Psyllid ID: psy15498

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-----
MLIQKGEEVAKKKKKKKNKNKAAAATEEAPKNGVPQQTTPPSIPVSQLYPDDDEIEDGDVEDGAAEASKKKKRKKKKKKAGAGEAAADVPIDGNGIAEQLEQCGLNGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEARQAAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHINGEEVAKKKKKKKNKNKAAAATEEAPKNGIPQQTTPPSIPVSQLYPDGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEARQAAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHINGRIIDCAFTLAYNNKYDKLIEAVRDATNTGIKAAGIDVPLCEVGAAIQEVMESYEVEIDGKTYQVKSIRNLNGHSIDSYRIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLRLASSKSLLNTINKNFGTLAFCKRWLDRAGCTKYQMALKDLCDKGIVEAYPPLCDIKGSYTAQFEHTIVLRPTCKEVISRGDDY
ccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEcccccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEEEcEEEccEEEEEEEEcccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEEEEEEEccEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHEEEEEEccccccEEEcccccccccccEEcccccccccccccccccccccEEEEEEEEEccccEEEEcccEEEEEEcccccccccccHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHccccEEcccEEcccccEEEEEEEEEEEcccccEEccccccc
cHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHcccccccccHHHHHHHHHHHHHccccccccccccccccccccccHHHHcccccccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccccEEEEccEEEccccccccccEcccccEEEEEEEEEEccEEEEcEEEEEccccHHHHHHHHHHccccccccccccccHHHHcccccccccEEEEcccccccccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccccEEEEccEEEccccccccccEcccccEEEEEEEEEEccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHcccccEHHHHHHHHHHHHHHEEEEEcccEEEEEEEEcccccccccEEEEcccccEEEEcccccEcccccEEEEEEccccccEEEEccccccHccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHccHHHHHHHHHHHHccccccccccccccccEEEEEEEEEEEccccEEEEEccccc
MLIQKGEEVAKKKKKKKNKNKAAAAteeapkngvpqqttppsipvsqlypdddeiedgdvedgAAEASKKKKRKKKKkkagageaaadvpidgnGIAEQLEqcglngnfpvgqemeyptlkdgrtgkdrftNEEKKAIDRLHNDMYNEARQAAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGedglkaglafptgcsrnhcaahytpnngdktvlefdditkidfgthingeEVAKKKKKKKNKNKAAAAteeapkngipqqttppsipvsqlypdgnfpvgqemeyptlkdgrtgkdrftNEEKKAIDRLHNDMYNEARQAAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGedglkaglafptgcsrnhcaahytpnngdktvlefdditkidfgthingRIIDCAFTLAYNNKYDKLIEAVRDATNTgikaagidvplcEVGAAIQEVMESYEVEIDGKTYQVKSIrnlnghsidsyrihagktvpivrggegtlmeenEFYAIETfgstgkgmvhddmdVSHYMKNFEASYIPLRLASSKSLLNTINKNFGTLAFCKRWLDRAGCTKYQMALKDLCDKgiveaypplcdikgsytaqFEHTIVLRPTCKEVISRGDDY
mliqkgeevakkkkkkknknkaaaateeapkngvpqqttppsiPVSQLYPDDDEIEDGDVedgaaeaskkkkrkkkkkkagageaaadvpidgNGIAEQLEQCGLNGNFPVGQEmeyptlkdgrtgkdrftNEEKKAIDRLHNDMYNEARQAAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHytpnngdktvLEFDDITKIDfgthingeevakkkkkkknKNKAAaateeapkngipqqttppsIPVSQLYPDGNFPVGQEmeyptlkdgrtgkdrftNEEKKAIDRLHNDMYNEARQAAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHytpnngdktvLEFDDITKIDFGTHINGRIIDCAFTLAYNNKYDKLIEAVRDATNTGIKAAGIDVPLCEVGAAIQEVMESYEVEIDGKTYQVKSIRNLNGhsidsyrihagktvpivRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLRLASSKSLLNTINKNFGTLAFCKRWLDRAGCTKYQMALKDLCDKGIVEAYPPLCDIKGSYTAQFEHtivlrptckevisrgddy
MLIQKGEEVakkkkkkknknkaaaaTEEAPKNGVPQQTTPPSIPVSQLYPdddeiedgdvedgaaeaskkkkrkkkkkkagageaaaDVPIDGNGIAEQLEQCGLNGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEARQAAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHINGEEVakkkkkkknknkaaaaTEEAPKNGIPQQTTPPSIPVSQLYPDGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEARQAAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHINGRIIDCAFTLAYNNKYDKLIEAVRDATNTGIKAAGIDVPLCEVGAAIQEVMESYEVEIDGKTYQVKSIRNLNGHSIDSYRIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLRLASSKSLLNTINKNFGTLAFCKRWLDRAGCTKYQMALKDLCDKGIVEAYPPLCDIKGSYTAQFEHTIVLRPTCKEVISRGDDY
***************************************************************************************************LEQCGLNGNF*************************************************VRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHI***************************************************************************************************VRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHINGRIIDCAFTLAYNNKYDKLIEAVRDATNTGIKAAGIDVPLCEVGAAIQEVMESYEVEIDGKTYQVKSIRNLNGHSIDSYRIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLRLASSKSLLNTINKNFGTLAFCKRWLDRAGCTKYQMALKDLCDKGIVEAYPPLCDIKGSYTAQFEHTIVLRPTCKEVI******
***************************************************************************************************LEQCGLNGNFPVGQEMEYPTLKD******************LHNDMYNEARQAAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHINGEEVAKKKKK**************PKNGIPQQTTPPSIPVSQLYPDGNFPVGQEMEYPTLK*******************L*NDMYNEARQAAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHINGRIIDCAFTLAYNNKYDKLIEAVRDATNTGIKAAGIDVPLCEVGAAIQEVMESYEVEIDGKTYQVKSIRNLNGHSIDSYRIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEAS****R**SSKSLLNTINKNFGTLAFCKRWLDRAGCTKYQMALKDLCDKGIVEAYPPLCDIKGSYTAQFEHTIVLRPTCKEVISRG***
***************************************PPSIPVSQLYPDDDEIEDGDVE*************************ADVPIDGNGIAEQLEQCGLNGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEAR*********RKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHINGEE*****************************TTPPSIPVSQLYPDGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEAR*********RKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHINGRIIDCAFTLAYNNKYDKLIEAVRDATNTGIKAAGIDVPLCEVGAAIQEVMESYEVEIDGKTYQVKSIRNLNGHSIDSYRIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLRLASSKSLLNTINKNFGTLAFCKRWLDRAGCTKYQMALKDLCDKGIVEAYPPLCDIKGSYTAQFEHTIVLRPTCKEVISRGDDY
*****GEEVAKKK*******************************************************************************GNGIAEQLEQCGLNGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEARQAAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHINGEEVAKKKKKKKNKNKAAAATEEAPKNGIPQQTTPPSIPVSQLYPDGNFPVGQEMEYPTL*********FTNEEKKAIDRLHNDMYNEARQAAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHINGRIIDCAFTLAYNNKYDKLIEAVRDATNTGIKAAGIDVPLCEVGAAIQEVMESYEVEIDGKTYQVKSIRNLNGHSIDSYRIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLRLASSKSLLNTINKNFGTLAFCKRWLDRAGCTKYQMALKDLCDKGIVEAYPPLCDIKGSYTAQFEHTIVLRPTCKEVISR****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLIQKGEEVAKKKKKKKNKNKAAAATEEAPKNGVPQQTTPPSIPVSQLYPDDDEIEDGDVEDGAAEASKKKKRKKKKKKAGAGEAAADVPIDGNGIAEQLEQCGLNGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEARQAAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHINGEEVAKKKKKKKNKNKAAAATEEAPKNGIPQQTTPPSIPVSQLYPDGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEARQAAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHINGRIIDCAFTLAYNNKYDKLIEAVRDATNTGIKAAGIDVPLCEVGAAIQEVMESYEVEIDGKTYQVKSIRNLNGHSIDSYRIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLRLASSKSLLNTINKNFGTLAFCKRWLDRAGCTKYQMALKDLCDKGIVEAYPPLCDIKGSYTAQFEHTIVLRPTCKEVISRGDDY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query635 2.2.26 [Sep-21-2011]
P50579478 Methionine aminopeptidase yes N/A 0.577 0.767 0.746 1e-168
Q3ZC89477 Methionine aminopeptidase yes N/A 0.577 0.769 0.743 1e-167
O08663478 Methionine aminopeptidase yes N/A 0.577 0.767 0.746 1e-167
P38062478 Methionine aminopeptidase yes N/A 0.577 0.767 0.746 1e-167
Q56Y85439 Methionine aminopeptidase yes N/A 0.574 0.831 0.667 1e-149
Q9FV49441 Methionine aminopeptidase no N/A 0.571 0.823 0.652 1e-144
B8LUH2443 Methionine aminopeptidase N/A N/A 0.570 0.817 0.600 1e-131
Q0CL94445 Methionine aminopeptidase N/A N/A 0.570 0.813 0.600 1e-131
Q55C21436 Methionine aminopeptidase yes N/A 0.565 0.823 0.611 1e-131
O60085426 Methionine aminopeptidase yes N/A 0.571 0.852 0.589 1e-130
>sp|P50579|AMPM2_HUMAN Methionine aminopeptidase 2 OS=Homo sapiens GN=METAP2 PE=1 SV=1 Back     alignment and function desciption
 Score =  592 bits (1525), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 274/367 (74%), Positives = 315/367 (85%)

Query: 269 QTTPPSIPVSQLYPDGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEARQ 328
           QT PPS+P+  LYP+G FP GQE EYP  +DGRT   R T+EEKKA+D+   +++N+ R+
Sbjct: 112 QTDPPSVPICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQASEEIWNDFRE 171

Query: 329 AAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAH 388
           AAEAHRQVRK++M WIKPGMTMIEI E+LE  SR LI E+GL AGLAFPTGCS N+CAAH
Sbjct: 172 AAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGCSLNNCAAH 231

Query: 389 YTPNNGDKTVLEFDDITKIDFGTHINGRIIDCAFTLAYNNKYDKLIEAVRDATNTGIKAA 448
           YTPN GD TVL++DDI KIDFGTHI+GRIIDCAFT+ +N KYD L++AV+DATNTGIK A
Sbjct: 232 YTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFNPKYDTLLKAVKDATNTGIKCA 291

Query: 449 GIDVPLCEVGAAIQEVMESYEVEIDGKTYQVKSIRNLNGHSIDSYRIHAGKTVPIVRGGE 508
           GIDV LC+VG AIQEVMESYEVEIDGKTYQVK IRNLNGHSI  YRIHAGKTVPIV+GGE
Sbjct: 292 GIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQYRIHAGKTVPIVKGGE 351

Query: 509 GTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLRLASSKSLLNTINKNFG 568
            T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+RL  +K LLN IN+NFG
Sbjct: 352 ATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFG 411

Query: 569 TLAFCKRWLDRAGCTKYQMALKDLCDKGIVEAYPPLCDIKGSYTAQFEHTIVLRPTCKEV 628
           TLAFC+RWLDR G +KY MALK+LCD GIV+ YPPLCDIKGSYTAQFEHTI+LRPTCKEV
Sbjct: 412 TLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEV 471

Query: 629 ISRGDDY 635
           +SRGDDY
Sbjct: 472 VSRGDDY 478
Protects eukaryotic initiation factor EIF2S1 from translation-inhibiting phosphorylation by inhibitory kinases such as EIF2AK2/PKR and EIF2AK1/HCR. Plays a critical role in the regulation of protein synthesis.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 8
>sp|Q3ZC89|AMPM2_BOVIN Methionine aminopeptidase 2 OS=Bos taurus GN=METAP2 PE=2 SV=1 Back     alignment and function description
>sp|O08663|AMPM2_MOUSE Methionine aminopeptidase 2 OS=Mus musculus GN=Metap2 PE=1 SV=1 Back     alignment and function description
>sp|P38062|AMPM2_RAT Methionine aminopeptidase 2 OS=Rattus norvegicus GN=Metap2 PE=1 SV=2 Back     alignment and function description
>sp|Q56Y85|AMP2B_ARATH Methionine aminopeptidase 2B OS=Arabidopsis thaliana GN=MAP2B PE=2 SV=2 Back     alignment and function description
>sp|Q9FV49|AMP2A_ARATH Methionine aminopeptidase 2A OS=Arabidopsis thaliana GN=MAP2A PE=2 SV=2 Back     alignment and function description
>sp|B8LUH2|AMP2A_TALSN Methionine aminopeptidase 2 homolog TSTA_071420 OS=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) GN=TSTA_071420 PE=3 SV=1 Back     alignment and function description
>sp|Q0CL94|AMP2A_ASPTN Methionine aminopeptidase 2 homolog ATEG_05540 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_05540 PE=3 SV=1 Back     alignment and function description
>sp|Q55C21|AMPM2_DICDI Methionine aminopeptidase 2 OS=Dictyostelium discoideum GN=metap2 PE=3 SV=3 Back     alignment and function description
>sp|O60085|AMPM2_SCHPO Methionine aminopeptidase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fma2 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query635
358343277467 Methionine aminopeptidase [Medicago trun 0.577 0.785 0.825 0.0
345329858 817 PREDICTED: hypothetical protein LOC10008 0.732 0.569 0.648 0.0
307208555469 Methionine aminopeptidase 2 [Harpegnatho 0.582 0.788 0.816 0.0
383849575478 PREDICTED: methionine aminopeptidase 2-l 0.584 0.776 0.815 0.0
340723073472 PREDICTED: methionine aminopeptidase 2-l 0.584 0.786 0.815 0.0
350414028472 PREDICTED: methionine aminopeptidase 2-l 0.584 0.786 0.815 0.0
332024739474 Methionine aminopeptidase 2 [Acromyrmex 0.584 0.782 0.825 0.0
307185441474 Methionine aminopeptidase 2 [Camponotus 0.582 0.780 0.809 0.0
66526670474 PREDICTED: methionine aminopeptidase 2 [ 0.579 0.776 0.816 0.0
322790479484 hypothetical protein SINV_03863 [Solenop 0.584 0.766 0.819 0.0
>gi|358343277|ref|XP_003635731.1| Methionine aminopeptidase [Medicago truncatula] gi|355501666|gb|AES82869.1| Methionine aminopeptidase [Medicago truncatula] Back     alignment and taxonomy information
 Score =  667 bits (1720), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/367 (82%), Positives = 334/367 (91%)

Query: 269 QTTPPSIPVSQLYPDGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEARQ 328
           QT PP+IP+ +L+ DG +P+GQ M+YPT+ D RT KDRFTNEEK+A+DR  +D+YNE R 
Sbjct: 101 QTDPPTIPICELFSDGVYPIGQIMDYPTVNDSRTAKDRFTNEEKRALDRSESDIYNEVRL 160

Query: 329 AAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAH 388
           AAEAHRQ RKHM  WIKPGMTMI+I EELE  +R LI EDGLKAGLAFPTGCSRNHCAAH
Sbjct: 161 AAEAHRQTRKHMQQWIKPGMTMIQICEELENTARKLIKEDGLKAGLAFPTGCSRNHCAAH 220

Query: 389 YTPNNGDKTVLEFDDITKIDFGTHINGRIIDCAFTLAYNNKYDKLIEAVRDATNTGIKAA 448
           YTPN GD TVLE+DD+TKIDFGTHINGRIIDCAFTL++N KYDKLIEAVRDATNTGIKAA
Sbjct: 221 YTPNAGDPTVLEYDDVTKIDFGTHINGRIIDCAFTLSFNPKYDKLIEAVRDATNTGIKAA 280

Query: 449 GIDVPLCEVGAAIQEVMESYEVEIDGKTYQVKSIRNLNGHSIDSYRIHAGKTVPIVRGGE 508
           GIDVPLCE+GAAIQEVMESYEVE+DGKTYQVKSIRNLNGHSI  YRIHAGKTVPIV+GGE
Sbjct: 281 GIDVPLCEIGAAIQEVMESYEVELDGKTYQVKSIRNLNGHSISPYRIHAGKTVPIVKGGE 340

Query: 509 GTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLRLASSKSLLNTINKNFG 568
            T+MEENE+YAIETFGSTG+G VHDDMD SHYMKNF+A Y+PLRL SSKSLL+ INKNF 
Sbjct: 341 ATVMEENEYYAIETFGSTGRGQVHDDMDCSHYMKNFDAGYMPLRLQSSKSLLSVINKNFS 400

Query: 569 TLAFCKRWLDRAGCTKYQMALKDLCDKGIVEAYPPLCDIKGSYTAQFEHTIVLRPTCKEV 628
           TLAFCKRWLDRAGCTKYQMALKDLCDKGIV+AYPPLCD+KG YTAQFEHTI+LRPTCKEV
Sbjct: 401 TLAFCKRWLDRAGCTKYQMALKDLCDKGIVDAYPPLCDVKGCYTAQFEHTIMLRPTCKEV 460

Query: 629 ISRGDDY 635
           +SRGDDY
Sbjct: 461 VSRGDDY 467

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|345329858|ref|XP_001514935.2| PREDICTED: hypothetical protein LOC100084452 [Ornithorhynchus anatinus] Back     alignment and taxonomy information
>gi|307208555|gb|EFN85894.1| Methionine aminopeptidase 2 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|383849575|ref|XP_003700420.1| PREDICTED: methionine aminopeptidase 2-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|340723073|ref|XP_003399922.1| PREDICTED: methionine aminopeptidase 2-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350414028|ref|XP_003490183.1| PREDICTED: methionine aminopeptidase 2-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|332024739|gb|EGI64928.1| Methionine aminopeptidase 2 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307185441|gb|EFN71450.1| Methionine aminopeptidase 2 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|66526670|ref|XP_624161.1| PREDICTED: methionine aminopeptidase 2 [Apis mellifera] Back     alignment and taxonomy information
>gi|322790479|gb|EFZ15357.1| hypothetical protein SINV_03863 [Solenopsis invicta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query635
FB|FBgn0025117448 und "uninitiated" [Drosophila 0.577 0.819 0.770 2.8e-165
ZFIN|ZDB-GENE-030131-2172476 metap2b "methionyl aminopeptid 0.587 0.783 0.734 9.8e-159
UNIPROTKB|F8VQZ7477 METAP2 "Methionine aminopeptid 0.587 0.781 0.739 3e-157
UNIPROTKB|P50579478 METAP2 "Methionine aminopeptid 0.587 0.780 0.739 3e-157
UNIPROTKB|F8VRR3442 METAP2 "Methionine aminopeptid 0.587 0.843 0.739 3e-157
UNIPROTKB|F1N4Q2477 METAP2 "Methionine aminopeptid 0.587 0.781 0.739 3.8e-157
UNIPROTKB|E2R1P4478 METAP2 "Methionine aminopeptid 0.587 0.780 0.739 3.8e-157
UNIPROTKB|I3LSP1478 METAP2 "Methionine aminopeptid 0.587 0.780 0.739 3.8e-157
UNIPROTKB|Q3ZC89477 METAP2 "Methionine aminopeptid 0.587 0.781 0.737 6.2e-157
RGD|1560341442 RGD1560341 "similar to Methion 0.587 0.843 0.739 1e-156
FB|FBgn0025117 und "uninitiated" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1572 (558.4 bits), Expect = 2.8e-165, Sum P(2) = 2.8e-165
 Identities = 285/370 (77%), Positives = 330/370 (89%)

Query:   269 QTTPPSIPVSQLYPDGNFPVGQEMEYPTLKD---GRTGKDRFTNEEKKAIDRLHNDMYNE 325
             QT PP+IP+++LYPDGNFP G+ +E+PT KD    RT KDRFT+EEK+A+DR++ D+Y E
Sbjct:    79 QTDPPTIPIAKLYPDGNFPEGEIVEHPTPKDMPDDRTAKDRFTSEEKRALDRINTDIYQE 138

Query:   326 ARQAAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHC 385
              RQAAEAHRQ R++M  +IKPGMTMI+I EELE  +R LIGE+GL+AGLAFPTGCS NHC
Sbjct:   139 LRQAAEAHRQTRQYMQRYIKPGMTMIQICEELENTARRLIGENGLEAGLAFPTGCSLNHC 198

Query:   386 AAHYTPNNGDKTVLEFDDITKIDFGTHINGRIIDCAFTLAYNNKYDKLIEAVRDATNTGI 445
             AAHYTPN GD TVL++DD+ KIDFGTHI GRIIDCAFTL +NNKYDKL++AV++ATNTGI
Sbjct:   199 AAHYTPNAGDPTVLQYDDVCKIDFGTHIKGRIIDCAFTLTFNNKYDKLLQAVKEATNTGI 258

Query:   446 KAAGIDVPLCEVGAAIQEVMESYEVEIDGKTYQVKSIRNLNGHSIDSYRIHAGKTVPIVR 505
             + AGIDV LC++GAAIQEVMESYE+E+DGKTY +K+IRNLNGHSI  YRIHAGKTVPIV+
Sbjct:   259 REAGIDVRLCDIGAAIQEVMESYEIELDGKTYPIKAIRNLNGHSISPYRIHAGKTVPIVK 318

Query:   506 GGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLRLASSKSLLNTINK 565
             GGE T MEE+EFYAIETFGSTG+G+VHDDMD SHYMKNF+  ++PLRL SSK LL TINK
Sbjct:   319 GGESTRMEEDEFYAIETFGSTGRGLVHDDMDCSHYMKNFDLPFVPLRLQSSKQLLGTINK 378

Query:   566 NFGTLAFCKRWLDRAGCTKYQMALKDLCDKGIVEAYPPLCDIKGSYTAQFEHTIVLRPTC 625
             NFGTLAFCKRWLDRAG TKYQMALKDLCDKGIVEAYPPLCDIKG YTAQ+EHTI+LRPTC
Sbjct:   379 NFGTLAFCKRWLDRAGATKYQMALKDLCDKGIVEAYPPLCDIKGCYTAQYEHTIMLRPTC 438

Query:   626 KEVISRGDDY 635
             KEV+SRGDDY
Sbjct:   439 KEVVSRGDDY 448
GO:0004177 "aminopeptidase activity" evidence=ISS;NAS
GO:0008235 "metalloexopeptidase activity" evidence=IEA
GO:0009987 "cellular process" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA
ZFIN|ZDB-GENE-030131-2172 metap2b "methionyl aminopeptidase 2b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F8VQZ7 METAP2 "Methionine aminopeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P50579 METAP2 "Methionine aminopeptidase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F8VRR3 METAP2 "Methionine aminopeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1N4Q2 METAP2 "Methionine aminopeptidase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2R1P4 METAP2 "Methionine aminopeptidase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|I3LSP1 METAP2 "Methionine aminopeptidase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q3ZC89 METAP2 "Methionine aminopeptidase 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1560341 RGD1560341 "similar to Methionine aminopeptidase 2 (MetAP 2)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B6HTQ4AMP2A_PENCW3, ., 4, ., 1, 1, ., 1, 80.56380.54960.7949yesN/A
Q5B4X6AMP2A_EMENI3, ., 4, ., 1, 1, ., 1, 80.59040.57000.8080yesN/A
Q4WNT9AMP2A_ASPFU3, ., 4, ., 1, 1, ., 1, 80.59240.57000.7669yesN/A
A2QHX0AMP2A_ASPNC3, ., 4, ., 1, 1, ., 1, 80.59510.57000.8399yesN/A
Q3ZC89AMPM2_BOVIN3, ., 4, ., 1, 1, ., 1, 80.74380.57790.7693yesN/A
O60085AMPM2_SCHPO3, ., 4, ., 1, 1, ., 1, 80.58960.57160.8521yesN/A
P50579AMPM2_HUMAN3, ., 4, ., 1, 1, ., 1, 80.74650.57790.7677yesN/A
Q6CA79AMPM2_YARLI3, ., 4, ., 1, 1, ., 1, 80.53340.57790.7791yesN/A
C4R2P3AMPM2_PICPG3, ., 4, ., 1, 1, ., 1, 80.57300.55900.7924yesN/A
Q56Y85AMP2B_ARATH3, ., 4, ., 1, 1, ., 1, 80.66750.57480.8314yesN/A
Q55C21AMPM2_DICDI3, ., 4, ., 1, 1, ., 1, 80.61140.56530.8233yesN/A
B2B738AMPM2_PODAN3, ., 4, ., 1, 1, ., 1, 80.58170.57000.8134yesN/A
Q6BVB8AMPM2_DEBHA3, ., 4, ., 1, 1, ., 1, 80.56110.55900.8472yesN/A
O08663AMPM2_MOUSE3, ., 4, ., 1, 1, ., 1, 80.74650.57790.7677yesN/A
P38062AMPM2_RAT3, ., 4, ., 1, 1, ., 1, 80.74650.57790.7677yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.11.180.914
3rd Layer3.4.110.921

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query635
PTZ00053470 PTZ00053, PTZ00053, methionine aminopeptidase 2; P 0.0
cd01088291 cd01088, MetAP2, Methionine Aminopeptidase 2 1e-167
TIGR00501295 TIGR00501, met_pdase_II, methionine aminopeptidase 4e-94
PRK08671291 PRK08671, PRK08671, methionine aminopeptidase; Pro 2e-81
PTZ00053470 PTZ00053, PTZ00053, methionine aminopeptidase 2; P 1e-60
COG0024255 COG0024, Map, Methionine aminopeptidase [Translati 7e-50
cd01088291 cd01088, MetAP2, Methionine Aminopeptidase 2 2e-38
pfam00557208 pfam00557, Peptidase_M24, Metallopeptidase family 1e-31
cd01066207 cd01066, APP_MetAP, A family including aminopeptid 3e-23
TIGR00495389 TIGR00495, crvDNA_42K, 42K curved DNA binding prot 3e-22
COG0024255 COG0024, Map, Methionine aminopeptidase [Translati 7e-19
TIGR00501295 TIGR00501, met_pdase_II, methionine aminopeptidase 9e-19
PRK08671291 PRK08671, PRK08671, methionine aminopeptidase; Pro 1e-18
cd01086238 cd01086, MetAP1, Methionine Aminopeptidase 1 4e-18
pfam00557208 pfam00557, Peptidase_M24, Metallopeptidase family 5e-16
PRK12896255 PRK12896, PRK12896, methionine aminopeptidase; Rev 8e-13
PRK05716252 PRK05716, PRK05716, methionine aminopeptidase; Val 2e-12
cd01092208 cd01092, APP-like, Similar to Prolidase and Aminop 4e-12
COG0006384 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid 2e-09
cd01089228 cd01089, PA2G4-like, Related to aminopepdidase M, 2e-09
cd01089228 cd01089, PA2G4-like, Related to aminopepdidase M, 9e-09
cd01066207 cd01066, APP_MetAP, A family including aminopeptid 1e-08
TIGR00495389 TIGR00495, crvDNA_42K, 42K curved DNA binding prot 7e-08
TIGR00500247 TIGR00500, met_pdase_I, methionine aminopeptidase, 7e-08
PRK07281286 PRK07281, PRK07281, methionine aminopeptidase; Rev 4e-06
COG0006384 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid 8e-06
cd01092208 cd01092, APP-like, Similar to Prolidase and Aminop 1e-05
cd01087243 cd01087, Prolidase, Prolidase 1e-04
PRK12896255 PRK12896, PRK12896, methionine aminopeptidase; Rev 0.001
>gnl|CDD|240246 PTZ00053, PTZ00053, methionine aminopeptidase 2; Provisional Back     alignment and domain information 
 Score =  647 bits (1670), Expect = 0.0
 Identities = 243/418 (58%), Positives = 299/418 (71%), Gaps = 30/418 (7%)

Query: 243 KKKKKKKNKNKAAAATEEAPKNGIP-------------------------QQTTPPSIPV 277
           KKKKKKK K K            +P                         +QT PP+IPV
Sbjct: 58  KKKKKKKKKKKKNLGEAYDLAYDLPVVWSSAAFQDNSHIRKLGNWPEQEWKQTQPPTIPV 117

Query: 278 SQLYPDGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEARQAAEAHRQVR 337
           S+ + DG +PVG+  EYP          R ++EEK+ +++L  + Y + R+AAE HRQVR
Sbjct: 118 SKQFKDGEYPVGEIQEYPGEN-----SSRTSSEEKRELEKLSEEQYQDLRRAAEVHRQVR 172

Query: 338 KHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKT 397
           ++    IKPG+ +I+I E +E  SR LI  DGLK G AFPTGCS NHCAAHYTPN GDKT
Sbjct: 173 RYAQSVIKPGVKLIDICERIESKSRELIEADGLKCGWAFPTGCSLNHCAAHYTPNTGDKT 232

Query: 398 VLEFDDITKIDFGTHINGRIIDCAFTLAYNNKYDKLIEAVRDATNTGIKAAGIDVPLCEV 457
           VL +DD+ K+DFGTH+NGRIIDCAFT+A+N KYD L++A +DATNTGIK AGIDV L ++
Sbjct: 233 VLTYDDVCKLDFGTHVNGRIIDCAFTVAFNPKYDPLLQATKDATNTGIKEAGIDVRLSDI 292

Query: 458 GAAIQEVMESYEVEIDGKTYQVKSIRNLNGHSIDSYRIHAGKTVPIVRGGEGTLMEENEF 517
           GAAIQEV+ESYEVEI GKTY +KSIRNLNGHSI  Y IH GK+VPIV+GGE T MEE E 
Sbjct: 293 GAAIQEVIESYEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGGENTRMEEGEL 352

Query: 518 YAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLRLASSKSLLNTINKNFGTLAFCKRWL 577
           +AIETF STG+G V++D++ SHYMK+  A ++PLRL  +K LL  IN NFGTLAFC+RWL
Sbjct: 353 FAIETFASTGRGYVNEDLECSHYMKDPGAEFVPLRLPKAKQLLKHINTNFGTLAFCRRWL 412

Query: 578 DRAGCTKYQMALKDLCDKGIVEAYPPLCDIKGSYTAQFEHTIVLRPTCKEVISRGDDY 635
           DR G  ++ +ALK L D GIV  YPPLCD++GSYT+Q EHTI+LRPTCKEV+SRGDDY
Sbjct: 413 DRLGQDRHLLALKQLVDAGIVNPYPPLCDVRGSYTSQMEHTILLRPTCKEVLSRGDDY 470

Length = 470
>gnl|CDD|238521 cd01088, MetAP2, Methionine Aminopeptidase 2 Back     alignment and domain information
>gnl|CDD|129592 TIGR00501, met_pdase_II, methionine aminopeptidase, type II Back     alignment and domain information
>gnl|CDD|181534 PRK08671, PRK08671, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|240246 PTZ00053, PTZ00053, methionine aminopeptidase 2; Provisional Back     alignment and domain information
>gnl|CDD|223103 COG0024, Map, Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|238521 cd01088, MetAP2, Methionine Aminopeptidase 2 Back     alignment and domain information
>gnl|CDD|215993 pfam00557, Peptidase_M24, Metallopeptidase family M24 Back     alignment and domain information
>gnl|CDD|238514 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>gnl|CDD|129586 TIGR00495, crvDNA_42K, 42K curved DNA binding protein Back     alignment and domain information
>gnl|CDD|223103 COG0024, Map, Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|129592 TIGR00501, met_pdase_II, methionine aminopeptidase, type II Back     alignment and domain information
>gnl|CDD|181534 PRK08671, PRK08671, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|238519 cd01086, MetAP1, Methionine Aminopeptidase 1 Back     alignment and domain information
>gnl|CDD|215993 pfam00557, Peptidase_M24, Metallopeptidase family M24 Back     alignment and domain information
>gnl|CDD|237252 PRK12896, PRK12896, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|235576 PRK05716, PRK05716, methionine aminopeptidase; Validated Back     alignment and domain information
>gnl|CDD|238525 cd01092, APP-like, Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>gnl|CDD|223085 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|238522 cd01089, PA2G4-like, Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>gnl|CDD|238522 cd01089, PA2G4-like, Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>gnl|CDD|238514 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>gnl|CDD|129586 TIGR00495, crvDNA_42K, 42K curved DNA binding protein Back     alignment and domain information
>gnl|CDD|129591 TIGR00500, met_pdase_I, methionine aminopeptidase, type I Back     alignment and domain information
>gnl|CDD|180918 PRK07281, PRK07281, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|223085 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|238525 cd01092, APP-like, Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>gnl|CDD|238520 cd01087, Prolidase, Prolidase Back     alignment and domain information
>gnl|CDD|237252 PRK12896, PRK12896, methionine aminopeptidase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 635
PTZ00053470 methionine aminopeptidase 2; Provisional 100.0
KOG2775|consensus397 100.0
TIGR00501295 met_pdase_II methionine aminopeptidase, type II. M 100.0
TIGR00495389 crvDNA_42K 42K curved DNA binding protein. Protein 100.0
PRK08671291 methionine aminopeptidase; Provisional 100.0
cd01088291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 100.0
COG0024255 Map Methionine aminopeptidase [Translation, riboso 100.0
KOG2738|consensus369 100.0
KOG2776|consensus398 100.0
PLN03158396 methionine aminopeptidase; Provisional 100.0
PRK07281286 methionine aminopeptidase; Reviewed 100.0
PRK12897248 methionine aminopeptidase; Reviewed 100.0
PRK12318291 methionine aminopeptidase; Provisional 100.0
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 100.0
PRK12896255 methionine aminopeptidase; Reviewed 100.0
PRK05716252 methionine aminopeptidase; Validated 100.0
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 100.0
PRK09795361 aminopeptidase; Provisional 100.0
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 100.0
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 100.0
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 100.0
PRK10879438 proline aminopeptidase P II; Provisional 100.0
PRK15173323 peptidase; Provisional 100.0
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 100.0
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 100.0
PRK14575406 putative peptidase; Provisional 100.0
PRK14576405 putative endopeptidase; Provisional 100.0
PRK13607443 proline dipeptidase; Provisional 99.98
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 99.97
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 99.97
cd01091243 CDC68-like Related to aminopeptidase P and aminope 99.97
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 99.97
COG0024255 Map Methionine aminopeptidase [Translation, riboso 99.97
cd01066207 APP_MetAP A family including aminopeptidase P, ami 99.96
TIGR00501295 met_pdase_II methionine aminopeptidase, type II. M 99.96
PRK08671291 methionine aminopeptidase; Provisional 99.96
cd01088291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 99.95
TIGR00495389 crvDNA_42K 42K curved DNA binding protein. Protein 99.95
PRK12897248 methionine aminopeptidase; Reviewed 99.95
PRK09795361 aminopeptidase; Provisional 99.95
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 99.94
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 99.94
PRK07281286 methionine aminopeptidase; Reviewed 99.94
KOG2414|consensus488 99.94
PRK12896255 methionine aminopeptidase; Reviewed 99.93
PRK12318291 methionine aminopeptidase; Provisional 99.93
PLN03158396 methionine aminopeptidase; Provisional 99.93
PRK10879438 proline aminopeptidase P II; Provisional 99.93
KOG2737|consensus492 99.92
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 99.92
PRK05716252 methionine aminopeptidase; Validated 99.92
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 99.92
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 99.92
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 99.92
PRK15173323 peptidase; Provisional 99.91
KOG2738|consensus369 99.91
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 99.91
PRK14575406 putative peptidase; Provisional 99.91
PRK13607443 proline dipeptidase; Provisional 99.9
PRK14576405 putative endopeptidase; Provisional 99.9
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 99.9
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 99.89
cd01066207 APP_MetAP A family including aminopeptidase P, ami 99.89
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 99.88
PTZ00053470 methionine aminopeptidase 2; Provisional 99.86
KOG2414|consensus488 99.84
KOG2775|consensus397 99.81
cd01091243 CDC68-like Related to aminopeptidase P and aminope 99.8
KOG2737|consensus492 99.76
KOG2413|consensus606 99.73
KOG2776|consensus398 99.73
KOG1189|consensus 960 99.67
KOG2413|consensus606 99.06
COG5406 1001 Nucleosome binding factor SPN, SPT16 subunit [Tran 98.96
KOG1189|consensus 960 98.42
COG5406 1001 Nucleosome binding factor SPN, SPT16 subunit [Tran 97.25
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.4e-89  Score=744.09  Aligned_cols=354  Identities=60%  Similarity=1.021  Sum_probs=332.7

Q ss_pred             hhhhcCCCCCCCCceEecCCCCCCCCCccccChHHHHhhhhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHH
Q psy15498        100 LEQCGLNGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEARQAAEAHRQVRKHMMGWIKPGMTMIEIVEE  179 (635)
Q Consensus       100 ~~~~~~~~~~p~g~~~~~~~~~~~~~~~~r~t~~e~r~~~~~s~~Ei~~iR~Aaei~~~v~~~~~~~ikpG~te~eia~~  179 (635)
                      |++|||+|.||+|||++|.++     |++|+|++|+|+++++|++||+.||+||+||+++++++++.|+||||+.|||+.
T Consensus       117 ~~~~~~~~~~p~g~~~~~~~~-----~~~~~~~~e~~~~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~  191 (470)
T PTZ00053        117 VSKQFKDGEYPVGEIQEYPGE-----NSSRTSSEEKRELEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICER  191 (470)
T ss_pred             HHHhCCCCCCCcceEEecCcc-----ccccCCchhhCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence            899999999999999999863     679999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCCCceeeecCCcccCCCCCCCCCccccCCCeEEEEEEEEECCeehhhhhhcccchhhHhHhhh
Q psy15498        180 LEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHINGEEVAKKKKKKKNKNKAAAATE  259 (635)
Q Consensus       180 ie~~~r~l~~~~g~~~g~~Fpt~~s~n~~~aH~~P~~gd~~~L~~gDvv~iD~G~~~~Gy~sD~a~~~~~~~~~~~~a~~  259 (635)
                      +++.++++.++.|...+++||+++|+|+|++||+|+.||.++|++||+|+||||++||||++|+|||+            
T Consensus       192 ie~~ir~~~~~~G~~~g~aFPt~vS~N~~aaH~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv------------  259 (470)
T PTZ00053        192 IESKSRELIEADGLKCGWAFPTGCSLNHCAAHYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTV------------  259 (470)
T ss_pred             HHHHHHHHHHhcCCcccCCCCceeecCccccCCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEE------------
Confidence            99999998888887678999999999999999999988888999999999999999999999955432            


Q ss_pred             hcccCCCCccCCCCceeecccCCCCCcCccccccCCCcCCCCCCCcccChHHHHHhhhcCHHHHHHHHHHHHHHHHHHHH
Q psy15498        260 EAPKNGIPQQTTPPSIPVSQLYPDGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEARQAAEAHRQVRKH  339 (635)
Q Consensus       260 ~~~~~~~~~~~~~~t~~v~~~~~~~~f~~g~~~~~~~~~~~~~~~~~~ss~e~~~~~i~s~eEIe~~R~Aa~Ia~~al~~  339 (635)
                                      .++                                                             
T Consensus       260 ----------------~vg-------------------------------------------------------------  262 (470)
T PTZ00053        260 ----------------AFN-------------------------------------------------------------  262 (470)
T ss_pred             ----------------EeC-------------------------------------------------------------
Confidence                            110                                                             


Q ss_pred             HHHhccCCCcHHHHHHHHHHHHHHHHHhcCCcccccCCCcccCCCCcccCCCCCCCCccccCCCEEEeecceEEccEEee
Q psy15498        340 MMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHINGRIID  419 (635)
Q Consensus       340 ~~~~ikpGvt~~EI~~~Ie~~~~~~i~~~G~~~g~~fp~~isin~~~~H~~P~~~d~~~L~~GdVV~ID~G~~~~GY~aD  419 (635)
                                                                                                      
T Consensus       263 --------------------------------------------------------------------------------  262 (470)
T PTZ00053        263 --------------------------------------------------------------------------------  262 (470)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeEEEechhHHHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHHhccccccCcccceeeecccccccccccccccCC
Q psy15498        420 CAFTLAYNNKYDKLIEAVRDATNTGIKAAGIDVPLCEVGAAIQEVMESYEVEIDGKTYQVKSIRNLNGHSIDSYRIHAGK  499 (635)
Q Consensus       420 ~aRT~~v~~e~~~l~~a~~ea~~aai~~ikPG~~~~dI~~ai~~~~~~~G~e~~g~~f~~~~v~~~~GHgIG~l~ihe~p  499 (635)
                              ++++++++++++|+++||++++||++++||+++++++++++||+++|++|.|++++|++|||||+|.+|++|
T Consensus       263 --------~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k  334 (470)
T PTZ00053        263 --------PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIESYEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGK  334 (470)
T ss_pred             --------HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCcccccccccCCcccCCCCccccCCC
Confidence                    123468888999999999999999999999999999999999998999998999999999999977999999


Q ss_pred             ccceeeCCCCccccCCcEEEEcceEeCCCCceEeCCccceeeecccccccchhhhhhHHHHHHHHhhcCCCccccccccc
Q psy15498        500 TVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLRLASSKSLLNTINKNFGTLAFCKRWLDR  579 (635)
Q Consensus       500 ~Ip~~~~~~~~~Le~GMVfaIEP~i~~G~g~v~~~~~~~iy~~~~~~~~~~lk~~~~r~~l~~i~~~~~~~PF~~rwl~~  579 (635)
                      .+|++.+++..+|++||||+||||+++|.|+++++.+++||+++.+..+|+||+++||+||++|+++|++||||.|||++
T Consensus       335 ~iP~v~~~~~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY~~~~~~~~~~lk~~~ar~ll~~I~~~f~tlPF~~R~l~~  414 (470)
T PTZ00053        335 SVPIVKGGENTRMEEGELFAIETFASTGRGYVNEDLECSHYMKDPGAEFVPLRLPKAKQLLKHINTNFGTLAFCRRWLDR  414 (470)
T ss_pred             cCCeeCCCCCCEecCCCEEEEcceeeCCCCeEecCCCceeeeEcCcCCcCCCCCHHHHHHHHHHHHHCCCCCcchhhhhc
Confidence            99999888889999999999999999999999999999999998887778999999999999999999999999999998


Q ss_pred             ccchhhhHHHHHHHhcCCcccCCcEEccCCCeeEEEEEEEEEcCCCcEEcCCCCCC
Q psy15498        580 AGCTKYQMALKDLCDKGIVEAYPPLCDIKGSYTAQFEHTIVLRPTCKEVISRGDDY  635 (635)
Q Consensus       580 ~~~~~~~~~l~el~~~~~l~~yp~l~~~~g~~vAqfEhTvlVt~~G~~vlT~~~~~  635 (635)
                      .++.+++|||++|++||+|.+||+|++++|++||||||||||+++|.+|||+||||
T Consensus       415 ~~~~~~~~gl~~lv~~giv~~Yp~L~e~~G~~VAQfehTvll~p~~~~vis~g~dy  470 (470)
T PTZ00053        415 LGQDRHLLALKQLVDAGIVNPYPPLCDVRGSYTSQMEHTILLRPTCKEVLSRGDDY  470 (470)
T ss_pred             cchhHHHHHHHHHHHCCCcccCCccCccCCCEEeEEEEEEEECCCCCEecCCCCCC
Confidence            77789999999999999999999999999999999999999999999999999999

>KOG2775|consensus Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG2738|consensus Back     alignment and domain information
>KOG2776|consensus Back     alignment and domain information
>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>KOG2414|consensus Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>KOG2737|consensus Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>KOG2738|consensus Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>KOG2414|consensus Back     alignment and domain information
>KOG2775|consensus Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>KOG2737|consensus Back     alignment and domain information
>KOG2413|consensus Back     alignment and domain information
>KOG2776|consensus Back     alignment and domain information
>KOG1189|consensus Back     alignment and domain information
>KOG2413|consensus Back     alignment and domain information
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] Back     alignment and domain information
>KOG1189|consensus Back     alignment and domain information
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query635
1b6a_A478 Human Methionine Aminopeptidase 2 Complexed With Tn 1e-167
1qzy_A478 Human Methionine Aminopeptidase In Complex With Ben 1e-167
1b59_A370 Complex Of Human Methionine Aminopeptidase-2 Comple 1e-167
1r58_A369 Crystal Structure Of Metap2 Complexed With A357300 1e-166
3fm3_A358 Crystal Structure Of An Encephalitozoon Cuniculi Me 5e-65
2dfi_A301 Crystal Structure Of Pf-Map(1-292)-C Length = 301 2e-45
1xgs_A295 Methionine Aminopeptidase From Hyperthermophile Pyr 3e-45
2q8k_A401 The Crystal Structure Of Ebp1 Length = 401 9e-17
3j2i_A394 Structure Of Late Pre-60s Ribosomal Subunits With N 9e-17
2v6c_A353 Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) 2e-16
3tb5_A264 Crystal Structure Of The Enterococcus Faecalis Meth 8e-09
4ipa_A423 Structure Of A Thermophilic Arx1 Length = 423 2e-04
3q6d_A356 Xaa-Pro Dipeptidase From Bacillus Anthracis. Length 5e-04
>pdb|1B6A|A Chain A, Human Methionine Aminopeptidase 2 Complexed With Tnp-470 Length = 478 Back     alignment and structure 
Iteration: 1

 Score =  586 bits (1510), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 274/367 (74%), Positives = 315/367 (85%)
Query: 269 QTTPPSIPVSQLYPDGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEARQ 328
           QT PPS+P+  LYP+G FP GQE EYP  +DGRT   R T+EEKKA+D+   +++N+ R+
Sbjct: 112 QTDPPSVPICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQASEEIWNDFRE 171
Query: 329 AAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAH 388
           AAEAHRQVRK++M WIKPGMTMIEI E+LE  SR LI E+GL AGLAFPTGCS N+CAAH
Sbjct: 172 AAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGCSLNNCAAH 231
Query: 389 YTPNNGDKTVLEFDDITKIDFGTHINGRIIDCAFTLAYNNKYDKLIEAVRDATNTGIKAA 448
           YTPN GD TVL++DDI KIDFGTHI+GRIIDCAFT+ +N KYD L++AV+DATNTGIK A
Sbjct: 232 YTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFNPKYDTLLKAVKDATNTGIKCA 291
Query: 449 GIDVPLCEVGAAIQEVMESYEVEIDGKTYQVKSIRNLNGHSIDSYRIHAGKTVPIVRGGE 508
           GIDV LC+VG AIQEVMESYEVEIDGKTYQVK IRNLNGHSI  YRIHAGKTVPIV+GGE
Sbjct: 292 GIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQYRIHAGKTVPIVKGGE 351
Query: 509 GTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLRLASSKSLLNTINKNFG 568
            T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+RL  +K LLN IN+NFG
Sbjct: 352 ATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFG 411
Query: 569 TLAFCKRWLDRAGCTKYQMALKDLCDKGIVEAYPPLCDIKGSYTAQFEHTIVLRPTCKEV 628
           TLAFC+RWLDR G +KY MALK+LCD GIV+ YPPLCDIKGSYTAQFEHTI+LRPTCKEV
Sbjct: 412 TLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEV 471
Query: 629 ISRGDDY 635
           +SRGDDY
Sbjct: 472 VSRGDDY 478
>pdb|1QZY|A Chain A, Human Methionine Aminopeptidase In Complex With Bengamide Inhibitor Laf153 And Cobalt Length = 478 Back     alignment and structure
>pdb|1B59|A Chain A, Complex Of Human Methionine Aminopeptidase-2 Complexed With Ovalicin Length = 370 Back     alignment and structure
>pdb|1R58|A Chain A, Crystal Structure Of Metap2 Complexed With A357300 Length = 369 Back     alignment and structure
>pdb|3FM3|A Chain A, Crystal Structure Of An Encephalitozoon Cuniculi Methionine Aminopeptidase Type 2 Length = 358 Back     alignment and structure
>pdb|2DFI|A Chain A, Crystal Structure Of Pf-Map(1-292)-C Length = 301 Back     alignment and structure
>pdb|1XGS|A Chain A, Methionine Aminopeptidase From Hyperthermophile Pyrococcus Furiosus Length = 295 Back     alignment and structure
>pdb|2Q8K|A Chain A, The Crystal Structure Of Ebp1 Length = 401 Back     alignment and structure
>pdb|3J2I|A Chain A, Structure Of Late Pre-60s Ribosomal Subunits With Nuclear Export Factor Arx1 Bound At The Peptide Exit Tunnel Length = 394 Back     alignment and structure
>pdb|2V6C|A Chain A, Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) Length = 353 Back     alignment and structure
>pdb|3TB5|A Chain A, Crystal Structure Of The Enterococcus Faecalis Methionine Aminopeptidase Apo Form Length = 264 Back     alignment and structure
>pdb|4IPA|A Chain A, Structure Of A Thermophilic Arx1 Length = 423 Back     alignment and structure
>pdb|3Q6D|A Chain A, Xaa-Pro Dipeptidase From Bacillus Anthracis. Length = 356 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query635
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 1e-180
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 7e-62
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 1e-160
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 7e-37
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 1e-138
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 5e-31
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 1e-127
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 3e-33
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 2e-11
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 1e-10
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 3e-06
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 1e-09
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 1e-09
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 5e-05
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 1e-09
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 5e-09
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 1e-05
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 6e-09
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 1e-05
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 7e-09
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 1e-05
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 9e-09
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 1e-05
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 1e-08
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 4e-05
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
3mx6_A262 Methionine aminopeptidase; seattle structural geno 1e-05
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 1e-05
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 2e-05
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 3e-05
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 3e-05
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 1e-04
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478 Back     alignment and structure
 Score =  519 bits (1338), Expect = e-180
 Identities = 286/420 (68%), Positives = 335/420 (79%), Gaps = 11/420 (2%)

Query: 216 NGDKTVLEFDDITKIDFGTHINGEEVAKKKKKKKNKNKAAAATEEAPKNGIPQQTTPPSI 275
             +++ LE  +  + D     +G+    KKKKKK K +           G   QT PPS+
Sbjct: 70  QLERSALEDKERDEDDEDGDGDGDGATGKKKKKKKKKR-----------GPKVQTDPPSV 118

Query: 276 PVSQLYPDGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEARQAAEAHRQ 335
           P+  LYP+G FP GQE EYP  +DGRT   R T+EEKKA+D+   +++N+ R+AAEAHRQ
Sbjct: 119 PICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQASEEIWNDFREAAEAHRQ 178

Query: 336 VRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGD 395
           VRK++M WIKPGMTMIEI E+LE  SR LI E+GL AGLAFPTGCS N+CAAHYTPN GD
Sbjct: 179 VRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGCSLNNCAAHYTPNAGD 238

Query: 396 KTVLEFDDITKIDFGTHINGRIIDCAFTLAYNNKYDKLIEAVRDATNTGIKAAGIDVPLC 455
            TVL++DDI KIDFGTHI+GRIIDCAFT+ +N KYD L++AV+DATNTGIK AGIDV LC
Sbjct: 239 TTVLQYDDICKIDFGTHISGRIIDCAFTVTFNPKYDTLLKAVKDATNTGIKCAGIDVRLC 298

Query: 456 EVGAAIQEVMESYEVEIDGKTYQVKSIRNLNGHSIDSYRIHAGKTVPIVRGGEGTLMEEN 515
           +VG AIQEVMESYEVEIDGKTYQVK IRNLNGHSI  YRIHAGKTVPIV+GGE T MEE 
Sbjct: 299 DVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQYRIHAGKTVPIVKGGEATRMEEG 358

Query: 516 EFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLRLASSKSLLNTINKNFGTLAFCKR 575
           E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+RL  +K LLN IN+NFGTLAFC+R
Sbjct: 359 EVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRR 418

Query: 576 WLDRAGCTKYQMALKDLCDKGIVEAYPPLCDIKGSYTAQFEHTIVLRPTCKEVISRGDDY 635
           WLDR G +KY MALK+LCD GIV+ YPPLCDIKGSYTAQFEHTI+LRPTCKEV+SRGDDY
Sbjct: 419 WLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVSRGDDY 478
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478 Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295 Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295 Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Length = 401 Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Length = 401 Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Length = 286 Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Length = 402 Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Length = 402 Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Length = 262 Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Length = 401 Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Length = 401 Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Length = 264 Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Length = 356 Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Length = 356 Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Length = 356 Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Length = 356 Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Length = 351 Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Length = 351 Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Length = 359 Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Length = 359 Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Length = 378 Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Length = 378 Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Length = 252 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Length = 262 Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Length = 368 Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A Length = 285 Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Length = 444 Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Length = 329 Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Length = 263 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query635
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 100.0
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 100.0
3fm3_A358 Methionine aminopeptidase 2; metap2, structural ge 100.0
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 100.0
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 100.0
4b6a_t 614 Probable metalloprotease ARX1; large ribosomal sub 100.0
4fuk_A337 Methionine aminopeptidase; structural genomics con 100.0
3mx6_A262 Methionine aminopeptidase; seattle structural geno 100.0
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 100.0
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 100.0
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 100.0
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 100.0
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 100.0
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 100.0
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 100.0
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 100.0
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 100.0
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 100.0
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 100.0
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 100.0
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 100.0
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 100.0
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 100.0
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 100.0
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 100.0
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 100.0
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 100.0
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 100.0
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 100.0
3fm3_A358 Methionine aminopeptidase 2; metap2, structural ge 100.0
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 100.0
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 100.0
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 100.0
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 100.0
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 99.97
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 99.95
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 99.95
3mx6_A262 Methionine aminopeptidase; seattle structural geno 99.95
4fuk_A337 Methionine aminopeptidase; structural genomics con 99.95
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 99.95
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 99.95
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 99.95
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 99.94
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 99.94
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 99.94
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 99.94
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 99.94
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 99.94
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 99.94
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 99.94
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 99.94
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 99.94
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 99.94
4b6a_t614 Probable metalloprotease ARX1; large ribosomal sub 99.94
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 99.94
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 99.93
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 99.93
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 99.93
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 99.92
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 99.92
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 99.92
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 99.9
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 99.9
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 99.87
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 99.86
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 99.83
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure
Probab=100.00  E-value=5.3e-88  Score=740.47  Aligned_cols=368  Identities=71%  Similarity=1.136  Sum_probs=322.7

Q ss_pred             CCCCCCCCCCchhhhhhhhcCCCCCCCCceEecCCCCCCCCCccccChHHHHhhhhCCHHHHHHHHHHHHHHHHHHHHHH
Q psy15498         85 AAADVPIDGNGIAEQLEQCGLNGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEARQAAEAHRQVRKHMM  164 (635)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~r~t~~e~r~~~~~s~~Ei~~iR~Aaei~~~v~~~~~  164 (635)
                      .|+.||+.    |  |++|||+|.||+|||++|+...+.+.+.+|+|++|+|.+..+|++||+.||+|++|++++++++.
T Consensus       111 ~~~~~~~~----~--~~~~~~~~~~p~g~~~~~~~~~~~~~~~~r~t~eelR~i~iKs~~EIe~mR~A~~Ia~~al~~~~  184 (478)
T 1b6a_A          111 VQTDPPSV----P--ICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQASEEIWNDFREAAEAHRQVRKYVM  184 (478)
T ss_dssp             CCCSSCCS----C--HHHHSTTSCCCCCEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCC----c--HHHhCCCCCCCCceEEecccccccccccccCCHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            34555554    3  89999999999999999953124445569999999999999999999999999999999999999


Q ss_pred             HhcCCCCcHHHHHHHHHHHHHHhcCCCCCCCCCCCceeeecCCcccCCCCCCCCCccccCCCeEEEEEEEEECCeehhhh
Q psy15498        165 GWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHINGEEVAKK  244 (635)
Q Consensus       165 ~~ikpG~te~eia~~ie~~~r~l~~~~g~~~g~~Fpt~~s~n~~~aH~~P~~gd~~~L~~gDvv~iD~G~~~~Gy~sD~a  244 (635)
                      +.|+||||+.|||+.+++.+++++.+.|...+++||+++|+|++++||+|+.+|.++|++||+|+||+|++|+||++|++
T Consensus       185 ~~ikpGvTe~ELa~~le~~~~~~i~~~Ga~~g~~FP~ivSvN~~v~Hg~P~~~d~r~Lk~GDiV~ID~G~~~dGY~sD~t  264 (478)
T 1b6a_A          185 SWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGCSLNNCAAHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCA  264 (478)
T ss_dssp             HHCCTTSBHHHHHHHHHHHHHHHHTCBTTTEEEEEEEEEEETTEEECCCCCTTCCCBCCTTCCEEEEEEEEETTEEEEEE
T ss_pred             hhcCCCCcHHHHHHHHHHHHHHHHHhcCCcccCCCCeEEECCCccccCCCCcccCccccCCCeEEEEEEEEECCEEEEEE
Confidence            99999999999999999999998777775457899999999999999999876668899999999999999999999943


Q ss_pred             hhcccchhhHhHhhhhcccCCCCccCCCCceeecccCCCCCcCccccccCCCcCCCCCCCcccChHHHHHhhhcCHHHHH
Q psy15498        245 KKKKKNKNKAAAATEEAPKNGIPQQTTPPSIPVSQLYPDGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYN  324 (635)
Q Consensus       245 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~t~~v~~~~~~~~f~~g~~~~~~~~~~~~~~~~~~ss~e~~~~~i~s~eEIe  324 (635)
                      |                            |++                                                
T Consensus       265 R----------------------------T~~------------------------------------------------  268 (478)
T 1b6a_A          265 F----------------------------TVT------------------------------------------------  268 (478)
T ss_dssp             E----------------------------EEC------------------------------------------------
T ss_pred             E----------------------------EEE------------------------------------------------
Confidence            3                            210                                                


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHhcCCcccccCCCcccCCCCcccCCCCCCCCccccCCCE
Q psy15498        325 EARQAAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDI  404 (635)
Q Consensus       325 ~~R~Aa~Ia~~al~~~~~~ikpGvt~~EI~~~Ie~~~~~~i~~~G~~~g~~fp~~isin~~~~H~~P~~~d~~~L~~GdV  404 (635)
                                                                                                      
T Consensus       269 --------------------------------------------------------------------------------  268 (478)
T 1b6a_A          269 --------------------------------------------------------------------------------  268 (478)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEeecceEEccEEeeeeeEEEechhHHHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHHhccccccCcccceeeecc
Q psy15498        405 TKIDFGTHINGRIIDCAFTLAYNNKYDKLIEAVRDATNTGIKAAGIDVPLCEVGAAIQEVMESYEVEIDGKTYQVKSIRN  484 (635)
Q Consensus       405 V~ID~G~~~~GY~aD~aRT~~v~~e~~~l~~a~~ea~~aai~~ikPG~~~~dI~~ai~~~~~~~G~e~~g~~f~~~~v~~  484 (635)
                                           |+++++++++++++|++++|++++||++++||+++++++++++||.+.+..|.|++++|
T Consensus       269 ---------------------Vg~e~~~L~eav~eA~~aaI~~~kPG~~~~dI~~ai~~~i~~~G~~l~g~~~~~~~v~h  327 (478)
T 1b6a_A          269 ---------------------FNPKYDTLLKAVKDATNTGIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRN  327 (478)
T ss_dssp             ---------------------SSGGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHTCEEEETTEEEECEECTT
T ss_pred             ---------------------eCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCcccccccceeecC
Confidence                                 01245689999999999999999999999999999999999999876677777778999


Q ss_pred             cccccccccccccCCccceeeCCCCccccCCcEEEEcceEeCCCCceEeCCccceeeecccccccchhhhhhHHHHHHHH
Q psy15498        485 LNGHSIDSYRIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLRLASSKSLLNTIN  564 (635)
Q Consensus       485 ~~GHgIG~l~ihe~p~Ip~~~~~~~~~Le~GMVfaIEP~i~~G~g~v~~~~~~~iy~~~~~~~~~~lk~~~~r~~l~~i~  564 (635)
                      ++|||||.+.+||+|.+|++.++.+.+|+||||||||||++.|.|.+.++.+++||+++.+...|+||+++||+||++|+
T Consensus       328 ~~GHGIGGl~iHE~P~vP~~~~~~~~~Le~GMVftIEP~i~~G~G~~~ed~~~~iy~~~~d~~~~~lk~~~ar~ll~~I~  407 (478)
T 1b6a_A          328 LNGHSIGQYRIHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVIN  407 (478)
T ss_dssp             CEEEEEBTTBSCCSCEEESSSSCCCCBCCTTCEEEEEEEEESSCSCCEECSCCCEEEECTTCCCCCCCSHHHHHHHHHHH
T ss_pred             cceeCCCCccccCCCccceecCCCCCEeCCCCEEEEeCeeECCCCEEEECCceeEEeecccccccccccHHHHHHHHHHH
Confidence            99999943799999999999888889999999999999999999888888899999998776678999999999999999


Q ss_pred             hhcCCCcccccccccccchhhhHHHHHHHhcCCcccCCcEEccCCCeeEEEEEEEEEcCCCcEEcCCCCCC
Q psy15498        565 KNFGTLAFCKRWLDRAGCTKYQMALKDLCDKGIVEAYPPLCDIKGSYTAQFEHTIVLRPTCKEVISRGDDY  635 (635)
Q Consensus       565 ~~~~~~PF~~rwl~~~~~~~~~~~l~el~~~~~l~~yp~l~~~~g~~vAqfEhTvlVt~~G~~vlT~~~~~  635 (635)
                      ++|++||||.||+++|+.++++|||++|++||||.+||||++++|++|||||||||||++|++|||.++||
T Consensus       408 ~~f~tlpF~~rw~d~~~~~~~~~gl~~l~~~g~v~~yp~l~t~dg~~~AQfEHTvlvt~~g~evlT~~~d~  478 (478)
T 1b6a_A          408 ENFGTLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVSRGDDY  478 (478)
T ss_dssp             HHTTTSCEEHHHHHHTTCCSCHHHHHHHHHTTSEEEECCEECSTTCCEEEEEEEEEECSSCEEETTCCSCC
T ss_pred             HhcCCCCccchhhcccchhHHHHHHHHHHHCCCcccCCceEcCCCCEEeeEEEEEEECCCccEEeCCCCCC
Confidence            99999999999999998899999999999999999999999999999999999999999999999999999
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} Back     alignment and structure
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 635
d1b6aa2295 d.127.1.1 (A:110-374,A:449-478) Methionine aminope 2e-61
d1b6aa2295 d.127.1.1 (A:110-374,A:449-478) Methionine aminope 2e-29
d1b6aa2295 d.127.1.1 (A:110-374,A:449-478) Methionine aminope 2e-07
d1b6aa174 a.4.5.25 (A:375-448) Methionine aminopeptidase, in 3e-34
d1xgsa177 a.4.5.25 (A:195-271) Methionine aminopeptidase, in 5e-24
d2gg2a1262 d.127.1.1 (A:3-264) Methionine aminopeptidase {Esc 8e-19
d2gg2a1262 d.127.1.1 (A:3-264) Methionine aminopeptidase {Esc 2e-09
d1o0xa_249 d.127.1.1 (A:) Methionine aminopeptidase {Thermoto 7e-13
d1o0xa_249 d.127.1.1 (A:) Methionine aminopeptidase {Thermoto 3e-04
d1xgsa2218 d.127.1.1 (A:1-194,A:272-295) Methionine aminopept 8e-13
d1xgsa2218 d.127.1.1 (A:1-194,A:272-295) Methionine aminopept 1e-06
d1qxya_249 d.127.1.1 (A:) Methionine aminopeptidase {Staphylo 4e-10
d1qxya_249 d.127.1.1 (A:) Methionine aminopeptidase {Staphylo 1e-06
d1pv9a2221 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal 1e-05
d1chma2246 d.127.1.1 (A:157-402) Creatinase, catalytic (C-ter 3e-04
d1chma2246 d.127.1.1 (A:157-402) Creatinase, catalytic (C-ter 3e-04
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  204 bits (519), Expect = 2e-61
 Identities = 195/266 (73%), Positives = 223/266 (83%)

Query: 269 QTTPPSIPVSQLYPDGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEARQ 328
           QT PPS+P+  LYP+G FP GQE EYP  +DGRT   R T+EEKKA+D+   +++N+ R+
Sbjct: 3   QTDPPSVPICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQASEEIWNDFRE 62

Query: 329 AAEAHRQVRKHMMGWIKPGMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAH 388
           AAEAHRQVRK++M WIKPGMTMIEI E+LE  SR LI E+GL AGLAFPTGCS N+CAAH
Sbjct: 63  AAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGCSLNNCAAH 122

Query: 389 YTPNNGDKTVLEFDDITKIDFGTHINGRIIDCAFTLAYNNKYDKLIEAVRDATNTGIKAA 448
           YTPN GD TVL++DDI KIDFGTHI+GRIIDCAFT+ +N KYD L++AV+DATNTGIK A
Sbjct: 123 YTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFNPKYDTLLKAVKDATNTGIKCA 182

Query: 449 GIDVPLCEVGAAIQEVMESYEVEIDGKTYQVKSIRNLNGHSIDSYRIHAGKTVPIVRGGE 508
           GIDV LC+VG AIQEVMESYEVEIDGKTYQVK IRNLNGHSI  YRIHAGKTVPIV+GGE
Sbjct: 183 GIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQYRIHAGKTVPIVKGGE 242

Query: 509 GTLMEENEFYAIETFGSTGKGMVHDD 534
            T MEE E YAIETFGSTGKG+V   
Sbjct: 243 ATRMEEGEVYAIETFGSTGKGVVDIK 268
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure
>d1b6aa1 a.4.5.25 (A:375-448) Methionine aminopeptidase, insert domain {Human (Homo sapiens) [TaxId: 9606]} Length = 74 Back     information, alignment and structure
>d1xgsa1 a.4.5.25 (A:195-271) Methionine aminopeptidase, insert domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 77 Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Length = 262 Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Length = 262 Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Length = 249 Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Length = 249 Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 218 Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 218 Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Length = 249 Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Length = 249 Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 221 Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Length = 246 Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Length = 246 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query635
d1b6aa2295 Methionine aminopeptidase {Human (Homo sapiens) [T 100.0
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 100.0
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 100.0
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 100.0
d1b6aa2295 Methionine aminopeptidase {Human (Homo sapiens) [T 100.0
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 100.0
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 100.0
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 100.0
d2v3za2264 Aminopeptidase P, C-terminal domain {Escherichia c 100.0
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 99.95
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 99.93
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 99.92
d2v3za2264 Aminopeptidase P, C-terminal domain {Escherichia c 99.91
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 99.91
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 99.9
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 99.9
d1b6aa174 Methionine aminopeptidase, insert domain {Human (H 99.75
d1xgsa177 Methionine aminopeptidase, insert domain {Archaeon 99.7
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-52  Score=436.34  Aligned_cols=294  Identities=73%  Similarity=1.160  Sum_probs=256.4

Q ss_pred             CccCCCCceeecccCCCCCcCccccccCCCcCCCCCCCcccChHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy15498        267 PQQTTPPSIPVSQLYPDGNFPVGQEMEYPTLKDGRTGKDRFTNEEKKAIDRLHNDMYNEARQAAEAHRQVRKHMMGWIKP  346 (635)
Q Consensus       267 ~~~~~~~t~~v~~~~~~~~f~~g~~~~~~~~~~~~~~~~~~ss~e~~~~~i~s~eEIe~~R~Aa~Ia~~al~~~~~~ikp  346 (635)
                      |.||.|||+||.++|+++.||.|+...|+...+.....+|.+++|.+.+++++++||+.||+|++|++++++++.+.++|
T Consensus         1 ~~~~~pp~~~~~~~f~~~~~p~g~~~~~~~~~~~~~~~~r~~~~e~r~~~~~~~~ei~~mR~Aa~Ia~~~~~~~~~~i~p   80 (295)
T d1b6aa2           1 KVQTDPPSVPICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQASEEIWNDFREAAEAHRQVRKYVMSWIKP   80 (295)
T ss_dssp             CCCCSSCCSCHHHHSTTSCCCCCEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred             CCCCCCCCcchhhhCcCCCCCCCceecccccccchhhhhcCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            46899999999999999999999988887666666778899999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHHHHHHHHHHhcCCcccccCCCcccCCCCcccCCCCCCCCccccCCCEEEeecceEEccEEeeeeeEEEe
Q psy15498        347 GMTMIEIVEELEKYSRLLIGEDGLKAGLAFPTGCSRNHCAAHYTPNNGDKTVLEFDDITKIDFGTHINGRIIDCAFTLAY  426 (635)
Q Consensus       347 Gvt~~EI~~~Ie~~~~~~i~~~G~~~g~~fp~~isin~~~~H~~P~~~d~~~L~~GdVV~ID~G~~~~GY~aD~aRT~~v  426 (635)
                      |+|+.||++.++..+++.+.+.++..+++||+++++|...+||.|...++++|++||+|+||+|+.++||++|++|||++
T Consensus        81 G~te~el~~~~e~~~~~~g~~~~~~~~~afp~~~~~n~~~~H~~p~~~~~~~l~~GD~v~iD~g~~~~gY~sD~trT~~~  160 (295)
T d1b6aa2          81 GMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGCSLNNCAAHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTF  160 (295)
T ss_dssp             TSBHHHHHHHHHHHHHHHHTCBTTTEEEEEEEEEEETTEEECCCCCTTCCCBCCTTCCEEEEEEEEETTEEEEEEEEECS
T ss_pred             CCcHHHHHHHHHHHHHHhccccCcccccCCcccccccceecccccccccchhccCCcceEEEeeeccccccccceeeeee
Confidence            99999999999999999887777777789999999999999999976667999999999999999999999999999999


Q ss_pred             chhHHHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHHhccccccCcccceeeecccccccccccccccC-Cccceee
Q psy15498        427 NNKYDKLIEAVRDATNTGIKAAGIDVPLCEVGAAIQEVMESYEVEIDGKTYQVKSIRNLNGHSIDSYRIHAG-KTVPIVR  505 (635)
Q Consensus       427 ~~e~~~l~~a~~ea~~aai~~ikPG~~~~dI~~ai~~~~~~~G~e~~g~~f~~~~v~~~~GHgIG~l~ihe~-p~Ip~~~  505 (635)
                      ++....+++++++++++++++++||++..+++.+++++++.++.+.....|++.++.+++||++|+ .+|+. +.+|.+.
T Consensus       161 g~~~~~~~~~~~~~~~~a~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gHgiG~-~~~~~~~~~~~~~  239 (295)
T d1b6aa2         161 NPKYDTLLKAVKDATNTGIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQ-YRIHAGKTVPIVK  239 (295)
T ss_dssp             SGGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHTCEEEETTEEEECEECTTCEEEEEBT-TBSCCSCEEESSS
T ss_pred             ccchhHHHHHHHHHhhhhhhcccccccccchHHHHHHHHHhhhhhhhhccCcccceeccccccCcc-ccccccccccccc
Confidence            888999999999999999999999999999999999999998877777778888899999999995 55554 4556677


Q ss_pred             CCCCccccCCcEEEEcceEeCCCCceEeCCccceeeecccccccchhhhhhHHHHHHHHhhcCCCcccccccccccchhh
Q psy15498        506 GGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLRLASSKSLLNTINKNFGTLAFCKRWLDRAGCTKY  585 (635)
Q Consensus       506 ~~~~~~Le~GMVfaIEP~i~~G~g~v~~~~~~~iy~~~~~~~~~~lk~~~~r~~l~~i~~~~~~~PF~~rwl~~~~~~~~  585 (635)
                      ++...+|+|||||||||++++|.|                                                        
T Consensus       240 ~~~~~~Le~GmV~tIEP~i~~g~g--------------------------------------------------------  263 (295)
T d1b6aa2         240 GGEATRMEEGEVYAIETFGSTGKG--------------------------------------------------------  263 (295)
T ss_dssp             SCCCCBCCTTCEEEEEEEEESSCS--------------------------------------------------------
T ss_pred             CCCCCEeCCCCEEEEeCeeeCCCe--------------------------------------------------------
Confidence            888889999999999999987643                                                        


Q ss_pred             hHHHHHHHhcCCcccCCcEEccCCCeeEEEEEEEEEcCCCcEEcCCCCCC
Q psy15498        586 QMALKDLCDKGIVEAYPPLCDIKGSYTAQFEHTIVLRPTCKEVISRGDDY  635 (635)
Q Consensus       586 ~~~l~el~~~~~l~~yp~l~~~~g~~vAqfEhTvlVt~~G~~vlT~~~~~  635 (635)
                                        +++.+|+++||||||||||+||+||||++|||
T Consensus       264 ------------------~v~~~g~~~~~~E~tvlVt~~G~EvLT~~d~~  295 (295)
T d1b6aa2         264 ------------------VVDIKGSYTAQFEHTILLRPTCKEVVSRGDDY  295 (295)
T ss_dssp             ------------------CCCSTTCCEEEEEEEEEECSSCEEETTCCSCC
T ss_pred             ------------------EEccCCcEEEEeceEEEECCCcCeECCCCCCC
Confidence                              23467999999999999999999999999999
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1b6aa1 a.4.5.25 (A:375-448) Methionine aminopeptidase, insert domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xgsa1 a.4.5.25 (A:195-271) Methionine aminopeptidase, insert domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure