV--T------MEYA-KKYGDIFVTCTGNY 876 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-~~G~~v~--~------~~e~-l~~aDvvi~atG~~ 876 (1027)
...+++|+|+|+|.+|+.+|+.|+..|.+|+++|+++.+...+. ..|..+. + +.++ +..+|+||.++++.
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~ 95 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD 95 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc
Confidence 46789999999999999999999999999999999998776655 5676533 1 2222 56799999999876
Q ss_pred c
Q psy15208 877 H 877 (1027)
Q Consensus 877 ~ 877 (1027)
.
T Consensus 96 ~ 96 (155)
T 2g1u_A 96 S 96 (155)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=2.2e-05 Score=88.64 Aligned_cols=88 Identities=13% Similarity=0.045 Sum_probs=73.2
Q ss_pred CEEEEEcCChhHHHH-HHHH-HhCCCE-EEEEcCCch---hHHHHhhcCcEEcCH-----HHHhc----cCCEEEecCCC
Q psy15208 811 KIAVIIGYGDVGKGS-AQAM-RALSAQ-VWIIEIDPI---CALQAAMEGFLVVTM-----EYAKK----YGDIFVTCTGN 875 (1027)
Q Consensus 811 k~VvViG~G~IG~~v-A~~a-~~~Ga~-ViV~d~dp~---r~~~A~~~G~~v~~~-----~e~l~----~aDvvi~atG~ 875 (1027)
++|+|+|.|.||..+ ++.+ +.+|++ |++++.++. +...+...|++.++. .+ +. ..|+||+++|.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~-i~~~~gg~Dvvid~~g~ 252 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVED-VPDVYEQMDFIYEATGF 252 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGG-HHHHSCCEEEEEECSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHH-HHHhCCCCCEEEECCCC
Confidence 999999999999999 9999 999997 999999888 888888899874321 11 21 47999999998
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
...+. ..++.|+++|+++.+|...
T Consensus 253 ~~~~~-~~~~~l~~~G~iv~~g~~~ 276 (357)
T 2b5w_A 253 PKHAI-QSVQALAPNGVGALLGVPS 276 (357)
T ss_dssp HHHHH-HHHHHEEEEEEEEECCCCC
T ss_pred hHHHH-HHHHHHhcCCEEEEEeCCC
Confidence 75444 5589999999999999865
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.79 E-value=4.3e-05 Score=90.98 Aligned_cols=128 Identities=18% Similarity=0.054 Sum_probs=83.0
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCC----CCCCCCCC--CCCccch
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFR----GVGASSGT--YDSGNGE 89 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~Dlr----GhG~S~g~--~~~~~~~ 89 (1027)
.++..+|.|.......+.|++|++||+++..|+........++.. .+.|+.|+.+|+| |++.+... ......-
T Consensus 85 cl~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~-~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~g 163 (522)
T 1ukc_A 85 CLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQA-SDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAG 163 (522)
T ss_dssp CCEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHH-TTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHH
T ss_pred CCEEEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHh-cCCcEEEEEecccccccccccchhccccCCCChh
Confidence 467778888642222457999999998776665432111122221 2569999999999 44443311 0122346
Q ss_pred HHHHHHHHHHHHHh---CCC--CcEEEEEechhHHHHHHHHHhcCC--cCCccEEEEEccCC
Q psy15208 90 TDDMEILLRYIQKK---YPY--LPIILAGFSFGTFVQAKLQKRLDK--EISIKILILISVAV 144 (1027)
Q Consensus 90 ~~Dv~avl~~L~~~---~~~--~pviLVGhSmGG~vAl~~A~~~p~--~~~V~gLVli~p~~ 144 (1027)
+.|...+++|++.. ++. .+|.|+|+|.||..+...+..... ...++++|+.++..
T Consensus 164 l~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 164 LLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 225 (522)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCc
Confidence 88999999999874 232 369999999999877666554311 23688999888753
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=3.1e-05 Score=81.39 Aligned_cols=88 Identities=15% Similarity=0.112 Sum_probs=69.9
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHHH--HhcC
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDH--MRDM 887 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~--~~~m 887 (1027)
.++|+|+|+|.+|+.+|+.+...|.+|+++++++.+.......|+.+.+.++++.++|+||.|+.... +. +. +..+
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~DvVi~av~~~~-~~-~v~~l~~~ 105 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFREH-YS-SLCSLSDQ 105 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEEEHHHHTTSCSEEEECSCGGG-SG-GGGGGHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCceecHHHHHhCCCEEEECCChHH-HH-HHHHHHHh
Confidence 46899999999999999999999999999999987766665568877788888999999999987543 11 11 2223
Q ss_pred CCCeEEEEecCC
Q psy15208 888 KDQAIVCNIGHF 899 (1027)
Q Consensus 888 k~gailvNvG~~ 899 (1027)
.++.++++++..
T Consensus 106 ~~~~~vv~~s~g 117 (215)
T 2vns_A 106 LAGKILVDVSNP 117 (215)
T ss_dssp HTTCEEEECCCC
T ss_pred cCCCEEEEeCCC
Confidence 378999998876
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.79 E-value=5e-05 Score=84.64 Aligned_cols=89 Identities=12% Similarity=0.155 Sum_probs=71.9
Q ss_pred CEEEEEcCChhHHHHHHHHHhCC-CEEEEEcCCc-------hhHHHHhhcCcEEc-CHHHHhccCCEEEecCCCcccCc-
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALS-AQVWIIEIDP-------ICALQAAMEGFLVV-TMEYAKKYGDIFVTCTGNYHVIT- 880 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~G-a~ViV~d~dp-------~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG~~~vi~- 880 (1027)
++|+|||+|.+|..+|+.+...| .+|+++|+++ .....+...|. .. ++.+++.++|+||.|++......
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~~~s~~e~~~~aDvVi~avp~~~~~~~ 103 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-EPLDDVAGIACADVVLSLVVGAATKAV 103 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-EEESSGGGGGGCSEEEECCCGGGHHHH
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-CCCCHHHHHhcCCEEEEecCCHHHHHH
Confidence 68999999999999999999999 8999999987 33444555677 66 78899999999999987654222
Q ss_pred -HHHHhcCCCCeEEEEecCCC
Q psy15208 881 -HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 881 -~~~~~~mk~gailvNvG~~d 900 (1027)
.+..+.++++.++++++...
T Consensus 104 ~~~i~~~l~~~~ivv~~st~~ 124 (317)
T 4ezb_A 104 AASAAPHLSDEAVFIDLNSVG 124 (317)
T ss_dssp HHHHGGGCCTTCEEEECCSCC
T ss_pred HHHHHhhcCCCCEEEECCCCC
Confidence 23356789999999998653
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.76 E-value=7.2e-05 Score=82.44 Aligned_cols=98 Identities=19% Similarity=0.281 Sum_probs=65.5
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
..+.++++||++ ++.. .|..+++.|. +.|+.+|+|+ . ....+...+++++ .+.+....+..|++|
T Consensus 45 ~~~~l~~~hg~~---g~~~--~~~~~~~~l~---~~v~~~~~~~--~--~~~~~~~~~a~~~---~~~i~~~~~~~~~~l 109 (316)
T 2px6_A 45 SERPLFLVHPIE---GSTT--VFHSLASRLS---IPTYGLQCTR--A--APLDSIHSLAAYY---IDCIRQVQPEGPYRV 109 (316)
T ss_dssp SSCCEEEECCTT---CCSG--GGHHHHHHCS---SCEEEECCCT--T--SCTTCHHHHHHHH---HHHHTTTCSSCCCEE
T ss_pred CCCeEEEECCCC---CCHH--HHHHHHHhcC---CCEEEEECCC--C--CCcCCHHHHHHHH---HHHHHHhCCCCCEEE
Confidence 456789999974 3332 4778888773 9999999993 1 1222333344443 333433333458999
Q ss_pred EEechhHHHHHHHHHhcCCc-CC---ccEEEEEccCC
Q psy15208 112 AGFSFGTFVQAKLQKRLDKE-IS---IKILILISVAV 144 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~-~~---V~gLVli~p~~ 144 (1027)
+||||||.+|+.+|.+.++. .. +++++++++.+
T Consensus 110 ~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 110 AGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp EEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred EEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCCc
Confidence 99999999999999886521 13 78999988754
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=97.74 E-value=3.9e-05 Score=78.89 Aligned_cols=101 Identities=11% Similarity=0.090 Sum_probs=74.9
Q ss_pred HHHHhhhcCccccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh------
Q psy15208 797 IDGIKRATDVMIAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK------ 863 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l------ 863 (1027)
|.++.+..+ ...|++|+|+| .|.||+.+++.++..|++|++++.++.+...+...|.+ +.+ ..+.+
T Consensus 27 ~~~l~~~~~-~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~ 105 (198)
T 1pqw_A 27 WHSLCEVGR-LSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDG 105 (198)
T ss_dssp HHHHHTTSC-CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTT
T ss_pred HHHHHHHhC-CCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCC
Confidence 344433333 35799999999 69999999999999999999999998777667666754 222 11221
Q ss_pred ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 864 ~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
...|++|+++|... ....++.|+++|+++++|...
T Consensus 106 ~~~D~vi~~~g~~~--~~~~~~~l~~~G~~v~~g~~~ 140 (198)
T 1pqw_A 106 YGVDVVLNSLAGEA--IQRGVQILAPGGRFIELGKKD 140 (198)
T ss_dssp CCEEEEEECCCTHH--HHHHHHTEEEEEEEEECSCGG
T ss_pred CCCeEEEECCchHH--HHHHHHHhccCCEEEEEcCCC
Confidence 13799999998542 345689999999999999853
|
| >1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.74 E-value=4.1e-05 Score=84.52 Aligned_cols=89 Identities=19% Similarity=0.183 Sum_probs=68.6
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc-------CcEEc-CHHHHhccCCEEEecCCCcccC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME-------GFLVV-TMEYAKKYGDIFVTCTGNYHVI 879 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~-------G~~v~-~~~e~l~~aDvvi~atG~~~vi 879 (1027)
-.-|+|+|+|.|.+|.++|+.++ .|.+|+++|+++..+..+... ++.+. ++++ +++||+||+|.....-+
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~v 87 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNT 87 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHH
Confidence 36799999999999999999999 999999999999877766655 56543 4554 88999999998765433
Q ss_pred cHHH---HhcCCCCeEEE-EecCC
Q psy15208 880 THDH---MRDMKDQAIVC-NIGHF 899 (1027)
Q Consensus 880 ~~~~---~~~mk~gailv-NvG~~ 899 (1027)
.... ++.+ ++++++ |++..
T Consensus 88 k~~l~~~l~~~-~~~IlasntSti 110 (293)
T 1zej_A 88 KVEVLREVERL-TNAPLCSNTSVI 110 (293)
T ss_dssp HHHHHHHHHTT-CCSCEEECCSSS
T ss_pred HHHHHHHHhcC-CCCEEEEECCCc
Confidence 3333 5667 899985 77664
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00073 Score=74.71 Aligned_cols=157 Identities=16% Similarity=0.091 Sum_probs=90.9
Q ss_pred EEEEecC--CceEEEEEEecCCcc-----ccCCccEEEEECCCCCCCCCCChHHHHH---HHHHHHhCCcEEEEEcCCCC
Q psy15208 7 FFNINGS--VGILHCAINFPSSIK-----LLKLKGVVLIAHPHPLFGGTMDNKVVQT---LVRVMLSLGYISIRMNFRGV 76 (1027)
Q Consensus 7 ~i~I~t~--dG~I~~~l~~P~~~~-----~~~~~pvVVllHG~~~~gGs~~~~~~~~---la~~La~~Gy~Vla~DlrGh 76 (1027)
++++.++ +..+.+.+|.|++.. +.++.|+|.++||+ +++.++ |.. +.+.+.+.+..++.+|-.-.
T Consensus 16 ~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~---~~~~~~--w~~~~~~~~~~~~~~~~~v~p~~~p~ 90 (299)
T 4fol_A 16 KLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGL---TCTPDN--ASEKAFWQFQADKYGFAIVFPDTSPR 90 (299)
T ss_dssp EEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCT---TCCHHH--HHHHSCHHHHHHHHTCEEEEECSSCC
T ss_pred EEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCC---CCChHH--HHHhchHhHHHHHcCchhhccCCCcc
Confidence 3445442 236778888887532 12457999999997 333332 322 34445556889999985211
Q ss_pred C--------------CCCCCCCCc--------cchHHH-HHHHHHHHHHhCCC---------CcEEEEEechhHHHHHHH
Q psy15208 77 G--------------ASSGTYDSG--------NGETDD-MEILLRYIQKKYPY---------LPIILAGFSFGTFVQAKL 124 (1027)
Q Consensus 77 G--------------~S~g~~~~~--------~~~~~D-v~avl~~L~~~~~~---------~pviLVGhSmGG~vAl~~ 124 (1027)
+ ...+.+.+. ..+... +.++..++...++. .+..+.||||||.-|+.+
T Consensus 91 ~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~ 170 (299)
T 4fol_A 91 GDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICG 170 (299)
T ss_dssp STTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHH
T ss_pred eeecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHH
Confidence 1 111111110 011111 23455555555532 247999999999999999
Q ss_pred HHhcCCcCCccEEEEEccCCCcC---------------------------C---CCCC-CCcEEEEEeCCCCCCC
Q psy15208 125 QKRLDKEISIKILILISVAVKKW---------------------------L---IPEV-PKNTIIIHGELDEIIP 168 (1027)
Q Consensus 125 A~~~p~~~~V~gLVli~p~~~~~---------------------------~---l~~i-~~PvLiIhG~~D~iVP 168 (1027)
+.++|+.....++...+|...+. + .... ..|+++-+|++|.+.+
T Consensus 171 al~~~~~~~~~~~~s~s~~~~p~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~i~id~G~~D~f~~ 245 (299)
T 4fol_A 171 YLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLE 245 (299)
T ss_dssp HHHTGGGTCCSEEEEESCCCCGGGSHHHHHHHHHHTC-----CGGGCHHHHGGGSCCCTTCCEEEEEETTCTTHH
T ss_pred HHhCCCCCceEEEEecccccCcccccccccccccccccchhhhhhcCHHHHHHhcccCCCCceEEEecCCCcchh
Confidence 99975433677888877653311 0 1222 3568888999998754
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=8e-05 Score=82.51 Aligned_cols=91 Identities=11% Similarity=0.102 Sum_probs=76.0
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCCCcccCcHH------H
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTGNYHVITHD------H 883 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG~~~vi~~~------~ 883 (1027)
|+|++||.|..|..+|++|...|-+|+|+|+++.+.......|..+. ++.+++..+|+||++..+...+..- .
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 68999999999999999999999999999999988888888898754 6889999999999998776433322 2
Q ss_pred HhcCCCCeEEEEecCCCc
Q psy15208 884 MRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d~ 901 (1027)
++.+++|.++|+.+..+-
T Consensus 84 ~~~~~~g~iiId~sT~~p 101 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAP 101 (300)
T ss_dssp TTSCCC-CEEEECSCCCH
T ss_pred hhcCCCCCEEEECCCCCH
Confidence 456899999999988643
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.72 E-value=6.9e-05 Score=82.07 Aligned_cols=90 Identities=13% Similarity=0.168 Sum_probs=72.5
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCCCcccCc------HHH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTGNYHVIT------HDH 883 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG~~~vi~------~~~ 883 (1027)
.+|+|+|+|.+|..+|..+...|.+|+++|+++.+.......|+.. .+.++++..+|+|+.|+++...+. .+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 3799999999999999999999999999999998777666668775 467888889999999998543222 122
Q ss_pred HhcCCCCeEEEEecCCC
Q psy15208 884 MRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d 900 (1027)
.+.++++.++++++...
T Consensus 86 ~~~l~~~~~vv~~s~~~ 102 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIA 102 (299)
T ss_dssp HHHCCTTCEEEECSCCC
T ss_pred hhcCCCCCEEEECCCCC
Confidence 35689999999997653
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00018 Score=78.51 Aligned_cols=105 Identities=14% Similarity=0.145 Sum_probs=76.0
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHH-HhhcC---cEEcCHHHHh-ccCC
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQ-AAMEG---FLVVTMEYAK-KYGD 867 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~-A~~~G---~~v~~~~e~l-~~aD 867 (1027)
.++..++.+..+..+.||+++|+|+|.+|+.++..|+..|+ +|+++++++.++.+ +...+ +.+.+.++.. .++|
T Consensus 104 ~G~~~~lL~~~~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~D 183 (272)
T 3pwz_A 104 IGLLRDIEENLGEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFD 183 (272)
T ss_dssp HHHHHHHHTTSCCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCS
T ss_pred HHHHHHHHHHcCCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCC
Confidence 56777622444667899999999999999999999999997 99999999877654 22322 4555555543 6899
Q ss_pred EEEecCCCc-----ccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 868 IFVTCTGNY-----HVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 868 vvi~atG~~-----~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
+||+||+.. ..+. .+.++++++++.+-..+.
T Consensus 184 ivInaTp~gm~~~~~~i~---~~~l~~~~~V~DlvY~P~ 219 (272)
T 3pwz_A 184 IVVNATSASLTADLPPLP---ADVLGEAALAYELAYGKG 219 (272)
T ss_dssp EEEECSSGGGGTCCCCCC---GGGGTTCSEEEESSCSCC
T ss_pred EEEECCCCCCCCCCCCCC---HHHhCcCCEEEEeecCCC
Confidence 999998642 1233 245678888887766543
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.70 E-value=9.6e-05 Score=83.97 Aligned_cols=93 Identities=20% Similarity=0.098 Sum_probs=72.6
Q ss_pred cccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh---ccCCEEEecCCCc
Q psy15208 807 MIAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK---KYGDIFVTCTGNY 876 (1027)
Q Consensus 807 ~l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l---~~aDvvi~atG~~ 876 (1027)
...|++|+|+| .|.||+.+++.++.+|++|++++ ++.+...+...|++ +.+ ..+.+ ...|++++++|..
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~ 259 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGS 259 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTT
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCCh
Confidence 35799999999 79999999999999999999988 66777778888875 332 22222 2589999999987
Q ss_pred ccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
...-...++.++++|.++.+|...
T Consensus 260 ~~~~~~~~~~l~~~G~iv~~g~~~ 283 (375)
T 2vn8_A 260 TETWAPDFLKKWSGATYVTLVTPF 283 (375)
T ss_dssp HHHHGGGGBCSSSCCEEEESCCSH
T ss_pred hhhhHHHHHhhcCCcEEEEeCCCc
Confidence 221234588899999999999763
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=7.5e-05 Score=81.44 Aligned_cols=104 Identities=13% Similarity=0.113 Sum_probs=71.8
Q ss_pred hhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh-hc----CcEEcCHHHHhc-cC
Q psy15208 793 RESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA-ME----GFLVVTMEYAKK-YG 866 (1027)
Q Consensus 793 ~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-~~----G~~v~~~~e~l~-~a 866 (1027)
+.++...+.+ .+..+.|++|+|+|.|.+|+.+|..|...|++|+++++++.++.... .. .+...++++... ++
T Consensus 103 ~~G~~~~L~~-~~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 1p77_A 103 GIGLVTDLQR-LNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTY 181 (272)
T ss_dssp HHHHHHHHHH-TTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCC
T ss_pred HHHHHHHHHH-hCCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCC
Confidence 4667777665 35568999999999999999999999999999999999987654422 21 233444444334 89
Q ss_pred CEEEecCCCccc-----CcHHHHhcCCCCeEEEEecCCC
Q psy15208 867 DIFVTCTGNYHV-----ITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 867 Dvvi~atG~~~v-----i~~~~~~~mk~gailvNvG~~d 900 (1027)
|+||++|+.... +..+ .++++.+++++...+
T Consensus 182 DivIn~t~~~~~~~~~~i~~~---~l~~~~~v~D~~y~p 217 (272)
T 1p77_A 182 DLVINATSAGLSGGTASVDAE---ILKLGSAFYDMQYAK 217 (272)
T ss_dssp SEEEECCCC-------CCCHH---HHHHCSCEEESCCCT
T ss_pred CEEEECCCCCCCCCCCCCCHH---HcCCCCEEEEeeCCC
Confidence 999999975432 2222 235566777776543
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=4.4e-05 Score=83.05 Aligned_cols=89 Identities=11% Similarity=0.006 Sum_probs=69.5
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCc---HHHHhcC
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVIT---HDHMRDM 887 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~---~~~~~~m 887 (1027)
++|+|+|+|.+|..+|..+.. |.+|+++|+++.+.......|..+.+.++++..+|+||.|++....+. .+..+.+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~l 80 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL 80 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHHHHHHhhC
Confidence 369999999999999999999 999999999987766655556654446677889999999998663122 2223568
Q ss_pred CCCeEEEEecCCC
Q psy15208 888 KDQAIVCNIGHFD 900 (1027)
Q Consensus 888 k~gailvNvG~~d 900 (1027)
+++.++++++...
T Consensus 81 ~~~~~vv~~s~~~ 93 (289)
T 2cvz_A 81 REGTYWVDATSGE 93 (289)
T ss_dssp CTTEEEEECSCCC
T ss_pred CCCCEEEECCCCC
Confidence 8999999987653
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.001 Score=76.26 Aligned_cols=114 Identities=13% Similarity=0.020 Sum_probs=77.4
Q ss_pred EEEEecCCc--eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcC-----------
Q psy15208 7 FFNINGSVG--ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNF----------- 73 (1027)
Q Consensus 7 ~i~I~t~dG--~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~Dl----------- 73 (1027)
.+.+...+. .+.+.++.|.+ .++.|++|.+||.. . ...+||.++.++.
T Consensus 113 ~I~v~~~g~s~sf~~~i~lP~g---~~P~Pvii~~~~~~-----~-----------~~~~G~A~i~f~~~~va~d~~~gs 173 (433)
T 4g4g_A 113 TVRVTVGSKSISFSASIRKPSG---AGPFPAIIGIGGAS-----I-----------PIPSNVATITFNNDEFGAQMGSGS 173 (433)
T ss_dssp EEEEEETTEEEEEEEEEECCSS---SCCEEEEEEESCCC-----S-----------CCCTTSEEEEECHHHHSCCSSGGG
T ss_pred EEEEEcCCeeEEEEEEEECCCC---CCCccEEEEECCCc-----c-----------ccCCCeEEEEeCCcccccccCCCc
Confidence 344443332 46888999976 36788888898731 1 1356999999987
Q ss_pred CCCCCCC------CCCCCccchHHHHHHHHHHHHH----hCCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEc
Q psy15208 74 RGVGASS------GTYDSGNGETDDMEILLRYIQK----KYPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILIS 141 (1027)
Q Consensus 74 rGhG~S~------g~~~~~~~~~~Dv~avl~~L~~----~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~ 141 (1027)
+|+|.-. ........++-++..++++|.. +... .++.++|||+||..++.+++..+ +++++|..+
T Consensus 174 rG~g~f~~ly~~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D~---Ri~~vi~~~ 250 (433)
T 4g4g_A 174 RGQGKFYDLFGRDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALVD---RIALTIPQE 250 (433)
T ss_dssp TTCSHHHHHHCTTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHCT---TCSEEEEES
T ss_pred CCccccccccCCccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcCC---ceEEEEEec
Confidence 2222100 0011112345688889999987 4332 46999999999999999999875 599999886
Q ss_pred c
Q psy15208 142 V 142 (1027)
Q Consensus 142 p 142 (1027)
+
T Consensus 251 s 251 (433)
T 4g4g_A 251 S 251 (433)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=97.69 E-value=3.7e-05 Score=85.01 Aligned_cols=90 Identities=12% Similarity=0.158 Sum_probs=71.0
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCCCcc----cCcHHHHh
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTGNYH----VITHDHMR 885 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG~~~----vi~~~~~~ 885 (1027)
++|++||.|..|..+|+.|...|-+|+|+|+++.+.......|..+. ++.+++..+|+||++..+.. ++..+.+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 68999999999999999999999999999999988777777888754 68889999999999987653 44455678
Q ss_pred cCCCCeEEEEecCCC
Q psy15208 886 DMKDQAIVCNIGHFD 900 (1027)
Q Consensus 886 ~mk~gailvNvG~~d 900 (1027)
.++++.++|+.+..+
T Consensus 86 ~~~~~~iiid~sT~~ 100 (297)
T 4gbj_A 86 KLGKDGVHVSMSTIS 100 (297)
T ss_dssp HHCTTCEEEECSCCC
T ss_pred hcCCCeEEEECCCCC
Confidence 899999999998764
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=7.2e-05 Score=83.41 Aligned_cols=101 Identities=18% Similarity=0.134 Sum_probs=77.1
Q ss_pred HHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC------HHHHhc----
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT------MEYAKK---- 864 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~------~~e~l~---- 864 (1027)
|.++.+..+ ...|++|+|+|+ |.||+.+++.++..|++|++++.++.+...+...|.+ +.+ ..+.+.
T Consensus 134 ~~al~~~~~-~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~ 212 (333)
T 1v3u_A 134 YFGLLEVCG-VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASP 212 (333)
T ss_dssp HHHHHTTSC-CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCT
T ss_pred HHHHHHhhC-CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhC
Confidence 444434333 358999999998 9999999999999999999999998887777777764 222 222222
Q ss_pred -cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 865 -YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 865 -~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
..|++|+++|... ....++.|+++|.++.+|...
T Consensus 213 ~~~d~vi~~~g~~~--~~~~~~~l~~~G~~v~~g~~~ 247 (333)
T 1v3u_A 213 DGYDCYFDNVGGEF--LNTVLSQMKDFGKIAICGAIS 247 (333)
T ss_dssp TCEEEEEESSCHHH--HHHHHTTEEEEEEEEECCCCC
T ss_pred CCCeEEEECCChHH--HHHHHHHHhcCCEEEEEeccc
Confidence 3799999999753 345689999999999999753
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.69 E-value=9.5e-05 Score=81.16 Aligned_cols=103 Identities=16% Similarity=0.204 Sum_probs=75.3
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHH-HhhcC----cEEcCHHHHhccCC
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQ-AAMEG----FLVVTMEYAKKYGD 867 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~-A~~~G----~~v~~~~e~l~~aD 867 (1027)
.++...+.+ .+..+.||+|+|+|+|.+|+.++..|+..|+ +|+++++++.++.+ +...+ +.+.+.+++..++|
T Consensus 111 ~G~~~~L~~-~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aD 189 (281)
T 3o8q_A 111 EGLVQDLLA-QQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYD 189 (281)
T ss_dssp HHHHHHHHH-TTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEE
T ss_pred HHHHHHHHH-hCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCC
Confidence 566776644 3667899999999999999999999999997 99999999877654 22222 45556666667899
Q ss_pred EEEecCCCc-----ccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 868 IFVTCTGNY-----HVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 868 vvi~atG~~-----~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
+||+||+.. ..+. .+.++++++++.+...+
T Consensus 190 iIInaTp~gm~~~~~~l~---~~~l~~~~~V~DlvY~P 224 (281)
T 3o8q_A 190 VIINSTSASLDGELPAID---PVIFSSRSVCYDMMYGK 224 (281)
T ss_dssp EEEECSCCCC----CSCC---GGGEEEEEEEEESCCCS
T ss_pred EEEEcCcCCCCCCCCCCC---HHHhCcCCEEEEecCCC
Confidence 999999643 1122 23467777777775543
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=7.1e-05 Score=81.61 Aligned_cols=101 Identities=13% Similarity=0.072 Sum_probs=74.7
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecC
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCT 873 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~at 873 (1027)
.++...+.+. + ||+|+|+|+|.+|++++..|+..|++|+|+++++.++.+....|+...+.+++ .++|+||+||
T Consensus 107 ~Gf~~~L~~~-~----~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~~~~~l-~~~DiVInaT 180 (269)
T 3phh_A 107 LGFYLSLKQK-N----YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPK-SAFDLIINAT 180 (269)
T ss_dssp HHHHHHCC--------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEESSCCS-SCCSEEEECC
T ss_pred HHHHHHHHHc-C----CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEecHHHh-ccCCEEEEcc
Confidence 4556555432 2 99999999999999999999999999999999998876533667776666554 4899999998
Q ss_pred CCc----ccCcHHHHh-cCCCCeEEEEecCCC
Q psy15208 874 GNY----HVITHDHMR-DMKDQAIVCNIGHFD 900 (1027)
Q Consensus 874 G~~----~vi~~~~~~-~mk~gailvNvG~~d 900 (1027)
+.. ..+..+.+. .++++++++++-..+
T Consensus 181 p~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P 212 (269)
T 3phh_A 181 SASLHNELPLNKEVLKGYFKEGKLAYDLAYGF 212 (269)
T ss_dssp TTCCCCSCSSCHHHHHHHHHHCSEEEESCCSS
T ss_pred cCCCCCCCCCChHHHHhhCCCCCEEEEeCCCC
Confidence 642 135544332 577888888887654
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.68 E-value=8.8e-05 Score=82.43 Aligned_cols=91 Identities=11% Similarity=0.119 Sum_probs=73.3
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCC--chhHHHHhhcCcEEc-CHHHHhccCCEEEecCCCcccCc--HHH
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEID--PICALQAAMEGFLVV-TMEYAKKYGDIFVTCTGNYHVIT--HDH 883 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~d--p~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG~~~vi~--~~~ 883 (1027)
-.+|+|||+|.+|..+|+.+...|. +|+++|++ +.+...+...|..+. ++.+++..+|+||.|+....... .+.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~~~~l 103 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAALEVAQQA 103 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHHHHHhh
Confidence 4689999999999999999999999 99999997 455666667788754 68888999999999987654221 233
Q ss_pred HhcCCCCeEEEEecCCC
Q psy15208 884 MRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d 900 (1027)
.+.++++.++++++...
T Consensus 104 ~~~l~~~~ivvd~st~~ 120 (312)
T 3qsg_A 104 GPHLCEGALYADFTSCS 120 (312)
T ss_dssp GGGCCTTCEEEECCCCC
T ss_pred HhhcCCCCEEEEcCCCC
Confidence 56789999999998764
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.67 E-value=5.3e-05 Score=76.99 Aligned_cols=70 Identities=23% Similarity=0.210 Sum_probs=57.4
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhC-CCEEEEEcCCchhHHHHhhcCcEEc--C------HHHH--hccCCEEEecCCC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRAL-SAQVWIIEIDPICALQAAMEGFLVV--T------MEYA--KKYGDIFVTCTGN 875 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~-Ga~ViV~d~dp~r~~~A~~~G~~v~--~------~~e~--l~~aDvvi~atG~ 875 (1027)
.+.+++|+|+|+|.+|+.+|+.|+.. |.+|+++|.++.+...+...|+.+. + +.++ +..+|+||.++++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 45688999999999999999999999 9999999999988877777787643 2 2333 5678999998876
Q ss_pred c
Q psy15208 876 Y 876 (1027)
Q Consensus 876 ~ 876 (1027)
.
T Consensus 116 ~ 116 (183)
T 3c85_A 116 H 116 (183)
T ss_dssp H
T ss_pred h
Confidence 5
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.67 E-value=9.2e-05 Score=81.97 Aligned_cols=90 Identities=14% Similarity=0.131 Sum_probs=72.1
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCCCcccCcHHH------
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTGNYHVITHDH------ 883 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG~~~vi~~~~------ 883 (1027)
.+|+|+|+|.+|..+|..+...|.+|+++|+++.+.......|..+. +.++++..+|+||.|+.+...+..-.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~ 110 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGV 110 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhH
Confidence 67999999999999999999999999999999987776666787754 67788889999999998543222211
Q ss_pred HhcCCCCeEEEEecCCC
Q psy15208 884 MRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d 900 (1027)
++.++++.++++++...
T Consensus 111 ~~~l~~~~~vv~~s~~~ 127 (316)
T 2uyy_A 111 LQGIRPGKCYVDMSTVD 127 (316)
T ss_dssp GGGCCTTCEEEECSCCC
T ss_pred hhcCCCCCEEEECCCCC
Confidence 24588999999987653
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=3.9e-05 Score=84.05 Aligned_cols=104 Identities=16% Similarity=0.153 Sum_probs=75.7
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcEEcC---HHHHhccCCEE
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFLVVT---MEYAKKYGDIF 869 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~v~~---~~e~l~~aDvv 869 (1027)
.++...+.+. +..+.||+|+|+|+|.+|+.++..|+..|+ +|+++++++.++.... ..+...+ +.+++.++|+|
T Consensus 102 ~G~~~~L~~~-~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la-~~~~~~~~~~~~~~~~~aDiV 179 (277)
T 3don_A 102 IGYVNGLKQI-YEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWS-LNINKINLSHAESHLDEFDII 179 (277)
T ss_dssp HHHHHHHHHH-STTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC-SCCEEECHHHHHHTGGGCSEE
T ss_pred HHHHHHHHHh-CCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH-HhcccccHhhHHHHhcCCCEE
Confidence 5666666543 556899999999999999999999999999 8999999987755332 2334333 44556789999
Q ss_pred EecCCCc---c---cCcHHHHhcCCCCeEEEEecCCCcc
Q psy15208 870 VTCTGNY---H---VITHDHMRDMKDQAIVCNIGHFDNE 902 (1027)
Q Consensus 870 i~atG~~---~---vi~~~~~~~mk~gailvNvG~~d~e 902 (1027)
|+||+.. . .+. .+.++++++++++...+.+
T Consensus 180 InaTp~Gm~~~~~~~l~---~~~l~~~~~V~D~vY~P~~ 215 (277)
T 3don_A 180 INTTPAGMNGNTDSVIS---LNRLASHTLVSDIVYNPYK 215 (277)
T ss_dssp EECCC-------CCSSC---CTTCCSSCEEEESCCSSSS
T ss_pred EECccCCCCCCCcCCCC---HHHcCCCCEEEEecCCCCC
Confidence 9998642 1 122 4568889999888765443
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.66 E-value=8.4e-05 Score=72.50 Aligned_cols=85 Identities=18% Similarity=0.151 Sum_probs=62.5
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcC--------HHHH-hccCCEEEecCCCcc--c
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT--------MEYA-KKYGDIFVTCTGNYH--V 878 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~--------~~e~-l~~aDvvi~atG~~~--v 878 (1027)
.++|+|+|+|.+|+.+|+.|+..|.+|+++|.|+.+...+...|+.+.. +.++ +.++|+||.++++.. .
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~ 86 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG 86 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHH
Confidence 4689999999999999999999999999999999888888778887431 1221 457999999988653 1
Q ss_pred CcHHHHhcCCCCeEEE
Q psy15208 879 ITHDHMRDMKDQAIVC 894 (1027)
Q Consensus 879 i~~~~~~~mk~gailv 894 (1027)
.-...++.+.++..++
T Consensus 87 ~~~~~a~~~~~~~~ii 102 (140)
T 3fwz_A 87 EIVASARAKNPDIEII 102 (140)
T ss_dssp HHHHHHHHHCSSSEEE
T ss_pred HHHHHHHHHCCCCeEE
Confidence 1112344455555544
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.66 E-value=4.2e-05 Score=86.23 Aligned_cols=91 Identities=18% Similarity=0.182 Sum_probs=73.1
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhcc----CCEEEecCCCcccCcH--H
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKY----GDIFVTCTGNYHVITH--D 882 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~----aDvvi~atG~~~vi~~--~ 882 (1027)
-++|+|||+|.+|..+|+.++..|.+|+++|+++.+...+...|+.. .++++++.+ +|+||.|+.... +.. +
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~~-~~~vl~ 86 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTA-IDSLLD 86 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCHHH-HHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCHHH-HHHHHH
Confidence 46799999999999999999999999999999998888888888864 467776654 799999997542 211 2
Q ss_pred HHhcCCCCeEEEEecCCCc
Q psy15208 883 HMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~d~ 901 (1027)
.+..++++++++++|....
T Consensus 87 ~l~~~~~~~iv~Dv~Svk~ 105 (341)
T 3ktd_A 87 AVHTHAPNNGFTDVVSVKT 105 (341)
T ss_dssp HHHHHCTTCCEEECCSCSH
T ss_pred HHHccCCCCEEEEcCCCCh
Confidence 3445689999999998754
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=5.9e-05 Score=83.72 Aligned_cols=88 Identities=16% Similarity=0.136 Sum_probs=72.6
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHH--h-----ccCCEEEecCCCcccCc
Q psy15208 810 GKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYA--K-----KYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 810 Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~--l-----~~aDvvi~atG~~~vi~ 880 (1027)
|+ |+|.|. |.||+.+++.++.+|++|++++.++.+...+...|++ +.+..+. + ...|++++++|.. .-
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~~--~~ 224 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDK--VL 224 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSCHH--HH
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCCcH--HH
Confidence 56 999998 9999999999999999999999999999889999986 3333221 1 1469999999976 33
Q ss_pred HHHHhcCCCCeEEEEecCCC
Q psy15208 881 HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d 900 (1027)
...++.|+++|+++.+|...
T Consensus 225 ~~~~~~l~~~G~iv~~G~~~ 244 (324)
T 3nx4_A 225 AKVLAQMNYGGCVAACGLAG 244 (324)
T ss_dssp HHHHHTEEEEEEEEECCCTT
T ss_pred HHHHHHHhcCCEEEEEecCC
Confidence 45689999999999999864
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=5.7e-05 Score=85.52 Aligned_cols=100 Identities=13% Similarity=0.065 Sum_probs=77.6
Q ss_pred HHHHhhhcCccccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc-----
Q psy15208 797 IDGIKRATDVMIAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK----- 864 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~----- 864 (1027)
|.++.+..+ ...|++|+|+| .|.||+.+++.++.+|++|++++.++.+...+...|++ +.+ ..+.+.
T Consensus 152 ~~al~~~~~-~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~ 230 (362)
T 2c0c_A 152 YISLKELGG-LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPE 230 (362)
T ss_dssp HHHHHHHTC-CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTT
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCC
Confidence 444444333 35899999999 69999999999999999999999998888888888875 322 222222
Q ss_pred cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 865 YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 865 ~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
..|++|+++|.. .....++.|+++|.++.+|..
T Consensus 231 g~D~vid~~g~~--~~~~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 231 GVDVVYESVGGA--MFDLAVDALATKGRLIVIGFI 263 (362)
T ss_dssp CEEEEEECSCTH--HHHHHHHHEEEEEEEEECCCG
T ss_pred CCCEEEECCCHH--HHHHHHHHHhcCCEEEEEeCC
Confidence 479999999974 234568999999999999975
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00011 Score=80.38 Aligned_cols=89 Identities=15% Similarity=0.154 Sum_probs=70.3
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCCCcccCcHH------HH
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTGNYHVITHD------HM 884 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG~~~vi~~~------~~ 884 (1027)
+|+|+|+|.+|..+|..+...|.+|+++|+++.+.......|+.+ .+.++++..+|+||.|+.....+..- .+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~~ 81 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGIL 81 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSGG
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhHH
Confidence 689999999999999999999999999999998777766678875 46788888999999998654322211 12
Q ss_pred hcCCCCeEEEEecCCC
Q psy15208 885 RDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d 900 (1027)
+.++++.++++++..+
T Consensus 82 ~~l~~~~~vv~~s~~~ 97 (296)
T 2gf2_A 82 KKVKKGSLLIDSSTID 97 (296)
T ss_dssp GTCCTTCEEEECSCCC
T ss_pred hcCCCCCEEEECCCCC
Confidence 3578899999976553
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00012 Score=88.53 Aligned_cols=112 Identities=13% Similarity=0.062 Sum_probs=75.9
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCC----CCCCCCC-------CCCCccchHHHHHHHHH
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFR----GVGASSG-------TYDSGNGETDDMEILLR 98 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~Dlr----GhG~S~g-------~~~~~~~~~~Dv~avl~ 98 (1027)
.+.|++|++||+++..|+.....+ ....|++ .|+.|+.+++| |+..... .......-+.|...+++
T Consensus 139 ~~~PV~v~iHGGg~~~g~~~~~~~--~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~ 216 (585)
T 1dx4_A 139 NGLPILIWIYGGGFMTGSATLDIY--NADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIR 216 (585)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGG--CCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcccCCCCCCCCC--CchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHH
Confidence 457999999998876666543222 2344544 58999999999 3332210 00112235889999999
Q ss_pred HHHHh---CCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 99 YIQKK---YPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 99 ~L~~~---~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
|+++. ++. .+|.|+|+|.||..+..++........++++|+.++..
T Consensus 217 wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 217 WLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 99874 233 36999999999998877776532233688999988754
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00013 Score=79.90 Aligned_cols=90 Identities=16% Similarity=0.186 Sum_probs=71.7
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-CHHHHhccCCEEEecCCCcc----cCc--HHH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-TMEYAKKYGDIFVTCTGNYH----VIT--HDH 883 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG~~~----vi~--~~~ 883 (1027)
.+|+|+|+|.+|..+|..+...|.+|+++|+++.+.......|+.+. +.++++..+|+|+.|++... ++. .+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 58999999999999999999999999999999877766666687754 67888889999999996543 221 122
Q ss_pred HhcCCCCeEEEEecCCC
Q psy15208 884 MRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d 900 (1027)
.+.++++.++++++...
T Consensus 85 ~~~l~~~~~vv~~~~~~ 101 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVS 101 (301)
T ss_dssp HHHSCTTCEEEECCCCC
T ss_pred hhcCCCCCEEEECCCCC
Confidence 35689999999987653
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00013 Score=87.08 Aligned_cols=129 Identities=17% Similarity=0.091 Sum_probs=82.5
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHH-HHH-hCCcEEEEEcCCCC----CCCCC--CCCCcc
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVR-VML-SLGYISIRMNFRGV----GASSG--TYDSGN 87 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~-~La-~~Gy~Vla~DlrGh----G~S~g--~~~~~~ 87 (1027)
.++..+|.|.......+.|++|++||+++..|+........++. .++ ..|+.|+.+|+|.- ..+.. ......
T Consensus 97 cl~l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n 176 (534)
T 1llf_A 97 CLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGN 176 (534)
T ss_dssp CCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTT
T ss_pred CeEEEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccCCCc
Confidence 57778888875222246799999999887666643211122332 232 35899999999942 11100 001222
Q ss_pred chHHHHHHHHHHHHHh---CCC--CcEEEEEechhHHHHHHHHHhc------CCcCCccEEEEEccCC
Q psy15208 88 GETDDMEILLRYIQKK---YPY--LPIILAGFSFGTFVQAKLQKRL------DKEISIKILILISVAV 144 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~---~~~--~pviLVGhSmGG~vAl~~A~~~------p~~~~V~gLVli~p~~ 144 (1027)
.-+.|...+++|+++. ++. .+|.|+|+|.||..+...+... .....++++|+.++..
T Consensus 177 ~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 177 AGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCc
Confidence 3588999999999874 332 3699999999998776665543 1123689999998754
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00013 Score=87.19 Aligned_cols=129 Identities=14% Similarity=0.069 Sum_probs=82.6
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHH-HHHh-CCcEEEEEcCCCCC----CCCC--CCCCcc
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVR-VMLS-LGYISIRMNFRGVG----ASSG--TYDSGN 87 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~-~La~-~Gy~Vla~DlrGhG----~S~g--~~~~~~ 87 (1027)
.++..+|.|.......+.|++|++||+++..|+........++. .++. .|+.|+.+|+|.-. .+.. ......
T Consensus 105 cl~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n 184 (544)
T 1thg_A 105 CLYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTN 184 (544)
T ss_dssp CCEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTT
T ss_pred CeEEEEEeCCCCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccCCCc
Confidence 46777788865222346799999999877666543211122333 2332 48999999999421 1100 001122
Q ss_pred chHHHHHHHHHHHHHh---CCC--CcEEEEEechhHHHHHHHHHhc------CCcCCccEEEEEccCC
Q psy15208 88 GETDDMEILLRYIQKK---YPY--LPIILAGFSFGTFVQAKLQKRL------DKEISIKILILISVAV 144 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~---~~~--~pviLVGhSmGG~vAl~~A~~~------p~~~~V~gLVli~p~~ 144 (1027)
.-+.|...+++|+++. ++. .+|.|+|+|.||.++..++... .....++++|+.++..
T Consensus 185 ~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 185 AGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred hhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 3588999999999875 232 3699999999999988777653 0122689999998754
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=97.60 E-value=8.4e-05 Score=89.58 Aligned_cols=128 Identities=17% Similarity=0.068 Sum_probs=79.5
Q ss_pred eEEEEEEecCCcc-ccCCccEEEEECCCCCCCCCCChHHH----HHHHHHHHh-CCcEEEEEcCC----CCCCCCCCCCC
Q psy15208 16 ILHCAINFPSSIK-LLKLKGVVLIAHPHPLFGGTMDNKVV----QTLVRVMLS-LGYISIRMNFR----GVGASSGTYDS 85 (1027)
Q Consensus 16 ~I~~~l~~P~~~~-~~~~~pvVVllHG~~~~gGs~~~~~~----~~la~~La~-~Gy~Vla~Dlr----GhG~S~g~~~~ 85 (1027)
.++.-+|.|.... .....|++|++||+++..|+.....+ ......|+. .|+.|+.++|| |+..+......
T Consensus 80 cl~lnv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~~~~p 159 (579)
T 2bce_A 80 CLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLP 159 (579)
T ss_dssp CCEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCC
T ss_pred CCEEEEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCCCCCC
Confidence 4666777775421 12457999999998765555432100 001234443 47999999999 44333211111
Q ss_pred ccchHHHHHHHHHHHHHh---CCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 86 GNGETDDMEILLRYIQKK---YPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 86 ~~~~~~Dv~avl~~L~~~---~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
...-+.|...+++|+++. ++. .+|.|+|+|.||..+..++........+++.|+.++.
T Consensus 160 gn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 160 GNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp CCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred CccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 122478999999999874 333 3599999999999998877653222368889988764
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00014 Score=77.78 Aligned_cols=93 Identities=19% Similarity=0.256 Sum_probs=67.0
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchh--------------HHH-HhhcC-cEEcCHHHHhccCCE
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPIC--------------ALQ-AAMEG-FLVVTMEYAKKYGDI 868 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r--------------~~~-A~~~G-~~v~~~~e~l~~aDv 868 (1027)
...+.+++|+|+|+|.+|..+|+.+...|.+|+++|+++.+ ... +...| ....+..+++.++|+
T Consensus 14 ~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDv 93 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAEL 93 (245)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSE
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCE
Confidence 44688999999999999999999999999999999999876 222 22223 456678899999999
Q ss_pred EEecCCCcccCcH-HHH--hcCCCCeEEEEecC
Q psy15208 869 FVTCTGNYHVITH-DHM--RDMKDQAIVCNIGH 898 (1027)
Q Consensus 869 vi~atG~~~vi~~-~~~--~~mk~gailvNvG~ 898 (1027)
||.|+....+... ..+ ..+ ++.++++++-
T Consensus 94 Vilavp~~~~~~~~~~i~~~~l-~g~ivi~~s~ 125 (245)
T 3dtt_A 94 VVNATEGASSIAALTAAGAENL-AGKILVDIAN 125 (245)
T ss_dssp EEECSCGGGHHHHHHHHCHHHH-TTSEEEECCC
T ss_pred EEEccCcHHHHHHHHHhhhhhc-CCCEEEECCC
Confidence 9999976542211 012 223 7899999983
|
| >2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.0002 Score=79.61 Aligned_cols=89 Identities=18% Similarity=0.098 Sum_probs=70.8
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhC-CC-EEEEEcCCchhHHHHh-hcC--cEE-cCHHHHhccCCEEEecCCCc-ccCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRAL-SA-QVWIIEIDPICALQAA-MEG--FLV-VTMEYAKKYGDIFVTCTGNY-HVIT 880 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~-Ga-~ViV~d~dp~r~~~A~-~~G--~~v-~~~~e~l~~aDvvi~atG~~-~vi~ 880 (1027)
..+++++|||+|.+|+.+++.+... |. +|.++|+++.++.... ..+ +.+ .++++++.++|+|++||... .++.
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~~~v~~ 212 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLATEPILF 212 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCSSCCBC
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCCCcccC
Confidence 4678999999999999999988764 87 8999999987766543 335 554 46888999999999998653 3444
Q ss_pred HHHHhcCCCCeEEEEecCC
Q psy15208 881 HDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~ 899 (1027)
. +.+++|..++++|..
T Consensus 213 ~---~~l~~g~~vi~~g~~ 228 (312)
T 2i99_A 213 G---EWVKPGAHINAVGAS 228 (312)
T ss_dssp G---GGSCTTCEEEECCCC
T ss_pred H---HHcCCCcEEEeCCCC
Confidence 3 578999999999876
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00015 Score=79.58 Aligned_cols=104 Identities=13% Similarity=0.032 Sum_probs=74.5
Q ss_pred hhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh-hc----------CcEEcCHHH
Q psy15208 793 RESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA-ME----------GFLVVTMEY 861 (1027)
Q Consensus 793 ~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-~~----------G~~v~~~~e 861 (1027)
..++...+.+. +..+.||+|+|+|.|.+|+.+|..|...| +|+++++++.++.+.. .. .+++.++.+
T Consensus 112 ~~G~~~~L~~~-~~~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 189 (287)
T 1nvt_A 112 GIGARMALEEE-IGRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDV 189 (287)
T ss_dssp HHHHHHHHHHH-HCCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTC
T ss_pred HHHHHHHHHHh-CCCcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHH
Confidence 35666666543 44678999999999999999999999999 9999999886654321 11 123444455
Q ss_pred HhccCCEEEecCCCccc-------CcHHHHhcCCCCeEEEEecCCC
Q psy15208 862 AKKYGDIFVTCTGNYHV-------ITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 862 ~l~~aDvvi~atG~~~v-------i~~~~~~~mk~gailvNvG~~d 900 (1027)
.+..+|++|+++|.... +. ..+.++++.+++++...+
T Consensus 190 ~~~~~DilVn~ag~~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~p 233 (287)
T 1nvt_A 190 DLDGVDIIINATPIGMYPNIDVEPIV--KAEKLREDMVVMDLIYNP 233 (287)
T ss_dssp CCTTCCEEEECSCTTCTTCCSSCCSS--CSTTCCSSSEEEECCCSS
T ss_pred hhCCCCEEEECCCCCCCCCCCCCCCC--CHHHcCCCCEEEEeeeCC
Confidence 66789999999975421 20 135688899999988643
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00011 Score=77.84 Aligned_cols=92 Identities=12% Similarity=0.121 Sum_probs=67.3
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH--HhhcCcEEcC---HHHHhccCCEEEecCCCcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ--AAMEGFLVVT---MEYAKKYGDIFVTCTGNYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~--A~~~G~~v~~---~~e~l~~aDvvi~atG~~~vi 879 (1027)
.+.+.|++|+|+|.|.+|...++.|...||+|+|++.+.....+ +...++.+.. .++.+..+|+||.||+.+. +
T Consensus 26 fl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~~-~ 104 (223)
T 3dfz_A 26 MLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQA-V 104 (223)
T ss_dssp EECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCTH-H
T ss_pred EEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCHH-H
Confidence 34689999999999999999999999999999999776533332 2223344332 2355778999999999886 5
Q ss_pred cHHHHhcCCCCeEEEEecC
Q psy15208 880 THDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~ 898 (1027)
+.......+ -+++||+.-
T Consensus 105 N~~I~~~ak-~gi~VNvvD 122 (223)
T 3dfz_A 105 NKFVKQHIK-NDQLVNMAS 122 (223)
T ss_dssp HHHHHHHSC-TTCEEEC--
T ss_pred HHHHHHHHh-CCCEEEEeC
Confidence 665445556 788888854
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.55 E-value=4.8e-05 Score=85.60 Aligned_cols=98 Identities=12% Similarity=0.094 Sum_probs=66.8
Q ss_pred HHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCC-CEEEEEcCCchhHHHHhhcCcE-EcC----HHHHh-----c
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALS-AQVWIIEIDPICALQAAMEGFL-VVT----MEYAK-----K 864 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~G-a~ViV~d~dp~r~~~A~~~G~~-v~~----~~e~l-----~ 864 (1027)
|.++.+..+ .-.|++|+|.|. |.+|..+++.++.+| ++|++++ ++.+...+. .|++ +.+ ..+.+ .
T Consensus 131 ~~~l~~~~~-~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~~~~~~~~~~~~~~~~ 207 (349)
T 4a27_A 131 YVMLFEVAN-LREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFDRNADYVQEVKRISAE 207 (349)
T ss_dssp HHHHHTTSC-CCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEETTSCHHHHHHHHCTT
T ss_pred HHHHHHhcC-CCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEcCCccHHHHHHHhcCC
Confidence 344434333 358999999999 999999999999986 5888887 455665565 7775 322 22222 2
Q ss_pred cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 865 YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 865 ~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
..|++++|+|...+ ...++.|+++|+++.+|..
T Consensus 208 g~Dvv~d~~g~~~~--~~~~~~l~~~G~~v~~G~~ 240 (349)
T 4a27_A 208 GVDIVLDCLCGDNT--GKGLSLLKPLGTYILYGSS 240 (349)
T ss_dssp CEEEEEEECC---------CTTEEEEEEEEEEC--
T ss_pred CceEEEECCCchhH--HHHHHHhhcCCEEEEECCC
Confidence 47999999998763 5678999999999999975
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00021 Score=77.46 Aligned_cols=87 Identities=14% Similarity=0.184 Sum_probs=69.4
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE---EcCHHHHhccCCEEEecCCCc---ccCcHHHHh
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL---VVTMEYAKKYGDIFVTCTGNY---HVITHDHMR 885 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~---v~~~~e~l~~aDvvi~atG~~---~vi~~~~~~ 885 (1027)
+|+|+|+|.+|..+|+.++..|.+|+++|+++.+...+...|.. ..+++++ ..+|+||.|+... .++. +...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~~~~~~~~-~l~~ 79 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQLILPTLE-KLIP 79 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHHHHHHHHH-HHGG
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHHHHHHHHH-HHHh
Confidence 69999999999999999999999999999999877766666762 3467777 8999999999754 2222 2235
Q ss_pred cCCCCeEEEEecCCC
Q psy15208 886 DMKDQAIVCNIGHFD 900 (1027)
Q Consensus 886 ~mk~gailvNvG~~d 900 (1027)
.+++++++++++..+
T Consensus 80 ~~~~~~~vv~~~~~~ 94 (279)
T 2f1k_A 80 HLSPTAIVTDVASVK 94 (279)
T ss_dssp GSCTTCEEEECCSCC
T ss_pred hCCCCCEEEECCCCc
Confidence 688999999986654
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00013 Score=79.78 Aligned_cols=88 Identities=18% Similarity=0.171 Sum_probs=69.9
Q ss_pred CEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcc---cCcHHHHhc
Q psy15208 811 KIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYH---VITHDHMRD 886 (1027)
Q Consensus 811 k~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~---vi~~~~~~~ 886 (1027)
.+|+|+|+ |.+|..+|+.++..|.+|+++|+++.+...+...|+++.+..+++..+|+||.|+.... ++ .+....
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~~~~v~-~~l~~~ 90 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNIIEKVA-EDIVPR 90 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHHHHHHH-HHHGGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchHHHHHH-HHHHHh
Confidence 58999999 99999999999999999999999987766665567766677788889999999987543 22 122345
Q ss_pred CCCCeEEEEecCC
Q psy15208 887 MKDQAIVCNIGHF 899 (1027)
Q Consensus 887 mk~gailvNvG~~ 899 (1027)
++++.+++++...
T Consensus 91 l~~~~ivv~~s~~ 103 (286)
T 3c24_A 91 VRPGTIVLILDAA 103 (286)
T ss_dssp SCTTCEEEESCSH
T ss_pred CCCCCEEEECCCC
Confidence 7889999986553
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00013 Score=82.37 Aligned_cols=100 Identities=15% Similarity=0.146 Sum_probs=73.7
Q ss_pred HHHHhhhcCccccC-CEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchh----HHHHhhcCcE-EcCHHH--------
Q psy15208 797 IDGIKRATDVMIAG-KIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPIC----ALQAAMEGFL-VVTMEY-------- 861 (1027)
Q Consensus 797 ~~~i~r~t~~~l~G-k~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r----~~~A~~~G~~-v~~~~e-------- 861 (1027)
+.++.+..+ .-.| ++|+|.|+ |.||+.+++.|+.+|++|+++..++.+ ...+...|++ +.+..+
T Consensus 155 ~~~l~~~~~-~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~ 233 (364)
T 1gu7_A 155 YLMLTHYVK-LTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGP 233 (364)
T ss_dssp HHHHHSSSC-CCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHH
T ss_pred HHHHHHhhc-cCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHH
Confidence 444444323 3478 99999998 999999999999999998887654433 3456677875 333321
Q ss_pred Hh--------ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 862 AK--------KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 862 ~l--------~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.+ ..+|++++++|..... +.++.++++|.++.+|..
T Consensus 234 ~i~~~t~~~~~g~Dvvid~~G~~~~~--~~~~~l~~~G~~v~~g~~ 277 (364)
T 1gu7_A 234 TIKEWIKQSGGEAKLALNCVGGKSST--GIARKLNNNGLMLTYGGM 277 (364)
T ss_dssp HHHHHHHHHTCCEEEEEESSCHHHHH--HHHHTSCTTCEEEECCCC
T ss_pred HHHHHhhccCCCceEEEECCCchhHH--HHHHHhccCCEEEEecCC
Confidence 12 1479999999987643 568999999999999975
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00014 Score=70.62 Aligned_cols=68 Identities=15% Similarity=0.082 Sum_probs=53.9
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc--C---H---HHH-hccCCEEEecCCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV--T---M---EYA-KKYGDIFVTCTGNY 876 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~--~---~---~e~-l~~aDvvi~atG~~ 876 (1027)
.+++++|+|+|.+|+.+|+.|+..|.+|+++|.++.+...+...|+.+. + . .++ +.++|+||.++++.
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDD 81 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCH
Confidence 4678999999999999999999999999999999988777777777643 1 1 111 34689998888854
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0003 Score=84.70 Aligned_cols=124 Identities=23% Similarity=0.162 Sum_probs=82.6
Q ss_pred eEEEEEEecCCcc---ccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhC-CcEEEEEcCC----CCCCCCCCCCCcc
Q psy15208 16 ILHCAINFPSSIK---LLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL-GYISIRMNFR----GVGASSGTYDSGN 87 (1027)
Q Consensus 16 ~I~~~l~~P~~~~---~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~-Gy~Vla~Dlr----GhG~S~g~~~~~~ 87 (1027)
.++..+|.|.... ...+.|++|++||+++..|+... +.. ..|+++ ++.|+.+||| |+..+........
T Consensus 111 cL~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~--~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~~~~~n 186 (574)
T 3bix_A 111 CLYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNL--YDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGN 186 (574)
T ss_dssp CCEEEEEEEC--------CCEEEEEECCCSSSSSCCGGG--SCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSSSCCCC
T ss_pred CCEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCc--cCc--hhhhccCCEEEEEeCCcCcccccCcCCCCCCCCc
Confidence 5777788886421 12357999999998876666432 221 335544 6999999999 3322221111223
Q ss_pred chHHHHHHHHHHHHHh---CCC--CcEEEEEechhHHHHHHHHHhcCCc-CCccEEEEEccC
Q psy15208 88 GETDDMEILLRYIQKK---YPY--LPIILAGFSFGTFVQAKLQKRLDKE-ISIKILILISVA 143 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~---~~~--~pviLVGhSmGG~vAl~~A~~~p~~-~~V~gLVli~p~ 143 (1027)
.-+.|..++++|+++. ++. .+|.|+|+|.||.++..++.....+ ..++++|+.++.
T Consensus 187 ~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 187 YGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 4588999999999874 333 3599999999999998888765443 357888888764
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00019 Score=66.60 Aligned_cols=87 Identities=14% Similarity=0.054 Sum_probs=63.2
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCC-CEEEEEcCCchhHHHHhhcCcEEc--------CHHHHhccCCEEEecCCCcccC
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALS-AQVWIIEIDPICALQAAMEGFLVV--------TMEYAKKYGDIFVTCTGNYHVI 879 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~G-a~ViV~d~dp~r~~~A~~~G~~v~--------~~~e~l~~aDvvi~atG~~~vi 879 (1027)
.+++|+|+|+|.+|+.+++.+...| .+|+++++++.+.......++... .+.+++..+|+||.++|...
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~-- 81 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL-- 81 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG--
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh--
Confidence 4689999999999999999999999 799999999987766655665432 24456678999999987542
Q ss_pred cHHHHh-cCCCCeEEEEec
Q psy15208 880 THDHMR-DMKDQAIVCNIG 897 (1027)
Q Consensus 880 ~~~~~~-~mk~gailvNvG 897 (1027)
...... ..+.|...++++
T Consensus 82 ~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 82 TPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp HHHHHHHHHHTTCEEECCC
T ss_pred hHHHHHHHHHhCCCEEEec
Confidence 222222 235566666554
|
| >2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.66 E-value=1.3e-05 Score=83.63 Aligned_cols=91 Identities=18% Similarity=0.149 Sum_probs=68.0
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcHHHHhcC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDM 887 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~m 887 (1027)
+.+++|+|+|+|.+|..+|+.+...|.+|+++++++. .......|+.+.+..+++..+|+||.++....+-....+..+
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~~~~~~~~~aDvVilav~~~~~~~v~~l~~~ 95 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEVLCYSEAASRSDVIVLAVHREHYDFLAELADS 95 (201)
Confidence 5678999999999999999999999999999998875 333333566655777888899999988865421110114446
Q ss_pred CCCeEEEEecCC
Q psy15208 888 KDQAIVCNIGHF 899 (1027)
Q Consensus 888 k~gailvNvG~~ 899 (1027)
+++.++++++-.
T Consensus 96 ~~~~ivI~~~~G 107 (201)
T 2yjz_A 96 LKGRVLIDVSNN 107 (201)
Confidence 678888888765
|
| >3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00016 Score=79.05 Aligned_cols=88 Identities=15% Similarity=0.118 Sum_probs=69.3
Q ss_pred CEEEEEcCChhHHHHHHHHHhC--CCEEEEEcCCchhHHHHhhcCc--E-EcCHHHHhccCCEEEecCCCcc---cCcHH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRAL--SAQVWIIEIDPICALQAAMEGF--L-VVTMEYAKKYGDIFVTCTGNYH---VITHD 882 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~--Ga~ViV~d~dp~r~~~A~~~G~--~-v~~~~e~l~~aDvvi~atG~~~---vi~~~ 882 (1027)
++|+|||+|.+|..+|..++.. |.+|+++|+++.+...+...|. . ..+.++++..+|+||.|+.... ++. +
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~-~ 85 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKKTIDFIK-I 85 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHHHHHHHH-H
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHHHHHHHH-H
Confidence 5899999999999999999877 6799999999877776666776 2 4467778889999999997653 222 2
Q ss_pred HHhc-CCCCeEEEEecCC
Q psy15208 883 HMRD-MKDQAIVCNIGHF 899 (1027)
Q Consensus 883 ~~~~-mk~gailvNvG~~ 899 (1027)
.... ++++.++++++..
T Consensus 86 l~~~~l~~~~ivi~~~~~ 103 (290)
T 3b1f_A 86 LADLDLKEDVIITDAGST 103 (290)
T ss_dssp HHTSCCCTTCEEECCCSC
T ss_pred HHhcCCCCCCEEEECCCC
Confidence 2345 7899999988764
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00012 Score=82.19 Aligned_cols=100 Identities=17% Similarity=0.104 Sum_probs=77.3
Q ss_pred HHHHhhhcCccccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcC----HHHHh------cc
Q psy15208 797 IDGIKRATDVMIAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT----MEYAK------KY 865 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~----~~e~l------~~ 865 (1027)
+.++.+..+ .-.|++|+|+| .|.||+.+++.++.+|++|+++ .++.+...+...|++.++ ..+.+ ..
T Consensus 139 ~~~l~~~~~-~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~~~~~~~~~~~~~~~~~g 216 (343)
T 3gaz_A 139 WEGLVDRAQ-VQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQG 216 (343)
T ss_dssp HHHHTTTTC-CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEETTSCHHHHHHHHHTTSC
T ss_pred HHHHHHhcC-CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEeccCCCHHHHHHHHhcCCC
Confidence 344433333 35899999999 7999999999999999999999 888888888888887532 22222 14
Q ss_pred CCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 866 GDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 866 aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
.|++++++|... + ...++.|++++.++.+|...
T Consensus 217 ~D~vid~~g~~~-~-~~~~~~l~~~G~iv~~g~~~ 249 (343)
T 3gaz_A 217 FDLVYDTLGGPV-L-DASFSAVKRFGHVVSCLGWG 249 (343)
T ss_dssp EEEEEESSCTHH-H-HHHHHHEEEEEEEEESCCCS
T ss_pred ceEEEECCCcHH-H-HHHHHHHhcCCeEEEEcccC
Confidence 799999999742 3 35588999999999998764
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00014 Score=78.43 Aligned_cols=92 Identities=13% Similarity=0.193 Sum_probs=70.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCchhHHHHhhc-CcEE-cCHHHHhccCCEEEecCCCccc--CcHH
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDPICALQAAME-GFLV-VTMEYAKKYGDIFVTCTGNYHV--ITHD 882 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~~A~~~-G~~v-~~~~e~l~~aDvvi~atG~~~v--i~~~ 882 (1027)
+.+.+|+|+|+|.+|..+|+.++..|.+ |.++|+++.+....... |+.+ .++++++.++|+||.|+....+ +-.+
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~~~~v~~~ 87 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSAFAELLQG 87 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHHHHHHHHH
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHHHHHHHHH
Confidence 3456899999999999999999999998 89999998776654443 7764 4677888899999999976532 0112
Q ss_pred HHhcCCCCeEEEEecCC
Q psy15208 883 HMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~ 899 (1027)
....++++.++++++..
T Consensus 88 l~~~~~~~~ivv~~s~~ 104 (266)
T 3d1l_A 88 IVEGKREEALMVHTAGS 104 (266)
T ss_dssp HHTTCCTTCEEEECCTT
T ss_pred HHhhcCCCcEEEECCCC
Confidence 23457789999998665
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00023 Score=76.44 Aligned_cols=85 Identities=8% Similarity=0.058 Sum_probs=68.6
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh-hcCcEE-cCHHHHhccCCEEEecCCCcccCcHHHHhcCC
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA-MEGFLV-VTMEYAKKYGDIFVTCTGNYHVITHDHMRDMK 888 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-~~G~~v-~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk 888 (1027)
.+|+|+|+|.+|+.++..+...|.+|.++|+++.+..... ..|+.+ .+.++++..+|+|+.|+... ...+.+..++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~~~--~~~~v~~~l~ 81 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQ--LFETVLKPLH 81 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSCGG--GHHHHHTTSC
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeCcH--hHHHHHHHhc
Confidence 3799999999999999999999999999999987766544 347664 36788888999999999743 2345677788
Q ss_pred CCeEEEEec
Q psy15208 889 DQAIVCNIG 897 (1027)
Q Consensus 889 ~gailvNvG 897 (1027)
++.++++..
T Consensus 82 ~~~~vv~~~ 90 (259)
T 2ahr_A 82 FKQPIISMA 90 (259)
T ss_dssp CCSCEEECC
T ss_pred cCCEEEEeC
Confidence 888998884
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00013 Score=79.56 Aligned_cols=88 Identities=13% Similarity=0.089 Sum_probs=69.1
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCCCcccCcHH------H
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTGNYHVITHD------H 883 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG~~~vi~~~------~ 883 (1027)
.+|+|+|+|.+|..+|..+...|.+|+++| ++.+.......|+.+ .++++++..+|+|+.|++....+..- .
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 479999999999999999999999999999 887766665567663 46788888999999999765422211 1
Q ss_pred HhcCCCCeEEEEecCC
Q psy15208 884 MRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~ 899 (1027)
.+.++++.++++++..
T Consensus 83 ~~~l~~~~~vv~~s~~ 98 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSI 98 (295)
T ss_dssp TTSCCTTEEEEECSCC
T ss_pred hhcCCCCCEEEECCCC
Confidence 2357899999998765
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00016 Score=69.47 Aligned_cols=69 Identities=16% Similarity=0.160 Sum_probs=52.2
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-----CH---HHH-hccCCEEEecCCCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-----TM---EYA-KKYGDIFVTCTGNY 876 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-----~~---~e~-l~~aDvvi~atG~~ 876 (1027)
+.+++|+|+|+|.+|+.+++.++..|.+|+++|.++.+...+...|..+. +. .++ +..+|+|+.+++..
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN 81 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence 46788999999999999999999999999999999876655555565432 11 222 45789999888864
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00011 Score=80.08 Aligned_cols=112 Identities=13% Similarity=0.102 Sum_probs=73.7
Q ss_pred ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEE-EcCCCCCCCC-CCCCCccchHHH
Q psy15208 15 GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIR-MNFRGVGASS-GTYDSGNGETDD 92 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla-~DlrGhG~S~-g~~~~~~~~~~D 92 (1027)
..+.++++.+.. .+.+||.+||.. + +.+.+.+.++.+.. .|+++.+.-. +.+..+....+|
T Consensus 61 ~~~~~~v~~~~~-----~~~iVva~RGT~----~--------~~d~l~d~~~~~~~~~~~~~~~~vh~Gf~~~~~~~~~~ 123 (269)
T 1tib_A 61 GDVTGFLALDNT-----NKLIVLSFRGSR----S--------IENWIGNLNFDLKEINDICSGCRGHDGFTSSWRSVADT 123 (269)
T ss_dssp TTEEEEEEEETT-----TTEEEEEECCCS----C--------THHHHTCCCCCEEECTTTSTTCEEEHHHHHHHHHHHHH
T ss_pred cCcEEEEEEECC-----CCEEEEEEeCCC----C--------HHHHHHhcCeeeeecCCCCCCCEecHHHHHHHHHHHHH
Confidence 356667766643 467899999941 1 34567778887776 4655421100 111223446778
Q ss_pred HHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCc-CCccEEEEEccC
Q psy15208 93 MEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKE-ISIKILILISVA 143 (1027)
Q Consensus 93 v~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~-~~V~gLVli~p~ 143 (1027)
+...++.+..+++..+++++||||||.+|..++...... ..+..+...+|.
T Consensus 124 ~~~~~~~~~~~~~~~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P~ 175 (269)
T 1tib_A 124 LRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPR 175 (269)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCCC
T ss_pred HHHHHHHHHHHCCCceEEEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCCC
Confidence 888888888888888999999999999999999987542 124444444443
|
| >2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=9.7e-05 Score=84.30 Aligned_cols=80 Identities=16% Similarity=0.275 Sum_probs=66.2
Q ss_pred cCCEEEEEcC-ChhHHHHHHHHHhCCC---EEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 809 AGKIAVIIGY-GDVGKGSAQAMRALSA---QVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 809 ~Gk~VvViG~-G~IG~~vA~~a~~~Ga---~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
..-+|+|+|+ |.+|++.++.|+++|+ +|.+.|+++... |..+ +.+.++|+||+|.- .+.+++
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~------g~~~----~~i~~aDivIn~vlig~~aP~Lvt 282 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSR------GGPF----DEIPQADIFINCIYLSKPIAPFTN 282 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTT------CSCC----THHHHSSEEEECCCCCSSCCCSCC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccccc------CCch----hhHhhCCEEEECcCcCCCCCcccC
Confidence 5678999999 9999999999999998 899998876211 3221 45679999999763 468999
Q ss_pred HHHHhcC-CCCeEEEEecC
Q psy15208 881 HDHMRDM-KDQAIVCNIGH 898 (1027)
Q Consensus 881 ~~~~~~m-k~gailvNvG~ 898 (1027)
+++++.| |+|.++|++..
T Consensus 283 ~e~v~~m~k~gsVIVDVA~ 301 (394)
T 2qrj_A 283 MEKLNNPNRRLRTVVDVSA 301 (394)
T ss_dssp HHHHCCTTCCCCEEEETTC
T ss_pred HHHHhcCcCCCeEEEEEec
Confidence 9999999 99999999854
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00015 Score=81.84 Aligned_cols=100 Identities=16% Similarity=0.118 Sum_probs=76.8
Q ss_pred HHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh----c-
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK----K- 864 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l----~- 864 (1027)
+.++.+..+ ...|++|+|+|+ |.||+.+++.++..|++|++++.++.+...+...|.+ +.+ ..+.+ .
T Consensus 159 ~~al~~~~~-~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~ 237 (351)
T 1yb5_A 159 YRALIHSAC-VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGE 237 (351)
T ss_dssp HHHHHTTSC-CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCT
T ss_pred HHHHHHhhC-CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCC
Confidence 444443333 357999999998 9999999999999999999999999888888888874 222 11222 1
Q ss_pred -cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 865 -YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 865 -~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
..|++|+++|... + ...++.++++|.++.+|..
T Consensus 238 ~~~D~vi~~~G~~~-~-~~~~~~l~~~G~iv~~g~~ 271 (351)
T 1yb5_A 238 KGIDIIIEMLANVN-L-SKDLSLLSHGGRVIVVGSR 271 (351)
T ss_dssp TCEEEEEESCHHHH-H-HHHHHHEEEEEEEEECCCC
T ss_pred CCcEEEEECCChHH-H-HHHHHhccCCCEEEEEecC
Confidence 4799999998753 3 3558999999999999965
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00011 Score=82.21 Aligned_cols=70 Identities=10% Similarity=0.113 Sum_probs=52.7
Q ss_pred CcEEEEEechhHHHHHHHHHhcCCcCCcc-EEEEEccCCCc----------------C--------------CC---CCC
Q psy15208 107 LPIILAGFSFGTFVQAKLQKRLDKEISIK-ILILISVAVKK----------------W--------------LI---PEV 152 (1027)
Q Consensus 107 ~pviLVGhSmGG~vAl~~A~~~p~~~~V~-gLVli~p~~~~----------------~--------------~l---~~i 152 (1027)
.+++|.|+|+||.+++.++..+|+ .++ +++++++.+.. . .+ ..+
T Consensus 11 ~RI~v~G~S~GG~mA~~~a~~~p~--~fa~g~~v~ag~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l 88 (318)
T 2d81_A 11 NSVSVSGLASGGYMAAQLGVAYSD--VFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWSGNQIASVANL 88 (318)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTT--TSCSEEEEESCCCTTTTSSSCGGGGSTTCCCCCHHHHHHHHHHBTTTBCCGGGG
T ss_pred ceEEEEEECHHHHHHHHHHHHCch--hhhccceEEecccccccchHHHHHHhhccCCCCCCHHHHHHHhhcccCChhHcC
Confidence 369999999999999999999998 677 87776542100 0 00 011
Q ss_pred -CCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 153 -PKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 153 -~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
..|++++||++|++||++.+.++.+.
T Consensus 89 ~~~Pvli~HG~~D~vVP~~~s~~~~~~ 115 (318)
T 2d81_A 89 GQRKIYMWTGSSDTTVGPNVMNQLKAQ 115 (318)
T ss_dssp GGCEEEEEEETTCCSSCHHHHHHHHHH
T ss_pred CCCcEEEEeCCCCCCcCHHHHHHHHHH
Confidence 25899999999999999998866653
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=9.2e-05 Score=82.41 Aligned_cols=91 Identities=15% Similarity=0.036 Sum_probs=73.3
Q ss_pred ccCC-EEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHH----h-----ccCCEEEecCCC
Q psy15208 808 IAGK-IAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYA----K-----KYGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk-~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~----l-----~~aDvvi~atG~ 875 (1027)
..|+ +|+|+|+ |.||+.+++.++.+|++|++++.++.+...+...|++ +.+..+. + ...|++++++|.
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~ 227 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGG 227 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCT
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcH
Confidence 3565 8999998 9999999999999999999999988888888888875 4443322 1 136999999998
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
. .+ .+.++.++++|.++.+|...
T Consensus 228 ~-~~-~~~~~~l~~~G~iv~~G~~~ 250 (330)
T 1tt7_A 228 K-QL-ASLLSKIQYGGSVAVSGLTG 250 (330)
T ss_dssp H-HH-HHHHTTEEEEEEEEECCCSS
T ss_pred H-HH-HHHHHhhcCCCEEEEEecCC
Confidence 5 33 45689999999999999763
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00017 Score=81.21 Aligned_cols=100 Identities=19% Similarity=0.242 Sum_probs=75.8
Q ss_pred HHHHhhhcCccccC--CEEEEEcC-ChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhh-cCcE-EcC-----HHHHhc-
Q psy15208 797 IDGIKRATDVMIAG--KIAVIIGY-GDVGKGSAQAMRALSA-QVWIIEIDPICALQAAM-EGFL-VVT-----MEYAKK- 864 (1027)
Q Consensus 797 ~~~i~r~t~~~l~G--k~VvViG~-G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~-~G~~-v~~-----~~e~l~- 864 (1027)
|.++.+..+ ...| ++|+|+|. |.||+.+++.++..|+ +|++++.++.+...+.. .|.+ +.+ ..+.+.
T Consensus 147 ~~al~~~~~-~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~ 225 (357)
T 2zb4_A 147 LIGIQEKGH-ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRE 225 (357)
T ss_dssp HHHHHHHSC-CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHH
T ss_pred HHHHHHhcC-CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHH
Confidence 445534334 3578 99999998 9999999999999999 99999999877776665 7764 322 222222
Q ss_pred ----cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 865 ----YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 865 ----~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
..|++|+++|.. . ....++.|+++|.++.+|..
T Consensus 226 ~~~~~~d~vi~~~G~~-~-~~~~~~~l~~~G~iv~~G~~ 262 (357)
T 2zb4_A 226 SCPAGVDVYFDNVGGN-I-SDTVISQMNENSHIILCGQI 262 (357)
T ss_dssp HCTTCEEEEEESCCHH-H-HHHHHHTEEEEEEEEECCCG
T ss_pred hcCCCCCEEEECCCHH-H-HHHHHHHhccCcEEEEECCc
Confidence 379999999963 2 34568999999999999975
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.42 E-value=8.8e-05 Score=82.50 Aligned_cols=91 Identities=14% Similarity=0.032 Sum_probs=72.0
Q ss_pred ccCC-EEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHH----HHh-----ccCCEEEecCCC
Q psy15208 808 IAGK-IAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTME----YAK-----KYGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk-~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~----e~l-----~~aDvvi~atG~ 875 (1027)
..|+ +|+|+|+ |.||+.+++.++.+|++|++++.++.+...+...|++ +.+.. +.+ ...|++++++|.
T Consensus 147 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~ 226 (328)
T 1xa0_A 147 TPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG 226 (328)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT
T ss_pred CCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcH
Confidence 3565 8999998 9999999999999999999999988888888888875 32211 111 136999999998
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
. .+ ...++.++++|.++.+|...
T Consensus 227 ~-~~-~~~~~~l~~~G~~v~~G~~~ 249 (328)
T 1xa0_A 227 R-TL-ATVLSRMRYGGAVAVSGLTG 249 (328)
T ss_dssp T-TH-HHHHHTEEEEEEEEECSCCS
T ss_pred H-HH-HHHHHhhccCCEEEEEeecC
Confidence 4 33 45689999999999999763
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00029 Score=77.34 Aligned_cols=103 Identities=16% Similarity=0.104 Sum_probs=73.3
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHH-hhc-----C--cEEc---CHHH
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQA-AME-----G--FLVV---TMEY 861 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A-~~~-----G--~~v~---~~~e 861 (1027)
.++..++.+. +..+.||+|+|+|+|.+|+.++..|...|+ +|+++++++.++.+. ... + +... ++++
T Consensus 112 ~G~~~~l~~~-~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~ 190 (283)
T 3jyo_A 112 SGFGRGMEEG-LPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIED 190 (283)
T ss_dssp HHHHHHHHHH-CTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHH
T ss_pred HHHHHHHHHh-CcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHH
Confidence 5666666543 446899999999999999999999999999 799999998776532 211 1 2222 5667
Q ss_pred HhccCCEEEecCCCc--c----cCcHHHHhcCCCCeEEEEecCCC
Q psy15208 862 AKKYGDIFVTCTGNY--H----VITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 862 ~l~~aDvvi~atG~~--~----vi~~~~~~~mk~gailvNvG~~d 900 (1027)
.+.++|+||+||+.- . .+. .+.++++.+++.+-..+
T Consensus 191 ~l~~~DiVInaTp~Gm~~~~~~pi~---~~~l~~~~~v~DlvY~P 232 (283)
T 3jyo_A 191 VIAAADGVVNATPMGMPAHPGTAFD---VSCLTKDHWVGDVVYMP 232 (283)
T ss_dssp HHHHSSEEEECSSTTSTTSCSCSSC---GGGCCTTCEEEECCCSS
T ss_pred HHhcCCEEEECCCCCCCCCCCCCCC---HHHhCCCCEEEEecCCC
Confidence 788999999998531 1 122 34567777777765543
|
| >1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.045 Score=60.99 Aligned_cols=130 Identities=15% Similarity=0.056 Sum_probs=90.0
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCC--hhHHHHHHHHHhCCCEEEEEcCCc--
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYG--DVGKGSAQAMRALSAQVWIIEIDP-- 843 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G--~IG~~vA~~a~~~Ga~ViV~d~dp-- 843 (1027)
..+||||--+ -.-+ .-|.+.|- +.+..+ .+.|.+|+++|=| ++.+..+..+..+|++|.++-+..
T Consensus 134 ~~vPVINa~~-~~~H-------PtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~ 204 (325)
T 1vlv_A 134 SGVPVYNGLT-DEFH-------PTQALADLMTIEENFG-RLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELK 204 (325)
T ss_dssp HCSCEEESCC-SSCC-------HHHHHHHHHHHHHHHS-CSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGC
T ss_pred CCCCEEeCCC-CCCC-------cHHHHHHHHHHHHHhC-CcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCcccc
Confidence 4689998433 1111 23555443 333334 4799999999996 799999999999999999983321
Q ss_pred -hh-H-----HHHhhcCcE---EcCHHHHhccCCEEEecC----C------------CcccCcHHHHhcC-CCCeEEEEe
Q psy15208 844 -IC-A-----LQAAMEGFL---VVTMEYAKKYGDIFVTCT----G------------NYHVITHDHMRDM-KDQAIVCNI 896 (1027)
Q Consensus 844 -~r-~-----~~A~~~G~~---v~~~~e~l~~aDvvi~at----G------------~~~vi~~~~~~~m-k~gailvNv 896 (1027)
.. . ..|...|.. +.+++++++++|||.+.. | ..--++.+.++.+ |+++++.-.
T Consensus 205 p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~ 284 (325)
T 1vlv_A 205 PRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHC 284 (325)
T ss_dssp CCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECCCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEeccccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECC
Confidence 11 1 113356744 457999999999998733 1 1245788889999 999999999
Q ss_pred cCC--Ccccchhhh
Q psy15208 897 GHF--DNEIEVEKL 908 (1027)
Q Consensus 897 G~~--d~eid~~~l 908 (1027)
+.. ..||+-+.+
T Consensus 285 LP~~Rg~EI~~eV~ 298 (325)
T 1vlv_A 285 LPAVKGQEVTYEVI 298 (325)
T ss_dssp SCCCBTTTBCHHHH
T ss_pred CCCCCCcccCHHHh
Confidence 986 567776644
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00042 Score=77.17 Aligned_cols=105 Identities=14% Similarity=0.125 Sum_probs=73.0
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCC---chhHHHHh-h----cCc--EEcC----
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEID---PICALQAA-M----EGF--LVVT---- 858 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~d---p~r~~~A~-~----~G~--~v~~---- 858 (1027)
.++...+.+ .+..+.||+|+|+|+|.+|++++..|+..|+ +|++++++ +.++.+.. . .+. .+.+
T Consensus 139 ~Gf~~~L~~-~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~ 217 (315)
T 3tnl_A 139 TGYMRALKE-AGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDH 217 (315)
T ss_dssp HHHHHHHHH-TTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH
T ss_pred HHHHHHHHH-cCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchH
Confidence 566777655 3667899999999999999999999999999 89999998 55544321 1 222 2332
Q ss_pred --HHHHhccCCEEEecCCCc---c----cCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 859 --MEYAKKYGDIFVTCTGNY---H----VITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 859 --~~e~l~~aDvvi~atG~~---~----vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
+.+.+.++|+||+||+.- . .+. ..+.++++.+++.+-..+.
T Consensus 218 ~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~P~ 267 (315)
T 3tnl_A 218 EQLRKEIAESVIFTNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYKPT 267 (315)
T ss_dssp HHHHHHHHTCSEEEECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCSSS
T ss_pred HHHHhhhcCCCEEEECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccCCC
Confidence 345567899999998521 1 111 2345778888877755443
|
| >3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00075 Score=75.15 Aligned_cols=97 Identities=19% Similarity=0.210 Sum_probs=73.5
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHHHhh----cCcE--EcCHHHHhccCCEEEecCCCc-ccC
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQAAM----EGFL--VVTMEYAKKYGDIFVTCTGNY-HVI 879 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~A~~----~G~~--v~~~~e~l~~aDvvi~atG~~-~vi 879 (1027)
..++++|+|.|.+|+..++.++. ++. +|.|++++ .....+.. .|++ +.++++++.++|+||+||+.. .++
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~~~~eav~~aDIVi~aT~s~~pvl 198 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMAAPADIAAQADIVVTATRSTTPLF 198 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEECCHHHHHHHCSEEEECCCCSSCSS
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEeCHHHHHhhCCEEEEccCCCCccc
Confidence 57899999999999999998876 455 79999998 22222221 3653 448999999999999999764 455
Q ss_pred cHHHHhcCCCCeEEEEecCCC---cccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFD---NEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d---~eid~~~l~ 909 (1027)
.. +.+++|+.++.+|... .|++.+.+.
T Consensus 199 ~~---~~l~~G~~V~~vGs~~p~~~El~~~~~~ 228 (313)
T 3hdj_A 199 AG---QALRAGAFVGAIGSSLPHTRELDDEALR 228 (313)
T ss_dssp CG---GGCCTTCEEEECCCSSTTCCCCCHHHHH
T ss_pred CH---HHcCCCcEEEECCCCCCchhhcCHHHHh
Confidence 53 4689999999999862 577766554
|
| >2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00063 Score=78.87 Aligned_cols=122 Identities=19% Similarity=0.195 Sum_probs=84.5
Q ss_pred cchhhhhhHHHHHhh---hcCccccCCEEEEEcCChhHHHHHHHHHhCCC---EEEEEc----CC--chhH-----HH--
Q psy15208 788 NLYGCRESLIDGIKR---ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA---QVWIIE----ID--PICA-----LQ-- 848 (1027)
Q Consensus 788 n~~g~~~s~~~~i~r---~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga---~ViV~d----~d--p~r~-----~~-- 848 (1027)
..++++-..+.++.+ ..+..+.+++|+|+|+|..|++++..|...|+ +|+++| ++ ..+. +.
T Consensus 161 D~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~ 240 (439)
T 2dvm_A 161 DQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPY 240 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTT
T ss_pred CCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHH
Confidence 345666222333332 33667899999999999999999999999998 799998 65 1111 11
Q ss_pred ----HhhcCc--EEcCHHHHhccCCEEEecCCCc-ccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 849 ----AAMEGF--LVVTMEYAKKYGDIFVTCTGNY-HVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 849 ----A~~~G~--~v~~~~e~l~~aDvvi~atG~~-~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+..... ...++.+++..+|++|.+|+.. ++++.+.++.|+++.++..+.-...|+......
T Consensus 241 ~~~~a~~~~~~~~~~~L~e~l~~aDVlInaT~~~~G~~~~e~v~~m~~~~iVfDLynP~~t~~~~~A~ 308 (439)
T 2dvm_A 241 RGWLLKKTNGENIEGGPQEALKDADVLISFTRPGPGVIKPQWIEKMNEDAIVFPLANPVPEILPEEAK 308 (439)
T ss_dssp CHHHHTTSCTTCCCSSHHHHHTTCSEEEECSCCCSSSSCHHHHTTSCTTCEEEECCSSSCSSCHHHHH
T ss_pred HHHHhhccccccccccHHHHhccCCEEEEcCCCccCCCChHHHHhcCCCCEEEECCCCCCcchHHHHH
Confidence 111111 2345788899999999999864 788888889999999999883333455544443
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00064 Score=74.56 Aligned_cols=102 Identities=16% Similarity=0.259 Sum_probs=72.9
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcEEcCHHHH--hccCCEEE
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFLVVTMEYA--KKYGDIFV 870 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~v~~~~e~--l~~aDvvi 870 (1027)
.++...+.+. +..+.|++|+|+|+|.+|+.++..|+..|+ +|+|+++++.++... ...+...+.++. + ++|+||
T Consensus 107 ~G~~~~L~~~-~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~L-a~~~~~~~~~~l~~l-~~DivI 183 (282)
T 3fbt_A 107 IGFGKMLSKF-RVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI-YGEFKVISYDELSNL-KGDVII 183 (282)
T ss_dssp HHHHHHHHHT-TCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHH-CTTSEEEEHHHHTTC-CCSEEE
T ss_pred HHHHHHHHHc-CCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH-HHhcCcccHHHHHhc-cCCEEE
Confidence 5667776543 667899999999999999999999999999 899999998776532 223333333332 4 899999
Q ss_pred ecCCC--cc-----cCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 871 TCTGN--YH-----VITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 871 ~atG~--~~-----vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
+||+. .. .+. .+.++++.+++.+-..+.
T Consensus 184 naTp~Gm~~~~~~~pi~---~~~l~~~~~v~DlvY~P~ 218 (282)
T 3fbt_A 184 NCTPKGMYPKEGESPVD---KEVVAKFSSAVDLIYNPV 218 (282)
T ss_dssp ECSSTTSTTSTTCCSSC---HHHHTTCSEEEESCCSSS
T ss_pred ECCccCccCCCccCCCC---HHHcCCCCEEEEEeeCCC
Confidence 99843 11 133 334677888887766543
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00047 Score=77.74 Aligned_cols=100 Identities=16% Similarity=0.157 Sum_probs=72.3
Q ss_pred HHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEE-EcCCch---hHHHHhhcCcE-EcCHHH--------H
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWI-IEIDPI---CALQAAMEGFL-VVTMEY--------A 862 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV-~d~dp~---r~~~A~~~G~~-v~~~~e--------~ 862 (1027)
|.++.+..+ .-.|++|+|+|. |.||+.+++.++.+|++|++ ++.++. +...+...|++ +.+..+ .
T Consensus 156 ~~~l~~~~~-~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~ 234 (357)
T 1zsy_A 156 YRMLMDFEQ-LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNF 234 (357)
T ss_dssp HHHHHHSSC-CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGT
T ss_pred HHHHHHHhc-cCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHH
Confidence 344444333 358999999998 99999999999999997665 455442 34557778875 444321 1
Q ss_pred hc---cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 863 KK---YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 863 l~---~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.. ..|++++++|.... .+.++.++++|.++.+|..
T Consensus 235 ~~~~~~~Dvvid~~g~~~~--~~~~~~l~~~G~iv~~G~~ 272 (357)
T 1zsy_A 235 FKDMPQPRLALNCVGGKSS--TELLRQLARGGTMVTYGGM 272 (357)
T ss_dssp TSSSCCCSEEEESSCHHHH--HHHHTTSCTTCEEEECCCC
T ss_pred HhCCCCceEEEECCCcHHH--HHHHHhhCCCCEEEEEecC
Confidence 11 37999999997754 3568999999999999853
|
| >1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.068 Score=59.77 Aligned_cols=123 Identities=15% Similarity=-0.003 Sum_probs=85.3
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCC--hhHHHHHHHHHhCCCEEEEEcCCc--
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYG--DVGKGSAQAMRALSAQVWIIEIDP-- 843 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G--~IG~~vA~~a~~~Ga~ViV~d~dp-- 843 (1027)
..+||||-- + .. .+ .-|.+.|- +.+..+..+.|.+|+++|=| ++.+..+..+..+|++|.++-+..
T Consensus 121 s~vPVINa~-~--~~----~H-PtQ~LaDl~Ti~e~~g~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~ 192 (335)
T 1dxh_A 121 AGVPVFNGL-T--DE----YH-PTQMLADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALW 192 (335)
T ss_dssp SSSCEEEEE-C--SS----CC-HHHHHHHHHHHHHTCSSCGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGS
T ss_pred CCCCEEcCC-C--CC----CC-cHHHHHHHHHHHHHcCCCcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccC
Confidence 578999832 2 11 11 23555544 33333424789999999997 899999999999999999983321
Q ss_pred -hh-H-----HHHhhcCcE---EcCHHHHhccCCEEEecCC----C-------------cccCcHHHHhcC-CCCeEEEE
Q psy15208 844 -IC-A-----LQAAMEGFL---VVTMEYAKKYGDIFVTCTG----N-------------YHVITHDHMRDM-KDQAIVCN 895 (1027)
Q Consensus 844 -~r-~-----~~A~~~G~~---v~~~~e~l~~aDvvi~atG----~-------------~~vi~~~~~~~m-k~gailvN 895 (1027)
.. . ..|...|.. ..+++++++++|||.+..- . .--++.+.++.+ |+++++.-
T Consensus 193 p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mH 272 (335)
T 1dxh_A 193 PHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMH 272 (335)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeCCccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEEC
Confidence 11 1 113356744 4579999999999987432 1 235788889999 99999999
Q ss_pred ecCCC
Q psy15208 896 IGHFD 900 (1027)
Q Consensus 896 vG~~d 900 (1027)
.+...
T Consensus 273 cLP~~ 277 (335)
T 1dxh_A 273 CLPAF 277 (335)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 98853
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00091 Score=63.89 Aligned_cols=85 Identities=21% Similarity=0.316 Sum_probs=58.2
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-cCcEEc-----CHH---HH-hccCCEEEecCCCccc-
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-EGFLVV-----TME---YA-KKYGDIFVTCTGNYHV- 878 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-~G~~v~-----~~~---e~-l~~aDvvi~atG~~~v- 878 (1027)
+.+|+|+|+|.+|+.+|+.|+..|.+|+++|.++.+...... .|+.+. +.+ ++ +..+|+|+.+++....
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 468999999999999999999999999999999876655443 366432 121 12 4679999999876531
Q ss_pred -CcHHHHhcCCCCeEEE
Q psy15208 879 -ITHDHMRDMKDQAIVC 894 (1027)
Q Consensus 879 -i~~~~~~~mk~gailv 894 (1027)
.-....+.++++.+++
T Consensus 84 ~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 84 LMSSLLAKSYGINKTIA 100 (140)
T ss_dssp HHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 1112344456554444
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0005 Score=76.48 Aligned_cols=106 Identities=15% Similarity=0.116 Sum_probs=71.1
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCC---chhHHHHh-----hcCcE--Ec---CH
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEID---PICALQAA-----MEGFL--VV---TM 859 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~d---p~r~~~A~-----~~G~~--v~---~~ 859 (1027)
.++..++.+. +..+.||+|+|+|+|.+|++++..|+..|+ +|+|++++ +.++.+.. ..+.. +. ++
T Consensus 133 ~Gf~~~L~~~-~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l 211 (312)
T 3t4e_A 133 TGHIRAIKES-GFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQ 211 (312)
T ss_dssp HHHHHHHHHT-TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCH
T ss_pred HHHHHHHHhc-CCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhh
Confidence 5667776553 667899999999999999999999999999 89999999 55544321 12222 22 22
Q ss_pred ---HHHhccCCEEEecCCCcc-cCcHH----HHhcCCCCeEEEEecCCC
Q psy15208 860 ---EYAKKYGDIFVTCTGNYH-VITHD----HMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 860 ---~e~l~~aDvvi~atG~~~-vi~~~----~~~~mk~gailvNvG~~d 900 (1027)
.+.+.++|+||+||+..- -.... ..+.++++.++..+-..+
T Consensus 212 ~~~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P 260 (312)
T 3t4e_A 212 HAFTEALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNP 260 (312)
T ss_dssp HHHHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSS
T ss_pred hhhHhhccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCC
Confidence 445778999999985320 00000 124567777777665443
|
| >3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0017 Score=74.77 Aligned_cols=129 Identities=14% Similarity=0.114 Sum_probs=96.6
Q ss_pred CccceEeecccccccccccchhhhhhHHHHHhh---hcCccccCCEEEEEcCChhHHHHHHHHHhCCC---EEEEEcCCc
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDGIKR---ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA---QVWIIEIDP 843 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~r---~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga---~ViV~d~dp 843 (1027)
+.+||| .|..+||+--...++.. .++..+...+||+.|+|.-|.++|+.+...|+ +|+++|..-
T Consensus 186 ~~ipvF----------nDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~G 255 (487)
T 3nv9_A 186 CDIPVW----------HDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKG 255 (487)
T ss_dssp CSSCEE----------ETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTE
T ss_pred ccCCcc----------ccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccc
Confidence 667776 46678998876666544 45777899999999999999999999999999 799998752
Q ss_pred ----hhH------------HHHhhcC-cEEcCHHHHhccCCEEEecCCC-cccCcHHHHhcCCCCeEEEEecCCCcccch
Q psy15208 844 ----ICA------------LQAAMEG-FLVVTMEYAKKYGDIFVTCTGN-YHVITHDHMRDMKDQAIVCNIGHFDNEIEV 905 (1027)
Q Consensus 844 ----~r~------------~~A~~~G-~~v~~~~e~l~~aDvvi~atG~-~~vi~~~~~~~mk~gailvNvG~~d~eid~ 905 (1027)
.|. ..|.... -...++.++++.+|++|-++.. +++++++.++.|.+..++.-..-...|+..
T Consensus 256 li~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~adVlIG~S~~~pg~ft~e~V~~Ma~~PIIFaLSNPtpEi~p 335 (487)
T 3nv9_A 256 SLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACVGADVLISLSTPGPGVVKAEWIKSMGEKPIVFCCANPVPEIYP 335 (487)
T ss_dssp ECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTTCSEEEECCCSSCCCCCHHHHHTSCSSCEEEECCSSSCSSCH
T ss_pred cccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHhcCCEEEEecccCCCCCCHHHHHhhcCCCEEEECCCCCccCCH
Confidence 221 1122221 1345799999999999988733 689999999999998888766655556665
Q ss_pred hhh
Q psy15208 906 EKL 908 (1027)
Q Consensus 906 ~~l 908 (1027)
+..
T Consensus 336 e~A 338 (487)
T 3nv9_A 336 YEA 338 (487)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
| >1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0009 Score=75.65 Aligned_cols=98 Identities=20% Similarity=0.261 Sum_probs=74.0
Q ss_pred ccCCEEEEEcCChhHHHHHHHHH-hCCC-EEEEEcCCchhHHHHhhc-----CcE---EcCHHHHhccCCEEEecCCCc-
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMR-ALSA-QVWIIEIDPICALQAAME-----GFL---VVTMEYAKKYGDIFVTCTGNY- 876 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~-~~Ga-~ViV~d~dp~r~~~A~~~-----G~~---v~~~~e~l~~aDvvi~atG~~- 876 (1027)
...++++|||+|.+|+.+++.+. ..+. +|.|+++++.++...... |+. ..++++++.++|+|++||.+.
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~ 206 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA 206 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC
Confidence 46789999999999999988764 3555 899999999876653322 643 246888999999999999864
Q ss_pred --ccCcHHHHhcCCCCeEEEEecCC---Ccccchhhh
Q psy15208 877 --HVITHDHMRDMKDQAIVCNIGHF---DNEIEVEKL 908 (1027)
Q Consensus 877 --~vi~~~~~~~mk~gailvNvG~~---d~eid~~~l 908 (1027)
.++.. +.+++|..++.+|.. ..|++...+
T Consensus 207 ~~pvl~~---~~l~~G~~V~~vgs~~p~~~El~~~~~ 240 (350)
T 1x7d_A 207 YATIITP---DMLEPGMHLNAVGGDCPGKTELHADVL 240 (350)
T ss_dssp EEEEECG---GGCCTTCEEEECSCCBTTBEEECHHHH
T ss_pred CCceecH---HHcCCCCEEEECCCCCCCceeeCHHHH
Confidence 45553 468999999999976 246665433
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00056 Score=73.90 Aligned_cols=99 Identities=12% Similarity=0.227 Sum_probs=71.3
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHh-hcC-cEEcCHHHHhccCCEEE
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAA-MEG-FLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~-~~G-~~v~~~~e~l~~aDvvi 870 (1027)
.++...+.+. .+.| +++|+|+|..|++++..|...|+ +|+|+++++.++.+.. ..+ ....++.+++.++|+||
T Consensus 96 ~G~~~~l~~~---~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVI 171 (253)
T 3u62_A 96 VGVVKSLEGV---EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLF 171 (253)
T ss_dssp HHHHHHTTTC---CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEE
T ss_pred HHHHHHHHhc---CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEE
Confidence 5667666544 3578 99999999999999999999999 8999999987765422 212 12345667788999999
Q ss_pred ecCCC--c---ccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGN--Y---HVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~--~---~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+||+. . ..+.. +.++++.+++++-..
T Consensus 172 natp~gm~p~~~~i~~---~~l~~~~~V~Divy~ 202 (253)
T 3u62_A 172 NTTSVGMKGEELPVSD---DSLKNLSLVYDVIYF 202 (253)
T ss_dssp ECSSTTTTSCCCSCCH---HHHTTCSEEEECSSS
T ss_pred ECCCCCCCCCCCCCCH---HHhCcCCEEEEeeCC
Confidence 98842 1 12332 335788888877554
|
| >1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.067 Score=59.36 Aligned_cols=130 Identities=20% Similarity=0.131 Sum_probs=90.4
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCc---
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDP--- 843 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp--- 843 (1027)
..+||||--+. .-| .-|.+.|- +.+..+ .+.|.+|+++|= +++.+..+..+..+|++|.++-+..
T Consensus 122 ~~vPVINa~~~-~~H-------PtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~ 192 (315)
T 1pvv_A 122 ATVPVINGLSD-FSH-------PCQALADYMTIWEKKG-TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEP 192 (315)
T ss_dssp CSSCEEEEECS-SCC-------HHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCC
T ss_pred CCCCEEcCCCC-CCC-------cHHHHHHHHHHHHHhC-CcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccC
Confidence 57899984331 111 23555443 333334 478999999998 6799999999999999999983321
Q ss_pred hh-H-----HHHhhcCcE---EcCHHHHhccCCEEEecC----CC------------cccCcHHHHhcCCCCeEEEEecC
Q psy15208 844 IC-A-----LQAAMEGFL---VVTMEYAKKYGDIFVTCT----GN------------YHVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 844 ~r-~-----~~A~~~G~~---v~~~~e~l~~aDvvi~at----G~------------~~vi~~~~~~~mk~gailvNvG~ 898 (1027)
.. . ..|...|.. ..+++++++++|||++.. |. .--++.+.++.+|+++++...+.
T Consensus 193 ~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~lP 272 (315)
T 1pvv_A 193 DEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLP 272 (315)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSC
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcceeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCCC
Confidence 11 1 123356743 457999999999998743 21 23578888999999999999998
Q ss_pred C--Ccccchhhh
Q psy15208 899 F--DNEIEVEKL 908 (1027)
Q Consensus 899 ~--d~eid~~~l 908 (1027)
. ..||+-+.+
T Consensus 273 ~~Rg~EI~~eV~ 284 (315)
T 1pvv_A 273 AHRGEEVTDDVI 284 (315)
T ss_dssp CCBTTTBCHHHH
T ss_pred CCCCCccCHHHh
Confidence 6 567776644
|
| >1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0014 Score=73.08 Aligned_cols=95 Identities=21% Similarity=0.191 Sum_probs=71.6
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHHHhh-c-----CcEEcCHHHHhccCCEEEecCCCc-cc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQAAM-E-----GFLVVTMEYAKKYGDIFVTCTGNY-HV 878 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~A~~-~-----G~~v~~~~e~l~~aDvvi~atG~~-~v 878 (1027)
...++++|+|+|.+|+.+++.++. .+. +|.|+++++.++..... . .+...++++++ ++|+|++||.+. .+
T Consensus 123 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~~~~~~e~v-~aDvVi~aTp~~~pv 201 (322)
T 1omo_A 123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEAS-RCDVLVTTTPSRKPV 201 (322)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHT-SSSEEEECCCCSSCC
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEEECCHHHHh-CCCEEEEeeCCCCce
Confidence 367899999999999999998877 444 79999999987665332 1 12345788899 999999998754 34
Q ss_pred CcHHHHhcCCCCeEEEEecCC---Ccccchh
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHF---DNEIEVE 906 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~---d~eid~~ 906 (1027)
+.. +.+++|..++.+|.+ ..|++.+
T Consensus 202 ~~~---~~l~~G~~V~~ig~~~p~~~el~~~ 229 (322)
T 1omo_A 202 VKA---EWVEEGTHINAIGADGPGKQELDVE 229 (322)
T ss_dssp BCG---GGCCTTCEEEECSCCSTTCCCBCHH
T ss_pred ecH---HHcCCCeEEEECCCCCCCccccCHH
Confidence 442 468999999999876 2456544
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0005 Score=73.47 Aligned_cols=85 Identities=20% Similarity=0.251 Sum_probs=64.8
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCC----EEEEEcCCchhHHHHh-hcCcEEc-CHHHHhccCCEEEecCCCc---ccCcH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSA----QVWIIEIDPICALQAA-MEGFLVV-TMEYAKKYGDIFVTCTGNY---HVITH 881 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga----~ViV~d~dp~r~~~A~-~~G~~v~-~~~e~l~~aDvvi~atG~~---~vi~~ 881 (1027)
++|+|||+|.+|..+|+.+...|. +|+++|+++.+..... ..|+.+. +..+++.++|+||.|+... .++ .
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~~~~~~v~-~ 81 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKPDLYASII-N 81 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCTTTHHHHC--
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCHHHHHHHH-H
Confidence 579999999999999999999997 9999999998776654 3588754 6788889999999998432 122 1
Q ss_pred HHHhcCCCCeEEEEe
Q psy15208 882 DHMRDMKDQAIVCNI 896 (1027)
Q Consensus 882 ~~~~~mk~gailvNv 896 (1027)
+....++++.+++.+
T Consensus 82 ~l~~~l~~~~~vvs~ 96 (247)
T 3gt0_A 82 EIKEIIKNDAIIVTI 96 (247)
T ss_dssp --CCSSCTTCEEEEC
T ss_pred HHHhhcCCCCEEEEe
Confidence 222346778888754
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.001 Score=73.15 Aligned_cols=85 Identities=15% Similarity=0.119 Sum_probs=62.4
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh-----------hcC------------------cE-EcCHH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA-----------MEG------------------FL-VVTME 860 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-----------~~G------------------~~-v~~~~ 860 (1027)
++|+|+|.|.+|.++|..+...|.+|+++|+++.+...+. ..| +. ..+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 6899999999999999999999999999999986654321 122 33 34577
Q ss_pred HHhccCCEEEecCCCcc----cCcHHHHhcCCCCeEEEE
Q psy15208 861 YAKKYGDIFVTCTGNYH----VITHDHMRDMKDQAIVCN 895 (1027)
Q Consensus 861 e~l~~aDvvi~atG~~~----vi~~~~~~~mk~gailvN 895 (1027)
+++.++|+||.|+.... .+-.+.-+.++++++++.
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s 134 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFAS 134 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEE
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEE
Confidence 78899999999986532 112222345788888874
|
| >2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A | Back alignment and structure |
|---|
Probab=97.21 E-value=0.031 Score=61.80 Aligned_cols=130 Identities=18% Similarity=0.113 Sum_probs=90.1
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCC--hhHHHHHHHHHhCCCEEEEEcCCc--
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYG--DVGKGSAQAMRALSAQVWIIEIDP-- 843 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G--~IG~~vA~~a~~~Ga~ViV~d~dp-- 843 (1027)
..+||||- .+ .. .+ .-|.+.|- +.+..+ .+.|.+|+++|=| ++.+..+..+..+|++|.++-+..
T Consensus 115 ~~vPVINa-~~--~~----~H-PtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~ 185 (307)
T 2i6u_A 115 ATVPVINA-LS--DE----FH-PCQVLADLQTIAERKG-ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFL 185 (307)
T ss_dssp CSSCEEES-CC--SS----CC-HHHHHHHHHHHHHHHS-CCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSC
T ss_pred CCCCEEcC-CC--CC----cC-ccHHHHHHHHHHHHhC-CcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCcccc
Confidence 57899983 32 11 11 23555443 333334 4789999999996 899999999999999999983321
Q ss_pred -hh-H-H----HHhhcCc--E-EcCHHHHhccCCEEEecC----CC------------cccCcHHHHhcCCCCeEEEEec
Q psy15208 844 -IC-A-L----QAAMEGF--L-VVTMEYAKKYGDIFVTCT----GN------------YHVITHDHMRDMKDQAIVCNIG 897 (1027)
Q Consensus 844 -~r-~-~----~A~~~G~--~-v~~~~e~l~~aDvvi~at----G~------------~~vi~~~~~~~mk~gailvNvG 897 (1027)
.. . . .|...|. . ..+++++++++|||++.. |. .--++.+.++.+|+++++.-.+
T Consensus 186 ~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 265 (307)
T 2i6u_A 186 PDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCL 265 (307)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECS
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEecceecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCC
Confidence 11 1 1 1335563 3 457999999999998733 21 2357888899999999999999
Q ss_pred CC--Ccccchhhh
Q psy15208 898 HF--DNEIEVEKL 908 (1027)
Q Consensus 898 ~~--d~eid~~~l 908 (1027)
.. ..||+-+.+
T Consensus 266 P~~Rg~EI~~eV~ 278 (307)
T 2i6u_A 266 PAHRGDEITDAVM 278 (307)
T ss_dssp CCCBTTTBCHHHH
T ss_pred CCCCCcccCHhHh
Confidence 86 567776644
|
| >2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.078 Score=59.70 Aligned_cols=122 Identities=16% Similarity=0.129 Sum_probs=84.2
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCC--hhHHHHHHHHHhCCCEEEEEcCCc--
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYG--DVGKGSAQAMRALSAQVWIIEIDP-- 843 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G--~IG~~vA~~a~~~Ga~ViV~d~dp-- 843 (1027)
..+||||-- + .. + + .-|.+.|- +.+..+ .+.|.+|+++|=| ++.+..+..+..+|++|.++-+..
T Consensus 143 s~vPVINa~-~--~~-~---H-PtQaLaDl~Ti~E~~g-~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~ 213 (359)
T 2w37_A 143 SGVPVWNGL-T--DE-W---H-PTQMLADFMTVKENFG-KLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALF 213 (359)
T ss_dssp SSSCEEEEE-C--SS-C---C-HHHHHHHHHHHHHHHS-CCTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGS
T ss_pred CCCCEEcCC-C--CC-C---C-ccHHHHHHHHHHHHhC-CcCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccc
Confidence 578999843 2 11 1 1 23555443 333334 5899999999996 799999999999999999983321
Q ss_pred -hh-H-H----HHhhcCc--E-EcCHHHHhccCCEEEecC----CC-----------cccCcHHHHhcCC---CCeEEEE
Q psy15208 844 -IC-A-L----QAAMEGF--L-VVTMEYAKKYGDIFVTCT----GN-----------YHVITHDHMRDMK---DQAIVCN 895 (1027)
Q Consensus 844 -~r-~-~----~A~~~G~--~-v~~~~e~l~~aDvvi~at----G~-----------~~vi~~~~~~~mk---~gailvN 895 (1027)
.. . . .|...|. . ..+++++++++|||++.. |. .--++.+.++.+| +++++.-
T Consensus 214 p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MH 293 (359)
T 2w37_A 214 PTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDVWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMH 293 (359)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEcccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEEC
Confidence 11 1 1 1335563 3 457999999999998743 21 2457888889999 9999999
Q ss_pred ecCCC
Q psy15208 896 IGHFD 900 (1027)
Q Consensus 896 vG~~d 900 (1027)
++...
T Consensus 294 cLP~~ 298 (359)
T 2w37_A 294 CLPAF 298 (359)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 98853
|
| >1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.067 Score=59.75 Aligned_cols=123 Identities=12% Similarity=0.025 Sum_probs=85.0
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--Hhhh-cCccccCCEEEEEcCC--hhHHHHHHHHHhCCCEEEEEcCCc-
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRA-TDVMIAGKIAVIIGYG--DVGKGSAQAMRALSAQVWIIEIDP- 843 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~-t~~~l~Gk~VvViG~G--~IG~~vA~~a~~~Ga~ViV~d~dp- 843 (1027)
..+||||- .+ .. .+ .-|.+.|- +.+. .+..+.|.+|+++|=| ++.+..+..+..+|++|.++-+..
T Consensus 120 ~~vPVINa-~~--~~----~H-PtQ~LaDl~Ti~e~~~g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~ 191 (333)
T 1duv_G 120 ASVPVWNG-LT--NE----FH-PTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQAC 191 (333)
T ss_dssp HSSCEEES-CC--SS----CC-HHHHHHHHHHHHHHSTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred CCCCeEcC-CC--CC----CC-chHHHHHHHHHHHHhcCCCCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCccc
Confidence 46899983 32 11 11 23555443 3333 3424789999999997 799999999999999999983321
Q ss_pred --hh-H-----HHHhhcCcE---EcCHHHHhccCCEEEecC----CC-------------cccCcHHHHhcC-CCCeEEE
Q psy15208 844 --IC-A-----LQAAMEGFL---VVTMEYAKKYGDIFVTCT----GN-------------YHVITHDHMRDM-KDQAIVC 894 (1027)
Q Consensus 844 --~r-~-----~~A~~~G~~---v~~~~e~l~~aDvvi~at----G~-------------~~vi~~~~~~~m-k~gailv 894 (1027)
.. . ..|...|.. ..+++++++++|||.+.. |. .--++.+.++.+ |+++++.
T Consensus 192 ~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~m 271 (333)
T 1duv_G 192 WPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFL 271 (333)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEE
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeCCccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEE
Confidence 11 1 123356744 457999999999998743 21 235788889999 9999999
Q ss_pred EecCCC
Q psy15208 895 NIGHFD 900 (1027)
Q Consensus 895 NvG~~d 900 (1027)
-.+...
T Consensus 272 HcLP~~ 277 (333)
T 1duv_G 272 HCLPAF 277 (333)
T ss_dssp ECSCCC
T ss_pred CCCCCC
Confidence 998853
|
| >1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00084 Score=72.10 Aligned_cols=85 Identities=18% Similarity=0.179 Sum_probs=64.7
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcC--CchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCc--HHHHhcC
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEI--DPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVIT--HDHMRDM 887 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~--dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~--~~~~~~m 887 (1027)
+|+|+|+|.+|..+|..+...|.+|+++|+ ++.+.......|+. .+.++++..+|+||.|+....... .+..+.+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~aDvvi~~v~~~~~~~~~~~~~~~~ 80 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT-ETSEEDVYSCPVVISAVTPGVALGAARRAGRHV 80 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE-ECCHHHHHTSSEEEECSCGGGHHHHHHHHHTTC
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc-CCHHHHHhcCCEEEEECCCHHHHHHHHHHHHhc
Confidence 699999999999999999999999999877 55555545556777 777888899999999987653211 2334556
Q ss_pred CCCeEEEEecCC
Q psy15208 888 KDQAIVCNIGHF 899 (1027)
Q Consensus 888 k~gailvNvG~~ 899 (1027)
++ ++++++..
T Consensus 81 ~~--~vi~~s~~ 90 (264)
T 1i36_A 81 RG--IYVDINNI 90 (264)
T ss_dssp CS--EEEECSCC
T ss_pred Cc--EEEEccCC
Confidence 66 88888654
|
| >2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0007 Score=79.73 Aligned_cols=92 Identities=11% Similarity=0.040 Sum_probs=71.8
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc----CcEE-cCHHHHhcc---CCEEEecCCCc---
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME----GFLV-VTMEYAKKY---GDIFVTCTGNY--- 876 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~----G~~v-~~~~e~l~~---aDvvi~atG~~--- 876 (1027)
..-++|+|||.|.+|..+|..+...|.+|+++++++.+....... |+.. .++++++.. +|+||.++...
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 92 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGT 92 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHH
Confidence 456789999999999999999999999999999998776654443 6664 467888776 99999988663
Q ss_pred -ccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 877 -HVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 877 -~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
.++ .+....+++|.++++++-..
T Consensus 93 ~~vl-~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 93 DAAI-DSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHHH-HHHGGGCCTTCEEEECSCCC
T ss_pred HHHH-HHHHhhcCCCCEEEECCCCC
Confidence 233 23356688999999998764
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0012 Score=72.13 Aligned_cols=87 Identities=16% Similarity=0.162 Sum_probs=58.2
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC-CCCCCccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS-GTYDSGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~-g~~~~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
.+.+||.+||.. + +.+.+.+.++.....|+...+... +.+..+.....++...++.+..+++..+++
T Consensus 73 ~~~iVvafRGT~----~--------~~d~~~d~~~~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~ 140 (279)
T 1tia_A 73 NSAVVLAFRGSY----S--------VRNWVADATFVHTNPGLCDGCLAELGFWSSWKLVRDDIIKELKEVVAQNPNYELV 140 (279)
T ss_pred CCEEEEEEeCcC----C--------HHHHHHhCCcEeecCCCCCCCccChhHHHHHHHHHHHHHHHHHHHHHHCCCCeEE
Confidence 467899999941 1 334455667776665543222211 221223345667777777777788888999
Q ss_pred EEEechhHHHHHHHHHhcCC
Q psy15208 111 LAGFSFGTFVQAKLQKRLDK 130 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~ 130 (1027)
++||||||.+|..++.....
T Consensus 141 vtGHSLGGalA~l~a~~l~~ 160 (279)
T 1tia_A 141 VVGHSLGAAVATLAATDLRG 160 (279)
T ss_pred EEecCHHHHHHHHHHHHHHh
Confidence 99999999999999988654
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00072 Score=74.50 Aligned_cols=79 Identities=16% Similarity=0.223 Sum_probs=63.4
Q ss_pred CCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcc---cCcHHHHh
Q psy15208 810 GKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYH---VITHDHMR 885 (1027)
Q Consensus 810 Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~---vi~~~~~~ 885 (1027)
.++|+||| +|.+|..+|..++..|.+|+++|+++.. +..+++..+|+||.|+.... ++. +...
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~------------~~~~~~~~aDvVilavp~~~~~~vl~-~l~~ 87 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA------------VAESILANADVVIVSVPINLTLETIE-RLKP 87 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG------------GHHHHHTTCSEEEECSCGGGHHHHHH-HHGG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc------------CHHHHhcCCCEEEEeCCHHHHHHHHH-HHHh
Confidence 56899999 9999999999999999999999988742 45677889999999987553 222 2234
Q ss_pred cCCCCeEEEEecCCCc
Q psy15208 886 DMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 886 ~mk~gailvNvG~~d~ 901 (1027)
.+++++++++++....
T Consensus 88 ~l~~~~iv~~~~svk~ 103 (298)
T 2pv7_A 88 YLTENMLLADLTSVKR 103 (298)
T ss_dssp GCCTTSEEEECCSCCH
T ss_pred hcCCCcEEEECCCCCc
Confidence 5889999999987643
|
| >1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00073 Score=72.45 Aligned_cols=82 Identities=11% Similarity=0.162 Sum_probs=64.4
Q ss_pred EEEEEcCChhHHHHHHHHHhCC-CEEEEEcCCchhHHHHhh-cCcEEc-CHHHHhccCCEEEecCCCcccCcHHHHhcCC
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALS-AQVWIIEIDPICALQAAM-EGFLVV-TMEYAKKYGDIFVTCTGNYHVITHDHMRDMK 888 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~G-a~ViV~d~dp~r~~~A~~-~G~~v~-~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk 888 (1027)
+|+|+|+|.+|..+|..+...| .+|+++|+++.+...... .|+.+. +.++++ .+|+||.|+. ...+ .+.+..++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~-~~v~~~l~ 78 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDM-EAACKNIR 78 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHH-HHHHTTCC
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhH-HHHHHHhc
Confidence 6999999999999999999999 899999999877665544 387754 566777 9999999997 3322 34455554
Q ss_pred C-CeEEEEe
Q psy15208 889 D-QAIVCNI 896 (1027)
Q Consensus 889 ~-gailvNv 896 (1027)
+ +.+++++
T Consensus 79 ~~~~ivv~~ 87 (263)
T 1yqg_A 79 TNGALVLSV 87 (263)
T ss_dssp CTTCEEEEC
T ss_pred cCCCEEEEe
Confidence 3 8888887
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0014 Score=73.40 Aligned_cols=86 Identities=15% Similarity=0.169 Sum_probs=65.5
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc-Cc---------------EEcCHHHHhccCCEEEecCC
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME-GF---------------LVVTMEYAKKYGDIFVTCTG 874 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~-G~---------------~v~~~~e~l~~aDvvi~atG 874 (1027)
.+|+|+|+|.+|..+|..++..|.+|+++++++.+....... |. ...++++++..+|+||.|++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 589999999999999999999999999999998766554443 32 13457777889999999997
Q ss_pred CcccC--cHHHHhcCCCCeEEEEe
Q psy15208 875 NYHVI--THDHMRDMKDQAIVCNI 896 (1027)
Q Consensus 875 ~~~vi--~~~~~~~mk~gailvNv 896 (1027)
....- -.+....++++.++++.
T Consensus 85 ~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 85 AIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEEES
T ss_pred chHHHHHHHHHHHhCCCCCEEEEc
Confidence 65421 11223457889988887
|
| >2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.033 Score=61.44 Aligned_cols=131 Identities=12% Similarity=0.033 Sum_probs=88.7
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhH
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICA 846 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~ 846 (1027)
..+||||-- +..- + .-|.+.|- +.+..+ .+.|.+|+++|= +++.+..+..+..+|++|.++-+.....
T Consensus 121 ~~vPVINa~-~~~~------H-PtQaLaDl~Ti~e~~g-~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~ 191 (301)
T 2ef0_A 121 AKVPVVNAL-SDRA------H-PLQALADLLTLKEVFG-GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEP 191 (301)
T ss_dssp CSSCEEEEE-CSSC------C-HHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCC
T ss_pred CCCCEEeCC-CCcc------C-chHHHHHHHHHHHHhC-CcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcC
Confidence 578999843 2111 1 23555443 333334 478999999998 6799999999999999999984322111
Q ss_pred --HHHhhcCcE-EcCHHHHhccCCEEEecC----C------------CcccCcHHHHhcCCCCeEEEEecCC--Ccccch
Q psy15208 847 --LQAAMEGFL-VVTMEYAKKYGDIFVTCT----G------------NYHVITHDHMRDMKDQAIVCNIGHF--DNEIEV 905 (1027)
Q Consensus 847 --~~A~~~G~~-v~~~~e~l~~aDvvi~at----G------------~~~vi~~~~~~~mk~gailvNvG~~--d~eid~ 905 (1027)
..-....+. ..+++++++++|||.+.. | ..--++.+.++.+|+++++...+.. ..||+-
T Consensus 192 ~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mHplP~~Rg~EI~~ 271 (301)
T 2ef0_A 192 DPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAEREKRLRDFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETTE 271 (301)
T ss_dssp CHHHHHHHTCEEESCHHHHHTTCSEEEECCCC--------CHHHHHTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBCH
T ss_pred CHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccchhHHHHHhhccccCHHHHHhcCCCcEEECCCCCCCCCccCH
Confidence 111111255 567999999999998733 1 1235788889999999999999986 578876
Q ss_pred hhhh
Q psy15208 906 EKLK 909 (1027)
Q Consensus 906 ~~l~ 909 (1027)
+.+.
T Consensus 272 eV~d 275 (301)
T 2ef0_A 272 EAVH 275 (301)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 6443
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00099 Score=72.84 Aligned_cols=87 Identities=10% Similarity=0.009 Sum_probs=67.1
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCC---EEEEEcCCchhHHHHhh-cCcEEc-CHHHHhccCCEEEecCCCcccCcHHH-
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSA---QVWIIEIDPICALQAAM-EGFLVV-TMEYAKKYGDIFVTCTGNYHVITHDH- 883 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga---~ViV~d~dp~r~~~A~~-~G~~v~-~~~e~l~~aDvvi~atG~~~vi~~~~- 883 (1027)
.++|+|||+|.+|..+|+.+...|. +|+++|+++.+...... .|+.+. +..+++..+|+||.|+... .+. +.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p~-~~~-~vl 80 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKPH-QIK-MVC 80 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCGG-GHH-HHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCHH-HHH-HHH
Confidence 4689999999999999999999998 89999999988776555 488754 6888899999999998543 222 22
Q ss_pred --H-hc-CCCCeEEEEecC
Q psy15208 884 --M-RD-MKDQAIVCNIGH 898 (1027)
Q Consensus 884 --~-~~-mk~gailvNvG~ 898 (1027)
+ .. ++++.+++++..
T Consensus 81 ~~l~~~~l~~~~iiiS~~a 99 (280)
T 3tri_A 81 EELKDILSETKILVISLAV 99 (280)
T ss_dssp HHHHHHHHTTTCEEEECCT
T ss_pred HHHHhhccCCCeEEEEecC
Confidence 2 23 577777776544
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00095 Score=78.57 Aligned_cols=89 Identities=10% Similarity=0.015 Sum_probs=70.9
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc---CcE---EcCHHHHhc---cCCEEEecCCCc----c
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME---GFL---VVTMEYAKK---YGDIFVTCTGNY----H 877 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~---G~~---v~~~~e~l~---~aDvvi~atG~~----~ 877 (1027)
.+|+|||.|.+|..+|+.++..|.+|+++|+++.+....... |.. ..++++++. .+|+|+.++... .
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~ 84 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDD 84 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHHH
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHHH
Confidence 579999999999999999999999999999999877665543 322 356777776 599999988764 2
Q ss_pred cCcHHHHhcCCCCeEEEEecCCC
Q psy15208 878 VITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 878 vi~~~~~~~mk~gailvNvG~~d 900 (1027)
++ .+....|++|.+++++|...
T Consensus 85 vl-~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 85 FI-EKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp HH-HHHGGGCCTTCEEEECSCCC
T ss_pred HH-HHHHHhcCCCCEEEEcCCCC
Confidence 33 34467799999999998864
|
| >2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.001 Score=78.72 Aligned_cols=90 Identities=9% Similarity=-0.023 Sum_probs=71.9
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-----cCcEE-cCHHHHhcc---CCEEEecCCCc----
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-----EGFLV-VTMEYAKKY---GDIFVTCTGNY---- 876 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-----~G~~v-~~~~e~l~~---aDvvi~atG~~---- 876 (1027)
..+|+|||.|.+|..+|..+...|.+|+++|+++.+...... .|+.. .++++++.. +|+||.++...
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 568999999999999999999999999999999987766554 46663 467787766 99999998763
Q ss_pred ccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 877 HVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 877 ~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
.++ .+....+++|.++++++-..
T Consensus 90 ~vl-~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 90 ALI-NQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCC
T ss_pred HHH-HHHHHhCCCCCEEEECCCCC
Confidence 233 23456789999999988653
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0012 Score=64.94 Aligned_cols=67 Identities=12% Similarity=0.019 Sum_probs=49.7
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc-hhHH---HHhhcCcEEcC--------HHHH-hccCCEEEecCCCc
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP-ICAL---QAAMEGFLVVT--------MEYA-KKYGDIFVTCTGNY 876 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp-~r~~---~A~~~G~~v~~--------~~e~-l~~aDvvi~atG~~ 876 (1027)
.++++|+|+|.+|+.+++.|...|.+|+++|.++ .+.. .....|+.+.. +.++ +..+|.|+.++++.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 5689999999999999999999999999999985 3222 12234655431 3333 66789999888764
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0043 Score=70.23 Aligned_cols=107 Identities=13% Similarity=-0.014 Sum_probs=74.2
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcC-----------CCCCCCC----
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNF-----------RGVGASS---- 80 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~Dl-----------rGhG~S~---- 80 (1027)
.+...++.|.+. .++.|++|-+||.. .. ..+||.++.++. +|+|.-.
T Consensus 91 ~~~~~i~lP~~~--~~p~Pvii~i~~~~----~~------------~~~G~a~~~~~~~~v~~~~~~gs~g~g~f~~ly~ 152 (375)
T 3pic_A 91 SFTVTITYPSSG--TAPYPAIIGYGGGS----LP------------APAGVAMINFNNDNIAAQVNTGSRGQGKFYDLYG 152 (375)
T ss_dssp EEEEEEECCSSS--CSSEEEEEEETTCS----SC------------CCTTCEEEEECHHHHSCCSSGGGTTCSHHHHHHC
T ss_pred EEEEEEECCCCC--CCCccEEEEECCCc----cc------------cCCCeEEEEecccccccccCCCCccceecccccC
Confidence 578889999762 25678888888731 11 246999999976 1222100
Q ss_pred --CCCCCccchHHHHHHHHHHHHHhC--CC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 81 --GTYDSGNGETDDMEILLRYIQKKY--PY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 81 --g~~~~~~~~~~Dv~avl~~L~~~~--~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
........++-++..++++|..+. .. .+|.++|||+||..++.+++..+ +|+.+|..++.
T Consensus 153 ~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~---Ri~~~v~~~~g 218 (375)
T 3pic_A 153 SSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK---RIVLTLPQESG 218 (375)
T ss_dssp TTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT---TEEEEEEESCC
T ss_pred CccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC---ceEEEEeccCC
Confidence 001112234668999999998763 33 46999999999999999999875 58999988753
|
| >3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0014 Score=75.89 Aligned_cols=88 Identities=15% Similarity=0.106 Sum_probs=66.9
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh------------------cCcE-EcCHHHHhccCCEEEe
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM------------------EGFL-VVTMEYAKKYGDIFVT 871 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~------------------~G~~-v~~~~e~l~~aDvvi~ 871 (1027)
.+|+|+|.|.+|..+|..++. |.+|+++|+++.+...... .++. ..++++++..+|+||.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDvVii 115 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADYVII 115 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCCEEEE
Confidence 489999999999999999987 9999999999976554322 1344 3467889999999999
Q ss_pred cCCCcc----------cCc---HHHHhcCCCCeEEEEecCCC
Q psy15208 872 CTGNYH----------VIT---HDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 872 atG~~~----------vi~---~~~~~~mk~gailvNvG~~d 900 (1027)
|++++. .+. ....+ |++|+++++.+..+
T Consensus 116 aVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~ 156 (432)
T 3pid_A 116 ATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIP 156 (432)
T ss_dssp CCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCC
T ss_pred eCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCC
Confidence 988751 011 22244 89999999887653
|
| >4hpv_A S-adenosylmethionine synthase; structural genomics, PSI-biology; 2.21A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.014 Score=65.45 Aligned_cols=305 Identities=22% Similarity=0.279 Sum_probs=174.5
Q ss_pred ccccCCCCccccchhhhhhHHHH----HHhh---------Ccc--------cccccccccccceeeeeeeeeecc---c-
Q psy15208 187 PESVSEGHPDKIADQISDAILDE----IFLK---------DLK--------ARVAAETLCNNNLIVLSGEITTDA---N- 241 (1027)
Q Consensus 187 ~Esv~~GHPdkvaDqIsdaILD~----~L~~---------Dp~--------srva~e~l~~~~~v~v~GEist~~---~- 241 (1027)
.|.-..||||.+||.+++++-.+ +++. |+- ++..---+...=.|+++|.+|+.. .
T Consensus 25 VERKGiGHPDsIcDgiaE~vS~aLs~~Yl~~fG~ILHHN~DK~llvgG~s~p~fGGG~vi~Pi~ii~~GRAT~~~~g~~~ 104 (407)
T 4hpv_A 25 VERKGLGHPDYIADAVAEEASRKLSLYYLKKYGVILHHNLDKTLVVGGQATPRFKGGDIIQPIYIIVAGRATTEVKTESG 104 (407)
T ss_dssp EEEECTTSHHHHHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEEEEECCEEEEETTEEEEEECEEEEEEEEECCEEECSSC
T ss_pred EeecCCCCChHHHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEccEeeccCCCceeeeeEEEEEecceEEEECCccc
Confidence 34445799999999888766433 3332 221 122222334445577889888642 2
Q ss_pred ---hhHHHHH----HHHhhh-cCCCCCCCCccccceEEEEeeccCChhhhhccccCCCCCcCCCCCCceeeeeeecCCCC
Q psy15208 242 ---IDYVNIV----RKTIKD-IGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEGEGLNFDQGAGDQGLMFGYACDETP 313 (1027)
Q Consensus 242 ---~d~~~~~----r~~l~~-iGy~~~~~g~~~~~~~~~~~i~~qs~~i~~~v~~~~~~~~~~gagdqg~~~gya~~et~ 313 (1027)
+.+.+|+ |+.|++ +-+-+.+. ..-+...|.+-|+|......++. .-..|-|-....|||-
T Consensus 105 ~~~iPv~~Ia~~AAk~~l~~~l~~lD~e~-----~v~i~~~i~~GS~dL~~vf~r~~---~vp~ANDTS~gVGyAP---- 172 (407)
T 4hpv_A 105 IDQIPVGTIIIESVKEWIRNNFRYLDAER-----HVIVDYKIGKGSSDLVGIFEASK---RVPLSNDTSFGVGFAP---- 172 (407)
T ss_dssp EEECCHHHHHHHHHHHHHHHHCSSCCTTT-----SEEEEEEEECCEEECC------C---CCCBCSSCCEEEEEES----
T ss_pred ccccCHHHHHHHHHHHHHHHhcccCCCCC-----cEEEEeeeCCCChhHHHHhcCCC---CCccccccCceeccCC----
Confidence 5666654 666666 33332221 23455568899999887665432 1247999999999994
Q ss_pred CCCCcHHHHHHHHHHHHHHHHH----cCCCCCCCCCCceeEEEEecCCceeE--EeEEEEeeccCCCCC-hHHHHHHHHH
Q psy15208 314 ELMPSAIYYSHLIVKRQSELRK----NGNLPWLRPDAKSQVTLRYDNGKPVA--IDTIVLSTQHDPEIP-YRSIKEAAIE 386 (1027)
Q Consensus 314 ~~mp~~~~~a~~l~~~~~~~r~----~~~~~~~~pd~k~qv~~~y~~~~~~~--~~~~~~s~qh~~~~~-~~~~~~~~~~ 386 (1027)
|+- ..+|+..++..-. ...+|+.+.|-|.-- ++ +|+-+. |..-.|| .|-.+.+ .-+.++.+++
T Consensus 173 ----lS~--~E~~Vl~~E~~Lns~~~k~~~P~~GeDIKVMG-~R--~g~~i~LTvA~a~v~-r~v~~~~~Y~~~K~~v~~ 242 (407)
T 4hpv_A 173 ----LTK--LEKLVYETERHLNSKQFKAKLPEVGEDIKVMG-LR--RGNEVDLTIAMATIS-ELIEDVNHYINVKEQVRN 242 (407)
T ss_dssp ----CCH--HHHHHHHHHHHHHSHHHHHHCTTEEEEEEEEE-EE--ETTEEEEEEEEEEEG-GGCCSHHHHHHHHHHHHH
T ss_pred ----CCH--HHHHHHHHHHHhcchhhhhhCcccCCceEEEE-Ee--eCCeEEEEEEhhhhh-hhhCCHHHHHHHHHHHHH
Confidence 221 2233333333211 134899999999853 33 333233 2233333 3333332 3345555554
Q ss_pred HhhhcccCCCCCC-CceEEECCCCCc-------eecCC---CCccccCCceeEEecC-CCcccCCCccccCCCC-Cccch
Q psy15208 387 EIIRPIIPKNLLK-NTRYLINPTGRF-------VIGGP---KGDCGLTGRKIIVDTY-GGAAPHGGGAFSGKDP-SKIDR 453 (1027)
Q Consensus 387 ~vi~~~~~~~~~~-~~~~~inp~g~f-------~~ggp---~~d~gltgrk~~vdty-gg~~~hggga~sgkd~-tkvdr 453 (1027)
+|-+-+ .+.... +.+++||....- ++=|- +||.|.+||=.=|--- -.+-|-+==|-+||.| +-|=.
T Consensus 243 ~v~~~a-~~~~~~~~v~v~vNt~D~~~~g~~YLTvtGTSAE~GDdG~VGRGNRvNGLITp~RPMSmEAaAGKNPv~HVGK 321 (407)
T 4hpv_A 243 QILDLA-SKIAPGYNVRVYVNTGDKIDKNILYLTVTGTSAEHGDDGMTGRGNRGVGLITPMRPMSLEATAGKNPVNHVGK 321 (407)
T ss_dssp HHHHHH-HHHCTTSEEEEEECTTCBGGGTBCCEESSSCGGGGTCCEETTSSCCTTSSBCTTSCCCCCCCTTSCTTTCHHH
T ss_pred HHHHHH-HhcCCCCceEEEEecCCCcCCCceEEEecccccccCCCcccccCcccccccCCCCCccccccCCCCCccchhH
Confidence 443321 111112 457889976332 23332 6899999994422100 0223444668899999 45666
Q ss_pred hhhhHHHHHHHHhhhh--hccceeeeEEEEeecc--ccceEEEEeecCCCCCC----hHHHHHHHHHhcC
Q psy15208 454 SAAYVGRYIAKNIVAA--NLAKRCQIQISYAIGV--AKPTSIMVTSFGSGKIS----DEKLTMLVKKHFD 515 (1027)
Q Consensus 454 s~ay~ar~~ak~~v~~--g~a~~~~vq~~yaig~--~~p~s~~v~~~~t~~~~----~~~~~~~~~~~f~ 515 (1027)
-=..+|.-||+.|++. | .++|.|.|-=-||. -+|.-..|......-++ .+++++++++.++
T Consensus 322 IYNvlA~~iA~~I~~~v~g-v~ev~V~llSqIG~PId~P~~a~v~v~~~~g~~~~~~~~~v~~I~~~~L~ 390 (407)
T 4hpv_A 322 LYNVLANLIANKIAQEVKD-VKFSQVQVLGQIGRPIDDPLIANVDVITYDGKLTDETKNEISGIVDEMLS 390 (407)
T ss_dssp HHHHHHHHHHHHHHHHCTT-EEEEEEEEECCTTSBTTSCSEEEEEEEETTSCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCC-cceEEEEEecccCCCCCCCeEEEEEEecCCCCChHHHHHHHHHHHHHHHh
Confidence 6788899999999984 5 58899999889995 47877777666554343 3456777766553
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.001 Score=68.88 Aligned_cols=84 Identities=23% Similarity=0.158 Sum_probs=62.9
Q ss_pred EEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-cC-------cEEcCHHHHhccCCEEEecCCCcccCcHH
Q psy15208 812 IAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-EG-------FLVVTMEYAKKYGDIFVTCTGNYHVITHD 882 (1027)
Q Consensus 812 ~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-~G-------~~v~~~~e~l~~aDvvi~atG~~~vi~~~ 882 (1027)
+|+|+| +|.+|+.+++.+...|.+|+++++++.+...... .+ +...++++++.++|+||.|++... +. +
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~~~-~~-~ 79 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEH-AI-D 79 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHH-HH-H
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCChhh-HH-H
Confidence 689999 9999999999999999999999998866543322 12 344567788889999999987543 22 2
Q ss_pred HHh----cCCCCeEEEEecC
Q psy15208 883 HMR----DMKDQAIVCNIGH 898 (1027)
Q Consensus 883 ~~~----~mk~gailvNvG~ 898 (1027)
.++ .++ +.++++++.
T Consensus 80 ~~~~l~~~~~-~~~vi~~~~ 98 (212)
T 1jay_A 80 TARDLKNILR-EKIVVSPLV 98 (212)
T ss_dssp HHHHTHHHHT-TSEEEECCC
T ss_pred HHHHHHHHcC-CCEEEEcCC
Confidence 232 344 889998876
|
| >2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0019 Score=75.83 Aligned_cols=89 Identities=13% Similarity=0.162 Sum_probs=67.1
Q ss_pred CEEEEEcCChhHHHHHHHHHhC--CCEEEEEcCCchhHHHHh---------------h----cCcEE-cCHHHHhccCCE
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRAL--SAQVWIIEIDPICALQAA---------------M----EGFLV-VTMEYAKKYGDI 868 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~--Ga~ViV~d~dp~r~~~A~---------------~----~G~~v-~~~~e~l~~aDv 868 (1027)
.+|+|+|.|.+|..+|..+... |.+|+++|+++.+..... . .++.. .++++++..+|+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 4899999999999999999988 789999999987654421 1 24543 457788899999
Q ss_pred EEecCCCcccCc-----------------HHHHhcCCCCeEEEEecCC
Q psy15208 869 FVTCTGNYHVIT-----------------HDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 869 vi~atG~~~vi~-----------------~~~~~~mk~gailvNvG~~ 899 (1027)
||.|++++.-.. .+..+.|+++.++++.+..
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv 133 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTV 133 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcC
Confidence 999987653221 1224568999999998654
|
| >3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0012 Score=77.74 Aligned_cols=90 Identities=17% Similarity=0.234 Sum_probs=65.8
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-----------cC-------------cEE-cCHHHHhc
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-----------EG-------------FLV-VTMEYAKK 864 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-----------~G-------------~~v-~~~~e~l~ 864 (1027)
-++|+|||.|.+|.++|+.++..|.+|+++|+++.....+.. .| +.. .++ +++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDI-HALA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCG-GGGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCH-HHhc
Confidence 468999999999999999999999999999999976655432 22 222 234 4688
Q ss_pred cCCEEEecCCCcccC----cHHHHhcCCCCeEEE-EecCCC
Q psy15208 865 YGDIFVTCTGNYHVI----THDHMRDMKDQAIVC-NIGHFD 900 (1027)
Q Consensus 865 ~aDvvi~atG~~~vi----~~~~~~~mk~gailv-NvG~~d 900 (1027)
++|+||+|.....-+ -.+..+.++++++++ |++..+
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~ 124 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSIS 124 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSC
T ss_pred CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCC
Confidence 999999998654212 223345689999994 676543
|
| >3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0035 Score=72.55 Aligned_cols=97 Identities=20% Similarity=0.232 Sum_probs=67.1
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEE-EEcC----------CchhHHHHhh-cC-------cEEcCHHHHhc
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVW-IIEI----------DPICALQAAM-EG-------FLVVTMEYAKK 864 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~Vi-V~d~----------dp~r~~~A~~-~G-------~~v~~~~e~l~ 864 (1027)
.+..+.|++|+|.|+|.+|+.+|+.|..+|++|+ |.|. |+....+... .| .+.++.++.+.
T Consensus 229 ~g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~ 308 (440)
T 3aog_A 229 IGLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWG 308 (440)
T ss_dssp HTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTT
T ss_pred cCCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhc
Confidence 4667899999999999999999999999999987 7777 3333332221 12 34555566653
Q ss_pred -cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccc
Q psy15208 865 -YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIE 904 (1027)
Q Consensus 865 -~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid 904 (1027)
.+||++.|+. .+.++.+....++ +.+|--| .+..+.
T Consensus 309 ~~~DIlvPcA~-~n~i~~~na~~l~--ak~VvEg-AN~p~t 345 (440)
T 3aog_A 309 LPVEFLVPAAL-EKQITEQNAWRIR--ARIVAEG-ANGPTT 345 (440)
T ss_dssp CCCSEEEECSS-SSCBCTTTGGGCC--CSEEECC-SSSCBC
T ss_pred CCCcEEEecCC-cCccchhhHHHcC--CcEEEec-CccccC
Confidence 7999999864 4568888778784 4444333 344444
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00088 Score=77.40 Aligned_cols=85 Identities=13% Similarity=0.253 Sum_probs=63.8
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc--C------HHHH-hccCCEEEecCCCcc--c
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV--T------MEYA-KKYGDIFVTCTGNYH--V 878 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~--~------~~e~-l~~aDvvi~atG~~~--v 878 (1027)
+.+|+|+|+|.+|+.+|+.|+..|.+|+|+|.||.+...+...|+.+. + +.++ +..+|+||.++++.. +
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 456999999999999999999999999999999998888888888644 1 2233 467999999998653 2
Q ss_pred CcHHHHhcCCCCeEEE
Q psy15208 879 ITHDHMRDMKDQAIVC 894 (1027)
Q Consensus 879 i~~~~~~~mk~gailv 894 (1027)
.-....+.+.+...++
T Consensus 84 ~i~~~ar~~~p~~~Ii 99 (413)
T 3l9w_A 84 QLTEMVKEHFPHLQII 99 (413)
T ss_dssp HHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHhCCCCeEE
Confidence 2223345555664444
|
| >2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0016 Score=72.49 Aligned_cols=89 Identities=15% Similarity=0.116 Sum_probs=67.0
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCC----CEEEEEcCCch--hHHHHhhcCcEEc-CHHHHhccCCEEEecCCCcccCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALS----AQVWIIEIDPI--CALQAAMEGFLVV-TMEYAKKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~G----a~ViV~d~dp~--r~~~A~~~G~~v~-~~~e~l~~aDvvi~atG~~~vi~ 880 (1027)
..-.+|+|||+|.+|..+|..+...| .+|+++++++. +.......|+.+. +..+++..+|+||.|+.... +.
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~~~~-~~ 98 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKPHI-IP 98 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSCGGG-HH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeCHHH-HH
Confidence 34457999999999999999999999 68999999885 5555556688765 67788889999999987432 22
Q ss_pred H---HHHhcCCCCeEEEEec
Q psy15208 881 H---DHMRDMKDQAIVCNIG 897 (1027)
Q Consensus 881 ~---~~~~~mk~gailvNvG 897 (1027)
. +....++++.+++++.
T Consensus 99 ~vl~~l~~~l~~~~ivvs~s 118 (322)
T 2izz_A 99 FILDEIGADIEDRHIVVSCA 118 (322)
T ss_dssp HHHHHHGGGCCTTCEEEECC
T ss_pred HHHHHHHhhcCCCCEEEEeC
Confidence 1 2223577889999874
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0024 Score=74.52 Aligned_cols=89 Identities=24% Similarity=0.220 Sum_probs=68.2
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-------------------cC-cE-EcCHHHHhccCCEE
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-------------------EG-FL-VVTMEYAKKYGDIF 869 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-------------------~G-~~-v~~~~e~l~~aDvv 869 (1027)
.+|+|+|.|.+|..+|..+...|.+|+++|+++.+...... .| +. ..++++++..+|+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 48999999999999999999999999999999876544322 12 33 34678889999999
Q ss_pred EecCCCc----------ccC--cHHHHhcCCCCeEEEEecCC
Q psy15208 870 VTCTGNY----------HVI--THDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 870 i~atG~~----------~vi--~~~~~~~mk~gailvNvG~~ 899 (1027)
|.|++++ .+. -....+.++++.++++.+..
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv 124 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTV 124 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCC
T ss_pred EEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeC
Confidence 9998876 211 12234568999999998754
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0017 Score=71.03 Aligned_cols=87 Identities=14% Similarity=0.105 Sum_probs=63.9
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-------------CHHHHhc---cCCEEEecCC
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-------------TMEYAKK---YGDIFVTCTG 874 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-------------~~~e~l~---~aDvvi~atG 874 (1027)
.+|+|+|+|.+|..+|..+...|.+|+++++++.+.......|..+. +.+++.. .+|+||.|+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 37999999999999999999999999999999877666555565432 3334444 8999999997
Q ss_pred CcccCc--HHHHhcCCCCeEEEEec
Q psy15208 875 NYHVIT--HDHMRDMKDQAIVCNIG 897 (1027)
Q Consensus 875 ~~~vi~--~~~~~~mk~gailvNvG 897 (1027)
...+-. .+....++++.+++++.
T Consensus 84 ~~~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 84 AQQLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp HHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred cccHHHHHHHHHHhcCCCCEEEEec
Confidence 643111 12234577889988874
|
| >2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0013 Score=77.27 Aligned_cols=89 Identities=12% Similarity=0.010 Sum_probs=69.0
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc----CcEE-cCHHHHhcc---CCEEEecCCCcccCc--
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME----GFLV-VTMEYAKKY---GDIFVTCTGNYHVIT-- 880 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~----G~~v-~~~~e~l~~---aDvvi~atG~~~vi~-- 880 (1027)
.+|+|||+|.+|..+|..+...|.+|+++|+++.+....... |+.. .++++++.. +|+|+.++.....+.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 479999999999999999999999999999998776654433 6654 467787765 999999987642122
Q ss_pred -HHHHhcCCCCeEEEEecCC
Q psy15208 881 -HDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 881 -~~~~~~mk~gailvNvG~~ 899 (1027)
.+....+++|.++++++-.
T Consensus 86 l~~l~~~l~~g~iiId~s~~ 105 (474)
T 2iz1_A 86 IKSLLPLLDIGDILIDGGNT 105 (474)
T ss_dssp HHHHGGGCCTTCEEEECSCC
T ss_pred HHHHHhhCCCCCEEEECCCC
Confidence 2334568899999998765
|
| >3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0021 Score=75.03 Aligned_cols=87 Identities=14% Similarity=0.085 Sum_probs=63.2
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHH--------HHhhcC-------------cE-EcCHHHHhccCCE
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICAL--------QAAMEG-------------FL-VVTMEYAKKYGDI 868 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~--------~A~~~G-------------~~-v~~~~e~l~~aDv 868 (1027)
++|+|||.|.+|.++|+.++..|.+|+++|+++.+.. .+...| +. ..++ +++++||+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl-~al~~aDl 133 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDF-HKLSNCDL 133 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCG-GGCTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCH-HHHccCCE
Confidence 7899999999999999999999999999999987432 122233 22 2345 47889999
Q ss_pred EEecCCCcccC----cHHHHhcCCCCeEEE-EecC
Q psy15208 869 FVTCTGNYHVI----THDHMRDMKDQAIVC-NIGH 898 (1027)
Q Consensus 869 vi~atG~~~vi----~~~~~~~mk~gailv-NvG~ 898 (1027)
||+|.....-+ -.+..+.++++++|+ |++.
T Consensus 134 VIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSs 168 (460)
T 3k6j_A 134 IVESVIEDMKLKKELFANLENICKSTCIFGTNTSS 168 (460)
T ss_dssp EEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS
T ss_pred EEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCC
Confidence 99998753212 223345689999996 4544
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00087 Score=69.97 Aligned_cols=77 Identities=17% Similarity=0.243 Sum_probs=55.4
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcc---cCc
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYH---VIT 880 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~---vi~ 880 (1027)
.|..+.+++|+|+|+|.+|..+|..+...|.+|+++|+++. ++.++|+|+.|+.... ++.
T Consensus 13 ~~~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-----------------~~~~aD~vi~av~~~~~~~v~~ 75 (209)
T 2raf_A 13 ENLYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------------ATTLGEIVIMAVPYPALAALAK 75 (209)
T ss_dssp -------CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-----------------CSSCCSEEEECSCHHHHHHHHH
T ss_pred cccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-----------------HhccCCEEEEcCCcHHHHHHHH
Confidence 36678899999999999999999999999999999988764 5678999999987432 111
Q ss_pred HHHHhcCCCCeEEEEecCC
Q psy15208 881 HDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~ 899 (1027)
+....++ ++++++++..
T Consensus 76 -~l~~~~~-~~~vi~~~~g 92 (209)
T 2raf_A 76 -QYATQLK-GKIVVDITNP 92 (209)
T ss_dssp -HTHHHHT-TSEEEECCCC
T ss_pred -HHHHhcC-CCEEEEECCC
Confidence 1123467 8999988663
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.002 Score=74.79 Aligned_cols=88 Identities=17% Similarity=0.172 Sum_probs=66.2
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-------------------cC-cE-EcCHHHHhccCCEEE
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-------------------EG-FL-VVTMEYAKKYGDIFV 870 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-------------------~G-~~-v~~~~e~l~~aDvvi 870 (1027)
+|+|+|.|.+|..+|..+...|.+|+++|+++.+...... .| +. ..+.++++..+|+||
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvvi 81 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVSF 81 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEEE
Confidence 6899999999999999999999999999999876654333 23 33 345777888999999
Q ss_pred ecCCCccc---------Cc---HHHHhcCCC---CeEEEEecCC
Q psy15208 871 TCTGNYHV---------IT---HDHMRDMKD---QAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~v---------i~---~~~~~~mk~---gailvNvG~~ 899 (1027)
.|++++.- +. .+..+.|++ +.++++.+..
T Consensus 82 iaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv 125 (436)
T 1mv8_A 82 ICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTV 125 (436)
T ss_dssp ECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCC
T ss_pred EEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCc
Confidence 99876541 11 122345788 8999987544
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.005 Score=66.08 Aligned_cols=41 Identities=20% Similarity=0.231 Sum_probs=36.2
Q ss_pred cccCCEEEEEcCC---hhHHHHHHHHHhCCCEEEEEcCCchhHH
Q psy15208 807 MIAGKIAVIIGYG---DVGKGSAQAMRALSAQVWIIEIDPICAL 847 (1027)
Q Consensus 807 ~l~Gk~VvViG~G---~IG~~vA~~a~~~Ga~ViV~d~dp~r~~ 847 (1027)
.|.||+++|.|.+ .||+++|+.|...|++|+++++++....
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~ 46 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRK 46 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 4799999999974 5999999999999999999999875543
|
| >2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0058 Score=70.30 Aligned_cols=97 Identities=20% Similarity=0.166 Sum_probs=67.6
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHh-CCCEEE-EEcC----------CchhHHHHhhc-C-------cEEcCHHHHh
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRA-LSAQVW-IIEI----------DPICALQAAME-G-------FLVVTMEYAK 863 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~-~Ga~Vi-V~d~----------dp~r~~~A~~~-G-------~~v~~~~e~l 863 (1027)
.+..+.|++|+|.|+|.+|+.+|+.|.. .|++|+ |.|. |+..+.+.... | .+.++.++.+
T Consensus 203 ~g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil 282 (415)
T 2tmg_A 203 LGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELL 282 (415)
T ss_dssp TTCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHT
T ss_pred cCCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhh
Confidence 4667999999999999999999999999 999977 6676 44333332221 2 3455666665
Q ss_pred c-cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccc
Q psy15208 864 K-YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIE 904 (1027)
Q Consensus 864 ~-~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid 904 (1027)
. .+||++.|+ ..+.++.+....++ +.+|--|- +..+.
T Consensus 283 ~~~~DIliP~A-~~n~i~~~~a~~l~--ak~V~EgA-N~p~t 320 (415)
T 2tmg_A 283 ELDVDILVPAA-LEGAIHAGNAERIK--AKAVVEGA-NGPTT 320 (415)
T ss_dssp TCSCSEEEECS-STTSBCHHHHTTCC--CSEEECCS-SSCBC
T ss_pred cCCCcEEEecC-CcCccCcccHHHcC--CeEEEeCC-CcccC
Confidence 3 799999886 34578888888884 44443332 44443
|
| >1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.075 Score=58.56 Aligned_cols=131 Identities=16% Similarity=0.149 Sum_probs=91.4
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcC---ChhHHHHHHHHHhC-CCEEEEEcCCc
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGY---GDVGKGSAQAMRAL-SAQVWIIEIDP 843 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~---G~IG~~vA~~a~~~-Ga~ViV~d~dp 843 (1027)
..+||||--++..-+. -|.+.|- +.+..+ .+.|.+|+++|= +++.+..+..+..+ |++|.++-+..
T Consensus 115 ~~vPVINaG~g~~~HP-------tQ~LaDl~Ti~e~~g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~ 186 (299)
T 1pg5_A 115 SDIPVINAGDGKHEHP-------TQAVIDIYTINKHFN-TIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQL 186 (299)
T ss_dssp CSSCEEEEEETTTBCH-------HHHHHHHHHHHHHHS-CSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGG
T ss_pred CCCCEEeCCCCCCcCc-------HHHHHHHHHHHHHhC-CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCch
Confidence 5789999855433332 2444433 333334 478999999998 48999999999999 99999983322
Q ss_pred hh--HHHHhhcCcE---EcCHHHHhccCCEEEecCCC---------------cccCcHHHHhcCCCCeEEEEecCCCccc
Q psy15208 844 IC--ALQAAMEGFL---VVTMEYAKKYGDIFVTCTGN---------------YHVITHDHMRDMKDQAIVCNIGHFDNEI 903 (1027)
Q Consensus 844 ~r--~~~A~~~G~~---v~~~~e~l~~aDvvi~atG~---------------~~vi~~~~~~~mk~gailvNvG~~d~ei 903 (1027)
.. ...+...|.. ..+++++++++|||++..-. .--++.+.++.+|+++++...+.-..||
T Consensus 187 ~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lPrg~EI 266 (299)
T 1pg5_A 187 LRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPLPRVNEI 266 (299)
T ss_dssp GCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCSCCSSSB
T ss_pred hcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccccccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCCCCCCcc
Confidence 21 1113345643 35799999999999874321 2357888889999999999988877787
Q ss_pred chhhh
Q psy15208 904 EVEKL 908 (1027)
Q Consensus 904 d~~~l 908 (1027)
+-+.+
T Consensus 267 ~~eV~ 271 (299)
T 1pg5_A 267 DRKVD 271 (299)
T ss_dssp CGGGG
T ss_pred CHHHh
Confidence 76644
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0012 Score=71.99 Aligned_cols=93 Identities=19% Similarity=0.127 Sum_probs=63.8
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHh-hcCc-------EEcCHH---HH-------hccCC
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAA-MEGF-------LVVTME---YA-------KKYGD 867 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-~~G~-------~v~~~~---e~-------l~~aD 867 (1027)
.|.||+++|.|.+. ||+++|+.+...||+|+++++++.++.++. ..|- ++.+.+ ++ +...|
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 105 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID 105 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 38999999999988 999999999999999999999987665432 2232 122211 11 12468
Q ss_pred EEEecCCCcc------------------------cCcHHHHhcCCCCeEEEEecCC
Q psy15208 868 IFVTCTGNYH------------------------VITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 868 vvi~atG~~~------------------------vi~~~~~~~mk~gailvNvG~~ 899 (1027)
++|++.|... .+.+..+..|++++.+||++..
T Consensus 106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~ 161 (273)
T 4fgs_A 106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGST 161 (273)
T ss_dssp EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeeh
Confidence 9888765310 1223336677778888888764
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0064 Score=66.41 Aligned_cols=103 Identities=19% Similarity=0.107 Sum_probs=66.3
Q ss_pred hhHHHHHhhhcCccccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-----cCc-----EEcC---H
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-----EGF-----LVVT---M 859 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-----~G~-----~v~~---~ 859 (1027)
.+++..+.+..+..+.||+|+|+| .|.||+.++..+...|++|+++++++.++.+... .++ ++.+ +
T Consensus 103 ~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~ 182 (287)
T 1lu9_A 103 AAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASR 182 (287)
T ss_dssp HHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHH
T ss_pred HHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHH
Confidence 455666554314457899999999 9999999999999999999999998766543211 122 2222 3
Q ss_pred HHHhccCCEEEecCCCc-ccCcHHHHhcCCCCeEEEEe
Q psy15208 860 EYAKKYGDIFVTCTGNY-HVITHDHMRDMKDQAIVCNI 896 (1027)
Q Consensus 860 ~e~l~~aDvvi~atG~~-~vi~~~~~~~mk~gailvNv 896 (1027)
.+++.++|++|.++|.. .......+..+.+...+.++
T Consensus 183 ~~~~~~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dv 220 (287)
T 1lu9_A 183 AEAVKGAHFVFTAGAIGLELLPQAAWQNESSIEIVADY 220 (287)
T ss_dssp HHHTTTCSEEEECCCTTCCSBCHHHHTTCTTCCEEEEC
T ss_pred HHHHHhCCEEEECCCccccCCChhHcCchHHHHHHHHh
Confidence 45567789999988632 11222234434444444443
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00047 Score=78.52 Aligned_cols=90 Identities=16% Similarity=0.060 Sum_probs=68.6
Q ss_pred ccCCEEEEE--cCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc------cCCEEEecC
Q psy15208 808 IAGKIAVII--GYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK------YGDIFVTCT 873 (1027)
Q Consensus 808 l~Gk~VvVi--G~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~------~aDvvi~at 873 (1027)
..|++|+|+ |.|.+|+.+++.++.+|++|++++.++.+...+...|++ +.+ ..+.+. ..|++++++
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~v~~~t~~~g~d~v~d~~ 248 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEALVSTGATIAFDAT 248 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHHHHHHHHHHHCCCEEEESC
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHHHHHHHhcCCCceEEEECC
Confidence 589999999 899999999999999999999999999999889999986 332 222222 489999999
Q ss_pred CCcccCcHHHHhcC-----CCCeEEEEecC
Q psy15208 874 GNYHVITHDHMRDM-----KDQAIVCNIGH 898 (1027)
Q Consensus 874 G~~~vi~~~~~~~m-----k~gailvNvG~ 898 (1027)
|....+. ..++.| ++++.++.+|.
T Consensus 249 g~~~~~~-~~~~~l~~~~~r~~G~~~~~G~ 277 (379)
T 3iup_A 249 GGGKLGG-QILTCMEAALNKSAREYSRYGS 277 (379)
T ss_dssp EEESHHH-HHHHHHHHHHHTTCCSCCTTCC
T ss_pred CchhhHH-HHHHhcchhhhccccceeeccc
Confidence 9865433 335555 56655555544
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0091 Score=64.41 Aligned_cols=136 Identities=15% Similarity=0.147 Sum_probs=80.9
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHH---------------HHHHhCCcEE
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLV---------------RVMLSLGYIS 68 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la---------------~~La~~Gy~V 68 (1027)
...+.+....+ .+..+++..... ...+|++++++|++.- ++..-..+..+. -.+. +-..+
T Consensus 21 sGy~~v~~~~~~~lFywf~es~~~--~~~~Pl~lwlnGGPGc-SS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~-~~anv 96 (255)
T 1whs_A 21 SGYITVDEGAGRSLFYLLQEAPED--AQPAPLVLWLNGGPGC-SSVAYGASEELGAFRVKPRGAGLVLNEYRWN-KVANV 96 (255)
T ss_dssp EEEEEEETTTTEEEEEEEECCCGG--GCSCCEEEEECCTTTB-CTTTTHHHHTSSSEEECGGGCCEEECTTCGG-GTSEE
T ss_pred EEEEECCCCCCcEEEEEEEEecCC--CCCCCEEEEECCCCch-HHHHHHHHhccCCeEecCCCCeeeeCccccc-ccCCE
Confidence 34566765445 666666655432 2468999999998642 222100010000 0011 13689
Q ss_pred EEEcC-CCCCCCCCCC------CCccchHHHHHHHHHHHHHhC---CCCcEEEEEechhHHHHHHHHHhcCC----cCCc
Q psy15208 69 IRMNF-RGVGASSGTY------DSGNGETDDMEILLRYIQKKY---PYLPIILAGFSFGTFVQAKLQKRLDK----EISI 134 (1027)
Q Consensus 69 la~Dl-rGhG~S~g~~------~~~~~~~~Dv~avl~~L~~~~---~~~pviLVGhSmGG~vAl~~A~~~p~----~~~V 134 (1027)
+-+|. .|.|.|.... .+....+.|+..+++.+..++ ...+++|.|+|+||..+..+|...-+ ...+
T Consensus 97 lfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inL 176 (255)
T 1whs_A 97 LFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINL 176 (255)
T ss_dssp EEECCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEE
T ss_pred EEEecCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCccccc
Confidence 99997 4999985432 122344556655555555544 34689999999999998887765321 1357
Q ss_pred cEEEEEccCC
Q psy15208 135 KILILISVAV 144 (1027)
Q Consensus 135 ~gLVli~p~~ 144 (1027)
+|+++.+|..
T Consensus 177 kGi~ign~~~ 186 (255)
T 1whs_A 177 KGFMVGNGLI 186 (255)
T ss_dssp EEEEEEEECC
T ss_pred ceEEecCCcc
Confidence 8888777655
|
| >1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0012 Score=77.34 Aligned_cols=91 Identities=15% Similarity=0.168 Sum_probs=64.7
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh--hcCcEEcC---HHHHhccCCEEEecCCCcccCc
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA--MEGFLVVT---MEYAKKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~--~~G~~v~~---~~e~l~~aDvvi~atG~~~vi~ 880 (1027)
+.+.|++|+|+|.|.+|...++.|...|++|+|++.+.....+.. ..++++.. .++.+..+|+||.+||.+. ++
T Consensus 8 ~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at~~~~-~n 86 (457)
T 1pjq_A 8 CQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDDT-VN 86 (457)
T ss_dssp ECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCHH-HH
T ss_pred EECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcCCCHH-HH
Confidence 357899999999999999999999999999999987643333322 23454421 2345668999999998874 45
Q ss_pred HHHHhcCCCCeEEEEec
Q psy15208 881 HDHMRDMKDQAIVCNIG 897 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG 897 (1027)
.......+..++.+|+-
T Consensus 87 ~~i~~~a~~~~i~vn~~ 103 (457)
T 1pjq_A 87 QRVSDAAESRRIFCNVV 103 (457)
T ss_dssp HHHHHHHHHTTCEEEET
T ss_pred HHHHHHHHHcCCEEEEC
Confidence 55455555555666653
|
| >2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.002 Score=75.90 Aligned_cols=89 Identities=10% Similarity=-0.016 Sum_probs=69.1
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-----cCcEE-cCHHHHhc---cCCEEEecCCCcccCc-
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-----EGFLV-VTMEYAKK---YGDIFVTCTGNYHVIT- 880 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-----~G~~v-~~~~e~l~---~aDvvi~atG~~~vi~- 880 (1027)
.+|+|||+|.+|..+|..+...|.+|+++|+++.+...... .|+.. .++++++. .+|+||.++.....+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 36999999999999999999999999999999877666554 56654 46777764 8999999987642122
Q ss_pred --HHHHhcCCCCeEEEEecCC
Q psy15208 881 --HDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 881 --~~~~~~mk~gailvNvG~~ 899 (1027)
.+....+++|.++++++-.
T Consensus 83 vl~~l~~~l~~g~iII~~s~~ 103 (482)
T 2pgd_A 83 FIEKLVPLLDIGDIIIDGGNS 103 (482)
T ss_dssp HHHHHHHHCCTTCEEEECSCC
T ss_pred HHHHHHhhcCCCCEEEECCCC
Confidence 2334568899999998765
|
| >4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.095 Score=57.97 Aligned_cols=131 Identities=18% Similarity=0.097 Sum_probs=88.0
Q ss_pred CCccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchh
Q psy15208 769 KLSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPIC 845 (1027)
Q Consensus 769 ~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r 845 (1027)
...+||||-= +. ..+ .-|.+.|- +.+..+ .+.|.+|+++|=+. +.+..+..+..+|++|.++-+....
T Consensus 120 ~~~vPVINag-~~------~~H-PtQaLaDl~Ti~e~~g-~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~ 190 (309)
T 4f2g_A 120 NSRVPVINGL-TN------EYH-PCQVLADIFTYYEHRG-PIRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYA 190 (309)
T ss_dssp TCSSCEEEEE-CS------SCC-HHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGC
T ss_pred hCCCCEEECC-CC------ccC-cHHHHHHHHHHHHHhC-CCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccC
Confidence 3679999864 21 112 23555543 334334 48999999999864 8888999999999999988332111
Q ss_pred ---HHHHhhcC--cE-EcCHHHHhccCCEEEecC----CC------------cccCcHHHHhcCCCCeEEEEecCC--Cc
Q psy15208 846 ---ALQAAMEG--FL-VVTMEYAKKYGDIFVTCT----GN------------YHVITHDHMRDMKDQAIVCNIGHF--DN 901 (1027)
Q Consensus 846 ---~~~A~~~G--~~-v~~~~e~l~~aDvvi~at----G~------------~~vi~~~~~~~mk~gailvNvG~~--d~ 901 (1027)
...+...| +. ..+++++++++|||++.+ |. .--++.+.++.+|+++++.-.+.. .+
T Consensus 191 ~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~ 270 (309)
T 4f2g_A 191 LDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGFEAENEARKRAFADWCVDEEMMSHANSDALFMHCLPAHRGE 270 (309)
T ss_dssp CCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC------------CCSGGGGCBCHHHHTTSCTTCEEEECSSCCBTT
T ss_pred CCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcchhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCCCCCCCc
Confidence 11122233 33 357999999999998744 21 235788889999999999999885 56
Q ss_pred ccchhhh
Q psy15208 902 EIEVEKL 908 (1027)
Q Consensus 902 eid~~~l 908 (1027)
||+-+.+
T Consensus 271 EI~~eV~ 277 (309)
T 4f2g_A 271 EVTAGVI 277 (309)
T ss_dssp TBCHHHH
T ss_pred eecHHHh
Confidence 7776533
|
| >1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0024 Score=74.83 Aligned_cols=85 Identities=18% Similarity=0.184 Sum_probs=61.6
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-----------cC-----------cEE-cCHHHHhccC
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-----------EG-----------FLV-VTMEYAKKYG 866 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-----------~G-----------~~v-~~~~e~l~~a 866 (1027)
=++|+|+|+|.+|.++|..+...|.+|+++|+++.+...+.. .| ..+ .++ +++.++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 368999999999999999999999999999999865544321 11 122 344 567899
Q ss_pred CEEEecCCCcccCcH----HHHhcCCCCeEEEE
Q psy15208 867 DIFVTCTGNYHVITH----DHMRDMKDQAIVCN 895 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~----~~~~~mk~gailvN 895 (1027)
|+||+|+...--+.. +.-+.++++++++.
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 999999975311112 22345889999886
|
| >3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0035 Score=69.83 Aligned_cols=91 Identities=16% Similarity=0.163 Sum_probs=63.9
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh-----------hcC--------------cE-EcCHHHH
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA-----------MEG--------------FL-VVTMEYA 862 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~-----------~~G--------------~~-v~~~~e~ 862 (1027)
.-++|+|+|+|.+|.++|..+...|.+|+++|++|.....+. ..| +. ..+++++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 357899999999999999999999999999999985433211 111 11 3457788
Q ss_pred hccCCEEEecCCCcccCcHHHH----hcCCCCeEEEEecCC
Q psy15208 863 KKYGDIFVTCTGNYHVITHDHM----RDMKDQAIVCNIGHF 899 (1027)
Q Consensus 863 l~~aDvvi~atG~~~vi~~~~~----~~mk~gailvNvG~~ 899 (1027)
+..+|+|++|....--+..+.| +.++++++|+.-.+.
T Consensus 85 ~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs 125 (319)
T 3ado_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred hccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh
Confidence 9999999999754322333333 346889998655443
|
| >4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0032 Score=72.86 Aligned_cols=87 Identities=14% Similarity=0.127 Sum_probs=62.0
Q ss_pred hcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEc-C-------Cch---hHH---------------HHhhcCcEE
Q psy15208 803 ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIE-I-------DPI---CAL---------------QAAMEGFLV 856 (1027)
Q Consensus 803 ~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d-~-------dp~---r~~---------------~A~~~G~~v 856 (1027)
..+..+.|++|+|-|+|.+|..+|+.|...||+|++++ . +-+ ... .+...|.+.
T Consensus 228 ~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~ 307 (450)
T 4fcc_A 228 RHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVY 307 (450)
T ss_dssp HTTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEE
T ss_pred HcCCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEE
Confidence 34667999999999999999999999999999987653 2 111 111 122345565
Q ss_pred cCHHHHhc-cCCEEEecCCCcccCcHHHHhcCCCC
Q psy15208 857 VTMEYAKK-YGDIFVTCTGNYHVITHDHMRDMKDQ 890 (1027)
Q Consensus 857 ~~~~e~l~-~aDvvi~atG~~~vi~~~~~~~mk~g 890 (1027)
++.++.+. .|||++-|. ..+.|+.+..+.|+.+
T Consensus 308 ~~~~~i~~~~~DI~iPcA-l~~~I~~~~a~~L~a~ 341 (450)
T 4fcc_A 308 LEGQQPWSVPVDIALPCA-TQNELDVDAAHQLIAN 341 (450)
T ss_dssp EETCCGGGSCCSEEEECS-CTTCBCHHHHHHHHHT
T ss_pred ecCcccccCCccEEeecc-ccccccHHHHHHHHhc
Confidence 55555543 699999775 3356999888888764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1027 | ||||
| d1v8ba2 | 313 | c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystei | 1e-84 | |
| d1v8ba2 | 313 | c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystei | 1e-36 | |
| d1v8ba1 | 163 | c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolas | 6e-78 | |
| d1li4a2 | 267 | c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystei | 3e-75 | |
| d1li4a2 | 267 | c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystei | 2e-34 | |
| d1mxaa3 | 152 | d.130.1.1 (A:232-383) S-adenosylmethionine synthet | 5e-72 | |
| d2p02a3 | 144 | d.130.1.1 (A:274-417) S-adenosylmethionine synthet | 3e-70 | |
| d1li4a1 | 163 | c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolas | 4e-67 | |
| d1mxaa2 | 124 | d.130.1.1 (A:108-231) S-adenosylmethionine synthet | 2e-50 | |
| d2p02a2 | 126 | d.130.1.1 (A:148-273) S-adenosylmethionine synthet | 2e-49 | |
| d2p02a1 | 110 | d.130.1.1 (A:38-147) S-adenosylmethionine syntheta | 1e-36 | |
| d1mxaa1 | 102 | d.130.1.1 (A:1-102) S-adenosylmethionine synthetas | 2e-33 | |
| d2i3da1 | 218 | c.69.1.36 (A:2-219) Hypothetical protein Atu1826 { | 3e-29 | |
| d2fuka1 | 218 | c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas ca | 4e-28 | |
| d1c1da1 | 201 | c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {R | 3e-05 | |
| d1uxoa_ | 186 | c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus | 8e-05 | |
| d1id1a_ | 153 | c.2.1.9 (A:) Rck domain from putative potassium ch | 1e-04 | |
| d2fy8a1 | 129 | c.2.1.9 (A:116-244) Potassium channel-related prot | 2e-04 | |
| d2hmva1 | 134 | c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [T | 4e-04 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 4e-04 | |
| d1bgva1 | 255 | c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clost | 0.002 | |
| d1pjca1 | 168 | c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phorm | 0.003 | |
| d1pjqa1 | 113 | c.2.1.11 (A:1-113) Siroheme synthase CysG, domain | 0.004 |
| >d1v8ba2 c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Score = 273 bits (700), Expect = 1e-84
Identities = 110/272 (40%), Positives = 169/272 (62%), Gaps = 16/272 (5%)
Query: 564 DFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIE 623
+ DI+L+ +G+ ++EI+E EM L+ IREE+ K +PLK A+I+G +HMT++ A+LIE
Sbjct: 2 KSKVKDISLAPFGKMQMEISENEMPGLMRIREEYGKDQPLKNAKITGCLHMTVECALLIE 61
Query: 624 TLKCLGAEVRWSSCNIYSTQDHAAAAI-ASKGIPVFAFKGESISDYWEFNHRIFDWPGNS 682
TL+ LGA++RW SCNIYST D+AAAA+ + + VFA+K E++ +YW W
Sbjct: 62 TLQKLGAQIRWCSCNIYSTADYAAAAVSTLENVTVFAWKNETLEEYWWCVESALTWGDGD 121
Query: 683 NTEQANMILDDGGDATFLLHLGAQAEN---NISILSNPC---SEEEVCLFKSIKNKLKID 736
+ +MI+DDGGDAT L+H G + E +IL +P +EEE C +KN + +
Sbjct: 122 DN-GPDMIVDDGGDATLLVHKGVEYEKLYEEKNILPDPEKAKNEEERCFLTLLKNSILKN 180
Query: 737 SKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDN------LY 790
K +++ K+I GV+EETTTGV RL++M K+ +L F AINVND+VTK K+D+
Sbjct: 181 PKKWTNIAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYDHPAFVMSFS 240
Query: 791 GCRESL--IDGIKRATDVMIAGKIAVIIGYGD 820
C ++ +D + K+ ++ + D
Sbjct: 241 FCNQTFAQLDLWQNKDTNKYENKVYLLPKHLD 272
|
| >d1v8ba2 c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Score = 138 bits (349), Expect = 1e-36
Identities = 44/84 (52%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 946 TGHPSYVMSSSFANQTLAQIELFNN--TSNYPIGIYTLPKILDEKVARLQLKKLNVQLSK 1003
HP++VMS SF NQT AQ++L+ N T+ Y +Y LPK LDEKVA LKKLN L++
Sbjct: 230 YDHPAFVMSFSFCNQTFAQLDLWQNKDTNKYENKVYLLPKHLDEKVALYHLKKLNASLTE 289
Query: 1004 LTDQQAKYIGVSKNGPYKLDNYRY 1027
L D Q +++GV+K+GP+K + YRY
Sbjct: 290 LDDNQCQFLGVNKSGPFKSNEYRY 313
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Length = 163 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Score = 249 bits (638), Expect = 6e-78
Identities = 99/163 (60%), Positives = 122/163 (74%), Gaps = 3/163 (1%)
Query: 788 NLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICAL 847
N+YGCR SL DG+ RATD +I+GKI VI GYGDVGKG A +M+ L A+V+I EIDPICA+
Sbjct: 1 NVYGCRHSLPDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAI 60
Query: 848 QAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEK 907
QA MEGF VVT++ GD F+TCTGN VI +H+ MK+ A+V NIGHFD+EI+V +
Sbjct: 61 QAVMEGFNVVTLDEIVDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNE 120
Query: 908 LKKY---KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTG 947
L Y EN+KPQVD I P+G KII+LA GRL+NLGC TG
Sbjct: 121 LFNYKGIHIENVKPQVDRITLPNGNKIIVLARGRLLNLGCATG 163
|
| >d1li4a2 c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Score = 246 bits (629), Expect = 3e-75
Identities = 115/293 (39%), Positives = 155/293 (52%), Gaps = 40/293 (13%)
Query: 561 NSADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAV 620
+ + +ADI L+ WGRK ++IAE EM L+ +RE + SKPLKGARI+G +HMT++TAV
Sbjct: 1 DKLPYKVADIGLAAWGRKALDIAENEMPGLMRMRERYSASKPLKGARIAGCLHMTVETAV 60
Query: 621 LIETLKCLGAEVRWSSCNIYSTQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPG 680
LIETL LGAEV+WSSCNI+STQDHAAAAIA GIPV+A+KGE+ +Y + +
Sbjct: 61 LIETLVTLGAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYF-- 118
Query: 681 NSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEEEVCLFKSIKNKLKIDSKWY 740
NMILDDGGD T L+H Y
Sbjct: 119 --KDGPLNMILDDGGDLTNLIH-----------------------------------TKY 141
Query: 741 SSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGI 800
L I+G++EETTTGV+ L +M G L PAINVNDSVTKSKF + S + +
Sbjct: 142 PQLLPGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKFHPSFVMSNSFTNQV 201
Query: 801 KRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEG 853
++ + + K A ++ +++ + QA G
Sbjct: 202 MAQIELWTHPDKYPVGVHFLPKKLDEAVAEAHLGKLN-VKLTKLTEKQAQYLG 253
|
| >d1li4a2 c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (330), Expect = 2e-34
Identities = 47/80 (58%), Positives = 65/80 (81%)
Query: 948 HPSYVMSSSFANQTLAQIELFNNTSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQ 1007
HPS+VMS+SF NQ +AQIEL+ + YP+G++ LPK LDE VA L KLNV+L+KLT++
Sbjct: 188 HPSFVMSNSFTNQVMAQIELWTHPDKYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEK 247
Query: 1008 QAKYIGVSKNGPYKLDNYRY 1027
QA+Y+G+S +GP+K D+YRY
Sbjct: 248 QAQYLGMSCDGPFKPDHYRY 267
|
| >d1mxaa3 d.130.1.1 (A:232-383) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]} Length = 152 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: S-adenosylmethionine synthetase superfamily: S-adenosylmethionine synthetase family: S-adenosylmethionine synthetase domain: S-adenosylmethionine synthetase species: Escherichia coli [TaxId: 562]
Score = 233 bits (595), Expect = 5e-72
Identities = 107/152 (70%), Positives = 129/152 (84%), Gaps = 2/152 (1%)
Query: 413 IGGPKGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLA 472
IGGP GDCGLTGRKIIVDTYGG A HGGGAFSGKDPSK+DRSAAY RY+AKNIVAA LA
Sbjct: 1 IGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLA 60
Query: 473 KRCQIQISYAIGVAKPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIY 532
RC+IQ+SYAIGVA+PTSIMV +FG+ K+ E+LT+LV++ FDLRP +I+ML+LL PIY
Sbjct: 61 DRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIY 120
Query: 533 KKTSVYGHFGRKEPEFTWELTDKAEVLKNSAD 564
K+T+ YGHFGR F WE TDKA++L+++A
Sbjct: 121 KETAAYGHFGR--EHFPWEKTDKAQLLRDAAG 150
|
| >d2p02a3 d.130.1.1 (A:274-417) S-adenosylmethionine synthetase {Human (Homo sapiens), isoform type-2 [TaxId: 9606]} Length = 144 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: S-adenosylmethionine synthetase superfamily: S-adenosylmethionine synthetase family: S-adenosylmethionine synthetase domain: S-adenosylmethionine synthetase species: Human (Homo sapiens), isoform type-2 [TaxId: 9606]
Score = 227 bits (581), Expect = 3e-70
Identities = 81/145 (55%), Positives = 109/145 (75%), Gaps = 2/145 (1%)
Query: 413 IGGPKGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLA 472
IGGP+GD GLTGRKIIVDTYGG HGGGAFSGKD +K+DRSAAY R++AK++V L
Sbjct: 1 IGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLC 60
Query: 473 KRCQIQISYAIGVAKPTSIMVTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIY 532
+R +Q+SYAIGV+ P SI + +G+ + S+ +L +VKK+FDLRP I++ L+L +PIY
Sbjct: 61 RRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKKPIY 120
Query: 533 KKTSVYGHFGRKEPEFTWELTDKAE 557
++T+ YGHFGR F WE+ K +
Sbjct: 121 QRTAAYGHFGR--DSFPWEVPKKLK 143
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 163 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Score = 220 bits (561), Expect = 4e-67
Identities = 108/163 (66%), Positives = 124/163 (76%), Gaps = 2/163 (1%)
Query: 787 DNLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICA 846
DNLYGCRESLIDGIKRATDVMIAGK+AV+ GYGDVGKG AQA+R A+V I EIDPI A
Sbjct: 1 DNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINA 60
Query: 847 LQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVE 906
LQAAMEG+ V TM+ A + G+IFVT TG +I H MKD AIVCNIGHFD EI+V+
Sbjct: 61 LQAAMEGYEVTTMDEACQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVK 120
Query: 907 KLKKY--KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTG 947
L + + NIKPQVD +G++IILLAEGRLVNLGC G
Sbjct: 121 WLNENAVEKVNIKPQVDRYRLKNGRRIILLAEGRLVNLGCAMG 163
|
| >d1mxaa2 d.130.1.1 (A:108-231) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: S-adenosylmethionine synthetase superfamily: S-adenosylmethionine synthetase family: S-adenosylmethionine synthetase domain: S-adenosylmethionine synthetase species: Escherichia coli [TaxId: 562]
Score = 171 bits (435), Expect = 2e-50
Identities = 77/119 (64%), Positives = 96/119 (80%), Gaps = 1/119 (0%)
Query: 295 DQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRY 354
+QGAGDQGLMFGYA +ET LMP+ I Y+H +V+RQ+E+RKNG LPWLRPDAKSQVT +Y
Sbjct: 6 EQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY 65
Query: 355 DNGKPVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFV 412
D+GK V ID +VLSTQH EI +S++EA +EEII+PI+P L T++ INPTGRFV
Sbjct: 66 DDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFV 124
|
| >d2p02a2 d.130.1.1 (A:148-273) S-adenosylmethionine synthetase {Human (Homo sapiens), isoform type-2 [TaxId: 9606]} Length = 126 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: S-adenosylmethionine synthetase superfamily: S-adenosylmethionine synthetase family: S-adenosylmethionine synthetase domain: S-adenosylmethionine synthetase species: Human (Homo sapiens), isoform type-2 [TaxId: 9606]
Score = 168 bits (427), Expect = 2e-49
Identities = 59/123 (47%), Positives = 85/123 (69%), Gaps = 5/123 (4%)
Query: 295 DQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRY 354
D GAGDQGLMFGYA DET E MP I +H + + +ELR+NG LPWLRPD+K+QVT++Y
Sbjct: 4 DIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQY 63
Query: 355 DNGK----PVAIDTIVLSTQHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTG 409
+ P+ + TIV+S QHD E+ +++A E++I+ ++P L ++T Y + P+G
Sbjct: 64 MQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSG 123
Query: 410 RFV 412
RFV
Sbjct: 124 RFV 126
|
| >d2p02a1 d.130.1.1 (A:38-147) S-adenosylmethionine synthetase {Human (Homo sapiens), isoform type-2 [TaxId: 9606]} Length = 110 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: S-adenosylmethionine synthetase superfamily: S-adenosylmethionine synthetase family: S-adenosylmethionine synthetase domain: S-adenosylmethionine synthetase species: Human (Homo sapiens), isoform type-2 [TaxId: 9606]
Score = 131 bits (330), Expect = 1e-36
Identities = 54/102 (52%), Positives = 72/102 (70%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESV EGHPDKI DQISDA+LD +D A+VA ET+ +I+L+GEIT+ A +DY +
Sbjct: 8 ESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKV 67
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDIAQGVNEG 289
VR+ +K IGY++ G DYK+C VL+ +QS DIAQGV+
Sbjct: 68 VREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLD 109
|
| >d1mxaa1 d.130.1.1 (A:1-102) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]} Length = 102 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: S-adenosylmethionine synthetase superfamily: S-adenosylmethionine synthetase family: S-adenosylmethionine synthetase domain: S-adenosylmethionine synthetase species: Escherichia coli [TaxId: 562]
Score = 121 bits (306), Expect = 2e-33
Identities = 55/95 (57%), Positives = 66/95 (69%)
Query: 188 ESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNI 247
ESVSEGHPDKIADQISDA+LD I +D KARVA ET ++++ GEITT A +D I
Sbjct: 8 ESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEI 67
Query: 248 VRKTIKDIGYNNIDYGIDYKSCAVLLIYNKQSLDI 282
R T+++IGY + D G D SCAVL KQS DI
Sbjct: 68 TRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDI 102
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 114 bits (285), Expect = 3e-29
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 13/210 (6%)
Query: 10 INGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISI 69
NG G L K + +I HPHP FGGTM+N++V L + G+ ++
Sbjct: 5 FNGPAGRLEGRYQPSKE----KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTL 60
Query: 70 RMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLP-IILAGFSFGTFVQAKLQKRL 128
R NFR +G S G +D G GE D L ++Q +P +AG+SFG ++ +L R
Sbjct: 61 RFNFRSIGRSQGEFDHGAGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRR 120
Query: 129 DKEISIKILILISVAVKKWLIPEVPKNTIIIHGELDEIIPLKDVFLWANPL------DIP 182
+ + + P + +II+G+ D++ P KDV L I
Sbjct: 121 PEIEGFMSIAPQPNTYDFSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILIT 180
Query: 183 VVVIPES--VSEGHPDKIADQISDAILDEI 210
+P + G D++ + D + +
Sbjct: 181 HRTLPGANHFFNGKVDELMGECEDYLDRRL 210
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Score = 111 bits (277), Expect = 4e-28
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 11/212 (5%)
Query: 1 MISNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRV 60
+ + ++G VG L A++ P ++ ++ HP GG+M NKVV R
Sbjct: 4 FPTESAALTLDGPVGPLDVAVDLPEPDVAVQ-PVTAIVCHPLSTEGGSMHNKVVTMAARA 62
Query: 61 MLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFV 120
+ LG +R NFR VG S+G++D G+GE DD+ + +++ + P + LAGFSFG +V
Sbjct: 63 LRELGITVVRFNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYV 122
Query: 121 QAKLQKRLDKEISIKILILISVAVKKWLIP--EVPKNTIIIHGELDEIIPLKDVFLWANP 178
+ L+ + +LI I+ +W + P ++I G+ DEI+ + V+ W
Sbjct: 123 SLRAAAALEPQ----VLISIAPPAGRWDFSDVQPPAQWLVIQGDADEIVDPQAVYDWLET 178
Query: 179 LDIP--VVVIPES--VSEGHPDKIADQISDAI 206
L+ +V +P++ + + +
Sbjct: 179 LEQQPTLVRMPDTSHFFHRKLIDLRGALQHGV 210
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} Length = 201 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Score = 44.0 bits (103), Expect = 3e-05
Identities = 19/105 (18%), Positives = 32/105 (30%)
Query: 790 YGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA 849
G E++ + + G ++ G G VG A AQ+ + + D A
Sbjct: 7 VGVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHA 66
Query: 850 AMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVC 894
G V +E VIT + R + +
Sbjct: 67 VALGHTAVALEDVLSTPCDVFAPCAMGGVITTEVARTLDCSVVAG 111
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} Length = 186 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Score = 42.4 bits (98), Expect = 8e-05
Identities = 29/176 (16%), Positives = 53/176 (30%), Gaps = 33/176 (18%)
Query: 36 VLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEI 95
V I H + + N L + +L+ G + +N D ++
Sbjct: 4 VYIIHG---YRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPR--------LEDWLDT 52
Query: 96 LLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWLIP----- 150
L Y + L S G + + L ++ +IL+S K
Sbjct: 53 LSLYQHTLHE--NTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQMLDE 110
Query: 151 ------------EVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVVVIPESVSEGH 194
E K+ +I + D+I+P A +D + + GH
Sbjct: 111 FTQGSFDHQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQIDAALYEVQHG---GH 163
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} Length = 153 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Score = 41.0 bits (95), Expect = 1e-04
Identities = 15/144 (10%), Positives = 39/144 (27%), Gaps = 23/144 (15%)
Query: 814 VIIGYGDVGKGSAQAMRALSAQVWIIEIDPICAL----QAAMEGFLVVTMEYAKKYG--- 866
++ G+ + + + V +I P + Q + V+ +
Sbjct: 7 IVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKK 66
Query: 867 ------DIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQV 920
+ + N + + V + + + K+K
Sbjct: 67 AGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMV-------HP 119
Query: 921 DHIIFPD---GKKIILLAEGRLVN 941
D I+ P + + + G +N
Sbjct: 120 DIILSPQLFGSEILARVLNGEEIN 143
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Length = 129 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Score = 40.2 bits (93), Expect = 2e-04
Identities = 16/123 (13%), Positives = 36/123 (29%), Gaps = 18/123 (14%)
Query: 814 VIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV---------VTMEYAKK 864
VI G+ + + +R ++V+++ D + G + +
Sbjct: 4 VICGWSESTLECLRELRG--SEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVR 61
Query: 865 YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHII 924
+ + H + K V I + +E+L+ D +I
Sbjct: 62 GARAVIVNLESDSETIHCILGIRKIDESVRIIAEAERYENIEQLRMAG-------ADQVI 114
Query: 925 FPD 927
P
Sbjct: 115 SPF 117
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Length = 134 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Score = 39.5 bits (91), Expect = 4e-04
Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 16/126 (12%)
Query: 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYG---- 866
K +IG G G + + + +V ++I+ A V ++
Sbjct: 1 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSL 60
Query: 867 -----DIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVD 921
+ + G + +K+ I N + L+K D
Sbjct: 61 GIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIG-------AD 113
Query: 922 HIIFPD 927
II P+
Sbjct: 114 RIIHPE 119
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 41.1 bits (95), Expect = 4e-04
Identities = 25/211 (11%), Positives = 56/211 (26%), Gaps = 32/211 (15%)
Query: 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGET 90
+LIA F MD+ L + + G+ R + S T
Sbjct: 30 FKNNTILIASG---FARRMDH--FAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMT 84
Query: 91 DDMEIL--LRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV-----A 143
L + + + I L S V ++ L+ I + ++++
Sbjct: 85 TGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDLELSFLITAVGVVNLRDTLEK 144
Query: 144 VKKWLIPEVPKNTIIIHGELDEIIPLKDVFLW----------------ANPLDIPVVVIP 187
+ +P + + + + +VF+ +P++
Sbjct: 145 ALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFT 204
Query: 188 ----ESVSEGHPDKIADQISDAILDEIFLKD 214
+ V + + I L
Sbjct: 205 ANNDDWVKQEEVYDMLAHIRTGHCKLYSLLG 235
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Score = 38.9 bits (90), Expect = 0.002
Identities = 17/158 (10%), Positives = 47/158 (29%), Gaps = 13/158 (8%)
Query: 790 YGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA 849
Y + + + + GK + G+G+V G+A+ + L A+ + P +
Sbjct: 21 YYVEAVM-----KHENDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTL-SGPDGYIYD 74
Query: 850 AMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMK-------DQAIVCNIGHFDNE 902
+ Y + +Y + D + C + +
Sbjct: 75 PEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFFPGEKPWGQKVDIIMPCATQNDVDL 134
Query: 903 IEVEKLKKYKWENIKPQVDHIIFPDGKKIILLAEGRLV 940
+ +K+ + + + + ++ +V
Sbjct: 135 EQAKKIVANNVKYYIEVANMPTTNEALRFLMQQPNMVV 172
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Score = 37.6 bits (87), Expect = 0.003
Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 13/102 (12%)
Query: 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEY------ 861
+ VI+G G VG +A+ L AQV I +I+ V + Y
Sbjct: 30 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEI 89
Query: 862 --AKKYGDIFVTC-----TGNYHVITHDHMRDMKDQAIVCNI 896
A D+ + ++ + M+ +++ ++
Sbjct: 90 ETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDV 131
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} Length = 113 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Score = 35.8 bits (82), Expect = 0.004
Identities = 14/93 (15%), Positives = 32/93 (34%), Gaps = 4/93 (4%)
Query: 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQ--VWIIEIDPICALQAAMEGFLVVTMEYAKKY 865
+ + +I+G GDV + A+ + A+ V + P + A +V + +
Sbjct: 10 LRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETL 69
Query: 866 --GDIFVTCTGNYHVITHDHMRDMKDQAIVCNI 896
+ + + + I CN+
Sbjct: 70 LDSCWLAIAATDDDTVNQRVSDAAESRRIFCNV 102
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1027 | |||
| d1v8ba2 | 313 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 100.0 | |
| d1li4a2 | 267 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 100.0 | |
| d2p02a3 | 144 | S-adenosylmethionine synthetase {Human (Homo sapie | 100.0 | |
| d1mxaa3 | 152 | S-adenosylmethionine synthetase {Escherichia coli | 100.0 | |
| d1mxaa2 | 124 | S-adenosylmethionine synthetase {Escherichia coli | 100.0 | |
| d2p02a2 | 126 | S-adenosylmethionine synthetase {Human (Homo sapie | 100.0 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 100.0 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 100.0 | |
| d2p02a1 | 110 | S-adenosylmethionine synthetase {Human (Homo sapie | 99.96 | |
| d1mxaa1 | 102 | S-adenosylmethionine synthetase {Escherichia coli | 99.93 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.9 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.79 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.79 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.78 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.77 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.77 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.77 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.73 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 99.73 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.72 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.71 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.71 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.71 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.71 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.7 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.7 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.7 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.7 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.7 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.68 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.68 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.68 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.67 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.67 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.66 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.66 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.64 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.64 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.63 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.63 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.62 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.62 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.61 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.57 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.55 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.54 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.52 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.45 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.44 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.44 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.42 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 99.42 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 99.4 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.4 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 99.38 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 99.38 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.36 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.34 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 99.33 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 99.33 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.31 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.3 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.29 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.27 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.27 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 99.26 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.25 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.24 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 99.23 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.21 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.19 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.13 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.1 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.09 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.06 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.06 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.05 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.04 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.03 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.02 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 98.98 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 98.98 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 98.97 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 98.95 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 98.95 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 98.94 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 98.8 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 98.78 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 98.77 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 98.72 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 98.7 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 98.67 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 98.65 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 98.65 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 98.64 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 98.63 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 98.61 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.61 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 98.58 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.58 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 98.57 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 98.57 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 98.57 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 98.52 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 98.52 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 98.5 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 98.49 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 98.47 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 98.43 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 98.41 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.34 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.29 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 98.23 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 98.23 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 98.22 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 98.21 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 98.2 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 98.16 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 98.16 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 98.16 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 98.14 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 98.1 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 98.08 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 98.07 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 98.05 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.0 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 97.96 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 97.94 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 97.89 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 97.88 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 97.86 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 97.85 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 97.82 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.79 | |
| d1qmga2 | 226 | Class II ketol-acid reductoisomerase (KARI) {Spina | 97.76 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.73 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.73 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.73 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.66 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.66 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.64 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 97.49 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.48 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 97.47 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 97.46 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.42 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.42 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.41 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 97.41 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 97.4 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 97.4 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.39 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.36 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 97.31 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 97.23 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.23 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 97.16 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 97.15 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.14 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 97.02 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 97.01 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 96.99 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 96.97 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 96.96 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 96.96 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 96.95 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 96.85 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 96.8 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 96.8 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 96.8 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 96.79 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 96.79 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 96.77 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.76 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 96.73 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 96.72 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 96.61 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 96.6 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 96.55 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 96.53 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 96.5 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.48 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 96.38 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.38 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 96.21 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 96.21 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 96.19 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 96.18 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 96.14 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.14 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 96.13 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 96.12 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.1 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 96.08 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 96.05 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 96.02 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 96.0 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 95.96 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.9 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 95.82 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 95.8 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 95.78 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 95.78 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 95.77 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 95.75 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 95.74 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 95.73 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 95.7 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 95.64 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 95.63 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 95.61 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 95.57 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 95.56 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 95.56 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 95.52 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 95.52 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 95.49 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 95.48 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 95.47 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 95.45 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 95.43 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 95.39 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 95.33 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 95.29 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 95.25 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 95.25 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 95.23 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 95.15 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 95.14 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 95.12 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 95.12 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 95.11 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 95.02 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 94.97 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 94.96 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 94.93 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 94.89 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 94.88 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 94.87 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 94.84 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 94.83 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 94.82 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 94.81 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 94.75 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 94.7 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 94.66 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 94.65 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 94.59 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 94.59 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 94.59 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 94.57 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 94.48 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 94.42 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 94.38 | |
| d1pvva2 | 163 | Ornithine transcarbamoylase {Archaeon Pyrococcus f | 94.36 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 94.35 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 94.33 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 94.3 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 94.18 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 94.18 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 94.15 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 94.14 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 94.14 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 94.14 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 94.13 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 94.12 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 94.12 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 94.11 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 94.1 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 94.1 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 94.08 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 93.95 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 93.95 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 93.94 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 93.91 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 93.86 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 93.85 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 93.8 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 93.69 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 93.66 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 93.57 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 93.52 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 93.51 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 93.4 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 93.4 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 93.38 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 93.38 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 93.32 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 93.31 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 93.22 | |
| d1pj3a1 | 294 | Mitochondrial NAD(P)-dependent malic enzyme {Human | 93.2 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 93.15 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 93.04 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 93.0 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 92.99 | |
| d1vl6a1 | 222 | Malate oxidoreductase (malic enzyme) {Thermotoga m | 92.92 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 92.91 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 92.9 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 92.88 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 92.78 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 92.7 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 92.7 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 92.35 | |
| d1ml4a2 | 157 | Aspartate carbamoyltransferase catalytic subunit { | 92.16 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 91.96 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 91.94 | |
| d1tuga1 | 310 | Aspartate carbamoyltransferase catalytic subunit { | 91.91 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 91.91 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 91.83 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 91.57 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 91.53 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 91.49 | |
| d1pg5a2 | 153 | Aspartate carbamoyltransferase catalytic subunit { | 91.48 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 91.06 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 91.03 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 90.98 | |
| d1vlva2 | 161 | Ornithine transcarbamoylase {Thermotoga maritima [ | 90.97 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 90.94 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 90.94 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 90.9 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 90.88 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 90.81 | |
| d1gq2a1 | 298 | Mitochondrial NAD(P)-dependent malic enzyme {Domes | 90.81 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 90.7 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 90.67 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 90.63 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 90.57 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 90.16 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 90.15 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 90.09 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 90.08 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 90.04 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 89.96 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 89.91 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 89.84 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 89.82 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 89.74 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 89.61 | |
| d2h1qa1 | 251 | Hypothetical protein Dhaf_3308 {Desulfitobacterium | 89.52 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 89.52 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 89.52 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 89.39 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 89.32 | |
| d2at2a2 | 151 | Aspartate carbamoyltransferase catalytic subunit { | 89.2 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 89.16 | |
| d1ekxa2 | 160 | Aspartate carbamoyltransferase catalytic subunit { | 89.09 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 88.98 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 88.91 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 88.89 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 88.89 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 88.81 | |
| d3grsa1 | 221 | Glutathione reductase {Human (Homo sapiens) [TaxId | 88.79 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 88.74 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 88.52 | |
| d1h6va1 | 235 | Mammalian thioredoxin reductase {Rat (Rattus norve | 88.17 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 88.03 | |
| d1ebda1 | 223 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 87.88 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 87.73 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 87.54 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 87.18 | |
| d1ojta1 | 229 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 86.94 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 86.49 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 86.45 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 86.39 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 86.34 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 86.31 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 86.2 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 86.1 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 85.97 | |
| d1otha2 | 170 | Ornithine transcarbamoylase {Human (Homo sapiens) | 85.95 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 85.76 | |
| d1onfa1 | 259 | Glutathione reductase {Plasmodium falciparum [TaxI | 85.18 | |
| d1o0sa1 | 308 | Mitochondrial NAD(P)-dependent malic enzyme {Pig r | 85.06 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 84.9 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 84.86 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 84.74 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 84.64 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 84.39 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 84.35 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 84.35 | |
| d3lada1 | 229 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 84.15 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 84.03 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 84.01 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 83.87 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 83.53 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 83.44 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 83.38 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 83.36 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 83.29 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 83.27 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 83.19 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 83.01 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 82.9 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 82.38 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 82.25 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 82.22 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 82.19 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 82.05 | |
| d1mo9a1 | 261 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 81.9 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 81.82 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 81.29 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 80.83 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 80.75 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 80.44 | |
| d2bs2a2 | 336 | Fumarate reductase {Wolinella succinogenes [TaxId: | 80.33 | |
| d1mv8a3 | 136 | GDP-mannose 6-dehydrogenase, GDP-binding domain {P | 80.04 |
| >d1v8ba2 c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=100.00 E-value=2.9e-97 Score=804.53 Aligned_cols=304 Identities=49% Similarity=0.836 Sum_probs=289.4
Q ss_pred CCceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCCC
Q psy15208 563 ADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYST 642 (1027)
Q Consensus 563 ~~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~st 642 (1027)
+.|+||||+||++|+++|+||++|||+||+||++|+.+|||||+||++|||||+|||+|++||+++||||+|||||||||
T Consensus 1 ~~s~VkDisLA~~G~~~IewAe~eMP~L~alr~~~~~~kPlkG~rIagcLHmt~qTAvLietL~~~GAeV~~~scNp~ST 80 (313)
T d1v8ba2 1 NKSKVKDISLAPFGKMQMEISENEMPGLMRIREEYGKDQPLKNAKITGCLHMTVECALLIETLQKLGAQIRWCSCNIYST 80 (313)
T ss_dssp CCCBCSCGGGHHHHHHHHHHHGGGCHHHHHHHHHSTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSSSCC
T ss_pred CCCccCChhhhHHhHHHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEEccHHHHHHHHHHHHHhCCeeEEeccCCccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh-CCCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhcccccc---ccccCCCCC
Q psy15208 643 QDHAAAAIAS-KGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAEN---NISILSNPC 718 (1027)
Q Consensus 643 qd~~aaal~~-~g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~---~~~~~~~~~ 718 (1027)
||||||||++ .||+||||||||.||||||++++|+|+++. +++|+|||||||||++++|+|.+.|+ ..+.++.|.
T Consensus 81 QD~vAAAl~~~~gi~VfAwkGet~eey~~~i~~~L~~~dg~-~~~P~~IlDDGgDlt~~vh~g~~~E~l~~~~~~lp~p~ 159 (313)
T d1v8ba2 81 ADYAAAAVSTLENVTVFAWKNETLEEYWWCVESALTWGDGD-DNGPDMIVDDGGDATLLVHKGVEYEKLYEEKNILPDPE 159 (313)
T ss_dssp CHHHHHHHTTSTTEEEECCTTCCHHHHHHHHHHHHCCSSSS-SCSCSEEEESSSHHHHHHHHHHHHHHHHHHHCCCCCGG
T ss_pred chHHHHHhhccCCceEEEecCCCHHHHHHHHHHHHhcCCCC-CCCCcEEeehhHHHHHHHHhcchhccccccccccCCCC
Confidence 9999999987 799999999999999999999999998763 26999999999999999999887665 334555553
Q ss_pred ---ChhHHHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhh
Q psy15208 719 ---SEEEVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRES 795 (1027)
Q Consensus 719 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s 795 (1027)
+.+++|++.+|+..+.++|++|++++++++|++|||||||+||++|+++|.|.||+|+|||+.+|++||
T Consensus 160 ~~~n~~~~~~~~~lk~~~~~~~~~~~~~~~~i~GvsEETTTGV~RL~~m~~~g~L~fPainVNDsvtK~~F~-------- 231 (313)
T d1v8ba2 160 KAKNEEERCFLTLLKNSILKNPKKWTNIAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYD-------- 231 (313)
T ss_dssp GCSSHHHHHHHHHHHHHHTTCTTHHHHHHTTCCEEEECSHHHHHHHHHHHHTTCCCSEEEECTTSHHHHTTH--------
T ss_pred CCCCHHHHHHHHHHHHHHhhCcHHHHHhhhcEEEEeCCCCccHHhHHHHHHcCcceeeeEecCcccCHHHhC--------
Confidence 679999999999999999999999999999999999999999999999999999999999999999994
Q ss_pred HHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCC
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~ 875 (1027)
T Consensus 232 -------------------------------------------------------------------------------- 231 (313)
T d1v8ba2 232 -------------------------------------------------------------------------------- 231 (313)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCCcccchhhhhccceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEeh
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSS 955 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~~~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~ 955 (1027)
||++|||+
T Consensus 232 ------------------------------------------------------------------------~P~~vMd~ 239 (313)
T d1v8ba2 232 ------------------------------------------------------------------------HPAFVMSF 239 (313)
T ss_dssp ------------------------------------------------------------------------SCHHHHHH
T ss_pred ------------------------------------------------------------------------CcHHHHHH
Confidence 89999999
Q ss_pred hhHhHHHHHHHHhhcC--CCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCCCCCCCC
Q psy15208 956 SFANQTLAQIELFNNT--SNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027 (1027)
Q Consensus 956 sf~~q~la~~~l~~~~--~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~~~~~~~ 1027 (1027)
||++|+||+.+|+.+. ++++++||.||+++||+||++||++||++||+||++|++||++|++||||||||||
T Consensus 240 SFanQ~La~~~l~~~~~~~~~~~~Vy~lP~~lDe~vA~l~L~~~g~~id~Lt~~Q~~Yl~~~~~gp~k~~~y~y 313 (313)
T d1v8ba2 240 SFCNQTFAQLDLWQNKDTNKYENKVYLLPKHLDEKVALYHLKKLNASLTELDDNQCQFLGVNKSGPFKSNEYRY 313 (313)
T ss_dssp HHHHHHHHHHHHHHTTTSSSCCSSEECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHHTCCTTSCCSCTTCCC
T ss_pred HHHhHHHHHHHHHhcCcccccCCcEEECChHHHHHHHHHHHHhcCCEeccCCHHHHHHCCCCCCCCCCCCCCCC
Confidence 9999999999999765 57999999999999999999999999999999999999999999999999999999
|
| >d1li4a2 c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-91 Score=736.85 Aligned_cols=266 Identities=59% Similarity=0.929 Sum_probs=261.7
Q ss_pred cCCceecCCCchhhhHHhHHHHHHhChhHHHHHHHhhcCCCCCCcEEEEEeechHHHHHHHHHHHhCCCEEEEecCCCCC
Q psy15208 562 SADFVIADINLSQWGRKEIEIAETEMFSLISIREEFVKSKPLKGARISGSIHMTIQTAVLIETLKCLGAEVRWSSCNIYS 641 (1027)
Q Consensus 562 ~~~~~~~d~~l~~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~~i~~~lhl~~~Ta~l~~~L~~~GA~v~~~~~n~~s 641 (1027)
.++|+|||||||++|+++|+||++|||+|++||++|+++|||+|+||++|||||+|||+|++||+++||||+||+|||+|
T Consensus 2 ~~~y~VkD~sLa~~G~~~IewA~~~MPvL~~lr~~~~~~kPl~G~rI~~clHlt~kTA~L~~tL~~~GA~V~~~~~Np~S 81 (267)
T d1li4a2 2 KLPYKVADIGLAAWGRKALDIAENEMPGLMRMRERYSASKPLKGARIAGCLHMTVETAVLIETLVTLGAEVQWSSCNIFS 81 (267)
T ss_dssp CCSCEESCGGGHHHHHHHHHHHHTTCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTC
T ss_pred CCCccccChhhhHHhHHHHHHHHHHCHHHHHHHHHhcccCCCCCCEEEEEEeehHHHHHHHHHHHHccCcEEEeccCccc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhCCCcEEEeeCCCHHHHHHHHHHHhcCCCCCCCcCcceeecccchhhHHhhhccccccccccCCCCCChh
Q psy15208 642 TQDHAAAAIASKGIPVFAFKGESISDYWEFNHRIFDWPGNSNTEQANMILDDGGDATFLLHLGAQAENNISILSNPCSEE 721 (1027)
Q Consensus 642 tqd~~aaal~~~g~~v~a~~~~~~~ey~~~~~~~l~~~~~~~~~~p~~i~DdGgdl~~~~~~~~~~~~~~~~~~~~~~~~ 721 (1027)
|||||||||++.||+||||||+|.||||||++++|+|.+ ++|+||+||||||+.++|
T Consensus 82 TQDdvaAaL~~~Gi~VfA~~g~~~eey~~~~~~~L~~~~----~~P~liiDDG~Dl~~~~h------------------- 138 (267)
T d1li4a2 82 TQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKD----GPLNMILDDGGDLTNLIH------------------- 138 (267)
T ss_dssp CCHHHHHHHHHTTCCEEECTTCCHHHHHHHHHTTTEETT----EECSEEEESSSHHHHHHH-------------------
T ss_pred ccccceeeeccCCceEEEecCCCHHHHHHHHHHHHhccC----CCCcEEEehhhhHHHhhh-------------------
Confidence 999999999999999999999999999999999999876 479999999999999999
Q ss_pred HHHHHHHHHhHhhhCCcchhhhcccccccccchhhHHHHHHHHHHcCCCccceEeecccccccccccchhhhhhHHHHHh
Q psy15208 722 EVCLFKSIKNKLKIDSKWYSSRLKQIKGVTEETTTGVYRLRRMFKEGKLSFPAINVNDSVTKSKFDNLYGCRESLIDGIK 801 (1027)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~EeTttG~~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~i~ 801 (1027)
++||+++++++|++|||||||+||++|+++|.|+||||+||||.+|++|
T Consensus 139 ----------------~~~~~~~~~i~G~~EETTTGV~RL~am~~~g~L~fP~i~VNDa~tK~~F--------------- 187 (267)
T d1li4a2 139 ----------------TKYPQLLPGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKF--------------- 187 (267)
T ss_dssp ----------------HHCGGGGGGCCEEEECSHHHHHHHHHHHHTTCCCSEEEECTTSHHHHTT---------------
T ss_pred ----------------hhcccccCccEEecccccHHHHHHHHHHHCCCCCcceEECCCcchhhhc---------------
Confidence 7899999999999999999999999999999999999999999999999
Q ss_pred hhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcccCcH
Q psy15208 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITH 881 (1027)
Q Consensus 802 r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~ 881 (1027)
T Consensus 188 -------------------------------------------------------------------------------- 187 (267)
T d1li4a2 188 -------------------------------------------------------------------------------- 187 (267)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhcCCCCeEEEEecCCCcccchhhhhccceeccccceeeeecCCCcEEEEecCCccccccCCCCCCcceEehhhHhHH
Q psy15208 882 DHMRDMKDQAIVCNIGHFDNEIEVEKLKKYKWENIKPQVDHIIFPDGKKIILLAEGRLVNLGCGTGHPSYVMSSSFANQT 961 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d~eid~~~l~~~~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~~~G~P~~vmd~sf~~q~ 961 (1027)
||.++|++||++|+
T Consensus 188 ------------------------------------------------------------------~~~~~~~~Sf~~q~ 201 (267)
T d1li4a2 188 ------------------------------------------------------------------HPSFVMSNSFTNQV 201 (267)
T ss_dssp ------------------------------------------------------------------SCHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------------chhHHHHHHHHHHH
Confidence 89999999999999
Q ss_pred HHHHHHhhcCCCCCCcEEeCChHHHHHHHHHhhhhcCccccCCCHHHHhhhCCCCCCCCCCCCCCC
Q psy15208 962 LAQIELFNNTSNYPIGIYTLPKILDEKVARLQLKKLNVQLSKLTDQQAKYIGVSKNGPYKLDNYRY 1027 (1027)
Q Consensus 962 la~~~l~~~~~~~~~gv~~lp~~~d~~vA~~~l~~~g~~~~~l~~~q~~y~~~~~~g~~~~~~~~~ 1027 (1027)
+|+.||+.+++++.++||.||+++|++||++||++||++||+||++|++||++|++||||||||||
T Consensus 202 la~~~L~~~~~~~~~~Vy~lP~~lDe~VArl~L~~lgv~id~Lt~~Q~~Ylgv~~~Gp~k~~~yry 267 (267)
T d1li4a2 202 MAQIELWTHPDKYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSCDGPFKPDHYRY 267 (267)
T ss_dssp HHHHHHHHCGGGCCSEEECCCHHHHHHHHHHHHTTTTCCCCCCCHHHHHHHTSCTTSCCSCTTCCC
T ss_pred HHHHHHHhCccccCCcEEECChHHHHHHHHHHHHhCCcEeccCCHHHHHhCCCCCCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999
|
| >d2p02a3 d.130.1.1 (A:274-417) S-adenosylmethionine synthetase {Human (Homo sapiens), isoform type-2 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: S-adenosylmethionine synthetase superfamily: S-adenosylmethionine synthetase family: S-adenosylmethionine synthetase domain: S-adenosylmethionine synthetase species: Human (Homo sapiens), isoform type-2 [TaxId: 9606]
Probab=100.00 E-value=1.5e-77 Score=580.49 Aligned_cols=143 Identities=57% Similarity=1.028 Sum_probs=141.1
Q ss_pred ecCCCCccccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEE
Q psy15208 413 IGGPKGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIM 492 (1027)
Q Consensus 413 ~ggp~~d~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~ 492 (1027)
||||+|||||||||||||||||+++|||||||||||||||||||||||||||||||+|||+|||||||||||+++|+||+
T Consensus 1 iGGp~~d~GlTGRKiivDtYGg~~~hGGGafsgKD~tKvDRSaAY~AR~iAKniVaaglA~~c~VQlsYAIGva~Pvsi~ 80 (144)
T d2p02a3 1 IGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSIS 80 (144)
T ss_dssp SCGGGTSCEETTSCTTTTTTTTSSCCCSCCCTTBCTTCHHHHHHHHHHHHHHHHHHTTSCSEEEEEEEECBTCCSCSEEE
T ss_pred CCCCccccCCccceEEEEcCCCccccCCcCCCCCceehhHHHHHHHHHHHHHHHHHhCCCCeeEEEEEeecCccccceEE
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHh
Q psy15208 493 VTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAE 557 (1027)
Q Consensus 493 v~~~~t~~~~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~ 557 (1027)
||||||+++++++|.++|+++|||||++||++|+|++|||++||+||||||+ +||||++||++
T Consensus 81 VdtfGT~~~~~~~i~~~I~~~FDl~P~~II~~L~L~~PiY~~TAaYGHFGR~--~f~WEk~dkve 143 (144)
T d2p02a3 81 IFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKKPIYQRTAAYGHFGRD--SFPWEVPKKLK 143 (144)
T ss_dssp EECTTCCSSCHHHHHHHHHHHCCCCHHHHHHHHTTTSSCGGGGSSSCSSSST--TCGGGSCCCCC
T ss_pred EEeCCCcccCHHHHHHHHHhccCCCHHHHHHHhCCCCCcchhccCccCCCCC--CCCeecccccc
Confidence 9999999999999999999999999999999999999999999999999997 59999999985
|
| >d1mxaa3 d.130.1.1 (A:232-383) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: S-adenosylmethionine synthetase superfamily: S-adenosylmethionine synthetase family: S-adenosylmethionine synthetase domain: S-adenosylmethionine synthetase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.5e-77 Score=584.76 Aligned_cols=150 Identities=71% Similarity=1.231 Sum_probs=147.4
Q ss_pred ecCCCCccccCCceeEEecCCCcccCCCccccCCCCCccchhhhhHHHHHHHHhhhhhccceeeeEEEEeeccccceEEE
Q psy15208 413 IGGPKGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKIDRSAAYVGRYIAKNIVAANLAKRCQIQISYAIGVAKPTSIM 492 (1027)
Q Consensus 413 ~ggp~~d~gltgrk~~vdtygg~~~hggga~sgkd~tkvdrs~ay~ar~~ak~~v~~g~a~~~~vq~~yaig~~~p~s~~ 492 (1027)
||||+|||||||||||||||||+++|||||||||||||||||||||||||||||||+|||+|||||||||||+++|+||+
T Consensus 1 iGGp~~d~GlTGRKiivDtYGg~~~~GGGafsGKD~tKVDRSaAY~AR~iAKniVaaglA~~c~VQlsYAIGva~Pvsi~ 80 (152)
T d1mxaa3 1 IGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIM 80 (152)
T ss_dssp SCTTTTSEEETTSSHHHHHTTTSSCCCSCCCTTBCTTCHHHHHHHHHHHHHHHHHHTTSCSEEEEEEEECTTCSSCSEEE
T ss_pred CCCCccccCCccceEEEEcCCCccccCCCCCCCCccccccchHHHHHHHHHHHHHHcCCCcceEEEEeeecCccceeeeE
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHHhcCCCHHHHHHHhcCCcchhhcccccccCCCCCCCCCcccchhHhhhcccCC
Q psy15208 493 VTSFGSGKISDEKLTMLVKKHFDLRPKNIIKMLNLLRPIYKKTSVYGHFGRKEPEFTWELTDKAEVLKNSAD 564 (1027)
Q Consensus 493 v~~~~t~~~~~~~~~~~~~~~f~~~~~~i~~~l~l~~~~y~~~a~~ghfg~~~~~~~we~~~~~~~~~~~~~ 564 (1027)
||||||+++++++|+++|+++|||||++||++|+|++|||++||+||||||+ +||||++||+++||++..
T Consensus 81 V~t~gt~~~~~~~i~~~I~~~FDl~P~~II~~L~L~~PiY~~TAayGHFGR~--~f~WEk~d~v~~lk~a~g 150 (152)
T d1mxaa3 81 VETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGRE--HFPWEKTDKAQLLRDAAG 150 (152)
T ss_dssp EEECSCCSSCHHHHHHHHHHHCCCSHHHHHHHTTCCSSCCGGGGSSCSSSCS--SSGGGCCTTHHHHHHHSS
T ss_pred EEeccCccchhHHHHHHHHHhcCCCHHHHHHhcCCCCCcccccCCCCCCCCC--CCCcccchhHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999997 599999999999998764
|
| >d1mxaa2 d.130.1.1 (A:108-231) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: S-adenosylmethionine synthetase superfamily: S-adenosylmethionine synthetase family: S-adenosylmethionine synthetase domain: S-adenosylmethionine synthetase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.3e-51 Score=391.33 Aligned_cols=119 Identities=65% Similarity=1.094 Sum_probs=116.0
Q ss_pred cCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCCCCceeEEEEecCCceeEEeEEEEeeccCC
Q psy15208 294 FDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNGKPVAIDTIVLSTQHDP 373 (1027)
Q Consensus 294 ~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~~~~pd~k~qv~~~y~~~~~~~~~~~~~s~qh~~ 373 (1027)
+++||||||||||||||||++||||||+|||+|+++|+++||+|.+|||||||||||||+|++|+|++|++||+||||++
T Consensus 5 ~~~GAGDQGimfGYA~~ET~~~MPl~i~lah~l~~~l~~~Rk~~~~~~L~PD~KsQVTv~Y~~~~P~~i~tiViStQH~~ 84 (124)
T d1mxaa2 5 LEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSE 84 (124)
T ss_dssp GGCCCSSCEEEEEEEETTSTTSSCHHHHHHHHHHHHHHHHHHTSSSTTEEEEEEEEEEEEESSSCEEEEEEEEEEEEECS
T ss_pred hccCCCcceEeeeEEcCCccccCchHHHHHHHHHHHHHHHHHcCCCCcccCCCCEEEEEEeeCCCCEEEEEEEeeccCCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCce
Q psy15208 374 EIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFV 412 (1027)
Q Consensus 374 ~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~ 412 (1027)
++++++++++|+++||++++|++++ ++|+||||||||||
T Consensus 85 ~v~~~~lr~~i~~~VI~~vlp~~~l~~~t~~~INPTGrFV 124 (124)
T d1mxaa2 85 EIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFV 124 (124)
T ss_dssp SSCHHHHHHHHHHHTTTTTSCGGGCCTTCEEEESTTCCCC
T ss_pred ccCHHHHHHHHHHHHHHHhhhhhcCCCCCEEEECCCCCcC
Confidence 9999999999999999999999877 67999999999997
|
| >d2p02a2 d.130.1.1 (A:148-273) S-adenosylmethionine synthetase {Human (Homo sapiens), isoform type-2 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: S-adenosylmethionine synthetase superfamily: S-adenosylmethionine synthetase family: S-adenosylmethionine synthetase domain: S-adenosylmethionine synthetase species: Human (Homo sapiens), isoform type-2 [TaxId: 9606]
Probab=100.00 E-value=7.3e-51 Score=390.00 Aligned_cols=119 Identities=50% Similarity=0.897 Sum_probs=114.9
Q ss_pred cCCCCCCceeeeeeecCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCCCCceeEEEEecCCc----eeEEeEEEEee
Q psy15208 294 FDQGAGDQGLMFGYACDETPELMPSAIYYSHLIVKRQSELRKNGNLPWLRPDAKSQVTLRYDNGK----PVAIDTIVLST 369 (1027)
Q Consensus 294 ~~~gagdqg~~~gya~~et~~~mp~~~~~a~~l~~~~~~~r~~~~~~~~~pd~k~qv~~~y~~~~----~~~~~~~~~s~ 369 (1027)
+++|||||||||||||||||+||||||+|||+|+++|+++||+|++|||||||||||||+|++++ |++|++||||+
T Consensus 3 ~~~GAGDQGimfGYA~~ET~~~MPlpi~lAh~L~~~l~~~Rk~~~~~~LrPD~KsQVTv~Y~~~~~~~~P~~i~tVViSt 82 (126)
T d2p02a2 3 EDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISV 82 (126)
T ss_dssp GGCCBSSCEEEEEEEETTSTTSSCHHHHHHHHHHHHHHHHHHTTSSTTEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred cccCCCcceeeeeeEcCCCcccCChHHHHHHHHHHHHHHHHHcCCCCcccCCCcEEEEEEEecCCCceeEEEEEEEEEec
Confidence 36899999999999999999999999999999999999999999999999999999999998764 99999999999
Q ss_pred ccCCCCChHHHHHHHHHHhhhcccCCCCC-CCceEEECCCCCce
Q psy15208 370 QHDPEIPYRSIKEAAIEEIIRPIIPKNLL-KNTRYLINPTGRFV 412 (1027)
Q Consensus 370 qh~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~inp~g~f~ 412 (1027)
||+++++++++|++|+++||++++|++++ ++|+|+||||||||
T Consensus 83 QH~~~~~~~~l~~~i~~~Vi~~vl~~~~ld~~t~~~INPTGrFV 126 (126)
T d2p02a2 83 QHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFV 126 (126)
T ss_dssp EECSSCCHHHHHHHHHHTTHHHHSCGGGCCTTCEEEESTTSCCC
T ss_pred ccccccchHHHHhhhccchhHHhCccccCCCCCEEEECCCCCcC
Confidence 99999999999999999999999999887 67999999999997
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=100.00 E-value=9.3e-44 Score=352.73 Aligned_cols=160 Identities=62% Similarity=1.061 Sum_probs=155.6
Q ss_pred cchhhhhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCC
Q psy15208 788 NLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGD 867 (1027)
Q Consensus 788 n~~g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aD 867 (1027)
|+|||+||++++++|.|+++++||+|+|+|||+||+++|++||++||+|+|+|+||+|++||.|+||++++++++++.+|
T Consensus 1 N~yg~g~S~~d~i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~v~~~~~a~~~aD 80 (163)
T d1v8ba1 1 NVYGCRHSLPDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGD 80 (163)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCS
T ss_pred CccccchhHHHHHHHHhCceecCCEEEEecccccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCccCchhHccccCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhhcc---ceeccccceeeeecCCCcEEEEecCCccccccC
Q psy15208 868 IFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKKY---KWENIKPQVDHIIFPDGKKIILLAEGRLVNLGC 944 (1027)
Q Consensus 868 vvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~~---~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~ 944 (1027)
+||++||++++|+.+||+.||+|++|+|+||||+|||++++... +++++++++++|++|||+.|+||++||+|||+|
T Consensus 81 i~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHfd~EIdv~~L~~~~~~~~~~vrp~V~~y~lpdG~~i~lLaeGrLVNL~~ 160 (163)
T d1v8ba1 81 FFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVKPQVDRITLPNGNKIIVLARGRLLNLGC 160 (163)
T ss_dssp EEEECCSSSSSBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEETTEEEEECTTSCEEEEEGGGSBHHHHS
T ss_pred EEEEcCCCCccccHHHHHHhhCCeEEEeccccchhhhhHHHHhCcCcceeeecCCceEEEeCCCCEEEEEECCcEEEecC
Confidence 99999999999999999999999999999999999999988643 668899999999999999999999999999999
Q ss_pred CCC
Q psy15208 945 GTG 947 (1027)
Q Consensus 945 ~~G 947 (1027)
++|
T Consensus 161 a~G 163 (163)
T d1v8ba1 161 ATG 163 (163)
T ss_dssp SCC
T ss_pred CCC
Confidence 987
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-41 Score=339.24 Aligned_cols=161 Identities=67% Similarity=1.026 Sum_probs=157.1
Q ss_pred ccchhhhhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccC
Q psy15208 787 DNLYGCRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYG 866 (1027)
Q Consensus 787 dn~~g~~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~a 866 (1027)
||+|||+||+|++++|.|+++++||+|+|+|||+||+++|++++++||+|+|+|+||.++++|.++||++.++++++..+
T Consensus 1 dN~yg~g~S~~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~~~~~a~~~a 80 (163)
T d1li4a1 1 DNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACQEG 80 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTC
T ss_pred CCcccchhhHHHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceEeeehhhhhhhc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhhc--cceeccccceeeeecCCCcEEEEecCCccccccC
Q psy15208 867 DIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLKK--YKWENIKPQVDHIIFPDGKKIILLAEGRLVNLGC 944 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~~--~~~~~~~~~v~~y~~~dg~~i~LLa~GrlvNl~~ 944 (1027)
|+||+|||++++|+.+||+.||+|++|+|+|||+.|||++.|.+ .++.++++++++|.+|||+.|+||++||+|||+|
T Consensus 81 divvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd~EId~~~L~~~~~~~~~v~~~v~~y~l~dG~~i~lLaeGrlvNL~~ 160 (163)
T d1li4a1 81 NIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNENAVEKVNIKPQVDRYRLKNGRRIILLAEGRLVNLGC 160 (163)
T ss_dssp SEEEECSSCSCSBCHHHHTTCCTTEEEEECSSSTTSBCHHHHHHHCSEEEEEETTEEEEECTTSCEEEEEGGGSCHHHHS
T ss_pred cEEEecCCCccchhHHHHHhccCCeEEEEeccccceecHHHHhhccceeeeecCCeeEEEeCCCCEEEEEeCCCeEeecC
Confidence 99999999999999999999999999999999999999999975 4777899999999999999999999999999999
Q ss_pred CCC
Q psy15208 945 GTG 947 (1027)
Q Consensus 945 ~~G 947 (1027)
++|
T Consensus 161 a~G 163 (163)
T d1li4a1 161 AMG 163 (163)
T ss_dssp SCC
T ss_pred CCC
Confidence 987
|
| >d2p02a1 d.130.1.1 (A:38-147) S-adenosylmethionine synthetase {Human (Homo sapiens), isoform type-2 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: S-adenosylmethionine synthetase superfamily: S-adenosylmethionine synthetase family: S-adenosylmethionine synthetase domain: S-adenosylmethionine synthetase species: Human (Homo sapiens), isoform type-2 [TaxId: 9606]
Probab=99.96 E-value=6.1e-30 Score=237.27 Aligned_cols=108 Identities=50% Similarity=0.814 Sum_probs=105.5
Q ss_pred ceEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCC
Q psy15208 182 PVVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNID 261 (1027)
Q Consensus 182 ~~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~ 261 (1027)
.++|++|++++|||||+||+|+++++|++|++||++|+||||++++|+|+|+||+++.+++|+++|+|+++++|||++.+
T Consensus 2 ~~lfTsEsVs~GHPDKicDqISDailD~~l~~Dp~arVA~Et~v~~~~V~v~GEitt~~~vd~~~IvR~vi~~IGY~~~~ 81 (110)
T d2p02a1 2 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSS 81 (110)
T ss_dssp EEEEEEEEECTTSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEEETTEEEEEEEEECSCCCCHHHHHHHHHHHHTCEEGG
T ss_pred ceEEEecccCCCCCcHHHHHHHhHHHHHHHhhCcccceeEEEEecCCEEEEEEEecccccccHHHHHHHhhhccCEecCc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceEEEEeeccCChhhhhccccC
Q psy15208 262 YGIDYKSCAVLLIYNKQSLDIAQGVNEG 289 (1027)
Q Consensus 262 ~g~~~~~~~~~~~i~~qs~~i~~~v~~~ 289 (1027)
+|||+++|.|++.|++|||||+|||+.+
T Consensus 82 ~gfd~~t~~V~~~I~~QSpDIa~GVd~~ 109 (110)
T d2p02a1 82 KGFDYKTCNVLVALEQQSPDIAQGVHLD 109 (110)
T ss_dssp GTEETTTSEEEEEEECCCHHHHHHHTTT
T ss_pred CCccccceEEEeeccCCChHHHhhccCC
Confidence 9999999999999999999999999864
|
| >d1mxaa1 d.130.1.1 (A:1-102) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: S-adenosylmethionine synthetase superfamily: S-adenosylmethionine synthetase family: S-adenosylmethionine synthetase domain: S-adenosylmethionine synthetase species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=1.2e-27 Score=219.22 Aligned_cols=101 Identities=54% Similarity=0.770 Sum_probs=98.4
Q ss_pred ceEeeccccCCCCccccchhhhhhHHHHHHhhCcccccccccccccceeeeeeeeeeccchhHHHHHHHHhhhcCCCCCC
Q psy15208 182 PVVVIPESVSEGHPDKIADQISDAILDEIFLKDLKARVAAETLCNNNLIVLSGEITTDANIDYVNIVRKTIKDIGYNNID 261 (1027)
Q Consensus 182 ~~L~t~Esv~~GHPdkvaDqIsdaILD~~L~~Dp~srva~e~l~~~~~v~v~GEist~~~~d~~~~~r~~l~~iGy~~~~ 261 (1027)
..+|++|++.+|||||+||+|+++++|++|++||.+|+||||++++|+|+|+||+++.+++|+++|+|+++++|||++++
T Consensus 2 ~~lfTSEsVs~GHPDKicDqISDaIlD~~L~~Dp~sRVA~Et~~~~~~v~v~GEits~~~vd~~~ivR~~i~~IGY~~~~ 81 (102)
T d1mxaa1 2 KHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSD 81 (102)
T ss_dssp CEEEEEEEECTTSHHHHHHHHHHHHHHHHHTTCTTCEEEEEEEEETTEEEEEEEEECSCCCCHHHHHHHHHHHHTCEEGG
T ss_pred CccEeccccCCCCCcHHHHHHHHHHHHHHHHhCCccceEEEEEEcCCcEEEEEeecccccccHHHHHHHHHHHhcccccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceEEEEeeccCChhh
Q psy15208 262 YGIDYKSCAVLLIYNKQSLDI 282 (1027)
Q Consensus 262 ~g~~~~~~~~~~~i~~qs~~i 282 (1027)
+|||+++|.|++.|++|||||
T Consensus 82 ~gfd~~~~~V~~~i~~QSpdI 102 (102)
T d1mxaa1 82 MGFDANSCAVLSAIGKQSPDI 102 (102)
T ss_dssp GTEETTTSEEEEEEEEECCC-
T ss_pred cccccCceEEEEeccCCCCCC
Confidence 999999999999999999998
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.90 E-value=1.6e-22 Score=212.36 Aligned_cols=175 Identities=31% Similarity=0.614 Sum_probs=151.9
Q ss_pred CCceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 2 ISNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 2 ~m~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
..+++.++|.+++|++.+.+..|+.. ...+.+++|++|+++.++|++++..+..+++.|+++||.|+++|+||+|.|.+
T Consensus 5 p~~~~~l~i~gp~G~l~~~~~~p~~~-~~~~~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g 83 (218)
T d2fuka1 5 PTESAALTLDGPVGPLDVAVDLPEPD-VAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAG 83 (218)
T ss_dssp CSSCEEEEEEETTEEEEEEEECCCTT-SCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCS
T ss_pred CCCceEEEEeCCCccEEEEEEcCCCC-CCCCCcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCC
Confidence 45677899999999999999988652 12345678999999888999988888899999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCCC--CCCCCcEEEE
Q psy15208 82 TYDSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWLI--PEVPKNTIII 159 (1027)
Q Consensus 82 ~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~l--~~i~~PvLiI 159 (1027)
.+.......+|+.++++++..+++..+++++||||||.+++.++.+. .++++|+++|+...+.. ....+|+|+|
T Consensus 84 ~~~~~~~~~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~----~~~~lil~ap~~~~~~~~~~~~~~P~Lvi 159 (218)
T d2fuka1 84 SFDHGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL----EPQVLISIAPPAGRWDFSDVQPPAQWLVI 159 (218)
T ss_dssp CCCTTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH----CCSEEEEESCCBTTBCCTTCCCCSSEEEE
T ss_pred ccCcCcchHHHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhccc----ccceEEEeCCcccchhhhccccccceeeE
Confidence 87777789999999999999998888999999999999999998875 47899999998876543 4567899999
Q ss_pred EeCCCCCCChHHHHhhhCCCCC
Q psy15208 160 HGELDEIIPLKDVFLWANPLDI 181 (1027)
Q Consensus 160 hG~~D~iVP~~~~~~l~~~~~~ 181 (1027)
||++|+++|++.+.++++.+..
T Consensus 160 ~G~~D~~vp~~~~~~l~~~~~~ 181 (218)
T d2fuka1 160 QGDADEIVDPQAVYDWLETLEQ 181 (218)
T ss_dssp EETTCSSSCHHHHHHHHTTCSS
T ss_pred ecCCCcCcCHHHHHHHHHHccC
Confidence 9999999999999988876543
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.79 E-value=1.2e-18 Score=190.73 Aligned_cols=165 Identities=19% Similarity=0.168 Sum_probs=127.9
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCC
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGV-GASSGT 82 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGh-G~S~g~ 82 (1027)
+..+.++..|| +++++.+.|++. ...++++||++||+++ +.. .|..++++|+++||+|+++|+||| |.|++.
T Consensus 4 ~~~h~~~~~dg~~l~~w~~~p~~~-~~~~~~~Vvi~HG~~~---~~~--~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~ 77 (302)
T d1thta_ 4 TIAHVLRVNNGQELHVWETPPKEN-VPFKNNTILIASGFAR---RMD--HFAGLAEYLSTNGFHVFRYDSLHHVGLSSGS 77 (302)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTT-SCCCSCEEEEECTTCG---GGG--GGHHHHHHHHTTTCCEEEECCCBCC------
T ss_pred eeeeEEEcCCCCEEEEEEecCcCC-CCCCCCEEEEeCCCcc---hHH--HHHHHHHHHHHCCCEEEEecCCCCCCCCCCc
Confidence 45677888999 699999988752 2356789999999743 332 578999999999999999999998 888875
Q ss_pred CC--CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-------------
Q psy15208 83 YD--SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------------- 147 (1027)
Q Consensus 83 ~~--~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------------- 147 (1027)
+. +......|+.++++++.... ..+++|+||||||.+++.+|... +++++|+.+|.....
T Consensus 78 ~~~~~~~~~~~dl~~vi~~l~~~~-~~~i~lvG~SmGG~ial~~A~~~----~v~~li~~~g~~~~~~~~~~~~~~~~~~ 152 (302)
T d1thta_ 78 IDEFTMTTGKNSLCTVYHWLQTKG-TQNIGLIAASLSARVAYEVISDL----ELSFLITAVGVVNLRDTLEKALGFDYLS 152 (302)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHTT-CCCEEEEEETHHHHHHHHHTTTS----CCSEEEEESCCSCHHHHHHHHHSSCGGG
T ss_pred ccCCCHHHHHHHHHHHHHhhhccC-CceeEEEEEchHHHHHHHHhccc----ccceeEeecccccHHHHHHHHHhhccch
Confidence 43 33467899999999998763 45899999999999999988643 588999998753200
Q ss_pred ---------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 148 ---------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 148 ---------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
.+.++++|+|++||++|.+||++.+..+++.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~V~~~~~~~l~~~i~ 224 (302)
T d1thta_ 153 LPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIR 224 (302)
T ss_dssp SCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCT
T ss_pred hhhhhccccccccccchhhHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhCC
Confidence 145789999999999999999999999888764
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.79 E-value=2.8e-18 Score=179.02 Aligned_cols=195 Identities=29% Similarity=0.498 Sum_probs=156.3
Q ss_pred EEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCc
Q psy15208 7 FFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSG 86 (1027)
Q Consensus 7 ~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~ 86 (1027)
++.|++++|+|.++++.|.. +++|++|++||++.++|++++.....+++.|.++||.|+++|+||.|.|.+.+...
T Consensus 2 ev~i~g~~G~Le~~~~~~~~----~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~~ 77 (218)
T d2i3da1 2 EVIFNGPAGRLEGRYQPSKE----KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHG 77 (218)
T ss_dssp EEEEEETTEEEEEEEECCSS----TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCSS
T ss_pred cEEEeCCCccEEEEEeCCCC----CCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCccccccc
Confidence 37899999999998765543 46789999999988899999988888999999999999999999999999988777
Q ss_pred cchHHHHHHHHHHHHHhCC-CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC---CCCCCCCcEEEEEeC
Q psy15208 87 NGETDDMEILLRYIQKKYP-YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---LIPEVPKNTIIIHGE 162 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~-~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---~l~~i~~PvLiIhG~ 162 (1027)
....+|..++++|+..+.. ..+++++|+|+||.+++.++.+.+. +.+++++.+....+ .+.....|.+++||+
T Consensus 78 ~~e~~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~ 154 (218)
T d2i3da1 78 AGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE---IEGFMSIAPQPNTYDFSFLAPCPSSGLIINGD 154 (218)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT---EEEEEEESCCTTTSCCTTCTTCCSCEEEEEET
T ss_pred hhHHHHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhcc---ccceeeccccccccchhhccccCCCceeeecc
Confidence 7889999999999988764 3579999999999999999988765 78888888876544 456677999999999
Q ss_pred CCCCCChHHHHhhhCCCC------CceEe--eccccCCCCccccchhhhhhHHH
Q psy15208 163 LDEIIPLKDVFLWANPLD------IPVVV--IPESVSEGHPDKIADQISDAILD 208 (1027)
Q Consensus 163 ~D~iVP~~~~~~l~~~~~------~~~L~--t~Esv~~GHPdkvaDqIsdaILD 208 (1027)
.|.++|......+.+.++ ..... ..+|+..++.+.+.+.+.+++..
T Consensus 155 ~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~g~~~~l~~~v~~~l~~ 208 (218)
T d2i3da1 155 ADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFNGKVDELMGECEDYLDR 208 (218)
T ss_dssp TCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCTTCHHHHHHHHHHHHHH
T ss_pred cceecChHHHHHHHHHHhhccCCCccEEEeCCCCCCCcCCHHHHHHHHHHHHHH
Confidence 999999998876543221 12222 33555566666666666655544
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.78 E-value=2.2e-18 Score=193.34 Aligned_cols=198 Identities=13% Similarity=0.068 Sum_probs=145.6
Q ss_pred CceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 3 SNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 3 m~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
...+.+.|+..+.+++++++.|++ .++.|+||++||+. ++.+. +..+++.|+++||.|+++|+||||.|.+.
T Consensus 104 ~~~e~v~ip~dg~~l~g~l~~P~~---~~~~P~Vi~~hG~~---~~~e~--~~~~~~~l~~~G~~vl~~D~~G~G~s~~~ 175 (360)
T d2jbwa1 104 PPAERHELVVDGIPMPVYVRIPEG---PGPHPAVIMLGGLE---STKEE--SFQMENLVLDRGMATATFDGPGQGEMFEY 175 (360)
T ss_dssp SCEEEEEEEETTEEEEEEEECCSS---SCCEEEEEEECCSS---CCTTT--THHHHHHHHHTTCEEEEECCTTSGGGTTT
T ss_pred CCeEEeecCcCCcccceEEEecCC---CCCceEEEEeCCCC---ccHHH--HHHHHHHHHhcCCEEEEEccccccccCcc
Confidence 345778899877799999999986 36789999999973 44443 45688999999999999999999999865
Q ss_pred CCCccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-------------
Q psy15208 83 YDSGNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------------- 147 (1027)
Q Consensus 83 ~~~~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------------- 147 (1027)
.........+...+++++..... ..+++|+||||||.+++.+|...|. ++++|.+++.....
T Consensus 176 ~~~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~pr---i~a~V~~~~~~~~~~~~~~~~~~~~~~ 252 (360)
T d2jbwa1 176 KRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPR---LAACISWGGFSDLDYWDLETPLTKESW 252 (360)
T ss_dssp CCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTT---CCEEEEESCCSCSTTGGGSCHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCCC---cceEEEEcccccHHHHhhhhhhhhHHH
Confidence 44334455667778888876532 3469999999999999999998774 89999998753210
Q ss_pred ------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCc--eEee-c--cccCCCCcccc
Q psy15208 148 ------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIP--VVVI-P--ESVSEGHPDKI 198 (1027)
Q Consensus 148 ------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~--~L~t-~--Esv~~GHPdkv 198 (1027)
.+.++++|+|++||++|+ +|++.+..+++.+... .++. + +|.....+...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-vp~~~~~~l~~~~~~~~~~l~~~~~g~H~~~~~~~~~ 331 (360)
T d2jbwa1 253 KYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCCHNLGIRP 331 (360)
T ss_dssp HHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGGGGGTTHH
T ss_pred HHhccCCchHHHHHHHHhhcchhhhHhhCCCCEEEEEeCCCC-cCHHHHHHHHHhcCCCCeEEEEECCCCcCCCcChHHH
Confidence 256788999999999998 5899888777755422 2222 2 22223344555
Q ss_pred chhhhhhHHHHHHh
Q psy15208 199 ADQISDAILDEIFL 212 (1027)
Q Consensus 199 aDqIsdaILD~~L~ 212 (1027)
...+.+|+.+.+..
T Consensus 332 ~~~i~dWl~~~L~~ 345 (360)
T d2jbwa1 332 RLEMADWLYDVLVA 345 (360)
T ss_dssp HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhcc
Confidence 55666666665543
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.77 E-value=2.5e-18 Score=181.40 Aligned_cols=166 Identities=13% Similarity=0.136 Sum_probs=118.6
Q ss_pred eEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC
Q psy15208 5 TKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD 84 (1027)
Q Consensus 5 ~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~ 84 (1027)
..+..+++...++++....+++ .|+|||+||++....+ ...|..+++.|++ ||+|+++|+||||.|+....
T Consensus 4 ~~~~~~~~~~~~~h~~~~G~~~------~p~ivllHG~~~~~~~--~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~ 74 (281)
T d1c4xa_ 4 IIEKRFPSGTLASHALVAGDPQ------SPAVVLLHGAGPGAHA--ASNWRPIIPDLAE-NFFVVAPDLIGFGQSEYPET 74 (281)
T ss_dssp CEEEEECCTTSCEEEEEESCTT------SCEEEEECCCSTTCCH--HHHHGGGHHHHHT-TSEEEEECCTTSTTSCCCSS
T ss_pred EEEEEEccCCEEEEEEEEecCC------CCEEEEECCCCCCCcH--HHHHHHHHHHHhC-CCEEEEEeCCCCcccccccc
Confidence 3334556555578887766544 5889999997532221 2246778888875 89999999999999986432
Q ss_pred Ccc----chHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-------------
Q psy15208 85 SGN----GETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------------- 147 (1027)
Q Consensus 85 ~~~----~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------------- 147 (1027)
... .....+..+.+.+... ...+++++||||||.+++.+|.++|+ +++++|++++.....
T Consensus 75 ~~~~~~~~~~~~~~~i~~~i~~~-~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvli~~~~~~~~~~~~~~~~~~~~ 151 (281)
T d1c4xa_ 75 YPGHIMSWVGMRVEQILGLMNHF-GIEKSHIVGNSMGGAVTLQLVVEAPE--RFDKVALMGSVGAPMNARPPELARLLAF 151 (281)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHH-TCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCSSCCSSCCHHHHHHHTG
T ss_pred ccccchhhHHHhhhhcccccccc-ccccceeccccccccccccccccccc--cccceEEeccccCccccchhHHHHHHHh
Confidence 211 1222233333333332 44589999999999999999999998 799999999742100
Q ss_pred -----------------------------------------------------------------CCCCCCCcEEEEEeC
Q psy15208 148 -----------------------------------------------------------------LIPEVPKNTIIIHGE 162 (1027)
Q Consensus 148 -----------------------------------------------------------------~l~~i~~PvLiIhG~ 162 (1027)
.+.++++|+|+++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 231 (281)
T d1c4xa_ 152 YADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGR 231 (281)
T ss_dssp GGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEET
T ss_pred hhhcccchhhhhhhhhcccccccchhhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeC
Confidence 046688999999999
Q ss_pred CCCCCChHHHHhhhCCCCCc
Q psy15208 163 LDEIIPLKDVFLWANPLDIP 182 (1027)
Q Consensus 163 ~D~iVP~~~~~~l~~~~~~~ 182 (1027)
+|.++|++....+.+.++..
T Consensus 232 ~D~~~~~~~~~~~~~~~~~~ 251 (281)
T d1c4xa_ 232 QDRIVPLDTSLYLTKHLKHA 251 (281)
T ss_dssp TCSSSCTHHHHHHHHHCSSE
T ss_pred CCCCcCHHHHHHHHHHCCCC
Confidence 99999999988887766543
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.77 E-value=7.7e-18 Score=178.42 Aligned_cols=184 Identities=15% Similarity=0.098 Sum_probs=133.1
Q ss_pred EEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC----
Q psy15208 9 NINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD---- 84 (1027)
Q Consensus 9 ~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~---- 84 (1027)
.+.+.+-+|++..+.+++ .|+|||+||++. +... ++..+++.|.++||+|+++|+||||.|+....
T Consensus 4 ~~~~g~~~i~y~~~G~~~------~p~vvl~HG~~~---~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~ 73 (297)
T d1q0ra_ 4 IVPSGDVELWSDDFGDPA------DPALLLVMGGNL---SALG-WPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHP 73 (297)
T ss_dssp EEEETTEEEEEEEESCTT------SCEEEEECCTTC---CGGG-SCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSC
T ss_pred EEEECCEEEEEEEecCCC------CCEEEEECCCCc---ChhH-HHHHHHHHHHhCCCEEEEEeCCCCcccccccccccc
Confidence 456666688888886543 578999999843 2221 22467888999999999999999999975321
Q ss_pred -CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC----------------
Q psy15208 85 -SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---------------- 147 (1027)
Q Consensus 85 -~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---------------- 147 (1027)
+...++.|+..+++.+ +..+++++||||||.+++.+|.++|+ +++++|++++.....
T Consensus 74 ~~~~~~~~d~~~ll~~l----~~~~~~lvGhS~Gg~~a~~~a~~~P~--~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 147 (297)
T d1q0ra_ 74 YGFGELAADAVAVLDGW----GVDRAHVVGLSMGATITQVIALDHHD--RLSSLTMLLGGGLDIDFDANIERVMRGEPTL 147 (297)
T ss_dssp CCHHHHHHHHHHHHHHT----TCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCCCTTCCHHHHHHHHHHTCCCS
T ss_pred cccchhhhhhccccccc----cccceeeccccccchhhhhhhccccc--ceeeeEEEccccccccchhhhHHHhhhhhhh
Confidence 2344566666665544 45589999999999999999999999 899999987642100
Q ss_pred --------------------------------------------------------------------------------
Q psy15208 148 -------------------------------------------------------------------------------- 147 (1027)
Q Consensus 148 -------------------------------------------------------------------------------- 147 (1027)
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (297)
T d1q0ra_ 148 DGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPS 227 (297)
T ss_dssp SCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGG
T ss_pred hhhhhhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhcccc
Confidence
Q ss_pred ---CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceEeeccccCCCCccccchhhhhhHHH
Q psy15208 148 ---LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVVVIPESVSEGHPDKIADQISDAILD 208 (1027)
Q Consensus 148 ---~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L~t~Esv~~GHPdkvaDqIsdaILD 208 (1027)
.+.++++|+++++|++|.++|+..+..+.+.++...+...+...+..+.+..+++.+.++.
T Consensus 228 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 291 (297)
T d1q0ra_ 228 RAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHALPSSVHGPLAEVILA 291 (297)
T ss_dssp GGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTTEEEEEETTCCSSCCGGGHHHHHHHHHH
T ss_pred chhhhhccCCceEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCcchhhCHHHHHHHHHH
Confidence 0345689999999999999999999888777665444444444444455666666666655
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=2.2e-19 Score=185.99 Aligned_cols=149 Identities=13% Similarity=0.134 Sum_probs=111.7
Q ss_pred EEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHH--HHHHHHhCCcEEEEEcCCCCCCCCCCCC--
Q psy15208 9 NINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQT--LVRVMLSLGYISIRMNFRGVGASSGTYD-- 84 (1027)
Q Consensus 9 ~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~--la~~La~~Gy~Vla~DlrGhG~S~g~~~-- 84 (1027)
+++-.+.+++++.+.|.. .+.+|+|||+||++. +. ..|.. .++.|+++||+|+++|+||||.|++...
T Consensus 10 ~i~v~G~~i~y~~~~~~~---~~~~~~vvllHG~~~---~~--~~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~ 81 (208)
T d1imja_ 10 TIQVQGQALFFREALPGS---GQARFSVLLLHGIRF---SS--ETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPA 81 (208)
T ss_dssp CEEETTEEECEEEEECSS---SCCSCEEEECCCTTC---CH--HHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSS
T ss_pred EEEECCEEEEEEEecCCC---CCCCCeEEEECCCCC---Ch--hHHhhhHHHHHHHHcCCeEEEeecccccCCCCCCccc
Confidence 344333378888788765 356788999999742 32 23544 4688999999999999999999975321
Q ss_pred --CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC----CCCCCCCcEEE
Q psy15208 85 --SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW----LIPEVPKNTII 158 (1027)
Q Consensus 85 --~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~----~l~~i~~PvLi 158 (1027)
.......++.++++.+ +..+++|+||||||.+++.++.++|+ +++++|+++|..... .+..+.+|+|+
T Consensus 82 ~~~~~~~~~~l~~~~~~l----~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lV~~~p~~~~~~~~~~~~~i~~P~Li 155 (208)
T d1imja_ 82 PIGELAPGSFLAAVVDAL----ELGPPVVISPSLSGMYSLPFLTAPGS--QLPGFVPVAPICTDKINAANYASVKTPALI 155 (208)
T ss_dssp CTTSCCCTHHHHHHHHHH----TCCSCEEEEEGGGHHHHHHHHTSTTC--CCSEEEEESCSCGGGSCHHHHHTCCSCEEE
T ss_pred ccchhhhhhhhhhccccc----ccccccccccCcHHHHHHHHHHHhhh--hcceeeecCccccccccccccccccccccc
Confidence 1223445556665554 34478999999999999999999999 799999999864322 25678999999
Q ss_pred EEeCCCCCCChHH
Q psy15208 159 IHGELDEIIPLKD 171 (1027)
Q Consensus 159 IhG~~D~iVP~~~ 171 (1027)
+||++|+++|.+.
T Consensus 156 i~G~~D~~~~~~~ 168 (208)
T d1imja_ 156 VYGDQDPMGQTSF 168 (208)
T ss_dssp EEETTCHHHHHHH
T ss_pred ccCCcCcCCcHHH
Confidence 9999999888654
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.73 E-value=8.3e-18 Score=183.76 Aligned_cols=134 Identities=16% Similarity=0.052 Sum_probs=95.5
Q ss_pred eEEEEEecCCc-eEEEEEEe--cCCccccCCccEEEEECCCCCCCCCCChH-HHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q psy15208 5 TKFFNINGSVG-ILHCAINF--PSSIKLLKLKGVVLIAHPHPLFGGTMDNK-VVQTLVRVMLSLGYISIRMNFRGVGASS 80 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~--P~~~~~~~~~pvVVllHG~~~~gGs~~~~-~~~~la~~La~~Gy~Vla~DlrGhG~S~ 80 (1027)
.+.+.+.|+|| .|..+.+. +......+++|+|||+||++..+.++... ....++..|+++||+|+++|+||||.|+
T Consensus 27 ~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G~S~ 106 (377)
T d1k8qa_ 27 AEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWAR 106 (377)
T ss_dssp CEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSC
T ss_pred ceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCCCCCCC
Confidence 46788999999 44444332 22222235789999999985432222110 1135899999999999999999999997
Q ss_pred CCCC-----------Ccc-chHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEE
Q psy15208 81 GTYD-----------SGN-GETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILI 140 (1027)
Q Consensus 81 g~~~-----------~~~-~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli 140 (1027)
.... ++. ....|+.++++++....+..+++|+||||||.+++.++.++|+ .+++++++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~--~~~~l~~~ 176 (377)
T d1k8qa_ 107 RNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPK--LAKRIKTF 176 (377)
T ss_dssp EESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHH--HHTTEEEE
T ss_pred CCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhh--hhhhceeE
Confidence 4210 011 1356888899999888788899999999999999999999998 55555543
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.73 E-value=3.1e-17 Score=170.92 Aligned_cols=145 Identities=18% Similarity=0.213 Sum_probs=107.3
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAG 113 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVG 113 (1027)
|+|||+||++...+++ ..|..+++.|+ +||+|+++|+||||.|...... ....++....+..+....+.++++|+|
T Consensus 24 ~pvvllHG~~~~~~~~--~~~~~~~~~l~-~~~~vi~~Dl~G~G~S~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~lvG 99 (271)
T d1uk8a_ 24 QPVILIHGSGPGVSAY--ANWRLTIPALS-KFYRVIAPDMVGFGFTDRPENY-NYSKDSWVDHIIGIMDALEIEKAHIVG 99 (271)
T ss_dssp SEEEEECCCSTTCCHH--HHHTTTHHHHT-TTSEEEEECCTTSTTSCCCTTC-CCCHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CeEEEECCCCCCccHH--HHHHHHHHHHh-CCCEEEEEeCCCCCCccccccc-cccccccchhhhhhhhhhcCCCceEee
Confidence 5679999985432221 23556677786 5999999999999999864322 223444444555555555667899999
Q ss_pred echhHHHHHHHHHhcCCcCCccEEEEEccCCCcC----------------------------------------------
Q psy15208 114 FSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---------------------------------------------- 147 (1027)
Q Consensus 114 hSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---------------------------------------------- 147 (1027)
|||||.+++.+|.++|+ +++++|+.++.....
T Consensus 100 ~S~Gg~ia~~~a~~~p~--~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (271)
T d1uk8a_ 100 NAFGGGLAIATALRYSE--RVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASI 177 (271)
T ss_dssp ETHHHHHHHHHHHHCGG--GEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHT
T ss_pred ccccceeehHHHHhhhc--cchheeecccCCCcccchhhhhhhhhccchhHHHHHHHHHHhhhcccchhHHHHHHHhhhh
Confidence 99999999999999998 799999998753211
Q ss_pred ----------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceE
Q psy15208 148 ----------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVV 184 (1027)
Q Consensus 148 ----------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L 184 (1027)
.+..+++|+++++|++|.++|++....+.+.++...+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~ 242 (271)
T d1uk8a_ 178 QPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQL 242 (271)
T ss_dssp STTHHHHHHTTSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTEEE
T ss_pred chhHHHHHHhhcchhhhhhhhhccccHHHHHhhccceeEEecCCCCCcCHHHHHHHHHhCCCCEE
Confidence 0457889999999999999999998887776554433
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.72 E-value=2.4e-17 Score=167.36 Aligned_cols=103 Identities=12% Similarity=0.078 Sum_probs=81.1
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAG 113 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVG 113 (1027)
+.|||+||++. +. ..|..+++.|+++||+|+++|+||||.|+..........+....+...+.......+++++|
T Consensus 3 ~~vvllHG~~~---~~--~~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvg 77 (258)
T d1xkla_ 3 KHFVLVHGACH---GG--WSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVG 77 (258)
T ss_dssp CEEEEECCTTC---CG--GGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCSSSCEEEEE
T ss_pred CcEEEECCCCC---CH--HHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCcchHHHHHHHhhhhhcccccccccccc
Confidence 56899999743 22 24788999999999999999999999998653333344444555555565555556899999
Q ss_pred echhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 114 FSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 114 hSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
|||||.+++.++.++|+ +++++|++++.
T Consensus 78 hS~Gg~va~~~a~~~p~--~~~~lil~~~~ 105 (258)
T d1xkla_ 78 HSLGGMNLGLAMEKYPQ--KIYAAVFLAAF 105 (258)
T ss_dssp ETTHHHHHHHHHHHCGG--GEEEEEEESCC
T ss_pred cchhHHHHHHHhhhhcc--ccceEEEeccc
Confidence 99999999999999999 79999999864
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=1.4e-16 Score=170.16 Aligned_cols=115 Identities=15% Similarity=0.181 Sum_probs=87.9
Q ss_pred EEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---
Q psy15208 9 NINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD--- 84 (1027)
Q Consensus 9 ~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~--- 84 (1027)
.+++++| +|++..+. + .|+|||+||++. +. ..|..+++.|+++||+|+++|+||||.|.....
T Consensus 15 ~v~~~~g~~i~y~~~G-~-------gp~vlllHG~~~---~~--~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~ 81 (322)
T d1zd3a2 15 YVTVKPRVRLHFVELG-S-------GPAVCLCHGFPE---SW--YSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEE 81 (322)
T ss_dssp EEEEETTEEEEEEEEC-C-------SSEEEEECCTTC---CG--GGGTTHHHHHHHTTCEEEEEECTTSTTSCCCSCGGG
T ss_pred EEEECCCCEEEEEEEc-C-------CCeEEEECCCCC---CH--HHHHHHHHHHHHCCCEEEEecccccccccccccccc
Confidence 5667777 67776552 1 367999999853 22 247788999999999999999999999986432
Q ss_pred -CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 85 -SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 85 -~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+....+.|+.++++.+ +..+++++||||||.+++.+|.++|+ +++++|++++
T Consensus 82 ~~~~~~~~~i~~l~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lvl~~~ 134 (322)
T d1zd3a2 82 YCMEVLCKEMVTFLDKL----GLSQAVFIGHDWGGMLVWYMALFYPE--RVRAVASLNT 134 (322)
T ss_dssp GSHHHHHHHHHHHHHHH----TCSCEEEEEETHHHHHHHHHHHHCTT--TEEEEEEESC
T ss_pred ccccccchhhhhhhhcc----cccccccccccchHHHHHHHHHhCCc--cccceEEEcc
Confidence 2234455555555544 44589999999999999999999999 8999999874
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.71 E-value=9.2e-17 Score=167.28 Aligned_cols=116 Identities=21% Similarity=0.203 Sum_probs=87.0
Q ss_pred EEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CC
Q psy15208 9 NINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DS 85 (1027)
Q Consensus 9 ~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~ 85 (1027)
+++++|| ++++..+. . .|+|||+||++. +. ..|..+++.|+++||+|+++|+||||.|.... .+
T Consensus 2 ~~~t~dG~~l~y~~~G-~-------g~~ivlvHG~~~---~~--~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~ 68 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDWG-Q-------GRPVVFIHGWPL---NG--DAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYD 68 (274)
T ss_dssp EEECTTSCEEEEEEEC-S-------SSEEEEECCTTC---CG--GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCS
T ss_pred eEECcCCCEEEEEEEC-C-------CCeEEEECCCCC---CH--HHHHHHHHHHHHCCCEEEEEeCCCCccccccccccc
Confidence 4788999 78876653 2 246899999843 22 25788899999999999999999999998643 23
Q ss_pred ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhc-CCcCCccEEEEEccC
Q psy15208 86 GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRL-DKEISIKILILISVA 143 (1027)
Q Consensus 86 ~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~-p~~~~V~gLVli~p~ 143 (1027)
....+.|+.++++.+ ...+++++||||||.+++.+++++ |+ ++++++++++.
T Consensus 69 ~~~~~~dl~~~l~~l----~~~~~~lvGhS~Gg~~~~~~~a~~~p~--~v~~~~~~~~~ 121 (274)
T d1a8qa_ 69 FDTFADDLNDLLTDL----DLRDVTLVAHSMGGGELARYVGRHGTG--RLRSAVLLSAI 121 (274)
T ss_dssp HHHHHHHHHHHHHHT----TCCSEEEEEETTHHHHHHHHHHHHCST--TEEEEEEESCC
T ss_pred chhhHHHHHHHHHHh----hhhhhcccccccccchHHHHHHHhhhc--cceeEEEEecc
Confidence 344566666655544 445899999999999998876665 66 79999999863
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.71 E-value=1e-16 Score=168.72 Aligned_cols=141 Identities=18% Similarity=0.145 Sum_probs=103.5
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHH---HHHHHhCCcEEEEEcCCCCCCCCCCCCCc---cchHHHHHHHHHHHHHhCCC
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTL---VRVMLSLGYISIRMNFRGVGASSGTYDSG---NGETDDMEILLRYIQKKYPY 106 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~l---a~~La~~Gy~Vla~DlrGhG~S~g~~~~~---~~~~~Dv~avl~~L~~~~~~ 106 (1027)
.|+|||+||++.... .|..+ ...+.++||+|+++|+||||.|....... ...++|+.++++.+ +.
T Consensus 30 G~~ivllHG~~~~~~-----~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~i~~li~~l----~~ 100 (283)
T d2rhwa1 30 GETVIMLHGGGPGAG-----GWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL----DI 100 (283)
T ss_dssp SSEEEEECCCSTTCC-----HHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHHH----TC
T ss_pred CCeEEEECCCCCChh-----HHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccccchhhhhcccccccc----cc
Confidence 367899999854322 23332 33455789999999999999998643222 23455666666554 34
Q ss_pred CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc------C---------------------------------
Q psy15208 107 LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK------W--------------------------------- 147 (1027)
Q Consensus 107 ~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~------~--------------------------------- 147 (1027)
.+++++||||||.+++.+|.++|+ +++++|+++|.... +
T Consensus 101 ~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (283)
T d2rhwa1 101 DRAHLVGNAMGGATALNFALEYPD--RIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSL 178 (283)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGG
T ss_pred cccccccccchHHHHHHHHHHhhh--hcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhhhhHHHHHHHhhccccc
Confidence 589999999999999999999998 79999999874210 0
Q ss_pred ---------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceE
Q psy15208 148 ---------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVV 184 (1027)
Q Consensus 148 ---------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L 184 (1027)
.+..+++|+++++|++|.++|++.+..+.+.++...+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~ 254 (283)
T d2rhwa1 179 ITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARL 254 (283)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSSSEEE
T ss_pred CcHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCEE
Confidence 0446789999999999999999998887776544333
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.71 E-value=5.7e-17 Score=168.65 Aligned_cols=118 Identities=20% Similarity=0.188 Sum_probs=92.1
Q ss_pred EEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--C
Q psy15208 9 NINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD--S 85 (1027)
Q Consensus 9 ~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~--~ 85 (1027)
+|++.|| +|++..+.|++ .|+|||+||++. +. ..|..+++.|+++||+|+++|+||||.|+.... +
T Consensus 2 ~i~~~dG~~l~y~~~G~~~------~~~vv~lHG~~~---~~--~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~ 70 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWGPRD------GLPVVFHHGWPL---SA--DDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHD 70 (275)
T ss_dssp EEECTTSCEEEEEEESCTT------SCEEEEECCTTC---CG--GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCS
T ss_pred EEEecCCCEEEEEEecCCC------CCeEEEECCCCC---CH--HHHHHHHHHHHhCCCEEEEEeccccccccccccccc
Confidence 4788899 79998888765 357899999853 32 247788999999999999999999999985332 3
Q ss_pred ccchHHHHHHHHHHHHHhCCCCcEEEEEech-hHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 86 GNGETDDMEILLRYIQKKYPYLPIILAGFSF-GTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 86 ~~~~~~Dv~avl~~L~~~~~~~pviLVGhSm-GG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
...+++|+.++++.+. ..+++++|||+ ||.+++.+|.++|+ +++++|++++.
T Consensus 71 ~~~~~~~~~~~l~~l~----~~~~~~vg~s~~G~~~~~~~a~~~p~--~v~~lvl~~~~ 123 (275)
T d1a88a_ 71 MDTYAADVAALTEALD----LRGAVHIGHSTGGGEVARYVARAEPG--RVAKAVLVSAV 123 (275)
T ss_dssp HHHHHHHHHHHHHHHT----CCSEEEEEETHHHHHHHHHHHHSCTT--SEEEEEEESCC
T ss_pred cccccccccccccccc----ccccccccccccccchhhcccccCcc--hhhhhhhhccc
Confidence 4566777777777663 34788899987 66677778889998 79999999864
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.70 E-value=3.2e-17 Score=175.89 Aligned_cols=116 Identities=22% Similarity=0.214 Sum_probs=89.4
Q ss_pred cCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC----Cc
Q psy15208 12 GSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD----SG 86 (1027)
Q Consensus 12 t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~----~~ 86 (1027)
+.+| ++++.-+.+.+ ..|+|||+||++. +. ..|..+...|+++||+|+++|+||||.|.+... +.
T Consensus 30 ~~~g~~~~y~~~G~~~-----~~p~llllHG~~~---~~--~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~ 99 (310)
T d1b6ga_ 30 GYPGLRAHYLDEGNSD-----AEDVFLCLHGEPT---WS--YLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTF 99 (310)
T ss_dssp TCTTCEEEEEEEECTT-----CSCEEEECCCTTC---CG--GGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCH
T ss_pred CCCCEEEEEEEecCCC-----CCCEEEEECCCCC---ch--HHHHHHHHHhhccCceEEEeeecCccccccccccccccc
Confidence 3456 78776665543 4688999999853 22 246778899999999999999999999985322 33
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
...++|+.++++.+ +..+++|+||||||.+++.+|.++|+ +|+++|++++.
T Consensus 100 ~~~~~~l~~~l~~l----~~~~~~lvGhS~Gg~ia~~~A~~~P~--~V~~lvl~~~~ 150 (310)
T d1b6ga_ 100 EFHRNFLLALIERL----DLRNITLVVQDWGGFLGLTLPMADPS--RFKRLIIMNAC 150 (310)
T ss_dssp HHHHHHHHHHHHHH----TCCSEEEEECTHHHHHHTTSGGGSGG--GEEEEEEESCC
T ss_pred cccccchhhhhhhc----cccccccccceecccccccchhhhcc--ccceEEEEcCc
Confidence 44566666665544 44589999999999999999999999 89999999864
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.70 E-value=5.4e-17 Score=165.61 Aligned_cols=101 Identities=16% Similarity=0.166 Sum_probs=76.8
Q ss_pred EEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEEec
Q psy15208 36 VLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGFS 115 (1027)
Q Consensus 36 VVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhS 115 (1027)
.||+||++. +. ..|+.+++.|+++||+|+++|+||||.|+............+..+.+.+.......+++|+|||
T Consensus 5 ~vliHG~~~---~~--~~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lvGhS 79 (256)
T d3c70a1 5 FVLIHTICH---GA--WIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGES 79 (256)
T ss_dssp EEEECCTTC---CG--GGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHHSCTTCCEEEEEET
T ss_pred EEEeCCCCC---CH--HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhhhhccccceeecccc
Confidence 589999743 22 2478899999999999999999999999864322222333333344444444456689999999
Q ss_pred hhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 116 FGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 116 mGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
|||.+++.++.++|+ +++++|++++.
T Consensus 80 ~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 105 (256)
T d3c70a1 80 CGGLNIAIAADKYCE--KIAAAVFHNSV 105 (256)
T ss_dssp THHHHHHHHHHHHGG--GEEEEEEESCC
T ss_pred hHHHHHHHHhhcCch--hhhhhheeccc
Confidence 999999999999999 79999999864
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.70 E-value=2.4e-16 Score=168.94 Aligned_cols=167 Identities=18% Similarity=0.065 Sum_probs=129.8
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
+.+++.+++.+| +|+++++.|++ .++.|+||++||++ ++.. .|..++..|+++||.|+++|+||||.|.+.
T Consensus 55 ~~~~v~~~~~dg~~i~~~l~~P~~---~~~~P~vv~~HG~~---~~~~--~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~ 126 (318)
T d1l7aa_ 55 KVYRLTYKSFGNARITGWYAVPDK---EGPHPAIVKYHGYN---ASYD--GEIHEMVNWALHGYATFGMLVRGQQRSEDT 126 (318)
T ss_dssp EEEEEEEEEGGGEEEEEEEEEESS---CSCEEEEEEECCTT---CCSG--GGHHHHHHHHHTTCEEEEECCTTTSSSCCC
T ss_pred EEEEEEEECCCCcEEEEEEEecCC---CCCceEEEEecCCC---CCcc--chHHHHHHHHHCCCEEEEEeeCCCCCCCCC
Confidence 345688899888 79999999987 46789999999974 3332 466788999999999999999999999864
Q ss_pred CCCc--------------------cchHHHHHHHHHHHHHhCCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEE
Q psy15208 83 YDSG--------------------NGETDDMEILLRYIQKKYPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILI 140 (1027)
Q Consensus 83 ~~~~--------------------~~~~~Dv~avl~~L~~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli 140 (1027)
.... .....|....++++..+... .++.++|+|+||..++..+...+. +.+++..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~---~~~~~~~ 203 (318)
T d1l7aa_ 127 SISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI---PKAAVAD 203 (318)
T ss_dssp CCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC---CSEEEEE
T ss_pred cccchhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc---cceEEEe
Confidence 3110 12356777788888776432 359999999999999999999875 7777777
Q ss_pred ccCCCcC------------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 141 SVAVKKW------------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 141 ~p~~~~~------------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
.|....+ .+.++++|+|++||++|.++|++.+..+++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~ 283 (318)
T d1l7aa_ 204 YPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNH 283 (318)
T ss_dssp SCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred ccccccHHHHhhcccccccchhhhhhhccccccccccccccccccccccccccCCCCEEEEEECCCCCcCHHHHHHHHHH
Confidence 6643211 1567899999999999999999999888776
Q ss_pred CCC
Q psy15208 179 LDI 181 (1027)
Q Consensus 179 ~~~ 181 (1027)
+..
T Consensus 284 l~~ 286 (318)
T d1l7aa_ 284 LET 286 (318)
T ss_dssp CCS
T ss_pred cCC
Confidence 653
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.70 E-value=1.5e-16 Score=165.41 Aligned_cols=155 Identities=14% Similarity=0.206 Sum_probs=112.5
Q ss_pred EecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCCh-HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CC
Q psy15208 10 INGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDN-KVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DS 85 (1027)
Q Consensus 10 I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~-~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~ 85 (1027)
++. +| ++++..+. + .|+|||+||++. +... ..|..+.+.|+ +||+|+++|+||||.|+... .+
T Consensus 7 ~~~-dg~~l~y~~~G-~-------g~~vvllHG~~~---~~~~~~~~~~~~~~l~-~~~~v~~~D~~G~G~S~~~~~~~~ 73 (268)
T d1j1ia_ 7 VNA-GGVETRYLEAG-K-------GQPVILIHGGGA---GAESEGNWRNVIPILA-RHYRVIAMDMLGFGKTAKPDIEYT 73 (268)
T ss_dssp EEE-TTEEEEEEEEC-C-------SSEEEEECCCST---TCCHHHHHTTTHHHHT-TTSEEEEECCTTSTTSCCCSSCCC
T ss_pred EEE-CCEEEEEEEEc-C-------CCeEEEECCCCC---CccHHHHHHHHHHHHh-cCCEEEEEcccccccccCCccccc
Confidence 444 55 67654432 1 246899999743 2222 24667788885 49999999999999998532 23
Q ss_pred ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC------------------
Q psy15208 86 GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------------------ 147 (1027)
Q Consensus 86 ~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------------------ 147 (1027)
....+.|+.++++.+ ....+++++||||||.+++.+|.++|+ +++++|+++|+....
T Consensus 74 ~~~~~~~~~~~i~~l---~~~~~~~liG~S~Gg~ia~~~a~~~p~--~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (268)
T d1j1ia_ 74 QDRRIRHLHDFIKAM---NFDGKVSIVGNSMGGATGLGVSVLHSE--LVNALVLMGSAGLVVEIHEDLRPIINYDFTREG 148 (268)
T ss_dssp HHHHHHHHHHHHHHS---CCSSCEEEEEEHHHHHHHHHHHHHCGG--GEEEEEEESCCBCCCC----------CCSCHHH
T ss_pred cccccccchhhHHHh---hhcccceeeeccccccccchhhccChH--hhheeeecCCCccccccchhhhhhhhhhhhhhh
Confidence 344566665555443 223479999999999999999999999 899999998752100
Q ss_pred ------------------------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHH
Q psy15208 148 ------------------------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVF 173 (1027)
Q Consensus 148 ------------------------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~ 173 (1027)
.+..+.+|+++++|++|.++|++.+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~ 228 (268)
T d1j1ia_ 149 MVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAY 228 (268)
T ss_dssp HHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHH
T ss_pred hHHHHHHHhhhhhhhhhhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCCCCCHHHHH
Confidence 04678899999999999999999988
Q ss_pred hhhCCCCCc
Q psy15208 174 LWANPLDIP 182 (1027)
Q Consensus 174 ~l~~~~~~~ 182 (1027)
.+.+.++..
T Consensus 229 ~~~~~~~~~ 237 (268)
T d1j1ia_ 229 KFLDLIDDS 237 (268)
T ss_dssp HHHHHCTTE
T ss_pred HHHHhCCCC
Confidence 887766443
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.70 E-value=8.5e-17 Score=167.64 Aligned_cols=119 Identities=15% Similarity=0.087 Sum_probs=88.1
Q ss_pred EecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC---Cc
Q psy15208 10 INGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD---SG 86 (1027)
Q Consensus 10 I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~---~~ 86 (1027)
++..+.++++..+.+++ .+|+|||+||++..+ . .|......|+++||+|+++|+||||.|+.... +.
T Consensus 7 ~~~~g~~i~y~~~g~~~-----~~~~iv~lHG~~g~~---~--~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 76 (290)
T d1mtza_ 7 AKVNGIYIYYKLCKAPE-----EKAKLMTMHGGPGMS---H--DYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTI 76 (290)
T ss_dssp EEETTEEEEEEEECCSS-----CSEEEEEECCTTTCC---S--GGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSH
T ss_pred EEECCEEEEEEEcCCCC-----CCCeEEEECCCCCch---H--HHHHHHHHHHHCCCEEEEEeCCCCccccccccccccc
Confidence 33333378877776543 467899999974322 2 24455556777899999999999999985321 33
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
...++|+.++++.+. +..+++|+||||||.+++.+|.++|+ ++++++++++.
T Consensus 77 ~~~~~~l~~ll~~l~---~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 128 (290)
T d1mtza_ 77 DYGVEEAEALRSKLF---GNEKVFLMGSSYGGALALAYAVKYQD--HLKGLIVSGGL 128 (290)
T ss_dssp HHHHHHHHHHHHHHH---TTCCEEEEEETHHHHHHHHHHHHHGG--GEEEEEEESCC
T ss_pred cchhhhhhhhhcccc---cccccceecccccchhhhhhhhcChh--hheeeeecccc
Confidence 456777777776653 33589999999999999999999999 79999999864
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.68 E-value=5.6e-16 Score=164.17 Aligned_cols=168 Identities=15% Similarity=0.206 Sum_probs=133.7
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
+++.+++++.|| +|.++++.|++. .++.|+||++||+++.. ... .|..+++.|+++||.|+++|+|+++.+...
T Consensus 11 ~~~~v~~~s~dG~~i~~~l~~p~~~--~~~~Pviv~~HGG~~~~-~~~--~~~~~~~~la~~G~~v~~~d~r~~~~~g~~ 85 (260)
T d2hu7a2 11 GSRLVWVESFDGSRVPTYVLESGRA--PTPGPTVVLVHGGPFAE-DSD--SWDTFAASLAAAGFHVVMPNYRGSTGYGEE 85 (260)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTS--CSSEEEEEEECSSSSCC-CCS--SCCHHHHHHHHHTCEEEEECCTTCSSSCHH
T ss_pred ceEEEEEECCCCCEEEEEEEeCCCC--CCCceEEEEECCCCccC-CCc--cccHHHHHHHhhccccccceeeeccccccc
Confidence 567789999999 899999999763 25678999999954322 222 355678889999999999999999877532
Q ss_pred C------CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC---------
Q psy15208 83 Y------DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW--------- 147 (1027)
Q Consensus 83 ~------~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~--------- 147 (1027)
+ ........|+.++++++.......++.++|+|+||.+++.++..+|+ .+++++..+|.....
T Consensus 86 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~--~~~a~i~~~~~~~~~~~~~~~~~~ 163 (260)
T d2hu7a2 86 WRLKIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPG--LFKAGVAGASVVDWEEMYELSDAA 163 (260)
T ss_dssp HHHTTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTT--SSSEEEEESCCCCHHHHHHTCCHH
T ss_pred cccccccccchhhhhhhcccccccccccccceeeccccccccccccchhccCCc--ccccccccccchhhhhhhcccccc
Confidence 1 12235688999999999987666679999999999999999999998 689999888754310
Q ss_pred -----------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 148 -----------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 148 -----------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
.+.++++|+|++||++|.++|++++..+.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~liihG~~D~~vp~~~~~~~~~~ 217 (260)
T d2hu7a2 164 FRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGE 217 (260)
T ss_dssp HHHHHHHHHCSCHHHHHHTCGGGCGGGCCSCEEEEEETTCSSSCSHHHHHHHHH
T ss_pred cccccccccccccccccccchhhcccccCCCceeeecccCceecHHHHHHHHHH
Confidence 2467789999999999999999998877653
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.68 E-value=4.5e-16 Score=161.93 Aligned_cols=100 Identities=23% Similarity=0.290 Sum_probs=77.8
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--CccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD--SGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~--~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
.|+|||+||++. +. ..|..+++.|+++||+|+++|+||||.|+.... +...++.|+.++++.+. ..+++
T Consensus 23 G~~ivllHG~~~---~~--~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~----~~~~~ 93 (277)
T d1brta_ 23 GQPVVLIHGFPL---SG--HSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLD----LQDAV 93 (277)
T ss_dssp SSEEEEECCTTC---CG--GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT----CCSEE
T ss_pred CCeEEEECCCCC---CH--HHHHHHHHHHHhCCCEEEEEeCCCCCcccccccccchhhhhhhhhhhhhccC----ccccc
Confidence 356899999743 32 247888999999999999999999999985432 45567777777777663 34899
Q ss_pred EEEechhH-HHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 111 LAGFSFGT-FVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 111 LVGhSmGG-~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
|+|||||| .+++.++.++|+ +++++|++++.
T Consensus 94 lvGhS~G~~~~~~~~a~~~p~--~v~~lvl~~~~ 125 (277)
T d1brta_ 94 LVGFSTGTGEVARYVSSYGTA--RIAKVAFLASL 125 (277)
T ss_dssp EEEEGGGHHHHHHHHHHHCST--TEEEEEEESCC
T ss_pred ccccccchhhhhHHHHHhhhc--ccceEEEecCC
Confidence 99999996 556667777888 79999999864
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.68 E-value=9.6e-17 Score=168.68 Aligned_cols=116 Identities=13% Similarity=0.131 Sum_probs=87.0
Q ss_pred EecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCcc
Q psy15208 10 INGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGN 87 (1027)
Q Consensus 10 I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~ 87 (1027)
++..+.++++..+.+++ .|+|||+||++. +. ..|..+++.|++ ||+|+++|+||||.|.... .+.+
T Consensus 12 i~~~g~~i~y~~~G~~~------~p~lvllHG~~~---~~--~~~~~~~~~L~~-~~~vi~~d~~G~G~S~~~~~~~~~~ 79 (291)
T d1bn7a_ 12 VEVLGERMHYVDVGPRD------GTPVLFLHGNPT---SS--YLWRNIIPHVAP-SHRCIAPDLIGMGKSDKPDLDYFFD 79 (291)
T ss_dssp EEETTEEEEEEEESCSS------SSCEEEECCTTC---CG--GGGTTTHHHHTT-TSCEEEECCTTSTTSCCCSCCCCHH
T ss_pred EEECCEEEEEEEeCCCC------CCeEEEECCCCC---CH--HHHHHHHHHHhc-CCEEEEEeCCCCccccccccccchh
Confidence 44444488887776654 467899999853 22 246778888865 9999999999999997532 2334
Q ss_pred chHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 88 GETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
..++|+.++++.+ +..+++|+||||||.+++.++.++|+ ++++++++++.
T Consensus 80 ~~~~~l~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~--~~~~li~~~~~ 129 (291)
T d1bn7a_ 80 DHVRYLDAFIEAL----GLEEVVLVIHDWGSALGFHWAKRNPE--RVKGIACMEFI 129 (291)
T ss_dssp HHHHHHHHHHHHT----TCCSEEEEEEHHHHHHHHHHHHHCGG--GEEEEEEEEEC
T ss_pred HHHHHHhhhhhhh----ccccccccccccccchhHHHHHhCCc--ceeeeeeeccc
Confidence 4566666665544 45589999999999999999999999 79999988743
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.67 E-value=5.8e-16 Score=167.16 Aligned_cols=121 Identities=17% Similarity=0.071 Sum_probs=87.4
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
.++-.+..+|| ++++..+.+++ .|+|||+||++..+.. |... ..+...+|+|+++|+||||.|....
T Consensus 11 ~~~~~i~~~dg~~i~y~~~G~~~------g~pvvllHG~~g~~~~-----~~~~-~~~l~~~~~Vi~~D~rG~G~S~~~~ 78 (313)
T d1azwa_ 11 YQQGSLKVDDRHTLYFEQCGNPH------GKPVVMLHGGPGGGCN-----DKMR-RFHDPAKYRIVLFDQRGSGRSTPHA 78 (313)
T ss_dssp SEEEEEECSSSCEEEEEEEECTT------SEEEEEECSTTTTCCC-----GGGG-GGSCTTTEEEEEECCTTSTTSBSTT
T ss_pred CCCCEEEeCCCcEEEEEEecCCC------CCEEEEECCCCCCccc-----hHHH-hHHhhcCCEEEEEeccccCCCCccc
Confidence 35667888899 68877775433 3567899998542221 2222 2233569999999999999997532
Q ss_pred C----CccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 84 D----SGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 84 ~----~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
. +....+.|+..+++.+ +..+++|+||||||.+++.+|.++|+ ++++++++++.
T Consensus 79 ~~~~~~~~~~~~dl~~~~~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lv~~~~~ 136 (313)
T d1azwa_ 79 DLVDNTTWDLVADIERLRTHL----GVDRWQVFGGSWGSTLALAYAQTHPQ--QVTELVLRGIF 136 (313)
T ss_dssp CCTTCCHHHHHHHHHHHHHHT----TCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCC
T ss_pred cccchhHHHHHHHHHHHHHhh----ccccceeEEecCCcHHHHHHHHHhhh--ceeeeeEeccc
Confidence 2 2334556666665554 45589999999999999999999999 89999999863
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.67 E-value=6.7e-16 Score=161.52 Aligned_cols=125 Identities=12% Similarity=0.038 Sum_probs=88.9
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
.+.-.++++|| +|++..+.+++ .|+|||+||++..+. .|..+...|+ +||+|+++|+||||.|....
T Consensus 11 ~~~~~v~~~dG~~i~y~~~G~~~------g~pvvllHG~~~~~~-----~w~~~~~~l~-~~~~vi~~D~rG~G~S~~~~ 78 (313)
T d1wm1a_ 11 YDSGWLDTGDGHRIYWELSGNPN------GKPAVFIHGGPGGGI-----SPHHRQLFDP-ERYKVLLFDQRGCGRSRPHA 78 (313)
T ss_dssp SEEEEEECSSSCEEEEEEEECTT------SEEEEEECCTTTCCC-----CGGGGGGSCT-TTEEEEEECCTTSTTCBSTT
T ss_pred CcCCEEEeCCCcEEEEEEecCCC------CCeEEEECCCCCccc-----chHHHHHHhh-cCCEEEEEeCCCcccccccc
Confidence 34456888889 88888776544 356899999864332 2445555554 59999999999999997543
Q ss_pred CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 84 DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 84 ~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
........+....+..+....+..+++++|||+||.+++.+|..+|+ +++++++.++.
T Consensus 79 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~--~v~~~v~~~~~ 136 (313)
T d1wm1a_ 79 SLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPE--RVSEMVLRGIF 136 (313)
T ss_dssp CCTTCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG--GEEEEEEESCC
T ss_pred cccccchhhHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHHhh--hheeeeecccc
Confidence 22222223333333333444566689999999999999999999999 79999998753
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.66 E-value=7.3e-16 Score=154.61 Aligned_cols=138 Identities=20% Similarity=0.263 Sum_probs=103.4
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--CCccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--DSGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--~~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
++.|||+||++ ++. ..|..+++.|+++||.|+++|+||||.|.... ........+...++..+... ...+++
T Consensus 11 ~~~vvliHG~~---~~~--~~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 84 (242)
T d1tqha_ 11 ERAVLLLHGFT---GNS--ADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNK-GYEKIA 84 (242)
T ss_dssp SCEEEEECCTT---CCT--HHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHH-TCCCEE
T ss_pred CCeEEEECCCC---CCH--HHHHHHHHHHHHCCCEEEEEeCCCCccccccccccchhHHHHHHHHHHhhhhhc-ccCceE
Confidence 45688999974 333 35889999999999999999999999987422 22334455666666665554 445899
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-------------------------------------------
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------------------------------------------- 147 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------------------------------------------- 147 (1027)
|+||||||.+++.++.++|. ..+++++++....
T Consensus 85 l~G~S~Gg~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (242)
T d1tqha_ 85 VAGLSLGGVFSLKLGYTVPI----EGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLK 160 (242)
T ss_dssp EEEETHHHHHHHHHHTTSCC----SCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSCCTTHH
T ss_pred EEEcchHHHHhhhhcccCcc----cccccccccccccchhHHHHHHHHHHHHHhhhccchhhhHHHHHhhhhhhccchhh
Confidence 99999999999999999876 3455555432100
Q ss_pred -----------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 148 -----------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 148 -----------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
.+..+.+|+|++||++|.++|++.+..+++.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~ 204 (242)
T d1tqha_ 161 ALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIE 204 (242)
T ss_dssp HHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCC
T ss_pred cccccccccccccceeccccceeecccCCccCHHHHHHHHHHcC
Confidence 155678999999999999999999888777653
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.66 E-value=1.2e-15 Score=160.06 Aligned_cols=118 Identities=16% Similarity=0.156 Sum_probs=87.7
Q ss_pred EEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC
Q psy15208 6 KFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDS 85 (1027)
Q Consensus 6 ~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~ 85 (1027)
+...++.++.++++.... ..|+|||+||++. +.. .|..+++.|++ +|+|+++|+||||.|......
T Consensus 9 ~~~~~~~~~~~l~y~~~G--------~gp~vv~lHG~~~---~~~--~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~~ 74 (293)
T d1ehya_ 9 KHYEVQLPDVKIHYVREG--------AGPTLLLLHGWPG---FWW--EWSKVIGPLAE-HYDVIVPDLRGFGDSEKPDLN 74 (293)
T ss_dssp CEEEEECSSCEEEEEEEE--------CSSEEEEECCSSC---CGG--GGHHHHHHHHT-TSEEEEECCTTSTTSCCCCTT
T ss_pred cceEEEECCEEEEEEEEC--------CCCeEEEECCCCC---CHH--HHHHHHHHHhc-CCEEEEecCCcccCCcccccc
Confidence 345677777788765532 2467899999853 322 47889999966 899999999999998753321
Q ss_pred ------ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 86 ------GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 86 ------~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
....+.|+.++++ ..+..+++++||||||.+++.++.++|+ ++.+++++++.
T Consensus 75 ~~~~~~~~~~a~~~~~~~~----~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 132 (293)
T d1ehya_ 75 DLSKYSLDKAADDQAALLD----ALGIEKAYVVGHDFAAIVLHKFIRKYSD--RVIKAAIFDPI 132 (293)
T ss_dssp CGGGGCHHHHHHHHHHHHH----HTTCCCEEEEEETHHHHHHHHHHHHTGG--GEEEEEEECCS
T ss_pred ccccccchhhhhHHHhhhh----hcCccccccccccccccchhcccccCcc--ccceeeeeecc
Confidence 1233444444443 4455689999999999999999999999 79999999874
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.64 E-value=9.1e-16 Score=160.07 Aligned_cols=118 Identities=20% Similarity=0.260 Sum_probs=85.7
Q ss_pred EEEEecCCc---eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 7 FFNINGSVG---ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 7 ~i~I~t~dG---~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
++++.+.++ +|++..+. ..|+|||+||++. +. ..|..+++.|.++||+|+++|+||||.|+...
T Consensus 2 ~~~~~~~~~~~v~i~y~~~G--------~g~~illlHG~~~---~~--~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~ 68 (279)
T d1hkha_ 2 YITVGNENSTPIELYYEDQG--------SGQPVVLIHGYPL---DG--HSWERQTRELLAQGYRVITYDRRGFGGSSKVN 68 (279)
T ss_dssp EEEEEEETTEEEEEEEEEES--------SSEEEEEECCTTC---CG--GGGHHHHHHHHHTTEEEEEECCTTSTTSCCCS
T ss_pred EEEEecCCCCeEEEEEEEEc--------cCCeEEEECCCCC---CH--HHHHHHHHHHHHCCCEEEEEechhhCCccccc
Confidence 355555554 55554432 2366899999743 22 24778888888899999999999999998542
Q ss_pred --CCccchHHHHHHHHHHHHHhCCCCcEEEEEechhH-HHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 84 --DSGNGETDDMEILLRYIQKKYPYLPIILAGFSFGT-FVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 84 --~~~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG-~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
.+.+..++|+.++++.+ +..+++|+|||||| .+++.++..+|+ ++.+++++++.
T Consensus 69 ~~~~~~~~~~di~~~i~~l----~~~~~~lvGhS~Gg~~~a~~~a~~~p~--~v~~lvli~~~ 125 (279)
T d1hkha_ 69 TGYDYDTFAADLHTVLETL----DLRDVVLVGFSMGTGELARYVARYGHE--RVAKLAFLASL 125 (279)
T ss_dssp SCCSHHHHHHHHHHHHHHH----TCCSEEEEEETHHHHHHHHHHHHHCST--TEEEEEEESCC
T ss_pred cccchhhhhhhhhhhhhhc----CcCccccccccccccchhhhhcccccc--ccceeEEeecc
Confidence 23456677777777765 34489999999996 566667777788 79999999864
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.64 E-value=9.7e-16 Score=159.02 Aligned_cols=116 Identities=22% Similarity=0.235 Sum_probs=84.5
Q ss_pred EEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--C
Q psy15208 9 NINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD--S 85 (1027)
Q Consensus 9 ~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~--~ 85 (1027)
++.+.|| ++++..+. + .|+|||+||++. +.. .|..+++.|.++||+|+++|+||||.|+.... +
T Consensus 2 ~f~~~dG~~i~y~~~G-~-------g~pvvllHG~~~---~~~--~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~ 68 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDWG-S-------GQPIVFSHGWPL---NAD--SWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGND 68 (273)
T ss_dssp EEECTTSCEEEEEEES-C-------SSEEEEECCTTC---CGG--GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCS
T ss_pred EEEeeCCcEEEEEEEC-C-------CCeEEEECCCCC---CHH--HHHHHHHHHHhCCCEEEEEechhcCcccccccccc
Confidence 4778899 68776553 1 245789999843 322 47889999999999999999999999986432 3
Q ss_pred ccchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHH-HHhcCCcCCccEEEEEccC
Q psy15208 86 GNGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKL-QKRLDKEISIKILILISVA 143 (1027)
Q Consensus 86 ~~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~-A~~~p~~~~V~gLVli~p~ 143 (1027)
....++|+.++++.+ ...+.+++|||+||.++..+ +..+|+ ++.+++++++.
T Consensus 69 ~~~~~~~~~~~l~~l----~~~~~~lvg~s~gG~~~~~~~a~~~p~--~v~~~~l~~~~ 121 (273)
T d1a8sa_ 69 MDTYADDLAQLIEHL----DLRDAVLFGFSTGGGEVARYIGRHGTA--RVAKAGLISAV 121 (273)
T ss_dssp HHHHHHHHHHHHHHT----TCCSEEEEEETHHHHHHHHHHHHHCST--TEEEEEEESCC
T ss_pred ccchHHHHHHHHHhc----CccceeeeeeccCCccchhhhhhhhhh--ccceeEEEecc
Confidence 345666666666544 44478999999988765555 555677 79999999864
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.63 E-value=1.2e-15 Score=152.47 Aligned_cols=141 Identities=20% Similarity=0.154 Sum_probs=103.6
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEEe
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGF 114 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGh 114 (1027)
.|||+||++ |+..+.++..+++.|+++||.|+++|+||+|.+. ..|....++.+... ...+++|+||
T Consensus 3 ~V~~vHG~~---~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~~---------~~~~~~~l~~~~~~-~~~~~~lvGh 69 (186)
T d1uxoa_ 3 QVYIIHGYR---ASSTNHWFPWLKKRLLADGVQADILNMPNPLQPR---------LEDWLDTLSLYQHT-LHENTYLVAH 69 (186)
T ss_dssp EEEEECCTT---CCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCC---------HHHHHHHHHTTGGG-CCTTEEEEEE
T ss_pred EEEEECCCC---CCcchhHHHHHHHHHHhCCCEEEEeccCCCCcch---------HHHHHHHHHHHHhc-cCCCcEEEEe
Confidence 479999984 4443345778999999999999999999998653 23332223322223 3457999999
Q ss_pred chhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC-----------------CCCCCCcEEEEEeCCCCCCChHHHHhhhC
Q psy15208 115 SFGTFVQAKLQKRLDKEISIKILILISVAVKKWL-----------------IPEVPKNTIIIHGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 115 SmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~-----------------l~~i~~PvLiIhG~~D~iVP~~~~~~l~~ 177 (1027)
||||.+++.++.++|....+.+++..+++..... ......|++++||++|+++|++.++.+++
T Consensus 70 S~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lvi~g~~D~~vp~~~~~~l~~ 149 (186)
T d1uxoa_ 70 SLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQMLDEFTQGSFDHQKIIESAKHRAVIASKDDQIVPFSFSKDLAQ 149 (186)
T ss_dssp TTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGGGGGGTCSCCCHHHHHHHEEEEEEEEETTCSSSCHHHHHHHHH
T ss_pred chhhHHHHHHHHhCCccceeeEEeecccccccchhhhhhhhhhcccccccccccCCCCEEEEecCCCCCCCHHHHHHHHH
Confidence 9999999999999998555677777776543221 11345899999999999999999998888
Q ss_pred CCCCceEeecc
Q psy15208 178 PLDIPVVVIPE 188 (1027)
Q Consensus 178 ~~~~~~L~t~E 188 (1027)
.++...+..++
T Consensus 150 ~~~~~~~~~~~ 160 (186)
T d1uxoa_ 150 QIDAALYEVQH 160 (186)
T ss_dssp HTTCEEEEETT
T ss_pred HcCCEEEEeCC
Confidence 77665555554
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.63 E-value=1.7e-15 Score=156.27 Aligned_cols=115 Identities=22% Similarity=0.244 Sum_probs=82.9
Q ss_pred EecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--Cc
Q psy15208 10 INGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD--SG 86 (1027)
Q Consensus 10 I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~--~~ 86 (1027)
+.+.|| +|++..+. + .|+|||+||++. +. ..|..+++.|+++||+|+++|+||||.|+.... +.
T Consensus 3 f~~~dG~~l~y~~~G-~-------g~~vv~lHG~~~---~~--~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~ 69 (271)
T d1va4a_ 3 FVAKDGTQIYFKDWG-S-------GKPVLFSHGWLL---DA--DMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDY 69 (271)
T ss_dssp EECTTSCEEEEEEES-S-------SSEEEEECCTTC---CG--GGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSH
T ss_pred EEeECCeEEEEEEEc-C-------CCeEEEECCCCC---CH--HHHHHHHHHHHhCCCEEEEEecccccccccccccccc
Confidence 556777 67765442 1 245789999743 32 247889999999999999999999999986432 33
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHH-HHHHhcCCcCCccEEEEEccC
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQA-KLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl-~~A~~~p~~~~V~gLVli~p~ 143 (1027)
+..+.|+..+++.+ +..+++++|||+||.++. .++.++|+ ++.+++++++.
T Consensus 70 ~~~~~~~~~~~~~~----~~~~~~~vg~s~gG~~~~~~~a~~~p~--~v~~~v~~~~~ 121 (271)
T d1va4a_ 70 DTFADDIAQLIEHL----DLKEVTLVGFSMGGGDVARYIARHGSA--RVAGLVLLGAV 121 (271)
T ss_dssp HHHHHHHHHHHHHH----TCCSEEEEEETTHHHHHHHHHHHHCST--TEEEEEEESCC
T ss_pred ccccccceeeeeec----CCCcceeeccccccccccccccccccc--eeeEEEeeccc
Confidence 45566666555544 344789999999887655 45666777 79999999864
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.62 E-value=7.6e-16 Score=159.77 Aligned_cols=138 Identities=17% Similarity=0.220 Sum_probs=101.0
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
.+++|||+||++. +. ..|..+++.|++ +|+|+++|+||||.|.... ... ..|. ++.+... ...++++
T Consensus 10 g~~~lvllHG~~~---~~--~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~--~~~-~~d~---~~~~~~~-~~~~~~l 76 (256)
T d1m33a_ 10 GNVHLVLLHGWGL---NA--EVWRCIDEELSS-HFTLHLVDLPGFGRSRGFG--ALS-LADM---AEAVLQQ-APDKAIW 76 (256)
T ss_dssp CSSEEEEECCTTC---CG--GGGGGTHHHHHT-TSEEEEECCTTSTTCCSCC--CCC-HHHH---HHHHHTT-SCSSEEE
T ss_pred CCCeEEEECCCCC---CH--HHHHHHHHHHhC-CCEEEEEeCCCCCCccccc--ccc-cccc---ccccccc-cccceee
Confidence 3567899999853 22 247788899974 8999999999999998542 122 2332 3333333 3457999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEccCCCc-----C---------------------------------------
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISVAVKK-----W--------------------------------------- 147 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~-----~--------------------------------------- 147 (1027)
+||||||.+++.+|.++|+ .+++++++++.+.. +
T Consensus 77 ~GhS~Gg~ia~~~a~~~p~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (256)
T d1m33a_ 77 LGWSLGGLVASQIALTHPE--RVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQ 154 (256)
T ss_dssp EEETHHHHHHHHHHHHCGG--GEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTHHH
T ss_pred eecccchHHHHHHHHhCCc--ccceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHhhhhhccccchhh
Confidence 9999999999999999998 78999998753210 0
Q ss_pred ----------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceE
Q psy15208 148 ----------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVV 184 (1027)
Q Consensus 148 ----------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L 184 (1027)
.+..+++|+++++|++|.++|++....+.+..+...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~l~~~~~~~~~ 225 (256)
T d1m33a_ 155 DARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSES 225 (256)
T ss_dssp HHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCTTCEE
T ss_pred HHHHHHHhhhhcchhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCCHHHHHHHHHHCCCCEE
Confidence 1456789999999999999999988877776554433
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.62 E-value=2e-15 Score=156.06 Aligned_cols=161 Identities=20% Similarity=0.187 Sum_probs=110.5
Q ss_pred CCCceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q psy15208 1 MISNTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASS 80 (1027)
Q Consensus 1 M~m~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~ 80 (1027)
|.++++++++.+ +.+....|++ ++|+||++||+ +++.. .|..+++.|+++||.|+++|+||||.|.
T Consensus 1 ~~~~~~~~~l~g----~~~~~~~p~~-----~~~~vl~lHG~---~~~~~--~~~~~~~~la~~G~~V~~~D~~g~g~s~ 66 (238)
T d1ufoa_ 1 MRVRTERLTLAG----LSVLARIPEA-----PKALLLALHGL---QGSKE--HILALLPGYAERGFLLLAFDAPRHGERE 66 (238)
T ss_dssp CCEEEEEEEETT----EEEEEEEESS-----CCEEEEEECCT---TCCHH--HHHHTSTTTGGGTEEEEECCCTTSTTSS
T ss_pred CEEEEEEEEECC----EEEEecCCCC-----CCeEEEEeCCC---CCCHH--HHHHHHHHHHHCCCEEEEecCCCCCCCc
Confidence 667788777754 4555666754 57999999997 34433 4778999999999999999999999997
Q ss_pred CCCCCc------cchH----HHHHHHHHHHHH--hCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-
Q psy15208 81 GTYDSG------NGET----DDMEILLRYIQK--KYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW- 147 (1027)
Q Consensus 81 g~~~~~------~~~~----~Dv~avl~~L~~--~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~- 147 (1027)
...... .... .++..+...+.. .....++.++||||||.+++.++..+|+ +.+++.+.+.....
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~---~~~~~~~~~~~~~~~ 143 (238)
T d1ufoa_ 67 GPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFR---PRGVLAFIGSGFPMK 143 (238)
T ss_dssp CCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCC---CSCEEEESCCSSCCC
T ss_pred ccccccccchhhhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcc---hhheeeeeeeccccc
Confidence 543211 1111 122222222221 1123479999999999999999999886 55555544332111
Q ss_pred -----------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 148 -----------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 148 -----------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
.....+.|++++||++|.++|++.+..+++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~ 197 (238)
T d1ufoa_ 144 LPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEA 197 (238)
T ss_dssp CCTTCCCCCHHHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHH
T ss_pred cccccccccccccchhhhhhhhhhhhhcCCCeEEEEcCCCCccCHHHHHHHHHH
Confidence 0123468999999999999999998776653
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.61 E-value=5.8e-15 Score=159.58 Aligned_cols=167 Identities=18% Similarity=0.053 Sum_probs=125.4
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
+.+++++++.+| +++++++.|++. .++.|+||++||++...+. ......|+++||.|+++|+||||.|.+.
T Consensus 54 ~~~~v~~~s~dG~~l~~~l~~P~~~--~~~~P~Vv~~hG~~~~~~~------~~~~~~~a~~G~~v~~~D~rG~G~s~~~ 125 (322)
T d1vlqa_ 54 EAYDVTFSGYRGQRIKGWLLVPKLE--EEKLPCVVQYIGYNGGRGF------PHDWLFWPSMGYICFVMDTRGQGSGWLK 125 (322)
T ss_dssp EEEEEEEECGGGCEEEEEEEEECCS--CSSEEEEEECCCTTCCCCC------GGGGCHHHHTTCEEEEECCTTCCCSSSC
T ss_pred EEEEEEEECCCCcEEEEEEEeccCC--CCCccEEEEecCCCCCcCc------HHHHHHHHhCCCEEEEeeccccCCCCCC
Confidence 346788999988 899999999762 3567999999997543222 1234467889999999999999998642
Q ss_pred CCC---------------------------ccchHHHHHHHHHHHHHhCCC--CcEEEEEechhHHHHHHHHHhcCCcCC
Q psy15208 83 YDS---------------------------GNGETDDMEILLRYIQKKYPY--LPIILAGFSFGTFVQAKLQKRLDKEIS 133 (1027)
Q Consensus 83 ~~~---------------------------~~~~~~Dv~avl~~L~~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~ 133 (1027)
... ......|+..+++++..+... .++.++|+|+||.+++.++...|.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~~--- 202 (322)
T d1vlqa_ 126 GDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKK--- 202 (322)
T ss_dssp CCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCSS---
T ss_pred ccccccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCCC---
Confidence 100 012457888888888776432 359999999999999998888764
Q ss_pred ccEEEEEccCCCcC----------------------------------------CCCCCCCcEEEEEeCCCCCCChHHHH
Q psy15208 134 IKILILISVAVKKW----------------------------------------LIPEVPKNTIIIHGELDEIIPLKDVF 173 (1027)
Q Consensus 134 V~gLVli~p~~~~~----------------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~ 173 (1027)
+++++...+....+ .+.++++|+|++||++|.++|++.+.
T Consensus 203 ~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~~ 282 (322)
T d1vlqa_ 203 AKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVF 282 (322)
T ss_dssp CCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHH
T ss_pred ccEEEEeCCccccHHHHHhhccccchhhHHhhhhcCcchhhhHHHHhhhhhHHHHHhcCCCCEEEEEeCCCCCcCHHHHH
Confidence 88888877643211 14578999999999999999999998
Q ss_pred hhhCCCCC
Q psy15208 174 LWANPLDI 181 (1027)
Q Consensus 174 ~l~~~~~~ 181 (1027)
.+.+.+..
T Consensus 283 ~~~~~~~~ 290 (322)
T d1vlqa_ 283 AAYNYYAG 290 (322)
T ss_dssp HHHHHCCS
T ss_pred HHHHHCCC
Confidence 77776553
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.57 E-value=1.8e-14 Score=149.69 Aligned_cols=118 Identities=11% Similarity=0.041 Sum_probs=84.8
Q ss_pred EecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC--c-
Q psy15208 10 INGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDS--G- 86 (1027)
Q Consensus 10 I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~--~- 86 (1027)
++..+.++++..+. ..|+|||+||++. +. ..|..+++.|++ +|+|+++|+||||.|...... .
T Consensus 13 i~~~g~~i~y~~~G--------~g~~vvllHG~~~---~~--~~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~ 78 (298)
T d1mj5a_ 13 IEIKGRRMAYIDEG--------TGDPILFQHGNPT---SS--YLWRNIMPHCAG-LGRLIACDLIGMGDSDKLDPSGPER 78 (298)
T ss_dssp EEETTEEEEEEEES--------CSSEEEEECCTTC---CG--GGGTTTGGGGTT-SSEEEEECCTTSTTSCCCSSCSTTS
T ss_pred EEECCEEEEEEEEc--------CCCcEEEECCCCC---CH--HHHHHHHHHHhc-CCEEEEEeCCCCCCCCCCccccccc
Confidence 44434477765442 2367899999853 32 247778888875 799999999999999864321 1
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
.....+...+...+.......+++++||||||.+++.++.++|+ ++.+++++++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~l~~~~~~ 133 (298)
T d1mj5a_ 79 YAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRE--RVQGIAYMEAI 133 (298)
T ss_dssp SCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGG--GEEEEEEEEEC
T ss_pred cccchhhhhhccccccccccccCeEEEecccchhHHHHHHHHHh--hhheeeccccc
Confidence 22334444455555555566789999999999999999999999 79999988754
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.55 E-value=6.5e-15 Score=149.54 Aligned_cols=102 Identities=15% Similarity=0.063 Sum_probs=70.4
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
.+|+|||+||++. +. ..|..+++.|++.||+|+++|+||||.|................. ..+.......++++
T Consensus 15 ~~P~ivllHG~~~---~~--~~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 88 (264)
T d1r3da_ 15 RTPLVVLVHGLLG---SG--ADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQ-TVQAHVTSEVPVIL 88 (264)
T ss_dssp TBCEEEEECCTTC---CG--GGGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHHH-HHHTTCCTTSEEEE
T ss_pred CCCeEEEeCCCCC---CH--HHHHHHHHHHHhCCCEEEEEecccccccccccccccchhhhhhhh-cccccccccCceee
Confidence 5688999999743 32 248899999998899999999999999986432211111111111 11222334568999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEc
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILIS 141 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~ 141 (1027)
+||||||.+++.++.++|+ .+.+++...
T Consensus 89 vGhS~Gg~ia~~~a~~~~~--~~~~~~~~~ 116 (264)
T d1r3da_ 89 VGYSLGGRLIMHGLAQGAF--SRLNLRGAI 116 (264)
T ss_dssp EEETHHHHHHHHHHHHTTT--TTSEEEEEE
T ss_pred eeecchHHHHHHHHHhCch--hcccccccc
Confidence 9999999999999999998 566666554
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.54 E-value=3.9e-14 Score=150.98 Aligned_cols=143 Identities=16% Similarity=0.185 Sum_probs=113.2
Q ss_pred ceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHH
Q psy15208 15 GILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDME 94 (1027)
Q Consensus 15 G~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~ 94 (1027)
|...+.+|.|.+. ..++.|+|||+||++ ++.. .+..+++.|+++||.|+++|++|++... .....|+.
T Consensus 35 g~~~~~ly~P~~~-~~g~~P~Vv~~HG~~---g~~~--~~~~~a~~lA~~Gy~V~~~d~~~~~~~~------~~~~~d~~ 102 (260)
T d1jfra_ 35 GFGGGTIYYPTST-ADGTFGAVVISPGFT---AYQS--SIAWLGPRLASQGFVVFTIDTNTTLDQP------DSRGRQLL 102 (260)
T ss_dssp SSCCEEEEEESCC-TTCCEEEEEEECCTT---CCGG--GTTTHHHHHHTTTCEEEEECCSSTTCCH------HHHHHHHH
T ss_pred cccCEEEEEcCCC-CCCCccEEEEECCCC---CCHH--HHHHHHHHHHhCCCEEEEEeeCCCcCCc------hhhHHHHH
Confidence 3444567778642 134679999999973 4443 3567899999999999999999876543 23577888
Q ss_pred HHHHHHHHhCC------CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCCCCCCCCcEEEEEeCCCCCCC
Q psy15208 95 ILLRYIQKKYP------YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWLIPEVPKNTIIIHGELDEIIP 168 (1027)
Q Consensus 95 avl~~L~~~~~------~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~l~~i~~PvLiIhG~~D~iVP 168 (1027)
.+++++..... ..++.++||||||.+++.++...+. +.++|.+++.........+.+|+|++||++|.++|
T Consensus 103 ~~~~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~~---~~A~v~~~~~~~~~~~~~~~~P~l~i~G~~D~~vp 179 (260)
T d1jfra_ 103 SALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS---LKAAIPLTGWNTDKTWPELRTPTLVVGADGDTVAP 179 (260)
T ss_dssp HHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT---CSEEEEESCCCSCCCCTTCCSCEEEEEETTCSSSC
T ss_pred HHHHHHHhhhhhhccccccceEEEeccccchHHHHHHhhhcc---chhheeeecccccccccccccceeEEecCCCCCCC
Confidence 88888877432 3469999999999999999998775 89999999887777788899999999999999999
Q ss_pred hHHH
Q psy15208 169 LKDV 172 (1027)
Q Consensus 169 ~~~~ 172 (1027)
++..
T Consensus 180 ~~~~ 183 (260)
T d1jfra_ 180 VATH 183 (260)
T ss_dssp TTTT
T ss_pred HHHH
Confidence 8653
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.52 E-value=1.3e-13 Score=145.19 Aligned_cols=172 Identities=15% Similarity=0.097 Sum_probs=120.6
Q ss_pred CceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCC--CCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCC
Q psy15208 3 SNTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPL--FGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGAS 79 (1027)
Q Consensus 3 m~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~--~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S 79 (1027)
|+.+++.+...+| ++++.++.|++.+..++.|+||++||++. .+.... .+......++++||.|+.+|+||++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~--~~~~~~~~~a~~g~~V~~~d~rg~~~~ 78 (258)
T d2bgra2 1 MPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVF--RLNWATYLASTENIIVASFDGRGSGYQ 78 (258)
T ss_dssp CCEEEEEEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCC--CCSHHHHHHHTTCCEEEEECCTTCSSS
T ss_pred CCceeEEEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCcc--CcCHHHHHHhcCCcEEEeecccccCCc
Confidence 5677788887777 89999999987443355699999999521 111111 112234457789999999999998765
Q ss_pred CCCC-----CC-ccchHHHHHHHHHHHHHhCCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC----
Q psy15208 80 SGTY-----DS-GNGETDDMEILLRYIQKKYPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---- 147 (1027)
Q Consensus 80 ~g~~-----~~-~~~~~~Dv~avl~~L~~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---- 147 (1027)
...+ .. ......|..++++++...... .++.++|+|+||.+++.++..+|+ .....+..++.....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 156 (258)
T d2bgra2 79 GDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSG--VFKCGIAVAPVSRWEYYDS 156 (258)
T ss_dssp CHHHHGGGTTCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCS--CCSEEEEESCCCCGGGSBH
T ss_pred chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCC--cceEEEEeecccccccccc
Confidence 4211 11 123567777888888765432 359999999999999999999998 566666666532211
Q ss_pred --------------------------CCCCC-CCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 148 --------------------------LIPEV-PKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 148 --------------------------~l~~i-~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
...++ .+|++++||++|..||+.++.+++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~ 214 (258)
T d2bgra2 157 VYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKA 214 (258)
T ss_dssp HHHHHHHCCCSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHH
T ss_pred cccchhcccccchhhHHHhhcccccccccccccCChheeeecCCCcccHHHHHHHHHH
Confidence 02222 37999999999999999998877654
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=2.1e-13 Score=143.77 Aligned_cols=169 Identities=15% Similarity=0.096 Sum_probs=113.2
Q ss_pred EEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC------C
Q psy15208 9 NINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG------T 82 (1027)
Q Consensus 9 ~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g------~ 82 (1027)
.++..+-.|+++++.|++....++.|+||++||++.................|+++||.|+++|+||.+.+.. .
T Consensus 7 ~i~~dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~~~~ 86 (258)
T d1xfda2 7 DIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVR 86 (258)
T ss_dssp CEEETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTT
T ss_pred EEeeCCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhHhhhhh
Confidence 3444333899999999864333556999999996322111111111223456889999999999998654321 1
Q ss_pred CCCccchHHHHHHHHHHHHHhCCC--CcEEEEEechhHHHHHHHHHhcCCc--CCccEEEEEccCCCcC-----------
Q psy15208 83 YDSGNGETDDMEILLRYIQKKYPY--LPIILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVAVKKW----------- 147 (1027)
Q Consensus 83 ~~~~~~~~~Dv~avl~~L~~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~~~~~----------- 147 (1027)
.........|+.++++++.++... ++++++|||+||.+++.++...++. ..+...+...+.....
T Consensus 87 ~~~g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (258)
T d1xfda2 87 RRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYL 166 (258)
T ss_dssp TCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHHHHHHH
T ss_pred ccchhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeeccccccccccc
Confidence 111234688999999999886543 4699999999999999888776652 1356666666532210
Q ss_pred ----------C-------CCC-CCCcEEEEEeCCCCCCChHHHHhhhC
Q psy15208 148 ----------L-------IPE-VPKNTIIIHGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 148 ----------~-------l~~-i~~PvLiIhG~~D~iVP~~~~~~l~~ 177 (1027)
. +.. ..+|+|++||+.|..+|++++.++.+
T Consensus 167 ~~~~~~~~~~~~~s~~~~~~~~~~~p~Li~hG~~D~~vp~~~s~~~~~ 214 (258)
T d1xfda2 167 GLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELIT 214 (258)
T ss_dssp CCCSSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHH
T ss_pred cccccchHHhhccchhhhhhhhhcccccccccCCCCCcCHHHHHHHHH
Confidence 0 112 36899999999999999999876654
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.44 E-value=6e-13 Score=133.57 Aligned_cols=131 Identities=13% Similarity=0.030 Sum_probs=101.5
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEEEe
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILAGF 114 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLVGh 114 (1027)
+|||+||++ ++.. .|..+++.|.++||.++.+|++|++.+.+.. ....+++...++.+....+..+++|+||
T Consensus 4 PVv~vHG~~---~~~~--~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~---~~~~~~l~~~i~~~~~~~~~~~v~lvGH 75 (179)
T d1ispa_ 4 PVVMVHGIG---GASF--NFAGIKSYLVSQGWSRDKLYAVDFWDKTGTN---YNNGPVLSRFVQKVLDETGAKKVDIVAH 75 (179)
T ss_dssp CEEEECCTT---CCGG--GGHHHHHHHHHTTCCGGGEEECCCSCTTCCH---HHHHHHHHHHHHHHHHHHCCSCEEEEEE
T ss_pred CEEEECCCC---CCHH--HHHHHHHHHHHcCCeEEEEecCCcccccccc---chhhhhHHHHHHHHHHhcCCceEEEEee
Confidence 468899984 3332 4889999999999999999999999887542 2345666667777666667778999999
Q ss_pred chhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-------CCCCCCCcEEEEEeCCCCCCChHHHH
Q psy15208 115 SFGTFVQAKLQKRLDKEISIKILILISVAVKKW-------LIPEVPKNTIIIHGELDEIIPLKDVF 173 (1027)
Q Consensus 115 SmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~-------~l~~i~~PvLiIhG~~D~iVP~~~~~ 173 (1027)
||||.++..++.+++...+|+++|+++++.... .......|++.++|..|.++|+..+.
T Consensus 76 SmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~~~l~~~~~~~~~~~~~i~~~~D~~v~~~~~~ 141 (179)
T d1ispa_ 76 SMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKALPGTDPNQKILYTSIYSSADMIVMNYLSR 141 (179)
T ss_dssp THHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSBCCCCSCTTCCCEEEEEEETTCSSSCHHHHC
T ss_pred cCcCHHHHHHHHHcCCchhhCEEEEECCCCCCchhhhcCCcccccCceEEEEEecCCcccCchhhc
Confidence 999999999998875333799999999764321 12345689999999999999997653
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.44 E-value=3.6e-13 Score=143.99 Aligned_cols=169 Identities=16% Similarity=0.118 Sum_probs=126.6
Q ss_pred EEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCc
Q psy15208 8 FNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSG 86 (1027)
Q Consensus 8 i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~ 86 (1027)
+.+...++ ....-+|.|++ .++|+|||+||++|..++..+ +..+++.|+++||.|+.+|+|..+.. ++
T Consensus 40 ~dv~Yg~~~~~~lDiy~P~~----~~~P~vv~iHGG~w~~g~~~~--~~~~a~~l~~~G~~Vv~~~YRl~p~~-----~~ 108 (261)
T d2pbla1 40 LNLSYGEGDRHKFDLFLPEG----TPVGLFVFVHGGYWMAFDKSS--WSHLAVGALSKGWAVAMPSYELCPEV-----RI 108 (261)
T ss_dssp EEEESSSSTTCEEEEECCSS----SCSEEEEEECCSTTTSCCGGG--CGGGGHHHHHTTEEEEEECCCCTTTS-----CH
T ss_pred CCcCCCCCcCeEEEEeccCC----CCCCeEEEECCCCCccCChhH--hhhHHHHHhcCCceeecccccccccc-----cC
Confidence 45554344 34455778876 468999999998887776553 55688999999999999999964432 44
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCC----cCCccEEEEEccCCCc----------------
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDK----EISIKILILISVAVKK---------------- 146 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~----~~~V~gLVli~p~~~~---------------- 146 (1027)
....+|+...++|+..+.+ .+++|+|||.||.++..++..... ...+++++.+++....
T Consensus 109 p~~~~d~~~a~~~~~~~~~-~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (261)
T d2pbla1 109 SEITQQISQAVTAAAKEID-GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSMNEKFKMDA 187 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSC-SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGSTTHHHHCCCH
T ss_pred chhHHHHHHHHHHHHhccc-CceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhhhhhcccccCCH
Confidence 5679999999999999876 489999999999999877654322 1247888888874321
Q ss_pred ---------CCCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCCCceEeecc
Q psy15208 147 ---------WLIPEVPKNTIIIHGELDEIIPLKDVFLWANPLDIPVVVIPE 188 (1027)
Q Consensus 147 ---------~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~~~~L~t~E 188 (1027)
........|++++||++|..++..++..+.+.++...+..++
T Consensus 188 ~~~~~~SP~~~~~~~~~P~li~~G~~D~~~~~~qs~~~~~~l~~~~~~~~~ 238 (261)
T d2pbla1 188 DAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWDADHVIAFE 238 (261)
T ss_dssp HHHHHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHTCEEEEETT
T ss_pred HHHHHhCchhhcccCCCeEEEEEecCCCchHHHHHHHHHHHhCCCceEeCC
Confidence 024556799999999999988888888888776665555544
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.42 E-value=5.7e-13 Score=139.14 Aligned_cols=161 Identities=18% Similarity=0.214 Sum_probs=118.8
Q ss_pred CceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q psy15208 3 SNTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG 81 (1027)
Q Consensus 3 m~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g 81 (1027)
|.++.+.+++.|| ++.+++..|.+ ++.|+||++|+. .|. +...+.+++.|+++||.|+++|+.+.+....
T Consensus 1 ~~~e~v~~~~~dg~~~~a~~~~P~~----~~~P~vl~~h~~---~G~--~~~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~ 71 (233)
T d1dina_ 1 MLTEGISIQSYDGHTFGALVGSPAK----APAPVIVIAQEI---FGV--NAFMRETVSWLVDQGYAAVCPDLYARQAPGT 71 (233)
T ss_dssp CCCTTCCEECTTSCEECEEEECCSS----SSEEEEEEECCT---TBS--CHHHHHHHHHHHHTTCEEEEECGGGGTSTTC
T ss_pred CcceEEEEEcCCCCEEEEEEECCCC----CCceEEEEeCCC---CCC--CHHHHHHHHHHHhcCCcceeeeeccCCCcCc
Confidence 3455688999998 89999999976 578999999964 222 2346788999999999999999977665443
Q ss_pred CCC-----------------CccchHHHHHHHHHHHHHhC-CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 82 TYD-----------------SGNGETDDMEILLRYIQKKY-PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 82 ~~~-----------------~~~~~~~Dv~avl~~L~~~~-~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
... +......|+.+.++++.... ...++.++|+|+||.+++.++... .+.+.+...+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~----~~~~~~~~~~~ 147 (233)
T d1dina_ 72 ALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKG----YVDRAVGYYGV 147 (233)
T ss_dssp BCCTTSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHT----CSSEEEEESCS
T ss_pred ccChHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeeccccc----ccceecccccc
Confidence 211 12234677888888887642 234799999999999999988763 25666665543
Q ss_pred CC-c--CCCCCCCCcEEEEEeCCCCCCChHHHHhhh
Q psy15208 144 VK-K--WLIPEVPKNTIIIHGELDEIIPLKDVFLWA 176 (1027)
Q Consensus 144 ~~-~--~~l~~i~~PvLiIhG~~D~iVP~~~~~~l~ 176 (1027)
.. . .....+++|++++||++|+.+|++....+.
T Consensus 148 ~~~~~~~~~~~i~~Pvl~~~G~~D~~vp~e~~~~~~ 183 (233)
T d1dina_ 148 GLEKQLNKVPEVKHPALFHMGGQDHFVPAPSRQLIT 183 (233)
T ss_dssp CGGGGGGGGGGCCSCEEEEEETTCTTSCHHHHHHHH
T ss_pred ccccchhhhhccCCcceeeecccccCCCHHHHHHHH
Confidence 32 2 235678899999999999999999877543
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=99.42 E-value=1.5e-13 Score=141.43 Aligned_cols=114 Identities=18% Similarity=0.218 Sum_probs=91.9
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEe
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVT 871 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~ 871 (1027)
.+++.|+.-....+..+.||+|+|+|||.||+.+|+++++|||+|+++|+.+... ....+...++++.++.+|+|+.
T Consensus 27 ~~~g~w~~~~~~~~~~l~~ktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~---~~~~~~~~~l~~l~~~~D~v~~ 103 (199)
T d1dxya1 27 LQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG---DHPDFDYVSLEDLFKQSDVIDL 103 (199)
T ss_dssp HHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS---CCTTCEECCHHHHHHHCSEEEE
T ss_pred HHhCCCCcccCcccccccceeeeeeecccccccccccccccceeeeccCCccchh---hhcchhHHHHHHHHHhccccee
Confidence 4455565322223567999999999999999999999999999999998766432 3345677899999999999987
Q ss_pred cCC----CcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 872 CTG----NYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 872 atG----~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++. ++++|+++.|++||+|+++||+|.... +|.++|.
T Consensus 104 ~~plt~~T~~li~~~~l~~mk~~a~lIN~aRG~v-vde~aL~ 144 (199)
T d1dxya1 104 HVPGIEQNTHIINEAAFNLMKPGAIVINTARPNL-IDTQAML 144 (199)
T ss_dssp CCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTS-BCHHHHH
T ss_pred eecccccccccccHHHhhccCCceEEEecccHhh-hhhHHHH
Confidence 653 568999999999999999999999854 6666664
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=99.40 E-value=2.4e-13 Score=139.17 Aligned_cols=103 Identities=22% Similarity=0.254 Sum_probs=86.5
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCC----CcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTG----NYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG----~~~vi 879 (1027)
+..+.||+|+|+|+|.||+.+|+++++|||+|+++|..+..... ...++. +.+++++++.+|+|+.+++ +.+++
T Consensus 44 ~~eL~gktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-~~~~~~~~~~l~~ll~~sD~i~~~~plt~~T~~li 122 (193)
T d1mx3a1 44 AARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVE-RALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLI 122 (193)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTHH-HHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSB
T ss_pred ceeeeCceEEEeccccccccceeeeeccccceeeccCcccccch-hhhccccccchhhccccCCEEEEeecccccchhhh
Confidence 56799999999999999999999999999999999887654433 334554 5679999999999987653 67899
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+.+.|++||+++++||+|.... +|.++|.
T Consensus 123 ~~~~l~~mk~~a~lIN~sRG~i-vde~aL~ 151 (193)
T d1mx3a1 123 NDFTVKQMRQGAFLVNTARGGL-VDEKALA 151 (193)
T ss_dssp SHHHHTTSCTTEEEEECSCTTS-BCHHHHH
T ss_pred hHHHHhccCCCCeEEecCCceE-EcHHHHH
Confidence 9999999999999999999854 5666664
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.40 E-value=3.4e-12 Score=129.03 Aligned_cols=146 Identities=18% Similarity=0.124 Sum_probs=103.3
Q ss_pred EEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC--------CCcc---ch
Q psy15208 21 INFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY--------DSGN---GE 89 (1027)
Q Consensus 21 l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~--------~~~~---~~ 89 (1027)
++.|.. .+++|+||++||++ ++.. .|..+++.|++ ++.|++++.+..+.....+ .... ..
T Consensus 5 i~~~~~---~~~~P~vi~lHG~g---~~~~--~~~~~~~~l~~-~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (202)
T d2h1ia1 5 VFQKGK---DTSKPVLLLLHGTG---GNEL--DLLPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFR 75 (202)
T ss_dssp EEECCS---CTTSCEEEEECCTT---CCTT--TTHHHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEECHHHHHHH
T ss_pred cCCCCC---CCCCCEEEEECCCC---CCHH--HHHHHHHHhcc-CCceeeecccccCCCCccccccCCCCCCchHHHHHH
Confidence 455654 35689999999974 3333 35678888875 8999999865443322110 0111 12
Q ss_pred HHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC---CCCCCCCcEEEEEeCCC
Q psy15208 90 TDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---LIPEVPKNTIIIHGELD 164 (1027)
Q Consensus 90 ~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---~l~~i~~PvLiIhG~~D 164 (1027)
..++..+++.+...+. ..+++++|+|+||.+++.++.++|+ .+.++++.++..+.. .......|++++||++|
T Consensus 76 ~~~~~~~i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~G~~D 153 (202)
T d2h1ia1 76 TKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYEN--ALKGAVLHHPMVPRRGMQLANLAGKSVFIAAGTND 153 (202)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTT--SCSEEEEESCCCSCSSCCCCCCTTCEEEEEEESSC
T ss_pred HHHHHHHHHHHHHhccccccceeeecccccchHHHHHHHhccc--cccceeeecCCCCcccccccccccchhhcccccCC
Confidence 3445555555555544 4479999999999999999999998 789999999876533 23446689999999999
Q ss_pred CCCChHHHHhhhC
Q psy15208 165 EIIPLKDVFLWAN 177 (1027)
Q Consensus 165 ~iVP~~~~~~l~~ 177 (1027)
+++|++.+..+.+
T Consensus 154 ~~vp~~~~~~~~~ 166 (202)
T d2h1ia1 154 PICSSAESEELKV 166 (202)
T ss_dssp SSSCHHHHHHHHH
T ss_pred CccCHHHHHHHHH
Confidence 9999998876654
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.38 E-value=4.1e-13 Score=136.41 Aligned_cols=103 Identities=19% Similarity=0.216 Sum_probs=88.5
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecC----CCcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCT----GNYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~at----G~~~vi~ 880 (1027)
+..+.||+++|+|+|.||+.+|+++++|||+|+++|+... .......+++..++++++++||+|+.++ .++++|+
T Consensus 39 ~~~l~~k~vgiiG~G~IG~~va~~~~~fg~~v~~~d~~~~-~~~~~~~~~~~~~l~ell~~sDiv~~~~Plt~~T~~lin 117 (184)
T d1ygya1 39 GTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVS-PARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLID 117 (184)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSC-HHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBC
T ss_pred cccccceeeeeccccchhHHHHHHhhhccceEEeecCCCC-hhHHhhcCceeccHHHHHhhCCEEEEcCCCCchhhhhhh
Confidence 5568999999999999999999999999999999987653 3345567888899999999999999764 3678999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++.|+.||+++++||+|.... +|.++|.
T Consensus 118 ~~~l~~mk~~a~lIN~sRG~i-Vde~aL~ 145 (184)
T d1ygya1 118 KEALAKTKPGVIIVNAARGGL-VDEAALA 145 (184)
T ss_dssp HHHHTTSCTTEEEEECSCTTS-BCHHHHH
T ss_pred HHHHhhhCCCceEEEecchhh-hhhHHHH
Confidence 999999999999999999853 5655555
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=99.38 E-value=4.1e-13 Score=137.76 Aligned_cols=102 Identities=18% Similarity=0.309 Sum_probs=87.4
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.||+|+|+|||.||+.+|+++++|||+|+++|..+. ......++...++++.++++|+|+.++. +.++++
T Consensus 38 g~el~gk~vgIiG~G~IG~~va~~l~~fg~~V~~~d~~~~--~~~~~~~~~~~~l~~~l~~sDii~~~~plt~~T~~li~ 115 (197)
T d1j4aa1 38 GREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRN--PELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMIN 115 (197)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBS
T ss_pred CccccCCeEEEecccccchhHHHhHhhhcccccccCcccc--cccccceeeeccccccccccccccccCCcccccccccc
Confidence 5679999999999999999999999999999999976543 3344567778899999999999998653 678999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
++.|+.||+|+++||+|... -+|.++|.
T Consensus 116 ~~~l~~mk~~a~lIN~sRG~-ivde~aL~ 143 (197)
T d1j4aa1 116 DESIAKMKQDVVIVNVSRGP-LVDTDAVI 143 (197)
T ss_dssp HHHHHHSCTTEEEEECSCGG-GBCHHHHH
T ss_pred HHHHhhhCCccEEEecCchh-hhhhHHHH
Confidence 99999999999999999985 36666654
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.36 E-value=1.4e-12 Score=143.54 Aligned_cols=133 Identities=17% Similarity=0.096 Sum_probs=105.3
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~ 83 (1027)
.+.+.|+.+|| +|.+.+|.|++ .++.|+||+.||++.... .....+...++.|+++||.|+.+|.||+|.|.+.+
T Consensus 5 ~~~v~ipmrDGv~L~~~vy~P~~---~~~~P~il~~~pyg~~~~-~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~ 80 (347)
T d1ju3a2 5 ASNVMVPMRDGVRLAVDLYRPDA---DGPVPVLLVRNPYDKFDV-FAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEF 80 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEEECC---SSCEEEEEEEESSCTTCC-HHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCC
T ss_pred EeCeEEECCCCCEEEEEEEEcCC---CCCEEEEEEEcCCCCccc-cCcCcccHHHHHHHHCCCEEEEEeeCCccccCCcc
Confidence 46789999999 89999999987 367899999999742111 11111223467889999999999999999999987
Q ss_pred CCccchHHHHHHHHHHHHHhC-CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 84 DSGNGETDDMEILLRYIQKKY-PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 84 ~~~~~~~~Dv~avl~~L~~~~-~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
........|...+++|+..+. ...+|.++|+|+||.+++.+|...|+ .+++++...+.
T Consensus 81 ~~~~~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~--~l~aiv~~~~~ 139 (347)
T d1ju3a2 81 VPHVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVG--GLKAIAPSMAS 139 (347)
T ss_dssp CTTTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCT--TEEEBCEESCC
T ss_pred ccccchhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccc--cceeeeecccc
Confidence 666667789999999998753 22479999999999999999998877 67888877653
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.34 E-value=3e-12 Score=137.80 Aligned_cols=146 Identities=14% Similarity=0.107 Sum_probs=105.1
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-CccchHHHH-HHHHHHHHHhCCCCc
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYD-SGNGETDDM-EILLRYIQKKYPYLP 108 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~-~~~~~~~Dv-~avl~~L~~~~~~~p 108 (1027)
..+|.++++||+.. +|+. ..|..+++.|.. +++|+++|+||||.|+.... .....++++ ..+++.+....+..|
T Consensus 58 ~~~~~l~c~~~~~~-~g~~--~~y~~la~~L~~-~~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~~~~~P 133 (283)
T d2h7xa1 58 EGRAVLVGCTGTAA-NGGP--HEFLRLSTSFQE-ERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGDAP 133 (283)
T ss_dssp CCCCEEEEECCCCT-TCST--TTTHHHHHTTTT-TCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCceEEEeCCCCC-CCCH--HHHHHHHHhcCC-CceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhcCCCc
Confidence 45688999998532 2222 248899999976 79999999999998875321 111123333 334555656556779
Q ss_pred EEEEEechhHHHHHHHHHhcCC--cCCccEEEEEccCCCcC---------------------------------------
Q psy15208 109 IILAGFSFGTFVQAKLQKRLDK--EISIKILILISVAVKKW--------------------------------------- 147 (1027)
Q Consensus 109 viLVGhSmGG~vAl~~A~~~p~--~~~V~gLVli~p~~~~~--------------------------------------- 147 (1027)
++|+||||||.+|+.+|.+.++ ...+.+++++++..+..
T Consensus 134 ~vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~ 213 (283)
T d2h7xa1 134 VVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARFLA 213 (283)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHH
T ss_pred eEEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhhhhhhhHHHhhcccccccccHHHHHHHHHHHHHh
Confidence 9999999999999999987643 12689999998754321
Q ss_pred --CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCCC
Q psy15208 148 --LIPEVPKNTIIIHGELDEIIPLKDVFLWANPLD 180 (1027)
Q Consensus 148 --~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~~ 180 (1027)
....+.+|+++++|++|..++++....|.+...
T Consensus 214 ~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~ 248 (283)
T d2h7xa1 214 GPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWD 248 (283)
T ss_dssp SCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCS
T ss_pred hccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCC
Confidence 146788999999999999999998888876544
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=99.33 E-value=1.6e-12 Score=132.37 Aligned_cols=128 Identities=9% Similarity=0.047 Sum_probs=96.9
Q ss_pred ccccccccchhhhhhHHHHHhh-hcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCc-EEcC
Q psy15208 781 VTKSKFDNLYGCRESLIDGIKR-ATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGF-LVVT 858 (1027)
Q Consensus 781 ~~K~~~dn~~g~~~s~~~~i~r-~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~-~v~~ 858 (1027)
..|++.......+++.|+.... .....+.|++|+|+|+|.||+.+|+++++||++|.++|+.+.........++ ...+
T Consensus 14 ~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~ 93 (188)
T d2naca1 14 LVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHAT 93 (188)
T ss_dssp HHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSS
T ss_pred HHhCHHHHHHHHHhCCCCCcccCCcceeccccceeeccccccchhhhhhhhccCceEEEEeeccccccccccccccccCC
Confidence 3344443333444555543222 1245689999999999999999999999999999999987655555545454 4668
Q ss_pred HHHHhccCCEEEecC----CCcccCcHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 859 MEYAKKYGDIFVTCT----GNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 859 ~~e~l~~aDvvi~at----G~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+++.++++|+|+.+. .|.++|+.+.|+.||+|+++||+|... -+|.++|.
T Consensus 94 l~~~l~~sD~v~~~~plt~~T~~li~~~~l~~mk~ga~lIN~aRG~-ivd~~aL~ 147 (188)
T d2naca1 94 REDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGK-LCDRDAVA 147 (188)
T ss_dssp HHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGG-GBCHHHHH
T ss_pred HHHHHHhccchhhcccccccchhhhHHHHHHhCCCCCEEEecCchh-hhhHHHHH
Confidence 999999999998754 367999999999999999999999984 45666565
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=99.33 E-value=9.5e-13 Score=134.43 Aligned_cols=104 Identities=13% Similarity=0.207 Sum_probs=86.6
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH-HhhcCcEEcCHHHHhccCCEEEecC----CCcccC
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ-AAMEGFLVVTMEYAKKYGDIFVTCT----GNYHVI 879 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-A~~~G~~v~~~~e~l~~aDvvi~at----G~~~vi 879 (1027)
+..+.||+++|+|+|.||+.+|+++++||++|+++|+.+..... ....+....+++++++++|+|+.++ .++++|
T Consensus 42 ~~~l~g~tvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~ll~~sD~v~l~~plt~~T~~li 121 (191)
T d1gdha1 42 GEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFF 121 (191)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCB
T ss_pred cceecccceEEeecccchHHHHHHHHhhccccccccccccccchhhcccccccCCHHHHHhhCCeEEecCCCCchHhhee
Confidence 55789999999999999999999999999999999886644333 3334445678999999999998765 467999
Q ss_pred cHHHHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 880 THDHMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 880 ~~~~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
+++.|+.||+|+++||+|... -+|.++|.
T Consensus 122 ~~~~l~~mk~~a~lIN~sRG~-ivde~aL~ 150 (191)
T d1gdha1 122 NKATIKSLPQGAIVVNTARGD-LVDNELVV 150 (191)
T ss_dssp SHHHHTTSCTTEEEEECSCGG-GBCHHHHH
T ss_pred cHHHhhCcCCccEEEecCCcc-chhhHHHH
Confidence 999999999999999999984 46666554
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.31 E-value=2.2e-12 Score=131.69 Aligned_cols=100 Identities=16% Similarity=0.144 Sum_probs=74.0
Q ss_pred cEEEEECCCCCCCCCCChHHHHHHHHHHHhC--CcEEEEEcCCCCCCCCCCCC-CccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 34 GVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL--GYISIRMNFRGVGASSGTYD-SGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~~~~~~~la~~La~~--Gy~Vla~DlrGhG~S~g~~~-~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
++|||+||++. +.. .|..+++.|.+. ||+|+++|+||||.|..... +.+..+.|+..+++ ..+ .+++
T Consensus 3 ~PvvllHG~~~---~~~--~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~~~~~~~~~~~l~~~l~----~l~-~~~~ 72 (268)
T d1pjaa_ 3 KPVIVVHGLFD---SSY--SFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAVVPIMA----KAP-QGVH 72 (268)
T ss_dssp CCEEEECCTTC---CGG--GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHHHHHHHHHHHHHHHHH----HCT-TCEE
T ss_pred CCEEEECCCCC---CHH--HHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCccccCHHHHHHHHHHHHh----ccC-CeEE
Confidence 34688999843 322 478899999875 79999999999999975421 12223444333333 334 5899
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
|+||||||.+|+.+|.++|+. +++++|+++++.
T Consensus 73 lvGhS~GG~ia~~~a~~~p~~-~v~~lvl~~~~~ 105 (268)
T d1pjaa_ 73 LICYSQGGLVCRALLSVMDDH-NVDSFISLSSPQ 105 (268)
T ss_dssp EEEETHHHHHHHHHHHHCTTC-CEEEEEEESCCT
T ss_pred EEccccHHHHHHHHHHHCCcc-ccceEEEECCCC
Confidence 999999999999999999973 499999998754
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.30 E-value=9e-12 Score=130.27 Aligned_cols=143 Identities=12% Similarity=0.093 Sum_probs=103.9
Q ss_pred CCccEEEEECCCCCCCCCCChHHHH----HHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCC
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQ----TLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPY 106 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~----~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~ 106 (1027)
.++|+|||+||+++..+......+. .+++.+++.||.|+.+|+|..+.. .......|+...++|+.+..+.
T Consensus 29 ~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~-----~~~~~~~d~~~~~~~l~~~~~~ 103 (263)
T d1vkha_ 29 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEI-----TNPRNLYDAVSNITRLVKEKGL 103 (263)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTS-----CTTHHHHHHHHHHHHHHHHHTC
T ss_pred CCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcch-----hhhHHHHhhhhhhhcccccccc
Confidence 5789999999977654443332333 355666778999999999965433 2335789999999999988887
Q ss_pred CcEEEEEechhHHHHHHHHHhcCCc---------------CCccEEEEEccCCCc------------------------C
Q psy15208 107 LPIILAGFSFGTFVQAKLQKRLDKE---------------ISIKILILISVAVKK------------------------W 147 (1027)
Q Consensus 107 ~pviLVGhSmGG~vAl~~A~~~p~~---------------~~V~gLVli~p~~~~------------------------~ 147 (1027)
.+++|+|||+||.+++.++...++. ..+...+..++.... +
T Consensus 104 ~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (263)
T d1vkha_ 104 TNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTRLAFPDGIQMY 183 (263)
T ss_dssp CCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGHHHHHHHCTTCGGGC
T ss_pred cceeeeccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccchhhhhhccccchhhhcccccccccc
Confidence 8999999999999999998866542 124555555542110 0
Q ss_pred C-------------CCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 148 L-------------IPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 148 ~-------------l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
. +..+..|++++||++|+++|++++..+.+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~s~~l~~~ 227 (263)
T d1vkha_ 184 EEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISC 227 (263)
T ss_dssp CCCHHHHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHH
T ss_pred cccccccCccccccccccCCCeeeeecCCCcccCHHHHHHHHHH
Confidence 0 223568999999999999999998877654
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.29 E-value=1.2e-11 Score=125.10 Aligned_cols=141 Identities=15% Similarity=0.107 Sum_probs=100.2
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC--C--C----Cccc---hHHHHHHHHHH
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT--Y--D----SGNG---ETDDMEILLRY 99 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~--~--~----~~~~---~~~Dv~avl~~ 99 (1027)
+.+|+||++||++ ++. ..|..+++.|++ ++.++.++.+..+.+... . . .... ...++..+++.
T Consensus 15 ~~~P~vi~lHG~G---~~~--~~~~~~~~~l~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 88 (203)
T d2r8ba1 15 AGAPLFVLLHGTG---GDE--NQFFDFGARLLP-QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKA 88 (203)
T ss_dssp TTSCEEEEECCTT---CCH--HHHHHHHHHHST-TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC---CCH--HHHHHHHHHhcc-CCeEEEeccccccccccccccccCccccchhHHHHHHHHHHHHHHH
Confidence 4689999999974 332 357788888875 788999987655443211 1 0 1111 12333333343
Q ss_pred HHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC---CCCCCCCcEEEEEeCCCCCCChHHHHhhh
Q psy15208 100 IQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW---LIPEVPKNTIIIHGELDEIIPLKDVFLWA 176 (1027)
Q Consensus 100 L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~---~l~~i~~PvLiIhG~~D~iVP~~~~~~l~ 176 (1027)
.....+..+++++||||||.+++.++..+|+ .+.++++.++..+.. .......|++++||++|+++|++.+.++.
T Consensus 89 ~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~hG~~D~~vp~~~~~~~~ 166 (203)
T d2r8ba1 89 NREHYQAGPVIGLGFSNGANILANVLIEQPE--LFDAAVLMHPLIPFEPKISPAKPTRRVLITAGERDPICPVQLTKALE 166 (203)
T ss_dssp HHHHHTCCSEEEEEETHHHHHHHHHHHHSTT--TCSEEEEESCCCCSCCCCCCCCTTCEEEEEEETTCTTSCHHHHHHHH
T ss_pred hhhcCCCceEEEEEecCHHHHHHHHHHhhhh--cccceeeeccccccccccccccccchhhccccCCCCcccHHHHHHHH
Confidence 3344466689999999999999999999998 789999999865433 23345689999999999999999988776
Q ss_pred CCC
Q psy15208 177 NPL 179 (1027)
Q Consensus 177 ~~~ 179 (1027)
+.+
T Consensus 167 ~~L 169 (203)
T d2r8ba1 167 ESL 169 (203)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.27 E-value=2.4e-11 Score=136.36 Aligned_cols=118 Identities=13% Similarity=-0.008 Sum_probs=84.4
Q ss_pred Cc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCC------cEEEEEcCCCCCCCCCCCCCc
Q psy15208 14 VG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLG------YISIRMNFRGVGASSGTYDSG 86 (1027)
Q Consensus 14 dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~G------y~Vla~DlrGhG~S~g~~~~~ 86 (1027)
+| +||.....+.+ +..++|||+|||++ ++ ..|+.++..|++.| |+|+++|+||||.|+......
T Consensus 90 ~G~~iHf~h~~~~~----~~~~pLlLlHG~P~---s~--~~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~~ 160 (394)
T d1qo7a_ 90 EGLTIHFAALFSER----EDAVPIALLHGWPG---SF--VEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDK 160 (394)
T ss_dssp TTEEEEEEEECCSC----TTCEEEEEECCSSC---CG--GGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSSS
T ss_pred CCEEEEEEEEeccC----CCCCEEEEeccccc---cH--HHHHHHHHhhccccCCcccceeeecccccccCCCCCCCCCC
Confidence 45 77776554443 34677899999964 32 24889999999987 999999999999998643221
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
.....+....+..+.......+.+++|||+||.++..++..+|+ .+.++++...
T Consensus 161 ~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~--~~~~~~l~~~ 214 (394)
T d1qo7a_ 161 DFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFD--ACKAVHLNLC 214 (394)
T ss_dssp CCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCT--TEEEEEESCC
T ss_pred ccCHHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHhhc--cccceeEeee
Confidence 11233333333344444455578999999999999999999998 6777777654
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.27 E-value=3.1e-11 Score=123.49 Aligned_cols=131 Identities=13% Similarity=0.028 Sum_probs=91.2
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCC--CC--CCCC----CCCccch---HHHHHHHHHH
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGV--GA--SSGT----YDSGNGE---TDDMEILLRY 99 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGh--G~--S~g~----~~~~~~~---~~Dv~avl~~ 99 (1027)
+.+|+||++||++. +.. .|..+++.|.. ++.+++++.+.. |. .... ....... +.++..+++.
T Consensus 21 ~~~p~vv~lHG~g~---~~~--~~~~l~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 94 (209)
T d3b5ea1 21 ESRECLFLLHGSGV---DET--TLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNE 94 (209)
T ss_dssp SCCCEEEEECCTTB---CTT--TTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCC---CHH--HHHHHHHHhcc-CcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHHHHHHH
Confidence 56899999999853 332 36678888876 789999876421 11 0000 0111222 3444445555
Q ss_pred HHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC---CCCCCCcEEEEEeCCCCCCCh
Q psy15208 100 IQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL---IPEVPKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 100 L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~---l~~i~~PvLiIhG~~D~iVP~ 169 (1027)
+.+++ +..+++++||||||.+++.++.++|+ .++++++++|...... ......|++++||++|+++|.
T Consensus 95 ~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~--~~~~~v~~~g~~~~~~~~~~~~~~~p~~~~~G~~D~~~~~ 167 (209)
T d3b5ea1 95 AAKRHGLNLDHATFLGYSNGANLVSSLMLLHPG--IVRLAALLRPMPVLDHVPATDLAGIRTLIIAGAADETYGP 167 (209)
T ss_dssp HHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTT--SCSEEEEESCCCCCSSCCCCCCTTCEEEEEEETTCTTTGG
T ss_pred HHHHhCcccCCEEEEeeCChHHHHHHHHHhCCC--cceEEEEeCCccccccccccccccchheeeeccCCCccCH
Confidence 55443 34579999999999999999999998 7999999998754322 334578999999999999985
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=99.26 E-value=2.4e-12 Score=130.26 Aligned_cols=97 Identities=20% Similarity=0.303 Sum_probs=81.8
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecC----CCcccCcHH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCT----GNYHVITHD 882 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~at----G~~~vi~~~ 882 (1027)
.+.||+|+|+|+|.||+.+|+.+++||++|+++|+++... ......+++++++++|+|+.++ .++++++.+
T Consensus 39 ~l~gk~vgIiG~G~IG~~va~~l~~~g~~v~~~d~~~~~~-----~~~~~~~l~ell~~sDiv~~~~pl~~~t~~li~~~ 113 (181)
T d1qp8a1 39 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPKEG-----PWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQ 113 (181)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCCCS-----SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHH
T ss_pred cccCceEEEeccccccccceeeeecccccccccccccccc-----ceeeeechhhhhhccchhhcccccccccccccccc
Confidence 4899999999999999999999999999999998876421 1112457899999999999865 467999999
Q ss_pred HHhcCCCCeEEEEecCCCcccchhhhh
Q psy15208 883 HMRDMKDQAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~d~eid~~~l~ 909 (1027)
.|+.||+++++||+|... -+|.++|.
T Consensus 114 ~l~~mk~~ailIN~~RG~-ivd~~aL~ 139 (181)
T d1qp8a1 114 HLALMAEDAVFVNVGRAE-VLDRDGVL 139 (181)
T ss_dssp HHTTSCTTCEEEECSCGG-GBCHHHHH
T ss_pred eeeeccccceEEeccccc-cccchhhh
Confidence 999999999999999875 36666654
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.25 E-value=1.4e-11 Score=125.28 Aligned_cols=126 Identities=20% Similarity=0.233 Sum_probs=91.2
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
.+++|||+||++ |+. ..|..+++.|. +|.|+++|++|+|. .+++ +++.+.+..+..|++|
T Consensus 16 ~~~~l~~lhg~~---g~~--~~~~~la~~L~--~~~v~~~~~~g~~~----------~a~~---~~~~i~~~~~~~~~~l 75 (230)
T d1jmkc_ 16 QEQIIFAFPPVL---GYG--LMYQNLSSRLP--SYKLCAFDFIEEED----------RLDR---YADLIQKLQPEGPLTL 75 (230)
T ss_dssp CSEEEEEECCTT---CCG--GGGHHHHHHCT--TEEEEEECCCCSTT----------HHHH---HHHHHHHHCCSSCEEE
T ss_pred CCCeEEEEcCCC---CCH--HHHHHHHHHCC--CCEEeccCcCCHHH----------HHHH---HHHHHHHhCCCCcEEE
Confidence 467899999974 333 35889999994 79999999999873 3444 3444555556678999
Q ss_pred EEechhHHHHHHHHHhcCCc-CCccEEEEEccCCCcC-------------------------------------------
Q psy15208 112 AGFSFGTFVQAKLQKRLDKE-ISIKILILISVAVKKW------------------------------------------- 147 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~-~~V~gLVli~p~~~~~------------------------------------------- 147 (1027)
+||||||.+|+.+|.++|+. ..+..++...+..+..
T Consensus 76 vGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (230)
T d1jmkc_ 76 FGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFY 155 (230)
T ss_dssp EEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSGGGSHHHHHHHHHHHHHHH
T ss_pred EeeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhhhhhhhhhhhhhhhccccccccccHHHHHHHHHHHHHHH
Confidence 99999999999999988762 2355666665432100
Q ss_pred -------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 148 -------LIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 148 -------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
....+++|+++++|++|..++.. ...|.+.
T Consensus 156 ~~~~~~~~~~~i~~p~l~i~g~~D~~~~~~-~~~w~~~ 192 (230)
T d1jmkc_ 156 SYYVNLISTGQVKADIDLLTSGADFDIPEW-LASWEEA 192 (230)
T ss_dssp HHHHHCCCCSCBSSEEEEEECSSCCCCCTT-EECSGGG
T ss_pred HhhhcccccccccCcceeeeecCCcccchh-HHHHHHh
Confidence 15678899999999999998864 3344443
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=2.9e-11 Score=125.69 Aligned_cols=140 Identities=17% Similarity=0.054 Sum_probs=93.0
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCC---------CCCCC----CCcc---c----hH
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGA---------SSGTY----DSGN---G----ET 90 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~---------S~g~~----~~~~---~----~~ 90 (1027)
++.++|||+||+++ +. ..|..+...|...++.+++++.|.+.. +.... .... . ..
T Consensus 19 ~~~~~VI~lHG~G~---~~--~~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~ 93 (229)
T d1fj2a_ 19 KATAAVIFLHGLGD---TG--HGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAA 93 (229)
T ss_dssp CCSEEEEEECCSSS---CH--HHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHH
T ss_pred CCCCEEEEEcCCCC---CH--HHHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHH
Confidence 45678999999743 32 236667777777899999988653311 11000 0111 1 12
Q ss_pred HHHHHHHHHHHHh-CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC--------CCCCCCCcEEEEEe
Q psy15208 91 DDMEILLRYIQKK-YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW--------LIPEVPKNTIIIHG 161 (1027)
Q Consensus 91 ~Dv~avl~~L~~~-~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~--------~l~~i~~PvLiIhG 161 (1027)
+.+..+++..... .+..+++++|+||||.+|+.++.++|+ ++++++.+++..+.. .....+.|++++||
T Consensus 94 ~~l~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~--~~~gvi~~sg~lp~~~~~~~~~~~~~~~~~Pvli~hG 171 (229)
T d1fj2a_ 94 ENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQ--KLAGVTALSCWLPLRASFPQGPIGGANRDISILQCHG 171 (229)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSS--CCSEEEEESCCCTTGGGSCSSCCCSTTTTCCEEEEEE
T ss_pred HHHHHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhcc--ccCccccccccccccccccccccccccccCceeEEEc
Confidence 2233333333322 345579999999999999999999998 799999998754311 12233589999999
Q ss_pred CCCCCCChHHHHhhhC
Q psy15208 162 ELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 162 ~~D~iVP~~~~~~l~~ 177 (1027)
++|+++|++.++...+
T Consensus 172 ~~D~~vp~~~~~~~~~ 187 (229)
T d1fj2a_ 172 DCDPLVPLMFGSLTVE 187 (229)
T ss_dssp TTCSSSCHHHHHHHHH
T ss_pred CCCCeeCHHHHHHHHH
Confidence 9999999998765444
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.23 E-value=4.5e-12 Score=129.02 Aligned_cols=102 Identities=17% Similarity=0.215 Sum_probs=84.4
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC----CcccCc
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG----NYHVIT 880 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG----~~~vi~ 880 (1027)
+..+.|++|+|+|+|.||+.+|+++++||++|+++|+..... ......+.+++++++.+|+|+.+.+ +.++|+
T Consensus 39 ~~~l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~---~~~~~~~~~l~ell~~sDii~i~~plt~~T~~li~ 115 (188)
T d1sc6a1 39 SFEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP---LGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMG 115 (188)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC---CTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBC
T ss_pred cccccceEEEEeecccchhhhhhhcccccceEeeccccccch---hhhhhhhhhHHHHHhhccceeecccCCcchhhhcc
Confidence 456899999999999999999999999999999998765322 1233456789999999999997643 569999
Q ss_pred HHHHhcCCCCeEEEEecCCCcccchhhhhc
Q psy15208 881 HDHMRDMKDQAIVCNIGHFDNEIEVEKLKK 910 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~d~eid~~~l~~ 910 (1027)
++.|+.||++++|||++... -+|.++|..
T Consensus 116 ~~~l~~mk~~a~lIN~aRG~-lvde~aL~~ 144 (188)
T d1sc6a1 116 AKEISLMKPGSLLINASRGT-VVDIPALAD 144 (188)
T ss_dssp HHHHHHSCTTEEEEECSCSS-SBCHHHHHH
T ss_pred HHHHhhCCCCCEEEEcCcHH-hhhhHHHHH
Confidence 99999999999999999984 356665543
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.21 E-value=8.2e-11 Score=131.94 Aligned_cols=134 Identities=20% Similarity=0.212 Sum_probs=104.6
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCC-----CCCC-hHHHHHHHHHHHhCCcEEEEEcCCCCC
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFG-----GTMD-NKVVQTLVRVMLSLGYISIRMNFRGVG 77 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~g-----Gs~~-~~~~~~la~~La~~Gy~Vla~DlrGhG 77 (1027)
.+++.|+..|| +|.+.+|.|++ .++.|+||+.|+++..+ .... ...+...++.|+++||.|+.+|.||+|
T Consensus 24 ~~~v~i~~rDG~~L~~~v~~P~~---~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g 100 (381)
T d1mpxa2 24 KREVMIPMRDGVKLHTVIVLPKG---AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKY 100 (381)
T ss_dssp EEEEEEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTST
T ss_pred EEEEEEECCCCCEEEEEEEEeCC---CCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccC
Confidence 46789999999 89999999987 46789999999863100 0010 112234678899999999999999999
Q ss_pred CCCCCCCC-----------ccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 78 ASSGTYDS-----------GNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 78 ~S~g~~~~-----------~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
.|.+.+.. ....+.|..++++|+..+.+ ..+|.++|+|+||.+++.+|...|+ .++++|..++.
T Consensus 101 ~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~--~l~a~v~~~~~ 177 (381)
T d1mpxa2 101 GSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHP--ALKVAVPESPM 177 (381)
T ss_dssp TCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCT--TEEEEEEESCC
T ss_pred CCCCceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhcccc--ccceeeeeccc
Confidence 99975421 12478999999999987743 3479999999999999999998887 68999988764
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.19 E-value=3.7e-11 Score=131.62 Aligned_cols=137 Identities=12% Similarity=-0.021 Sum_probs=104.3
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILA 112 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLV 112 (1027)
++.|||+||++. +....+|..+++.|++.||.|+.+|+||+|.++. +...+++...++++....+..++.|+
T Consensus 31 ~~PVvlvHG~~~---~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~-----~~sae~la~~i~~v~~~~g~~kV~lV 102 (317)
T d1tcaa_ 31 SKPILLVPGTGT---TGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDT-----QVNTEYMVNAITALYAGSGNNKLPVL 102 (317)
T ss_dssp SSEEEEECCTTC---CHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCH-----HHHHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred CCcEEEECCCCC---CCcchhHHHHHHHHHhCCCeEEEecCCCCCCCch-----HhHHHHHHHHHHHHHHhccCCceEEE
Confidence 345789999743 2222345678999999999999999999987642 34577888888888888787899999
Q ss_pred EechhHHHHHHHHHhcCCc-CCccEEEEEccCCCcC------------------------C--------CCCCCCcEEEE
Q psy15208 113 GFSFGTFVQAKLQKRLDKE-ISIKILILISVAVKKW------------------------L--------IPEVPKNTIII 159 (1027)
Q Consensus 113 GhSmGG~vAl~~A~~~p~~-~~V~gLVli~p~~~~~------------------------~--------l~~i~~PvLiI 159 (1027)
||||||.++..++.++|+. .+|+.+|.++++.... + ...-.+|.+.|
T Consensus 103 GhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~Gt~~a~~~~~~~~~~pa~~q~~~~s~fl~~L~~~~~~~~~V~~t~I 182 (317)
T d1tcaa_ 103 TWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDALAVSAPSVWQQTTGSALTTALRNAGGLTQIVPTTNL 182 (317)
T ss_dssp EETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHHHTTCBCHHHHHTBTTCHHHHHHHHTTTTBCSSCEEEE
T ss_pred EeCchHHHHHHHHHHCCCcchheeEEEEeCCCCCCcccccchhhhhccCchhhhhcCCcHHHHHHHhCCCCCCCCCEEEE
Confidence 9999999999999998862 3699999999864311 0 01124789999
Q ss_pred EeCCCCCCChHHHHhhhC
Q psy15208 160 HGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 160 hG~~D~iVP~~~~~~l~~ 177 (1027)
++..|.+|.|..+..+.+
T Consensus 183 ~s~~D~iV~P~~~~~~~~ 200 (317)
T d1tcaa_ 183 YSATDEIVQPQVSNSPLD 200 (317)
T ss_dssp ECTTCSSSCCCCSSSTTS
T ss_pred ecCCCcccCccccchhcc
Confidence 999999998866554433
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.13 E-value=1.5e-11 Score=134.77 Aligned_cols=107 Identities=11% Similarity=0.065 Sum_probs=79.4
Q ss_pred CccEEEEECCCCCCCCCCC-hHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEE
Q psy15208 32 LKGVVLIAHPHPLFGGTMD-NKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPII 110 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~-~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pvi 110 (1027)
++.+|||+||+..+...+. ...|..+.+.|.++||+|+++|+||+|.|..... ..+++...++.+....+.++++
T Consensus 7 ~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~~----~~~~l~~~i~~~~~~~~~~~v~ 82 (319)
T d1cvla_ 7 TRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNG----RGEQLLAYVKQVLAATGATKVN 82 (319)
T ss_dssp CSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTTS----HHHHHHHHHHHHHHHHCCSCEE
T ss_pred CCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc----cHHHHHHHHHHHHHHhCCCCEE
Confidence 4444688999743221111 1146778999999999999999999998876433 3444444444444444667899
Q ss_pred EEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 111 LAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 111 LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
++||||||.++..++.++|+ +++++|+++++.
T Consensus 83 lvGhS~GG~~~~~~~~~~p~--~v~~vv~i~~p~ 114 (319)
T d1cvla_ 83 LIGHSQGGLTSRYVAAVAPQ--LVASVTTIGTPH 114 (319)
T ss_dssp EEEETTHHHHHHHHHHHCGG--GEEEEEEESCCT
T ss_pred EEeccccHHHHHHHHHHCcc--ccceEEEECCCC
Confidence 99999999999999999999 799999999764
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.10 E-value=1.7e-09 Score=110.89 Aligned_cols=141 Identities=13% Similarity=0.003 Sum_probs=85.5
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHhC--CcEEEEEcCCCC------CC--CCCC-----CCCccchHHHHH-
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSL--GYISIRMNFRGV------GA--SSGT-----YDSGNGETDDME- 94 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~--Gy~Vla~DlrGh------G~--S~g~-----~~~~~~~~~Dv~- 94 (1027)
+++++|||+||++++ .. .+..+++.|.+. ++.+++++-|.. +. ..+. ........+++.
T Consensus 12 ~~~~~Vi~lHG~G~~---~~--~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 86 (218)
T d1auoa_ 12 PADACVIWLHGLGAD---RY--DFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEV 86 (218)
T ss_dssp CCSEEEEEECCTTCC---TT--TTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHH
T ss_pred CCCeEEEEEcCCCCC---hh--hHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHH
Confidence 457899999998543 22 255677777654 456666654311 11 1110 001111222222
Q ss_pred ------HHHHHHHH-hCCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCCC------CCCCCcEEEEEe
Q psy15208 95 ------ILLRYIQK-KYPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWLI------PEVPKNTIIIHG 161 (1027)
Q Consensus 95 ------avl~~L~~-~~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~l------~~i~~PvLiIhG 161 (1027)
.+++.... ..+..+++++|+||||.+++.++..+++. .+.+++.+++..+.... .....|++++||
T Consensus 87 ~~~~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~-~~~~~v~~~g~~~~~~~~~~~~~~~~~~pvl~~hG 165 (218)
T d1auoa_ 87 SAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQG-PLGGVIALSTYAPTFGDELELSASQQRIPALCLHG 165 (218)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCS-CCCEEEEESCCCTTCCTTCCCCHHHHTCCEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccc-cceeeeeccccCcccccccccchhccCCCEEEEec
Confidence 22222211 12345799999999999999987654432 68999999876543311 122579999999
Q ss_pred CCCCCCChHHHHhhhC
Q psy15208 162 ELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 162 ~~D~iVP~~~~~~l~~ 177 (1027)
++|.++|++.+.+..+
T Consensus 166 ~~D~vvp~~~~~~~~~ 181 (218)
T d1auoa_ 166 QYDDVVQNAMGRSAFE 181 (218)
T ss_dssp TTCSSSCHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHH
Confidence 9999999998775554
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.09 E-value=1.1e-09 Score=121.48 Aligned_cols=137 Identities=14% Similarity=0.094 Sum_probs=103.9
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~ 82 (1027)
..++.++.+.+| .+.+.+|.|++. .++.|+||++||+++..|+.+...++.+++.|+++|+.|+.+|||.-+.....
T Consensus 78 ~~~~~~i~~~dg~~i~~~iy~P~~~--~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~pe 155 (358)
T d1jkma_ 78 ETSTETILGVDGNEITLHVFRPAGV--EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGH 155 (358)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTC--CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEE
T ss_pred cEEEEEEeCCCCCEEEEEEEecCCC--CCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeeccccccccc
Confidence 345677888888 899999999863 35689999999988877776655677889999999999999999975433211
Q ss_pred CCCccchHHHHHHHHHHHHHh---CCCCcEEEEEechhHHHHHHHHHhcC---CcCCccEEEEEccC
Q psy15208 83 YDSGNGETDDMEILLRYIQKK---YPYLPIILAGFSFGTFVQAKLQKRLD---KEISIKILILISVA 143 (1027)
Q Consensus 83 ~~~~~~~~~Dv~avl~~L~~~---~~~~pviLVGhSmGG~vAl~~A~~~p---~~~~V~gLVli~p~ 143 (1027)
..+...++|+.+.++|+.+. ++..+++|+|+|.||.+++.++.... ....+.++++..|.
T Consensus 156 -~~~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~ 221 (358)
T d1jkma_ 156 -HPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPY 221 (358)
T ss_dssp -CCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCC
T ss_pred -CCCchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccce
Confidence 13446799999999999753 34457999999999999987765421 11247888888774
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.06 E-value=2.3e-09 Score=111.62 Aligned_cols=172 Identities=14% Similarity=0.051 Sum_probs=112.5
Q ss_pred ceEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC-
Q psy15208 4 NTKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG- 81 (1027)
Q Consensus 4 ~~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g- 81 (1027)
+++++++++.|| +|+++++.|++....++.|+||++||+++....... .......++..++.+...+.++......
T Consensus 6 ~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (280)
T d1qfma2 6 QTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNY--SVSRLIFVRHMGGVLAVANIRGGGEYGET 83 (280)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCC--CHHHHHHHHHHCCEEEEECCTTSSTTHHH
T ss_pred EEEEEEEECCCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCc--chhhhhhhcccceeeeccccccccccchh
Confidence 457799999999 799999999874445678999999997543333322 2233444555577777777765544221
Q ss_pred ----CC-CCccchHHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-------
Q psy15208 82 ----TY-DSGNGETDDMEILLRYIQKKY--PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW------- 147 (1027)
Q Consensus 82 ----~~-~~~~~~~~Dv~avl~~L~~~~--~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~------- 147 (1027)
.. ........+......+..... .....+.+|+|.||..+...+...++ ..++++...+.....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 161 (280)
T d1qfma2 84 WHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPD--LFGCVIAQVGVMDMLKFHKYTI 161 (280)
T ss_dssp HHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGG--GCSEEEEESCCCCTTTGGGSTT
T ss_pred hhhcccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccc--hhhheeeeccccchhhhccccc
Confidence 10 111223444444444444433 23358999999999999999999887 567777776542210
Q ss_pred ---------------------------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCCC
Q psy15208 148 ---------------------------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANPL 179 (1027)
Q Consensus 148 ---------------------------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~~ 179 (1027)
.......|+|++||++|+.||+.++.++.+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~pP~LiihG~~D~~Vp~~~s~~l~~aL 226 (280)
T d1qfma2 162 GHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATL 226 (280)
T ss_dssp GGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHH
T ss_pred cccceecccCCCcccccccccccccccccchhhhcccCCCceEEeecccCCCCCHHHHHHHHHHH
Confidence 01122348999999999999999988776543
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.06 E-value=1.6e-09 Score=122.23 Aligned_cols=121 Identities=16% Similarity=0.220 Sum_probs=97.3
Q ss_pred HHHHHHHhCCcEEEEEcCCCCCCCCCCCCCc-cchHHHHHHHHHHHHHhCC----------------CCcEEEEEechhH
Q psy15208 56 TLVRVMLSLGYISIRMNFRGVGASSGTYDSG-NGETDDMEILLRYIQKKYP----------------YLPIILAGFSFGT 118 (1027)
Q Consensus 56 ~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~-~~~~~Dv~avl~~L~~~~~----------------~~pviLVGhSmGG 118 (1027)
.+.++|+++||.|+.+|.||+|.|.|.+... ....+|..++++|+..+.. ..+|.++|+|+||
T Consensus 127 ~~~~~~~~~GYavv~~D~RG~g~S~G~~~~~~~~e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G 206 (405)
T d1lnsa3 127 SLNDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLG 206 (405)
T ss_dssp HHHHHHHTTTCEEEEECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHH
T ss_pred cchHHHHhCCCEEEEECCCCCCCCCCccccCChhhhhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHHH
Confidence 4567899999999999999999999976433 3568899999999975321 2269999999999
Q ss_pred HHHHHHHHhcCCcCCccEEEEEccCCCc----------------------------------------------------
Q psy15208 119 FVQAKLQKRLDKEISIKILILISVAVKK---------------------------------------------------- 146 (1027)
Q Consensus 119 ~vAl~~A~~~p~~~~V~gLVli~p~~~~---------------------------------------------------- 146 (1027)
.+++.+|...|+ .++++|..++....
T Consensus 207 ~~q~~aA~~~pp--~LkAivp~~~~~d~y~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (405)
T d1lnsa3 207 TMAYGAATTGVE--GLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEM 284 (405)
T ss_dssp HHHHHHHTTTCT--TEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCc--cceEEEecCccccHHHHhhcCCccccccchhhhhhhhhhccccccccccchhhhchhhhhhccchh
Confidence 999999999887 68999988764320
Q ss_pred --------------C-------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 147 --------------W-------LIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 147 --------------~-------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
| .+.++++|+|+++|..|..+++..+..+++.
T Consensus 285 ~~~~~~~~~~~d~~w~~~s~~~~~~~I~vP~L~i~Gw~D~~v~~~~~~~~y~a 337 (405)
T d1lnsa3 285 TAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKA 337 (405)
T ss_dssp HHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHH
T ss_pred hhhhhhccccchhhhhhcChhhhhhcCCCCEEEEEeccCCCCCHHHHHHHHHH
Confidence 0 1456889999999999999998887766553
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.05 E-value=4.3e-10 Score=118.86 Aligned_cols=131 Identities=12% Similarity=-0.041 Sum_probs=95.1
Q ss_pred CccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEE
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviL 111 (1027)
.+|.++++||+.. +|+. ..|..+++.|.. .+.|+++|+||||.++..+.+.+.++++ +++.+....+..|++|
T Consensus 41 ~~~~l~c~~~~~~-gg~~--~~y~~La~~L~~-~~~V~al~~pG~~~~e~~~~s~~~~a~~---~~~~i~~~~~~~P~~L 113 (255)
T d1mo2a_ 41 GEVTVICCAGTAA-ISGP--HEFTRLAGALRG-IAPVRAVPQPGYEEGEPLPSSMAAVAAV---QADAVIRTQGDKPFVV 113 (255)
T ss_dssp CSSEEEEECCCSS-SCSG--GGGHHHHHHHTT-TCCEEEECCTTSSTTCCEESSHHHHHHH---HHHHHHHTTSSSCEEE
T ss_pred CCCeEEEECCCCC-CCCH--HHHHHHHHhcCC-CceEEEEeCCCcCCCCCCCCCHHHHHHH---HHHHHHHhCCCCCEEE
Confidence 5788999998421 2222 358899999976 5899999999999887544443333333 4455555567779999
Q ss_pred EEechhHHHHHHHHHhcCCc-CCccEEEEEccCCCcC-----------------------------------------CC
Q psy15208 112 AGFSFGTFVQAKLQKRLDKE-ISIKILILISVAVKKW-----------------------------------------LI 149 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~-~~V~gLVli~p~~~~~-----------------------------------------~l 149 (1027)
+||||||.+|+.+|.+.++. ..+.+++++++..+.. ..
T Consensus 114 ~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~ 193 (255)
T d1mo2a_ 114 AGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTALGAYDRLTGQWRP 193 (255)
T ss_dssp EECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHHHHHHHHHHHHTTCC----CCCCHHHHHHHHHHHHHHHHCCC
T ss_pred EEeCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCCCccchhhHHHHHHHHhhccccccCCHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999876531 2589999998754311 14
Q ss_pred CCCCCcEEEEEeCCCCCCCh
Q psy15208 150 PEVPKNTIIIHGELDEIIPL 169 (1027)
Q Consensus 150 ~~i~~PvLiIhG~~D~iVP~ 169 (1027)
..+.+|++++.+.+|.....
T Consensus 194 ~~~~~p~l~v~a~~~~~~~~ 213 (255)
T d1mo2a_ 194 RETGLPTLLVSAGEPMGPWP 213 (255)
T ss_dssp CCCCCCEEEEECCSSSSCCT
T ss_pred ccccceEEEeecCCCCCcch
Confidence 56789999999988855443
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.04 E-value=7e-11 Score=111.78 Aligned_cols=82 Identities=11% Similarity=0.048 Sum_probs=61.8
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILA 112 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLV 112 (1027)
.|+|||+||.. ..|.+.|+ ++|+|+++|+||||.|+....+.+.+++|+.++++.+. ..+++++
T Consensus 21 G~pvlllHG~~-----------~~w~~~L~-~~yrvi~~DlpG~G~S~~p~~s~~~~a~~i~~ll~~L~----i~~~~vi 84 (122)
T d2dsta1 21 GPPVLLVAEEA-----------SRWPEALP-EGYAFYLLDLPGYGRTEGPRMAPEELAHFVAGFAVMMN----LGAPWVL 84 (122)
T ss_dssp SSEEEEESSSG-----------GGCCSCCC-TTSEEEEECCTTSTTCCCCCCCHHHHHHHHHHHHHHTT----CCSCEEE
T ss_pred CCcEEEEeccc-----------cccccccc-CCeEEEEEeccccCCCCCcccccchhHHHHHHHHHHhC----CCCcEEE
Confidence 36789999941 12334454 59999999999999998654555667777777666554 4478999
Q ss_pred EechhHHHHHHHHHhcCC
Q psy15208 113 GFSFGTFVQAKLQKRLDK 130 (1027)
Q Consensus 113 GhSmGG~vAl~~A~~~p~ 130 (1027)
||||||.+++.+++..+.
T Consensus 85 G~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 85 LRGLGLALGPHLEALGLR 102 (122)
T ss_dssp ECGGGGGGHHHHHHTTCC
T ss_pred EeCccHHHHHHHHhhccc
Confidence 999999999999987544
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.03 E-value=8.8e-11 Score=126.85 Aligned_cols=103 Identities=12% Similarity=-0.010 Sum_probs=77.6
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILA 112 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLV 112 (1027)
+.+|||+||+..+...+.-.+|..+.+.|.++||+|+++|++|+|.+. ..+.++...++.+....+..+++|+
T Consensus 7 ~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~-------~~a~~l~~~i~~~~~~~g~~~v~li 79 (285)
T d1ex9a_ 7 KYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE-------VRGEQLLQQVEEIVALSGQPKVNLI 79 (285)
T ss_dssp SSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH-------HHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcH-------HHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 334799999843322222224778999999999999999999988553 2244444444555555566789999
Q ss_pred EechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 113 GFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 113 GhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
||||||.++..++..+|+ ++++++.++++.
T Consensus 80 gHS~GG~~~r~~~~~~p~--~v~~lv~i~tPh 109 (285)
T d1ex9a_ 80 GHSHGGPTIRYVAAVRPD--LIASATSVGAPH 109 (285)
T ss_dssp EETTHHHHHHHHHHHCGG--GEEEEEEESCCT
T ss_pred EECccHHHHHHHHHHCCc--cceeEEEECCCC
Confidence 999999999999999998 899999998764
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.02 E-value=2e-09 Score=116.44 Aligned_cols=117 Identities=18% Similarity=0.163 Sum_probs=87.3
Q ss_pred ceEEEEEecCCc--eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCC
Q psy15208 4 NTKFFNINGSVG--ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASS 80 (1027)
Q Consensus 4 ~~~~i~I~t~dG--~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~ 80 (1027)
+.+++.+.+++| ++.+++|.|++. .++.|+||++||+++..|+.+. ...+...++. .||.|+.+|+|...+..
T Consensus 49 ~~~~~~~~~~~g~~~i~~~~~~P~~~--~~~~Pvvv~iHGGG~~~g~~~~--~~~~~~~la~~~G~~V~~vdYrl~pe~~ 124 (317)
T d1lzla_ 49 SLRELSAPGLDGDPEVKIRFVTPDNT--AGPVPVLLWIHGGGFAIGTAES--SDPFCVEVARELGFAVANVEYRLAPETT 124 (317)
T ss_dssp EEEEEEECCSTTCCCEEEEEEEESSC--CSCEEEEEEECCSTTTSCCGGG--GHHHHHHHHHHHCCEEEEECCCCTTTSC
T ss_pred eEEEEEEecCCCCceEEEEEECCCCC--CCCCcEEEEecCcccccccccc--cchHHHhHHhhcCCcccccccccccccc
Confidence 456788888888 589999999862 3568999999998776666543 4455666654 59999999999755432
Q ss_pred CCCCCccchHHHHHHHHHHHHHh---CC--CCcEEEEEechhHHHHHHHHHhcC
Q psy15208 81 GTYDSGNGETDDMEILLRYIQKK---YP--YLPIILAGFSFGTFVQAKLQKRLD 129 (1027)
Q Consensus 81 g~~~~~~~~~~Dv~avl~~L~~~---~~--~~pviLVGhSmGG~vAl~~A~~~p 129 (1027)
+.....|+...++++... ++ .++++++|+|.||.+++.++.+.+
T Consensus 125 -----~~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~ 173 (317)
T d1lzla_ 125 -----FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKAR 173 (317)
T ss_dssp -----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHH
T ss_pred -----ccccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhh
Confidence 335678888888888653 22 246999999999999998887643
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=98.98 E-value=1.9e-10 Score=114.08 Aligned_cols=107 Identities=21% Similarity=0.227 Sum_probs=83.7
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-c--C-----HH---HHh--
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-V--T-----ME---YAK-- 863 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~--~-----~~---e~l-- 863 (1027)
+.++.+. + ...|++|+|+|.|+||..+++.++.+|++|+++|.++.|...|...|.+. . + .. +.+
T Consensus 16 ~~a~~~~-~-~~~g~~vlV~G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~ 93 (170)
T d1e3ja2 16 VHACRRA-G-VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRS 93 (170)
T ss_dssp HHHHHHH-T-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHH
T ss_pred HHHHHHh-C-CCCCCEEEEEcccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhc
Confidence 3444443 3 35899999999999999999999999999999999999999999988752 1 1 11 112
Q ss_pred ---ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchh
Q psy15208 864 ---KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVE 906 (1027)
Q Consensus 864 ---~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~ 906 (1027)
..+|++|+++|+...+. ..++.++++|.++.+|..+.++.++
T Consensus 94 ~~g~g~D~vid~~g~~~~~~-~a~~~~~~~G~iv~~G~~~~~~~~~ 138 (170)
T d1e3ja2 94 AIGDLPNVTIDCSGNEKCIT-IGINITRTGGTLMLVGMGSQMVTVP 138 (170)
T ss_dssp HSSSCCSEEEECSCCHHHHH-HHHHHSCTTCEEEECSCCSSCCCCC
T ss_pred ccccCCceeeecCCChHHHH-HHHHHHhcCCceEEEecCCCCCCcC
Confidence 13799999999987555 4589999999999999886544433
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=98.98 E-value=1.6e-09 Score=121.18 Aligned_cols=136 Identities=20% Similarity=0.216 Sum_probs=104.7
Q ss_pred eEEEEEecCCc-eEEEEEEecCCccccCCccEEEEECCCCCCC------CCCC-hHHHHHHHHHHHhCCcEEEEEcCCCC
Q psy15208 5 TKFFNINGSVG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFG------GTMD-NKVVQTLVRVMLSLGYISIRMNFRGV 76 (1027)
Q Consensus 5 ~~~i~I~t~dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~g------Gs~~-~~~~~~la~~La~~Gy~Vla~DlrGh 76 (1027)
++.+.|+.+|| +|.+.+|.|++ .++.|+||+.|+++..+ .... .......++.|+++||.|+.+|.||+
T Consensus 28 ~~~v~ipmrDG~~L~~~v~~P~~---~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~ 104 (385)
T d2b9va2 28 KREVMVPMRDGVKLYTVIVIPKN---ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGK 104 (385)
T ss_dssp EEEEEEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTS
T ss_pred EeEEEEECCCCCEEEEEEEEcCC---CCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcc
Confidence 56789999999 89999999987 46789999988763110 0111 11223467889999999999999999
Q ss_pred CCCCCCCCC-----------ccchHHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 77 GASSGTYDS-----------GNGETDDMEILLRYIQKKYP--YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 77 G~S~g~~~~-----------~~~~~~Dv~avl~~L~~~~~--~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
|.|.+.+.. ......|..++++|+..+.+ ..+|.++|+|+||.+++.+|...|+ .+++++...+.
T Consensus 105 g~S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~--~l~a~~~~~~~ 182 (385)
T d2b9va2 105 YGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHP--ALKVAAPESPM 182 (385)
T ss_dssp TTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCT--TEEEEEEEEEC
T ss_pred cCCCCceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCC--cceEEEEeccc
Confidence 999986521 12468999999999987643 3479999999999999999998887 68888887765
Q ss_pred CC
Q psy15208 144 VK 145 (1027)
Q Consensus 144 ~~ 145 (1027)
..
T Consensus 183 ~d 184 (385)
T d2b9va2 183 VD 184 (385)
T ss_dssp CC
T ss_pred cc
Confidence 44
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.97 E-value=3.2e-09 Score=115.03 Aligned_cols=129 Identities=16% Similarity=0.100 Sum_probs=94.4
Q ss_pred ceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCC
Q psy15208 4 NTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASSGT 82 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~ 82 (1027)
+.+.+.+.+++|.+.+.+|.|++ +.|+||++||+++..|+... ...+...+++ .|+.|+.+|+|.....
T Consensus 55 ~~~~~~i~~~~g~i~~~iy~P~~-----~~P~il~iHGGg~~~g~~~~--~~~~~~~l~~~~g~~Vv~v~Yrlap~~--- 124 (311)
T d1jjia_ 55 RVEDRTIKGRNGDIRVRVYQQKP-----DSPVLVYYHGGGFVICSIES--HDALCRRIARLSNSTVVSVDYRLAPEH--- 124 (311)
T ss_dssp EEEEEEEEETTEEEEEEEEESSS-----SEEEEEEECCSTTTSCCTGG--GHHHHHHHHHHHTSEEEEEECCCTTTS---
T ss_pred eEEEEEEeCCCCcEEEEEEcCCC-----CceEEEEEcCCCCccCChhh--hhhhhhhhhhcCCcEEEEecccccccc---
Confidence 34567889999999999999975 46999999998887777654 4456666644 5999999999953222
Q ss_pred CCCccchHHHHHHHHHHHHHhC---C--CCcEEEEEechhHHHHHHHHHhcCC--cCCccEEEEEccCC
Q psy15208 83 YDSGNGETDDMEILLRYIQKKY---P--YLPIILAGFSFGTFVQAKLQKRLDK--EISIKILILISVAV 144 (1027)
Q Consensus 83 ~~~~~~~~~Dv~avl~~L~~~~---~--~~pviLVGhSmGG~vAl~~A~~~p~--~~~V~gLVli~p~~ 144 (1027)
.+.....|+...++|+.... . ..++++.|+|.||.+++.++....+ ...+.+.+++.|..
T Consensus 125 --~~p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~ 191 (311)
T d1jjia_ 125 --KFPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVV 191 (311)
T ss_dssp --CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCC
T ss_pred --ccchhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeeccee
Confidence 23456788888888887632 2 2469999999999988877654322 23467888888753
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.95 E-value=3.2e-10 Score=112.73 Aligned_cols=138 Identities=14% Similarity=0.152 Sum_probs=97.0
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcEE-cC-----HHHHh------
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFLV-VT-----MEYAK------ 863 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~v-~~-----~~e~l------ 863 (1027)
+.++.+. + .-.|++|+|+|.|++|..+++.++.+|+ +|+++|+++.|+..|...|++. .+ ..+..
T Consensus 16 ~~a~~~~-~-~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~ 93 (171)
T d1pl8a2 16 IHACRRG-G-VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQ 93 (171)
T ss_dssp HHHHHHH-T-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHH
T ss_pred HHHHHHh-C-CCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCccccccccccccccccccccc
Confidence 4455544 4 3579999999999999999999999999 7999999999999999999862 21 22221
Q ss_pred --ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCc--ccchhhhhccceeccccceeeeecCCCcEEEEecCCcc
Q psy15208 864 --KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDN--EIEVEKLKKYKWENIKPQVDHIIFPDGKKIILLAEGRL 939 (1027)
Q Consensus 864 --~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~--eid~~~l~~~~~~~~~~~v~~y~~~dg~~i~LLa~Grl 939 (1027)
..+|++|+|+|+...+. ..++.++++++++.+|.... .+++..+...+............+ .+.+.+|++|++
T Consensus 94 ~g~g~Dvvid~~G~~~~~~-~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~k~l~i~Gs~~~~~~~--~~al~li~~gki 170 (171)
T d1pl8a2 94 LGCKPEVTIECTGAEASIQ-AGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTW--PVAISMLASKSV 170 (171)
T ss_dssp HTSCCSEEEECSCCHHHHH-HHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCH--HHHHHHHHTTSC
T ss_pred CCCCceEEEeccCCchhHH-HHHHHhcCCCEEEEEecCCCCCccCHHHHHHCCcEEEEEeCCHhHH--HHHHHHHHcCCC
Confidence 14799999999987555 45899999999999998754 444443322222222221111111 356677777765
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.95 E-value=4e-10 Score=115.44 Aligned_cols=92 Identities=15% Similarity=0.228 Sum_probs=64.4
Q ss_pred ccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCcEEEE
Q psy15208 33 KGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKYPYLPIILA 112 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~~~~pviLV 112 (1027)
+++|||+||++ |+.. .|+.+++.| ++.|+++|+||+|.|.. .+.++.| .++.+....+..+++|+
T Consensus 25 ~~Pl~l~Hg~~---gs~~--~~~~l~~~L---~~~v~~~d~~g~~~~~~----~~~~a~~---~~~~~~~~~~~~~~~lv 89 (286)
T d1xkta_ 25 ERPLFLVHPIE---GSTT--VFHSLASRL---SIPTYGLQCTRAAPLDS----IHSLAAY---YIDCIRQVQPEGPYRVA 89 (286)
T ss_dssp SCCEEEECCTT---CCCG--GGHHHHHTC---SSCEEEECCCTTSCCSC----HHHHHHH---HHHHHHHHCCSSCCEEE
T ss_pred CCeEEEECCCC---ccHH--HHHHHHHHc---CCeEEEEeCCCCCCCCC----HHHHHHH---HHHHHHHhcCCCceEEe
Confidence 34478999984 3433 477888877 58999999999998763 2333443 33444555667799999
Q ss_pred EechhHHHHHHHHHhcCCcCCccEEEEEc
Q psy15208 113 GFSFGTFVQAKLQKRLDKEISIKILILIS 141 (1027)
Q Consensus 113 GhSmGG~vAl~~A~~~p~~~~V~gLVli~ 141 (1027)
||||||.+|+.+|.++|+ ++.+++.+.
T Consensus 90 GhS~Gg~vA~~~A~~~p~--~~~~v~~l~ 116 (286)
T d1xkta_ 90 GYSYGACVAFEMCSQLQA--QQSPAPTHN 116 (286)
T ss_dssp EETHHHHHHHHHHHHHHH--C------CC
T ss_pred ecCCccHHHHHHHHHHHH--cCCCceeEE
Confidence 999999999999999998 666666554
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=98.94 E-value=1.7e-09 Score=114.32 Aligned_cols=148 Identities=14% Similarity=0.077 Sum_probs=92.5
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChH--HHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCc--cchHH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNK--VVQTLVRVMLSLGYISIRMNFRGVGASSGTYDSG--NGETD 91 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~--~~~~la~~La~~Gy~Vla~DlrGhG~S~g~~~~~--~~~~~ 91 (1027)
++++..+.|.+ +.+++|||+||++..+.++.+. .+..+++.|+++||+|+++|+||||+|.+..... .....
T Consensus 45 ~~~v~~~~p~~----~~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~~~~~~~~~ 120 (318)
T d1qlwa_ 45 QMYVRYQIPQR----AKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGK 120 (318)
T ss_dssp CEEEEEEEETT----CCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTS
T ss_pred eEEEEEECCCC----CCCCcEEEECCCCCCcCccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCccccCCHHHHHH
Confidence 56777788876 2344478899987544333220 1235789999999999999999999997532100 00000
Q ss_pred HHH------------------------------------------------------------HHHHHHHHhCCCCcEEE
Q psy15208 92 DME------------------------------------------------------------ILLRYIQKKYPYLPIIL 111 (1027)
Q Consensus 92 Dv~------------------------------------------------------------avl~~L~~~~~~~pviL 111 (1027)
++. .....+... ..+...
T Consensus 121 ~~~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 198 (318)
T d1qlwa_ 121 APASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIK--LDGTVL 198 (318)
T ss_dssp SCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHH--HTSEEE
T ss_pred HHHHHHHHHhhcccccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhhhhhhHHHHHHHHhh--hccccc
Confidence 000 000000000 023567
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEccCCC---cCCCCCCCCcEEEEEeCCCCCCChHH
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISVAVK---KWLIPEVPKNTIIIHGELDEIIPLKD 171 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~---~~~l~~i~~PvLiIhG~~D~iVP~~~ 171 (1027)
..++.+....+..+...++ .+++++...+... ......+.+|+|++||++|..+|+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~ 259 (318)
T d1qlwa_ 199 LSHSQSGIYPFQTAAMNPK--GITAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWA 259 (318)
T ss_dssp EEEGGGTTHHHHHHHHCCT--TEEEEEEESCSCCCCGGGCGGGTTSCEEEEECSSCTTCTTTH
T ss_pred hhhhcccchhhhhhhhhhh--HHHHHHhhhcccccchhhhhhhccCCEEEEecCcCcccChhh
Confidence 7778877777777777777 5777777665432 22456678999999999999999644
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.80 E-value=6.3e-10 Score=110.40 Aligned_cols=109 Identities=18% Similarity=0.180 Sum_probs=83.9
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-HHH------Hhcc
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-MEY------AKKY 865 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-~~e------~l~~ 865 (1027)
...|.++.+. + .-+|++|+|+|.|.+|..+++.++.+|++|+++|.++.|...|...|++ +++ .++ ....
T Consensus 14 ~Ta~~al~~~-~-~~~g~~vlI~GaG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~ 91 (168)
T d1piwa2 14 LTVYSPLVRN-G-CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDT 91 (168)
T ss_dssp HHHHHHHHHT-T-CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSC
T ss_pred HHHHHHHHHh-C-cCCCCEEEEECCCCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEeeccchHHHHHhhhcc
Confidence 4457777654 4 3689999999999999999999999999999999999999999999985 332 211 1224
Q ss_pred CCEEEecCCCcccC-cHHHHhcCCCCeEEEEecCCCcccc
Q psy15208 866 GDIFVTCTGNYHVI-THDHMRDMKDQAIVCNIGHFDNEIE 904 (1027)
Q Consensus 866 aDvvi~atG~~~vi-~~~~~~~mk~gailvNvG~~d~eid 904 (1027)
.|++++++|...-. -...++.++++|+++++|..+....
T Consensus 92 ~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~ 131 (168)
T d1piwa2 92 FDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEM 131 (168)
T ss_dssp EEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCC
T ss_pred cceEEEEecCCccchHHHHHHHhhccceEEEecccccccc
Confidence 79999987764322 2345889999999999998754333
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=98.78 E-value=1.1e-07 Score=98.92 Aligned_cols=165 Identities=16% Similarity=0.109 Sum_probs=101.3
Q ss_pred eEEEEEecC-Cc-eEEEEEEecCCccccCCccEEEEECCCCCCCCCCCh--HHHHHHHHHHHhCC-cEEEEEcCCCCCCC
Q psy15208 5 TKFFNINGS-VG-ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDN--KVVQTLVRVMLSLG-YISIRMNFRGVGAS 79 (1027)
Q Consensus 5 ~~~i~I~t~-dG-~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~--~~~~~la~~La~~G-y~Vla~DlrGhG~S 79 (1027)
.+.+++.++ .| ++.+.+|.|++....++.|+|+++||.+++...+.. .....+...+...+ ...+.....+....
T Consensus 22 ~~~~~~~S~~~g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (255)
T d1jjfa_ 22 VVNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAA 101 (255)
T ss_dssp EEEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCC
T ss_pred EEEEEEEecCCCCEEEEEEEeCCCCCCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeecccccc
Confidence 455666654 34 789999999875445678999999997654333221 11222333333332 22222222222222
Q ss_pred CCCCCCc--cchHHHHHHHHHHHHHhCC----CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC-----
Q psy15208 80 SGTYDSG--NGETDDMEILLRYIQKKYP----YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL----- 148 (1027)
Q Consensus 80 ~g~~~~~--~~~~~Dv~avl~~L~~~~~----~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~----- 148 (1027)
....... ......+..++.++...+. ..+++++|+||||..++.++.++|+ .+++++.+++......
T Consensus 102 ~~~~~~~~~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd--~F~~v~~~sg~~~~~~~~~~~ 179 (255)
T d1jjfa_ 102 GPGIADGYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLD--KFAYIGPISAAPNTYPNERLF 179 (255)
T ss_dssp CTTCSCHHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTT--TCSEEEEESCCTTSCCHHHHC
T ss_pred cccccccccchHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCC--cccEEEEEccCcCCccccccc
Confidence 2211111 1123334556666666542 2359999999999999999999999 7999999998764331
Q ss_pred ------CCCCCCcEEEEEeCCCCCCChHH
Q psy15208 149 ------IPEVPKNTIIIHGELDEIIPLKD 171 (1027)
Q Consensus 149 ------l~~i~~PvLiIhG~~D~iVP~~~ 171 (1027)
......|+++.||++|.+++...
T Consensus 180 ~~~~~~~~~~~~~~~i~~G~~D~~~~~~~ 208 (255)
T d1jjfa_ 180 PDGGKAAREKLKLLFIACGTNDSLIGFGQ 208 (255)
T ss_dssp TTTTHHHHHHCSEEEEEEETTCTTHHHHH
T ss_pred ccHHHHhhccCCcceEEeCCCCCCchHHH
Confidence 11224789999999999987644
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=98.77 E-value=4.2e-08 Score=105.03 Aligned_cols=130 Identities=15% Similarity=0.155 Sum_probs=92.5
Q ss_pred eEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCC-cEEEEEcCCCCCCCCCCC
Q psy15208 5 TKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLG-YISIRMNFRGVGASSGTY 83 (1027)
Q Consensus 5 ~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~G-y~Vla~DlrGhG~S~g~~ 83 (1027)
.+.+.+..+++++...+|.|++. .++.|+||++||+++..|+... +..+...++.+| +.|+.+|+|.....
T Consensus 46 ~~~~~~~~~g~~i~~~~y~P~~~--~~~~Pvvv~iHGGg~~~g~~~~--~~~~~~~~a~~~~~~v~~v~Yrl~p~~---- 117 (308)
T d1u4na_ 46 VREFDMDLPGRTLKVRMYRPEGV--EPPYPALVYYHGGGWVVGDLET--HDPVCRVLAKDGRAVVFSVDYRLAPEH---- 117 (308)
T ss_dssp EEEEEEEETTEEEEEEEEECTTC--CSSEEEEEEECCSTTTSCCTTT--THHHHHHHHHHHTSEEEEECCCCTTTS----
T ss_pred EEEEEEecCCceEEEEEEecccc--CCCCCEEEEEecCeeeeecccc--ccchhhhhhhccccccccccccccccc----
Confidence 45567777666899999999863 2468999999998877666553 455666666665 57888999854332
Q ss_pred CCccchHHHHHHHHHHHHHhCC-----CCcEEEEEechhHHHHHHHHHhcCCc--CCccEEEEEccC
Q psy15208 84 DSGNGETDDMEILLRYIQKKYP-----YLPIILAGFSFGTFVQAKLQKRLDKE--ISIKILILISVA 143 (1027)
Q Consensus 84 ~~~~~~~~Dv~avl~~L~~~~~-----~~pviLVGhSmGG~vAl~~A~~~p~~--~~V~gLVli~p~ 143 (1027)
.+....+|+...++++..... ..++++.|+|.||.+++.++...++. ..+.+..+..+.
T Consensus 118 -~~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~ 183 (308)
T d1u4na_ 118 -KFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPS 183 (308)
T ss_dssp -CTTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCC
T ss_pred -ccccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCcccccccccc
Confidence 233578899999999986432 23599999999999998887765431 234566666653
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=98.72 E-value=1.8e-08 Score=100.56 Aligned_cols=115 Identities=16% Similarity=0.181 Sum_probs=89.5
Q ss_pred hhhh-hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH------
Q psy15208 790 YGCR-ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME------ 860 (1027)
Q Consensus 790 ~g~~-~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~------ 860 (1027)
++|. -..|.++.+..+ .-.|++|+|+|+|+||...++.++.+|+ +|+++|.++.|+..|...|++ +.+..
T Consensus 9 l~Ca~~T~~~a~~~~a~-v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~ 87 (174)
T d1e3ia2 9 IGCGFSSGYGAAINTAK-VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPV 87 (174)
T ss_dssp GGTHHHHHHHHHHTTSC-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCH
T ss_pred hhhHHHHHHHHHHHhhC-CCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCccchhhh
Confidence 3554 334666655445 4689999999999999999999999999 799999999999999999985 33321
Q ss_pred -HHh-----ccCCEEEecCCCcccCcHHHHhcCCCC-eEEEEecCCCcccchh
Q psy15208 861 -YAK-----KYGDIFVTCTGNYHVITHDHMRDMKDQ-AIVCNIGHFDNEIEVE 906 (1027)
Q Consensus 861 -e~l-----~~aDvvi~atG~~~vi~~~~~~~mk~g-ailvNvG~~d~eid~~ 906 (1027)
... ..+|++|+|+|++..+. +.++.++++ +.++.+|.+..++.++
T Consensus 88 ~~~~~~~~~~G~d~vie~~G~~~~~~-~a~~~~~~g~G~~v~vG~~~~~~~i~ 139 (174)
T d1e3ia2 88 QDVITELTAGGVDYSLDCAGTAQTLK-AAVDCTVLGWGSCTVVGAKVDEMTIP 139 (174)
T ss_dssp HHHHHHHHTSCBSEEEESSCCHHHHH-HHHHTBCTTTCEEEECCCSSSEEEEE
T ss_pred hhhHhhhhcCCCcEEEEecccchHHH-HHHHHhhcCCeEEEecCCCCCccccc
Confidence 111 24799999999998655 458999996 9999999986655544
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=98.70 E-value=1.1e-09 Score=108.94 Aligned_cols=112 Identities=13% Similarity=0.129 Sum_probs=85.9
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-H----HHHhc--
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-M----EYAKK-- 864 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-~----~e~l~-- 864 (1027)
-..|.++.+......+|++|+|+|.|.+|..+++.++.+|+ +|+++|.++.|...+...|.+ +++ . ++..+
T Consensus 17 ~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~ 96 (172)
T d1h2ba2 17 ITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELT 96 (172)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHT
T ss_pred HHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCcccHHHHHHHhh
Confidence 34567776654334689999999999999999999999998 788899999999999998875 332 1 22221
Q ss_pred ---cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC-cccchh
Q psy15208 865 ---YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD-NEIEVE 906 (1027)
Q Consensus 865 ---~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d-~eid~~ 906 (1027)
..|++|+++|+...+. ..++.++++|+++.+|..+ .+++..
T Consensus 97 ~~~g~d~vid~~g~~~~~~-~a~~~l~~~G~iv~~G~~~~~~~~~~ 141 (172)
T d1h2ba2 97 RGRGVNVAMDFVGSQATVD-YTPYLLGRMGRLIIVGYGGELRFPTI 141 (172)
T ss_dssp TTCCEEEEEESSCCHHHHH-HGGGGEEEEEEEEECCCSSCCCCCHH
T ss_pred CCCCceEEEEecCcchHHH-HHHHHHhCCCEEEEEeCcccccCCHH
Confidence 3799999999987555 4489999999999999753 344443
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=98.67 E-value=5.3e-08 Score=97.17 Aligned_cols=91 Identities=19% Similarity=0.227 Sum_probs=76.6
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcC-----------------------------
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT----------------------------- 858 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~----------------------------- 858 (1027)
+..-+|+|+|.|-.|...++.++++||+|.++|+++.++.+....+...++
T Consensus 27 V~pa~VvViGaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~ 106 (183)
T d1l7da1 27 VPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 106 (183)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred cCCcEEEEEcCcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence 456799999999999999999999999999999999988888777755432
Q ss_pred -HHHHhccCCEEEecC---C--CcccCcHHHHhcCCCCeEEEEecC
Q psy15208 859 -MEYAKKYGDIFVTCT---G--NYHVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 859 -~~e~l~~aDvvi~at---G--~~~vi~~~~~~~mk~gailvNvG~ 898 (1027)
+.+.++++|+||++. | .+.++++++++.||+|++++++..
T Consensus 107 ~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvai 152 (183)
T d1l7da1 107 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV 152 (183)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred HHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEee
Confidence 223467899999865 3 457999999999999999998865
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.65 E-value=3.4e-09 Score=104.51 Aligned_cols=109 Identities=17% Similarity=0.163 Sum_probs=84.5
Q ss_pred hHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh----c
Q psy15208 795 SLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK----K 864 (1027)
Q Consensus 795 s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l----~ 864 (1027)
..|.++.+. + ..+|++|+|+|.|+||..+++.++.+|++|+++|.++.|...+...|++ +.+ ..+.+ .
T Consensus 15 Ta~~al~~~-~-~~~g~~VlV~GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~ 92 (166)
T d1llua2 15 TVYKGLKQT-N-ARPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIG 92 (166)
T ss_dssp HHHHHHHHH-T-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHS
T ss_pred HHHHHHHHh-C-CCCCCEEEEeeccccHHHHHHHHHHcCCccceecchhhHHHhhhccCccccccccchhHHHHHHHhhc
Confidence 356776654 4 3589999999999999999999999999999999999999999999986 221 22222 2
Q ss_pred cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchh
Q psy15208 865 YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVE 906 (1027)
Q Consensus 865 ~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~ 906 (1027)
..|.++.+++....+. ..++.++++++++.+|....++.++
T Consensus 93 g~~~~i~~~~~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~ 133 (166)
T d1llua2 93 GAHGVLVTAVSNSAFG-QAIGMARRGGTIALVGLPPGDFPTP 133 (166)
T ss_dssp SEEEEEECCSCHHHHH-HHHTTEEEEEEEEECCCCSSEEEEE
T ss_pred CCcccccccccchHHH-HHHHHhcCCcEEEEEEecCCCccCC
Confidence 3566677887777555 5589999999999999875544443
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=98.65 E-value=4e-09 Score=105.17 Aligned_cols=107 Identities=18% Similarity=0.145 Sum_probs=84.1
Q ss_pred hh-hhhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHHH
Q psy15208 791 GC-RESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEYA 862 (1027)
Q Consensus 791 g~-~~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~ 862 (1027)
+| ....|.++.+..+ .-+|++|+|+|+|.||..+++.++.+|+ +|+++|.++.|...+...|++ +.+ ..+.
T Consensus 10 ~ca~~Ta~~a~~~~~~-~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~ 88 (174)
T d1f8fa2 10 GCGIQTGAGACINALK-VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAA 88 (174)
T ss_dssp GTHHHHHHHHHHTTTC-CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHH
T ss_pred hhHHHHHHHHHHHhhC-CCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeCCCcCHHHH
Confidence 44 3445666666555 3689999999999999999999999999 567789999999999999974 432 2222
Q ss_pred hc-----cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 863 KK-----YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 863 l~-----~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+. ..|++|+|+|+...+. ..++.+++++.++.+|..
T Consensus 89 i~~~t~gg~D~vid~~G~~~~~~-~~~~~~~~~G~i~~~G~~ 129 (174)
T d1f8fa2 89 IKEITDGGVNFALESTGSPEILK-QGVDALGILGKIAVVGAP 129 (174)
T ss_dssp HHHHTTSCEEEEEECSCCHHHHH-HHHHTEEEEEEEEECCCC
T ss_pred HHHHcCCCCcEEEEcCCcHHHHH-HHHhcccCceEEEEEeec
Confidence 22 2699999999987554 558999999999999975
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.64 E-value=1.5e-07 Score=99.76 Aligned_cols=130 Identities=9% Similarity=-0.075 Sum_probs=90.3
Q ss_pred eEEEEEecCCc--eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHH---HHHHHHHhCCcEEEEEcCCCCCCC
Q psy15208 5 TKFFNINGSVG--ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQ---TLVRVMLSLGYISIRMNFRGVGAS 79 (1027)
Q Consensus 5 ~~~i~I~t~dG--~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~---~la~~La~~Gy~Vla~DlrGhG~S 79 (1027)
.+++.+.++.. ++.+.++.|. ++.|+|+++||++. +.+...|. .+.+.+.+.|+.++.++..+.+..
T Consensus 9 v~~~~~~s~~~~r~~~~~v~~p~-----~~~Pvl~llhG~~~---~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 80 (288)
T d1sfra_ 9 VEYLQVPSPSMGRDIKVQFQSGG-----ANSPALYLLDGLRA---QDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFY 80 (288)
T ss_dssp CEEEEEEETTTTEEEEEEEECCS-----TTBCEEEEECCTTC---CSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTT
T ss_pred EEEEEEECCCCCcEEEEEEeCCC-----CCceEEEEcCCCCC---CCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCC
Confidence 34566665443 5666666664 37899999999642 22221232 356778888999999998776654
Q ss_pred CCCCCC---------ccchHHHHHHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 80 SGTYDS---------GNGETDDMEILLRYIQKKYPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 80 ~g~~~~---------~~~~~~Dv~avl~~L~~~~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
...+.. ......-+.+++.++.++++.+ ++.+.|+||||..|+.++.++|+ ++++++.+++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd--~f~av~~~Sg~~ 154 (288)
T d1sfra_ 81 SDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQ--QFVYAGAMSGLL 154 (288)
T ss_dssp CBCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTT--TEEEEEEESCCS
T ss_pred ccccCcccccccccchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccc--cccEEEEecCcc
Confidence 422111 1122333567788887776543 59999999999999999999999 799999999765
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=98.63 E-value=3.4e-08 Score=97.30 Aligned_cols=91 Identities=20% Similarity=0.238 Sum_probs=75.1
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcC---cEE--c---CHHHHhccCCEEEecC---C--
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEG---FLV--V---TMEYAKKYGDIFVTCT---G-- 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G---~~v--~---~~~e~l~~aDvvi~at---G-- 874 (1027)
....+|+|+|.|..|+..++.++++||+|.++|.++.++.+..... .+. . .+++.+.++|+||++. |
T Consensus 30 v~pa~V~ViGaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~~ 109 (168)
T d1pjca1 30 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRR 109 (168)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSS
T ss_pred CCCcEEEEECCChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCcc
Confidence 3568999999999999999999999999999999998776544332 221 1 2677788999999864 3
Q ss_pred CcccCcHHHHhcCCCCeEEEEecC
Q psy15208 875 NYHVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 875 ~~~vi~~~~~~~mk~gailvNvG~ 898 (1027)
.+.+|++++++.||+|++++++..
T Consensus 110 aP~lIt~~mv~~Mk~GSVIVDvai 133 (168)
T d1pjca1 110 APILVPASLVEQMRTGSVIVDVAV 133 (168)
T ss_dssp CCCCBCHHHHTTSCTTCEEEETTC
T ss_pred cCeeecHHHHhhcCCCcEEEEeec
Confidence 458999999999999999998876
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=98.61 E-value=2.9e-08 Score=99.28 Aligned_cols=104 Identities=20% Similarity=0.195 Sum_probs=82.9
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHHH---h
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEYA---K 863 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~---l 863 (1027)
-..|.++.+... ..+|++|+|+|+|+||..+++.++.+|+ +|+++|.++.|...|...|++ +.+ ..+. +
T Consensus 14 ~ta~~al~~~~~-~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i 92 (182)
T d1vj0a2 14 ATAYHAFDEYPE-SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAI 92 (182)
T ss_dssp HHHHHHHHTCSS-CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccccchHHHHHHH
Confidence 345666655433 4689999999999999999999999999 899999999999999999985 332 2121 1
Q ss_pred c------cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 864 K------YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 864 ~------~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
. .+|+||+|+|++..+. ..++.++++|+++.+|..
T Consensus 93 ~~~~~~~g~Dvvid~vG~~~~~~-~a~~~l~~~G~iv~~G~~ 133 (182)
T d1vj0a2 93 MDITHGRGADFILEATGDSRALL-EGSELLRRGGFYSVAGVA 133 (182)
T ss_dssp HHHTTTSCEEEEEECSSCTTHHH-HHHHHEEEEEEEEECCCC
T ss_pred HHhhCCCCceEEeecCCchhHHH-HHHHHhcCCCEEEEEeec
Confidence 1 3799999999886544 558999999999999975
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.61 E-value=5.9e-07 Score=93.49 Aligned_cols=134 Identities=11% Similarity=0.106 Sum_probs=85.7
Q ss_pred ceEEEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCCh--HHHHHHHHHHH----hCCcEEEEEcCCCCC
Q psy15208 4 NTKFFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDN--KVVQTLVRVML----SLGYISIRMNFRGVG 77 (1027)
Q Consensus 4 ~~~~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~--~~~~~la~~La----~~Gy~Vla~DlrGhG 77 (1027)
+.+.+++++.+|+..+.+|.|++..+.++.|+|+++||.+.+..++.. .....++..+. ...+.|+.++..+..
T Consensus 26 ~v~~~~~~~~~~~r~~~vylP~~y~~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 105 (273)
T d1wb4a1 26 RIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGN 105 (273)
T ss_dssp EEEEEEEEETTEEEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCSTT
T ss_pred eEEEEEEecCCCeEEEEEEeCCCCCCCCCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCCCC
Confidence 345677888889889999999875445678999999997533222110 11223333332 236788888877644
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHHh--------------CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccC
Q psy15208 78 ASSGTYDSGNGETDDMEILLRYIQKK--------------YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVA 143 (1027)
Q Consensus 78 ~S~g~~~~~~~~~~Dv~avl~~L~~~--------------~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~ 143 (1027)
.....+ ............... .+..++.+.|+||||.+++.+|.++|+ .+++++..++.
T Consensus 106 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd--~f~a~~~~sg~ 178 (273)
T d1wb4a1 106 CTAQNF-----YQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLD--YVAYFMPLSGD 178 (273)
T ss_dssp CCTTTH-----HHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTT--TCCEEEEESCC
T ss_pred Cccccc-----hhcccccccchhhhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCC--cceEEEEeCcc
Confidence 332221 112222222222221 123469999999999999999999999 78999999986
Q ss_pred C
Q psy15208 144 V 144 (1027)
Q Consensus 144 ~ 144 (1027)
.
T Consensus 179 ~ 179 (273)
T d1wb4a1 179 Y 179 (273)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=98.58 E-value=2.3e-08 Score=99.66 Aligned_cols=109 Identities=15% Similarity=0.160 Sum_probs=83.4
Q ss_pred hhhhh-hHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-------
Q psy15208 790 YGCRE-SLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM------- 859 (1027)
Q Consensus 790 ~g~~~-s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~------- 859 (1027)
.||.- ..|.++.+..+ ...|++|+|+|+|++|...++.++.+|+ +|+++|.++.|+..|...|.+ +.+.
T Consensus 8 lgCa~~Ta~~a~~~~a~-~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~~~ 86 (174)
T d1p0fa2 8 IGCGFATGYGAAVNTAK-VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPI 86 (174)
T ss_dssp GGTHHHHHHHHHHTTTC-CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCH
T ss_pred hhhHHHHHHHHHHHhhC-CCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCCchhHH
Confidence 35543 34666655444 4789999999999999999999999998 799999999999999999986 4331
Q ss_pred HHHhc-----cCCEEEecCCCcccCcHHHHhcCCC-CeEEEEecCCC
Q psy15208 860 EYAKK-----YGDIFVTCTGNYHVITHDHMRDMKD-QAIVCNIGHFD 900 (1027)
Q Consensus 860 ~e~l~-----~aDvvi~atG~~~vi~~~~~~~mk~-gailvNvG~~d 900 (1027)
++... ..|++|+++|+...+... +..+++ ++.++-+|..+
T Consensus 87 ~~~~~~~~~~G~d~vid~~g~~~~~~~~-~~~~~~~~G~~v~vG~~~ 132 (174)
T d1p0fa2 87 YEVICEKTNGGVDYAVECAGRIETMMNA-LQSTYCGSGVTVVLGLAS 132 (174)
T ss_dssp HHHHHHHTTSCBSEEEECSCCHHHHHHH-HHTBCTTTCEEEECCCCC
T ss_pred HHHHHHhcCCCCcEEEEcCCCchHHHHH-HHHHHHhcCceEEEEEec
Confidence 22221 479999999998765544 555655 58999999763
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.58 E-value=4.5e-08 Score=101.63 Aligned_cols=167 Identities=8% Similarity=-0.039 Sum_probs=98.1
Q ss_pred ceEEEEEecC--CceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCc----EEEEEcCCCCC
Q psy15208 4 NTKFFNINGS--VGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGY----ISIRMNFRGVG 77 (1027)
Q Consensus 4 ~~~~i~I~t~--dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy----~Vla~DlrGhG 77 (1027)
+.+.+.+.++ ++++.+++|.|.+.+ .++.|+||++||.++.... ......+.|.++|. .++.++.....
T Consensus 14 ~~~~~~~~S~~lg~~~~~~v~~P~~~~-~~~~Pvvv~lhG~~~~~~~----~~~~~l~~l~~~~~~~~~i~v~~~~~~~~ 88 (246)
T d3c8da2 14 PAKEIIWKSERLKNSRRVWIFTTGDVT-AEERPLAVLLDGEFWAQSM----PVWPVLTSLTHRQQLPPAVYVLIDAIDTT 88 (246)
T ss_dssp CCEEEEEEETTTTEEEEEEEEEC------CCCCEEEESSHHHHHHTS----CCHHHHHHHHHTTSSCSCEEEEECCCSHH
T ss_pred CcEEEEEECCCCCCEEEEEEEECCCCC-CCCCCEEEEeCCcchhccC----cHHHHHHHHHHhCCCCceEEeeccccccc
Confidence 4556677765 448888999998643 3568999999995332111 12234455555553 33333322111
Q ss_pred CCCCCCCCccchHHH-HHHHHHHHHHhCC----CCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcC-----
Q psy15208 78 ASSGTYDSGNGETDD-MEILLRYIQKKYP----YLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKW----- 147 (1027)
Q Consensus 78 ~S~g~~~~~~~~~~D-v~avl~~L~~~~~----~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~----- 147 (1027)
............... ...++.++...+. .+++.++|+||||..++.++.++|+ .+++++.+++.....
T Consensus 89 ~~~~~~~~~~~~~~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~--~F~a~~~~sg~~~~~~~~~~ 166 (246)
T d3c8da2 89 HRAHELPCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPE--RFGCVLSQSGSYWWPHRGGQ 166 (246)
T ss_dssp HHHHHSSSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTT--TCCEEEEESCCTTTTCTTSS
T ss_pred ccccccCccHHHHHHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCc--hhcEEEcCCcccccccCCcc
Confidence 000000111112222 2344444444443 2458999999999999999999999 799999999864321
Q ss_pred ------------CCCCCCCcEEEEEeCCCCCCChHHHHhhhCC
Q psy15208 148 ------------LIPEVPKNTIIIHGELDEIIPLKDVFLWANP 178 (1027)
Q Consensus 148 ------------~l~~i~~PvLiIhG~~D~iVP~~~~~~l~~~ 178 (1027)
.......|+++.+|..|..+. ...+++++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~l~~G~~D~~~~-~~~~~l~~~ 208 (246)
T d3c8da2 167 QEGVLLEKLKAGEVSAEGLRIVLEAGIREPMIM-RANQALYAQ 208 (246)
T ss_dssp SCCHHHHHHHTTSSCCCSCEEEEEEESSCHHHH-HHHHHHHHH
T ss_pred chHHHHHHhhhhhhhccCCCeEEEecCCCcchh-HHHHHHHHH
Confidence 244567899999999998663 445555443
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=98.57 E-value=1.4e-07 Score=96.13 Aligned_cols=110 Identities=23% Similarity=0.303 Sum_probs=87.0
Q ss_pred hhhhhHHHHHh---hhcCc-cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhc-c
Q psy15208 791 GCRESLIDGIK---RATDV-MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKK-Y 865 (1027)
Q Consensus 791 g~~~s~~~~i~---r~t~~-~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~-~ 865 (1027)
.|+.+++.++. +..+. .|.||+|+|.|+|.+|+.+|+.|..+|++|+++|.|+.+...+...|.+..+.++.+. .
T Consensus 4 ~Ta~Gv~~~~~~~~~~~g~~~L~gk~v~IqG~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~~~~~~~~~~ 83 (201)
T d1c1da1 4 TTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTP 83 (201)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCC
T ss_pred chHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhcccccCcccccccc
Confidence 34555443332 22354 6999999999999999999999999999999999999998889999999999999886 7
Q ss_pred CCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccc
Q psy15208 866 GDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIE 904 (1027)
Q Consensus 866 aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid 904 (1027)
+||++.|. ..++|+.+..+.|+-. +| ++..+..+.
T Consensus 84 ~DI~iPcA-~~~~I~~~~a~~i~ak--~i-~e~AN~p~~ 118 (201)
T d1c1da1 84 CDVFAPCA-MGGVITTEVARTLDCS--VV-AGAANNVIA 118 (201)
T ss_dssp CSEEEECS-CSCCBCHHHHHHCCCS--EE-CCSCTTCBC
T ss_pred ceeeeccc-ccccccHHHHhhhhhh--ee-eccCCCCcc
Confidence 99999875 4567999999999754 33 355555444
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.57 E-value=5.3e-09 Score=102.90 Aligned_cols=110 Identities=15% Similarity=0.103 Sum_probs=84.8
Q ss_pred HHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc-C-----HHHH----hcc
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV-T-----MEYA----KKY 865 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~-----~~e~----l~~ 865 (1027)
.|.++.+. + ..+|++|+|.|.|+||..+++.++..|++|++++.++.|...+...|++.+ + ..+. -..
T Consensus 16 a~~al~~~-~-~~~g~~vlv~G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~~~~~~~~~ 93 (168)
T d1rjwa2 16 TYKALKVT-G-AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGG 93 (168)
T ss_dssp HHHHHHHH-T-CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSS
T ss_pred HHHHHHHh-C-CCCCCEEEEeecccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceecccccchhhhhcccccCC
Confidence 45555543 4 358999999999999999999999999999999999999999999998632 2 2222 223
Q ss_pred CCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhh
Q psy15208 866 GDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKL 908 (1027)
Q Consensus 866 aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l 908 (1027)
.|.+|.+++....+. ..++.|++++.++.+|..+.++.++..
T Consensus 94 ~~~~v~~~~~~~~~~-~a~~~l~~~G~i~~~g~~~~~~~~~~~ 135 (168)
T d1rjwa2 94 VHAAVVTAVSKPAFQ-SAYNSIRRGGACVLVGLPPEEMPIPIF 135 (168)
T ss_dssp EEEEEESSCCHHHHH-HHHHHEEEEEEEEECCCCSSEEEEEHH
T ss_pred CceEEeecCCHHHHH-HHHHHhccCCceEecccccCCCCCCHH
Confidence 566667777776555 559999999999999988666655533
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=98.57 E-value=2.8e-07 Score=102.59 Aligned_cols=106 Identities=17% Similarity=0.128 Sum_probs=73.1
Q ss_pred CccEEEEECCCCCCCCCCChH-HHHHH---HHHHHhCCcEEEEEcCCCCCCCCCCCCC--------------c-cchHHH
Q psy15208 32 LKGVVLIAHPHPLFGGTMDNK-VVQTL---VRVMLSLGYISIRMNFRGVGASSGTYDS--------------G-NGETDD 92 (1027)
Q Consensus 32 ~~pvVVllHG~~~~gGs~~~~-~~~~l---a~~La~~Gy~Vla~DlrGhG~S~g~~~~--------------~-~~~~~D 92 (1027)
..++||++|++. |+.... +|..+ .+.|--..|-|+++|..|.|.++..+.+ + .-...|
T Consensus 43 ~~NaVlv~h~lt---g~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~~yg~~FP~~ti~D 119 (376)
T d2vata1 43 RDNCVIVCHTLT---SSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRD 119 (376)
T ss_dssp SCCEEEEECCTT---CCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHH
T ss_pred CCCEEEEcCCCc---CCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCcccccCCcccccCCcchhHH
Confidence 468899999983 333322 33232 1233335799999999999875421100 1 123567
Q ss_pred HHHHHHHHHHhCCCCcE-EEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 93 MEILLRYIQKKYPYLPI-ILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 93 v~avl~~L~~~~~~~pv-iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+..+...+.+.++..++ .++|.||||+.|+.+|..+|+ .++.+|.++.
T Consensus 120 ~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd--~v~~li~Ia~ 168 (376)
T d2vata1 120 DVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPE--YVRKIVPIAT 168 (376)
T ss_dssp HHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTT--TBCCEEEESC
T ss_pred HHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHhchH--HHhhhccccc
Confidence 66666666666677675 688999999999999999999 7999998874
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=98.52 E-value=3.4e-07 Score=101.22 Aligned_cols=122 Identities=12% Similarity=0.011 Sum_probs=80.9
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCC----hHHHHHH---HHHHHhCCcEEEEEcCCCCCCCCCCCC----
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMD----NKVVQTL---VRVMLSLGYISIRMNFRGVGASSGTYD---- 84 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~----~~~~~~l---a~~La~~Gy~Vla~DlrGhG~S~g~~~---- 84 (1027)
++.+..|.-.+ ....++||++|++..+..... ..+|..+ ...|-...|-|+++|+.|.|.++..+.
T Consensus 25 ~laY~t~G~ln---~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p 101 (357)
T d2b61a1 25 NVAYQTYGTLN---DEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINP 101 (357)
T ss_dssp EEEEEEESCCC---TTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCT
T ss_pred eEEEEeecccC---CCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCC
Confidence 45555554333 134589999999843221111 1123333 233434569999999999887542111
Q ss_pred -C-------c-cchHHHHHHHHHHHHHhCCCCcE-EEEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 85 -S-------G-NGETDDMEILLRYIQKKYPYLPI-ILAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 85 -~-------~-~~~~~Dv~avl~~L~~~~~~~pv-iLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
+ + .-...|...+...|.+.++..++ .++|.||||+.|+.+|.++|+ .++.+|.++.
T Consensus 102 ~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd--~v~~~i~i~~ 167 (357)
T d2b61a1 102 QTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPD--FMDNIVNLCS 167 (357)
T ss_dssp TTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTT--SEEEEEEESC
T ss_pred CCCCCCCcccccchhHHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhhH--HHhhhccccc
Confidence 1 1 12467777776777777888786 777999999999999999999 8999999885
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=98.52 E-value=2.8e-08 Score=99.11 Aligned_cols=101 Identities=23% Similarity=0.321 Sum_probs=81.8
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-----HHHhc-----
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-----EYAKK----- 864 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-----~e~l~----- 864 (1027)
|.++.+. +. -+|++|+|+|+|+||..+++.++.+|+ +|+++|.++.|...|...|++ +++. .+.+.
T Consensus 17 ~~a~~~a-~~-~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~~~~~~~~v~~~t~g 94 (174)
T d1jqba2 17 FHGAELA-DI-EMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNG 94 (174)
T ss_dssp HHHHHHT-TC-CTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGGGSCHHHHHHHHTTT
T ss_pred HHHHHHh-CC-CCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccccchhHHHHHHHHhhc
Confidence 5555543 43 589999999999999999999999999 799999999999999999974 3332 22221
Q ss_pred -cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 865 -YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 865 -~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
.+|++|+|+|+...++ +.++.+++++.++.+|..+
T Consensus 95 ~G~D~vid~~g~~~~~~-~a~~~~~~~G~iv~~G~~~ 130 (174)
T d1jqba2 95 KGVDRVIMAGGGSETLS-QAVKMVKPGGIISNINYHG 130 (174)
T ss_dssp SCEEEEEECSSCTTHHH-HHHHHEEEEEEEEECCCCC
T ss_pred cCcceEEEccCCHHHHH-HHHHHHhcCCEEEEEeecC
Confidence 2799999999887665 4589999999999999864
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=98.50 E-value=9.9e-08 Score=94.11 Aligned_cols=102 Identities=19% Similarity=0.169 Sum_probs=82.6
Q ss_pred hHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC------HHHHhccCC
Q psy15208 795 SLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT------MEYAKKYGD 867 (1027)
Q Consensus 795 s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~------~~e~l~~aD 867 (1027)
..|.++.+ .+ .-.|++|+|+|.|.||...++.++.+|++|++++.++.+...+...|++ +.+ ........|
T Consensus 18 Tay~al~~-~~-~~~G~~VlI~GaG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~i~~~~~~~~~~~~~~~D 95 (168)
T d1uufa2 18 TTYSPLRH-WQ-AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFD 95 (168)
T ss_dssp HHHHHHHH-TT-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEE
T ss_pred HHHHHHHH-hC-CCCCCEEEEeccchHHHHHHHHhhcccccchhhccchhHHHHHhccCCcEEEECchhhHHHHhcCCCc
Confidence 34666654 34 3689999999999999999999999999999999999888889999986 322 111223589
Q ss_pred EEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 868 IFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 868 vvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
++++++|+...++ ..++.++++++++.+|..
T Consensus 96 ~vid~~g~~~~~~-~~~~~l~~~G~iv~~G~~ 126 (168)
T d1uufa2 96 FILNTVAAPHNLD-DFTTLLKRDGTMTLVGAP 126 (168)
T ss_dssp EEEECCSSCCCHH-HHHTTEEEEEEEEECCCC
T ss_pred eeeeeeecchhHH-HHHHHHhcCCEEEEeccC
Confidence 9999999887555 458999999999999976
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=98.49 E-value=1.5e-06 Score=96.14 Aligned_cols=122 Identities=14% Similarity=0.047 Sum_probs=81.0
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCC--------CChHHHHHH---HHHHHhCCcEEEEEcCCCCCCCCCCC-
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGT--------MDNKVVQTL---VRVMLSLGYISIRMNFRGVGASSGTY- 83 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs--------~~~~~~~~l---a~~La~~Gy~Vla~DlrGhG~S~g~~- 83 (1027)
++.+..|.-.+ ....++||++|++..+.-. ..+.+|..+ .+.|-..-|-|+++|..|.|.|+...
T Consensus 28 ~l~Y~t~G~ln---~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~~~ 104 (362)
T d2pl5a1 28 VIAYETYGTLS---SSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPL 104 (362)
T ss_dssp EEEEEEEECCC---TTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTT
T ss_pred eEEEEeeeccC---CCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccCcc
Confidence 44455554333 1345899999998432100 001123222 22233456999999999998865321
Q ss_pred ----CC-------c-cchHHHHHHHHHHHHHhCCCCcEE-EEEechhHHHHHHHHHhcCCcCCccEEEEEcc
Q psy15208 84 ----DS-------G-NGETDDMEILLRYIQKKYPYLPII-LAGFSFGTFVQAKLQKRLDKEISIKILILISV 142 (1027)
Q Consensus 84 ----~~-------~-~~~~~Dv~avl~~L~~~~~~~pvi-LVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p 142 (1027)
.+ + .-...|+.+....+.+.++..++. ++|.||||+.|+.+|.+||+ .++.+|.++.
T Consensus 105 s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd--~v~~~v~ia~ 174 (362)
T d2pl5a1 105 SIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPN--SLSNCIVMAS 174 (362)
T ss_dssp SBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTT--SEEEEEEESC
T ss_pred ccccccccccCcCCccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCch--Hhhhhccccc
Confidence 11 1 124778887777788888877755 77999999999999999999 8999999985
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=98.47 E-value=2.6e-07 Score=92.13 Aligned_cols=108 Identities=13% Similarity=0.174 Sum_probs=83.3
Q ss_pred hhh-hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHHH------
Q psy15208 791 GCR-ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTMEY------ 861 (1027)
Q Consensus 791 g~~-~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~e------ 861 (1027)
+|. -..|.++.+..+ ...|++|+|+|+|.+|...++.++.+|+ +|+++|.++.|+..|...|++ +++..+
T Consensus 11 ~Ca~~T~~~Av~~~~~-~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~ 89 (176)
T d1d1ta2 11 GCGFSTGYGAAVKTGK-VKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPIS 89 (176)
T ss_dssp GTHHHHHHHHHHTTSC-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHH
T ss_pred hhHHHHHHHHHHHhhC-CCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccchHHH
Confidence 444 334667666545 4689999999999999999999999996 899999999999999999997 333111
Q ss_pred -Hh-----ccCCEEEecCCCcccCcHHHHhcC-CCCeEEEEecCCC
Q psy15208 862 -AK-----KYGDIFVTCTGNYHVITHDHMRDM-KDQAIVCNIGHFD 900 (1027)
Q Consensus 862 -~l-----~~aDvvi~atG~~~vi~~~~~~~m-k~gailvNvG~~d 900 (1027)
.. ...|++++++|....+... +..+ +.++.++.+|...
T Consensus 90 ~~~~~~~g~G~d~vi~~~g~~~~~~~a-~~~~~~~~G~~v~vG~~~ 134 (176)
T d1d1ta2 90 EVLSEMTGNNVGYTFEVIGHLETMIDA-LASCHMNYGTSVVVGVPP 134 (176)
T ss_dssp HHHHHHHTSCCCEEEECSCCHHHHHHH-HTTSCTTTCEEEECSCCC
T ss_pred HHHHHhccccceEEEEeCCchHHHHHH-HHHhhcCCeEEEEEEccc
Confidence 11 2489999999988755443 5555 5559999999874
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.43 E-value=2.8e-06 Score=89.32 Aligned_cols=129 Identities=8% Similarity=-0.062 Sum_probs=84.9
Q ss_pred ceEEEEEecCCc--eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHH---HHHHHHHhCCcEEEEEcCCCCC-
Q psy15208 4 NTKFFNINGSVG--ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQ---TLVRVMLSLGYISIRMNFRGVG- 77 (1027)
Q Consensus 4 ~~~~i~I~t~dG--~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~---~la~~La~~Gy~Vla~DlrGhG- 77 (1027)
+.+++++.++.. .+...++.|. .|+|.|+||.+. +.... .|. .+.+.+...++.|+.+|--..+
T Consensus 3 ~~e~~~v~s~~~~r~~~~~v~~~~-------~pvlylLhG~~g-~~~~~--~w~~~~~~~~~~~~~~~iVV~p~g~~~~~ 72 (267)
T d1r88a_ 3 PYENLMVPSPSMGRDIPVAFLAGG-------PHAVYLLDAFNA-GPDVS--NWVTAGNAMNTLAGKGISVVAPAGGAYSM 72 (267)
T ss_dssp CCEEEEEEETTTTEEEEEEEECCS-------SSEEEEECCSSC-CSSSC--HHHHTSCHHHHHTTSSSEEEEECCCTTST
T ss_pred ceEEEEEecccCCceeeEEEECCC-------CCEEEEcCCCCC-CCCcc--hhhhccHHHHHHhhCCeEEEEECCCCCcC
Confidence 456778887655 4766665442 389999999632 11222 233 2567778889999999852211
Q ss_pred CCCCCCCCccchHHHH-HHHHHHHHHhCCC--CcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 78 ASSGTYDSGNGETDDM-EILLRYIQKKYPY--LPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 78 ~S~g~~~~~~~~~~Dv-~avl~~L~~~~~~--~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
.+.........+...+ ++++.++.+.++. .+..+.|+||||..|+.++.++|+ .+++++.+++..
T Consensus 73 y~~~~~~~~~~~~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd--~F~av~~~SG~~ 140 (267)
T d1r88a_ 73 YTNWEQDGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPD--RFGFAGSMSGFL 140 (267)
T ss_dssp TSBCSSCTTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTT--TEEEEEEESCCC
T ss_pred CccccccccccHHHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcc--cccEEEEeCCcc
Confidence 1111111111222223 3577777777754 359999999999999999999999 899999999865
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=98.41 E-value=1.8e-08 Score=99.49 Aligned_cols=109 Identities=15% Similarity=0.189 Sum_probs=84.2
Q ss_pred HHHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcC-----HHHH-h---
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVT-----MEYA-K--- 863 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~-l--- 863 (1027)
.+.++.+. + .-+|++|+|+|+ |.+|..+++.++..|+ +|++++.++.|...+...|++ +.+ ..+. .
T Consensus 16 a~~al~~~-~-~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~ 93 (170)
T d1jvba2 16 TYRAVRKA-S-LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRIT 93 (170)
T ss_dssp HHHHHHHT-T-CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHT
T ss_pred HHHHHHHh-C-CCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeeccCCcCHHHHHHHHh
Confidence 45666553 4 368999999995 9999999999999996 899999999999999999975 221 2222 2
Q ss_pred --ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCc--ccchhh
Q psy15208 864 --KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDN--EIEVEK 907 (1027)
Q Consensus 864 --~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~--eid~~~ 907 (1027)
...|++++++|+...+. ..++.++++|.++.+|.+.. +++...
T Consensus 94 ~~~~~d~vid~~g~~~~~~-~a~~~l~~~G~iv~~G~~~~~~~~~~~~ 140 (170)
T d1jvba2 94 ESKGVDAVIDLNNSEKTLS-VYPKALAKQGKYVMVGLFGADLHYHAPL 140 (170)
T ss_dssp TTSCEEEEEESCCCHHHHT-TGGGGEEEEEEEEECCSSCCCCCCCHHH
T ss_pred hcccchhhhcccccchHHH-hhhhhcccCCEEEEeccccCccccCHHH
Confidence 13799999999887666 44899999999999998744 444443
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.34 E-value=8.7e-07 Score=92.12 Aligned_cols=166 Identities=8% Similarity=0.005 Sum_probs=100.2
Q ss_pred eEEEEEecCCc--eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC-
Q psy15208 5 TKFFNINGSVG--ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRGVGASSG- 81 (1027)
Q Consensus 5 ~~~i~I~t~dG--~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g- 81 (1027)
.+.+.+.+++| ++.++++.|.+....++.|+|+++||.++.... .+ .+ ..+.....++.|+.+++++...-..
T Consensus 13 ~~~~~~~s~dg~~~~~~~v~~P~~~~~~~~yPvi~~lhG~~~~~~~-~~-~~--~~~~~~~~~~~vV~v~~~~~~~~~~~ 88 (265)
T d2gzsa1 13 FSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDRL-DD-EL--LKQLSEKTPPVIVAVGYQTNLPFDLN 88 (265)
T ss_dssp EEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHHC-CH-HH--HHHHTTSCCCEEEEEEESSSSSCCHH
T ss_pred eEEEEEEcCCCCEEEEEEEEcCCCCCCCCCceEEEEecCcchhhhH-HH-HH--HHHHHhcCCCeEEEecCCCCCcCccc
Confidence 45678888887 577888899875445678999999995321111 11 11 2233445789999998876543110
Q ss_pred --------------------CCCCc----cch-HHHHHHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHHhcCCcCCc
Q psy15208 82 --------------------TYDSG----NGE-TDDMEILLRYIQKKYPYL--PIILAGFSFGTFVQAKLQKRLDKEISI 134 (1027)
Q Consensus 82 --------------------~~~~~----~~~-~~Dv~avl~~L~~~~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V 134 (1027)
..... ... ......++.++...+..+ +..+.||||||..++.++.+. + .+
T Consensus 89 ~r~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~~-~--~f 165 (265)
T d2gzsa1 89 SRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLSS-S--YF 165 (265)
T ss_dssp HHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHHC-S--SC
T ss_pred ccccccccccCcccccccccchhccccchHHHHHHHHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHHHHHcC-c--cc
Confidence 00000 001 112234555555555443 489999999999999877664 4 46
Q ss_pred cEEEEEccCCCcC------------CCCCCCCcEEEEEeCC--------CCCCChHHHHhhhC
Q psy15208 135 KILILISVAVKKW------------LIPEVPKNTIIIHGEL--------DEIIPLKDVFLWAN 177 (1027)
Q Consensus 135 ~gLVli~p~~~~~------------~l~~i~~PvLiIhG~~--------D~iVP~~~~~~l~~ 177 (1027)
.+++..+|..... .......|+++.+|+. |..+++.....+.+
T Consensus 166 ~~~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~~~~~~~~l~~ 228 (265)
T d2gzsa1 166 RSYYSASPSLGRGYDALLSRVTAVEPLQFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLT 228 (265)
T ss_dssp SEEEEESGGGSTTHHHHHHHHHTSCTTTTTTCEEEEEECCC-----------CHHHHHHHHHH
T ss_pred CEEEEECCcccccchhhhhccccccccccCCCcEEEEcCCcccccccccccchhHHHHHHHHH
Confidence 7888887754211 2344567889889977 55566666665554
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.29 E-value=5.2e-06 Score=87.71 Aligned_cols=129 Identities=9% Similarity=-0.086 Sum_probs=82.9
Q ss_pred ceEEEEEecCCc--eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHH---HHHHHHHhCCcEEEEEcCCCCCC
Q psy15208 4 NTKFFNINGSVG--ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQ---TLVRVMLSLGYISIRMNFRGVGA 78 (1027)
Q Consensus 4 ~~~~i~I~t~dG--~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~---~la~~La~~Gy~Vla~DlrGhG~ 78 (1027)
+.+++++.++.- ++.+.+ +. ++.|+|.|+||.+ +..+...|. .+.+.+.+.|+.|+.+|-...+.
T Consensus 5 ~v~~~~~~s~~~~r~i~~~~--~~-----~~~p~lyllhG~~---g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~~ 74 (280)
T d1dqza_ 5 PVEYLQVPSASMGRDIKVQF--QG-----GGPHAVYLLDGLR---AQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSF 74 (280)
T ss_dssp CEEEEEEEETTTTEEEEEEE--EC-----CSSSEEEECCCTT---CCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCT
T ss_pred EEEEEEEecccCCCcceEEe--eC-----CCCCEEEECCCCC---CCCccchhhhcchHHHHHHhCCcEEEEECCCCCCc
Confidence 345667766554 455554 22 2468999999963 221111233 35677888999999999533222
Q ss_pred CC-CC------CCC-ccc-hHHHHHHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 79 SS-GT------YDS-GNG-ETDDMEILLRYIQKKYPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 79 S~-g~------~~~-~~~-~~~Dv~avl~~L~~~~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
.. .. ... ... ...-+.+++.++.++++.+ ++++.|+||||..|+.+|.++|+ ++++++.+++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd--~F~av~s~SG~~ 149 (280)
T d1dqza_ 75 YTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQ--QFPYAASLSGFL 149 (280)
T ss_dssp TSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTT--TCSEEEEESCCC
T ss_pred CccccCCcccccCCcchhHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcC--ceeEEEEecCcc
Confidence 11 10 000 111 1222456777777765533 58999999999999999999999 799999999865
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.23 E-value=3.7e-07 Score=97.42 Aligned_cols=108 Identities=10% Similarity=-0.025 Sum_probs=71.1
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHHhC--CcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCCcEEE
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLSL--GYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQKKY-PYLPIIL 111 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La~~--Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~~~-~~~pviL 111 (1027)
+|||+||++...+++. .+..+.+.+.+. |+.|+++++.....+.....-+....+.++.+.+.+.... ...++.+
T Consensus 7 PVVLvHGlg~s~~~~~--~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~~~~~~~~~~~e~v~~~I~~~~~~~~~v~l 84 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPL--SMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQGYNA 84 (279)
T ss_dssp CEEEECCTTCCSCCTT--TTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGTTCEEE
T ss_pred cEEEECCCCCCCCChH--HHHHHHHHHHHHCCCeEEEEEEcCCCcccccccchhhhHHHHHHHHHHHHHhccccccceeE
Confidence 4689999864433332 356677777665 8999999986433221110001123444555666655421 2347999
Q ss_pred EEechhHHHHHHHHHhcCCcCCccEEEEEccCCC
Q psy15208 112 AGFSFGTFVQAKLQKRLDKEISIKILILISVAVK 145 (1027)
Q Consensus 112 VGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~ 145 (1027)
|||||||.++-.++.+++. .+|..+|.++++-.
T Consensus 85 VGhSqGGLiaR~~i~~~~~-~~V~~lITLgsPH~ 117 (279)
T d1ei9a_ 85 MGFSQGGQFLRAVAQRCPS-PPMVNLISVGGQHQ 117 (279)
T ss_dssp EEETTHHHHHHHHHHHCCS-SCEEEEEEESCCTT
T ss_pred EEEccccHHHHHHHHHcCC-CCcceEEEECCCCC
Confidence 9999999999999999886 36999999997653
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=98.23 E-value=7.6e-07 Score=82.07 Aligned_cols=92 Identities=16% Similarity=0.187 Sum_probs=72.4
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH--HhhcCcEEcC---HHHHhccCCEEEecCCCcccCc
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ--AAMEGFLVVT---MEYAKKYGDIFVTCTGNYHVIT 880 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~--A~~~G~~v~~---~~e~l~~aDvvi~atG~~~vi~ 880 (1027)
+.+.||+|+|+|.|.+|..-|+.+...||+|+|++.++..... +...+++... .++.+..+++|+.+|+... ++
T Consensus 8 l~l~~k~vlVvG~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~-~n 86 (113)
T d1pjqa1 8 CQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDDT-VN 86 (113)
T ss_dssp ECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCHH-HH
T ss_pred EEeCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHHhCCCcEEeecCCCHH-HH
Confidence 3589999999999999999999999999999999776654443 2233344321 3445678999999998776 78
Q ss_pred HHHHhcCCCCeEEEEecC
Q psy15208 881 HDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~ 898 (1027)
.+..+.+|..++++|+.-
T Consensus 87 ~~i~~~a~~~~ilVNv~D 104 (113)
T d1pjqa1 87 QRVSDAAESRRIFCNVVD 104 (113)
T ss_dssp HHHHHHHHHTTCEEEETT
T ss_pred HHHHHHHHHcCCEEEeCC
Confidence 787888999999999854
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=98.22 E-value=3e-06 Score=82.90 Aligned_cols=93 Identities=20% Similarity=0.248 Sum_probs=75.6
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHH-HHhhcCcEEcC---HHHHhccCCEEEecCCCc-ccCc
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICAL-QAAMEGFLVVT---MEYAKKYGDIFVTCTGNY-HVIT 880 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~-~A~~~G~~v~~---~~e~l~~aDvvi~atG~~-~vi~ 880 (1027)
.+.+++|+|+|+|.+|+.+++.|+..|+ +|+|+.++..++. .+...|..+.+ +.+.+.++|+||+||+.+ .+++
T Consensus 21 ~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~~l~~~Divi~atss~~~ii~ 100 (159)
T d1gpja2 21 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPHPVIH 100 (159)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSSCCBC
T ss_pred CcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccccchhHHHHhccCCEEEEecCCCCcccc
Confidence 4799999999999999999999999999 7999999877765 36666777654 556677999999999865 5889
Q ss_pred HHHHhcC------CCCeEEEEecCC
Q psy15208 881 HDHMRDM------KDQAIVCNIGHF 899 (1027)
Q Consensus 881 ~~~~~~m------k~gailvNvG~~ 899 (1027)
.++++.. ++..+++..|..
T Consensus 101 ~~~i~~~~~~r~~~~~~~iiDlavP 125 (159)
T d1gpja2 101 VDDVREALRKRDRRSPILIIDIANP 125 (159)
T ss_dssp HHHHHHHHHHCSSCCCEEEEECCSS
T ss_pred HhhhHHHHHhcccCCCeEEEeecCC
Confidence 8887532 244689999876
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=98.21 E-value=6.3e-07 Score=90.74 Aligned_cols=101 Identities=22% Similarity=0.248 Sum_probs=79.1
Q ss_pred HHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcEEc-C-----HHHHh------
Q psy15208 797 IDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFLVV-T-----MEYAK------ 863 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~v~-~-----~~e~l------ 863 (1027)
|.++.++ + .-.|++|+|+|+|+||..+++.++.+|+ +|+++|.++.|+..|...|++.+ + ..+.+
T Consensus 15 ~~a~~~a-~-v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~i~~~t~g 92 (195)
T d1kola2 15 YHGAVTA-G-VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGE 92 (195)
T ss_dssp HHHHHHT-T-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSS
T ss_pred HHHHHHh-C-CCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCCcCHHHHHHHHhCC
Confidence 4555443 4 3689999999999999999999999999 89999999999999999999743 2 11211
Q ss_pred ccCCEEEecCCCc---------------ccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 864 KYGDIFVTCTGNY---------------HVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 864 ~~aDvvi~atG~~---------------~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
..+|++++++|.. ..++ ..++.++++|.++.+|.+.
T Consensus 93 ~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~-~~~~~~r~gG~v~~~G~~~ 143 (195)
T d1kola2 93 PEVDCAVDAVGFEARGHGHEGAKHEAPATVLN-SLMQVTRVAGKIGIPGLYV 143 (195)
T ss_dssp SCEEEEEECCCTTCBCSSTTGGGSBCTTHHHH-HHHHHEEEEEEEEECSCCC
T ss_pred CCcEEEEECccccccCCcccceeecCcHHHHH-HHHHHHhcCCEEEEeeecC
Confidence 1379999999843 2233 4478899999999999864
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=98.20 E-value=8e-07 Score=87.90 Aligned_cols=99 Identities=17% Similarity=0.178 Sum_probs=76.9
Q ss_pred HHHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHh------ccCC
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAK------KYGD 867 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l------~~aD 867 (1027)
.|.++.+. + ..+|++|+|.|. |.+|+.+++.++.+|++|++++.++.+...+...|++ +.+..+.. ..+|
T Consensus 16 A~~al~~~-~-~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D 93 (171)
T d1iz0a2 16 AYLALKRA-Q-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLD 93 (171)
T ss_dssp HHHHHHHT-T-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEE
T ss_pred HHHHHHHh-C-CCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccceeeehhhhhhhhhcccccc
Confidence 35555542 4 469999999995 9999999999999999999999999888889999986 44333222 3489
Q ss_pred EEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 868 IFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 868 vvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+|++++|. .+ .+.++.++++|.++.+|..
T Consensus 94 ~v~d~~G~--~~-~~~~~~l~~~G~~v~~G~~ 122 (171)
T d1iz0a2 94 LVLEVRGK--EV-EESLGLLAHGGRLVYIGAA 122 (171)
T ss_dssp EEEECSCT--TH-HHHHTTEEEEEEEEEC---
T ss_pred ccccccch--hH-HHHHHHHhcCCcEEEEeCC
Confidence 99999883 24 4569999999999999975
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=98.16 E-value=3e-06 Score=83.06 Aligned_cols=91 Identities=19% Similarity=0.254 Sum_probs=76.2
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+++.-+.+ .+..+.||+|+|+|-+. +|+-+|..|...||+|++++..- -++.+.+++||+||
T Consensus 20 Tp~aI~~lL~~-y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t-------------~~l~~~~~~ADivI 85 (166)
T d1b0aa1 20 TPRGIVTLLER-YNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT-------------KNLRHHVENADLLI 85 (166)
T ss_dssp HHHHHHHHHHH-TTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC-------------SCHHHHHHHCSEEE
T ss_pred hHHHHHHHHHH-cCcccccceEEEEeccccccHHHHHHHHHhhcccccccccc-------------chhHHHHhhhhHhh
Confidence 44555554443 57789999999999999 99999999999999999996543 24566778999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.++|.++++..+ .+|+|++++++|..
T Consensus 86 ~a~G~p~~i~~~---~vk~g~vvIDvGi~ 111 (166)
T d1b0aa1 86 VAVGKPGFIPGD---WIKEGAIVIDVGIN 111 (166)
T ss_dssp ECSCCTTCBCTT---TSCTTCEEEECCCE
T ss_pred hhccCccccccc---ccCCCcEEEecCce
Confidence 999999999866 57999999999985
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.16 E-value=4.1e-06 Score=82.62 Aligned_cols=91 Identities=27% Similarity=0.318 Sum_probs=76.7
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEE
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi 870 (1027)
|-.+++.-+.+ .++.+.||+|+|+|-+. +|+-+|..|...||+|++++.+. .++.+...++|++|
T Consensus 22 Tp~aii~lL~~-~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t-------------~~l~~~~~~aDivi 87 (170)
T d1a4ia1 22 TPKGCLELIKE-TGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT-------------AHLDEEVNKGDILV 87 (170)
T ss_dssp HHHHHHHHHHT-TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SSHHHHHTTCSEEE
T ss_pred hHHHHHHHHHH-hCcccccceEEEEecCCccchHHHHHHHhccCceEEEeccc-------------ccHHHHHhhccchh
Confidence 44555555444 58889999999999999 99999999999999999997654 23456778999999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.++|.++++..+ .+|+|++++++|..
T Consensus 88 ~a~G~~~~i~~~---~vk~g~iviDvgi~ 113 (170)
T d1a4ia1 88 VATGQPEMVKGE---WIKPGAIVIDCGIN 113 (170)
T ss_dssp ECCCCTTCBCGG---GSCTTCEEEECCCB
T ss_pred hccccccccccc---cccCCCeEeccCcc
Confidence 999999999866 58999999999985
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.16 E-value=1.5e-06 Score=85.30 Aligned_cols=93 Identities=22% Similarity=0.276 Sum_probs=77.6
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc-hhHHHHhhcCcEEcCHHHHhccCCEEEecCCCc---ccCcHH
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP-ICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNY---HVITHD 882 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp-~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~---~vi~~~ 882 (1027)
.|.+|+|.|+|||.-|++-|+-||..|.+|+|-=+.. .....|..+||++.+++|+.+.+|+|...++.. .+..++
T Consensus 13 ~ik~k~IaViGYGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v~~~~eA~~~aDiim~L~PD~~q~~vy~~~ 92 (182)
T d1np3a2 13 IIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEFQGRLYKEE 92 (182)
T ss_dssp HHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHHHHHHHHHH
T ss_pred HHCCCEEEEEeeCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhccccccHHHHhhhcCeeeeecchHHHHHHHHHh
Confidence 3789999999999999999999999999999864433 345679999999999999999999999877642 445555
Q ss_pred HHhcCCCCeEEEEecCC
Q psy15208 883 HMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~ 899 (1027)
-...||+|..|...-.|
T Consensus 93 I~p~lk~g~~L~FaHGf 109 (182)
T d1np3a2 93 IEPNLKKGATLAFAHGF 109 (182)
T ss_dssp TGGGCCTTCEEEESCCH
T ss_pred hhhhcCCCcEEEEeccc
Confidence 57789999999877555
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=98.14 E-value=1.3e-06 Score=86.08 Aligned_cols=108 Identities=18% Similarity=0.290 Sum_probs=79.1
Q ss_pred hhh-hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH-------
Q psy15208 791 GCR-ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME------- 860 (1027)
Q Consensus 791 g~~-~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~------- 860 (1027)
+|+ -..|.++.+..+ ...|++|+|+|.|.+|..+++.++.+|+ +|+++|.++.|+..|...|++ +++..
T Consensus 10 ~ca~~Tay~a~~~~a~-~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~~~~ 88 (175)
T d1cdoa2 10 GCGVSTGFGAAVNTAK-VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPIS 88 (175)
T ss_dssp GTHHHHHHHHHHTTTC-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHH
T ss_pred hcHHHHHHHHHHHhhC-CCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCCCcchhHH
Confidence 443 234566655444 4689999999999999999999999998 799999999999999999985 44321
Q ss_pred HHh-----ccCCEEEecCCCcccCcHHHHhcCCC-CeEEEEecCCC
Q psy15208 861 YAK-----KYGDIFVTCTGNYHVITHDHMRDMKD-QAIVCNIGHFD 900 (1027)
Q Consensus 861 e~l-----~~aDvvi~atG~~~vi~~~~~~~mk~-gailvNvG~~d 900 (1027)
+.. ...|++++++|+...+... +..+++ +++++-+|..+
T Consensus 89 ~~~~~~~~~G~d~vid~~G~~~~~~~a-~~~~~~g~~~~~~~g~~~ 133 (175)
T d1cdoa2 89 QVLSKMTNGGVDFSLECVGNVGVMRNA-LESCLKGWGVSVLVGWTD 133 (175)
T ss_dssp HHHHHHHTSCBSEEEECSCCHHHHHHH-HHTBCTTTCEEEECSCCS
T ss_pred HHHHhhccCCcceeeeecCCHHHHHHH-HHHhhCCCcceeEEEecC
Confidence 111 1489999999998765543 555444 56666666653
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.10 E-value=3.5e-06 Score=82.23 Aligned_cols=89 Identities=13% Similarity=0.122 Sum_probs=73.7
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCc--EEcCHHHHhccCCEEEecCCCc---ccCcHHHHhc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGF--LVVTMEYAKKYGDIFVTCTGNY---HVITHDHMRD 886 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~--~v~~~~e~l~~aDvvi~atG~~---~vi~~~~~~~ 886 (1027)
+|+|||+|.+|..+|+.++..|-+|+++|+++.+...|...|. ...+..++++++|+||.|+... .++. +....
T Consensus 2 kI~iIG~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilavp~~~~~~vl~-~l~~~ 80 (165)
T d2f1ka2 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTPIQLILPTLE-KLIPH 80 (165)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECSCHHHHHHHHH-HHGGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccCcHhhhhhhhh-hhhhh
Confidence 6899999999999999999999999999999988888888885 3556667889999999988643 3333 44677
Q ss_pred CCCCeEEEEecCCCc
Q psy15208 887 MKDQAIVCNIGHFDN 901 (1027)
Q Consensus 887 mk~gailvNvG~~d~ 901 (1027)
++++.++++++....
T Consensus 81 l~~~~iv~~~~s~~~ 95 (165)
T d2f1ka2 81 LSPTAIVTDVASVKT 95 (165)
T ss_dssp SCTTCEEEECCSCCH
T ss_pred cccccceeeccccch
Confidence 899999999987643
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=98.08 E-value=4.6e-06 Score=81.94 Aligned_cols=107 Identities=16% Similarity=0.195 Sum_probs=81.1
Q ss_pred hhhh-hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCHH------
Q psy15208 790 YGCR-ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTME------ 860 (1027)
Q Consensus 790 ~g~~-~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~~------ 860 (1027)
++|. ...|.++.+..+ .-+|++|+|.|+|.+|...++.++.+|+ +|++++.++.+...+...|++ +++..
T Consensus 9 l~ca~~Tay~al~~~~~-~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~~~~~~~ 87 (176)
T d2fzwa2 9 LGCGISTGYGAAVNTAK-LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPI 87 (176)
T ss_dssp GGTHHHHHHHHHHTTTC-CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCH
T ss_pred hhcHHHHHHHHHHHhhC-CCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCCchhhHH
Confidence 3454 345777665444 4689999999999999999999999997 788899999999999999976 33221
Q ss_pred -HHh-----ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecC
Q psy15208 861 -YAK-----KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 861 -e~l-----~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~ 898 (1027)
+.+ ..+|++++++|+...+. ..+..+++|+.++.++.
T Consensus 88 ~~~~~~~~~~g~D~vid~~G~~~~~~-~~~~~~~~g~~~~~v~~ 130 (176)
T d2fzwa2 88 QEVLIEMTDGGVDYSFECIGNVKVMR-AALEACHKGWGVSVVVG 130 (176)
T ss_dssp HHHHHHHTTSCBSEEEECSCCHHHHH-HHHHTBCTTTCEEEECS
T ss_pred HHHHHHHcCCCCcEeeecCCCHHHHH-HHHHhhcCCceeEEEEe
Confidence 112 24799999999987544 55888888877666544
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=98.07 E-value=4.2e-06 Score=81.64 Aligned_cols=90 Identities=13% Similarity=0.167 Sum_probs=75.7
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCCCcccCcH------HHH
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTGNYHVITH------DHM 884 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG~~~vi~~------~~~ 884 (1027)
+|+|||.|.+|..+|+.|...|-+|+++|+++.+.......|..+ .+..+++.++|+|+.|..+...+.. ..+
T Consensus 2 kIgiIGlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~ 81 (161)
T d1vpda2 2 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII 81 (161)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred EEEEEehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence 699999999999999999999999999999998888888888874 4688899999999999876542222 246
Q ss_pred hcCCCCeEEEEecCCCc
Q psy15208 885 RDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d~ 901 (1027)
..+++|.++++.+....
T Consensus 82 ~~~~~g~iiid~sT~~p 98 (161)
T d1vpda2 82 EGAKPGTVLIDMSSIAP 98 (161)
T ss_dssp HHCCTTCEEEECSCCCH
T ss_pred hccCCCCEEEECCCCCH
Confidence 67899999999988643
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.05 E-value=2.4e-06 Score=84.23 Aligned_cols=101 Identities=17% Similarity=0.121 Sum_probs=78.9
Q ss_pred HHHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc----
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK---- 864 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~---- 864 (1027)
.|.++.+..+ .-+|++|+|.|+ |.||..+.+.++.+|++|++++.++.+...+...|++ +.+ ..+.+.
T Consensus 16 A~~al~~~~~-~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~i~~~t~ 94 (174)
T d1yb5a2 16 AYRALIHSAC-VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVG 94 (174)
T ss_dssp HHHHHHTTSC-CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHC
T ss_pred HHHHHHHHhC-CCCCCEEEEEeccccccccccccccccCcccccccccccccccccccCcccccccccccHHHHhhhhhc
Confidence 4555555434 358999999996 9999999999999999999998888888888899985 432 223221
Q ss_pred --cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 865 --YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 865 --~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
..|++++++|.. .+. ..++.|+++|.++.+|..
T Consensus 95 ~~g~d~v~d~~g~~-~~~-~~~~~l~~~G~iv~~G~~ 129 (174)
T d1yb5a2 95 EKGIDIIIEMLANV-NLS-KDLSLLSHGGRVIVVGSR 129 (174)
T ss_dssp TTCEEEEEESCHHH-HHH-HHHHHEEEEEEEEECCCC
T ss_pred cCCceEEeecccHH-HHH-HHHhccCCCCEEEEEecC
Confidence 379999999865 344 458999999999999865
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.00 E-value=5e-06 Score=90.60 Aligned_cols=110 Identities=14% Similarity=0.138 Sum_probs=74.0
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHH-hCCcEEEEEcCCCCCCCCCCCC----CccchHHHHHHHHHHHHHhC-
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVML-SLGYISIRMNFRGVGASSGTYD----SGNGETDDMEILLRYIQKKY- 104 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La-~~Gy~Vla~DlrGhG~S~g~~~----~~~~~~~Dv~avl~~L~~~~- 104 (1027)
..+|+++++|||... ....++..+...|. ...++|+++|+... +...|. ........+..++++|....
T Consensus 68 ~~~pt~iiiHGw~~~---~~~~~~~~~~~a~l~~~d~NVI~VDW~~~--a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g 142 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDK---GEENWLLDMCKNMFKVEEVNCICVDWKKG--SQTSYTQAANNVRVVGAQVAQMLSMLSANYS 142 (337)
T ss_dssp TTSEEEEEECCCCCT---TCTTHHHHHHHHHTTTCCEEEEEEECHHH--HSSCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCcCC---CCcchHHHHHHHHHhcCCceEEEEeeccc--cCcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 358999999998542 22334555555544 45699999999642 222221 11234556667777766543
Q ss_pred -CCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC
Q psy15208 105 -PYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL 148 (1027)
Q Consensus 105 -~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~ 148 (1027)
+...++|+|||+||.+|-.++.+. . ++..++.++|+.+.|.
T Consensus 143 ~~~~~vhlIGhSLGAhvAG~aG~~~-~--~l~rItgLDPA~P~F~ 184 (337)
T d1rp1a2 143 YSPSQVQLIGHSLGAHVAGEAGSRT-P--GLGRITGLDPVEASFQ 184 (337)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTS-T--TCCEEEEESCCCTTTT
T ss_pred CChhheEEEeecHHHhhhHHHHHhh-c--cccceeccCCCccccC
Confidence 345799999999999998666654 3 5899999999987663
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=97.96 E-value=1.8e-05 Score=77.90 Aligned_cols=107 Identities=15% Similarity=0.195 Sum_probs=80.7
Q ss_pred hhh-hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhcCcE-EcCH-------H
Q psy15208 791 GCR-ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAMEGFL-VVTM-------E 860 (1027)
Q Consensus 791 g~~-~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~~-------~ 860 (1027)
+|. ...|.++.+..+ .-+|++|+|+|+|.+|..+++.++.+|+ +|++++.++.|...+...|++ +++. .
T Consensus 10 ~ca~~Tay~al~~~~~-vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~ 88 (176)
T d2jhfa2 10 GCGFSTGYGSAVKVAK-VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQ 88 (176)
T ss_dssp GTHHHHHHHHHHTTTC-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHH
T ss_pred hcHHHHHHHHHHHhhC-CCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHH
Confidence 454 345667665545 4699999999999999999999999997 899999999999999999986 3321 1
Q ss_pred HHh-----ccCCEEEecCCCcccCcHHHHhcCCCC-eEEEEecCC
Q psy15208 861 YAK-----KYGDIFVTCTGNYHVITHDHMRDMKDQ-AIVCNIGHF 899 (1027)
Q Consensus 861 e~l-----~~aDvvi~atG~~~vi~~~~~~~mk~g-ailvNvG~~ 899 (1027)
+.. ...|++|+++|....+. ..+..++++ ++++..+..
T Consensus 89 ~~~~~~~~~G~D~vid~~G~~~~~~-~a~~~~~~~~g~~~~~~~~ 132 (176)
T d2jhfa2 89 EVLTEMSNGGVDFSFEVIGRLDTMV-TALSCCQEAYGVSVIVGVP 132 (176)
T ss_dssp HHHHHHTTSCBSEEEECSCCHHHHH-HHHHHBCTTTCEEEECSCC
T ss_pred HHHHHHhcCCCCEEEecCCchhHHH-HHHHHHhcCCcceEEecCC
Confidence 111 14799999999987544 447777776 566666654
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.94 E-value=8.9e-06 Score=88.49 Aligned_cols=111 Identities=15% Similarity=0.177 Sum_probs=76.6
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCC----CccchHHHHHHHHHHHHHh--
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLS-LGYISIRMNFRGVGASSGTYD----SGNGETDDMEILLRYIQKK-- 103 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~-~Gy~Vla~DlrGhG~S~g~~~----~~~~~~~Dv~avl~~L~~~-- 103 (1027)
..+|+++++|||... ....++..+...+.+ ..++|+++|+... +...|. ........+..++++|...
T Consensus 68 ~~~pt~iiiHG~~~~---~~~~~~~~~~~a~l~~~d~NVi~VDW~~~--a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g 142 (338)
T d1bu8a2 68 LDRKTRFIVHGFIDK---GEDGWLLDMCKKMFQVEKVNCICVDWRRG--SRTEYTQASYNTRVVGAEIAFLVQVLSTEMG 142 (338)
T ss_dssp TTSEEEEEECCSCCT---TCTTHHHHHHHHHHTTCCEEEEEEECHHH--HSSCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCceEEEeCcccCC---CCcccHHHHHHHHHhcCCceEEEEechhh--cccchHHHHHhHHHHHHHHHHHHHHHHHhcC
Confidence 468999999998542 222345556555544 5699999999643 222221 1123344556677766543
Q ss_pred CCCCcEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCCCcCC
Q psy15208 104 YPYLPIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAVKKWL 148 (1027)
Q Consensus 104 ~~~~pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~~~~~ 148 (1027)
.+.+.++|+|||+|+.+|-.++.+.+. ++..++.++|+.+.|.
T Consensus 143 ~~~~~vhlIGhSLGAhiaG~ag~~l~~--kigrItgLDPA~P~F~ 185 (338)
T d1bu8a2 143 YSPENVHLIGHSLGAHVVGEAGRRLEG--HVGRITGLDPAEPCFQ 185 (338)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTT--CSSEEEEESCBCTTTT
T ss_pred CCcceeEEEeccHHHHHHHHHHHhhcc--ccccccccccCcCccc
Confidence 344579999999999999999998876 7999999999987663
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.89 E-value=1.3e-05 Score=78.99 Aligned_cols=93 Identities=15% Similarity=0.210 Sum_probs=69.5
Q ss_pred CccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH--H----hhcCcE---Ec---CHHHHhccCCEEEe
Q psy15208 805 DVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ--A----AMEGFL---VV---TMEYAKKYGDIFVT 871 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~--A----~~~G~~---v~---~~~e~l~~aDvvi~ 871 (1027)
+..+.||+|+|+|-+. +|+-+|..|...||.|+.++.+-..... + ...+.. .. .+.+....+|++|+
T Consensus 24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIs 103 (171)
T d1edza1 24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT 103 (171)
T ss_dssp TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEE
Confidence 4579999999999998 7999999999999999999876422100 0 000000 01 15566678999999
Q ss_pred cCCCccc-CcHHHHhcCCCCeEEEEecCCC
Q psy15208 872 CTGNYHV-ITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 872 atG~~~v-i~~~~~~~mk~gailvNvG~~d 900 (1027)
++|.++. +..+ ++|+|++++++|...
T Consensus 104 avG~p~~~i~~d---~ik~GavvIDvGi~~ 130 (171)
T d1edza1 104 GVPSENYKFPTE---YIKEGAVCINFACTK 130 (171)
T ss_dssp CCCCTTCCBCTT---TSCTTEEEEECSSSC
T ss_pred ccCCCccccChh---hcccCceEeeccccc
Confidence 9999886 6655 579999999999874
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=97.88 E-value=3.1e-05 Score=77.42 Aligned_cols=104 Identities=19% Similarity=0.108 Sum_probs=75.2
Q ss_pred hhhhHHHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-----cC-----cEEc---
Q psy15208 792 CRESLIDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-----EG-----FLVV--- 857 (1027)
Q Consensus 792 ~~~s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-----~G-----~~v~--- 857 (1027)
++.+.+..+....+.+|.||+|+|+|. |.||+.+|+.+...|++|+++++++.+..+... .. .++.
T Consensus 5 ~~~~~v~~~~~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 84 (191)
T d1luaa1 5 TAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDA 84 (191)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHH
T ss_pred cHHHHHHHHHHHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHH
Confidence 345566667777788999999999995 779999999999999999999999876554222 11 1222
Q ss_pred CHHHHhccCCEEEecCCC-cccCcHHHHhcCCCCeEEEE
Q psy15208 858 TMEYAKKYGDIFVTCTGN-YHVITHDHMRDMKDQAIVCN 895 (1027)
Q Consensus 858 ~~~e~l~~aDvvi~atG~-~~vi~~~~~~~mk~gailvN 895 (1027)
.+++++.++|++|+++|. ...++.+.++.+..--++.+
T Consensus 85 ~~~~~~~~iDilin~Ag~g~~~~~~e~~~~~~~~nv~~~ 123 (191)
T d1luaa1 85 SRAEAVKGAHFVFTAGAIGLELLPQAAWQNESSIEIVAD 123 (191)
T ss_dssp HHHHHTTTCSEEEECCCTTCCCBCHHHHHTCTTCCEEEE
T ss_pred HHHHHhcCcCeeeecCccccccCCHHHHHhhhcceeehh
Confidence 255667789999998873 34567777776665444433
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.86 E-value=0.00027 Score=75.58 Aligned_cols=158 Identities=15% Similarity=0.079 Sum_probs=93.8
Q ss_pred EEEEEecCC--ceEEEEEEecCCcc-----ccCCccEEEEECCCCCCCCCCChHHHH---HHHHHHHhCCcEEEEEcCCC
Q psy15208 6 KFFNINGSV--GILHCAINFPSSIK-----LLKLKGVVLIAHPHPLFGGTMDNKVVQ---TLVRVMLSLGYISIRMNFRG 75 (1027)
Q Consensus 6 ~~i~I~t~d--G~I~~~l~~P~~~~-----~~~~~pvVVllHG~~~~gGs~~~~~~~---~la~~La~~Gy~Vla~DlrG 75 (1027)
.++++.+.. ..+.+.+|.|++.. +.++.|+|.++||++ ++.. .|. .+.+...+.++.++.++...
T Consensus 15 ~~~s~~S~~l~~~~~~~VyLP~~y~~~~~~~~~~yPVLYlLhG~~---~~~~--~w~~~~~~~~~~~~~~~~vv~~~~~p 89 (299)
T d1pv1a_ 15 IKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLT---CTPD--NASEKAFWQFQADKYGFAIVFPDTSP 89 (299)
T ss_dssp EEEEEECSSSSSEEEEEEEECTTTTSCCCSSCTTBCEEEEECCTT---CCHH--HHHHHSCHHHHHHHHTCEEEECCSSC
T ss_pred EEEEEECcccCCceEEEEEeCCcccccCcccCCCCCEEEEcCCCC---CCHH--HHHHhhhHHHHHHHcCCceecCCCcc
Confidence 345566533 26788888897531 224579999999963 3322 232 23455556688899887522
Q ss_pred C--------------CCCCCCCCCc-------cchHHH--HHHHHHHHHHhCCC---------CcEEEEEechhHHHHHH
Q psy15208 76 V--------------GASSGTYDSG-------NGETDD--MEILLRYIQKKYPY---------LPIILAGFSFGTFVQAK 123 (1027)
Q Consensus 76 h--------------G~S~g~~~~~-------~~~~~D--v~avl~~L~~~~~~---------~pviLVGhSmGG~vAl~ 123 (1027)
. |.....+.+. .....| ++++..++...++. ....|.||||||.-|+.
T Consensus 90 ~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~ 169 (299)
T d1pv1a_ 90 RGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAIC 169 (299)
T ss_dssp CSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHH
T ss_pred cccccCCcccccccccCCCccccccccCCcccccchHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHH
Confidence 1 1000111110 001111 23555666665543 25899999999999999
Q ss_pred HHHhc--CCcCCccEEEEEccCCCcC------------------------------CCCCC-CCcEEEEEeCCCCCCChH
Q psy15208 124 LQKRL--DKEISIKILILISVAVKKW------------------------------LIPEV-PKNTIIIHGELDEIIPLK 170 (1027)
Q Consensus 124 ~A~~~--p~~~~V~gLVli~p~~~~~------------------------------~l~~i-~~PvLiIhG~~D~iVP~~ 170 (1027)
+|.++ |+ +..++...++...+. ..... ..++++.+|++|...+..
T Consensus 170 ~al~~~~p~--~f~~~~s~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~G~~D~~~~~~ 247 (299)
T d1pv1a_ 170 GYLKGYSGK--RYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLEEH 247 (299)
T ss_dssp HHHHTGGGT--CCSEEEEESCCCCSTTSHHHHHHHHHHSCC----CGGGCHHHHGGGSCCCTTCCEEEECCTTCTTTTTT
T ss_pred HHHHhcCCC--ceEEEeeccCcCCcccccchhhhhhhhcccchhhhhhcCHHHHHHHhhccCCcceeEecCCCCcchhhh
Confidence 99875 55 678888888753311 02222 346777799999877653
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=97.85 E-value=2.8e-05 Score=80.23 Aligned_cols=95 Identities=21% Similarity=0.306 Sum_probs=75.8
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH-HhhcCcEEcCHHHHhc-cCCEEEecCCCcccCcHH
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ-AAMEGFLVVTMEYAKK-YGDIFVTCTGNYHVITHD 882 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-A~~~G~~v~~~~e~l~-~aDvvi~atG~~~vi~~~ 882 (1027)
+..|.|++|+|-|+|.+|+.+|+.|...||+|+++|.++.+... ....|....+.++.+. .|||++-|. ..++|+.+
T Consensus 34 ~~~l~g~~v~IqG~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~cDIl~PcA-~~~~I~~~ 112 (230)
T d1leha1 34 SDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCA-LGAVLNDF 112 (230)
T ss_dssp SCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECS-CSCCBSTT
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcccCCcccccccccEecccc-cccccChH
Confidence 34689999999999999999999999999999999999866544 3357888888888875 699999876 34579999
Q ss_pred HHhcCCCCeEEEEecCCCccc
Q psy15208 883 HMRDMKDQAIVCNIGHFDNEI 903 (1027)
Q Consensus 883 ~~~~mk~gailvNvG~~d~ei 903 (1027)
....|+-..+ ++..++.+
T Consensus 113 ~~~~l~ak~I---ve~ANn~~ 130 (230)
T d1leha1 113 TIPQLKAKVI---AGSADNQL 130 (230)
T ss_dssp HHHHCCCSEE---CCSCSCCB
T ss_pred HhhccCccEE---EecccCCC
Confidence 9999985533 35554433
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.82 E-value=2.7e-05 Score=75.79 Aligned_cols=93 Identities=11% Similarity=0.100 Sum_probs=76.3
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-cCHHHHhccCCEEEecCCCcccCcH------HH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-VTMEYAKKYGDIFVTCTGNYHVITH------DH 883 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~~~e~l~~aDvvi~atG~~~vi~~------~~ 883 (1027)
++|+|||.|.+|.++|++|...|-+|.++|+++.+...+...|... .++.+++..+|+++.+......+.. ..
T Consensus 2 ~kIg~IGlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~ 81 (162)
T d3cuma2 2 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 81 (162)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred CEEEEEEEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence 5799999999999999999999999999999998888777778764 4688999999999998876542221 13
Q ss_pred HhcCCCCeEEEEecCCCccc
Q psy15208 884 MRDMKDQAIVCNIGHFDNEI 903 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~d~ei 903 (1027)
+..+++|.++++.+..+.+.
T Consensus 82 ~~~l~~g~iiid~st~~p~~ 101 (162)
T d3cuma2 82 LAHIAPGTLVLECSTIAPTS 101 (162)
T ss_dssp HHHSCTTCEEEECSCCCHHH
T ss_pred cccCCCCCEEEECCCCCHHH
Confidence 55688999999998875433
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.79 E-value=1.6e-05 Score=78.19 Aligned_cols=93 Identities=14% Similarity=0.028 Sum_probs=76.5
Q ss_pred CccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhc---------cCCEEEecC
Q psy15208 805 DVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKK---------YGDIFVTCT 873 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~---------~aDvvi~at 873 (1027)
+....|++|+|.|. |.+|..++|.++.+||+|+.+..++.+...+...|.+ +.+.++... ..|+|+++.
T Consensus 19 g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~~~~~~~~~~~~gvd~vid~v 98 (167)
T d1tt7a2 19 GLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPV 98 (167)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESC
T ss_pred cCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceEeccchhchhhhcccCCCceEEEecC
Confidence 44557889999995 9999999999999999999999988888889999987 444443321 369999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|... +. +.++.|+++++++.+|..
T Consensus 99 gg~~-~~-~~~~~l~~~G~iv~~G~~ 122 (167)
T d1tt7a2 99 GGKQ-LA-SLLSKIQYGGSVAVSGLT 122 (167)
T ss_dssp CTHH-HH-HHHTTEEEEEEEEECCCS
T ss_pred cHHH-HH-HHHHHhccCceEEEeecc
Confidence 8775 44 569999999999999976
|
| >d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class II ketol-acid reductoisomerase (KARI) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=97.76 E-value=2.4e-05 Score=79.07 Aligned_cols=91 Identities=20% Similarity=0.182 Sum_probs=73.5
Q ss_pred ccC-CEEEEEcCChhHHHHHHHHHh------CCCEEEEE-cCCchhHHHHhhcCcE-----EcCHHHHhccCCEEEecCC
Q psy15208 808 IAG-KIAVIIGYGDVGKGSAQAMRA------LSAQVWII-EIDPICALQAAMEGFL-----VVTMEYAKKYGDIFVTCTG 874 (1027)
Q Consensus 808 l~G-k~VvViG~G~IG~~vA~~a~~------~Ga~ViV~-d~dp~r~~~A~~~G~~-----v~~~~e~l~~aDvvi~atG 874 (1027)
+.| |+|.|+|||.-|++-|.-||. .|.+|+|- ..+......|..+|++ +.+.+|+++.+|+|...++
T Consensus 41 ~kg~KkIaViGYGsQG~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S~~kA~~dGf~v~~~~v~~v~EAv~~ADiVmiLlP 120 (226)
T d1qmga2 41 FKGIKQIGVIGWGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENGTLGDMWETISGSDLVLLLIS 120 (226)
T ss_dssp TTTCSEEEEECCSSHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCGGGTCEEEHHHHHHTCSEEEECSC
T ss_pred hcCCCEEEEEEeccHHHHHHHhChhhcccccCCceEEEEeCCCChhHHHHHHcCCccCCCcccCHHHHHhhCCEEEEecc
Confidence 578 999999999999999999999 45667664 4444556779999997 7789999999999998876
Q ss_pred Cc---ccCcHHHHhcCCCCeEEEEecCC
Q psy15208 875 NY---HVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 875 ~~---~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.. .+. ++....||+|+.|.....|
T Consensus 121 De~Q~~vy-~~I~p~Lk~G~~L~FaHGF 147 (226)
T d1qmga2 121 DSAQADNY-EKVFSHMKPNSILGLSHGF 147 (226)
T ss_dssp HHHHHHHH-HHHHHHSCTTCEEEESSSH
T ss_pred hHHHHHHH-HHHHHhcCCCceeeecchh
Confidence 43 455 3567889999999877555
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.73 E-value=2.5e-05 Score=77.00 Aligned_cols=101 Identities=11% Similarity=0.081 Sum_probs=78.4
Q ss_pred HHHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHh-----
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAK----- 863 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l----- 863 (1027)
.|.++.+..+ .-+|++|+|.|. |.+|+.+++.++.+|++|+++..++.+...+...|++ +.+ ..+.+
T Consensus 13 A~~al~~~~~-~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~t~ 91 (183)
T d1pqwa_ 13 AWHSLCEVGR-LSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTD 91 (183)
T ss_dssp HHHHHHTTSC-CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTT
T ss_pred HHHHHHHHhC-CCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccccccCCccCHHHHHHHHhC
Confidence 3555555433 357999999885 9999999999999999999988888888888888876 222 22332
Q ss_pred -ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 864 -KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 864 -~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
...|++++++|... +. +.++.|+++|+++++|..
T Consensus 92 ~~g~d~v~d~~g~~~-~~-~~~~~l~~~G~~v~~G~~ 126 (183)
T d1pqwa_ 92 GYGVDVVLNSLAGEA-IQ-RGVQILAPGGRFIELGKK 126 (183)
T ss_dssp TCCEEEEEECCCTHH-HH-HHHHTEEEEEEEEECSCG
T ss_pred CCCEEEEEecccchH-HH-HHHHHhcCCCEEEEEccC
Confidence 24799999999753 44 568999999999999865
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.73 E-value=2e-05 Score=73.87 Aligned_cols=66 Identities=15% Similarity=0.168 Sum_probs=54.0
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcC--------HHHH-hccCCEEEecCCCc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT--------MEYA-KKYGDIFVTCTGNY 876 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~--------~~e~-l~~aDvvi~atG~~ 876 (1027)
|+++|+|||.+|+.+|+.|...|.+|+++|.||.+..++...|..+.- ++++ +.++|.++.+++..
T Consensus 1 k~~iIiG~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~ 75 (134)
T d2hmva1 1 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN 75 (134)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCch
Confidence 678999999999999999999999999999999998888888876431 3333 56788877777643
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.73 E-value=4.8e-05 Score=74.51 Aligned_cols=87 Identities=16% Similarity=0.193 Sum_probs=67.1
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE----------------EcCHHHHhccCCEEEecC
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL----------------VVTMEYAKKYGDIFVTCT 873 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~----------------v~~~~e~l~~aDvvi~at 873 (1027)
.|++.|+|+|.+|..+|..|...|.+|+++|+++.+.......|.. ..++.+++.++|+||.++
T Consensus 1 sk~iaIiGaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v 80 (184)
T d1bg6a2 1 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV 80 (184)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence 3899999999999999999999999999999999877665554421 235789999999999998
Q ss_pred CCccc--CcHHHHhcCCCCeEEEEe
Q psy15208 874 GNYHV--ITHDHMRDMKDQAIVCNI 896 (1027)
Q Consensus 874 G~~~v--i~~~~~~~mk~gailvNv 896 (1027)
..... +-.+.-..++++.+++..
T Consensus 81 ~~~~~~~~~~~i~~~l~~~~~iv~~ 105 (184)
T d1bg6a2 81 PAIHHASIAANIASYISEGQLIILN 105 (184)
T ss_dssp CGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred chhHHHHHHHHhhhccCCCCEEEEe
Confidence 66531 112224567888887755
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.66 E-value=7.3e-05 Score=73.29 Aligned_cols=105 Identities=15% Similarity=0.123 Sum_probs=71.7
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh----c-CcEEcCHHHH-hccCC
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM----E-GFLVVTMEYA-KKYGD 867 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~----~-G~~v~~~~e~-l~~aD 867 (1027)
.|++..+.+. +..+.||+|+|+|+|..+++++..|...|++|.++.+++.++..-.. . .....+.++. ...+|
T Consensus 3 ~Gf~~~l~~~-~~~~~~k~vlIlGaGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~d 81 (170)
T d1nyta1 3 VGLLSDLERL-SFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFD 81 (170)
T ss_dssp HHHHHHHHHH-TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCS
T ss_pred hHHHHHHHHc-CCCCCCCEEEEECCcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccccccccc
Confidence 4677777654 77899999999999999999999999999999999999877654221 1 2234444443 34689
Q ss_pred EEEecCCCc--ccCcHHHHhcCCCCeEEEEecCC
Q psy15208 868 IFVTCTGNY--HVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 868 vvi~atG~~--~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
+||+||..- +-.....++.++++.++..+=..
T Consensus 82 liIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~vY~ 115 (170)
T d1nyta1 82 LIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQ 115 (170)
T ss_dssp EEEECCSCGGGTCCCCCCGGGCCTTCEEEESCCC
T ss_pred eeecccccCcccCCCCCcHHHhccCcEEEEeecC
Confidence 999988432 11111124456666666655443
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.66 E-value=2.4e-05 Score=77.44 Aligned_cols=103 Identities=17% Similarity=0.132 Sum_probs=80.4
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC------HHHHh--
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT------MEYAK-- 863 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~------~~e~l-- 863 (1027)
-..|.++.+..++ -+|++|+|.|. |.+|+.+++.++..||+|+++..++.+...+...|.+ +++ .+..+
T Consensus 15 lTA~~al~~~~~v-~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~ 93 (182)
T d1v3va2 15 LTAYFGLLEVCGV-KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKK 93 (182)
T ss_dssp HHHHHHHHTTTCC-CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHH
Confidence 3456666665553 58999999999 5599999999999999999999888888888888876 221 22222
Q ss_pred ---ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 864 ---KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 864 ---~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
...|+|+++.|... + .+.++.|++++.++.+|..
T Consensus 94 ~~~~Gvd~v~D~vG~~~-~-~~~~~~l~~~G~~v~~G~~ 130 (182)
T d1v3va2 94 ASPDGYDCYFDNVGGEF-L-NTVLSQMKDFGKIAICGAI 130 (182)
T ss_dssp HCTTCEEEEEESSCHHH-H-HHHGGGEEEEEEEEECCCG
T ss_pred hhcCCCceeEEecCchh-h-hhhhhhccCCCeEEeecce
Confidence 24799999998643 3 4569999999999999964
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.64 E-value=3e-05 Score=76.19 Aligned_cols=103 Identities=13% Similarity=0.095 Sum_probs=79.2
Q ss_pred hHHHHHhhhcCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcC-----HHHHhc---
Q psy15208 795 SLIDGIKRATDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVT-----MEYAKK--- 864 (1027)
Q Consensus 795 s~~~~i~r~t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----~~e~l~--- 864 (1027)
..|.++.+..+ ..+|++|+|.|.|. +|..+++.++.+|++|++++.++.+...+...|++ +.+ +.+.+.
T Consensus 15 TA~~al~~~~~-l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~~~~d~~~~v~~~t 93 (179)
T d1qora2 15 TVYYLLRKTYE-IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEIT 93 (179)
T ss_dssp HHHHHHHTTSC-CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHT
T ss_pred HHHHHHHHHhC-CCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEEEECCCCCHHHHHHHHh
Confidence 34556655434 45899999996655 99999999999999999999999998889999976 332 222221
Q ss_pred ---cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 865 ---YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 865 ---~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
..|+|+++.|... + ...+..++++|.++..|...
T Consensus 94 ~g~g~d~v~d~~g~~~-~-~~~~~~l~~~G~~v~~g~~~ 130 (179)
T d1qora2 94 GGKKVRVVYDSVGRDT-W-ERSLDCLQRRGLMVSFGNSS 130 (179)
T ss_dssp TTCCEEEEEECSCGGG-H-HHHHHTEEEEEEEEECCCTT
T ss_pred CCCCeEEEEeCccHHH-H-HHHHHHHhcCCeeeeccccc
Confidence 3699999998653 3 45689999999999998763
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.49 E-value=0.00026 Score=70.76 Aligned_cols=89 Identities=15% Similarity=0.129 Sum_probs=63.7
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-----------cC------------------cE-EcCHH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-----------EG------------------FL-VVTME 860 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-----------~G------------------~~-v~~~~ 860 (1027)
|+|+|+|+|.+|+++|..++..|.+|+++|+++..+..+.. .+ +. ..++.
T Consensus 5 kkvaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~d~~ 84 (192)
T d1f0ya2 5 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 84 (192)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred EEEEEECcCHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhccccchhH
Confidence 79999999999999999999999999999999854332111 11 22 33567
Q ss_pred HHhccCCEEEecCCCcccCcHHHH----hcCCCCeEEEEecCC
Q psy15208 861 YAKKYGDIFVTCTGNYHVITHDHM----RDMKDQAIVCNIGHF 899 (1027)
Q Consensus 861 e~l~~aDvvi~atG~~~vi~~~~~----~~mk~gailvNvG~~ 899 (1027)
+++.++|+|++|....--+..+.| +.++++++++.....
T Consensus 85 ~a~~~ad~ViEav~E~l~~K~~v~~~l~~~~~~~~ilasnTS~ 127 (192)
T d1f0ya2 85 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSS 127 (192)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSS
T ss_pred hhhcccceehhhcccchhHHHHHHHHHhhhcccCceeeccCcc
Confidence 788899999998754311222222 347888988765553
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.48 E-value=6e-05 Score=74.64 Aligned_cols=93 Identities=13% Similarity=0.004 Sum_probs=74.5
Q ss_pred CccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCH----HHHh-----ccCCEEEecC
Q psy15208 805 DVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTM----EYAK-----KYGDIFVTCT 873 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~----~e~l-----~~aDvvi~at 873 (1027)
+....|++|+|.|. |.+|....|.++.+|++|+++-.++.+...+...|.+ +++- ++.. ...|+|+++.
T Consensus 27 g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi~~~~~~~~~~~~~~~~gvD~vid~v 106 (176)
T d1xa0a2 27 GLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPV 106 (176)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECS
T ss_pred CCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccceeeecchhHHHHHHHhhccCcCEEEEcC
Confidence 44578999999995 8899999999999999999998888888888999986 3221 1211 1479999999
Q ss_pred CCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 874 GNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 874 G~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
|... +. +.++.|+++++++.+|..
T Consensus 107 gg~~-~~-~~l~~l~~~Griv~~G~~ 130 (176)
T d1xa0a2 107 GGRT-LA-TVLSRMRYGGAVAVSGLT 130 (176)
T ss_dssp TTTT-HH-HHHHTEEEEEEEEECSCC
T ss_pred Cchh-HH-HHHHHhCCCceEEEeecc
Confidence 8764 44 559999999999999976
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=97.47 E-value=0.00014 Score=70.66 Aligned_cols=92 Identities=15% Similarity=0.207 Sum_probs=70.9
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCchhHHHHhhcCc--EEc-CHHHH-hccCCEEEecCCCcc---cCcH
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDPICALQAAMEGF--LVV-TMEYA-KKYGDIFVTCTGNYH---VITH 881 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~~A~~~G~--~v~-~~~e~-l~~aDvvi~atG~~~---vi~~ 881 (1027)
|+++|+|+|.+|..+|+.++..|. +|+++|+++.....|...|. ... +.++. ...+|+|+.|+.... ++.
T Consensus 2 k~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~p~~~~~~vl~- 80 (171)
T d2g5ca2 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAK- 80 (171)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHHH-
T ss_pred CEEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccCCchhhhhhhh-
Confidence 579999999999999999999885 79999999988888888886 233 33332 347999999987442 332
Q ss_pred HHHhcCCCCeEEEEecCCCccc
Q psy15208 882 DHMRDMKDQAIVCNIGHFDNEI 903 (1027)
Q Consensus 882 ~~~~~mk~gailvNvG~~d~ei 903 (1027)
+....++++.+++.++.....+
T Consensus 81 ~l~~~~~~~~ii~d~~s~k~~~ 102 (171)
T d2g5ca2 81 KLSYILSEDATVTDQGSVKGKL 102 (171)
T ss_dssp HHHHHSCTTCEEEECCSCCTHH
T ss_pred hhhccccccccccccccccHHH
Confidence 3356789999999999875433
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.46 E-value=0.00015 Score=69.65 Aligned_cols=93 Identities=10% Similarity=0.100 Sum_probs=73.8
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHH-HhhcCcEE-cCHHHHhccCCEEEecCCCcccCcHHHHhcCCC
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQ-AAMEGFLV-VTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKD 889 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~-A~~~G~~v-~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~ 889 (1027)
+++++|+|.+|.++++.+...|-+|+++++++.+..+ +...|+.+ .+.++++..+|+|+.|+. +..+ .+.++.+++
T Consensus 2 kIg~IG~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~~dvIilavk-p~~~-~~vl~~l~~ 79 (152)
T d2ahra2 2 KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLF-ETVLKPLHF 79 (152)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGH-HHHHTTSCC
T ss_pred EEEEEeccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeechhhhhhhccceeeeecc-hHhH-HHHhhhccc
Confidence 6899999999999999999999999999999877665 44567764 568899999999999984 3333 456888999
Q ss_pred CeEEEEecCCCcccchhhhh
Q psy15208 890 QAIVCNIGHFDNEIEVEKLK 909 (1027)
Q Consensus 890 gailvNvG~~d~eid~~~l~ 909 (1027)
+..++++... +..+.+.
T Consensus 80 ~~~iis~~ag---i~~~~l~ 96 (152)
T d2ahra2 80 KQPIISMAAG---ISLQRLA 96 (152)
T ss_dssp CSCEEECCTT---CCHHHHH
T ss_pred ceeEeccccc---ccHHHHH
Confidence 9999988654 3444444
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.42 E-value=0.0002 Score=70.78 Aligned_cols=106 Identities=15% Similarity=0.083 Sum_probs=71.4
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHh----hc----Cc--EEc-----
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAA----ME----GF--LVV----- 857 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~----~~----G~--~v~----- 857 (1027)
.|+..++... +..+.||+|+|+|+|..|++++..+...|+ +++++++++.+...+. .. .. .+.
T Consensus 3 ~Gf~~~l~~~-~~~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 81 (182)
T d1vi2a1 3 TGHIRAIKES-GFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQ 81 (182)
T ss_dssp HHHHHHHHHT-TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH
T ss_pred HHHHHHHHHc-CCCcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccc
Confidence 4566666543 778999999999999999999999999999 7999999876544321 11 11 111
Q ss_pred -CHHHHhccCCEEEecCCC--cccCcH---HHHhcCCCCeEEEEecCCC
Q psy15208 858 -TMEYAKKYGDIFVTCTGN--YHVITH---DHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 858 -~~~e~l~~aDvvi~atG~--~~vi~~---~~~~~mk~gailvNvG~~d 900 (1027)
.+.+.+..+|+||+||+. ...... ..+..++++.+++.+-..+
T Consensus 82 ~~~~~~~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p 130 (182)
T d1vi2a1 82 QAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNP 130 (182)
T ss_dssp HHHHHHHHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSS
T ss_pred cchhhhhcccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcCc
Confidence 134556789999999852 111010 1245678888887775443
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.42 E-value=8e-05 Score=65.68 Aligned_cols=69 Identities=17% Similarity=0.088 Sum_probs=50.6
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhH--HHHhhcCcEE--cC-HHHHhccCCEEEecCCCc
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICA--LQAAMEGFLV--VT-MEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~--~~A~~~G~~v--~~-~~e~l~~aDvvi~atG~~ 876 (1027)
.+.||+|+|+|+|..|+++|+.|...|++|+++|..+... .+... +..+ .. -++.+...|+||..+|-+
T Consensus 2 ~~~~K~v~ViGlG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vi~SPGi~ 75 (93)
T d2jfga1 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPE-AVERHTGSLNDEWLMAADLIVASPGIA 75 (93)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCT-TSCEEESBCCHHHHHHCSEEEECTTSC
T ss_pred CcCCCEEEEEeECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhh-ccceeecccchhhhccCCEEEECCCCC
Confidence 3689999999999999999999999999999999855322 22222 2221 11 244567889999888754
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.41 E-value=0.0002 Score=66.88 Aligned_cols=83 Identities=20% Similarity=0.312 Sum_probs=57.9
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-cCcEEcC--------HHHH-hccCCEEEecCCCc--ccC
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-EGFLVVT--------MEYA-KKYGDIFVTCTGNY--HVI 879 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-~G~~v~~--------~~e~-l~~aDvvi~atG~~--~vi 879 (1027)
+|+|+|+|.+|+.+|+.|...|..|+++|.||.+..++.. .+..+.. ++++ +.++|.++.+|++. +++
T Consensus 2 ~IvI~G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~~N~~ 81 (132)
T d1lssa_ 2 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVNLM 81 (132)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcHHHHHH
Confidence 6999999999999999999999999999999987776544 3665431 2222 45789888888764 222
Q ss_pred cHHHHhcCCCCeEEE
Q psy15208 880 THDHMRDMKDQAIVC 894 (1027)
Q Consensus 880 ~~~~~~~mk~gailv 894 (1027)
.....+.+.+.-+++
T Consensus 82 ~~~~~k~~~~~~iI~ 96 (132)
T d1lssa_ 82 SSLLAKSYGINKTIA 96 (132)
T ss_dssp HHHHHHHTTCCCEEE
T ss_pred HHHHHHHcCCceEEE
Confidence 222234454444443
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.41 E-value=0.0002 Score=81.79 Aligned_cols=126 Identities=17% Similarity=0.105 Sum_probs=84.5
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCC----CCCCCCCCCCCccchHH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFR----GVGASSGTYDSGNGETD 91 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~Dlr----GhG~S~g~~~~~~~~~~ 91 (1027)
-|+.=+|.|+........|++|++||++...|+... +. -...++.++.-|+.++|| |+-.+.........-+.
T Consensus 96 CL~LnI~~P~~~~~~~~lPV~v~ihGG~~~~gs~~~--~~-~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~gN~Gl~ 172 (532)
T d2h7ca1 96 CLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAAST--YD-GLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHL 172 (532)
T ss_dssp CCEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTT--SC-CHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHH
T ss_pred CCEEEEEECCCCCCCCCcEEEEEEeCCccccccccc--CC-chhhhhcCceEEEEEeeccCCCccccccccccccccccH
Confidence 466777888653333457999999998776665442 21 123345679999999997 22111111112223588
Q ss_pred HHHHHHHHHHHh---CCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 92 DMEILLRYIQKK---YPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 92 Dv~avl~~L~~~---~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
|...+++|+++. ++.+ +|.|+|||.||..+...+.....+..+.++|+.++..
T Consensus 173 Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~ 230 (532)
T d2h7ca1 173 DQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 230 (532)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence 999999999873 4554 4999999999998877766433334688999988654
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=97.40 E-value=0.00017 Score=71.62 Aligned_cols=100 Identities=17% Similarity=0.168 Sum_probs=70.5
Q ss_pred HHHHhhhcCccccCCEEEEE--cCChhHHHHHHHHHhCCCEEEEEcCCch----hHHHHhhcCcE-EcCHHH--------
Q psy15208 797 IDGIKRATDVMIAGKIAVII--GYGDVGKGSAQAMRALSAQVWIIEIDPI----CALQAAMEGFL-VVTMEY-------- 861 (1027)
Q Consensus 797 ~~~i~r~t~~~l~Gk~VvVi--G~G~IG~~vA~~a~~~Ga~ViV~d~dp~----r~~~A~~~G~~-v~~~~e-------- 861 (1027)
|.++.+..+ ..+|++|+|+ |.|.+|+.+.+.+|.+|++|+++-..+. +...+...|++ +++.++
T Consensus 17 ~~~l~~~~~-~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~ 95 (189)
T d1gu7a2 17 YLMLTHYVK-LTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGP 95 (189)
T ss_dssp HHHHHSSSC-CCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHH
T ss_pred HHHHHHHhC-CCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHH
Confidence 455544433 4689999998 6789999999999999999887633322 23345677875 333211
Q ss_pred Hh--------ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 862 AK--------KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 862 ~l--------~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
.+ ...|+++++.|.+. + ...++.|+++|+++.+|..
T Consensus 96 ~v~~~~~~~g~~vdvv~D~vg~~~-~-~~~~~~l~~~G~~v~~G~~ 139 (189)
T d1gu7a2 96 TIKEWIKQSGGEAKLALNCVGGKS-S-TGIARKLNNNGLMLTYGGM 139 (189)
T ss_dssp HHHHHHHHHTCCEEEEEESSCHHH-H-HHHHHTSCTTCEEEECCCC
T ss_pred HHHHHHhhccCCceEEEECCCcch-h-hhhhhhhcCCcEEEEECCc
Confidence 11 23799999998664 3 4568999999999999964
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.40 E-value=0.00012 Score=80.98 Aligned_cols=103 Identities=14% Similarity=0.091 Sum_probs=67.7
Q ss_pred ccEEEEECCCCCCCCC-C-ChHHHHH----HHHHHHhCCcEEEEEcCCCCCCCCCCCCCccchHHHHHHHHHHHHH---h
Q psy15208 33 KGVVLIAHPHPLFGGT-M-DNKVVQT----LVRVMLSLGYISIRMNFRGVGASSGTYDSGNGETDDMEILLRYIQK---K 103 (1027)
Q Consensus 33 ~pvVVllHG~~~~gGs-~-~~~~~~~----la~~La~~Gy~Vla~DlrGhG~S~g~~~~~~~~~~Dv~avl~~L~~---~ 103 (1027)
+-+|||+||+..++.. . .-.+|.. +.+.|.+.|+.|+.......+ + ...-++++..++.. .
T Consensus 7 ~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~~-------S---~~~RA~eL~~~I~~~~~d 76 (388)
T d1ku0a_ 7 DAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLS-------S---NWDRACEAYAQLVGGTVD 76 (388)
T ss_dssp CCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSSB-------C---HHHHHHHHHHHHHCEEEE
T ss_pred CCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCcc-------C---HHHHHHHHHHHHhhhhhh
Confidence 4456999998543221 1 1124544 788899999999999986322 2 23334455555542 1
Q ss_pred C-------------------------CCCcEEEEEechhHHHHHHHHHhcCC-----------------------cCCcc
Q psy15208 104 Y-------------------------PYLPIILAGFSFGTFVQAKLQKRLDK-----------------------EISIK 135 (1027)
Q Consensus 104 ~-------------------------~~~pviLVGhSmGG~vAl~~A~~~p~-----------------------~~~V~ 135 (1027)
+ +..||.||||||||..+-.++...|+ ...|+
T Consensus 77 ~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~ 156 (388)
T d1ku0a_ 77 YGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFVL 156 (388)
T ss_dssp CCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEE
T ss_pred hhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcceE
Confidence 1 22489999999999999888875542 11489
Q ss_pred EEEEEccCCC
Q psy15208 136 ILILISVAVK 145 (1027)
Q Consensus 136 gLVli~p~~~ 145 (1027)
.+..++.+-.
T Consensus 157 SvTTIsTPH~ 166 (388)
T d1ku0a_ 157 SVTTIATPHD 166 (388)
T ss_dssp EEEEESCCTT
T ss_pred EEEeccCCCC
Confidence 9999997754
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.39 E-value=0.00012 Score=70.34 Aligned_cols=88 Identities=13% Similarity=0.050 Sum_probs=63.0
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCCCcccCcHHHHhcCCCC
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQ 890 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~g 890 (1027)
+|+|||+|.+|+.+|+.++..|-+|++++.++.+.......++. ..+.++++..+|+|+.|+........-....-..+
T Consensus 2 kIgiIG~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~diIi~~v~~~~~~~~~~~~~~~~~ 81 (152)
T d1i36a2 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTPGVALGAARRAGRHVR 81 (152)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCEECCHHHHHTSSEEEECSCGGGHHHHHHHHHTTCC
T ss_pred EEEEEcHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcccccccHHHHHhhcCeEEEEecCchHHHHHHhhcccCC
Confidence 68999999999999999999999999998887665544444443 44678899999999999876543322111112235
Q ss_pred eEEEEecCC
Q psy15208 891 AIVCNIGHF 899 (1027)
Q Consensus 891 ailvNvG~~ 899 (1027)
..+++++..
T Consensus 82 ~~~id~st~ 90 (152)
T d1i36a2 82 GIYVDINNI 90 (152)
T ss_dssp SEEEECSCC
T ss_pred ceeeccCcC
Confidence 567766554
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.36 E-value=0.00013 Score=72.25 Aligned_cols=94 Identities=16% Similarity=0.074 Sum_probs=73.8
Q ss_pred CccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHH-----h--ccCCEEEecCCC
Q psy15208 805 DVMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYA-----K--KYGDIFVTCTGN 875 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~-----l--~~aDvvi~atG~ 875 (1027)
+....+++|+|.|. |.+|....|.+|.+|++|+++..++.+...+...|++ +.+.++. + ...|.++++.|.
T Consensus 27 g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~vi~~~~~~~~~~l~~~~~~~vvD~Vgg 106 (177)
T d1o89a2 27 GVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGD 106 (177)
T ss_dssp TCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEEEEGGGSSSCCSSCCCCEEEEEESSCH
T ss_pred CCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhccccccccccHHHHHHHHhhcCCeeEEEcch
Confidence 44456668888776 8899999999999999999999999888888999997 4433222 1 125899999987
Q ss_pred cccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 876 YHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 876 ~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
.. + ...++.|+++++++++|..+
T Consensus 107 ~~-~-~~~l~~l~~~Griv~~G~~~ 129 (177)
T d1o89a2 107 KV-L-AKVLAQMNYGGCVAACGLAG 129 (177)
T ss_dssp HH-H-HHHHHTEEEEEEEEECCCTT
T ss_pred HH-H-HHHHHHhccccceEeecccC
Confidence 63 3 35699999999999999763
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.31 E-value=8e-05 Score=74.09 Aligned_cols=103 Identities=18% Similarity=0.191 Sum_probs=70.6
Q ss_pred hhHHHHHhhhcCccccC--CEEEEEcC-ChhHHHHHHHHHhCCCE-EEEEcCCchhHH-HHhhcCcE-EcC-----HHHH
Q psy15208 794 ESLIDGIKRATDVMIAG--KIAVIIGY-GDVGKGSAQAMRALSAQ-VWIIEIDPICAL-QAAMEGFL-VVT-----MEYA 862 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~G--k~VvViG~-G~IG~~vA~~a~~~Ga~-ViV~d~dp~r~~-~A~~~G~~-v~~-----~~e~ 862 (1027)
-..|.++.+..++ ..| ++|+|.|+ |.||+.+++.++.+||+ |+++...+.+.. .+...|++ +.+ ..+.
T Consensus 14 lTA~~~l~~~~~~-~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~~~~~~ 92 (187)
T d1vj1a2 14 LTSLIGVQEKGHI-SAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQ 92 (187)
T ss_dssp HHHHHHHHHHSCC-CTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEEETTSSCHHHH
T ss_pred HHHHHHHHHHhCC-CCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEeeccchhHHHH
Confidence 3455666555443 344 89999995 99999999999999995 555555554444 45567876 222 3333
Q ss_pred hc-----cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCC
Q psy15208 863 KK-----YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 863 l~-----~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~ 899 (1027)
++ .+|+|++++|... +. ..++.|+++++++.+|..
T Consensus 93 ~~~~~~~GvDvv~D~vGg~~-~~-~~~~~l~~~G~iv~~G~~ 132 (187)
T d1vj1a2 93 LREACPGGVDVYFDNVGGDI-SN-TVISQMNENSHIILCGQI 132 (187)
T ss_dssp HHHHCTTCEEEEEESSCHHH-HH-HHHTTEEEEEEEEEC---
T ss_pred HHHHhccCceEEEecCCchh-HH-HHhhhccccccEEEeccc
Confidence 33 3899999999653 44 559999999999999863
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=97.23 E-value=0.00054 Score=77.28 Aligned_cols=126 Identities=18% Similarity=0.105 Sum_probs=84.3
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCC----CCCC-CCC-CCCCccch
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFR----GVGA-SSG-TYDSGNGE 89 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~Dlr----GhG~-S~g-~~~~~~~~ 89 (1027)
-|+.=+|.|+.. ....|++|++||++...|+.....+. ....+++.++-|+.++|| |+=. +.. ......--
T Consensus 81 CL~lni~~P~~~--~~~lPV~v~ihGG~~~~g~~~~~~~~-~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~G 157 (483)
T d1qe3a_ 81 CLYVNVFAPDTP--SQNLPVMVWIHGGAFYLGAGSEPLYD-GSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLG 157 (483)
T ss_dssp CCEEEEEEECSS--CCSEEEEEEECCSTTTSCCTTSGGGC-CHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHH
T ss_pred CCEEEEEECCCC--CCCCceEEEEeecccccCCccccccc-cccccccCceEEEeecccccchhhccccccccccccccc
Confidence 577778888752 34689999999987666664432221 223344457999999998 2211 110 00122335
Q ss_pred HHHHHHHHHHHHHh---CCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 90 TDDMEILLRYIQKK---YPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 90 ~~Dv~avl~~L~~~---~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
+.|...+++|+++. ++.+ +|.|+|||.||..+...+.....+..+.++|+.++..
T Consensus 158 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 217 (483)
T d1qe3a_ 158 LLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 217 (483)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCc
Confidence 89999999999874 4544 4999999999999887776533334689999998754
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.23 E-value=0.0003 Score=67.09 Aligned_cols=84 Identities=15% Similarity=0.178 Sum_probs=66.4
Q ss_pred ccCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCcc--cCcHHHH
Q psy15208 808 IAGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYH--VITHDHM 884 (1027)
Q Consensus 808 l~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~--vi~~~~~ 884 (1027)
..=++|+||| .|.+|+.+|+.|+..|-+|.++|+++.... ++.+..+|+++.++.... .+-.+..
T Consensus 7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~------------~~~~~~~~~v~~~~~~~~~~~v~~~~~ 74 (152)
T d2pv7a2 7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA------------ESILANADVVIVSVPINLTLETIERLK 74 (152)
T ss_dssp TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH------------HHHHTTCSEEEECSCGGGHHHHHHHHG
T ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc------------chhhhhccccccccchhhheeeeeccc
Confidence 3457999999 899999999999999999999999875433 445678999998886442 2233457
Q ss_pred hcCCCCeEEEEecCCCccc
Q psy15208 885 RDMKDQAIVCNIGHFDNEI 903 (1027)
Q Consensus 885 ~~mk~gailvNvG~~d~ei 903 (1027)
..+++++++++++....++
T Consensus 75 ~~~~~~~iiiD~~Svk~~~ 93 (152)
T d2pv7a2 75 PYLTENMLLADLTSVKREP 93 (152)
T ss_dssp GGCCTTSEEEECCSCCHHH
T ss_pred ccccCCceEEEecccCHHH
Confidence 7889999999999876554
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.16 E-value=0.00057 Score=78.21 Aligned_cols=127 Identities=19% Similarity=0.149 Sum_probs=83.1
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCC----CCCCCCCCC-CCccchH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFR----GVGASSGTY-DSGNGET 90 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~Dlr----GhG~S~g~~-~~~~~~~ 90 (1027)
-|+.=+|.|.... ....|++|++||++...|+.....+... ...+..+.-|+.++|| |+=.+.... .....-+
T Consensus 96 CL~LnI~~P~~~~-~~~lPV~v~ihGG~~~~gs~~~~~~~~~-~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl 173 (542)
T d2ha2a1 96 CLYLNVWTPYPRP-ASPTPVLIWIYGGGFYSGAASLDVYDGR-FLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGL 173 (542)
T ss_dssp CCEEEEEEESSCC-SSCEEEEEEECCSTTTCCCTTSGGGCTH-HHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHHH
T ss_pred CCEEEEEecCCCC-CCCCcEEEEEEECccccccCcccccCch-hhhhhccceeEeeeeeccceeeecccccccCCCcCCc
Confidence 4666677786421 2467999999998766555443233221 1223468999999998 332111110 1222358
Q ss_pred HHHHHHHHHHHHh---CCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 91 DDMEILLRYIQKK---YPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 91 ~Dv~avl~~L~~~---~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
.|...+++|+++. ++.+ +|.|+|||.||..+..+......+..+.++|+.++..
T Consensus 174 ~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 174 LDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (542)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred ccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeecccc
Confidence 8999999999973 4544 4999999999999887766543233688889888654
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=97.15 E-value=0.00034 Score=69.50 Aligned_cols=89 Identities=16% Similarity=0.132 Sum_probs=62.0
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-----------cC-------------cEEcCHHHHhccC
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-----------EG-------------FLVVTMEYAKKYG 866 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-----------~G-------------~~v~~~~e~l~~a 866 (1027)
|+|+|+|.|.+|+++|..+...|.+|+++|+++.....+.. .+ +...+..+++..+
T Consensus 5 ~~vaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a 84 (186)
T d1wdka3 5 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNV 84 (186)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTTGGGC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeeccccccccccc
Confidence 67999999999999999999999999999999865433211 11 1122223446789
Q ss_pred CEEEecCCCcccCcHHH----HhcCCCCeEEEEecCC
Q psy15208 867 DIFVTCTGNYHVITHDH----MRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 867 Dvvi~atG~~~vi~~~~----~~~mk~gailvNvG~~ 899 (1027)
|+|++|....--+..+. -+.++++++++.....
T Consensus 85 dlViEav~E~l~~K~~lf~~l~~~~~~~~IiaSnTS~ 121 (186)
T d1wdka3 85 DLVVEAVVENPKVKQAVLAEVENHVREDAILASNTST 121 (186)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS
T ss_pred ceeeeeecchHHHHHHHHHHHHhhcCCCeeEEecccc
Confidence 99999876542222222 3457889999877664
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.14 E-value=0.00032 Score=68.88 Aligned_cols=93 Identities=10% Similarity=-0.036 Sum_probs=69.8
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE---------EcCHHHHhccCCEEEecCCCccc--
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL---------VVTMEYAKKYGDIFVTCTGNYHV-- 878 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~---------v~~~~e~l~~aDvvi~atG~~~v-- 878 (1027)
-++|+|||.|.+|..+|++|...|-+|+++|+++.+.......+.. ..++.+.+..+|+++.+......
T Consensus 2 ~~nIg~IGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~ 81 (176)
T d2pgda2 2 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD 81 (176)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred CCcEEEEeEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence 3679999999999999999999999999999999887765554431 12345566778988876644321
Q ss_pred -CcHHHHhcCCCCeEEEEecCCCcc
Q psy15208 879 -ITHDHMRDMKDQAIVCNIGHFDNE 902 (1027)
Q Consensus 879 -i~~~~~~~mk~gailvNvG~~d~e 902 (1027)
+....+..+++|.++++.+..+.+
T Consensus 82 ~v~~~l~~~~~~g~iiid~sT~~~~ 106 (176)
T d2pgda2 82 NFIEKLVPLLDIGDIIIDGGNSEYR 106 (176)
T ss_dssp HHHHHHHHHCCTTCEEEECSCCCHH
T ss_pred HHHHHHHhccccCcEEEecCcchhH
Confidence 223457789999999999886543
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=97.02 E-value=0.00061 Score=70.66 Aligned_cols=68 Identities=22% Similarity=0.185 Sum_probs=51.1
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE-----cCHH---HH-------hccCCEEE
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV-----VTME---YA-------KKYGDIFV 870 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v-----~~~~---e~-------l~~aDvvi 870 (1027)
.|.||+|+|.|.+. ||+.+|+.+...|++|+++++++.....+...+... .+.+ ++ +...|++|
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV 81 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV 81 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence 48999999999776 999999999999999999999987665555545442 2211 12 22479999
Q ss_pred ecCC
Q psy15208 871 TCTG 874 (1027)
Q Consensus 871 ~atG 874 (1027)
.+.|
T Consensus 82 nnAG 85 (248)
T d2d1ya1 82 NNAA 85 (248)
T ss_dssp ECCC
T ss_pred EeCc
Confidence 8766
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=97.01 E-value=0.00068 Score=77.41 Aligned_cols=126 Identities=17% Similarity=0.097 Sum_probs=82.6
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCC----CCCCCCC-CCCccchH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRG----VGASSGT-YDSGNGET 90 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrG----hG~S~g~-~~~~~~~~ 90 (1027)
-++.=+|.|+.. ....|++||+||++...|+.....+. ....++..+.-|+.++||- +-..... ..+...-+
T Consensus 91 CL~LnI~~P~~~--~~~lPV~v~ihGG~~~~g~~~~~~~~-~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~~~gN~Gl 167 (532)
T d1ea5a_ 91 CLYLNIWVPSPR--PKSTTVMVWIYGGGFYSGSSTLDVYN-GKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGL 167 (532)
T ss_dssp CCEEEEEECSSC--CSSEEEEEEECCSTTTCCCTTCGGGC-THHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHH
T ss_pred CCEEEEEeCCCC--CCCCcEEEEEEcCCcccccCCccccC-cchhhcccCccEEEEeeccccccccccccccCCCCcccc
Confidence 566677888752 24689999999987655544332222 2223446689999999972 2211111 01222358
Q ss_pred HHHHHHHHHHHHh---CCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 91 DDMEILLRYIQKK---YPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 91 ~Dv~avl~~L~~~---~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
.|...+++|+++. ++.+ +|.|+|||.||..+.........+..+.++|+.++..
T Consensus 168 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~ 226 (532)
T d1ea5a_ 168 LDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 226 (532)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred hhHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeecccc
Confidence 8999999999974 4544 4999999999998777665432233688888888654
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.99 E-value=0.00015 Score=69.34 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=33.6
Q ss_pred ccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCC
Q psy15208 806 VMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEID 842 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~d 842 (1027)
..+.||+|+|+|.|.+|..-|+.+...||+|+|+..+
T Consensus 9 ~~l~gkrvLViGgG~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 9 HQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp ECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred eeeCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3589999999999999999999999999999999443
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=96.97 E-value=0.00061 Score=65.14 Aligned_cols=85 Identities=9% Similarity=0.130 Sum_probs=63.1
Q ss_pred EEEEEcCChhHHHHHHHHHhCC-CEEEEEcCCchhHHH-HhhcCcEEcCHHHHhccCCEEEecCCCcccCcHHHHhcCCC
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALS-AQVWIIEIDPICALQ-AAMEGFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKD 889 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~G-a~ViV~d~dp~r~~~-A~~~G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~ 889 (1027)
++++||+|.+|.++++.+...| -+|.++|+++.+... +...|+.+.+-.+++.++|+||.|+.... +. +.++.+++
T Consensus 2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~v~~~Div~lavkP~~-~~-~v~~~l~~ 79 (152)
T d1yqga2 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELHSDDVLILAVKPQD-ME-AACKNIRT 79 (152)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCCTTSEEEECSCHHH-HH-HHHTTCCC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccccccccccccceEEEecCHHH-HH-HhHHHHhh
Confidence 6899999999999999877667 689999999987665 44568887776677888999999985332 22 34555543
Q ss_pred -CeEEEEecC
Q psy15208 890 -QAIVCNIGH 898 (1027)
Q Consensus 890 -gailvNvG~ 898 (1027)
+.+++.+..
T Consensus 80 ~~~~viS~~a 89 (152)
T d1yqga2 80 NGALVLSVAA 89 (152)
T ss_dssp TTCEEEECCT
T ss_pred cccEEeeccc
Confidence 566665533
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.96 E-value=0.002 Score=66.13 Aligned_cols=100 Identities=18% Similarity=0.145 Sum_probs=69.3
Q ss_pred hcCccccCCEEEEEcCChhHHHHHHHHH-hCCCEEEEEc-C----------CchhHHHH--------hhcCcEEcCHHHH
Q psy15208 803 ATDVMIAGKIAVIIGYGDVGKGSAQAMR-ALSAQVWIIE-I----------DPICALQA--------AMEGFLVVTMEYA 862 (1027)
Q Consensus 803 ~t~~~l~Gk~VvViG~G~IG~~vA~~a~-~~Ga~ViV~d-~----------dp~r~~~A--------~~~G~~v~~~~e~ 862 (1027)
..+..+.|++|+|-|+|.+|+.+|+.|. ..|++|+.++ . |....... ...+.+..+.++.
T Consensus 24 ~~~~~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga~vv~vsd~~G~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 103 (234)
T d1b26a1 24 VLGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEEL 103 (234)
T ss_dssp HTTCCTTTCEEEEECCSHHHHHHHHHHHHHHCCEEEEEEETTEEEECTTCCCHHHHHHHHHHSSCSTTCSSCEEECHHHH
T ss_pred HcCCCcCCCEEEEECCCHHHHHHHHHHHHhcCCceEEeecCCCcEEeccccchHHHHHHHHhhcceeccccceeeccccc
Confidence 3466789999999999999999999984 6899987653 2 21111111 1123345666777
Q ss_pred hc-cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchh
Q psy15208 863 KK-YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVE 906 (1027)
Q Consensus 863 l~-~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~ 906 (1027)
+. .+||++-|. ..++|+.+..+.++...++ +..+..+..+
T Consensus 104 ~~~~~DI~~PcA-~~~~I~~~~a~~l~~~~I~---e~AN~p~t~~ 144 (234)
T d1b26a1 104 LELDVDILVPAA-LEGAIHAGNAERIKAKAVV---EGANGPTTPE 144 (234)
T ss_dssp HTSCCSEEEECS-CTTCBCHHHHTTCCCSEEE---CCSSSCBCHH
T ss_pred cccccceeecch-hcccccHHHHHHhhhceEe---ecCCCCCCHH
Confidence 75 799999875 4467999999999876544 5555555544
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.96 E-value=0.00053 Score=65.99 Aligned_cols=90 Identities=10% Similarity=0.046 Sum_probs=63.1
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-cCcEE---------cCHHHHhccCCEEEecCCCccc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-EGFLV---------VTMEYAKKYGDIFVTCTGNYHV 878 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-~G~~v---------~~~~e~l~~aDvvi~atG~~~v 878 (1027)
++|+|+|+|+|.+|+.+|+.|...|.+|+|+|++..++..... .+... ...++.+...|+++.++.....
T Consensus 1 ~~K~IliiGaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~ 80 (182)
T d1e5qa1 1 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFH 80 (182)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGGGH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccchhh
Confidence 5799999999999999999999999999999999988776433 22111 1244556678988887754421
Q ss_pred CcHHHHhcCCCCeEEEEecCC
Q psy15208 879 ITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~~ 899 (1027)
.......++.+..++..+..
T Consensus 81 -~~~~~~~~~~~~~~~~~~~~ 100 (182)
T d1e5qa1 81 -ATVIKSAIRQKKHVVTTSYV 100 (182)
T ss_dssp -HHHHHHHHHHTCEEECSSCC
T ss_pred -hHHHHHHHhhccceeecccC
Confidence 21223445667777766654
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.95 E-value=0.0017 Score=73.88 Aligned_cols=126 Identities=21% Similarity=0.110 Sum_probs=82.4
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCC----CCCCCC-CCCCccchH
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRG----VGASSG-TYDSGNGET 90 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrG----hG~S~g-~~~~~~~~~ 90 (1027)
-++.=+|.|... ....|++|++||++...|+.....+.. ....++.+.-|+.+++|- +=..+. ...+...-+
T Consensus 89 CL~lnI~~P~~~--~~~~PV~v~ihGG~~~~gs~~~~~~~~-~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl 165 (526)
T d1p0ia_ 89 CLYLNVWIPAPK--PKNATVLIWIYGGGFQTGTSSLHVYDG-KFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGL 165 (526)
T ss_dssp CCEEEEEEESSC--CSSEEEEEEECCSTTTSCCTTCGGGCT-HHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHH
T ss_pred CCEEEEEeCCCC--CCCCceEEEEECCCcccccCcccccCc-cccccccceeEEecccccccccccCCCCcccccccccc
Confidence 467777888752 245799999999877766654322222 112234689999999972 111111 111223358
Q ss_pred HHHHHHHHHHHHh---CCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 91 DDMEILLRYIQKK---YPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 91 ~Dv~avl~~L~~~---~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
.|...+++|+++. ++.+ +|.|+|+|.||..+.........+..+.++|+.++..
T Consensus 166 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~ 224 (526)
T d1p0ia_ 166 FDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 224 (526)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred cchhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhcccccc
Confidence 9999999999873 4444 4999999999999866655433333678888887654
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.85 E-value=0.00098 Score=65.33 Aligned_cols=106 Identities=13% Similarity=0.007 Sum_probs=70.2
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh-----c------CcEEcCHHHH
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM-----E------GFLVVTMEYA 862 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~-----~------G~~v~~~~e~ 862 (1027)
.|+...+.+. +..+.||+|+|+|+|..+++++..|...| +|.++.+++.++.+-.. . -+...+++..
T Consensus 3 ~G~~~~l~~~-~~~~~~k~vlIlGaGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~ 80 (177)
T d1nvta1 3 IGARMALEEE-IGRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVD 80 (177)
T ss_dssp HHHHHHHHHH-HCCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCC
T ss_pred HHHHHHHHHh-CCCcCCCEEEEECCcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhc
Confidence 3455555554 33589999999999999999999998877 99999999877654211 0 1233445556
Q ss_pred hccCCEEEecCCCcc--cCc---HHHHhcCCCCeEEEEecCCCc
Q psy15208 863 KKYGDIFVTCTGNYH--VIT---HDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 863 l~~aDvvi~atG~~~--vi~---~~~~~~mk~gailvNvG~~d~ 901 (1027)
+..+|++|+||...- -.. .-.+..++++.++.++-..+.
T Consensus 81 ~~~~dliIn~tp~g~~~~~~~~~~~~~~~~~~~~~v~D~~y~p~ 124 (177)
T d1nvta1 81 LDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPL 124 (177)
T ss_dssp CTTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSS
T ss_pred cchhhhhccCCcccccccccccchhhhhccCcccceeeecCCcH
Confidence 678999999885321 000 011345667777777765543
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=96.80 E-value=0.0014 Score=67.67 Aligned_cols=99 Identities=25% Similarity=0.225 Sum_probs=66.0
Q ss_pred CccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEE-cCCc----------hhH-------------HHHhhcCcEEc-CH
Q psy15208 805 DVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWII-EIDP----------ICA-------------LQAAMEGFLVV-TM 859 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~-d~dp----------~r~-------------~~A~~~G~~v~-~~ 859 (1027)
+..+.|++|+|-|+|.+|..+|+.|...|++|+.+ |.+. ... ......+.+.. +.
T Consensus 26 ~~~l~g~~v~IqGfGnVG~~~a~~L~~~Gakvv~vsD~~g~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (242)
T d1v9la1 26 WGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNP 105 (242)
T ss_dssp HSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSST
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEeecccccccccccccHHHHHHHhhcchhhHHHhhhhccCceEeeCc
Confidence 34689999999999999999999999999998754 4321 111 01222344433 33
Q ss_pred HHHhc-cCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhh
Q psy15208 860 EYAKK-YGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEK 907 (1027)
Q Consensus 860 ~e~l~-~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~ 907 (1027)
++.+. .+||++-|.. .++|+.+..+.|+-..++ +..+..+..+.
T Consensus 106 ~~i~~~~~DIliPcA~-~~~I~~~~a~~i~ak~Iv---egAN~p~t~~a 150 (242)
T d1v9la1 106 DAIFKLDVDIFVPAAI-ENVIRGDNAGLVKARLVV---EGANGPTTPEA 150 (242)
T ss_dssp TGGGGCCCSEEEECSC-SSCBCTTTTTTCCCSEEE---CCSSSCBCHHH
T ss_pred chhccccccEEeecch-hccccHHHHHhcccCEEE---ecCCCCCChhH
Confidence 44553 6999998863 447888888888765443 45555554443
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=96.80 E-value=0.0012 Score=75.65 Aligned_cols=129 Identities=14% Similarity=0.086 Sum_probs=80.8
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHH-HHHH-HhCCcEEEEEcCC----CCCCCCC--CCCCcc
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTL-VRVM-LSLGYISIRMNFR----GVGASSG--TYDSGN 87 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~l-a~~L-a~~Gy~Vla~Dlr----GhG~S~g--~~~~~~ 87 (1027)
-|+.=+|.|++.......|++||+||.+...|+........+ ...| +..+.-|+.++|| |+=.+.. ......
T Consensus 105 CL~LnI~~P~~~~~~~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN 184 (544)
T d1thga_ 105 CLYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTN 184 (544)
T ss_dssp CCEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTT
T ss_pred CCEEEEEECCCCCCCCCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhhcccccc
Confidence 577778888753333567999999997665554322101122 2223 4568999999998 2211110 000112
Q ss_pred chHHHHHHHHHHHHHh---CCCC--cEEEEEechhHHHHHHHHHhcC------CcCCccEEEEEccCC
Q psy15208 88 GETDDMEILLRYIQKK---YPYL--PIILAGFSFGTFVQAKLQKRLD------KEISIKILILISVAV 144 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~---~~~~--pviLVGhSmGG~vAl~~A~~~p------~~~~V~gLVli~p~~ 144 (1027)
.-+.|...+++|+++. ++.+ +|.|+|||.||..+...+.... .+..++++|+.++..
T Consensus 185 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~ 252 (544)
T d1thga_ 185 AGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhcccccccccc
Confidence 3588999999999874 4444 4999999999987666554321 112588999988754
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=96.80 E-value=0.0014 Score=75.02 Aligned_cols=129 Identities=18% Similarity=0.099 Sum_probs=79.8
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHH--HHHHhCCcEEEEEcCCC----CCCCC--CCCCCcc
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLV--RVMLSLGYISIRMNFRG----VGASS--GTYDSGN 87 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la--~~La~~Gy~Vla~DlrG----hG~S~--g~~~~~~ 87 (1027)
-|+.=+|.|+......+.|++|++||++...|+.....-..++ ..++.+++-|+.+++|- +=..+ .......
T Consensus 97 CL~LnI~~P~~~~~~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~~gN 176 (534)
T d1llfa_ 97 CLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGN 176 (534)
T ss_dssp CCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTT
T ss_pred CCEEEEEECCCCCCCCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCCcccccccccc
Confidence 5777788886533345789999999976544443210001222 23556799999999982 11110 0000112
Q ss_pred chHHHHHHHHHHHHHh---CCCC--cEEEEEechhHHHHHHHHH-hc----CC-cCCccEEEEEccCC
Q psy15208 88 GETDDMEILLRYIQKK---YPYL--PIILAGFSFGTFVQAKLQK-RL----DK-EISIKILILISVAV 144 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~---~~~~--pviLVGhSmGG~vAl~~A~-~~----p~-~~~V~gLVli~p~~ 144 (1027)
.-+.|...+++|+++. ++.+ +|.|+|||.||..+..... .. |. +..++++|+.++..
T Consensus 177 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 177 AGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred cchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 3578999999999974 4444 4999999999996654443 21 11 12478889888654
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=96.79 E-value=0.0016 Score=74.03 Aligned_cols=128 Identities=17% Similarity=0.030 Sum_probs=81.0
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHHHHhCCcEEEEEcCCC----CCCCCC--CCCCccch
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRVMLSLGYISIRMNFRG----VGASSG--TYDSGNGE 89 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~La~~Gy~Vla~DlrG----hG~S~g--~~~~~~~~ 89 (1027)
-|+.=+|.|+......+.|++|++||++...|+........... ....+.-|+.++||- +=.+.. .......-
T Consensus 80 CL~LnI~~P~~~~~~~~~PV~v~ihGG~~~~G~~~~~~~~~~~~-~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~G 158 (517)
T d1ukca_ 80 CLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQ-ASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAG 158 (517)
T ss_dssp CCEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHH-HTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHH
T ss_pred CCEEEEEeCCCCCCCCCceEEEEEcCCccccCCCccccchhhhh-hhccccceEEEEecccceeecCccccccccccchh
Confidence 46666788875333345799999999887766654322222221 234578899999983 111100 00112235
Q ss_pred HHHHHHHHHHHHHh---CCCC--cEEEEEechhHHHHHHHHHhc-C-CcCCccEEEEEccCC
Q psy15208 90 TDDMEILLRYIQKK---YPYL--PIILAGFSFGTFVQAKLQKRL-D-KEISIKILILISVAV 144 (1027)
Q Consensus 90 ~~Dv~avl~~L~~~---~~~~--pviLVGhSmGG~vAl~~A~~~-p-~~~~V~gLVli~p~~ 144 (1027)
+.|...+++|+++. ++.+ +|.|+|||.||..+....... + .+..+.++|+.++..
T Consensus 159 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~ 220 (517)
T d1ukca_ 159 LLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 220 (517)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccccceeeeccccc
Confidence 88999999999974 4444 499999999999876554432 2 223689999988754
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=96.79 E-value=0.00048 Score=74.21 Aligned_cols=68 Identities=9% Similarity=0.112 Sum_probs=49.4
Q ss_pred cEEEEEechhHHHHHHHHHhcCCcCCcc-EEEEEccCCCc--------------C--------------------CCCCC
Q psy15208 108 PIILAGFSFGTFVQAKLQKRLDKEISIK-ILILISVAVKK--------------W--------------------LIPEV 152 (1027)
Q Consensus 108 pviLVGhSmGG~vAl~~A~~~p~~~~V~-gLVli~p~~~~--------------~--------------------~l~~i 152 (1027)
++.++|+|+||.+|+.++..+|+ .++ ++..+++.+.. . .....
T Consensus 12 rI~V~G~SsGG~mA~~la~a~sd--~f~aga~vvAg~p~~ca~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 89 (318)
T d2d81a1 12 SVSVSGLASGGYMAAQLGVAYSD--VFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWSGNQIASVANLG 89 (318)
T ss_dssp EEEEEEETHHHHHHHHHHHHTTT--TSCSEEEEESCCCTTTTSSSCGGGGSTTCCCCCHHHHHHHHHHBTTTBCCGGGGG
T ss_pred ceEEEEECHHHHHHHHHHHhccc--ceeeeEEEeccCchhhhcccchHHHhhcCCCCCcChhHHHHHHhhcCCcchhccC
Confidence 59999999999999999999998 564 44344332100 0 01123
Q ss_pred CCcEEEEEeCCCCCCChHHHHhhhC
Q psy15208 153 PKNTIIIHGELDEIIPLKDVFLWAN 177 (1027)
Q Consensus 153 ~~PvLiIhG~~D~iVP~~~~~~l~~ 177 (1027)
..|++++||++|..||+..+..+.+
T Consensus 90 ~~pvll~hG~~D~~Vpp~~s~~l~~ 114 (318)
T d2d81a1 90 QRKIYMWTGSSDTTVGPNVMNQLKA 114 (318)
T ss_dssp GCEEEEEEETTCCSSCHHHHHHHHH
T ss_pred CCCEEEEecCCCCCcCHHHHHHHHH
Confidence 4799999999999999998876554
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=96.77 E-value=0.0019 Score=69.91 Aligned_cols=99 Identities=20% Similarity=0.290 Sum_probs=75.7
Q ss_pred cCCEEEEEcCChhHHHHHHHHH-hCCC-EEEEEcCCchhHHHH-----hhcCcEE---cCHHHHhccCCEEEecCCCc--
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMR-ALSA-QVWIIEIDPICALQA-----AMEGFLV---VTMEYAKKYGDIFVTCTGNY-- 876 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~-~~Ga-~ViV~d~dp~r~~~A-----~~~G~~v---~~~~e~l~~aDvvi~atG~~-- 876 (1027)
.-++++|||+|..++..++.+. -++. +|.|++++|.+.... ...|+.+ .++++++..||||++||.++
T Consensus 127 da~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~eav~~ADIi~t~Tas~s~ 206 (340)
T d1x7da_ 127 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAY 206 (340)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSSE
T ss_pred CCceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCCHHHHHhcCCceeeccccCCC
Confidence 4589999999999998887664 5776 799999998765432 1236653 36899999999999988543
Q ss_pred -ccCcHHHHhcCCCCeEEEEecCC---Ccccchhhhhc
Q psy15208 877 -HVITHDHMRDMKDQAIVCNIGHF---DNEIEVEKLKK 910 (1027)
Q Consensus 877 -~vi~~~~~~~mk~gailvNvG~~---d~eid~~~l~~ 910 (1027)
.++.. +.+|+|+.+..+|.+ ..|+|.+.+..
T Consensus 207 ~Pv~~~---~~l~pG~hI~aiGs~~p~~~Eld~~~l~~ 241 (340)
T d1x7da_ 207 ATIITP---DMLEPGMHLNAVGGDCPGKTELHADVLRN 241 (340)
T ss_dssp EEEECG---GGCCTTCEEEECSCCBTTBEEECHHHHHT
T ss_pred Ccccch---hhcCCCCEEeecccchhhhhccCHHHHhc
Confidence 57775 468999999999987 35888776653
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.76 E-value=0.0013 Score=64.35 Aligned_cols=81 Identities=14% Similarity=0.173 Sum_probs=58.8
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH-hhc----CcEEcCHHH-HhccCC
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA-AME----GFLVVTMEY-AKKYGD 867 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A-~~~----G~~v~~~~e-~l~~aD 867 (1027)
.|+...+.. .+..+.||+|+|+|+|..+++++..|...+.+|+++.+++.++..- ... .+.....++ .+..+|
T Consensus 3 ~Gf~~~l~~-~~~~~~~k~vlIlGaGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~d 81 (171)
T d1p77a1 3 IGLVTDLQR-LNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYD 81 (171)
T ss_dssp HHHHHHHHH-TTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCS
T ss_pred HHHHHHHHH-cCCCCCCCEEEEECCcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccccccccc
Confidence 456666654 3667899999999999999999999998778999999998765542 221 122222222 346789
Q ss_pred EEEecCCC
Q psy15208 868 IFVTCTGN 875 (1027)
Q Consensus 868 vvi~atG~ 875 (1027)
+||+||+.
T Consensus 82 iiIN~tp~ 89 (171)
T d1p77a1 82 LVINATSA 89 (171)
T ss_dssp EEEECCCC
T ss_pred eeeecccc
Confidence 99999853
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=96.73 E-value=0.0011 Score=68.71 Aligned_cols=44 Identities=25% Similarity=0.354 Sum_probs=38.6
Q ss_pred cCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 804 TDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
|| .|.||+|+|.|.+. ||+.+|+.+...|++|+++++++.++.+
T Consensus 1 tn-rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~ 45 (253)
T d1hxha_ 1 TN-RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQ 45 (253)
T ss_dssp CC-TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CC-CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 34 38999999999877 9999999999999999999999866554
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=96.72 E-value=0.0011 Score=68.90 Aligned_cols=102 Identities=17% Similarity=0.190 Sum_probs=67.7
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEE-EcCC----------chhHHH----------------HhhcCcEE
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWI-IEID----------PICALQ----------------AAMEGFLV 856 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV-~d~d----------p~r~~~----------------A~~~G~~v 856 (1027)
.+..+.|++|+|-|+|.+|+.+|+.|...|++|+. .|.+ ...+.. +...+.+.
T Consensus 30 ~~~~l~g~~v~IQGfGnVG~~~a~~L~e~GakvvavsD~~G~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (255)
T d1bgva1 30 ENDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQF 109 (255)
T ss_dssp TTCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEE
T ss_pred CCCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCceEecCCCCCHHHHHHHHHHHhhhcCcchhhhhhhcCcee
Confidence 35568999999999999999999999999999764 3422 211111 12234455
Q ss_pred cCHHHHhc-cCCEEEecCCCcccCcHHHHhcCCC-CeEEEEecCCCcccchhh
Q psy15208 857 VTMEYAKK-YGDIFVTCTGNYHVITHDHMRDMKD-QAIVCNIGHFDNEIEVEK 907 (1027)
Q Consensus 857 ~~~~e~l~-~aDvvi~atG~~~vi~~~~~~~mk~-gailvNvG~~d~eid~~~ 907 (1027)
.+.++.+. .|||++-|. ..+.|+.+..+.++. ++.+|- +..+..+..+.
T Consensus 110 ~~~~~~~~~~~DiliPcA-~~~~I~~~~a~~l~a~~ck~I~-EgAN~p~t~ea 160 (255)
T d1bgva1 110 FPGEKPWGQKVDIIMPCA-TQNDVDLEQAKKIVANNVKYYI-EVANMPTTNEA 160 (255)
T ss_dssp EETCCGGGSCCSEEECCS-CTTCBCHHHHHHHHHTTCCEEE-CCSSSCBCHHH
T ss_pred echhhcccccccEEeecc-ccccccHHHHHhhhhcCceEEe-cCCCCCcchHH
Confidence 55555553 699999876 445789888888864 454443 44455554443
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=96.61 E-value=0.0048 Score=63.48 Aligned_cols=96 Identities=21% Similarity=0.230 Sum_probs=65.8
Q ss_pred cccCCEEEEEcCChhHHHHHHHHH-hCCCEEEE-EcCC----------chhHHHHh--------hcCcEEcCHHHHhc-c
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMR-ALSAQVWI-IEID----------PICALQAA--------MEGFLVVTMEYAKK-Y 865 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~-~~Ga~ViV-~d~d----------p~r~~~A~--------~~G~~v~~~~e~l~-~ 865 (1027)
.+.|++|+|-|+|.+|..+|+.|. .+|++|+. .|.+ .....+.. ..|.+.++.++.+. .
T Consensus 29 ~l~g~~v~IqGfGnVG~~~a~~L~~~~G~kvv~vsD~~g~i~~~~G~d~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 108 (239)
T d1gtma1 29 TLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNPDGLNADEVLKWKNEHGSVKDFPGATNITNEELLELE 108 (239)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEEEEEEECHHHHHHHHHHHSSSTTCTTSEEECHHHHHHSC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHhcCcceeeccccccceecCCcCCHHHHHHHHHhccccccCCCCeeeccccccccc
Confidence 489999999999999999999885 68998664 4543 11111111 12455667777764 7
Q ss_pred CCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchh
Q psy15208 866 GDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVE 906 (1027)
Q Consensus 866 aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~ 906 (1027)
+||++-|.. .++|+.+..+.++-..++ +..+..+..+
T Consensus 109 ~DIl~PcA~-~~~I~~~~a~~i~ak~I~---e~AN~p~t~e 145 (239)
T d1gtma1 109 VDVLAPAAI-EEVITKKNADNIKAKIVA---EVANGPVTPE 145 (239)
T ss_dssp CSEEEECSC-SCCBCTTGGGGCCCSEEE---CCSSSCBCHH
T ss_pred ccEEeeccc-cccccHHHHHhccccEEE---ecCCCCCCHH
Confidence 999998874 457898888888766443 5555555544
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.60 E-value=0.0032 Score=67.56 Aligned_cols=98 Identities=21% Similarity=0.238 Sum_probs=74.8
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh-CCC-EEEEEcCCchhHHH----HhhcCcE-EcCHHHHhccCCEEEecCCC-cccCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA-LSA-QVWIIEIDPICALQ----AAMEGFL-VVTMEYAKKYGDIFVTCTGN-YHVIT 880 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~-~Ga-~ViV~d~dp~r~~~----A~~~G~~-v~~~~e~l~~aDvvi~atG~-~~vi~ 880 (1027)
.-++++|+|.|..++..++.+.. +.. +|.|+++++.++.. ....++. ..+.++++..+|||++||.+ ..++.
T Consensus 124 ~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~~~a~~~aDiV~taT~s~~P~~~ 203 (320)
T d1omoa_ 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEASRCDVLVTTTPSRKPVVK 203 (320)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHTSSSEEEECCCCSSCCBC
T ss_pred CccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccchhhhhccccEEEEeccCcccccc
Confidence 45799999999999999887776 555 79999999876543 2233443 44677888999999998864 46676
Q ss_pred HHHHhcCCCCeEEEEecCC---Ccccchhhhh
Q psy15208 881 HDHMRDMKDQAIVCNIGHF---DNEIEVEKLK 909 (1027)
Q Consensus 881 ~~~~~~mk~gailvNvG~~---d~eid~~~l~ 909 (1027)
.+ .+|+|+.+..+|.+ ..|+|.+.+.
T Consensus 204 ~~---~l~~G~hv~~iGs~~p~~~Eld~~~~~ 232 (320)
T d1omoa_ 204 AE---WVEEGTHINAIGADGPGKQELDVEILK 232 (320)
T ss_dssp GG---GCCTTCEEEECSCCSTTCCCBCHHHHH
T ss_pred hh---hcCCCCeEeecCCccccccccCHHHhh
Confidence 44 68999999999987 3588877554
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.55 E-value=0.0028 Score=66.86 Aligned_cols=98 Identities=16% Similarity=0.194 Sum_probs=64.1
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEE-cC----------CchhHHHHhhcC-----c--EEcCHHHHhc-cCC
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWII-EI----------DPICALQAAMEG-----F--LVVTMEYAKK-YGD 867 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~-d~----------dp~r~~~A~~~G-----~--~v~~~~e~l~-~aD 867 (1027)
.+.||+|+|-|+|.+|..+|+.|...|++|+.+ |. |...+....... + ...+.++.+. .||
T Consensus 33 ~L~gktvaIqGfGnVG~~~A~~L~e~Gakvv~vsD~~G~i~~~~Gld~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 112 (293)
T d1hwxa1 33 GFGDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCD 112 (293)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEECCTTCCCHHHHHHHHHTTSSSTTCTTSCBCCSCGGGCCCS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEccchhhccccccchHHHHHHHHHcCCeecccccccCCcccccCCcc
Confidence 589999999999999999999999999997765 32 222222211110 0 1122233443 699
Q ss_pred EEEecCCCcccCcHHHHhcCCCCeEEEEecCCCcccchhhh
Q psy15208 868 IFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKL 908 (1027)
Q Consensus 868 vvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l 908 (1027)
|++-|. ..++|+.+..+.++...++ +..+..+..+..
T Consensus 113 IliPaA-~~~~I~~~~a~~l~ak~I~---EgAN~P~t~eA~ 149 (293)
T d1hwxa1 113 ILIPAA-SEKQLTKSNAPRVKAKIIA---EGANGPTTPQAD 149 (293)
T ss_dssp EEEECS-SSSCBCTTTGGGCCCSEEE---CCSSSCBCHHHH
T ss_pred EEeecc-ccccccHHHHHHHhhCEEe---ccCCCCCCcchH
Confidence 999875 4567888888888766443 555555554433
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=96.53 E-value=0.00049 Score=65.54 Aligned_cols=85 Identities=13% Similarity=0.114 Sum_probs=59.4
Q ss_pred EEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc-CcEEcCHHHHhccCCEEEecCCCcccCcHHHHhcCC-CC
Q psy15208 813 AVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME-GFLVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMK-DQ 890 (1027)
Q Consensus 813 VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~-G~~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk-~g 890 (1027)
+++||+|.+|+.+|+.|+..+-.+.|+++++.++...... +....+..+++.++|+|+.|+.... +. +.++.++ ++
T Consensus 2 IgfIG~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~d~~-i~-~v~~~l~~~~ 79 (153)
T d2i76a2 2 LNFVGTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDRY-IK-TVANHLNLGD 79 (153)
T ss_dssp CEEESCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCTTT-HH-HHHTTTCCSS
T ss_pred EEEEeCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEeccchh-hh-HHHhhhcccc
Confidence 5799999999999999977443456899999887664444 4456678888999999999986543 33 4567774 78
Q ss_pred eEEEEecCC
Q psy15208 891 AIVCNIGHF 899 (1027)
Q Consensus 891 ailvNvG~~ 899 (1027)
.++++++..
T Consensus 80 ~ivi~~s~~ 88 (153)
T d2i76a2 80 AVLVHCSGF 88 (153)
T ss_dssp CCEEECCSS
T ss_pred eeeeecccc
Confidence 888888654
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.50 E-value=0.0026 Score=73.44 Aligned_cols=129 Identities=18% Similarity=0.089 Sum_probs=77.7
Q ss_pred eEEEEEEecCCcc-ccCCccEEEEECCCCCCCCCCChHHHHH--H--HHHHHh-CCcEEEEEcCC----CCCCCCCCCCC
Q psy15208 16 ILHCAINFPSSIK-LLKLKGVVLIAHPHPLFGGTMDNKVVQT--L--VRVMLS-LGYISIRMNFR----GVGASSGTYDS 85 (1027)
Q Consensus 16 ~I~~~l~~P~~~~-~~~~~pvVVllHG~~~~gGs~~~~~~~~--l--a~~La~-~Gy~Vla~Dlr----GhG~S~g~~~~ 85 (1027)
-|+.=+|.|.... .....|++||+||++...|+.....+.. + ...|+. .+.-|+.++|| |+-.+......
T Consensus 80 CL~LNI~~P~~~~~~~~~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GFl~~~~~~~~ 159 (579)
T d2bcea_ 80 CLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLP 159 (579)
T ss_dssp CCEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCC
T ss_pred CCEEEEEECCCCCCCCCCCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeecccccccccccccccCCC
Confidence 4666677775421 1235799999999765444432111100 0 123333 36899999997 22111111112
Q ss_pred ccchHHHHHHHHHHHHHh---CCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 86 GNGETDDMEILLRYIQKK---YPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 86 ~~~~~~Dv~avl~~L~~~---~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
..--+.|...+++|+++. ++.+ +|.|+|||.||..+............++++|+.++..
T Consensus 160 gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 160 GNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp CCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred ccchhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCc
Confidence 223588999999999874 4544 4999999999998877665433334689999988654
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.48 E-value=0.0027 Score=61.59 Aligned_cols=65 Identities=18% Similarity=0.263 Sum_probs=50.8
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHH-HhhcCcEEcCHHHHhccCCEEEecCC
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQ-AAMEGFLVVTMEYAKKYGDIFVTCTG 874 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~-A~~~G~~v~~~~e~l~~aDvvi~atG 874 (1027)
.+|+|+|+|+|..+++++..|+..|+ +|.|+.+++.++.. +...+....+- ....++|+||+||+
T Consensus 16 ~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~-~~~~~~DliINaTp 82 (167)
T d1npya1 16 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINS-LENQQADILVNVTS 82 (167)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESC-CTTCCCSEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhc-ccccchhhheeccc
Confidence 78999999999999999999999998 79999999877654 34445543321 12357899999885
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=96.38 E-value=0.0024 Score=65.71 Aligned_cols=41 Identities=27% Similarity=0.328 Sum_probs=37.3
Q ss_pred ccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 808 IAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 808 l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
|.||+++|.|.+. ||+.+|+.+...|++|+++++++.++.+
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~ 43 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQA 43 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 7899999999887 9999999999999999999999866554
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.38 E-value=0.0037 Score=61.15 Aligned_cols=89 Identities=21% Similarity=0.123 Sum_probs=60.0
Q ss_pred CEEEEEcCChhHHHHHHHHHhCC-CE-EEEEcCCchhH-HHHhhcCcEEc-------------------CHHHHhccCCE
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALS-AQ-VWIIEIDPICA-LQAAMEGFLVV-------------------TMEYAKKYGDI 868 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~G-a~-ViV~d~dp~r~-~~A~~~G~~v~-------------------~~~e~l~~aDv 868 (1027)
.+|+|.|||+|||.+++.+.... .+ |.|.|.+|... ..+...++... ++.++..++|+
T Consensus 3 irIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDv 82 (172)
T d2czca2 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI 82 (172)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred EEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCCE
Confidence 47999999999999999998755 45 55678777433 23445554421 13344557999
Q ss_pred EEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 869 FVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 869 vi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
|++|||...-. +..-..++.|+..|-+|..+
T Consensus 83 ViEcTG~f~~~-~~~~~hl~~G~k~Vi~s~~~ 113 (172)
T d2czca2 83 IVDATPGGIGA-KNKPLYEKAGVKAIFQGGEK 113 (172)
T ss_dssp EEECCSTTHHH-HHHHHHHHHTCEEEECTTSC
T ss_pred EEECCCCCCCH-HHHHHHHHcCCCEEEECCCC
Confidence 99999965311 12234467899998888764
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.21 E-value=0.0052 Score=61.26 Aligned_cols=88 Identities=18% Similarity=0.159 Sum_probs=62.0
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH-------------------hhcCc--EEcCHHHHhccCCEEE
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA-------------------AMEGF--LVVTMEYAKKYGDIFV 870 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A-------------------~~~G~--~v~~~~e~l~~aDvvi 870 (1027)
+|+|+|.|.+|..+|..++..|-+|+++|.|+.+...- ...+. ...+..+++..+|+++
T Consensus 2 kI~ViGlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~i~ 81 (202)
T d1mv8a2 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVSF 81 (202)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEEE
T ss_pred EEEEECCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCEEE
Confidence 58999999999999999999999999999998553321 11111 1345788888999999
Q ss_pred ecCCCcc-------------cCcH--HHHhcCCCCeEEEEecCC
Q psy15208 871 TCTGNYH-------------VITH--DHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 871 ~atG~~~-------------vi~~--~~~~~mk~gailvNvG~~ 899 (1027)
.|.+++. ++.. ..+...+++.+++.-...
T Consensus 82 i~VpTP~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~liii~STv 125 (202)
T d1mv8a2 82 ICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTV 125 (202)
T ss_dssp ECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCC
T ss_pred EecCccccccccccchhhhhhhhhhhheeecccCCcceeecccc
Confidence 9887641 1111 123456677777765544
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.21 E-value=0.0033 Score=64.69 Aligned_cols=44 Identities=25% Similarity=0.428 Sum_probs=39.2
Q ss_pred ccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHH
Q psy15208 806 VMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQA 849 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A 849 (1027)
+.|.||+|+|.|.+. ||+++|+.+...|++|+++++++.++.+.
T Consensus 3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~ 47 (244)
T d1pr9a_ 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSL 47 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence 458999999999988 99999999999999999999998665543
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=96.19 E-value=0.0021 Score=61.20 Aligned_cols=70 Identities=21% Similarity=0.149 Sum_probs=48.6
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCchhHHH-H-------hhcCcE--EcCHHHHhccCCEEEecCCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDPICALQ-A-------AMEGFL--VVTMEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~~-A-------~~~G~~--v~~~~e~l~~aDvvi~atG~ 875 (1027)
...++|+|+|.|.+|..+|..+...|. +|..+|+++.++.- + ...+.. ...-.++++.||+|+.++|.
T Consensus 3 ~~~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~~~~adivvitag~ 82 (146)
T d1ez4a1 3 PNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGA 82 (146)
T ss_dssp TTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHHhccccEEEEeccc
Confidence 456799999999999999999988773 89999999855431 1 112211 12223567889999988876
Q ss_pred cc
Q psy15208 876 YH 877 (1027)
Q Consensus 876 ~~ 877 (1027)
+.
T Consensus 83 ~~ 84 (146)
T d1ez4a1 83 PQ 84 (146)
T ss_dssp --
T ss_pred cc
Confidence 53
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=96.18 E-value=0.0037 Score=60.84 Aligned_cols=90 Identities=12% Similarity=0.021 Sum_probs=64.9
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEE---------cCHH---HHhccCCEEEecCCCcccC
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLV---------VTME---YAKKYGDIFVTCTGNYHVI 879 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v---------~~~~---e~l~~aDvvi~atG~~~vi 879 (1027)
+|+|||.|.+|..+|+.|...|.+|.++|+++.+.......+... .+.+ ..+..++.++.+......+
T Consensus 3 kIGvIGlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (178)
T d1pgja2 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT 82 (178)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred EEEEEeehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchh
Confidence 589999999999999999999999999999998877655544321 1122 2234566766665544322
Q ss_pred c---HHHHhcCCCCeEEEEecCCCc
Q psy15208 880 T---HDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 880 ~---~~~~~~mk~gailvNvG~~d~ 901 (1027)
. ......++++.++++.+..+.
T Consensus 83 ~~~~~~~~~~~~~~~iii~~st~~~ 107 (178)
T d1pgja2 83 DSTIEQLKKVFEKGDILVDTGNAHF 107 (178)
T ss_dssp HHHHHHHHHHCCTTCEEEECCCCCH
T ss_pred hhhhhhhhhhccccceecccCccch
Confidence 2 244677999999999987643
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.14 E-value=0.0033 Score=62.35 Aligned_cols=68 Identities=18% Similarity=0.100 Sum_probs=54.0
Q ss_pred cCCEEEEEc-CChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEc--------CHHHHhccCCEEEecCCCc
Q psy15208 809 AGKIAVIIG-YGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVV--------TMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 809 ~Gk~VvViG-~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~--------~~~e~l~~aDvvi~atG~~ 876 (1027)
..|+|+|+| .|.||+.+++.|...|.+|+++.++|.+.......+++++ ++.+++..+|+||.+.|..
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~ 78 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR 78 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccC
Confidence 468999999 5999999999999999999999999877544344555533 2567788999999988753
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.14 E-value=0.006 Score=59.93 Aligned_cols=89 Identities=22% Similarity=0.138 Sum_probs=56.8
Q ss_pred EEEEEcCChhHHHHHHHHHhCC-CEE-EEEcCCchhHHHH-hhcCc-----------------EE-cCHHHHhccCCEEE
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALS-AQV-WIIEIDPICALQA-AMEGF-----------------LV-VTMEYAKKYGDIFV 870 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~G-a~V-iV~d~dp~r~~~A-~~~G~-----------------~v-~~~~e~l~~aDvvi 870 (1027)
+|+|.|||+|||.+++.+.... .+| .+.|..|.....+ ...+. .+ .++.++..++|+|+
T Consensus 3 KVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiVi 82 (178)
T d1b7go1 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV 82 (178)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCEEE
Confidence 6999999999999999999765 464 4567777443332 22221 11 13455566799999
Q ss_pred ecCCCcccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 871 TCTGNYHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 871 ~atG~~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
+|||...- .+..-..++.|..++-.|..+.
T Consensus 83 ecTG~f~~-~e~a~~hl~~G~KvIi~~~~~~ 112 (178)
T d1b7go1 83 DTTPNGVG-AQYKPIYLQLQRNAIFQGGEKA 112 (178)
T ss_dssp ECCSTTHH-HHHHHHHHHTTCEEEECTTSCG
T ss_pred ECCCCcCC-HHHHHHHHHcCCEEEEECCCCc
Confidence 99996421 1112233567777777776543
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.13 E-value=0.0037 Score=64.27 Aligned_cols=42 Identities=21% Similarity=0.332 Sum_probs=37.6
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
.|.||+++|.|.+. ||+.+|+.+...|++|+++++++.++.+
T Consensus 2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~ 44 (242)
T d1cyda_ 2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVS 44 (242)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 47999999999987 9999999999999999999998766544
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.12 E-value=0.008 Score=68.91 Aligned_cols=112 Identities=13% Similarity=0.041 Sum_probs=71.9
Q ss_pred CCccEEEEECCCCCCCCCCChHHHHHHHHHHH-hCCcEEEEEcCCC----CCCC------C-CCCCCccchHHHHHHHHH
Q psy15208 31 KLKGVVLIAHPHPLFGGTMDNKVVQTLVRVML-SLGYISIRMNFRG----VGAS------S-GTYDSGNGETDDMEILLR 98 (1027)
Q Consensus 31 ~~~pvVVllHG~~~~gGs~~~~~~~~la~~La-~~Gy~Vla~DlrG----hG~S------~-g~~~~~~~~~~Dv~avl~ 98 (1027)
...|++|++||++...|+.....+.. ..|+ ....-|+.++||- +=.. . ........-+.|...+++
T Consensus 137 ~~lPV~V~ihGG~f~~Gs~~~~~~~~--~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~ 214 (571)
T d1dx4a_ 137 NGLPILIWIYGGGFMTGSATLDIYNA--DIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIR 214 (571)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCC--HHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCccCCCCcccccch--hhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHH
Confidence 45799999999876555543322322 2233 3368889999972 1100 0 000122335899999999
Q ss_pred HHHHh---CCCC--cEEEEEechhHHHHHHHHHhcCCcCCccEEEEEccCC
Q psy15208 99 YIQKK---YPYL--PIILAGFSFGTFVQAKLQKRLDKEISIKILILISVAV 144 (1027)
Q Consensus 99 ~L~~~---~~~~--pviLVGhSmGG~vAl~~A~~~p~~~~V~gLVli~p~~ 144 (1027)
|+++. ++.+ +|.|+|||.||..+.........+..+..+|+.++..
T Consensus 215 WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~ 265 (571)
T d1dx4a_ 215 WLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 265 (571)
T ss_dssp HHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceecccc
Confidence 99974 4444 4999999999998876665433334678888887654
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.10 E-value=0.0037 Score=59.95 Aligned_cols=70 Identities=16% Similarity=0.060 Sum_probs=50.9
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhh--------cCcE-----EcCHHHHhccCCEEEec
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAM--------EGFL-----VVTMEYAKKYGDIFVTC 872 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~--------~G~~-----v~~~~e~l~~aDvvi~a 872 (1027)
+-.-++|+|+|.|.||..+|..++..+. +++++|+++.++....+ .+.. ..+.+++++.+|+|+.+
T Consensus 4 ~~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVvit 83 (154)
T d1pzga1 4 VQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVT 83 (154)
T ss_dssp CSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEEC
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEEEe
Confidence 3456899999999999999988887774 89999999855432111 1221 12356788999999988
Q ss_pred CCCc
Q psy15208 873 TGNY 876 (1027)
Q Consensus 873 tG~~ 876 (1027)
.|..
T Consensus 84 ag~~ 87 (154)
T d1pzga1 84 AGLT 87 (154)
T ss_dssp CSCS
T ss_pred cccc
Confidence 7643
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=96.08 E-value=0.0036 Score=56.85 Aligned_cols=43 Identities=21% Similarity=0.287 Sum_probs=37.0
Q ss_pred cCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhH
Q psy15208 804 TDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICA 846 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~ 846 (1027)
|.+...+.+|+|+|.|..||.+|..++.+|.+|+|+|.++...
T Consensus 5 ~~~~~~~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~~~P 47 (111)
T d1kjqa2 5 TALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAP 47 (111)
T ss_dssp CTTSTTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCG
T ss_pred CCCCCCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCCCCc
Confidence 3444567789999999999999999999999999999887543
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=96.05 E-value=0.0061 Score=58.12 Aligned_cols=89 Identities=11% Similarity=0.009 Sum_probs=61.8
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCCCccc---CcHHHHhcCC
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTGNYHV---ITHDHMRDMK 888 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG~~~v---i~~~~~~~mk 888 (1027)
+|++||.|..|.++|++|...|-.| +++.++.+.......+.......+.+.++|+++.+..+... .....+..++
T Consensus 2 kIg~IGlG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~ 80 (156)
T d2cvza2 2 KVAFIGLGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR 80 (156)
T ss_dssp CEEEECCSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred eEEEEeHHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence 6999999999999999999888665 45555545444333333334445666789998887655421 1223477899
Q ss_pred CCeEEEEecCCCc
Q psy15208 889 DQAIVCNIGHFDN 901 (1027)
Q Consensus 889 ~gailvNvG~~d~ 901 (1027)
++.++++.+..+.
T Consensus 81 ~~~~iid~sT~~p 93 (156)
T d2cvza2 81 EGTYWVDATSGEP 93 (156)
T ss_dssp TTEEEEECSCCCH
T ss_pred ccccccccccCCH
Confidence 9999999988754
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.02 E-value=0.0063 Score=62.80 Aligned_cols=42 Identities=21% Similarity=0.285 Sum_probs=38.0
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
.|.||+++|.|.+. ||+.+|+.|...|++|+++++++.+..+
T Consensus 2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~ 44 (251)
T d1vl8a_ 2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASE 44 (251)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 57899999999988 9999999999999999999999866543
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.00 E-value=0.0062 Score=62.89 Aligned_cols=44 Identities=30% Similarity=0.373 Sum_probs=38.5
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHHh
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQAA 850 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~ 850 (1027)
.|.||+++|.|.+. ||+++|+.+...|++|+++++++.++.+..
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~ 47 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALE 47 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 47999999999876 999999999999999999999986655433
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=95.96 E-value=0.008 Score=61.61 Aligned_cols=43 Identities=16% Similarity=0.226 Sum_probs=38.2
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQA 849 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A 849 (1027)
.|.||+++|.|.+. ||+.+|+.+...|++|+++++++.++.++
T Consensus 2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~ 45 (242)
T d1ulsa_ 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA 45 (242)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 37899999999876 99999999999999999999998665543
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=95.90 E-value=0.0082 Score=58.52 Aligned_cols=89 Identities=22% Similarity=0.223 Sum_probs=58.2
Q ss_pred CEEEEEcCChhHHHHHHHHHhCC-CE-EEEEcCCchhH-HHHhhcCcEE-c------------------CHHHHhccCCE
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALS-AQ-VWIIEIDPICA-LQAAMEGFLV-V------------------TMEYAKKYGDI 868 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~G-a~-ViV~d~dp~r~-~~A~~~G~~v-~------------------~~~e~l~~aDv 868 (1027)
++|+|-|||+|||.+.+.+...+ .+ |.+.|.+|.-. ..+...++++ . +..+++.++|+
T Consensus 2 ~~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vDv 81 (171)
T d1cf2o1 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (171)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred eEEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCCCE
Confidence 48999999999999999988776 35 44567776432 2344444432 1 13344567999
Q ss_pred EEecCCCcccCcHHHHhcCCCCeEEEEecCCC
Q psy15208 869 FVTCTGNYHVITHDHMRDMKDQAIVCNIGHFD 900 (1027)
Q Consensus 869 vi~atG~~~vi~~~~~~~mk~gailvNvG~~d 900 (1027)
|++|||.-.-. +..-..++.|+.++-.+...
T Consensus 82 ViEcTG~f~~~-~~~~~hl~~G~K~vi~~~~~ 112 (171)
T d1cf2o1 82 VIDCTPEGIGA-KNLKMYKEKGIKAIFQGGEK 112 (171)
T ss_dssp EEECCSTTHHH-HHHHHHHHTTCEEEECTTSC
T ss_pred EEEccCCCCCH-HHHHHHHHcCCCEEEECCCC
Confidence 99999974211 12223466788888887763
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=95.82 E-value=0.0085 Score=56.70 Aligned_cols=65 Identities=12% Similarity=0.027 Sum_probs=48.8
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhH----HHHhhcCcEEcC--------HHHH-hccCCEEEecCCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICA----LQAAMEGFLVVT--------MEYA-KKYGDIFVTCTGNY 876 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~----~~A~~~G~~v~~--------~~e~-l~~aDvvi~atG~~ 876 (1027)
.++|+|+|.+|+.+++.|...|.+|+++|.||.+. .+....|+.++. ++++ +.++|.||.++++.
T Consensus 5 HiII~G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~d 82 (153)
T d1id1a_ 5 HFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccccH
Confidence 58999999999999999999999999999998542 234445776542 2222 34688888888654
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=95.80 E-value=0.011 Score=58.01 Aligned_cols=36 Identities=22% Similarity=0.258 Sum_probs=34.1
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
..+|+|+|||.|+.|..+|..|+..|.+|+++|.++
T Consensus 41 ~~~k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~~~ 76 (179)
T d1ps9a3 41 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHS 76 (179)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCcEEEEECccHHHHHHHHHHHhhccceEEEeccC
Confidence 578999999999999999999999999999999876
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.78 E-value=0.0077 Score=57.23 Aligned_cols=68 Identities=21% Similarity=0.261 Sum_probs=47.9
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCchhHHH-------Hhh-cC--cEE-cCHHHHhccCCEEEecCCC
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDPICALQ-------AAM-EG--FLV-VTMEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~~-------A~~-~G--~~v-~~~~e~l~~aDvvi~atG~ 875 (1027)
.+++|+|+|+|.||..+|..+...|. ++..+|+++.++.- +.. .+ ..+ ..-.+++++||+||.+.|.
T Consensus 5 ~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~daDvvvitag~ 84 (148)
T d1ldna1 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGA 84 (148)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSC
T ss_pred CCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHhccceeEEEeccc
Confidence 57899999999999999999988775 79999999865321 111 11 111 2234667788888877765
Q ss_pred c
Q psy15208 876 Y 876 (1027)
Q Consensus 876 ~ 876 (1027)
+
T Consensus 85 ~ 85 (148)
T d1ldna1 85 N 85 (148)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.78 E-value=0.0096 Score=61.16 Aligned_cols=42 Identities=21% Similarity=0.400 Sum_probs=38.5
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
.|.||+++|.|++. ||+.+|+.+...|++|+++++++.++.+
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~ 46 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEE 46 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 48999999999998 9999999999999999999999876554
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=95.77 E-value=0.01 Score=56.27 Aligned_cols=66 Identities=21% Similarity=0.203 Sum_probs=47.3
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCchhHHHHh--------hcCcE---EcCHHHHhccCCEEEecCCCc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDPICALQAA--------MEGFL---VVTMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~~A~--------~~G~~---v~~~~e~l~~aDvvi~atG~~ 876 (1027)
|+|.|+|.|.||..+|..+...|. ++..+|+++.++.... ..... ...-.++++.||+||.+.|.+
T Consensus 2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~adiVVitaG~~ 80 (146)
T d1hyha1 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLGNI 80 (146)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEECCSCG
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHHhccccEEEEecccc
Confidence 799999999999999998888775 7999999986643211 11221 122345678899998887754
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=95.75 E-value=0.0081 Score=62.13 Aligned_cols=42 Identities=21% Similarity=0.253 Sum_probs=38.2
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
.|.||+++|.|.+. ||+++|+.+...|++|+++++++.++.+
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~ 44 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAA 44 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 47999999999998 9999999999999999999999866554
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=95.74 E-value=0.0067 Score=62.67 Aligned_cols=42 Identities=31% Similarity=0.360 Sum_probs=37.5
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
.|.||+++|.|.+. ||+++|+.+...|++|+++++++.++.+
T Consensus 2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~ 44 (256)
T d1k2wa_ 2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARA 44 (256)
T ss_dssp TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 37899999999977 9999999999999999999998765544
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=95.73 E-value=0.0053 Score=62.55 Aligned_cols=40 Identities=18% Similarity=0.189 Sum_probs=35.8
Q ss_pred ccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHH
Q psy15208 808 IAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICAL 847 (1027)
Q Consensus 808 l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~ 847 (1027)
|.||+|+|.|.+. ||+.+|+.+...|++|+++++++....
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~ 42 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK 42 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 6899999999877 999999999999999999999875443
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.70 E-value=0.0092 Score=61.30 Aligned_cols=42 Identities=26% Similarity=0.263 Sum_probs=37.9
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
.|.||+++|.|.+. ||+.+|+.+...|++|+++++++.++.+
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~ 45 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKA 45 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 47999999999977 9999999999999999999999866554
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=95.64 E-value=0.01 Score=61.31 Aligned_cols=41 Identities=15% Similarity=0.379 Sum_probs=37.2
Q ss_pred ccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 808 IAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 808 l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
|.||+|+|.|.+. ||+++|+.|...|++|+++++++.++.+
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~ 44 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEK 44 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 7899999999987 9999999999999999999999866544
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=95.63 E-value=0.0053 Score=58.31 Aligned_cols=85 Identities=12% Similarity=0.024 Sum_probs=58.1
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCc--------EEcCHHHHhccCCEEEecCCCcccCcH--
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGF--------LVVTMEYAKKYGDIFVTCTGNYHVITH-- 881 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~--------~v~~~~e~l~~aDvvi~atG~~~vi~~-- 881 (1027)
+|+|+|.|.+|..+|..|...|.+|+++++++.+.......+. ...+..+.+..+|+|+.++...++-..
T Consensus 2 kI~IiGaG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iii~vka~~~~~~~~ 81 (167)
T d1ks9a2 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVK 81 (167)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGHHHHHH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhhhhcccceEEEeecccchHHHHH
Confidence 7999999999999999999999999999988754332111111 122345667789999999876642221
Q ss_pred HHHhcCCCCeEEEEe
Q psy15208 882 DHMRDMKDQAIVCNI 896 (1027)
Q Consensus 882 ~~~~~mk~gailvNv 896 (1027)
..-..+.++..++.+
T Consensus 82 ~l~~~~~~~~~Iv~~ 96 (167)
T d1ks9a2 82 SLASTLPVTTPILLI 96 (167)
T ss_dssp HHHTTSCTTSCEEEE
T ss_pred hhccccCcccEEeec
Confidence 112345667766664
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.61 E-value=0.0083 Score=61.57 Aligned_cols=41 Identities=20% Similarity=0.330 Sum_probs=37.1
Q ss_pred ccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 808 IAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 808 l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
|.||+|+|.|.+. ||+++|+.+...|++|+++++++.++.+
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~ 45 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE 45 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 8999999999887 9999999999999999999999865543
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=95.57 E-value=0.0061 Score=57.59 Aligned_cols=66 Identities=27% Similarity=0.308 Sum_probs=47.0
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhh--------cCc--EE--cCHHHHhccCCEEEecCCCc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAM--------EGF--LV--VTMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~--------~G~--~v--~~~~e~l~~aDvvi~atG~~ 876 (1027)
++|.|+|+|.||..+|..+...+. +++.+|+++.++....+ .+. .+ ..--+.++++|+||.+.|.+
T Consensus 2 ~KI~IIGaG~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~~~advvvitag~~ 80 (142)
T d1uxja1 2 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGAP 80 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHhcCCCEEEEeeecc
Confidence 689999999999999988887775 89999998865432111 111 12 22335678899999888754
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=95.56 E-value=0.0094 Score=62.24 Aligned_cols=42 Identities=17% Similarity=0.254 Sum_probs=37.6
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
.|.||+|+|.|.+. ||+++|+.|...|++|+++++++.++.+
T Consensus 2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~ 44 (276)
T d1bdba_ 2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAE 44 (276)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 37899999999876 9999999999999999999999866544
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.56 E-value=0.011 Score=62.35 Aligned_cols=42 Identities=19% Similarity=0.317 Sum_probs=38.2
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
.|.||+|+|.|.+. ||+++|+.+...|++|+++++++.+..+
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~ 51 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKS 51 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 58999999999988 9999999999999999999999866554
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.52 E-value=0.0032 Score=64.58 Aligned_cols=40 Identities=15% Similarity=0.141 Sum_probs=36.2
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICA 846 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~ 846 (1027)
.|.||+|+|.|.+. ||+.+|+.+...|++|++++++....
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~ 44 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP 44 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh
Confidence 47999999999997 99999999999999999999886543
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=95.52 E-value=0.008 Score=54.95 Aligned_cols=36 Identities=25% Similarity=0.264 Sum_probs=33.2
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
.+++++|+|.|.+|..+|..++.+|.+|++++..+.
T Consensus 31 ~~~~vvIiGgG~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 31 NSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp HHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred cCCcEEEECCcHHHHHHHHHhhcccceEEEEecccc
Confidence 468999999999999999999999999999998763
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=95.49 E-value=0.0061 Score=56.15 Aligned_cols=64 Identities=13% Similarity=0.127 Sum_probs=48.9
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcC----HHHH-----hccCCEEEecCCCc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVT----MEYA-----KKYGDIFVTCTGNY 876 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~----~~e~-----l~~aDvvi~atG~~ 876 (1027)
|.++|+|||.+|+.+++.|++. +|+|+|.++.+.......|+.+.. -.+. +.+|+.++.++.+.
T Consensus 1 kHivI~G~g~~g~~l~~~L~~~--~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~d 73 (129)
T d2fy8a1 1 RHVVICGWSESTLECLRELRGS--EVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNLESD 73 (129)
T ss_dssp CCEEEESCCHHHHHHHHTSCGG--GEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCSSH
T ss_pred CEEEEECCCHHHHHHHHHHcCC--CCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEeccch
Confidence 5689999999999999999765 578889999888888888887542 1222 34688888877653
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=95.48 E-value=0.021 Score=53.52 Aligned_cols=65 Identities=22% Similarity=0.194 Sum_probs=46.2
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCchhHHHHhhc--------C-cE-EcCHHHHhccCCEEEecCCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDPICALQAAME--------G-FL-VVTMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~~A~~~--------G-~~-v~~~~e~l~~aDvvi~atG~~ 876 (1027)
+|.|+|.|.||..+|..+...|. ++..+|+++.++.-..++ . .. .....++++.+|+|+.+.|.+
T Consensus 2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~~ 78 (140)
T d1a5za1 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGVP 78 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHHhcCCCEEEEecccc
Confidence 68999999999999988777664 899999998654321111 1 11 223456788999999887753
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=95.47 E-value=0.0064 Score=58.67 Aligned_cols=69 Identities=13% Similarity=0.124 Sum_probs=49.5
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCchhHH-HHh--hc-----Cc-EE--cCHHHHhccCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDPICAL-QAA--ME-----GF-LV--VTMEYAKKYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~-~A~--~~-----G~-~v--~~~~e~l~~aDvvi~atG 874 (1027)
+..++|.|+|+|.||..+|..+...|. ++..+|+++.++. +|. .+ +. .+ ..-.+.++++|+|+.+.|
T Consensus 18 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~adiVVitAg 97 (160)
T d1i0za1 18 VPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAG 97 (160)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTCSEEEECCS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcccccEEEEecC
Confidence 567899999999999999999999886 7999999875542 121 11 11 11 123456778998888777
Q ss_pred Cc
Q psy15208 875 NY 876 (1027)
Q Consensus 875 ~~ 876 (1027)
.+
T Consensus 98 ~~ 99 (160)
T d1i0za1 98 VR 99 (160)
T ss_dssp CC
T ss_pred Cc
Confidence 54
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=95.45 E-value=0.0058 Score=61.61 Aligned_cols=34 Identities=24% Similarity=0.322 Sum_probs=32.4
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
||+|+|||.|+-|..+|..|+..|.+|+|+|..+
T Consensus 1 ~KkV~IIGaG~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 7999999999999999999999999999999765
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=95.43 E-value=0.015 Score=59.59 Aligned_cols=40 Identities=25% Similarity=0.392 Sum_probs=36.1
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICA 846 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~ 846 (1027)
.|.||+++|.|.+. ||+++|+.+...|++|+++++++...
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~ 42 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE 42 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH
Confidence 37899999999987 99999999999999999999987543
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=95.39 E-value=0.016 Score=60.11 Aligned_cols=40 Identities=20% Similarity=0.353 Sum_probs=35.4
Q ss_pred ccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchh
Q psy15208 806 VMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPIC 845 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r 845 (1027)
..|.||+|+|.|.+. ||+++|+.+...|++|++++.+...
T Consensus 14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~ 54 (272)
T d1g0oa_ 14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTE 54 (272)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchH
Confidence 358999999999766 9999999999999999999887644
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=95.33 E-value=0.0075 Score=57.07 Aligned_cols=66 Identities=17% Similarity=0.111 Sum_probs=46.7
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCchhHHH-Hh--hc-----C-cEE--cCHHHHhccCCEEEecCCCc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDPICALQ-AA--ME-----G-FLV--VTMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~~-A~--~~-----G-~~v--~~~~e~l~~aDvvi~atG~~ 876 (1027)
.+|.|+|.|.||..+|..+...|. ++..+|+++.++.- +. .+ + ..+ .+-.++++++|+||.+.|.+
T Consensus 2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~daDvVVitaG~~ 80 (143)
T d1llda1 2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPR 80 (143)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHhhCCcEEEEecccc
Confidence 479999999999999988887776 79999999865421 11 11 1 111 22345678899999888754
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=95.29 E-value=0.0096 Score=56.02 Aligned_cols=65 Identities=17% Similarity=0.149 Sum_probs=47.8
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCchhHHHHhh----------cCcEE--cCHHHHhccCCEEEecCCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDPICALQAAM----------EGFLV--VTMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~~A~~----------~G~~v--~~~~e~l~~aDvvi~atG~~ 876 (1027)
+|.|+|.|.||..+|..+...|. ++..+|+++.++..... ....+ .+..++++++|+|+.+.|.+
T Consensus 2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~dadvvvitag~~ 80 (142)
T d1guza1 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVIITAGLP 80 (142)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHHHhcCCeEEEEEEecC
Confidence 68999999999999999998884 89999999865432111 11122 34567788999999887743
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=95.25 E-value=0.0094 Score=61.87 Aligned_cols=44 Identities=25% Similarity=0.353 Sum_probs=38.9
Q ss_pred cCccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 804 TDVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 804 t~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
|| .|.||+|+|.|.+. ||+++|+.+...|++|+++++++.++.+
T Consensus 1 tn-rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~ 45 (268)
T d2bgka1 1 TN-RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQK 45 (268)
T ss_dssp CC-TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CC-CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 45 38999999999887 9999999999999999999998866554
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=95.25 E-value=0.009 Score=61.37 Aligned_cols=42 Identities=21% Similarity=0.324 Sum_probs=37.0
Q ss_pred cccCCEEEEEcC-Ch--hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 807 MIAGKIAVIIGY-GD--VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 807 ~l~Gk~VvViG~-G~--IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
+|.||+++|+|+ |. ||+++|+.++..||+|++++++..+..+
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~ 47 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ 47 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH
Confidence 489999999996 54 9999999999999999999998876544
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.23 E-value=0.0046 Score=63.02 Aligned_cols=36 Identities=22% Similarity=0.208 Sum_probs=32.6
Q ss_pred cCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 809 AGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 809 ~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
.||+|+|+|.+. ||+.+|+.+...|++|+++|+++.
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~ 37 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN 37 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 489999999976 999999999999999999988653
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.15 E-value=0.011 Score=61.38 Aligned_cols=91 Identities=19% Similarity=0.210 Sum_probs=59.5
Q ss_pred cCCEE-EEEcCCh-hHHHHHHHHHhC-CCEEEEEcCCchhHHHHhh----cCc--E-----EcCHHH---H-------hc
Q psy15208 809 AGKIA-VIIGYGD-VGKGSAQAMRAL-SAQVWIIEIDPICALQAAM----EGF--L-----VVTMEY---A-------KK 864 (1027)
Q Consensus 809 ~Gk~V-vViG~G~-IG~~vA~~a~~~-Ga~ViV~d~dp~r~~~A~~----~G~--~-----v~~~~e---~-------l~ 864 (1027)
+||+| +|.|... ||+++|+.|... |++|+++++++.+..++.. .|. . +.+.++ + ..
T Consensus 1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g 80 (275)
T d1wmaa1 1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 80 (275)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence 47887 5667666 999999988764 8999999999877654322 232 1 222221 1 12
Q ss_pred cCCEEEecCCCcc------------------------cCcHHHHhcCCCCeEEEEecCC
Q psy15208 865 YGDIFVTCTGNYH------------------------VITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 865 ~aDvvi~atG~~~------------------------vi~~~~~~~mk~gailvNvG~~ 899 (1027)
..|++|+..|... .+.+..+..||+++.++|++..
T Consensus 81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~ 139 (275)
T d1wmaa1 81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI 139 (275)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 4799998776320 1233346778888999998763
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=95.14 E-value=0.015 Score=59.94 Aligned_cols=38 Identities=32% Similarity=0.485 Sum_probs=34.9
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
+|.||+++|.|.+. ||+.+|+.|...|++|++++++..
T Consensus 1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~ 39 (260)
T d1x1ta1 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDA 39 (260)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCH
T ss_pred CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcH
Confidence 47899999999988 999999999999999999998753
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.12 E-value=0.0061 Score=59.13 Aligned_cols=35 Identities=17% Similarity=0.205 Sum_probs=32.5
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDP 843 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp 843 (1027)
.+|+|+|||.|+.|..+|..|+.+|+ .|+|+|..+
T Consensus 3 ~~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~ 38 (196)
T d1gtea4 3 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQE 38 (196)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence 48999999999999999999999999 599999876
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=95.12 E-value=0.0083 Score=56.77 Aligned_cols=35 Identities=29% Similarity=0.452 Sum_probs=32.1
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCC--CEEEEEcCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALS--AQVWIIEIDP 843 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~G--a~ViV~d~dp 843 (1027)
+||+|+|||.|.+|..+|..++.+| ++|+++|.++
T Consensus 1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 5999999999999999999999988 4899998776
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=95.11 E-value=0.011 Score=61.28 Aligned_cols=43 Identities=19% Similarity=0.252 Sum_probs=38.6
Q ss_pred ccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 806 VMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
+.|.||+++|.|.+. ||+++|+.+...|++|+++++++.++.+
T Consensus 4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~ 47 (259)
T d2ae2a_ 4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELND 47 (259)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 358999999999987 9999999999999999999998866554
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=95.02 E-value=0.021 Score=59.03 Aligned_cols=39 Identities=26% Similarity=0.241 Sum_probs=35.3
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchh
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPIC 845 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r 845 (1027)
.|.||+++|.|.+. ||+.+|+.|...|++|++++++...
T Consensus 4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~ 43 (261)
T d1geea_ 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKED 43 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHH
Confidence 48999999999877 9999999999999999999987643
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.97 E-value=0.012 Score=53.94 Aligned_cols=34 Identities=29% Similarity=0.421 Sum_probs=32.0
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
-|+++|+|.|.||..+|..++.+|++|++++..+
T Consensus 23 p~~~vIiG~G~ig~E~A~~l~~lG~~Vtii~~~~ 56 (122)
T d1v59a2 23 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP 56 (122)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCchHHHHHHHHHhhCcceeEEEecc
Confidence 4899999999999999999999999999998866
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=94.96 E-value=0.032 Score=52.95 Aligned_cols=67 Identities=16% Similarity=0.087 Sum_probs=49.0
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHH-------H-hhcCcE--E--cCHHHHhccCCEEEecCCCc
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQ-------A-AMEGFL--V--VTMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~-------A-~~~G~~--v--~~~~e~l~~aDvvi~atG~~ 876 (1027)
..+|.|+|.|.+|..+|..+...+. ++..+|+++.++.. + ...+.. + .+..+.++.+|+|+.+.|.+
T Consensus 3 ~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~advvvitag~~ 82 (150)
T d1t2da1 3 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAGFT 82 (150)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCSCS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCCCcEEEEecccc
Confidence 4689999999999999998888776 89999998855332 1 111221 1 23457788999999988754
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=94.93 E-value=0.01 Score=61.34 Aligned_cols=43 Identities=21% Similarity=0.260 Sum_probs=38.5
Q ss_pred ccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 806 VMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
+.+.||+|+|.|.+. ||+++|+.|...|++|+++++++.++.+
T Consensus 5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~ 48 (260)
T d1h5qa_ 5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVE 48 (260)
T ss_dssp ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHH
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 458999999999988 9999999999999999999998866544
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=94.89 E-value=0.013 Score=60.50 Aligned_cols=43 Identities=16% Similarity=0.262 Sum_probs=38.1
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQA 849 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A 849 (1027)
+|.||+|+|+|... ||+++|+.++..|++|+++++++.++.++
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~ 46 (258)
T d1ae1a_ 3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDEC 46 (258)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 57999999999766 99999999999999999999998665543
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.88 E-value=0.012 Score=55.75 Aligned_cols=65 Identities=15% Similarity=0.118 Sum_probs=46.9
Q ss_pred CEEEEEcC-ChhHHHHHHHHHhCCC--EEEEEcCCchhHHHHhh--cC--c---E-E---cCHHHHhccCCEEEecCCCc
Q psy15208 811 KIAVIIGY-GDVGKGSAQAMRALSA--QVWIIEIDPICALQAAM--EG--F---L-V---VTMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 811 k~VvViG~-G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~~A~~--~G--~---~-v---~~~~e~l~~aDvvi~atG~~ 876 (1027)
.+|+|+|+ |.||..+|..+...|. ++..+|+++.+.. |.. +. + . . .+..++++.+|+||.+.|.+
T Consensus 1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~-a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~ 79 (144)
T d1mlda1 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-AADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP 79 (144)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH-HHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh-hHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcC
Confidence 37999996 9999999999998886 6888999875432 221 11 1 1 1 13457788999999887753
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=94.87 E-value=0.023 Score=55.76 Aligned_cols=63 Identities=21% Similarity=0.237 Sum_probs=46.3
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcC-------------------cE-EcCHHHHhccCCEEEe
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEG-------------------FL-VVTMEYAKKYGDIFVT 871 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G-------------------~~-v~~~~e~l~~aDvvi~ 871 (1027)
+|+|+|.|.+|..+|..+ +.|.+|+.+|+|+.+.... ..| +. ..+...+..++|+++.
T Consensus 2 kI~ViGlG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l-~~g~~p~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~ii~v 79 (196)
T d1dlja2 2 KIAVAGSGYVGLSLGVLL-SLQNEVTIVDILPSKVDKI-NNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (196)
T ss_dssp EEEEECCSHHHHHHHHHH-TTTSEEEEECSCHHHHHHH-HTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred EEEEECCChhHHHHHHHH-HCCCcEEEEECCHHHHHHH-hhcccccchhhHHHHhhhhhhhhhccchhhhhhhccccccc
Confidence 689999999999999877 5799999999998654321 112 11 2234555678999998
Q ss_pred cCCCc
Q psy15208 872 CTGNY 876 (1027)
Q Consensus 872 atG~~ 876 (1027)
+++++
T Consensus 80 ~vpt~ 84 (196)
T d1dlja2 80 ATPTN 84 (196)
T ss_dssp CCCCC
T ss_pred cCCcc
Confidence 88765
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=94.84 E-value=0.013 Score=52.92 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=32.0
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
-|+|+|+|.|.+|..+|..++.+|++|++++..+
T Consensus 21 p~~vvIiGgG~ig~E~A~~l~~~G~~Vtlve~~~ 54 (116)
T d1gesa2 21 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD 54 (116)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEECCChhhHHHHHHhhccccEEEEEeecc
Confidence 4889999999999999999999999999998876
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.83 E-value=0.013 Score=52.82 Aligned_cols=35 Identities=29% Similarity=0.292 Sum_probs=32.5
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
..|+++|+|.|.||..+|..++.+|.+|++++..+
T Consensus 21 ~p~~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~ 55 (117)
T d1ebda2 21 VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG 55 (117)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCeEEEECCCccceeeeeeecccccEEEEEEecc
Confidence 35899999999999999999999999999998766
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=94.82 E-value=0.01 Score=61.30 Aligned_cols=44 Identities=30% Similarity=0.429 Sum_probs=38.8
Q ss_pred CccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 805 DVMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
++.|.||+++|.|.+. ||+++|+.+...|++|+++++++.++.+
T Consensus 6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~ 50 (255)
T d1fmca_ 6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANH 50 (255)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 3458999999999987 9999999999999999999998866544
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.81 E-value=0.014 Score=59.46 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=37.8
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
.|.||+++|.|.+. ||+++|+.|...|++|++++++...+.+
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~ 44 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEA 44 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH
Confidence 58999999999998 9999999999999999999998765543
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.75 E-value=0.011 Score=61.02 Aligned_cols=43 Identities=9% Similarity=0.136 Sum_probs=38.8
Q ss_pred ccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 806 VMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
+.|.||+|+|.|.+. ||+.+|+.+...|++|+++++++.++.+
T Consensus 4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~ 47 (259)
T d1xq1a_ 4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNE 47 (259)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 368999999999988 9999999999999999999999866554
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.70 E-value=0.012 Score=60.90 Aligned_cols=43 Identities=19% Similarity=0.317 Sum_probs=39.0
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQA 849 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A 849 (1027)
+|.||+|+|.|++. ||+++|+.+...|++|++++++..++.+.
T Consensus 11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~ 54 (269)
T d1xu9a_ 11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKV 54 (269)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 48999999999998 99999999999999999999998766543
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=94.66 E-value=0.016 Score=52.91 Aligned_cols=36 Identities=28% Similarity=0.330 Sum_probs=33.5
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
..+|+|+|+|.|.+|..+|..++.+|.+|++++..+
T Consensus 28 ~~~k~vvViGgG~iG~E~A~~l~~~g~~Vtlie~~~ 63 (123)
T d1nhpa2 28 PEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 63 (123)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCCEEEEECChHHHHHHHHHhhccceEEEEEEecC
Confidence 368999999999999999999999999999998876
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=94.65 E-value=0.012 Score=49.76 Aligned_cols=34 Identities=29% Similarity=0.520 Sum_probs=32.0
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
|+|+|+|.|..||.++..++.+|.+|.++|.++.
T Consensus 2 k~vgIlG~GQLgrMl~~Aa~~LG~~v~vldp~~~ 35 (78)
T d3etja2 2 KQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAE 35 (78)
T ss_dssp EEEEEEBCSHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred CEEEEEcCCHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence 7999999999999999999999999999988764
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=94.59 E-value=0.017 Score=59.67 Aligned_cols=41 Identities=17% Similarity=0.361 Sum_probs=37.3
Q ss_pred ccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 808 IAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 808 l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
|.||+++|.|.+. ||+++|+.+...|++|+++++++.++.+
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~ 43 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEA 43 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 6899999999988 9999999999999999999999866543
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=94.59 E-value=0.017 Score=52.52 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=31.9
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
.|+|+|+|.|.||..+|..++.+|++|+++++.+
T Consensus 22 p~~v~IiGgG~iG~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 22 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred CCEEEEECCchHHHHHHHHHHhccccceeeehhc
Confidence 5899999999999999999999999999998754
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=94.59 E-value=0.017 Score=60.45 Aligned_cols=42 Identities=31% Similarity=0.366 Sum_probs=37.4
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
.|.||+|+|.|... ||+++|+.|...|++|++++++..+..+
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~ 64 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKA 64 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHH
Confidence 58999999999655 9999999999999999999999866543
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=94.57 E-value=0.018 Score=51.95 Aligned_cols=36 Identities=11% Similarity=0.104 Sum_probs=33.8
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
..+|+|+|+|.|.||..+|..++.+|++|++++..+
T Consensus 20 ~~~~~vvVvGgG~ig~E~A~~l~~~g~~vt~i~~~~ 55 (121)
T d1mo9a2 20 EPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE 55 (121)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcchhheEeeccc
Confidence 468999999999999999999999999999998876
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.48 E-value=0.019 Score=59.12 Aligned_cols=41 Identities=15% Similarity=0.103 Sum_probs=37.7
Q ss_pred ccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 808 IAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 808 l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
+.||+|+|.|.+. ||+++|+.|...|++|+++++++.+..+
T Consensus 8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~ 49 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEE 49 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 8999999999988 9999999999999999999999866554
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=94.42 E-value=0.014 Score=60.57 Aligned_cols=41 Identities=20% Similarity=0.217 Sum_probs=37.4
Q ss_pred ccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 808 IAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 808 l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
|.||+++|.|.+. ||+++|+.+...|++|+++++++.++.+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~ 44 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEE 44 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 7899999999988 9999999999999999999999866554
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=94.38 E-value=0.015 Score=60.58 Aligned_cols=41 Identities=24% Similarity=0.285 Sum_probs=37.4
Q ss_pred ccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 808 IAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 808 l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
|.||+++|.|.+. ||+++|+.+...|++|+++++++.++.+
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~ 43 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEE 43 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 6899999999988 9999999999999999999999866554
|
| >d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=94.36 E-value=0.16 Score=48.35 Aligned_cols=102 Identities=21% Similarity=0.143 Sum_probs=74.0
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchh-----HHH----HhhcCc--E-EcCHHHHhccCCEEEecC
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPIC-----ALQ----AAMEGF--L-VVTMEYAKKYGDIFVTCT 873 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r-----~~~----A~~~G~--~-v~~~~e~l~~aDvvi~at 873 (1027)
.|.|++|+++|=|. +.+..+..+..+|++|.++-+.... ... +...+. + ..++++++..+|+|.+..
T Consensus 1 sl~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ea~~~adviy~~~ 80 (163)
T d1pvva2 1 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDV 80 (163)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEecccccCCChHHHHHHHHhhhcccceEEEecCHHHHhhhccEEeecc
Confidence 36899999999877 8889999999999999998432111 111 222232 2 457899999999998643
Q ss_pred ----C------------CcccCcHHHHhcCCCCeEEEEecCC--Ccccchhhh
Q psy15208 874 ----G------------NYHVITHDHMRDMKDQAIVCNIGHF--DNEIEVEKL 908 (1027)
Q Consensus 874 ----G------------~~~vi~~~~~~~mk~gailvNvG~~--d~eid~~~l 908 (1027)
+ ..-.++.+.++.+|+++++.-.+.. ..||+-+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~y~v~~~~l~~ak~~~iimHplP~~Rg~EI~~~v~ 133 (163)
T d1pvva2 81 WASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDDVI 133 (163)
T ss_dssp CCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBCHHHH
T ss_pred eeecccchhhHHHHHHhhhhhHHHHHHHhhCCCeEEecCCccccccccchhhh
Confidence 1 1135788889999999999999984 577776644
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=94.35 E-value=0.024 Score=58.08 Aligned_cols=41 Identities=22% Similarity=0.262 Sum_probs=35.6
Q ss_pred ccccCCEEEEEcCC---hhHHHHHHHHHhCCCEEEEEcCCchhH
Q psy15208 806 VMIAGKIAVIIGYG---DVGKGSAQAMRALSAQVWIIEIDPICA 846 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G---~IG~~vA~~a~~~Ga~ViV~d~dp~r~ 846 (1027)
+.|.||+++|.|++ .||+++|+.|...|++|++++++....
T Consensus 4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~ 47 (256)
T d1ulua_ 4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLR 47 (256)
T ss_dssp ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHH
Confidence 45899999999985 499999999999999999998876433
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.33 E-value=0.013 Score=53.56 Aligned_cols=34 Identities=12% Similarity=0.107 Sum_probs=31.3
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
-++++|+|.|.||..+|..++.+|++|++++.++
T Consensus 20 P~~vvIIGgG~iG~E~A~~l~~lG~~Vtii~~~~ 53 (122)
T d1h6va2 20 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSI 53 (122)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCeEEEECCCccHHHHHHHHhhcCCeEEEEEech
Confidence 4789999999999999999999999999998764
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=94.30 E-value=0.041 Score=56.45 Aligned_cols=39 Identities=13% Similarity=0.181 Sum_probs=35.4
Q ss_pred CCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 810 GKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 810 Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
||.++|.|.+. ||+++|+.|...|++|+++++++.++.+
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~ 41 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRT 41 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 89999999988 9999999999999999999999866554
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=94.18 E-value=0.26 Score=48.55 Aligned_cols=134 Identities=16% Similarity=0.096 Sum_probs=79.5
Q ss_pred cEEEEECCCCCCCCCCC--hHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC--CC-CCccchHHHHHHHHHHHHHhCCCCc
Q psy15208 34 GVVLIAHPHPLFGGTMD--NKVVQTLVRVMLSLGYISIRMNFRGVGASSG--TY-DSGNGETDDMEILLRYIQKKYPYLP 108 (1027)
Q Consensus 34 pvVVllHG~~~~gGs~~--~~~~~~la~~La~~Gy~Vla~DlrGhG~S~g--~~-~~~~~~~~Dv~avl~~L~~~~~~~p 108 (1027)
-.||+.-|-++..+... ......+...+...+..+..++++-.....+ .+ .+...-+.++...+.....+.|..+
T Consensus 18 v~vi~aRGT~E~~~~G~~g~~~~~~l~~~~~~~~v~~~~v~~~y~a~~~~~~~~~~s~~~G~~~~~~~i~~~a~~CP~tk 97 (197)
T d1cexa_ 18 VIFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDAT 97 (197)
T ss_dssp EEEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred eEEEEecCCCCCCCCCcccHHHHHHHHHhcCCCcceEeeeccccccccccccccccchhHHHHHHHHHHHHHHhhCCCCe
Confidence 45778888655332111 1122334444544556677777653221111 11 1223346778888888888999999
Q ss_pred EEEEEechhHHHHHHHHHhcCC--cCCccEEEEEccCCCcCC---CCC-CCCcEEEEEeCCCCCC
Q psy15208 109 IILAGFSFGTFVQAKLQKRLDK--EISIKILILISVAVKKWL---IPE-VPKNTIIIHGELDEII 167 (1027)
Q Consensus 109 viLVGhSmGG~vAl~~A~~~p~--~~~V~gLVli~p~~~~~~---l~~-i~~PvLiIhG~~D~iV 167 (1027)
++|+|+|+|+.++-.++...+. ..+|.++++++-+....- ++. ....+.-++-..|.++
T Consensus 98 iVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP~~~~~~g~~p~~~~~r~~~~C~~gD~vC 162 (197)
T d1cexa_ 98 LIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYTKNLQNRGRIPNYPADRTKVFCNTGDLVC 162 (197)
T ss_dssp EEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCTTTTTTTTCCTTSCGGGEEEECCTTCGGG
T ss_pred EEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCCCCCCCCCCCCCCcchhhheecCCCCCee
Confidence 9999999999999888876543 126899999985543221 111 1233556666666554
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.18 E-value=0.025 Score=58.08 Aligned_cols=41 Identities=24% Similarity=0.454 Sum_probs=36.8
Q ss_pred ccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 808 IAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 808 l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
+.||+|+|.|.+. ||+++|+.+...|++|+++++++.+..+
T Consensus 1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~ 42 (254)
T d2gdza1 1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQ 42 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 4699999999977 9999999999999999999999876554
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=94.15 E-value=0.026 Score=57.52 Aligned_cols=42 Identities=12% Similarity=0.262 Sum_probs=38.1
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
.|.||+|+|.|.+. ||+.+|+.+...|++|++++++..++.+
T Consensus 2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~ 44 (241)
T d2a4ka1 2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAE 44 (241)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 37899999999998 9999999999999999999999866554
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=94.14 E-value=0.018 Score=59.10 Aligned_cols=41 Identities=24% Similarity=0.246 Sum_probs=37.3
Q ss_pred ccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 808 IAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 808 l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
|.||+++|.|.+. ||+.+|+.+...|++|+++++++.++.+
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~ 45 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEK 45 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 7999999999877 9999999999999999999998866554
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.14 E-value=0.024 Score=51.91 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=31.9
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
-|+|+|+|.|.||..+|..++.+|.+|++++..+
T Consensus 22 pk~vvIvGgG~iG~E~A~~l~~~G~~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD 55 (125)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEEcCCccHHHHHHHHhcCCcEEEEEeecc
Confidence 4899999999999999999999999999998865
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=94.14 E-value=0.015 Score=53.19 Aligned_cols=35 Identities=23% Similarity=0.350 Sum_probs=32.8
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
..|+++|+|.|.||..+|..++.+|++|++++..+
T Consensus 24 ~p~~~viiG~G~iglE~A~~~~~~G~~Vtvi~~~~ 58 (123)
T d1dxla2 24 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS 58 (123)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred cCCeEEEEccchHHHHHHHHHHhcCCeEEEEEEcc
Confidence 36899999999999999999999999999998876
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=94.13 E-value=0.027 Score=55.41 Aligned_cols=85 Identities=15% Similarity=0.149 Sum_probs=60.9
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh--------cCc------E-EcCHHHHhccCCEEEecCCC
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM--------EGF------L-VVTMEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~--------~G~------~-v~~~~e~l~~aDvvi~atG~ 875 (1027)
++|+|+|+|.-|.++|..|...|-+|+++++|+.....-.. .++ . ..++++++..+|+|+.|+++
T Consensus 8 ~KI~ViGaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~iiiavPs 87 (189)
T d1n1ea2 8 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT 87 (189)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEEECSCH
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccCCCCEEEEcCcH
Confidence 58999999999999999999999899999998855443211 122 2 33588999999999999976
Q ss_pred cccCcHHHHhcC---------CCCeEEEEec
Q psy15208 876 YHVITHDHMRDM---------KDQAIVCNIG 897 (1027)
Q Consensus 876 ~~vi~~~~~~~m---------k~gailvNvG 897 (1027)
.. +. +.++.+ +++..++++.
T Consensus 88 ~~-~~-~~~~~~~~~~~~~~~~~~~~ii~~t 116 (189)
T d1n1ea2 88 QF-LR-GFFEKSGGNLIAYAKEKQVPVLVCT 116 (189)
T ss_dssp HH-HH-HHHHHHCHHHHHHHHHHTCCEEECC
T ss_pred HH-HH-HHHHHHHhhhhhhhccCCcEEEEEE
Confidence 53 22 233333 4566677653
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=94.12 E-value=0.025 Score=51.55 Aligned_cols=35 Identities=26% Similarity=0.393 Sum_probs=33.2
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
.+++++|+|.|.+|..+|..++.+|.+|++++..+
T Consensus 29 ~~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~ 63 (121)
T d1d7ya2 29 PQSRLLIVGGGVIGLELAATARTAGVHVSLVETQP 63 (121)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCeEEEECcchhHHHHHHHhhcccceEEEEeecc
Confidence 57999999999999999999999999999998876
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=94.12 E-value=0.018 Score=59.43 Aligned_cols=41 Identities=24% Similarity=0.284 Sum_probs=37.2
Q ss_pred ccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 808 IAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 808 l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
|.||+++|.|.+. ||+++|+.+...|++|+++++++.++.+
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~ 44 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEE 44 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 7899999999977 9999999999999999999998866554
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.11 E-value=0.019 Score=54.11 Aligned_cols=65 Identities=23% Similarity=0.119 Sum_probs=46.2
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCchhHHH-------Hh-hcCc--EEc--CHHHHhccCCEEEecCCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDPICALQ-------AA-MEGF--LVV--TMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~~-------A~-~~G~--~v~--~~~e~l~~aDvvi~atG~~ 876 (1027)
+|.|+|.|.+|..+|..+...|. ++..+|+++.++.- +. .... .+. .-.++++.+|+|+.+.|.+
T Consensus 2 KI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~~~~adiVvitag~~ 80 (142)
T d1ojua1 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA 80 (142)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred EEEEECcCHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHHhccccEEEEecccc
Confidence 68999999999999999987775 79999999866421 11 1111 222 2246788899998887743
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=94.10 E-value=0.024 Score=51.40 Aligned_cols=35 Identities=23% Similarity=0.218 Sum_probs=32.2
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
..++++|+|.|.||..+|..++.+|++|++++..+
T Consensus 21 ~p~~i~IiG~G~ig~E~A~~l~~~G~~Vtiv~~~~ 55 (119)
T d3lada2 21 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD 55 (119)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEEeec
Confidence 45899999999999999999999999999998655
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=94.10 E-value=0.043 Score=51.48 Aligned_cols=66 Identities=24% Similarity=0.240 Sum_probs=43.3
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCchhHH-HHh--hcCc------EEc-CHHHHhccCCEEEecCCCc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDPICAL-QAA--MEGF------LVV-TMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~-~A~--~~G~------~v~-~~~e~l~~aDvvi~atG~~ 876 (1027)
++|+|+|+|.||..+|..+...|. ++..+|+++.++. ++. .++. .+. .-.++++.+|+|+.+.|.+
T Consensus 2 ~KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~~ 79 (142)
T d1y6ja1 2 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGAN 79 (142)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhCCCceEEEecccc
Confidence 478999999999999998888776 7999999885532 221 1111 111 2345677889888877644
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=94.08 E-value=0.0086 Score=60.80 Aligned_cols=36 Identities=11% Similarity=0.123 Sum_probs=31.7
Q ss_pred CCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchh
Q psy15208 810 GKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPIC 845 (1027)
Q Consensus 810 Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r 845 (1027)
+.+|+|+|.+. ||+++|+.+...|++|+++|+++..
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~ 38 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND 38 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchh
Confidence 45789999887 9999999999999999999988643
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=93.95 E-value=0.11 Score=53.73 Aligned_cols=42 Identities=14% Similarity=0.237 Sum_probs=33.6
Q ss_pred chHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhcC
Q psy15208 88 GETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRLD 129 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~p 129 (1027)
....++...++.+...++..++++.|||+||++|..++....
T Consensus 119 ~~~~~v~~~v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~l~ 160 (269)
T d1tiba_ 119 SVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLR 160 (269)
T ss_dssp HHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCcceeeeccchHHHHHHHHHHHHH
Confidence 345566666677777788889999999999999999987654
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.95 E-value=0.02 Score=55.06 Aligned_cols=69 Identities=13% Similarity=0.117 Sum_probs=46.9
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCchhHHH-Hh-------hcCcE---EcCHHHHhccCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDPICALQ-AA-------MEGFL---VVTMEYAKKYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r~~~-A~-------~~G~~---v~~~~e~l~~aDvvi~atG 874 (1027)
+.-.+|+|+|+|.||..+|..+...|. ++..+|.++.++.- |. ..+.. ...-.+.+..+|+||.+.|
T Consensus 17 ~~~~KI~IIGaG~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~adivvitag 96 (159)
T d2ldxa1 17 LSRCKITVVGVGDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANSKLVIITAG 96 (159)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTEEEEEECCS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhhccccEEEEecc
Confidence 455689999999999999999998886 79999998755321 11 11211 1123345567788877766
Q ss_pred Cc
Q psy15208 875 NY 876 (1027)
Q Consensus 875 ~~ 876 (1027)
.+
T Consensus 97 ~~ 98 (159)
T d2ldxa1 97 AR 98 (159)
T ss_dssp CC
T ss_pred cc
Confidence 54
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=93.94 E-value=0.026 Score=56.16 Aligned_cols=36 Identities=28% Similarity=0.316 Sum_probs=32.8
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
-.-|+|+|||.|..|..+|..|+..|.+|+|+|.++
T Consensus 4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCcEEEECccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 345799999999999999999999999999999865
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.91 E-value=0.031 Score=53.07 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=33.3
Q ss_pred EEEEE-cCChhHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 812 IAVII-GYGDVGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 812 ~VvVi-G~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
+|+|+ |.|.+|+++|+.|...|.+|+++++++.++..
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~ 39 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEA 39 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 57888 78999999999999999999999999976554
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=93.86 E-value=0.02 Score=55.28 Aligned_cols=79 Identities=15% Similarity=0.249 Sum_probs=54.1
Q ss_pred EEEEEcCChhHHHHHHHHHhC-CCE-EEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCCCcccCcHHHHhcCC
Q psy15208 812 IAVIIGYGDVGKGSAQAMRAL-SAQ-VWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMK 888 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~-Ga~-ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk 888 (1027)
+|+|+|+|.||+..+..++.. +++ |.|+++++.... ..++. ..+.++.+.+.|+|+.||++.. -..-..+.++
T Consensus 5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~---~~~~~~~~~~~~~~~~~D~Vvi~tp~~~-h~~~a~~aL~ 80 (170)
T d1f06a1 5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT---KTPVFDVADVDKHADDVDVLFLCMGSAT-DIPEQAPKFA 80 (170)
T ss_dssp EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS---SSCEEEGGGGGGTTTTCSEEEECSCTTT-HHHHHHHHHT
T ss_pred eEEEECChHHHHHHHHHHHhCCCcEEEEEEeccccccc---ccccccchhhhhhccccceEEEeCCCcc-cHHHHHHHHH
Confidence 699999999999999999986 455 446777764332 22332 3345666678999999987653 2223356678
Q ss_pred CCeEEE
Q psy15208 889 DQAIVC 894 (1027)
Q Consensus 889 ~gailv 894 (1027)
.|.-++
T Consensus 81 aG~~vv 86 (170)
T d1f06a1 81 QFACTV 86 (170)
T ss_dssp TTSEEE
T ss_pred CCCcEE
Confidence 887554
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=93.85 E-value=0.024 Score=50.92 Aligned_cols=34 Identities=32% Similarity=0.394 Sum_probs=32.1
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
.++++|+|.|.+|..+|..++.+|++|++++..+
T Consensus 21 p~~vvIiGgG~~G~E~A~~l~~~g~~Vtlve~~~ 54 (115)
T d1lvla2 21 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE 54 (115)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHhhcccceEEEeeec
Confidence 4899999999999999999999999999998865
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=93.80 E-value=0.028 Score=57.65 Aligned_cols=42 Identities=19% Similarity=0.236 Sum_probs=37.5
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
.+.+|+++|.|.+. ||+.+|+.|...|++|+++++++.++.+
T Consensus 7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~ 49 (251)
T d2c07a1 7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDS 49 (251)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHH
Confidence 57899999999976 9999999999999999999998866544
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=93.66 E-value=0.026 Score=58.69 Aligned_cols=40 Identities=25% Similarity=0.323 Sum_probs=35.5
Q ss_pred CccccCCEEEEEcCC---hhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 805 DVMIAGKIAVIIGYG---DVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 805 ~~~l~Gk~VvViG~G---~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
.+.|.||+++|.|++ .||+++|+.|+..||+|+++++++.
T Consensus 3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~ 45 (297)
T d1d7oa_ 3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPA 45 (297)
T ss_dssp CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHH
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchh
Confidence 356899999999986 5999999999999999999987653
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.57 E-value=0.68 Score=50.21 Aligned_cols=131 Identities=10% Similarity=0.086 Sum_probs=78.0
Q ss_pred EEEEecCCceEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHH----------HHh------CCcEEEE
Q psy15208 7 FFNINGSVGILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRV----------MLS------LGYISIR 70 (1027)
Q Consensus 7 ~i~I~t~dG~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~----------La~------~Gy~Vla 70 (1027)
.+.+...+..++.+++...+. ...+|+++++-|++. ++. .+-.+.+. +.. +-..++-
T Consensus 20 yl~v~~~~~~lfyw~~~s~~~--~~~~Pl~~WlnGGPG--~SS---~~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllf 92 (421)
T d1wpxa1 20 YLDVEDEDKHFFFWTFESRND--PAKDPVILWLNGGPG--CSS---LTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIF 92 (421)
T ss_dssp EEECTTSCCEEEEEEECCSSC--TTTSCEEEEECCTTT--BCT---HHHHHHTTSSEEECTTSCEEECTTCGGGSSEEEE
T ss_pred eeecCCCCceEEEEEEEeCCC--CCCCCEEEEECCCCc--HHH---HHHHHHhcCCcEECCCCccccCCcccccccCEEE
Confidence 455543334677777665442 245799999999763 221 11111110 000 1257899
Q ss_pred EcCC-CCCCCCCCC---CCccchHHHHHHHHHHHHHhCC-----CCcEEEEEechhHHHHHHHHHhc---CC-cCCccEE
Q psy15208 71 MNFR-GVGASSGTY---DSGNGETDDMEILLRYIQKKYP-----YLPIILAGFSFGTFVQAKLQKRL---DK-EISIKIL 137 (1027)
Q Consensus 71 ~Dlr-GhG~S~g~~---~~~~~~~~Dv~avl~~L~~~~~-----~~pviLVGhSmGG~vAl~~A~~~---p~-~~~V~gL 137 (1027)
+|.| |.|.|.... .+....++|+..+++.+...+| ..|++|.|.|+||..+..+|.+. .+ ...++|+
T Consensus 93 iD~PvGtGfSy~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi 172 (421)
T d1wpxa1 93 LDQPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSV 172 (421)
T ss_dssp ECCSTTSTTCBCSSCCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEE
T ss_pred EecCCCCCceecCCccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeee
Confidence 9965 999885321 1223455666666655555554 34899999999999988877553 21 2346788
Q ss_pred EEEccCC
Q psy15208 138 ILISVAV 144 (1027)
Q Consensus 138 Vli~p~~ 144 (1027)
++.+|..
T Consensus 173 ~iGng~~ 179 (421)
T d1wpxa1 173 LIGNGLT 179 (421)
T ss_dssp EEESCCC
T ss_pred EecCCcc
Confidence 8877654
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=93.52 E-value=0.03 Score=51.43 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=32.6
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
..++++|+|.|.||..+|..++.+|++|++++..+
T Consensus 25 ~p~~vvIiGgG~IG~E~A~~~~~~G~~Vtive~~~ 59 (125)
T d1ojta2 25 VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD 59 (125)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred cCCeEEEECCCHHHHHHHHHhhcCCCEEEEEEeec
Confidence 46899999999999999999999999999998765
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=93.51 E-value=0.037 Score=51.14 Aligned_cols=36 Identities=25% Similarity=0.312 Sum_probs=33.7
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
..+++|+|+|.|.+|..+|..++..|.+|++++..+
T Consensus 33 ~~~k~v~VIGgG~iG~E~A~~l~~~g~~Vtvie~~~ 68 (133)
T d1q1ra2 33 IADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA 68 (133)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ccCCEEEEECCchHHHHHHHHHHhhCcceeeeeecc
Confidence 368999999999999999999999999999998876
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=93.40 E-value=0.052 Score=56.15 Aligned_cols=41 Identities=24% Similarity=0.421 Sum_probs=33.4
Q ss_pred chHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhc
Q psy15208 88 GETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRL 128 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~ 128 (1027)
....++...++.+...++..++++.|||+||++|..++...
T Consensus 106 ~i~~~i~~~i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~l 146 (261)
T d1uwca_ 106 SVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQL 146 (261)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCcceEEeccchhHHHHHHHHHHH
Confidence 34566677777777788888999999999999999888664
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=93.40 E-value=0.035 Score=55.82 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=32.5
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
..++|+|||+|+.|..+|..|+..|.+|+|+|.++
T Consensus 3 ~~~kV~IiGaG~aGl~~A~~L~~~G~~v~v~Er~~ 37 (265)
T d2voua1 3 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP 37 (265)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 46899999999999999999999999999999865
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.38 E-value=0.094 Score=50.63 Aligned_cols=81 Identities=10% Similarity=0.021 Sum_probs=56.3
Q ss_pred EEEEEcCChhHHHHHHHHHhC-CCEEE-EEcCCchhHHH-HhhcCc----E-EcCHHHHhc--cCCEEEecCCCcccCcH
Q psy15208 812 IAVIIGYGDVGKGSAQAMRAL-SAQVW-IIEIDPICALQ-AAMEGF----L-VVTMEYAKK--YGDIFVTCTGNYHVITH 881 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~-Ga~Vi-V~d~dp~r~~~-A~~~G~----~-v~~~~e~l~--~aDvvi~atG~~~vi~~ 881 (1027)
+++|+|+|.+|+..++.++.. +++|+ ++|+++.++.. +...++ . +.+.++++. +.|+|+.+|++.. -..
T Consensus 3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~iD~v~I~tp~~~-h~~ 81 (184)
T d1ydwa1 3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSL-HVE 81 (184)
T ss_dssp EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGG-HHH
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecCcHHHhhhccccceeeecccchh-hcc
Confidence 689999999999999999876 56755 67999877554 344443 3 457888874 5799998886642 112
Q ss_pred HHHhcCCCCeEE
Q psy15208 882 DHMRDMKDQAIV 893 (1027)
Q Consensus 882 ~~~~~mk~gail 893 (1027)
-....|+.|--+
T Consensus 82 ~~~~~l~~g~~v 93 (184)
T d1ydwa1 82 WAIKAAEKGKHI 93 (184)
T ss_dssp HHHHHHTTTCEE
T ss_pred hhhhhhhcccee
Confidence 224557777543
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.38 E-value=0.55 Score=51.16 Aligned_cols=122 Identities=16% Similarity=0.059 Sum_probs=73.9
Q ss_pred eEEEEEEecCCccccCCccEEEEECCCCCCCCCCChHHHHHHHHH-----------HHh------CCcEEEEEcCC-CCC
Q psy15208 16 ILHCAINFPSSIKLLKLKGVVLIAHPHPLFGGTMDNKVVQTLVRV-----------MLS------LGYISIRMNFR-GVG 77 (1027)
Q Consensus 16 ~I~~~l~~P~~~~~~~~~pvVVllHG~~~~gGs~~~~~~~~la~~-----------La~------~Gy~Vla~Dlr-GhG 77 (1027)
.+..+++..... ...+|+++++-|++.- +++ +-.+.+. +.. +-..++-+|+| |.|
T Consensus 33 ~lffw~~~s~~~--~~~~Pl~~wlnGGPG~-SS~----~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDqPvGtG 105 (452)
T d1ivya_ 33 HLHYWFVESQKD--PENSPVVLWLNGGPGC-SSL----DGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVG 105 (452)
T ss_dssp EEEEEEECCSSC--GGGSCEEEEECCTTTB-CTH----HHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTST
T ss_pred eEEEEEEEcCCC--CCCCCEEEEECCCCcH-HHH----HHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEecCCCcc
Confidence 666666655442 2458999999998642 211 1111100 000 13578999986 999
Q ss_pred CCCCCC----CCccchHHHHHHHHHHHHHhCC---CCcEEEEEechhHHHHHHHHHhcCC--cCCccEEEEEccCC
Q psy15208 78 ASSGTY----DSGNGETDDMEILLRYIQKKYP---YLPIILAGFSFGTFVQAKLQKRLDK--EISIKILILISVAV 144 (1027)
Q Consensus 78 ~S~g~~----~~~~~~~~Dv~avl~~L~~~~~---~~pviLVGhSmGG~vAl~~A~~~p~--~~~V~gLVli~p~~ 144 (1027)
.|.... .+....+.|+..+++.+-..++ ..|++|.|.|+||..+-.+|...-+ ...++|+++.++..
T Consensus 106 fS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~~ 181 (452)
T d1ivya_ 106 FSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLS 181 (452)
T ss_dssp TCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCS
T ss_pred cccCCCCCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCcc
Confidence 985321 1223456666444444444443 5589999999999998888765322 23578888887755
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=93.32 E-value=0.084 Score=50.31 Aligned_cols=87 Identities=20% Similarity=0.212 Sum_probs=60.0
Q ss_pred EEEEEcCChhHHH-HHHHHHhCCC-E-EEEEcCCchh--HHHHhhcCcEEcC--HHHHh-----ccCCEEEecCCCc-cc
Q psy15208 812 IAVIIGYGDVGKG-SAQAMRALSA-Q-VWIIEIDPIC--ALQAAMEGFLVVT--MEYAK-----KYGDIFVTCTGNY-HV 878 (1027)
Q Consensus 812 ~VvViG~G~IG~~-vA~~a~~~Ga-~-ViV~d~dp~r--~~~A~~~G~~v~~--~~e~l-----~~aDvvi~atG~~-~v 878 (1027)
+|+|+|+|.||+. +.+.++.+.- + +.++++++.. ...|...|+.+.. .++.+ .+.|+|+.||.+. |+
T Consensus 6 rvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~~~d~l~~~~~~~~iDiVf~ATpag~h~ 85 (157)
T d1nvmb1 6 KVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSASAHV 85 (157)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccccceeeeeecccccccCEEEEcCCchhHH
Confidence 7999999999985 5677776544 5 4566877643 3457778876543 33332 3689999999754 43
Q ss_pred CcHHHHhcCCCCeEEEEecC
Q psy15208 879 ITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 879 i~~~~~~~mk~gailvNvG~ 898 (1027)
-....+..++.|..+++-..
T Consensus 86 ~~~~~~~aa~~G~~VID~s~ 105 (157)
T d1nvmb1 86 QNEALLRQAKPGIRLIDLTP 105 (157)
T ss_dssp HHHHHHHHHCTTCEEEECST
T ss_pred HhHHHHHHHHcCCEEEEccc
Confidence 33344667899998887776
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=93.31 E-value=0.076 Score=54.29 Aligned_cols=38 Identities=26% Similarity=0.320 Sum_probs=33.0
Q ss_pred CEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHH
Q psy15208 811 KIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 811 k~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~ 848 (1027)
|.|+|.|.+. ||+++|+.+...|++|+++++++.++.+
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~ 40 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKA 40 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 4568889887 9999999999999999999999866544
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=93.22 E-value=0.028 Score=57.70 Aligned_cols=35 Identities=29% Similarity=0.354 Sum_probs=32.7
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
..|+|+|||.|..|..+|..|+..|.+|+|+|.++
T Consensus 29 ~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 29 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 56899999999999999999999999999999865
|
| >d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Mitochondrial NAD(P)-dependent malic enzyme species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.20 E-value=0.064 Score=56.21 Aligned_cols=113 Identities=14% Similarity=0.222 Sum_probs=74.9
Q ss_pred hhhhhhHHHHHh---hhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-----------EEEEEcCCch----h------
Q psy15208 790 YGCRESLIDGIK---RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-----------QVWIIEIDPI----C------ 845 (1027)
Q Consensus 790 ~g~~~s~~~~i~---r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-----------~ViV~d~dp~----r------ 845 (1027)
+||+--...++. +.++..+...++|+.|+|.-|.++|..+...++ +++++|..-. |
T Consensus 2 qGTa~V~lAglinAlki~gk~l~d~kiv~~GAGsAg~gia~ll~~~~~~~g~~~~~a~~~i~lvD~~Glv~~~r~~~~~~ 81 (294)
T d1pj3a1 2 QGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDS 81 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCT
T ss_pred cHHHHHHHHHHHHHHHHhCCCHHHcEEEEECccHHHHHHHHHHHHHHHhcCCchhhccccEEEEeCCCCccCCCCcccHH
Confidence 355554444443 355777899999999999999999998876654 4888876431 1
Q ss_pred --HHHHhhcCcE--EcCHHHHhc--cCCEEEecCCCcccCcHHHHhcC---CCCeEEEEecCCCccc
Q psy15208 846 --ALQAAMEGFL--VVTMEYAKK--YGDIFVTCTGNYHVITHDHMRDM---KDQAIVCNIGHFDNEI 903 (1027)
Q Consensus 846 --~~~A~~~G~~--v~~~~e~l~--~aDvvi~atG~~~vi~~~~~~~m---k~gailvNvG~~d~ei 903 (1027)
...+ ....+ ..++.++++ ..|++|-++|...+++++.++.| .+..++.-.+-...++
T Consensus 82 ~k~~~a-~~~~~~~~~~L~e~i~~~kptvliG~S~~~g~ft~evi~~Ma~~~~~PIIFaLSNPt~~~ 147 (294)
T d1pj3a1 82 YQEPFT-HSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQA 147 (294)
T ss_dssp TTGGGC-BCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCSSGGGC
T ss_pred HHHHhh-ccccccchhHHHHHHHhcCCceEEEecCCCCcCCHHHHHHHHhcCCCcEEEEccCCCCcC
Confidence 1111 11111 235778765 78999999988889999987654 4677776555443333
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=93.15 E-value=0.087 Score=49.93 Aligned_cols=79 Identities=8% Similarity=-0.068 Sum_probs=52.9
Q ss_pred EEEEEcCChhHHH-HHHHHHhC-CCEE-EEEcCCchhHHH-HhhcCcEE-cCHHHHhccCCEEEecCCCcccCcHHHHhc
Q psy15208 812 IAVIIGYGDVGKG-SAQAMRAL-SAQV-WIIEIDPICALQ-AAMEGFLV-VTMEYAKKYGDIFVTCTGNYHVITHDHMRD 886 (1027)
Q Consensus 812 ~VvViG~G~IG~~-vA~~a~~~-Ga~V-iV~d~dp~r~~~-A~~~G~~v-~~~~e~l~~aDvvi~atG~~~vi~~~~~~~ 886 (1027)
+|+|+|+|.+|+. .+..++.. +.++ .|+|.++.++.. +...++.. .+.++++.+.|+|+.+|.+.. -..-....
T Consensus 3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~I~tp~~~-h~~~~~~a 81 (164)
T d1tlta1 3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTAS-HFDVVSTL 81 (164)
T ss_dssp EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTH-HHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccccccchhhhhhcccccccccchh-cccccccc
Confidence 6899999999976 46666654 6664 478999877665 44556654 357777889999998886542 11122344
Q ss_pred CCCCe
Q psy15208 887 MKDQA 891 (1027)
Q Consensus 887 mk~ga 891 (1027)
|+.|-
T Consensus 82 l~~gk 86 (164)
T d1tlta1 82 LNAGV 86 (164)
T ss_dssp HHTTC
T ss_pred ccccc
Confidence 56663
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.04 E-value=0.031 Score=59.06 Aligned_cols=38 Identities=21% Similarity=0.411 Sum_probs=35.0
Q ss_pred ccccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 806 VMIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 806 ~~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
+.|.||+++|.|.+. ||+++|+.|...|++|+++|+++
T Consensus 3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~ 41 (302)
T d1gz6a_ 3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGG 41 (302)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCB
T ss_pred cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCc
Confidence 358999999999999 99999999999999999998765
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=93.00 E-value=0.053 Score=55.63 Aligned_cols=37 Identities=22% Similarity=0.337 Sum_probs=33.8
Q ss_pred cccCCEEEEEcC-C--hhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 807 MIAGKIAVIIGY-G--DVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 807 ~l~Gk~VvViG~-G--~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
.|.||+++|+|. | .||+++|+.|...|++|+++++++
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~ 41 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 41 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 478999999997 4 499999999999999999999885
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=92.99 E-value=0.044 Score=55.02 Aligned_cols=36 Identities=17% Similarity=0.259 Sum_probs=33.9
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
-.+|+|+|||.|+.|..+|..|+..|.+|+++|.++
T Consensus 47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~~v~l~E~~~ 82 (233)
T d1djqa3 47 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAE 82 (233)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCceEEEEcccHHHHHHHHHHHHhccceeeEeecc
Confidence 478999999999999999999999999999999766
|
| >d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Malate oxidoreductase (malic enzyme) species: Thermotoga maritima [TaxId: 2336]
Probab=92.92 E-value=0.37 Score=48.26 Aligned_cols=113 Identities=16% Similarity=0.197 Sum_probs=79.4
Q ss_pred hhhhhhHHHHHh---hhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCc-------------hhHHHHhhc
Q psy15208 790 YGCRESLIDGIK---RATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDP-------------ICALQAAME 852 (1027)
Q Consensus 790 ~g~~~s~~~~i~---r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp-------------~r~~~A~~~ 852 (1027)
.||+--...++. +.++..+...+++++|+|.-|.++|+.+...|. ++..+|.+- .+...+...
T Consensus 3 QGTaaV~LAgll~a~~~~g~~l~d~riv~~GAGsAg~gia~~l~~~~~~~i~~~D~~GLi~~~r~~~~~~~~~~~~~~~~ 82 (222)
T d1vl6a1 3 QGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARIT 82 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTS
T ss_pred chHHHHHHHHHHHHHHHhCCChhhcEEEEEChHHHHHHHHHHHHHhcccceEeecceeEEEcCcccccccHHHHHHHhhh
Confidence 355554444433 456778999999999999999999999999998 688888752 111122221
Q ss_pred Cc--EEcCHHHHhccCCEEEecCCCcccCcHHHHhcCCCCeEEEEecCCCccc
Q psy15208 853 GF--LVVTMEYAKKYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNIGHFDNEI 903 (1027)
Q Consensus 853 G~--~v~~~~e~l~~aDvvi~atG~~~vi~~~~~~~mk~gailvNvG~~d~ei 903 (1027)
.. ...++.+++..+++++.+. ..++++++.+..|.+.-++.-.+-...++
T Consensus 83 ~~~~~~~~l~~~l~g~~~~~g~~-~~~~~~~e~m~~~~~rPIIFpLSNPt~~~ 134 (222)
T d1vl6a1 83 NPERLSGDLETALEGADFFIGVS-RGNILKPEWIKKMSRKPVIFALANPVPEI 134 (222)
T ss_dssp CTTCCCSCHHHHHTTCSEEEECS-CSSCSCHHHHTTSCSSCEEEECCSSSCSS
T ss_pred cchhhhcchHhhccCcceecccc-ccccccHHHHhhcCCCCEEEecCCCccch
Confidence 11 1346788888999987665 67789999999998887776554443333
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=92.91 E-value=0.097 Score=55.51 Aligned_cols=35 Identities=23% Similarity=0.350 Sum_probs=31.1
Q ss_pred CCEEEEEcCC---hhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 810 GKIAVIIGYG---DVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 810 Gk~VvViG~G---~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
+|.++|.|.| .||+++|+.|...||+|++++..+.
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~ 39 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPV 39 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchh
Confidence 7899999987 5999999999999999999876553
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=92.90 E-value=0.1 Score=49.80 Aligned_cols=65 Identities=15% Similarity=-0.012 Sum_probs=44.8
Q ss_pred EEEEEcCChhHHHHHHH--HHhC----CCEEEEEcCCchhHHHHhh-------cCcE---EcCHHHHhccCCEEEecCCC
Q psy15208 812 IAVIIGYGDVGKGSAQA--MRAL----SAQVWIIEIDPICALQAAM-------EGFL---VVTMEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~--a~~~----Ga~ViV~d~dp~r~~~A~~-------~G~~---v~~~~e~l~~aDvvi~atG~ 875 (1027)
+|.|+|.|.+|...+-. ++.. +.++..+|+|+.++..+.. .... ..+.+++++.+|+||.+.|.
T Consensus 2 KIaiIGaGs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita~~ 81 (162)
T d1up7a1 2 RIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRP 81 (162)
T ss_dssp EEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECCCT
T ss_pred EEEEECCCHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEeccc
Confidence 68999999988665532 2222 3489999999987654221 2233 23578889999999998774
Q ss_pred c
Q psy15208 876 Y 876 (1027)
Q Consensus 876 ~ 876 (1027)
.
T Consensus 82 ~ 82 (162)
T d1up7a1 82 G 82 (162)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=92.88 E-value=0.063 Score=45.11 Aligned_cols=48 Identities=21% Similarity=0.136 Sum_probs=41.0
Q ss_pred ccccCCEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcC
Q psy15208 806 VMIAGKIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEG 853 (1027)
Q Consensus 806 ~~l~Gk~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G 853 (1027)
..-.|++|+|.|. |.+|....+.++.+|++|+++-.++.+.+....+|
T Consensus 28 ~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~lG 76 (77)
T d1o8ca2 28 VRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLG 76 (77)
T ss_dssp CCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHT
T ss_pred hccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHCC
Confidence 3458999999887 88999999999999999999988887777776665
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=92.78 E-value=0.051 Score=55.22 Aligned_cols=39 Identities=23% Similarity=0.297 Sum_probs=34.6
Q ss_pred cccCCEEEEEcCCh---hHHHHHHHHHhCCCEEEEEcCCchh
Q psy15208 807 MIAGKIAVIIGYGD---VGKGSAQAMRALSAQVWIIEIDPIC 845 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~---IG~~vA~~a~~~Ga~ViV~d~dp~r 845 (1027)
.|.||+|+|.|.+. ||+.+|+.+...|++|+++++++..
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~ 43 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL 43 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTT
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 47999999999864 9999999999999999999988643
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=92.70 E-value=0.092 Score=49.93 Aligned_cols=79 Identities=9% Similarity=-0.020 Sum_probs=52.5
Q ss_pred EEEEEcCChhHHH-HHHHHHhC-CCEEEEEcCCchhHHH-HhhcCcE--EcCHHHHhc-cCCEEEecCCCcccCcHHHHh
Q psy15208 812 IAVIIGYGDVGKG-SAQAMRAL-SAQVWIIEIDPICALQ-AAMEGFL--VVTMEYAKK-YGDIFVTCTGNYHVITHDHMR 885 (1027)
Q Consensus 812 ~VvViG~G~IG~~-vA~~a~~~-Ga~ViV~d~dp~r~~~-A~~~G~~--v~~~~e~l~-~aDvvi~atG~~~vi~~~~~~ 885 (1027)
+|+|+|+|.+|+. .+..++.. +..++++|.++.++.. +...+.. ..+.++++. +.|+|+.||.+.. -..-...
T Consensus 3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iD~V~I~tp~~~-H~~~~~~ 81 (167)
T d1xeaa1 3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDV-HSTLAAF 81 (167)
T ss_dssp EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGG-HHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHHHhcccccceecccccccc-ccccccc
Confidence 7899999999975 56777666 4588899999877665 3445543 345667664 5799988886542 1222234
Q ss_pred cCCCCe
Q psy15208 886 DMKDQA 891 (1027)
Q Consensus 886 ~mk~ga 891 (1027)
.++.|-
T Consensus 82 al~~gk 87 (167)
T d1xeaa1 82 FLHLGI 87 (167)
T ss_dssp HHHTTC
T ss_pred cccccc
Confidence 455553
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.70 E-value=0.12 Score=49.98 Aligned_cols=85 Identities=18% Similarity=0.172 Sum_probs=55.5
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCC--chhHHHHhhc------Cc-----E---EcCHHHHhccCCEEEecCCC
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEID--PICALQAAME------GF-----L---VVTMEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~d--p~r~~~A~~~------G~-----~---v~~~~e~l~~aDvvi~atG~ 875 (1027)
+|.|+|+|..|.++|..|...|-+|.++.++ +.....-... +. . ..++++++..+|+|+.|+..
T Consensus 2 kI~ViGaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~avps 81 (180)
T d1txga2 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVST 81 (180)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSCG
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcccch
Confidence 6899999999999999999999999998653 3211111110 00 1 23578889999999999976
Q ss_pred cccCc--HHHHhcCCCCeEEEEe
Q psy15208 876 YHVIT--HDHMRDMKDQAIVCNI 896 (1027)
Q Consensus 876 ~~vi~--~~~~~~mk~gailvNv 896 (1027)
..+-. .+....+++..+++.+
T Consensus 82 ~~~~~~~~~l~~~l~~~~ii~~t 104 (180)
T d1txga2 82 DGVLPVMSRILPYLKDQYIVLIS 104 (180)
T ss_dssp GGHHHHHHHHTTTCCSCEEEECC
T ss_pred hhhHHHHHhhccccccceecccc
Confidence 64211 1223345666555443
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=92.35 E-value=0.052 Score=51.17 Aligned_cols=65 Identities=17% Similarity=0.127 Sum_probs=44.6
Q ss_pred EEEEEcC-ChhHHHHHHHHHhCCC--EEEEEcCCchh-HHHH------h---hcCc--EE----cCHHHHhccCCEEEec
Q psy15208 812 IAVIIGY-GDVGKGSAQAMRALSA--QVWIIEIDPIC-ALQA------A---MEGF--LV----VTMEYAKKYGDIFVTC 872 (1027)
Q Consensus 812 ~VvViG~-G~IG~~vA~~a~~~Ga--~ViV~d~dp~r-~~~A------~---~~G~--~v----~~~~e~l~~aDvvi~a 872 (1027)
+|.|+|+ |.||..+|..+...|. ++..+|+++.. ..++ . ..+. ++ .+..++++.|||||.+
T Consensus 2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~aDvVVit 81 (145)
T d1hyea1 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVIIT 81 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEEC
T ss_pred EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccceEEEEe
Confidence 6999996 9999999999999885 89999988622 1111 1 1111 11 1134577889999888
Q ss_pred CCCc
Q psy15208 873 TGNY 876 (1027)
Q Consensus 873 tG~~ 876 (1027)
.|.+
T Consensus 82 AG~~ 85 (145)
T d1hyea1 82 SGVP 85 (145)
T ss_dssp CSCC
T ss_pred cccc
Confidence 7754
|
| >d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Archaeon Pyrococcus abyssi [TaxId: 29292]
Probab=92.16 E-value=0.3 Score=45.83 Aligned_cols=101 Identities=16% Similarity=0.125 Sum_probs=72.3
Q ss_pred ccCCEEEEEcC---ChhHHHHHHHHHhCCCEEEEEcCCch-----hHHHHhhcCcE---EcCHHHHhccCCEEEecCCC-
Q psy15208 808 IAGKIAVIIGY---GDVGKGSAQAMRALSAQVWIIEIDPI-----CALQAAMEGFL---VVTMEYAKKYGDIFVTCTGN- 875 (1027)
Q Consensus 808 l~Gk~VvViG~---G~IG~~vA~~a~~~Ga~ViV~d~dp~-----r~~~A~~~G~~---v~~~~e~l~~aDvvi~atG~- 875 (1027)
+.|.+|+++|= +++.+..+..+..+|++++++-+... ....+...+.. ..++++++..+|+|.+..-.
T Consensus 2 l~gl~i~~vGD~~~srV~~Sli~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~av~~aDvvy~~~~~~ 81 (157)
T d1ml4a2 2 IDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQK 81 (157)
T ss_dssp SSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCCG
T ss_pred cCCCEEEEEcCCccChHHHHHHHHHHhcCCcEEEEccchhhcchHHHHHHHhhcccceeecCHHHhhccCcEEEeecccc
Confidence 67999999998 57999999999999999988843221 12223333432 45789999999998875421
Q ss_pred --------------cccCcHHHHhcCCCCeEEEEecCCCcccchhhh
Q psy15208 876 --------------YHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKL 908 (1027)
Q Consensus 876 --------------~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l 908 (1027)
.-.++.+.++.+++.+++.-.++-+.||+-+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~mHplPRg~EI~~~V~ 128 (157)
T d1ml4a2 82 ERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPLPRVDEIHPEVD 128 (157)
T ss_dssp GGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCSCCSSSBCGGGG
T ss_pred ccccchhhHHhhcchhccCHHHHhhcCCCeEEecCCCcCceeccccc
Confidence 123566667788888888888877777776644
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=91.94 E-value=0.064 Score=54.96 Aligned_cols=39 Identities=8% Similarity=0.079 Sum_probs=33.5
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchh
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPIC 845 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r 845 (1027)
.|.||+|+|.|.+. ||+.+|+.+...|++|+++..++.+
T Consensus 2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~ 41 (254)
T d1sbya1 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN 41 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence 48999999999997 9999999999999998877554433
|
| >d1tuga1 c.78.1.1 (A:1-150,A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Escherichia coli [TaxId: 562]
Probab=91.91 E-value=0.59 Score=49.03 Aligned_cols=130 Identities=16% Similarity=0.185 Sum_probs=83.1
Q ss_pred CccceEeecccccccccccchhhhhhHHHH--HhhhcCccccCCEEEEEcC---ChhHHHHHHHHHhCC-CEEEEEcCCc
Q psy15208 770 LSFPAINVNDSVTKSKFDNLYGCRESLIDG--IKRATDVMIAGKIAVIIGY---GDVGKGSAQAMRALS-AQVWIIEIDP 843 (1027)
Q Consensus 770 l~~Pv~~vnds~~K~~~dn~~g~~~s~~~~--i~r~t~~~l~Gk~VvViG~---G~IG~~vA~~a~~~G-a~ViV~d~dp 843 (1027)
-.+||||.=++..-| .-|.+.|- +.+..+ .+.|++|+.+|- +++-...+..+..+| ++|.++-...
T Consensus 120 ~~vPVINAg~~~~~H-------P~Q~LaD~~Ti~e~~g-~l~~~~i~~vGD~~~~~v~~S~~~~~~~~~~~~~~i~~P~~ 191 (310)
T d1tuga1 120 GNVPVLNAGDGSNQH-------PTQTLLDLFTIQETQG-RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDA 191 (310)
T ss_dssp TTSCEEEEEETTSCC-------HHHHHHHHHHHHHHHS-CSSSCEEEEESCTTTCHHHHHHHHHHTTSSSCEEEEECCGG
T ss_pred cCccEEECCCCcccc-------hHHHHHHHHHHHHHcC-CcccceEEEEeccccCcchHHHHHHHHhccCceEEEeCCcc
Confidence 368999864432222 12444333 333334 489999999997 678888888888886 5888874322
Q ss_pred h-----hHHHHhhcCcE---EcCHHHHhccCCEEEecCCC--------------cccCcHHHHhcCCCCeEEEEecCCCc
Q psy15208 844 I-----CALQAAMEGFL---VVTMEYAKKYGDIFVTCTGN--------------YHVITHDHMRDMKDQAIVCNIGHFDN 901 (1027)
Q Consensus 844 ~-----r~~~A~~~G~~---v~~~~e~l~~aDvvi~atG~--------------~~vi~~~~~~~mk~gailvNvG~~d~ 901 (1027)
. -...+...|.. ..++++++..+|+|.+.... .-.++.+.++.+++++++..++.-+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~aDvvy~~~~~~e~~~~~~~~~~~~~~~v~~~~l~~a~~~~i~MHcLPRg~ 271 (310)
T d1tuga1 192 LAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVD 271 (310)
T ss_dssp GCCCHHHHHHHHTTTCCEEEESCGGGTTTTCSEEEECCCCGGGSCHHHHHTTTTSSCBCGGGGTTSCSSCEEECCSCCSS
T ss_pred cccchhcccccccccceeeeeechhhhccCCceeeecccchhhhcccchhhhhhhhhhhHHHHhcCCCCcEEeeCCCCCC
Confidence 1 22234444543 35789999999999864321 12466666777888888887776556
Q ss_pred ccchhh
Q psy15208 902 EIEVEK 907 (1027)
Q Consensus 902 eid~~~ 907 (1027)
||+-+.
T Consensus 272 EIt~eV 277 (310)
T d1tuga1 272 EIATDV 277 (310)
T ss_dssp SBCGGG
T ss_pred EecHhh
Confidence 666553
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=91.91 E-value=0.067 Score=54.76 Aligned_cols=37 Identities=30% Similarity=0.397 Sum_probs=32.6
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
.|.||+|+|.|.+. ||+.+|+.|...|++|+++..+.
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~ 40 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSS 40 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCC
Confidence 47999999999888 99999999999999999865443
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=91.83 E-value=0.18 Score=48.40 Aligned_cols=66 Identities=14% Similarity=-0.036 Sum_probs=44.3
Q ss_pred CCEEEEEcCChhHHH--HHHHHHhC----CCEEEEEcCCchhHHH--------HhhcC--cE---EcCHHHHhccCCEEE
Q psy15208 810 GKIAVIIGYGDVGKG--SAQAMRAL----SAQVWIIEIDPICALQ--------AAMEG--FL---VVTMEYAKKYGDIFV 870 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~--vA~~a~~~----Ga~ViV~d~dp~r~~~--------A~~~G--~~---v~~~~e~l~~aDvvi 870 (1027)
.-+|+|+|+|.+|.. +...++.. +.+++.+|+|+.++.. +...+ .. ..+..++++.||+||
T Consensus 3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~Vv 82 (167)
T d1u8xx1 3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 82 (167)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEEE
Confidence 347999999998753 23333322 2379999999987542 11122 22 336789999999999
Q ss_pred ecCCC
Q psy15208 871 TCTGN 875 (1027)
Q Consensus 871 ~atG~ 875 (1027)
.+.|.
T Consensus 83 itag~ 87 (167)
T d1u8xx1 83 AHIRV 87 (167)
T ss_dssp ECCCT
T ss_pred ECCCc
Confidence 99875
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=91.57 E-value=0.054 Score=51.50 Aligned_cols=35 Identities=29% Similarity=0.217 Sum_probs=30.6
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
++++|+|+|.|++|..+|..++.+|.+|.++++.+
T Consensus 2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~~~~ 36 (185)
T d1q1ra1 2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGD 36 (185)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHcCCceEEEEecC
Confidence 57899999999999999999999999877765544
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=91.53 E-value=0.16 Score=47.61 Aligned_cols=65 Identities=15% Similarity=0.209 Sum_probs=43.4
Q ss_pred EEEEEc-CChhHHHHHHHHH-h--CCCEEEEEcCCchhHHHHhh--cC---cE---E--cCHHHHhccCCEEEecCCCc
Q psy15208 812 IAVIIG-YGDVGKGSAQAMR-A--LSAQVWIIEIDPICALQAAM--EG---FL---V--VTMEYAKKYGDIFVTCTGNY 876 (1027)
Q Consensus 812 ~VvViG-~G~IG~~vA~~a~-~--~Ga~ViV~d~dp~r~~~A~~--~G---~~---v--~~~~e~l~~aDvvi~atG~~ 876 (1027)
+|.|+| .|.||..+|..++ . ++-++..+|+++...-++.. +. .. + .+..++++.+|+||.+.|.+
T Consensus 2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDvvvitaG~~ 80 (145)
T d2cmda1 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVR 80 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSEEEECCSCC
T ss_pred EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCccccCCCCEEEECCCcc
Confidence 689999 5999999998764 3 34589999998744333221 11 11 1 12345678899999887754
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=91.49 E-value=0.088 Score=54.44 Aligned_cols=41 Identities=17% Similarity=0.143 Sum_probs=32.1
Q ss_pred chHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhc
Q psy15208 88 GETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRL 128 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~ 128 (1027)
....++...++.+...++..++++.|||+||++|..+|...
T Consensus 114 ~~~~~i~~~v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~l 154 (265)
T d1lgya_ 114 QVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 154 (265)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCceEEEEecccchHHHHHHHHHH
Confidence 44556666666666778888999999999999998888653
|
| >d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Probab=91.48 E-value=0.37 Score=45.26 Aligned_cols=101 Identities=12% Similarity=0.043 Sum_probs=70.9
Q ss_pred ccCCEEEEEcC---ChhHHHHHHHHHhCCCEEEEEcCCc---hhHHHHhhcCcE---EcCHHHHhccCCEEEecC-C---
Q psy15208 808 IAGKIAVIIGY---GDVGKGSAQAMRALSAQVWIIEIDP---ICALQAAMEGFL---VVTMEYAKKYGDIFVTCT-G--- 874 (1027)
Q Consensus 808 l~Gk~VvViG~---G~IG~~vA~~a~~~Ga~ViV~d~dp---~r~~~A~~~G~~---v~~~~e~l~~aDvvi~at-G--- 874 (1027)
|.|.+|+++|= +++.+..+..+..+|++++++=..+ .........|.. +.++++++..+|+|.+.. .
T Consensus 1 l~gl~i~~vGD~~~sRv~~Sl~~~l~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~d~~eai~~aDvvy~~~~q~~~ 80 (153)
T d1pg5a2 1 IDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKER 80 (153)
T ss_dssp STTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTT
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHHHcCCeeEEEecccccccchhhcccCCCeEEEEeCHHHHhhcCCeEEEeeeeehh
Confidence 46999999996 4589999999999999865542211 112222333433 347899999999987531 1
Q ss_pred -----------CcccCcHHHHhcCCCCeEEEEecCCCcccchhhh
Q psy15208 875 -----------NYHVITHDHMRDMKDQAIVCNIGHFDNEIEVEKL 908 (1027)
Q Consensus 875 -----------~~~vi~~~~~~~mk~gailvNvG~~d~eid~~~l 908 (1027)
..--++.+.++.+++++++...+.-..||+.+..
T Consensus 81 ~~~~~~~~~~~~~y~v~~~~l~~~~~~~i~mH~LPR~~EI~~~v~ 125 (153)
T d1pg5a2 81 FVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPLPRVNEIDRKVD 125 (153)
T ss_dssp SSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCSCCSSSBCGGGG
T ss_pred ccchhHHHHHHHhhhhhHHHHhccCCCeEEecCCCCcCCcchhhc
Confidence 1124788888999999999988887777776643
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=91.06 E-value=0.3 Score=46.76 Aligned_cols=65 Identities=14% Similarity=0.102 Sum_probs=42.5
Q ss_pred EEEEEcCChhHH--HHHHHHHhC---C-CEEEEEcCCchhHH-HH---------hhcCcE-----EcCHHHHhccCCEEE
Q psy15208 812 IAVIIGYGDVGK--GSAQAMRAL---S-AQVWIIEIDPICAL-QA---------AMEGFL-----VVTMEYAKKYGDIFV 870 (1027)
Q Consensus 812 ~VvViG~G~IG~--~vA~~a~~~---G-a~ViV~d~dp~r~~-~A---------~~~G~~-----v~~~~e~l~~aDvvi 870 (1027)
++.|+|+|.+|- .++..++.. . .++..+|+++.++. ++ ...+.. ..+..++++.+|+||
T Consensus 3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDvVv 82 (169)
T d1s6ya1 3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFVT 82 (169)
T ss_dssp EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCEEE
Confidence 789999998764 444455443 2 37999999875421 11 112222 345788899999999
Q ss_pred ecCCCc
Q psy15208 871 TCTGNY 876 (1027)
Q Consensus 871 ~atG~~ 876 (1027)
.+.|..
T Consensus 83 ~ta~~~ 88 (169)
T d1s6ya1 83 TQFRVG 88 (169)
T ss_dssp ECCCTT
T ss_pred EccccC
Confidence 988753
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.03 E-value=0.088 Score=53.11 Aligned_cols=35 Identities=23% Similarity=0.373 Sum_probs=32.0
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
.-++|+|||.|.-|+.+|..|+..|.+|+|+|.++
T Consensus 4 ~~~kViVIGaG~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 4 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 34679999999999999999999999999998865
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=90.98 E-value=0.067 Score=51.79 Aligned_cols=32 Identities=19% Similarity=0.368 Sum_probs=29.4
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDP 843 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp 843 (1027)
+|+|||.|+.|..+|..|+..|. +|+|+|.++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 48999999999999999999997 699999865
|
| >d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Thermotoga maritima [TaxId: 2336]
Probab=90.97 E-value=0.93 Score=42.52 Aligned_cols=102 Identities=15% Similarity=0.055 Sum_probs=69.5
Q ss_pred ccCCEEEEEcCC--hhHHHHHHHHHhCCCEEEEEcCCch---h--H----HHHhhcCcE---EcCHHHHhccCCEEEecC
Q psy15208 808 IAGKIAVIIGYG--DVGKGSAQAMRALSAQVWIIEIDPI---C--A----LQAAMEGFL---VVTMEYAKKYGDIFVTCT 873 (1027)
Q Consensus 808 l~Gk~VvViG~G--~IG~~vA~~a~~~Ga~ViV~d~dp~---r--~----~~A~~~G~~---v~~~~e~l~~aDvvi~at 873 (1027)
|.|++|+.+|=| ++-+..+..+..+|+++.++-+... . . ..+...+.. ..++++++..+|+|.+..
T Consensus 1 l~g~ki~~vGD~~nnV~~Sli~~~~~~g~~i~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~ai~~aDviyt~~ 80 (161)
T d1vlva2 1 LKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDV 80 (161)
T ss_dssp STTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCEEEEEcCCccHHHHHHHHHHHHcCCEEEEecchhhhhhhhHHHHHHHHHhhcCCceEEEecHHHhhhhhhheeccc
Confidence 579999999954 6999999999999999998833221 1 1 113334433 347899999999998743
Q ss_pred C-------C----------cccCcHHHHhcCCCCeEEEEecCC--Ccccchhhhh
Q psy15208 874 G-------N----------YHVITHDHMRDMKDQAIVCNIGHF--DNEIEVEKLK 909 (1027)
Q Consensus 874 G-------~----------~~vi~~~~~~~mk~gailvNvG~~--d~eid~~~l~ 909 (1027)
= . ..+.+......+|+.+++.-.+.. +.||+-+.+.
T Consensus 81 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~MH~lP~~r~~Eis~~v~d 135 (161)
T d1vlva2 81 WASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVTYEVIE 135 (161)
T ss_dssp CC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCBTTTBCHHHHT
T ss_pred eeeecccccchhhhccccceeeeehhhhcccCCCeeEecCCCcccccccchhhhc
Confidence 1 1 113333334457899999999884 5677766443
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=90.94 E-value=0.12 Score=48.37 Aligned_cols=38 Identities=18% Similarity=0.099 Sum_probs=34.4
Q ss_pred cccCCEEEEE--cCChhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 807 MIAGKIAVII--GYGDVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 807 ~l~Gk~VvVi--G~G~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
...++.|+|+ |.|.||..+|..++.+|++|++++..+.
T Consensus 36 ~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 36 KKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp SCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred cccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 4679999998 8899999999999999999999988763
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=90.94 E-value=0.058 Score=52.12 Aligned_cols=35 Identities=20% Similarity=0.108 Sum_probs=32.0
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
.++.|+|||.|+.|..+|..|+.+|++|+++|..+
T Consensus 4 k~~dVvIIGGGpaGl~AA~~~ar~g~~v~iie~~~ 38 (190)
T d1trba1 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGME 38 (190)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEEeec
Confidence 56799999999999999999999999999998654
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=90.90 E-value=0.078 Score=54.11 Aligned_cols=38 Identities=16% Similarity=0.026 Sum_probs=33.5
Q ss_pred EEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHHHH
Q psy15208 812 IAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICALQA 849 (1027)
Q Consensus 812 ~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A 849 (1027)
|++|.|.+. ||+++|+.|...|++|++++++..++.+.
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~ 40 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL 40 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 799999998 99999999999999999999887655443
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=90.88 E-value=0.088 Score=54.64 Aligned_cols=42 Identities=21% Similarity=0.296 Sum_probs=33.1
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHhc
Q psy15208 87 NGETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKRL 128 (1027)
Q Consensus 87 ~~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~~ 128 (1027)
.....++...++.+...++..++++.|||+||++|..++...
T Consensus 117 ~~~~~~i~~~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~l 158 (271)
T d1tiaa_ 117 KLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATDL 158 (271)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEeccchHHHHHHHHHHHH
Confidence 345556666667677777878899999999999999988764
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=90.81 E-value=0.083 Score=51.82 Aligned_cols=31 Identities=23% Similarity=0.246 Sum_probs=29.4
Q ss_pred EEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 813 AVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 813 VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
|+|||.|+.|..+|..|+.+|.+|+++|.++
T Consensus 5 vvVIG~G~aG~~aA~~a~~~G~kV~iiE~~~ 35 (217)
T d1gesa1 5 YIAIGGGSGGIASINRAAMYGQKCALIEAKE 35 (217)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeccC
Confidence 8999999999999999999999999999864
|
| >d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Mitochondrial NAD(P)-dependent malic enzyme species: Domestic pigeon (Columba livia) [TaxId: 8932]
Probab=90.81 E-value=0.17 Score=53.02 Aligned_cols=97 Identities=13% Similarity=0.225 Sum_probs=65.8
Q ss_pred hhcCccccCCEEEEEcCChhHHHHHHHHHhC----C------C-EEEEEcCCch-----------hHHHHhhcCcEEcCH
Q psy15208 802 RATDVMIAGKIAVIIGYGDVGKGSAQAMRAL----S------A-QVWIIEIDPI-----------CALQAAMEGFLVVTM 859 (1027)
Q Consensus 802 r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~----G------a-~ViV~d~dp~-----------r~~~A~~~G~~v~~~ 859 (1027)
+.++..|...++||.|+|.-|.++|..+... | . +++++|..-. +...+. ..-+..++
T Consensus 17 ki~gk~l~d~kiV~~GAGsAg~gia~~l~~~~~~~G~~~~~a~~~i~l~D~kGlv~~~R~~l~~~k~~~a~-~~~~~~~l 95 (298)
T d1gq2a1 17 RITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAH-EHCEMKNL 95 (298)
T ss_dssp HHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCB-SCCCCCCH
T ss_pred HHhCCCHHHcEEEEECccHHHHHHHHHHHHHHHHcCCChhhccceEEEEeCCCcccCCCcccCHHHHHHHH-Hhhhhhhh
Confidence 3567789999999999999999998888644 2 2 6888876531 111111 11123356
Q ss_pred HHHhc--cCCEEEecCCCcccCcHHHHh---cCCCCeEEEEecCC
Q psy15208 860 EYAKK--YGDIFVTCTGNYHVITHDHMR---DMKDQAIVCNIGHF 899 (1027)
Q Consensus 860 ~e~l~--~aDvvi~atG~~~vi~~~~~~---~mk~gailvNvG~~ 899 (1027)
.++++ ..++++-+++..++++++.++ .|.+.-++.-.+-.
T Consensus 96 ~~~i~~vkptvliG~s~~~g~ft~evv~~ma~~~~~PIIFaLSNP 140 (298)
T d1gq2a1 96 EDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNP 140 (298)
T ss_dssp HHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSS
T ss_pred HHHhhccChheeEecccccCcCCHHHHHHHHhhCCCCEEEEccCC
Confidence 66665 478999998888999998776 45577777655544
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=90.70 E-value=0.25 Score=50.04 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=27.8
Q ss_pred CEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 811 KIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 811 k~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
+.|+|.|.+. ||+.+|+.+...|++|++.+.+.
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~ 35 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARS 35 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4678888777 99999999999999999876543
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=90.67 E-value=0.13 Score=48.15 Aligned_cols=66 Identities=18% Similarity=0.155 Sum_probs=42.5
Q ss_pred CEEEEEc-CChhHHHHHHHHHhCCC--EEEEEcCCchh-HHH--Hhhc----Cc----EE-cCHHHHhccCCEEEecCCC
Q psy15208 811 KIAVIIG-YGDVGKGSAQAMRALSA--QVWIIEIDPIC-ALQ--AAME----GF----LV-VTMEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 811 k~VvViG-~G~IG~~vA~~a~~~Ga--~ViV~d~dp~r-~~~--A~~~----G~----~v-~~~~e~l~~aDvvi~atG~ 875 (1027)
.+|.|+| .|.||..+|..+...|. ++..+|++... ..+ +... .+ .+ ..-.+.++.+|+|+-+.|.
T Consensus 1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~~~~aDiVvitaG~ 80 (142)
T d1o6za1 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGI 80 (142)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHHhhhcCEEEEeccc
Confidence 3799999 69999999999998886 78899975421 111 1110 11 11 1223456778888877664
Q ss_pred c
Q psy15208 876 Y 876 (1027)
Q Consensus 876 ~ 876 (1027)
+
T Consensus 81 ~ 81 (142)
T d1o6za1 81 P 81 (142)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=90.63 E-value=0.072 Score=53.17 Aligned_cols=32 Identities=19% Similarity=0.302 Sum_probs=30.2
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
+|+|||.|.-|..+|..|+..|.+|+|+|.++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 2 NVAVVGGGISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 59999999999999999999999999999865
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=90.57 E-value=0.12 Score=53.28 Aligned_cols=40 Identities=15% Similarity=0.174 Sum_probs=30.9
Q ss_pred chHHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHHh
Q psy15208 88 GETDDMEILLRYIQKKYPYLPIILAGFSFGTFVQAKLQKR 127 (1027)
Q Consensus 88 ~~~~Dv~avl~~L~~~~~~~pviLVGhSmGG~vAl~~A~~ 127 (1027)
....++...+..+..+++..++++.|||+||++|..++..
T Consensus 113 ~v~~~i~~~i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 113 EVQNELVATVLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 3455555566666667788899999999999999998765
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=90.16 E-value=0.12 Score=54.54 Aligned_cols=34 Identities=26% Similarity=0.304 Sum_probs=32.2
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
.|+|+|||+|..|..+|..|+..|.+|+|+|.++
T Consensus 2 ~KKI~IIGaG~sGL~aA~~L~k~G~~V~viEk~~ 35 (314)
T d2bi7a1 2 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD 35 (314)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCCEEEEECCC
Confidence 5899999999999999999999999999999876
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=90.15 E-value=0.17 Score=50.60 Aligned_cols=79 Identities=14% Similarity=0.027 Sum_probs=52.4
Q ss_pred EEEEEcCChhHHH-HHHHHHhC-CCEEE-EEcCCchhHHHH-hhcCcE------EcCHHHHhc--cCCEEEecCCCcccC
Q psy15208 812 IAVIIGYGDVGKG-SAQAMRAL-SAQVW-IIEIDPICALQA-AMEGFL------VVTMEYAKK--YGDIFVTCTGNYHVI 879 (1027)
Q Consensus 812 ~VvViG~G~IG~~-vA~~a~~~-Ga~Vi-V~d~dp~r~~~A-~~~G~~------v~~~~e~l~--~aDvvi~atG~~~vi 879 (1027)
+|+|||+|.+|+. ++..++.. +++|+ |+|+++.++... ...|+. ..+.++++. +.|+|+.+|.+.. -
T Consensus 35 riaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~~ell~~~~iD~V~I~tp~~~-H 113 (221)
T d1h6da1 35 GYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSL-H 113 (221)
T ss_dssp EEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGG-H
T ss_pred EEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCchhhhcccccceeeeeccchhh-h
Confidence 8999999999974 55555554 66755 789999887653 344543 346788775 5799988886542 1
Q ss_pred cHHHHhcCCCCe
Q psy15208 880 THDHMRDMKDQA 891 (1027)
Q Consensus 880 ~~~~~~~mk~ga 891 (1027)
..-....|+.|-
T Consensus 114 ~~~~~~al~~gk 125 (221)
T d1h6da1 114 AEFAIRAFKAGK 125 (221)
T ss_dssp HHHHHHHHHTTC
T ss_pred hhHHHHhhhcch
Confidence 222345566653
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.09 E-value=0.083 Score=54.03 Aligned_cols=33 Identities=24% Similarity=0.199 Sum_probs=31.1
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
+|+|+|+|+.|..+|..|+..|.+|+|+|..|.
T Consensus 4 ~V~IvGaGp~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 599999999999999999999999999999874
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.08 E-value=0.11 Score=52.98 Aligned_cols=42 Identities=12% Similarity=0.134 Sum_probs=36.1
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHh---CCCEEEEEcCCchhHHH
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRA---LSAQVWIIEIDPICALQ 848 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~---~Ga~ViV~d~dp~r~~~ 848 (1027)
.|.||+++|.|.+. ||+++|+.|+. .|++|+++++++.++.+
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~ 48 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQ 48 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHH
Confidence 37899999999987 99999999874 69999999998866554
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=90.04 E-value=0.38 Score=41.71 Aligned_cols=69 Identities=17% Similarity=0.102 Sum_probs=50.2
Q ss_pred cccCCEEEEEcCChhHHHH-HHHHHhCCCEEEEEcCCch-hHHHHhhcCcEEcC--HHHHhccCCEEEecCCC
Q psy15208 807 MIAGKIAVIIGYGDVGKGS-AQAMRALSAQVWIIEIDPI-CALQAAMEGFLVVT--MEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~v-A~~a~~~Ga~ViV~d~dp~-r~~~A~~~G~~v~~--~~e~l~~aDvvi~atG~ 875 (1027)
+-..|++-++|-|.+|++. |+.|+..|..|..+|.... ........|+.+.. ..+.+...|+||-.++-
T Consensus 5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~i~~~d~vV~S~AI 77 (96)
T d1p3da1 5 MRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHIEGASVVVVSSAI 77 (96)
T ss_dssp CTTCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGGGGTTCSEEEECTTS
T ss_pred chhCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCccccCCCCCEEEECCCc
Confidence 3467999999999999655 9999999999999997542 22234456877542 34446778988866543
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=89.96 E-value=0.31 Score=46.78 Aligned_cols=65 Identities=18% Similarity=0.061 Sum_probs=47.6
Q ss_pred EEEEEcCChhHHH-HHHHHHhCC--CEEE-EEcCCchhHHH-HhhcCcE--EcCHHHHhc--cCCEEEecCCCc
Q psy15208 812 IAVIIGYGDVGKG-SAQAMRALS--AQVW-IIEIDPICALQ-AAMEGFL--VVTMEYAKK--YGDIFVTCTGNY 876 (1027)
Q Consensus 812 ~VvViG~G~IG~~-vA~~a~~~G--a~Vi-V~d~dp~r~~~-A~~~G~~--v~~~~e~l~--~aDvvi~atG~~ 876 (1027)
+|+|+|+|.+|+. .+..++..+ .+|+ |+|.++.++.. +...+.. ..+.++++. +.|+|+.+|.+.
T Consensus 5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~~~ell~~~~id~v~I~tp~~ 78 (181)
T d1zh8a1 5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVE 78 (181)
T ss_dssp EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGG
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceeeeeeccccccccceeecccccc
Confidence 7899999999987 477777754 3544 78999977665 3444543 467888875 579898888654
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=89.91 E-value=0.093 Score=51.68 Aligned_cols=32 Identities=25% Similarity=0.215 Sum_probs=29.9
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
.++|||.|+.|..+|..|+.+|.+|+++|.++
T Consensus 7 DlvVIG~GpaGl~aA~~aa~~G~~V~liE~~~ 38 (220)
T d1lvla1 7 TLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQA 38 (220)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 58999999999999999999999999999764
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.84 E-value=0.11 Score=49.90 Aligned_cols=31 Identities=13% Similarity=0.118 Sum_probs=29.8
Q ss_pred EEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 813 AVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 813 VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
|+|||.|.-|..+|..|+..|-+|+|+|.++
T Consensus 8 viViGaG~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLGTGITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 8999999999999999999999999999976
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=89.82 E-value=0.11 Score=51.63 Aligned_cols=35 Identities=20% Similarity=0.382 Sum_probs=31.8
Q ss_pred CCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 810 GKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 810 Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
.|+++|.|.+. ||+++|+.|...|++|+++++++.
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~ 36 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE 36 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence 48999999966 999999999999999999998764
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=89.74 E-value=0.26 Score=48.86 Aligned_cols=98 Identities=18% Similarity=0.122 Sum_probs=63.7
Q ss_pred hHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCC--CEEEEEcCCchhHHHHhh----cCcE---E--cCHHHHh
Q psy15208 795 SLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALS--AQVWIIEIDPICALQAAM----EGFL---V--VTMEYAK 863 (1027)
Q Consensus 795 s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~G--a~ViV~d~dp~r~~~A~~----~G~~---v--~~~~e~l 863 (1027)
+.+..+....++ -.|.+|+-+|+|. |...+..++..| .+|+.+|.++.....|.. .+.. + .+..+..
T Consensus 62 ~~~a~~l~~l~l-~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~ 139 (213)
T d1dl5a1 62 SLMALFMEWVGL-DKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV 139 (213)
T ss_dssp HHHHHHHHHTTC-CTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC
T ss_pred hhhHHHHHhhhc-cccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc
Confidence 444445555553 5899999999999 666666665544 589999999976555443 2322 1 1233322
Q ss_pred ---ccCCEEEecCCCcccCcHHHHhcCCCCeEEEE
Q psy15208 864 ---KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCN 895 (1027)
Q Consensus 864 ---~~aDvvi~atG~~~vi~~~~~~~mk~gailvN 895 (1027)
...|+|+.+.+..+ +..+.+++||+||+++-
T Consensus 140 ~~~~~fD~I~~~~~~~~-~p~~l~~~LkpGG~lv~ 173 (213)
T d1dl5a1 140 PEFSPYDVIFVTVGVDE-VPETWFTQLKEGGRVIV 173 (213)
T ss_dssp GGGCCEEEEEECSBBSC-CCHHHHHHEEEEEEEEE
T ss_pred ccccchhhhhhhccHHH-hHHHHHHhcCCCcEEEE
Confidence 23698876654455 45567899999999875
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=89.61 E-value=0.42 Score=40.90 Aligned_cols=65 Identities=12% Similarity=0.054 Sum_probs=46.9
Q ss_pred CEEEEEcCChhHH-HHHHHHHhCCCEEEEEcCCchhH-HHHhhcCcEEcC--HHHHhccCCEEEecCCC
Q psy15208 811 KIAVIIGYGDVGK-GSAQAMRALSAQVWIIEIDPICA-LQAAMEGFLVVT--MEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 811 k~VvViG~G~IG~-~vA~~a~~~Ga~ViV~d~dp~r~-~~A~~~G~~v~~--~~e~l~~aDvvi~atG~ 875 (1027)
.+|-++|-|.+|+ ++|+.|+..|..|..+|..+... ..-...|+++.. -.+-+..+|+||-.++-
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~i~~~d~vV~SsAI 70 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSADNWYDPDLVIKTPAV 70 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCTTSCCCCSEEEECTTC
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeecccccCCCCEEEEecCc
Confidence 4678999999997 77999999999999999876322 234456766532 23335678988866543
|
| >d2h1qa1 c.67.3.1 (A:1-251) Hypothetical protein Dhaf_3308 {Desulfitobacterium hafniense [TaxId: 49338]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: Dhaf3308-like family: Dhaf3308-like domain: Hypothetical protein Dhaf 3308 species: Desulfitobacterium hafniense [TaxId: 49338]
Probab=89.52 E-value=0.18 Score=51.53 Aligned_cols=79 Identities=15% Similarity=0.144 Sum_probs=56.7
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCCCc---ccCcHHH
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTGNY---HVITHDH 883 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG~~---~vi~~~~ 883 (1027)
..|++|+|||+-| ....++..|+++.|+|.+|. .|.. -...++.+.+||+||- ||+. +.+. ..
T Consensus 120 ~~g~kV~vIG~~P----~v~~l~~~~~~~~VlE~~p~-------~gd~p~~~~~~lLp~aD~vii-TGsTlvN~Tl~-~L 186 (251)
T d2h1qa1 120 VKGKKVGVVGHFP----HLESLLEPICDLSILEWSPE-------EGDYPLPASEFILPECDYVYI-TCASVVDKTLP-RL 186 (251)
T ss_dssp TTTSEEEEESCCT----THHHHHTTTSEEEEEESSCC-------TTCEEGGGHHHHGGGCSEEEE-ETHHHHHTCHH-HH
T ss_pred cCCCEEEEEecch----hHHHHHhcCCcEEEEeCCCC-------CCCCCchHHHHhhhcCCEEEE-EechhhcCCHH-HH
Confidence 4799999999986 34556788999999999983 2322 2236778899999863 3433 2222 34
Q ss_pred HhcCCCCeEEEEecCC
Q psy15208 884 MRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 884 ~~~mk~gailvNvG~~ 899 (1027)
++..|+...++-+|..
T Consensus 187 L~~~~~a~~vvl~GPS 202 (251)
T d2h1qa1 187 LELSRNARRITLVGPG 202 (251)
T ss_dssp HHHTTTSSEEEEESTT
T ss_pred HHhCCcCCEEEEECCC
Confidence 6777888899999987
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=89.52 E-value=0.13 Score=48.86 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=29.2
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
-|+|||.|++|..+|..++.+|++|+++|..+
T Consensus 3 DViIIGgGpaGl~AAi~aar~G~~v~iie~~~ 34 (184)
T d1fl2a1 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERF 34 (184)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSST
T ss_pred cEEEECcCHHHHHHHHHHHHcCCeEEEEEEec
Confidence 48999999999999999999999999998643
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=89.39 E-value=0.11 Score=50.95 Aligned_cols=31 Identities=32% Similarity=0.219 Sum_probs=29.1
Q ss_pred EEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 813 AVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 813 VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
|+|||.|+.|..+|..++.+|.+|+++|..+
T Consensus 6 vvVIGgGpaGl~aA~~aa~~G~kV~vie~~~ 36 (221)
T d1dxla1 6 VVIIGGGPGGYVAAIKAAQLGFKTTCIEKRG 36 (221)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred EEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 8999999999999999999999999998754
|
| >d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Bacillus subtilis [TaxId: 1423]
Probab=89.20 E-value=0.3 Score=45.99 Aligned_cols=97 Identities=21% Similarity=0.188 Sum_probs=68.1
Q ss_pred cCCEEEEEcC---ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcE-EcCHHHHhccCCEEEecCC-------C--
Q psy15208 809 AGKIAVIIGY---GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFL-VVTMEYAKKYGDIFVTCTG-------N-- 875 (1027)
Q Consensus 809 ~Gk~VvViG~---G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~~~e~l~~aDvvi~atG-------~-- 875 (1027)
.|.+|+++|= +++.+..+..+..+|++|.++-+..... ....+. ..++++++..+|+|.+..- .
T Consensus 2 ~gl~i~~vGD~~~srv~~Sl~~~~~~~g~~~~i~~P~~~~~---~~~~~~~~~~~~ea~~~aDviy~~r~q~e~~~~~~~ 78 (151)
T d2at2a2 2 KGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQD---EENTFGTYVSMDEAVESSDVVMLLRIQNERHQSAVS 78 (151)
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHcCCcccccCCchhhc---cccceeEEEechhccccCceeeeeEEEEcccccchh
Confidence 5889999996 6799999999999999998884433222 123333 4578999999999876321 0
Q ss_pred ------cccCcHHHHhcCCCCeEEEEecCC--Ccccchhhh
Q psy15208 876 ------YHVITHDHMRDMKDQAIVCNIGHF--DNEIEVEKL 908 (1027)
Q Consensus 876 ------~~vi~~~~~~~mk~gailvNvG~~--d~eid~~~l 908 (1027)
...++.+.+..+++.+++...+.. +.||+-+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~i~MH~LP~~Rg~EI~~~V~ 119 (151)
T d2at2a2 79 QEGYLNKYGLTVERAERMKRHAIIMHPAPVNRGVEIDDSLV 119 (151)
T ss_pred hHHhhhhhcchhhhhhhcccCeEEecCCccccCCccchhhh
Confidence 123445557778899999888774 457765533
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=89.16 E-value=0.32 Score=49.67 Aligned_cols=90 Identities=20% Similarity=0.187 Sum_probs=59.4
Q ss_pred cccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH----hhcCcE----EcCHHHHhc--cCCEEEecCCCc
Q psy15208 807 MIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA----AMEGFL----VVTMEYAKK--YGDIFVTCTGNY 876 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A----~~~G~~----v~~~~e~l~--~aDvvi~atG~~ 876 (1027)
...|++|+=+|||. |.. +..++.+|++|+.+|+||.....| ...|+. ..+..+.+. ..|+|+..- ..
T Consensus 118 ~~~g~~VLDiGcGs-G~l-~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~~~~~~~fD~V~ani-~~ 194 (254)
T d2nxca1 118 LRPGDKVLDLGTGS-GVL-AIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANL-YA 194 (254)
T ss_dssp CCTTCEEEEETCTT-SHH-HHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEEC-CH
T ss_pred cCccCEEEEcccch-hHH-HHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccccccccccchhhhcc-cc
Confidence 56899999999997 543 334556899999999999655443 334543 234555543 478887532 22
Q ss_pred cc---CcHHHHhcCCCCeEEEEecCC
Q psy15208 877 HV---ITHDHMRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 877 ~v---i~~~~~~~mk~gailvNvG~~ 899 (1027)
+. +-.+..+.||+||+++..|..
T Consensus 195 ~~l~~l~~~~~~~LkpGG~lilSgil 220 (254)
T d2nxca1 195 ELHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ccHHHHHHHHHHhcCCCcEEEEEecc
Confidence 21 122335679999999988765
|
| >d1ekxa2 c.78.1.1 (A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Escherichia coli [TaxId: 562]
Probab=89.09 E-value=0.68 Score=43.52 Aligned_cols=100 Identities=15% Similarity=0.132 Sum_probs=69.0
Q ss_pred ccCCEEEEEcC---ChhHHHHHHHHHhCCC-EEEEEcCC-----chhHHHHhhcCcE---EcCHHHHhccCCEEEecCCC
Q psy15208 808 IAGKIAVIIGY---GDVGKGSAQAMRALSA-QVWIIEID-----PICALQAAMEGFL---VVTMEYAKKYGDIFVTCTGN 875 (1027)
Q Consensus 808 l~Gk~VvViG~---G~IG~~vA~~a~~~Ga-~ViV~d~d-----p~r~~~A~~~G~~---v~~~~e~l~~aDvvi~atG~ 875 (1027)
+.|.+|+.+|= +++.+..+..+..+|. .++++-.. +.....+...|.. ..++++++.++|+|.+....
T Consensus 2 l~gl~i~~vGD~~nsrv~~Sli~~l~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~aDvvy~~~~~ 81 (160)
T d1ekxa2 2 LDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQ 81 (160)
T ss_dssp SSSCEEEEESCTTTCHHHHHHHHHHTTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCSTTTGGGCSEEEECCCC
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHHHHcCCCeEEeeccchhhhhHHHHHHHhhhccccccccCHHHHhCcCceEEeeccc
Confidence 57999999995 6689999999999976 55665221 1122334455543 34688999999999865321
Q ss_pred --------------cccCcHHHHhcCCCCeEEEEecCCCcccchhh
Q psy15208 876 --------------YHVITHDHMRDMKDQAIVCNIGHFDNEIEVEK 907 (1027)
Q Consensus 876 --------------~~vi~~~~~~~mk~gailvNvG~~d~eid~~~ 907 (1027)
...++.+.++.+++++++...+.-..||+-+.
T Consensus 82 ~e~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~mHcLPRg~EI~~~V 127 (160)
T d1ekxa2 82 KERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIATDV 127 (160)
T ss_dssp GGGCCGGGGGGCSCSCCBCGGGGTTCCTTCEEECCSCCSSSBCGGG
T ss_pred ccccchHHHHHHHHHhhccHHHHHhcCcceeeecCCCcCCccchhh
Confidence 12346666788889999988877666766553
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=88.98 E-value=0.16 Score=50.13 Aligned_cols=33 Identities=27% Similarity=0.222 Sum_probs=29.0
Q ss_pred CEEEEEcCChhHHHHHHHHHh--CCCEEEEEcCCc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRA--LSAQVWIIEIDP 843 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~--~Ga~ViV~d~dp 843 (1027)
.+|+|||.|+.|..+|..|+. +|.+|+|+|..+
T Consensus 2 ~kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~e~~~ 36 (230)
T d1cjca2 2 PQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQL 36 (230)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred CeEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 379999999999999998854 688999999886
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=88.91 E-value=0.5 Score=45.23 Aligned_cols=67 Identities=15% Similarity=0.076 Sum_probs=45.6
Q ss_pred CCEEEEEcCChhHHHHHH---HHH--hC-CCEEEEEcCCchhHHH--------HhhcC--cE---EcCHHHHhccCCEEE
Q psy15208 810 GKIAVIIGYGDVGKGSAQ---AMR--AL-SAQVWIIEIDPICALQ--------AAMEG--FL---VVTMEYAKKYGDIFV 870 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~---~a~--~~-Ga~ViV~d~dp~r~~~--------A~~~G--~~---v~~~~e~l~~aDvvi 870 (1027)
+-++.|+|.|.+|...+. .++ .+ +-+++.+|+|+.++.. ....+ .+ ..+.++++..+|+|+
T Consensus 2 ~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~Vv 81 (171)
T d1obba1 2 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 81 (171)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeEe
Confidence 458999999999965432 332 22 3489999999876542 11122 22 346899999999999
Q ss_pred ecCCCc
Q psy15208 871 TCTGNY 876 (1027)
Q Consensus 871 ~atG~~ 876 (1027)
.+.+..
T Consensus 82 ~~~~~g 87 (171)
T d1obba1 82 NTAMVG 87 (171)
T ss_dssp ECCCTT
T ss_pred eecccc
Confidence 887543
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=88.89 E-value=1.7 Score=47.96 Aligned_cols=63 Identities=19% Similarity=0.135 Sum_probs=40.3
Q ss_pred cEEEEEcCC-CCCCCCCCCC------------CccchHHHHHHHHHHHHHhCC---CCcEEEEEechhHHHHHHHHHhc
Q psy15208 66 YISIRMNFR-GVGASSGTYD------------SGNGETDDMEILLRYIQKKYP---YLPIILAGFSFGTFVQAKLQKRL 128 (1027)
Q Consensus 66 y~Vla~Dlr-GhG~S~g~~~------------~~~~~~~Dv~avl~~L~~~~~---~~pviLVGhSmGG~vAl~~A~~~ 128 (1027)
..++-+|+| |.|.|-.... +....+.|+..+++..-..+| ..+++|.|.|+||..+-.+|...
T Consensus 111 an~lfIDqPvGvGfSy~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i 189 (483)
T d1ac5a_ 111 GDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAI 189 (483)
T ss_dssp SEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCcCeeecCCCCccccccccccCCHHHHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHH
Confidence 578899975 8898853211 112234444444444434444 35799999999999988777653
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=88.89 E-value=0.14 Score=50.94 Aligned_cols=31 Identities=23% Similarity=0.307 Sum_probs=29.6
Q ss_pred EEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 813 AVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 813 VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
|+|||.|+.|..+|..|+..|.+|+++|.++
T Consensus 5 ViIIGaG~aGl~aA~~la~~G~~V~liEk~~ 35 (251)
T d2i0za1 5 VIVIGGGPSGLMAAIGAAEEGANVLLLDKGN 35 (251)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 8999999999999999999999999999875
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=88.81 E-value=0.17 Score=50.50 Aligned_cols=32 Identities=25% Similarity=0.250 Sum_probs=30.0
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDP 843 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp 843 (1027)
+|+|||+|+.|..+|..|+..|. +|+|+|..+
T Consensus 3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~ 35 (288)
T d3c96a1 3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS 35 (288)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 69999999999999999999996 899999876
|
| >d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.79 E-value=0.15 Score=49.85 Aligned_cols=31 Identities=29% Similarity=0.377 Sum_probs=29.3
Q ss_pred EEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 813 AVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 813 VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
|+|||.|+.|..+|..|+.+|.+|+++|.++
T Consensus 6 viIIG~GpaG~~aA~~aar~G~kV~vIEk~~ 36 (221)
T d3grsa1 6 YLVIGGGSGGLASARRAAELGARAAVVESHK 36 (221)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeccC
Confidence 7999999999999999999999999998765
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=88.74 E-value=0.15 Score=51.53 Aligned_cols=32 Identities=25% Similarity=0.262 Sum_probs=30.2
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
.|+|||.|.+|..+|..|+..|.+|+|+|.++
T Consensus 6 DvvIIGaGi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGGGIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 49999999999999999999999999999875
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=88.52 E-value=0.2 Score=44.69 Aligned_cols=35 Identities=26% Similarity=0.124 Sum_probs=29.7
Q ss_pred cCCEEEEEcCChhHHHHHHHHHh---CCCEEEEEcCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRA---LSAQVWIIEIDP 843 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~---~Ga~ViV~d~dp 843 (1027)
..|+++|+|.|.+|..+|..+.. +|.+|++++..+
T Consensus 17 ~p~~v~IiGgG~ig~E~A~~l~~~~~~g~~Vtli~~~~ 54 (117)
T d1feca2 17 APKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD 54 (117)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred cCCeEEEECCChHHHHHHHHhHhhcccccccceecccc
Confidence 35899999999999999987655 488999998765
|
| >d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=88.17 E-value=0.16 Score=50.21 Aligned_cols=32 Identities=22% Similarity=0.351 Sum_probs=29.3
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
-|+|||.|+.|..+|..|+.+|.+|+++|..+
T Consensus 5 DviVIG~GpaGl~aA~~aa~~G~kV~viE~~~ 36 (235)
T d1h6va1 5 DLIIIGGGSGGLAAAKEAAKFDKKVMVLDFVT 36 (235)
T ss_dssp EEEEECCSHHHHHHHHHHGGGCCCEEEECCCC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 38999999999999999999999999999544
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=88.03 E-value=0.15 Score=49.27 Aligned_cols=35 Identities=14% Similarity=0.036 Sum_probs=31.6
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
..++|+|||.|+.|..+|..|+.+|++|+++|..+
T Consensus 4 ~~~~VvIIGgGpaGl~aA~~~ar~g~~v~vie~~~ 38 (192)
T d1vdca1 4 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWM 38 (192)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHcCCcEEEEEeec
Confidence 45899999999999999999999999999998544
|
| >d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=87.88 E-value=0.19 Score=48.96 Aligned_cols=32 Identities=25% Similarity=0.283 Sum_probs=29.6
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
-|+|||.|+.|..+|..|+.+|.+|+++|..+
T Consensus 5 DviVIG~GpaGl~aA~~aar~G~kV~vIEk~~ 36 (223)
T d1ebda1 5 ETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGN 36 (223)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEEecCC
Confidence 38999999999999999999999999998764
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=87.73 E-value=0.19 Score=49.30 Aligned_cols=32 Identities=28% Similarity=0.189 Sum_probs=29.5
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
-|+|||.|+.|..+|..|+.+|.+|+++|..+
T Consensus 7 DviVIG~GpAGl~aA~~aa~~G~kV~lie~~~ 38 (233)
T d1v59a1 7 DVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG 38 (233)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 48999999999999999999999999998754
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=87.54 E-value=0.19 Score=50.54 Aligned_cols=33 Identities=24% Similarity=0.280 Sum_probs=30.7
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
.|+|||.|+.|..+|..|+..|.+|+|+|.++.
T Consensus 6 DViIIGaG~aGl~aA~~la~~G~~V~vlEk~~~ 38 (253)
T d2gqfa1 6 ENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKK 38 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cEEEECcCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 489999999999999999999999999998763
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=87.18 E-value=0.24 Score=51.88 Aligned_cols=33 Identities=36% Similarity=0.351 Sum_probs=29.5
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCC--EEEEEcCCc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSA--QVWIIEIDP 843 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga--~ViV~d~dp 843 (1027)
|+|+|||+|+.|..+|..|+..|. +|+++|...
T Consensus 5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~ 39 (335)
T d2gv8a1 5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG 39 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence 899999999999999999877664 899999875
|
| >d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=86.94 E-value=0.22 Score=49.21 Aligned_cols=32 Identities=28% Similarity=0.210 Sum_probs=29.7
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
-|+|||.||.|..+|..|+.+|.+|+++|..+
T Consensus 8 DviIIG~GPaGlsaA~~aa~~G~~V~viE~~~ 39 (229)
T d1ojta1 8 DVVVLGGGPGGYSAAFAAADEGLKVAIVERYK 39 (229)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 38999999999999999999999999999765
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.49 E-value=0.22 Score=51.11 Aligned_cols=31 Identities=23% Similarity=0.356 Sum_probs=29.0
Q ss_pred EEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 813 AVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 813 VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
|+|||.|..|..+|..|+..|.+|+|+|..+
T Consensus 2 ViVIGaG~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGGGISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEECCBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 8999999999999999999999999998644
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=86.45 E-value=0.19 Score=50.74 Aligned_cols=37 Identities=16% Similarity=0.452 Sum_probs=33.9
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCch
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPI 844 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~ 844 (1027)
|..++|+|+|+|.+|..+|..|...|. +++++|.|..
T Consensus 28 L~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~V 65 (247)
T d1jw9b_ 28 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 65 (247)
T ss_dssp HHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred HhCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCccc
Confidence 688999999999999999999999999 8999987753
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.39 E-value=0.31 Score=44.70 Aligned_cols=35 Identities=34% Similarity=0.313 Sum_probs=30.3
Q ss_pred cCCEEEEEcCChhHHHHHHHH----HhCCCEEEEEcCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAM----RALSAQVWIIEIDP 843 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a----~~~Ga~ViV~d~dp 843 (1027)
.+|+++|+|.|.+|..+|..+ +.+|.+|++++..+
T Consensus 36 ~~k~i~IvGgG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~ 74 (137)
T d1m6ia2 36 EVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEK 74 (137)
T ss_dssp HCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence 579999999999999888776 56899999998765
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=86.34 E-value=0.78 Score=45.76 Aligned_cols=66 Identities=20% Similarity=0.290 Sum_probs=46.9
Q ss_pred CEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhH---------HHHhhcCcEEcC--------HHHHhccCCEEEec
Q psy15208 811 KIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICA---------LQAAMEGFLVVT--------MEYAKKYGDIFVTC 872 (1027)
Q Consensus 811 k~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~---------~~A~~~G~~v~~--------~~e~l~~aDvvi~a 872 (1027)
|+|+|+|+ |.||+.+++.|...|.+|+++++++... ......+++++. ..+.+..+|.++.+
T Consensus 4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~~ 83 (307)
T d1qyca_ 4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIST 83 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeeec
Confidence 78999997 8999999999999999999998765321 111234555432 33455678888877
Q ss_pred CCCc
Q psy15208 873 TGNY 876 (1027)
Q Consensus 873 tG~~ 876 (1027)
.+..
T Consensus 84 ~~~~ 87 (307)
T d1qyca_ 84 VGSL 87 (307)
T ss_dssp CCGG
T ss_pred cccc
Confidence 6544
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=86.31 E-value=0.24 Score=51.07 Aligned_cols=33 Identities=30% Similarity=0.487 Sum_probs=30.7
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
-|+|||.|..|..+|..|+..|++|+++|..+.
T Consensus 18 DVlVIG~G~aGl~aA~~la~~G~~V~lvEK~~~ 50 (308)
T d1y0pa2 18 DVVVVGSGGAGFSAAISATDSGAKVILIEKEPV 50 (308)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 489999999999999999999999999998764
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=86.20 E-value=0.3 Score=49.00 Aligned_cols=33 Identities=27% Similarity=0.407 Sum_probs=29.9
Q ss_pred CEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 811 KIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 811 k~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
|.|+|.|.+. ||+++|+.|...|++|++++++.
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~ 35 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD 35 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence 6789999866 99999999999999999998865
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=86.10 E-value=0.65 Score=46.62 Aligned_cols=40 Identities=18% Similarity=0.143 Sum_probs=33.7
Q ss_pred cCCEEEEEcCCh-hHHHHHHHHHhCCC--EEEEEcCCchhHHH
Q psy15208 809 AGKIAVIIGYGD-VGKGSAQAMRALSA--QVWIIEIDPICALQ 848 (1027)
Q Consensus 809 ~Gk~VvViG~G~-IG~~vA~~a~~~Ga--~ViV~d~dp~r~~~ 848 (1027)
..|+|+|.|... ||+++|+.|...|+ +|+.+.++..++.+
T Consensus 2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~ 44 (250)
T d1yo6a1 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE 44 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHH
Confidence 459999999988 99999999999997 67778888766554
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=85.97 E-value=0.42 Score=44.95 Aligned_cols=35 Identities=17% Similarity=0.257 Sum_probs=30.0
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCCCE-EEEEcCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALSAQ-VWIIEIDP 843 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~Ga~-ViV~d~dp 843 (1027)
.+++|+|||.|.+|.-+|..+..+||+ |+++.+.+
T Consensus 44 ~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 44 IRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 578899999999999999999999994 77775543
|
| >d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.95 E-value=1.9 Score=40.62 Aligned_cols=100 Identities=13% Similarity=0.017 Sum_probs=69.6
Q ss_pred cccCCEEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchh---H------HHHhhcCcE---EcCHHHHhccCCEEEecC
Q psy15208 807 MIAGKIAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPIC---A------LQAAMEGFL---VVTMEYAKKYGDIFVTCT 873 (1027)
Q Consensus 807 ~l~Gk~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r---~------~~A~~~G~~---v~~~~e~l~~aDvvi~at 873 (1027)
+|.|++|+++|-|. +-...+..+..+|+++.++-..... . ..+...|.. ..++++++..+|++.+.+
T Consensus 1 sl~gl~I~~vGD~~nV~~Sli~~~~~~g~~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~i~~~~d~~~~~~~advi~~~~ 80 (170)
T d1otha2 1 SLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDT 80 (170)
T ss_dssp CCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEEcCchhHHHHHHHHHHHcCCEEEEEeccccCCchHHHHHHHHHHhccCCEEEEEcCHHHHHhhhhheeeec
Confidence 36899999999876 6667777788899999888443211 0 113333432 457899999999998754
Q ss_pred C----------------CcccCcHHHHhcCCCCeEEEEecCCC-cccchh
Q psy15208 874 G----------------NYHVITHDHMRDMKDQAIVCNIGHFD-NEIEVE 906 (1027)
Q Consensus 874 G----------------~~~vi~~~~~~~mk~gailvNvG~~d-~eid~~ 906 (1027)
- ....++.+.++.+++++++...+.-. .|++-+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~MHplP~~~~ei~~~ 130 (170)
T d1otha2 81 WISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCLPRKPEEVDDE 130 (170)
T ss_dssp SSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECSCCCTTTBCHH
T ss_pred eecccchhhhHHHHHHHhhhhhhhhhhhccCCceEEecCCCccCcccchh
Confidence 1 12346777789999999999888864 355433
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=85.76 E-value=0.79 Score=43.98 Aligned_cols=63 Identities=14% Similarity=0.033 Sum_probs=42.5
Q ss_pred CEEEEEc-CChhHHHHHHHHHhCCCEEEE--EcCCchhHHHHhhcCcEE-----c---CHHHHhccCCEEEecCC
Q psy15208 811 KIAVIIG-YGDVGKGSAQAMRALSAQVWI--IEIDPICALQAAMEGFLV-----V---TMEYAKKYGDIFVTCTG 874 (1027)
Q Consensus 811 k~VvViG-~G~IG~~vA~~a~~~Ga~ViV--~d~dp~r~~~A~~~G~~v-----~---~~~e~l~~aDvvi~atG 874 (1027)
+||+|+| .|.||+.+++.|...|.+|.| ..+++.+... ...++++ . ...+++..+|.|+.+.+
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~ 77 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-IGGEADVFIGDITDADSINPAFQGIDALVILTS 77 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-TTCCTTEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-ccCCcEEEEeeeccccccccccccceeeEEEEe
Confidence 6899999 599999999999999975444 4556643332 2223322 1 24556778999987654
|
| >d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=85.18 E-value=0.3 Score=49.30 Aligned_cols=31 Identities=26% Similarity=0.359 Sum_probs=29.3
Q ss_pred EEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 813 AVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 813 VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
|+|||.|+.|..+|.+|+.+|.+|.++|.++
T Consensus 4 viVIG~G~aG~~aA~~aa~~G~~V~liE~~~ 34 (259)
T d1onfa1 4 LIVIGGGSGGMAAARRAARHNAKVALVEKSR 34 (259)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 7999999999999999999999999999764
|
| >d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Mitochondrial NAD(P)-dependent malic enzyme species: Pig roundworm (Ascaris suum) [TaxId: 6253]
Probab=85.06 E-value=0.83 Score=47.66 Aligned_cols=112 Identities=13% Similarity=0.227 Sum_probs=71.3
Q ss_pred hhhhhHHHHHh---hhcCccccCCEEEEEcCChhHHHHHHHHHhC----C------C-EEEEEcCCc-----------hh
Q psy15208 791 GCRESLIDGIK---RATDVMIAGKIAVIIGYGDVGKGSAQAMRAL----S------A-QVWIIEIDP-----------IC 845 (1027)
Q Consensus 791 g~~~s~~~~i~---r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~----G------a-~ViV~d~dp-----------~r 845 (1027)
||+--...++. +.++..+...+++|+|+|.-|.++|+.+... | . +++++|..- .+
T Consensus 3 GTa~V~lAglinAlki~gk~l~d~kivi~GAGaAg~gia~~l~~~~~~~G~~~~~a~~~i~~vD~~Glv~~~r~d~~~~k 82 (308)
T d1o0sa1 3 GTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRH 82 (308)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHcEEEEECcCHHHHHHHHHHHHHHHhcCCchhhhhceEEEEeCCCCccCCCcccCHHH
Confidence 44443444433 3457778999999999999999988887654 3 1 488887643 11
Q ss_pred HHHHhhcCcEEcCHHHHhc--cCCEEEecCCCcccCcHHHHhcCC---CCeEEEEecCCCccc
Q psy15208 846 ALQAAMEGFLVVTMEYAKK--YGDIFVTCTGNYHVITHDHMRDMK---DQAIVCNIGHFDNEI 903 (1027)
Q Consensus 846 ~~~A~~~G~~v~~~~e~l~--~aDvvi~atG~~~vi~~~~~~~mk---~gailvNvG~~d~ei 903 (1027)
...|... -+..++.+++. ..+++|-+++..++++++.++.|. +..++.-.+-...++
T Consensus 83 ~~~a~~~-~~~~~l~~~i~~~kptvliG~s~~~g~ft~evv~~Ma~~~~~PIIFaLSNPtp~~ 144 (308)
T d1o0sa1 83 VQFAKDM-PETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALSNPTSKA 144 (308)
T ss_dssp TTTCBSS-CCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECCSSGGGC
T ss_pred HHHHHhc-ccCCcHHHHHhccccccEEecccccCCCCHHHHHHHHhhCCCcEEEEccCCCCCC
Confidence 1112111 11234666655 357888999888999999987774 666665554443333
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=84.90 E-value=0.3 Score=49.80 Aligned_cols=36 Identities=31% Similarity=0.341 Sum_probs=31.4
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHh-CCCEEEEEcCCc
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRA-LSAQVWIIEIDP 843 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~-~Ga~ViV~d~dp 843 (1027)
....-|+|||+|+.|..+|..|+. .|.+|+++|..+
T Consensus 31 ~~e~DViVIGaGpaGL~aA~~LA~~~G~~V~vlE~~~ 67 (278)
T d1rp0a1 31 YAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 67 (278)
T ss_dssp HTEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHccCCeEEEEecCC
Confidence 345679999999999999999865 699999999876
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=84.86 E-value=0.34 Score=49.33 Aligned_cols=34 Identities=18% Similarity=0.280 Sum_probs=27.7
Q ss_pred EEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchh
Q psy15208 812 IAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPIC 845 (1027)
Q Consensus 812 ~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r 845 (1027)
.++|.|.+. ||+++|+.|...|++|++++.++..
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~ 38 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAA 38 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHH
Confidence 356778865 9999999999999999998765543
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=84.74 E-value=0.24 Score=48.66 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=29.7
Q ss_pred CEEEEEcCChhHHHHHHHHHhCC-------CEEEEEcCCc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALS-------AQVWIIEIDP 843 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~G-------a~ViV~d~dp 843 (1027)
.+|+|||.|+-|..+|..|+..| .+|+|+|..|
T Consensus 3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~ 42 (239)
T d1lqta2 3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP 42 (239)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence 48999999999999999998877 5899999876
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=84.64 E-value=0.35 Score=43.06 Aligned_cols=35 Identities=17% Similarity=0.103 Sum_probs=29.5
Q ss_pred cCCEEEEEcCChhHHHHHHHHHhCC---CEEEEEcCCc
Q psy15208 809 AGKIAVIIGYGDVGKGSAQAMRALS---AQVWIIEIDP 843 (1027)
Q Consensus 809 ~Gk~VvViG~G~IG~~vA~~a~~~G---a~ViV~d~dp 843 (1027)
..++++|+|.|.+|..+|..++.+| .+|++++..+
T Consensus 19 ~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~ 56 (117)
T d1aoga2 19 PPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE 56 (117)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred cCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence 4689999999999999998777766 4799998755
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=84.39 E-value=0.34 Score=49.58 Aligned_cols=33 Identities=27% Similarity=0.411 Sum_probs=29.9
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCch
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPI 844 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~ 844 (1027)
.|+|||.|-+|..+|..|+..|. +|+|+|.++.
T Consensus 3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~~~ 36 (305)
T d1pj5a2 3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 36 (305)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 59999999999999999999996 6999998763
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=84.35 E-value=0.36 Score=50.31 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=31.1
Q ss_pred CCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 810 GKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 810 Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
.-.|+|||+|+.|..+|..|+..|.+|+|+|..+
T Consensus 7 ~~dV~IIGAG~sGl~~a~~L~~~G~~v~i~Ek~~ 40 (298)
T d1w4xa1 7 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAG 40 (298)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 4469999999999999999999999999999764
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=84.35 E-value=0.4 Score=44.52 Aligned_cols=32 Identities=28% Similarity=0.437 Sum_probs=27.8
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
.+|+|+|.|.+|..+|..++. +.+|++++..+
T Consensus 1 ~rVvIIGgG~~G~e~A~~l~~-~~~Vtvv~~~~ 32 (167)
T d1xhca1 1 SKVVIVGNGPGGFELAKQLSQ-TYEVTVIDKEP 32 (167)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSSS
T ss_pred CeEEEECCcHHHHHHHHHHHc-CCCEEEEeccc
Confidence 379999999999999999975 77999998654
|
| >d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=84.15 E-value=0.32 Score=47.15 Aligned_cols=31 Identities=26% Similarity=0.254 Sum_probs=28.8
Q ss_pred EEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 813 AVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 813 VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
|+|||.|+-|..+|..|+.+|.+|+++|..+
T Consensus 6 viIIGgGpAGl~aA~~aar~G~~V~viE~~~ 36 (229)
T d3lada1 6 VIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (229)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred EEEECcCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 7999999999999999999999999998643
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=84.03 E-value=0.35 Score=50.12 Aligned_cols=32 Identities=28% Similarity=0.406 Sum_probs=30.2
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
.|+|||+|.-|..+|..|+..|.+|+|+|.++
T Consensus 3 dv~IIGaG~sGl~~A~~L~~~g~~V~iiEk~~ 34 (298)
T d1i8ta1 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRN 34 (298)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred cEEEECCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 58999999999999999999999999999876
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=84.01 E-value=0.6 Score=46.66 Aligned_cols=93 Identities=16% Similarity=0.108 Sum_probs=59.3
Q ss_pred HhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhc-----CcEEc--CHHHHhc---cCCEE
Q psy15208 800 IKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAME-----GFLVV--TMEYAKK---YGDIF 869 (1027)
Q Consensus 800 i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~-----G~~v~--~~~e~l~---~aDvv 869 (1027)
+....++ -.|.+|+-+|+|. |-..|. ++.++.+|+.+|.++.....|... .+.+. +...... ..|.|
T Consensus 62 ml~~L~l-~~g~~VLdIG~Gs-Gy~ta~-La~l~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~~~~pfD~I 138 (224)
T d1vbfa_ 62 MLDELDL-HKGQKVLEIGTGI-GYYTAL-IAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRV 138 (224)
T ss_dssp HHHHTTC-CTTCEEEEECCTT-SHHHHH-HHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEE
T ss_pred HHHHhhh-cccceEEEecCCC-CHHHHH-HHHHhcccccccccHHHHHHHHHHHhcccccccccCchhhcchhhhhHHHH
Confidence 3444453 5899999999994 655554 445678999999999666554431 22222 2222222 25987
Q ss_pred EecCCCcccCcHHHHhcCCCCeEEEEe
Q psy15208 870 VTCTGNYHVITHDHMRDMKDQAIVCNI 896 (1027)
Q Consensus 870 i~atG~~~vi~~~~~~~mk~gailvNv 896 (1027)
+.+.+..+ +-...+++||+||+++-.
T Consensus 139 iv~~a~~~-ip~~l~~qLk~GGrLV~p 164 (224)
T d1vbfa_ 139 VVWATAPT-LLCKPYEQLKEGGIMILP 164 (224)
T ss_dssp EESSBBSS-CCHHHHHTEEEEEEEEEE
T ss_pred Hhhcchhh-hhHHHHHhcCCCCEEEEE
Confidence 75544444 556678999999998763
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=83.87 E-value=0.77 Score=46.07 Aligned_cols=37 Identities=16% Similarity=0.219 Sum_probs=31.1
Q ss_pred EEEEEcCCh-hHHHHHHHHHhCCCE-------EEEEcCCchhHHH
Q psy15208 812 IAVIIGYGD-VGKGSAQAMRALSAQ-------VWIIEIDPICALQ 848 (1027)
Q Consensus 812 ~VvViG~G~-IG~~vA~~a~~~Ga~-------ViV~d~dp~r~~~ 848 (1027)
.|+|.|.+. ||+.+|+.|...|++ |+.+++++.++.+
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~ 47 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEK 47 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHH
Confidence 367889977 999999999999997 8889998866544
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=83.53 E-value=0.31 Score=45.76 Aligned_cols=66 Identities=17% Similarity=0.091 Sum_probs=40.8
Q ss_pred CEEEEEcC-ChhHHHHHHHHHhCCC----E---EEEEcCCch--hHHHHhh---cC-------cE-EcCHHHHhccCCEE
Q psy15208 811 KIAVIIGY-GDVGKGSAQAMRALSA----Q---VWIIEIDPI--CALQAAM---EG-------FL-VVTMEYAKKYGDIF 869 (1027)
Q Consensus 811 k~VvViG~-G~IG~~vA~~a~~~Ga----~---ViV~d~dp~--r~~~A~~---~G-------~~-v~~~~e~l~~aDvv 869 (1027)
-+|.|+|+ |.||..+|..+...+. . ...++.+.. ......+ +. +. .....++++.+|+|
T Consensus 5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~advV 84 (154)
T d1y7ta1 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADYA 84 (154)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhcccccEE
Confidence 38999997 9999999999986543 1 223333332 1111111 11 11 12467889999999
Q ss_pred EecCCCc
Q psy15208 870 VTCTGNY 876 (1027)
Q Consensus 870 i~atG~~ 876 (1027)
|.+.|.+
T Consensus 85 iitaG~~ 91 (154)
T d1y7ta1 85 LLVGAAP 91 (154)
T ss_dssp EECCCCC
T ss_pred EeecCcC
Confidence 9888754
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.44 E-value=0.59 Score=46.24 Aligned_cols=41 Identities=12% Similarity=-0.014 Sum_probs=31.9
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA 850 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~ 850 (1027)
..|.+|+.+|||. |+. +..|+..|++|+.+|.+|.-..+|.
T Consensus 44 ~~~~rvLd~GCG~-G~~-a~~LA~~G~~V~gvD~S~~ai~~a~ 84 (229)
T d2bzga1 44 KSGLRVFFPLCGK-AVE-MKWFADRGHSVVGVEISELGIQEFF 84 (229)
T ss_dssp CCSCEEEETTCTT-CTH-HHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CCCCEEEEeCCCC-cHH-HHHHHhCCCcEEEEeCCHHHHHHHH
Confidence 4789999999999 755 4455568999999999996554443
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=83.38 E-value=0.67 Score=46.15 Aligned_cols=101 Identities=14% Similarity=0.033 Sum_probs=61.8
Q ss_pred hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH----hhcC----cE--EcCHHHHh
Q psy15208 794 ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA----AMEG----FL--VVTMEYAK 863 (1027)
Q Consensus 794 ~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A----~~~G----~~--v~~~~e~l 863 (1027)
...++.+....++ .+|++|+=+|||.=+. +...++..|++|+.+|.+|.-...| ...| ++ ..+..+..
T Consensus 19 ~~~~~~l~~~~~l-~pg~~VLDiGCG~G~~-~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~~ 96 (245)
T d1nkva_ 19 EEKYATLGRVLRM-KPGTRILDLGSGSGEM-LCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV 96 (245)
T ss_dssp HHHHHHHHHHTCC-CTTCEEEEETCTTCHH-HHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC
T ss_pred HHHHHHHHHHcCC-CCCCEEEEEcCCCCHH-HHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhcc
Confidence 4456666665553 5799999999998543 3334566799999999998544333 2234 22 22333333
Q ss_pred --ccCCEEEecC-----CCcccCcHHHHhcCCCCeEEEEe
Q psy15208 864 --KYGDIFVTCT-----GNYHVITHDHMRDMKDQAIVCNI 896 (1027)
Q Consensus 864 --~~aDvvi~at-----G~~~vi~~~~~~~mk~gailvNv 896 (1027)
...|+|+..- .+...+-++..+.|||||+++..
T Consensus 97 ~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~ 136 (245)
T d1nkva_ 97 ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIG 136 (245)
T ss_dssp CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEE
T ss_pred ccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEE
Confidence 2468886532 22222233446778999998765
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=83.36 E-value=0.95 Score=43.27 Aligned_cols=86 Identities=22% Similarity=0.160 Sum_probs=51.2
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEE-cCCchhHHHHhhcCcE-------------------------Ec---CHHHH
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWII-EIDPICALQAAMEGFL-------------------------VV---TMEYA 862 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~-d~dp~r~~~A~~~G~~-------------------------v~---~~~e~ 862 (1027)
+|+|=|+|+|||.+.+.+...+.+|+.. |........+...-++ +. ++++.
T Consensus 2 kIgINGfGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~i 81 (169)
T d1dssg1 2 KIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPENI 81 (169)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGGC
T ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHHC
Confidence 6899999999999999998888875554 5433222223322111 00 11111
Q ss_pred ---hccCCEEEecCCCcccCcHHH-HhcCCCCeEEEEecCC
Q psy15208 863 ---KKYGDIFVTCTGNYHVITHDH-MRDMKDQAIVCNIGHF 899 (1027)
Q Consensus 863 ---l~~aDvvi~atG~~~vi~~~~-~~~mk~gailvNvG~~ 899 (1027)
-..+|+|++|||.-. +.+. -..++.|+.=|-+...
T Consensus 82 ~W~~~gvD~ViEcTG~f~--~~~~~~~hl~~gakkViisaP 120 (169)
T d1dssg1 82 PWSKAGAEYIVESTGVFT--TIEKASAHFKGGAKKVIISAP 120 (169)
T ss_dssp CHHHHTCCEEEECSSSCC--SHHHHGGGGTTTCSEEEESSC
T ss_pred CccccCCCEEEecCceEc--CHHHHHHHHhcCCceEeecCC
Confidence 114899999999653 3332 3346667765555554
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=83.29 E-value=0.4 Score=48.36 Aligned_cols=32 Identities=9% Similarity=0.295 Sum_probs=29.6
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
-|+|||.|-+|..+|..|+..|.+|+|+|..+
T Consensus 5 DvvIIGaGi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 5 DVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 38999999999999999999999999998753
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=83.27 E-value=0.38 Score=49.77 Aligned_cols=33 Identities=24% Similarity=0.306 Sum_probs=29.1
Q ss_pred CEEEEEcCChhHHHHHHHHH-----hCCCEEEEEcCCc
Q psy15208 811 KIAVIIGYGDVGKGSAQAMR-----ALSAQVWIIEIDP 843 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~-----~~Ga~ViV~d~dp 843 (1027)
--|+|+|+|+.|..+|..|+ ..|.+|+|+|..|
T Consensus 8 yDV~IvGaG~aGl~lA~~La~~~~~~~G~~v~vlEr~~ 45 (360)
T d1pn0a1 8 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 45 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence 35899999999999999995 5799999999875
|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=83.19 E-value=0.4 Score=49.81 Aligned_cols=32 Identities=41% Similarity=0.635 Sum_probs=30.2
Q ss_pred EEEEcCChhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 813 AVIIGYGDVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 813 VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
|+|||.|..|..+|..|+..|++|+++|..+.
T Consensus 26 VvVIG~G~aGl~aA~~la~~G~~V~llEk~~~ 57 (322)
T d1d4ca2 26 VVIIGSGGAGLAAAVSARDAGAKVILLEKEPI 57 (322)
T ss_dssp EEEECSSHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 99999999999999999999999999998764
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=83.01 E-value=1.1 Score=45.05 Aligned_cols=64 Identities=19% Similarity=0.226 Sum_probs=44.4
Q ss_pred CEEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchh--------HHHHhhcCcEEcC--------HHHHhccCCEEEecC
Q psy15208 811 KIAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPIC--------ALQAAMEGFLVVT--------MEYAKKYGDIFVTCT 873 (1027)
Q Consensus 811 k~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r--------~~~A~~~G~~v~~--------~~e~l~~aDvvi~at 873 (1027)
++|+|+|. |.||+.+++.|...|.+|+++.+++.. .......+++++. +.+++..++.++.+.
T Consensus 4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~~ 83 (312)
T d1qyda_ 4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISAL 83 (312)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhhh
Confidence 46999995 999999999999999999998765421 1112334555432 345566788887755
Q ss_pred C
Q psy15208 874 G 874 (1027)
Q Consensus 874 G 874 (1027)
+
T Consensus 84 ~ 84 (312)
T d1qyda_ 84 A 84 (312)
T ss_dssp C
T ss_pred h
Confidence 3
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=82.90 E-value=0.82 Score=45.34 Aligned_cols=97 Identities=16% Similarity=0.166 Sum_probs=61.5
Q ss_pred HHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHh----hcCcE---Ec--CHHHHh---
Q psy15208 796 LIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAA----MEGFL---VV--TMEYAK--- 863 (1027)
Q Consensus 796 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~----~~G~~---v~--~~~e~l--- 863 (1027)
....+....+ ...|.+|+.||+|. |-..|..++-.|.+|+.+|.++.....|. ..|+. +. +..+..
T Consensus 66 ~~a~ml~~L~-l~~g~~VLeIGsGs-GY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~~ 143 (215)
T d1jg1a_ 66 MVAIMLEIAN-LKPGMNILEVGTGS-GWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPK 143 (215)
T ss_dssp HHHHHHHHHT-CCTTCCEEEECCTT-SHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred hHHHHHHhhc-cCccceEEEecCCC-ChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCCccc
Confidence 4444455545 35899999999986 44445555445788999999985444332 33432 22 122211
Q ss_pred ccCCEEEecCCCcccCcHHHHhcCCCCeEEEE
Q psy15208 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCN 895 (1027)
Q Consensus 864 ~~aDvvi~atG~~~vi~~~~~~~mk~gailvN 895 (1027)
...|.|+.+.+... +....+++||+||+++-
T Consensus 144 ~pfD~Iiv~~a~~~-ip~~l~~qL~~gGrLv~ 174 (215)
T d1jg1a_ 144 APYDVIIVTAGAPK-IPEPLIEQLKIGGKLII 174 (215)
T ss_dssp CCEEEEEECSBBSS-CCHHHHHTEEEEEEEEE
T ss_pred CcceeEEeeccccc-CCHHHHHhcCCCCEEEE
Confidence 23598876555544 66678999999999875
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=82.38 E-value=1.8 Score=44.54 Aligned_cols=97 Identities=13% Similarity=-0.007 Sum_probs=59.0
Q ss_pred HHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHH----hhcCc----E--EcCHHHHhccCC
Q psy15208 798 DGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQA----AMEGF----L--VVTMEYAKKYGD 867 (1027)
Q Consensus 798 ~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A----~~~G~----~--v~~~~e~l~~aD 867 (1027)
+.+.+..++ -+|.+|+=+|||+=|..+ ..++..||+|+.+.+++.....| ...|. + ..+..+.-...|
T Consensus 52 ~~~~~~l~l-~~G~~VLDiGCG~G~~a~-~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~fD 129 (285)
T d1kpga_ 52 DLALGKLGL-QPGMTLLDVGCGWGATMM-RAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVD 129 (285)
T ss_dssp HHHHTTTTC-CTTCEEEEETCTTSHHHH-HHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCS
T ss_pred HHHHHHcCC-CCCCEEEEecCcchHHHH-HHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccc
Confidence 444444453 589999999999965443 45566799999999998654432 22332 1 223333334578
Q ss_pred EEEe-----cCCCc--ccCcHHHHhcCCCCeEEEEe
Q psy15208 868 IFVT-----CTGNY--HVITHDHMRDMKDQAIVCNI 896 (1027)
Q Consensus 868 vvi~-----atG~~--~vi~~~~~~~mk~gailvNv 896 (1027)
.|+. +.|.+ ..+-++.-+.||+||+++.-
T Consensus 130 ~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~ 165 (285)
T d1kpga_ 130 RIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLH 165 (285)
T ss_dssp EEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred ceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEE
Confidence 7764 33332 12223335679999998753
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=82.25 E-value=1 Score=41.95 Aligned_cols=65 Identities=14% Similarity=0.144 Sum_probs=42.5
Q ss_pred EEEEEcC-ChhHHHHHHHHHhCCC-------EEEEEcCCchhHH-HHh----hcC----cE----EcCHHHHhccCCEEE
Q psy15208 812 IAVIIGY-GDVGKGSAQAMRALSA-------QVWIIEIDPICAL-QAA----MEG----FL----VVTMEYAKKYGDIFV 870 (1027)
Q Consensus 812 ~VvViG~-G~IG~~vA~~a~~~Ga-------~ViV~d~dp~r~~-~A~----~~G----~~----v~~~~e~l~~aDvvi 870 (1027)
+|.|+|+ |.||..+|..+...+. ....+|.+..... ++. .+. .. ..+..++++++|+||
T Consensus 5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvVV 84 (154)
T d5mdha1 5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVAI 84 (154)
T ss_dssp EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCceEEE
Confidence 7999995 9999999998875332 3555666653221 111 111 11 124678899999999
Q ss_pred ecCCCc
Q psy15208 871 TCTGNY 876 (1027)
Q Consensus 871 ~atG~~ 876 (1027)
.+.|.+
T Consensus 85 itag~~ 90 (154)
T d5mdha1 85 LVGSMP 90 (154)
T ss_dssp ECCSCC
T ss_pred EecccC
Confidence 888764
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=82.22 E-value=0.52 Score=47.28 Aligned_cols=36 Identities=22% Similarity=0.146 Sum_probs=31.8
Q ss_pred EEEEEcCCh-hHHHHHHHHHhCCCEEEEEcCCchhHH
Q psy15208 812 IAVIIGYGD-VGKGSAQAMRALSAQVWIIEIDPICAL 847 (1027)
Q Consensus 812 ~VvViG~G~-IG~~vA~~a~~~Ga~ViV~d~dp~r~~ 847 (1027)
+++|.|.+. ||+++|+.|...|++|++++++.....
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~ 39 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAA 39 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHH
Confidence 678999888 999999999999999999998875543
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=82.19 E-value=1.2 Score=44.16 Aligned_cols=89 Identities=10% Similarity=0.065 Sum_probs=58.4
Q ss_pred ccCCEEEEEcCCh--hHHHHHHHHHhCCC----EEEEEcCCchhHHHHhh------------cCcEEc--CHHHHh---c
Q psy15208 808 IAGKIAVIIGYGD--VGKGSAQAMRALSA----QVWIIEIDPICALQAAM------------EGFLVV--TMEYAK---K 864 (1027)
Q Consensus 808 l~Gk~VvViG~G~--IG~~vA~~a~~~Ga----~ViV~d~dp~r~~~A~~------------~G~~v~--~~~e~l---~ 864 (1027)
-.|++|+.+|+|. .-.-+++.+...|+ +|+.+|.++.-...|.. ..+.+. +..+.. .
T Consensus 79 ~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~~~~~ 158 (223)
T d1r18a_ 79 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNA 158 (223)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGGC
T ss_pred CCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccccccc
Confidence 4799999998876 56666777777774 89999999855444422 122221 222211 2
Q ss_pred cCCEEEecCCCcccCcHHHHhcCCCCeEEEE-ec
Q psy15208 865 YGDIFVTCTGNYHVITHDHMRDMKDQAIVCN-IG 897 (1027)
Q Consensus 865 ~aDvvi~atG~~~vi~~~~~~~mk~gailvN-vG 897 (1027)
..|.|+.+.+... +....+++||+||+++- +|
T Consensus 159 ~fD~Iiv~~a~~~-~p~~l~~~Lk~gG~lV~pvg 191 (223)
T d1r18a_ 159 PYNAIHVGAAAPD-TPTELINQLASGGRLIVPVG 191 (223)
T ss_dssp SEEEEEECSCBSS-CCHHHHHTEEEEEEEEEEES
T ss_pred ceeeEEEEeechh-chHHHHHhcCCCcEEEEEEe
Confidence 3598776555554 56677899999999965 44
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=82.05 E-value=5.3 Score=38.92 Aligned_cols=106 Identities=16% Similarity=0.152 Sum_probs=64.1
Q ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHHh--CCcEEEEEcCCCCCCCCC-CCCCc----cchHHHHHHHHHHHHHhCCCC
Q psy15208 35 VVLIAHPHPLFGGTMDNKVVQTLVRVMLS--LGYISIRMNFRGVGASSG-TYDSG----NGETDDMEILLRYIQKKYPYL 107 (1027)
Q Consensus 35 vVVllHG~~~~gGs~~~~~~~~la~~La~--~Gy~Vla~DlrGhG~S~g-~~~~~----~~~~~Dv~avl~~L~~~~~~~ 107 (1027)
.||+.-|-.+..+.. ....++..+.+ .|..+..++||..-.... ...++ ..-+.++...++....+.|..
T Consensus 6 ~vi~aRGT~E~~~~G---~~~~~~~~~~~~~~~~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~t 82 (207)
T d1qoza_ 6 HVFGARETTVSQGYG---SSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDT 82 (207)
T ss_dssp EEEEECCTTCCSSCG---GGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred EEEEecCCCCCCCCC---cchHHHHHHHHhCCCCeEEEeeecccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCC
Confidence 467777754432211 11233333322 267788889987543211 00121 123566777778888889999
Q ss_pred cEEEEEechhHHHHHHHHHhcCC----------------cCCccEEEEEccC
Q psy15208 108 PIILAGFSFGTFVQAKLQKRLDK----------------EISIKILILISVA 143 (1027)
Q Consensus 108 pviLVGhSmGG~vAl~~A~~~p~----------------~~~V~gLVli~p~ 143 (1027)
+++|+|+|+|+.++-.++..... ..+|.++++++-+
T Consensus 83 kivl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~V~avvl~GdP 134 (207)
T d1qoza_ 83 QLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDP 134 (207)
T ss_dssp EEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred eEEEEeeccchHHHHHHHhccCccccccccCCCCCChhhhhcEEEEEEEeCC
Confidence 99999999999999887643110 0147888888743
|
| >d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=81.90 E-value=0.49 Score=47.72 Aligned_cols=32 Identities=28% Similarity=0.435 Sum_probs=29.8
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEcCCc
Q psy15208 812 IAVIIGYGDVGKGSAQAMRALSAQVWIIEIDP 843 (1027)
Q Consensus 812 ~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp 843 (1027)
.|+|||.|+.|..+|..++.+|.+|+++|..+
T Consensus 44 DvvVIGgG~aG~~aA~~~a~~G~kv~vve~~~ 75 (261)
T d1mo9a1 44 DAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 75 (261)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 48999999999999999999999999998765
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=81.82 E-value=1.2 Score=48.23 Aligned_cols=107 Identities=11% Similarity=0.102 Sum_probs=69.0
Q ss_pred ccchhhh-hhHHHHHhhhcCccccCCEEEEEcCChhHHHHHHHHHhCCC-EEEEEcCCchhHHHHhhc------------
Q psy15208 787 DNLYGCR-ESLIDGIKRATDVMIAGKIAVIIGYGDVGKGSAQAMRALSA-QVWIIEIDPICALQAAME------------ 852 (1027)
Q Consensus 787 dn~~g~~-~s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~a~~~Ga-~ViV~d~dp~r~~~A~~~------------ 852 (1027)
++.||-- -.+...+.+..++ -.|++++=+|+|. |..+.+.++.+|+ +|+.+|.++.....|...
T Consensus 194 ~~vYGEl~~~~i~~Il~~l~L-kpgd~fLDLGCG~-G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g 271 (406)
T d1u2za_ 194 NYVYGELLPNFLSDVYQQCQL-KKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYG 271 (406)
T ss_dssp GGCCCCBCHHHHHHHHHHTTC-CTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCccccCCHHHHHHHHHHhCC-CCCCEEEeCCCCC-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhc
Confidence 4567632 2344445555553 6899999999996 7777777778887 899999998655444321
Q ss_pred ---CcE---E-------cCHHHHhccCCEEEecCCC-----cccCcHHHHhcCCCCeEEEEe
Q psy15208 853 ---GFL---V-------VTMEYAKKYGDIFVTCTGN-----YHVITHDHMRDMKDQAIVCNI 896 (1027)
Q Consensus 853 ---G~~---v-------~~~~e~l~~aDvvi~atG~-----~~vi~~~~~~~mk~gailvNv 896 (1027)
+.. . ...++.+..+|+|+...-. .+.+ .+.++.||+||.+|..
T Consensus 272 ~~~~~~~~~~~~~f~~~~~~d~~~~~adVV~inn~~f~~~l~~~L-~ei~r~LKPGGrIVs~ 332 (406)
T d1u2za_ 272 MRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKV-EKILQTAKVGCKIISL 332 (406)
T ss_dssp BCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHH-HHHHTTCCTTCEEEES
T ss_pred cccccceeeeeechhhccccccccccceEEEEecccCchHHHHHH-HHHHHhcCCCcEEEEe
Confidence 110 0 1144566789998754211 1223 3568899999999875
|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=81.29 E-value=0.43 Score=49.56 Aligned_cols=34 Identities=21% Similarity=0.441 Sum_probs=31.0
Q ss_pred CEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 811 KIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 811 k~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
--|+|||.|..|..+|..|+..|++|+++|..+.
T Consensus 20 ~DVvVIGaG~aGl~AA~~aa~~G~~V~vlEK~~~ 53 (317)
T d1qo8a2 20 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPF 53 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred cCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 3599999999999999999999999999998763
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=80.83 E-value=0.96 Score=46.01 Aligned_cols=90 Identities=13% Similarity=0.142 Sum_probs=55.0
Q ss_pred ccCCEEEEEcCChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhh----cC----cEE--cCHHHH-h--ccCCEEEecCC
Q psy15208 808 IAGKIAVIIGYGDVGKGSAQAMRALSAQVWIIEIDPICALQAAM----EG----FLV--VTMEYA-K--KYGDIFVTCTG 874 (1027)
Q Consensus 808 l~Gk~VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~----~G----~~v--~~~~e~-l--~~aDvvi~atG 874 (1027)
-+|.+|+=+|||. |..+...++.+|++|+.+|.+|.....|.. .| +++ .+..+. + ...|+|+..-.
T Consensus 66 ~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~~~~sfD~V~~~~~ 144 (282)
T d2o57a1 66 QRQAKGLDLGAGY-GGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDA 144 (282)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCCEEEEeCCCC-cHHHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccccccccchhhccch
Confidence 4799999999996 444444455579999999999865443332 22 332 233322 1 23688875332
Q ss_pred Cccc-----CcHHHHhcCCCCeEEEEecC
Q psy15208 875 NYHV-----ITHDHMRDMKDQAIVCNIGH 898 (1027)
Q Consensus 875 ~~~v-----i~~~~~~~mk~gailvNvG~ 898 (1027)
-.++ +-.+..+.||+||+++-...
T Consensus 145 l~h~~d~~~~l~~~~~~LkpgG~l~~~~~ 173 (282)
T d2o57a1 145 FLHSPDKLKVFQECARVLKPRGVMAITDP 173 (282)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhccCHHHHHHHHHHhcCCCcEEEEEEe
Confidence 2222 22344677999999887643
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=80.75 E-value=1 Score=40.98 Aligned_cols=47 Identities=13% Similarity=0.308 Sum_probs=36.6
Q ss_pred EEEEEcC-ChhHHHHHHHHHhCCCEEEE-EcCCchhHHHHhhcCcEEcCHHHHhccCCEEEecCC
Q psy15208 812 IAVIIGY-GDVGKGSAQAMRALSAQVWI-IEIDPICALQAAMEGFLVVTMEYAKKYGDIFVTCTG 874 (1027)
Q Consensus 812 ~VvViG~-G~IG~~vA~~a~~~Ga~ViV-~d~dp~r~~~A~~~G~~v~~~~e~l~~aDvvi~atG 874 (1027)
+|+|+|+ |+.|+.+++.+...|.+++. +|.+. .+.+..+|++|+-|.
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~----------------~~~~~~~DVvIDFS~ 50 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG----------------VEELDSPDVVIDFSS 50 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE----------------EEECSCCSEEEECSC
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc----------------HHHhccCCEEEEecC
Confidence 6899997 99999999999999997654 44432 234567899999873
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=80.44 E-value=0.63 Score=46.51 Aligned_cols=56 Identities=13% Similarity=0.291 Sum_probs=40.8
Q ss_pred EEEEEcC-ChhHHHHHHHHHhCCCEEEEEcCCchhHHHHhhcCcEEcCHHHHhc--cCCEEEecCC
Q psy15208 812 IAVIIGY-GDVGKGSAQAMRALSAQVWIIEIDPICALQAAMEGFLVVTMEYAKK--YGDIFVTCTG 874 (1027)
Q Consensus 812 ~VvViG~-G~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~A~~~G~~v~~~~e~l~--~aDvvi~atG 874 (1027)
+|+|+|. |-||+.+++.|...|.+|+.+++...... +...+++++. ..|+|+.+.+
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~~D~~-------d~~~~~~~l~~~~~d~vih~a~ 61 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDIT-------NVLAVNKFFNEKKPNVVINCAA 61 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTT-------CHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeechhccCC-------CHHHHHHHHHHcCCCEEEeecc
Confidence 5899998 99999999999999999999987652110 1112344554 4699987665
|
| >d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Fumarate reductase species: Wolinella succinogenes [TaxId: 844]
Probab=80.33 E-value=0.6 Score=48.35 Aligned_cols=32 Identities=22% Similarity=0.368 Sum_probs=30.3
Q ss_pred EEEEcCChhHHHHHHHHHhCCCEEEEEcCCch
Q psy15208 813 AVIIGYGDVGKGSAQAMRALSAQVWIIEIDPI 844 (1027)
Q Consensus 813 VvViG~G~IG~~vA~~a~~~Ga~ViV~d~dp~ 844 (1027)
|+|||.|.-|...|..|+..|++|+++|..+.
T Consensus 8 VvVIG~G~AGl~AAl~aa~~G~~V~liEK~~~ 39 (336)
T d2bs2a2 8 SLVIGGGLAGLRAAVATQQKGLSTIVLSLIPV 39 (336)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCCEEEECSSCG
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 89999999999999999999999999998764
|
| >d1mv8a3 c.26.3.1 (A:301-436) GDP-mannose 6-dehydrogenase, GDP-binding domain {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain family: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain domain: GDP-mannose 6-dehydrogenase, GDP-binding domain species: Pseudomonas aeruginosa [TaxId: 287]
Probab=80.04 E-value=3.6 Score=37.13 Aligned_cols=85 Identities=11% Similarity=0.112 Sum_probs=59.1
Q ss_pred ccCCEEEEEcCC----------hhHHHHHHHHHhCCCEEEEEcCCchhHHH--------Hhh------cCcEEcCHHHHh
Q psy15208 808 IAGKIAVIIGYG----------DVGKGSAQAMRALSAQVWIIEIDPICALQ--------AAM------EGFLVVTMEYAK 863 (1027)
Q Consensus 808 l~Gk~VvViG~G----------~IG~~vA~~a~~~Ga~ViV~d~dp~r~~~--------A~~------~G~~v~~~~e~l 863 (1027)
+.+++|+|+|.- .=...++..|...|++|.++| |.-... ... ......++.+++
T Consensus 11 ~~~kkI~ilGlafK~~t~D~R~Sps~~li~~L~~~g~~V~~~D--P~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~i 88 (136)
T d1mv8a3 11 HDTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFD--RNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVV 88 (136)
T ss_dssp SSCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEEC--HHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHH
T ss_pred cCCCEEEEEEEEECCCCcchhcCHHHHHHHHHhhhhccccccC--CCCCHHHHhhhhhhhhhhccccccceeehhhhhhh
Confidence 578999999975 356789999999999999995 421110 000 011245788999
Q ss_pred ccCCEEEecCCCcccCcHHHHhcCCCCeEEEEe
Q psy15208 864 KYGDIFVTCTGNYHVITHDHMRDMKDQAIVCNI 896 (1027)
Q Consensus 864 ~~aDvvi~atG~~~vi~~~~~~~mk~gailvNv 896 (1027)
..+|++|.+|..+.. . +....++++.+++++
T Consensus 89 ~~~D~ivi~t~h~~f-~-~l~~~~~~~~~I~D~ 119 (136)
T d1mv8a3 89 ASSDVLVLGNGDELF-V-DLVNKTPSGKKLVDL 119 (136)
T ss_dssp HHCSEEEECSCCGGG-H-HHHHSCCTTCEEEES
T ss_pred hhceEEEEEeCCHHH-H-HHHHHhcCCCEEEEC
Confidence 999999999987753 3 234566777777775
|