Psyllid ID: psy1578

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440
Protein Sequence
MSRTLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEYNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISKLSEAKVNQLLTLSGLDTSGCNVAEITERYNKSLQFSPGLGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKSRFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFGDPSPGIVHPLESELKITKEGVRGLANPFESRFLENPSRVNPRTRVAFMAPSLSTFLRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFGDPSPGIVHPLESELKVSSC
Secondary Structure (PSIPRED)
ccccccccccccccccHHHcccccccccEEEEEEEEEEEEcccccccccccccccccccccccccccEEEcccccccEEEcccccccEEEEEEEEcccccEEEEEccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEcccccccccccccEEccccccHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEEEEEEEEEEEEEccccccccccccEEEEccccccccccEEEcEEEEccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEEEEEEEEcccccccccccEEEEccccccccccEEEcEEEEccccccccccccccEEEccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccHHHHHHccccEEEEEEEEEEEEEcccccccHcccccccccccccccccccccEcEHHHHHHHHEccccccEEEEEEEEEcccccEEEEEcccEEEEccccccccHEcHHHccHHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccEHHccccccEEcccccccccccEcccHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEEEEEcccEEEEcccccccccccEEHHHccccccccEEEEEEEccccccccccEccccccEEEccccccHEEEEEEEccccccccccHHHHHHcccccccHHcccccccccccccEEEEEEEEEEEcccEEEcccccccccccccccccccccccccEEEEEEEccccccccccEccccccEEEEcc
Coil and Loop (DISEMBL)
msrtlpenepkdfhilpelalndgkyknLYRTRIKVSlrgnttshslhsdnppsrprtlpenepkdfhilpelalndvyVGEYNSALVSKLIIScdshvpakqikcsgmcintgsgstAWYYTISKLSEAKVNQLLTLsgldtsgcnVAEITERYNKslqfspglgadiidstnQNMILFGelqeedtwfelepaqksyFDSMQHVNSYLQEEFHAVQNLLWKSRFISTftelpkrkskpseppdacrihgsltlnKVAGnlhvtagkslalpgghihltmfglgatynfshridkfsfgdpspgivhpleselKITKEgvrglanpfesrflenpsrvnprtrvafmapslstflrkskpseppdacrihgsltlnKVAGnlhvtagkslalpgghihltmfglgatynfshridkfsfgdpspgivhpleselkvssc
Flexible Loop (DISEMBL)
msrtlpenepkdfhilpelalndgkykNLYRTRIKVSlrgnttshslhsdnppsrprTLPENEPKDFHILPELALNDVYVGEYNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISKLSEAKVNQLLTLSGLDTSGCNVAEITERYNKSLQFSPGLGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKSRFISTFTelpkrkskpseppdaCRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFGDPSPGIVHPLESELKITKEGVRGLanpfesrflenpsrvnprtrVAFMAPSLSTFLRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFGDPSPGivhpleselkvssc
Low Complexity Region (SEG)
MSRTLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEYNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISKLSEAKVNQLLTLSGLDTSGCNVAEITERYNKSLQFSPGLGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKSRFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFGDPSPGIVHPLESELKITKEGVRGLANPFESRFLENPSRVNPRTRVAFMAPSLSTFLRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFGDPSPGIVHPLESELKVSSC
Disordered region (IsUnstruct)
************FHILPELALNDGKYKNLYRTRIKVS*****************************FHILPELALNDVYVGEYNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISKLSEAKVNQLLTLSGLDTSGCNVAEITERYNKSLQFSPGLGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKSRFISTFT***************CRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFGDPSPGIVHPLE**LKIT**************************************************CRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFG*******************
Disordered Region (DISOPRED)
*******NEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLH**********************PELALNDVYVGEYNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISKLSEAKVNQLLTLSGLDTSGCNVAEITERYNKSLQFSPGLGADII************LQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKSRFISTFTELPKR*****EPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFGDPSPGIVHPLESELKITKEGVRGLANPFESRFLENPSRVNPRTRVAFMAPSLSTFLRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFGDPSPGIVHPLES*******
Disordered Region (DISEMBL)
*********PKDFHILPELALNDGKYKNLYRTRIKVSLRGN******************PENEPKDFHILPELALNDVYVGEYNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISKLSEAKVNQLLTLSGLDTSGCNVAEITERYNKSLQFSPGLGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKSRFISTFTE*************ACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFGDPSPGIVHPLESELKITKEGVRGLANPFESRFLENPSRVNPRTRVAFMAPSLSTFL**********ACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFGDPSPGIVHPLE********
Disordered Region (DISPRO)
****LPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHS*H*****************DFHILPELALNDVYVGEYNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISKLSEAKVNQLLTLSGLDTSGCNVAEITERYNKSLQFSPGLGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKSRFISTFTELPK*******PPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFGDPSPGIVHPLESELKITKEGVRGLANPFESRFLENPSRVNPRTRVAFMAPSLSTFLRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFGDPSPGIVHPLESELKVSSC
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSRTLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEYNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISKLSEAKVNQLLTLSGLDTSGCNVAEITERYNKSLQFSPGLGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKSRFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFGDPSPGIVHPLESELKITKEGVRGLANPFESRFLENPSRVNPRTRVAFMAPSLSTFLRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFGDPSPGIVHPLESELKVSSC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	440	2.2.26 [Sep-21-2011]
Q5EHU7	377	Endoplasmic reticulum-Gol	N/A	N/A	0.343	0.400	0.467	4e-32
Q96RQ1	377	Endoplasmic reticulum-Gol	yes	N/A	0.343	0.400	0.460	9e-31
Q9CR89	377	Endoplasmic reticulum-Gol	no	N/A	0.35	0.408	0.445	3e-30
Q4R5C3	377	Endoplasmic reticulum-Gol	N/A	N/A	0.343	0.400	0.453	7e-30
Q7T2D4	376	Endoplasmic reticulum-Gol	yes	N/A	0.347	0.406	0.412	7e-28
Q1HCL7	425	NAD kinase domain-contain	yes	N/A	0.338	0.350	0.323	3e-09
Q4R8X1	382	Endoplasmic reticulum-Gol	N/A	N/A	0.204	0.235	0.391	7e-09
Q4G0N4	442	NAD kinase domain-contain	no	N/A	0.315	0.314	0.310	2e-08
Q5R8G3	383	Endoplasmic reticulum-Gol	no	N/A	0.15	0.172	0.455	2e-08
Q9Y282	383	Endoplasmic reticulum-Gol	no	N/A	0.15	0.172	0.455	2e-08

>sp|Q5EHU7|ERGI2_GECJA Endoplasmic reticulum-Golgi intermediate compartment protein 2 OS=Gecko japonicus GN=ERGIC2 PE=2 SV=1

 Score =  139 bits (350), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 71/152 (46%), Positives = 96/152 (63%), Gaps = 1/152 (0%)

Query: 165 LGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKS 224
           +GAD++D     +     L  E   F+L P QK +   +Q + S LQEE H++Q++++KS
Sbjct: 89  VGADVLDLAETMVASTDGLVYEPAIFDLSPQQKEWQRMLQRIQSRLQEE-HSLQDVIFKS 147

Query: 225 RFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGL 284
            F S  T LP R+   S+PPDACRIHG L +NKVAGN H+T GK++  P GH HL     
Sbjct: 148 TFKSASTALPPREDDSSQPPDACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVN 207

Query: 285 GATYNFSHRIDKFSFGDPSPGIVHPLESELKI 316
             +YNFSHRID  SFG+  PGI++PL+   KI
Sbjct: 208 HDSYNFSHRIDHLSFGELVPGIINPLDGTEKI 239

Possible role in transport between endoplasmic reticulum and Golgi.
Gecko japonicus (taxid: 146911)

>sp|Q96RQ1|ERGI2_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 2 OS=Homo sapiens GN=ERGIC2 PE=1 SV=2

 Score =  134 bits (338), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 70/152 (46%), Positives = 96/152 (63%), Gaps = 1/152 (0%)

Query: 165 LGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKS 224
           +GAD++D     +     L  E T F+L P QK +   +Q + S LQEE H++Q++++KS
Sbjct: 89  VGADVLDLAETMVASADGLVYEPTVFDLSPQQKEWQRMLQLIQSRLQEE-HSLQDVIFKS 147

Query: 225 RFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGL 284
            F ST T LP R+   S+ P+ACRIHG L +NKVAGN H+T GK++  P GH HL     
Sbjct: 148 AFKSTSTALPPREDDSSQSPNACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVN 207

Query: 285 GATYNFSHRIDKFSFGDPSPGIVHPLESELKI 316
             +YNFSHRID  SFG+  P I++PL+   KI
Sbjct: 208 HESYNFSHRIDHLSFGELVPAIINPLDGTEKI 239

Possible role in transport between endoplasmic reticulum and Golgi.

Homo sapiens (taxid: 9606)

>sp|Q9CR89|ERGI2_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 2 OS=Mus musculus GN=Ergic2 PE=2 SV=1

 Score =  133 bits (334), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 95/155 (61%), Gaps = 1/155 (0%)

Query: 165 LGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKS 224
           +GAD++D     +     L  E   F+L P Q+ +   +Q + S LQEE H++Q++++KS
Sbjct: 89  VGADVLDLAETMVASADGLAYEPALFDLSPQQREWQRMLQLIQSRLQEE-HSLQDVIFKS 147

Query: 225 RFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGL 284
            F S  T LP R+   S  PDACRIHG L +NKVAGN H+T GK++  P GH HL     
Sbjct: 148 AFKSASTALPPREDDSSLTPDACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVN 207

Query: 285 GATYNFSHRIDKFSFGDPSPGIVHPLESELKITKE 319
             +YNFSHRID  SFG+  PGI++PL+   KI  +
Sbjct: 208 HDSYNFSHRIDHLSFGELVPGIINPLDGTEKIAVD 242

Possible role in transport between endoplasmic reticulum and Golgi.

Mus musculus (taxid: 10090)

>sp|Q4R5C3|ERGI2_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 2 OS=Macaca fascicularis GN=ERGIC2 PE=2 SV=1

 Score =  132 bits (331), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 69/152 (45%), Positives = 93/152 (61%), Gaps = 1/152 (0%)

Query: 165 LGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKS 224
           +GAD++D     +     L  E   F+L P QK +   +Q   S LQEE H++Q++++KS
Sbjct: 89  VGADVLDLAETMVASADGLVYEPAVFDLSPQQKEWQRMLQLTQSRLQEE-HSLQDVIFKS 147

Query: 225 RFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGL 284
            F S  T LP R+   S+ PDACRIHG L +NKVAGN H+T GK++  P GH HL     
Sbjct: 148 AFKSASTALPPREDDSSQSPDACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVN 207

Query: 285 GATYNFSHRIDKFSFGDPSPGIVHPLESELKI 316
             +YNFSHRID  SFG+  P I++PL+   KI
Sbjct: 208 HESYNFSHRIDHLSFGELVPAIINPLDGTEKI 239

Possible role in transport between endoplasmic reticulum and Golgi.

Macaca fascicularis (taxid: 9541)

>sp|Q7T2D4|ERGI2_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 2 OS=Danio rerio GN=ergic2 PE=2 SV=1

 Score =  125 bits (314), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 98/155 (63%), Gaps = 2/155 (1%)

Query: 165 LGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKS 224
           +GAD++D   + M+    L  E   F+L P Q+ +  ++  +   L+EE H++Q++L+K+
Sbjct: 89  VGADVLDLA-ETMVASDGLVYEPVVFDLSPQQRLWHRTLLLIQGRLREE-HSLQDVLFKN 146

Query: 225 RFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGL 284
               + T LP R+  P++P +ACRIHG L +NKVAGN H+T GK++  P GH HL     
Sbjct: 147 VMKGSPTALPPREDDPNQPLNACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVS 206

Query: 285 GATYNFSHRIDKFSFGDPSPGIVHPLESELKITKE 319
             TYNFSHRID  SFG+  PGI++PL+   K++ +
Sbjct: 207 HETYNFSHRIDHLSFGEEIPGILNPLDGTEKVSAD 241

Possible role in transport between endoplasmic reticulum and Golgi.

Danio rerio (taxid: 7955)

>sp|Q1HCL7|NAKD1_RAT NAD kinase domain-containing protein 1, mitochondrial OS=Rattus norvegicus GN=Nadkd1 PE=2 SV=1

 Score = 63.5 bits (153), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 21/170 (12%)

Query: 14  HILPEL--ALNDGKYKNLYRTRIKVSLRG---NTTSHSLH----SDNPPSRPRTLPE--- 61
           H  PE     + G+++ L+R RI++ L G   N +   LH    S N  SR   +     
Sbjct: 183 HSFPEALQKFSRGEFRWLWRQRIRLYLEGTGINPSPVDLHEQQLSLNQHSRAFNIERVDD 242

Query: 62  --NEPKDFHILPELALNDVYVGEYNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTA 119
             +E     +LP  ALN+V++GE  S+  S   IS D   P ++ K SG+ + TG+GS A
Sbjct: 243 ERSEASGPQLLPVRALNEVFIGESLSSRASYYEISVDDG-PWEKQKSSGLNLCTGTGSKA 301

Query: 120 WYYTISKLSEAKVNQLLTLS---GLDTSGCN---VAEITERYNKSLQFSP 163
           W + I++++   V  +L ++   G  T   N   V ++T  YN+SL +SP
Sbjct: 302 WSFNINRVAAQAVEDVLNIARRQGNLTLPLNKELVEKVTNEYNESLLYSP 351

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: -

>sp|Q4R8X1|ERGI3_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Macaca fascicularis GN=ERGIC3 PE=2 SV=1

 Score = 62.4 bits (150), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 7/97 (7%)

Query: 342 RTRVAFMAPSLSTFLRKSKPSEPP-----DACRIHGSLTLNKVAGNLHVTAGKSLALPGG 396
           R R AF  P      R+   S+       + C+++G L +NKVAGN H   GKS      
Sbjct: 167 RRRGAFKNPDTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHV 226

Query: 397 HIH-LTMFGLGATYNFSHRIDKFSFGDPSPGIVHPLE 432
           H+H L  FGL    N +H I   SFG+  PGIV+PL+
Sbjct: 227 HVHDLQSFGLD-NINMTHYIQHLSFGEDYPGIVNPLD 262

Possible role in transport between endoplasmic reticulum and Golgi.

Macaca fascicularis (taxid: 9541)

>sp|Q4G0N4|NAKD1_HUMAN NAD kinase domain-containing protein 1, mitochondrial OS=Homo sapiens GN=NADKD1 PE=1 SV=2

 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 19/158 (12%)

Query: 24  GKYKNLYRTRIKVSLRG---NTTSHSLH----SDNPPSRPRTLPE-----NEPKDFHILP 71
           G+++ L+R RI++ L G   N     LH    S N  +R   +       +E     +LP
Sbjct: 212 GEFRWLWRQRIRLYLEGTGINPVPVDLHEQQLSLNQHNRALNIERAHDERSEASGPQLLP 271

Query: 72  ELALNDVYVGEYNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISKLSEAK 131
             ALN+V++GE  S+  S   IS D   P ++ K SG+ + TG+GS AW + I++++   
Sbjct: 272 VRALNEVFIGESLSSRASYYEISVDDG-PWEKQKSSGLNLCTGTGSKAWSFNINRVATQA 330

Query: 132 VNQLLTLS------GLDTSGCNVAEITERYNKSLQFSP 163
           V  +L ++       L  +   V ++T  YN+SL +SP
Sbjct: 331 VEDVLNIAKRQGNLSLPLNRELVEKVTNEYNESLLYSP 368

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: -

>sp|Q5R8G3|ERGI3_PONAB Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Pongo abelii GN=ERGIC3 PE=2 SV=1

 Score = 60.5 bits (145), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 2/68 (2%)

Query: 245 DACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIH-LTMFGLGATYNFSHRIDKFSFGDPS 303
           + C+++G L +NKVAGN H   GKS      H+H L  FGL    N +H I   SFG+  
Sbjct: 197 EGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLD-NINMTHYIQHLSFGEDY 255

Query: 304 PGIVHPLE 311
           PGIV+PL+
Sbjct: 256 PGIVNPLD 263

Possible role in transport between endoplasmic reticulum and Golgi.

Pongo abelii (taxid: 9601)

>sp|Q9Y282|ERGI3_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Homo sapiens GN=ERGIC3 PE=1 SV=1

 Score = 60.5 bits (145), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 2/68 (2%)

Query: 245 DACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIH-LTMFGLGATYNFSHRIDKFSFGDPS 303
           + C+++G L +NKVAGN H   GKS      H+H L  FGL    N +H I   SFG+  
Sbjct: 197 EGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLD-NINMTHYIQHLSFGEDY 255

Query: 304 PGIVHPLE 311
           PGIV+PL+
Sbjct: 256 PGIVNPLD 263

Possible role in transport between endoplasmic reticulum and Golgi.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	440
383865060	392	PREDICTED: endoplasmic reticulum-Golgi i	0.345	0.387	0.598	2e-52
322791472	403	hypothetical protein SINV_02690 [Solenop	0.345	0.377	0.592	5e-52
332020071	390	Endoplasmic reticulum-Golgi intermediate	0.345	0.389	0.592	1e-51
307188057	386	Endoplasmic reticulum-Golgi intermediate	0.345	0.393	0.592	1e-51
66500700	389	PREDICTED: endoplasmic reticulum-Golgi i	0.345	0.390	0.592	2e-51
380016475	392	PREDICTED: endoplasmic reticulum-Golgi i	0.345	0.387	0.592	2e-51
270003406	380	hypothetical protein TcasGA2_TC002635 [T	0.356	0.413	0.605	4e-51
350419069	392	PREDICTED: endoplasmic reticulum-Golgi i	0.345	0.387	0.592	4e-51
189235693	373	PREDICTED: similar to AGAP005044-PA [Tri	0.356	0.420	0.605	5e-51
340709072	392	PREDICTED: endoplasmic reticulum-Golgi i	0.345	0.387	0.592	6e-51

>gi|383865060|ref|XP_003707993.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 2-like [Megachile rotundata]

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 91/152 (59%), Positives = 125/152 (82%)

Query: 165 LGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKS 224
           +GAD++DSTNQNM+    L+EEDTW+EL   Q+S+F++++H+NSYL+EE+HA+  LLWKS
Sbjct: 88  IGADVLDSTNQNMVGHESLEEEDTWWELTQEQRSHFEALKHMNSYLREEYHAIHELLWKS 147

Query: 225 RFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGL 284
             ++  +E+PKR  +PS PP+ACRIHGSL +NKV+GN H+TAGKSL++P GHIH++ F +
Sbjct: 148 NQVTLHSEMPKRSHQPSYPPNACRIHGSLNVNKVSGNFHITAGKSLSIPRGHIHISAFMI 207

Query: 285 GATYNFSHRIDKFSFGDPSPGIVHPLESELKI 316
              YNF+HRI+KFSFG PSPG+VHPLE + KI
Sbjct: 208 DRDYNFTHRINKFSFGGPSPGVVHPLEGDEKI 239

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322791472|gb|EFZ15869.1| hypothetical protein SINV_02690 [Solenopsis invicta]

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 90/152 (59%), Positives = 124/152 (81%)

Query: 165 LGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKS 224
           +GAD++DSTNQ+MI F  L+EEDTW+EL   Q+++F++++H+NSYL+EE+HA+  LLWKS
Sbjct: 102 IGADVLDSTNQHMIDFDSLKEEDTWWELTAEQRAHFEALKHMNSYLREEYHAIHELLWKS 161

Query: 225 RFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGL 284
             +  ++E+PKR S+P   P+ACR+HGSL +NKVAGN H+TAGKSL++P GHIH++ F  
Sbjct: 162 NQVILYSEMPKRTSEPDYAPNACRVHGSLNVNKVAGNFHITAGKSLSVPHGHIHISAFMT 221

Query: 285 GATYNFSHRIDKFSFGDPSPGIVHPLESELKI 316
              YNF+HRI++FSFG PSPGIVHPLE + KI
Sbjct: 222 DRDYNFTHRINRFSFGGPSPGIVHPLEGDEKI 253

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020071|gb|EGI60517.1| Endoplasmic reticulum-Golgi intermediate compartment protein 2 [Acromyrmex echinatior]

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 90/152 (59%), Positives = 122/152 (80%)

Query: 165 LGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKS 224
           +GAD++DSTNQ+MI F  L EEDTW+EL   Q+++F++++H+NSYL+EE+HA+  LLWKS
Sbjct: 88  IGADVLDSTNQHMIDFDSLTEEDTWWELTQEQRTHFEALKHMNSYLREEYHAIHELLWKS 147

Query: 225 RFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGL 284
             ++ ++E+PKR   P   P+ACR+HGSL +NKVAGN H+TAGKSL++P GHIH++ F  
Sbjct: 148 NQVTLYSEMPKRSYVPDYAPNACRVHGSLNINKVAGNFHITAGKSLSVPHGHIHISAFMT 207

Query: 285 GATYNFSHRIDKFSFGDPSPGIVHPLESELKI 316
              YNF+HRI+KFSFG PSPGIVHPLE + KI
Sbjct: 208 DRDYNFTHRINKFSFGGPSPGIVHPLEGDEKI 239

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307188057|gb|EFN72889.1| Endoplasmic reticulum-Golgi intermediate compartment protein 2 [Camponotus floridanus]

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 90/152 (59%), Positives = 122/152 (80%)

Query: 165 LGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKS 224
           +GAD++DSTNQNMI +  L+EEDTW+EL   Q+++F++++H+NSYL+EE+HA+  LLWKS
Sbjct: 88  IGADVLDSTNQNMISYDTLEEEDTWWELTQEQRAHFEALKHMNSYLREEYHAIHELLWKS 147

Query: 225 RFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGL 284
             I+ ++E+P R  KP    +ACRIHGSL +NKVAGN H+TAGKSL+LP GHIH++ +  
Sbjct: 148 NQITLYSEMPMRSHKPDYATNACRIHGSLVVNKVAGNFHITAGKSLSLPRGHIHISAYMT 207

Query: 285 GATYNFSHRIDKFSFGDPSPGIVHPLESELKI 316
              YNF+HRI++FSFG PSPGIVHPLE + KI
Sbjct: 208 DQDYNFTHRINRFSFGGPSPGIVHPLEGDEKI 239

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66500700|ref|XP_395190.2| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 2-like isoform 1 [Apis mellifera]

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 90/152 (59%), Positives = 122/152 (80%)

Query: 165 LGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKS 224
           +GAD++DSTNQNM+    L++EDTW+EL   Q+S+F++++H NSYL+EE+HA+  LLWKS
Sbjct: 88  IGADVLDSTNQNMVGHESLEQEDTWWELTQEQRSHFEALKHTNSYLREEYHAIHELLWKS 147

Query: 225 RFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGL 284
             ++ ++E+PKR  +P   P+ACRIHGSL +NKVAGN H+TAGKSL++P GHIH++ F  
Sbjct: 148 NQVTLYSEMPKRTHQPIYAPNACRIHGSLNVNKVAGNFHITAGKSLSIPKGHIHISAFMT 207

Query: 285 GATYNFSHRIDKFSFGDPSPGIVHPLESELKI 316
              YNF+HRI+KFSFG PSPGIVHPLE + KI
Sbjct: 208 EKDYNFTHRINKFSFGGPSPGIVHPLEGDEKI 239

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380016475|ref|XP_003692209.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 2-like [Apis florea]

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 90/152 (59%), Positives = 122/152 (80%)

Query: 165 LGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKS 224
           +GAD++DSTNQNM+    L++EDTW+EL   Q+S+F++++H NSYL+EE+HA+  LLWKS
Sbjct: 88  IGADVLDSTNQNMVGHESLEQEDTWWELTQEQRSHFEALKHTNSYLREEYHAIHELLWKS 147

Query: 225 RFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGL 284
             ++ ++E+PKR  +P   P+ACRIHGSL +NKVAGN H+TAGKSL++P GHIH++ F  
Sbjct: 148 NQVTLYSEMPKRTHQPIYAPNACRIHGSLNVNKVAGNFHITAGKSLSIPKGHIHISAFMT 207

Query: 285 GATYNFSHRIDKFSFGDPSPGIVHPLESELKI 316
              YNF+HRI+KFSFG PSPGIVHPLE + KI
Sbjct: 208 EKDYNFTHRINKFSFGGPSPGIVHPLEGDEKI 239

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270003406|gb|EEZ99853.1| hypothetical protein TcasGA2_TC002635 [Tribolium castaneum]

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 95/157 (60%), Positives = 119/157 (75%)

Query: 165 LGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKS 224
           LGADI+DSTNQN   FG L EEDTWFE+ P Q+ +F + +  NSY++EE+HA++++LWKS
Sbjct: 95  LGADILDSTNQNAYKFGSLDEEDTWFEMAPNQQIHFHNKKQFNSYVREEYHALKDVLWKS 154

Query: 225 RFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGL 284
           RF + F   P+R + P+ P DACRIHGSL LNKV+GN H+TAGKSL LP GHIH++ F  
Sbjct: 155 RFSTMFRHRPERSTYPNRPHDACRIHGSLILNKVSGNFHITAGKSLNLPRGHIHISAFMS 214

Query: 285 GATYNFSHRIDKFSFGDPSPGIVHPLESELKITKEGV 321
              YNFSHRID FSFGD SPGI+HPLE +  IT  G+
Sbjct: 215 ERDYNFSHRIDTFSFGDSSPGIIHPLEGDELITHNGM 251

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350419069|ref|XP_003492060.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 2-like [Bombus impatiens]

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 90/152 (59%), Positives = 122/152 (80%)

Query: 165 LGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKS 224
           + AD++DSTNQNMI    L++EDTW+EL   Q+S+F+++++VNSYL+EE+HA+  LLWKS
Sbjct: 88  ISADVLDSTNQNMIGHESLEQEDTWWELTQEQRSHFEALKNVNSYLREEYHAIHELLWKS 147

Query: 225 RFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGL 284
             ++ ++E+PKR  +PS PP++CRIHGSL +NKVAGN H+TAGKSL+ P GHIH+  F  
Sbjct: 148 NQVTLYSEMPKRTHQPSYPPNSCRIHGSLNVNKVAGNFHITAGKSLSFPMGHIHILTFMT 207

Query: 285 GATYNFSHRIDKFSFGDPSPGIVHPLESELKI 316
              YNF+HRI+KFSFG PSPGI+HPLE + KI
Sbjct: 208 DKDYNFTHRINKFSFGGPSPGIIHPLEGDEKI 239

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189235693|ref|XP_966630.2| PREDICTED: similar to AGAP005044-PA [Tribolium castaneum]

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 95/157 (60%), Positives = 119/157 (75%)

Query: 165 LGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKS 224
           LGADI+DSTNQN   FG L EEDTWFE+ P Q+ +F + +  NSY++EE+HA++++LWKS
Sbjct: 88  LGADILDSTNQNAYKFGSLDEEDTWFEMAPNQQIHFHNKKQFNSYVREEYHALKDVLWKS 147

Query: 225 RFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGL 284
           RF + F   P+R + P+ P DACRIHGSL LNKV+GN H+TAGKSL LP GHIH++ F  
Sbjct: 148 RFSTMFRHRPERSTYPNRPHDACRIHGSLILNKVSGNFHITAGKSLNLPRGHIHISAFMS 207

Query: 285 GATYNFSHRIDKFSFGDPSPGIVHPLESELKITKEGV 321
              YNFSHRID FSFGD SPGI+HPLE +  IT  G+
Sbjct: 208 ERDYNFSHRIDTFSFGDSSPGIIHPLEGDELITHNGM 244

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709072|ref|XP_003393139.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 2-like [Bombus terrestris]

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 90/152 (59%), Positives = 121/152 (79%)

Query: 165 LGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKS 224
           + AD++DSTNQNMI    L++EDTW+EL   Q+S+F++++ VNSYL+EE+HA+  LLWKS
Sbjct: 88  ISADVLDSTNQNMIGHESLEQEDTWWELTQEQRSHFEALKDVNSYLREEYHAIHELLWKS 147

Query: 225 RFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGL 284
             ++ ++E+PKR  +PS PP++CRIHGSL +NKVAGN H+TAGKSL+ P GHIH+  F  
Sbjct: 148 NQVTLYSEMPKRTHQPSYPPNSCRIHGSLNVNKVAGNFHITAGKSLSFPMGHIHILTFMT 207

Query: 285 GATYNFSHRIDKFSFGDPSPGIVHPLESELKI 316
              YNF+HRI+KFSFG PSPGI+HPLE + KI
Sbjct: 208 DKDYNFTHRINKFSFGGPSPGIIHPLEGDEKI 239

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	440
UNIPROTKB|Q96RQ1	377	ERGIC2 "Endoplasmic reticulum-	0.340	0.397	0.464	4.2e-31
MGI|MGI:1914706	377	Ergic2 "ERGIC and golgi 2" [Mu	0.340	0.397	0.457	1.8e-30
ZFIN|ZDB-GENE-040426-1331	376	ergic2 "ERGIC and golgi 2" [Da	0.347	0.406	0.412	7.1e-29
FB|FBgn0024983	441	CG4293 [Drosophila melanogaste	0.179	0.179	0.428	6.9e-17
FB|FBgn0033373	413	CG8080 [Drosophila melanogaste	0.325	0.346	0.317	4.2e-14
ZFIN|ZDB-GENE-040801-202	425	nadkd1 "NAD kinase domain cont	0.281	0.291	0.379	2.3e-11
UNIPROTKB|F1NJU9	343	NADKD1 "Uncharacterized protei	0.338	0.434	0.335	1.9e-09
TAIR|locus:2015056	386	AT1G22200 "AT1G22200" [Arabido	0.172	0.196	0.417	2.5e-09
TAIR|locus:2034330	489	AT1G36050 "AT1G36050" [Arabido	0.175	0.157	0.410	4.1e-09
RGD|1306809	425	Nadkd1 "NAD kinase domain cont	0.338	0.350	0.323	1.5e-08

UNIPROTKB|Q96RQ1 ERGIC2 "Endoplasmic reticulum-Golgi intermediate compartment protein 2" [Homo sapiens (taxid:9606)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 71/153 (46%), Positives = 99/153 (64%)

Query:   165 LGADIIDSTNQNMILFGE-LQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWK 223
             +GAD++D   + M+   + L  E T F+L P QK +   +Q + S LQEE H++Q++++K
Sbjct:    89 VGADVLDLA-ETMVASADGLVYEPTVFDLSPQQKEWQRMLQLIQSRLQEE-HSLQDVIFK 146

Query:   224 SRFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFG 283
             S F ST T LP R+   S+ P+ACRIHG L +NKVAGN H+T GK++  P GH HL    
Sbjct:   147 SAFKSTSTALPPREDDSSQSPNACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALV 206

Query:   284 LGATYNFSHRIDKFSFGDPSPGIVHPLESELKI 316
                +YNFSHRID  SFG+  P I++PL+   KI
Sbjct:   207 NHESYNFSHRIDHLSFGELVPAIINPLDGTEKI 239

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

MGI|MGI:1914706 Ergic2 "ERGIC and golgi 2" [Mus musculus (taxid:10090)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 70/153 (45%), Positives = 97/153 (63%)

Query:   165 LGADIIDSTNQNMILFGE-LQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWK 223
             +GAD++D   + M+   + L  E   F+L P Q+ +   +Q + S LQEE H++Q++++K
Sbjct:    89 VGADVLDLA-ETMVASADGLAYEPALFDLSPQQREWQRMLQLIQSRLQEE-HSLQDVIFK 146

Query:   224 SRFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFG 283
             S F S  T LP R+   S  PDACRIHG L +NKVAGN H+T GK++  P GH HL    
Sbjct:   147 SAFKSASTALPPREDDSSLTPDACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALV 206

Query:   284 LGATYNFSHRIDKFSFGDPSPGIVHPLESELKI 316
                +YNFSHRID  SFG+  PGI++PL+   KI
Sbjct:   207 NHDSYNFSHRIDHLSFGELVPGIINPLDGTEKI 239

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

ZFIN|ZDB-GENE-040426-1331 ergic2 "ERGIC and golgi 2" [Danio rerio (taxid:7955)]

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 64/155 (41%), Positives = 98/155 (63%)

Query:   165 LGADIIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKS 224
             +GAD++D   + M+    L  E   F+L P Q+ +  ++  +   L+EE H++Q++L+K+
Sbjct:    89 VGADVLDLA-ETMVASDGLVYEPVVFDLSPQQRLWHRTLLLIQGRLREE-HSLQDVLFKN 146

Query:   225 RFISTFTELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGL 284
                 + T LP R+  P++P +ACRIHG L +NKVAGN H+T GK++  P GH HL     
Sbjct:   147 VMKGSPTALPPREDDPNQPLNACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVS 206

Query:   285 GATYNFSHRIDKFSFGDPSPGIVHPLESELKITKE 319
               TYNFSHRID  SFG+  PGI++PL+   K++ +
Sbjct:   207 HETYNFSHRIDHLSFGEEIPGILNPLDGTEKVSAD 241

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

FB|FBgn0024983 CG4293 [Drosophila melanogaster (taxid:7227)]

 Score = 143 (55.4 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
 Identities = 36/84 (42%), Positives = 50/84 (59%)

Query:   239 KPSEPPDACRIHGSLTLNKVAGNLHVTAGKS--LALPGGHIHLTMFGLGATYNFSHRIDK 296
             +P    DACR+HG+L +NKVAG LH+  G    + L   H  + +  + A  NF+HRI++
Sbjct:   192 QPESKFDACRLHGTLGINKVAGVLHLVGGAQPVVGLFEDHWMIELRRMPA--NFTHRINR 249

Query:   297 FSFGDPSPGIVHPLES-ELKITKE 319
              SFG  S  IV PLE  E+ I +E
Sbjct:   250 LSFGQYSGRIVQPLEGDEIVIHEE 273

GO:0004053 "arginase activity" evidence=ISS

FB|FBgn0033373 CG8080 [Drosophila melanogaster (taxid:7227)]

 Score = 208 (78.3 bits), Expect = 4.2e-14, P = 4.2e-14
 Identities = 52/164 (31%), Positives = 90/164 (54%)

Query:    21 LNDGKYKNLYRTRIKVSLRGNT------TSHSLHSDNPPSRPRTLPENEPKDF------- 67
             +  G +K ++R+R++ ++ G+       T    H++    +  T PE   +D        
Sbjct:   174 IKSGDFKWMHRSRVRTTMLGSNGNIPEPTDLFRHTEVKMEQVSTAPEMLDQDMAYKYKAK 233

Query:    68 --HILPELALNDVYVGEYNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTIS 125
                +LP LALN+V++GE+ SA VS L +  D      + KCSG+C++TG+GST+W+ +I+
Sbjct:   234 MKRVLPYLALNEVFIGEHLSARVSHLQLVLDHQDVVNKTKCSGLCVSTGTGSTSWHTSIN 293

Query:   126 KLSEAKVNQLL-TLSGLDTSGC-----NVAEITERYNKSLQFSP 163
             +++   V+ LL +L   D+        N  EI +RYN+ L F+P
Sbjct:   294 RITSRDVDDLLRSLPDGDSKNVMMLRQNAEEIAQRYNQGLLFAP 337

GO:0006741 "NADP biosynthetic process" evidence=IEA

GO:0003951 "NAD+ kinase activity" evidence=IEA

GO:0019674 "NAD metabolic process" evidence=IEA

ZFIN|ZDB-GENE-040801-202 nadkd1 "NAD kinase domain containing 1" [Danio rerio (taxid:7955)]

 Score = 184 (69.8 bits), Expect = 2.3e-11, P = 2.3e-11
 Identities = 52/137 (37%), Positives = 76/137 (55%)

Query:    34 IKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEYNSALVSKLII 93
             +++SL+ ++ +H + +    S P   PE  P   H+LP   LN++++GE  S+  S   I
Sbjct:   222 LQLSLQQHSKAHRISTGTQSSTPHDSPE-AP---HLLPVRGLNEIFIGESLSSRASYYEI 277

Query:    94 SCDSHVPAKQIKCSGMCINTGSGSTAWYYTISKLSEAKVNQLL----TLSGLDTSGCN-- 147
             S D     KQ K SG+ I TG+GS AW Y I+KL E  V  +L    T +GL+    N  
Sbjct:   278 SIDDGPWEKQ-KSSGLSICTGTGSKAWSYNINKLVEQAVEDVLRIAKTKTGLEVP-LNRE 335

Query:   148 -VAEITERYNKSLQFSP 163
              V  +T+ YN+SL FSP
Sbjct:   336 FVESVTDTYNESLIFSP 352

GO:0003951 "NAD+ kinase activity" evidence=IEA

GO:0006741 "NADP biosynthetic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0019674 "NAD metabolic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|F1NJU9 NADKD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 165 (63.1 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 57/170 (33%), Positives = 85/170 (50%)

Query:    14 HILPELA--LNDGKYKNLYRTRIKVSLRG---NTTSHSLH----SDNPPSRPRTLP--EN 62
             H  PE    L  G+++  +R RI++ L G   N     LH    S    SR       ++
Sbjct:   100 HSFPEALQKLYRGEFRWQWRQRIRLYLEGTGINPVPVDLHEQQLSQEQHSRAHINERFQD 159

Query:    63 EPKDF---HILPELALNDVYVGEYNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTA 119
             +  D    H+LP  ALN+V++GE  S+  S   IS D     KQ K SG+ + TG+GS A
Sbjct:   160 QRSDVSGPHLLPVRALNEVFIGESLSSRASYYEISVDDGPWEKQ-KSSGLNVCTGTGSKA 218

Query:   120 WYYTISKLSEAKVNQLLTLS---GLDTSGCN---VAEITERYNKSLQFSP 163
             W Y I+K++   V ++L ++   G      N   V ++T  YN+SL +SP
Sbjct:   219 WSYNINKVANQAVEEILNIAKKHGSLNMPLNTELVQKVTNAYNESLLYSP 268

GO:0003951 "NAD+ kinase activity" evidence=IEA

GO:0006741 "NADP biosynthetic process" evidence=IEA

GO:0019674 "NAD metabolic process" evidence=IEA

TAIR|locus:2015056 AT1G22200 "AT1G22200" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 33/79 (41%), Positives = 49/79 (62%)

Query:   355 FLRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIH-LTMFGLGATYNFSH 413
             F++K K  E  + C +HG L +NKVAGN H   G+S    G   H + +F  G  YN SH
Sbjct:   191 FVQKVKDEEG-EGCNVHGFLEVNKVAGNFHFIPGQSFHQSGFQFHDMLLFQQG-NYNISH 248

Query:   414 RIDKFSFGDPSPGIVHPLE 432
             ++++ +FGD  PG+V+PL+
Sbjct:   249 KVNRLAFGDFFPGVVNPLD 267

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006626 "protein targeting to mitochondrion" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2034330 AT1G36050 "AT1G36050" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 4.1e-09, P = 4.1e-09
 Identities = 32/78 (41%), Positives = 49/78 (62%)

Query:   355 FLRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHR 414
             FL++ K  E  + C I+G L +NKVAGN H   GKS    G H+H  +     ++N SH+
Sbjct:   191 FLQRVKDEEG-EGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDLLAFQKDSFNISHK 249

Query:   415 IDKFSFGDPSPGIVHPLE 432
             I++ ++GD  PG+V+PL+
Sbjct:   250 INRLTYGDYFPGVVNPLD 267

GO:0003674 "molecular_function" evidence=ND

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

RGD|1306809 Nadkd1 "NAD kinase domain containing 1" [Rattus norvegicus (taxid:10116)]

 Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 55/170 (32%), Positives = 85/170 (50%)

Query:    14 HILPELA--LNDGKYKNLYRTRIKVSLRG---NTTSHSLHSD----NPPSRPRTLPE--- 61
             H  PE     + G+++ L+R RI++ L G   N +   LH      N  SR   +     
Sbjct:   183 HSFPEALQKFSRGEFRWLWRQRIRLYLEGTGINPSPVDLHEQQLSLNQHSRAFNIERVDD 242

Query:    62 --NEPKDFHILPELALNDVYVGEYNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTA 119
               +E     +LP  ALN+V++GE  S+  S   IS D     KQ K SG+ + TG+GS A
Sbjct:   243 ERSEASGPQLLPVRALNEVFIGESLSSRASYYEISVDDGPWEKQ-KSSGLNLCTGTGSKA 301

Query:   120 WYYTISKLSEAKVNQLLTLS---GLDTSGCN---VAEITERYNKSLQFSP 163
             W + I++++   V  +L ++   G  T   N   V ++T  YN+SL +SP
Sbjct:   302 WSFNINRVAAQAVEDVLNIARRQGNLTLPLNKELVEKVTNEYNESLLYSP 351

GO:0003951 "NAD+ kinase activity" evidence=IEA;ISO;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO;ISS

GO:0006741 "NADP biosynthetic process" evidence=IEA

GO:0019674 "NAD metabolic process" evidence=IEA;ISO;ISS

GO:0042803 "protein homodimerization activity" evidence=ISO;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	440
pfam07970	222	pfam07970, COPIIcoated_ERV, Endoplasmic reticulum	5e-18
pfam07970	222	pfam07970, COPIIcoated_ERV, Endoplasmic reticulum	1e-17

>gnl|CDD|219673 pfam07970, COPIIcoated_ERV, Endoplasmic reticulum vesicle transporter

 Score = 82.3 bits (204), Expect = 5e-18
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 1/82 (1%)

Query: 232 ELPKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFS 291
           E  ++        + CR+ G+L +N+VAGN H+  G+S    GGH+H          NFS
Sbjct: 41  EYVEKLKAQKNSNEGCRVKGTLEVNRVAGNFHIAPGRSFQEKGGHVHDLSLFTDEKLNFS 100

Query: 292 HRIDKFSFGDPSP-GIVHPLES 312
           H I+  SFG+  P G+ +PL+ 
Sbjct: 101 HTINHLSFGEEFPGGVTNPLDG 122

This family is conserved from plants and fungi to humans. Erv46 works in close conjunction with Erv41 and together they form a complex which cycles between the endoplasmic reticulum and Golgi complex. Erv46-41 interacts strongly with the endoplasmic reticulum glucosidase II. Mammalian glucosidase II comprises a catalytic alpha-subunit and a 58 kDa beta subunit, which is required for ER localisation. All proteins identified biochemically as Erv41p-Erv46p interactors are localised to the early secretory pathway and are involved in protein maturation and processing in the ER and/or sorting into COPII vesicles for transport to the Golgi. Length = 222

>gnl|CDD|219673 pfam07970, COPIIcoated_ERV, Endoplasmic reticulum vesicle transporter

 Score = 81.2 bits (201), Expect = 1e-17
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 368 CRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFGDPSP-G 426
           CR+ G+L +N+VAGN H+  G+S    GGH+H          NFSH I+  SFG+  P G
Sbjct: 56  CRVKGTLEVNRVAGNFHIAPGRSFQEKGGHVHDLSLFTDEKLNFSHTINHLSFGEEFPGG 115

Query: 427 IVHPLES 433
           + +PL+ 
Sbjct: 116 VTNPLDG 122

This family is conserved from plants and fungi to humans. Erv46 works in close conjunction with Erv41 and together they form a complex which cycles between the endoplasmic reticulum and Golgi complex. Erv46-41 interacts strongly with the endoplasmic reticulum glucosidase II. Mammalian glucosidase II comprises a catalytic alpha-subunit and a 58 kDa beta subunit, which is required for ER localisation. All proteins identified biochemically as Erv41p-Erv46p interactors are localised to the early secretory pathway and are involved in protein maturation and processing in the ER and/or sorting into COPII vesicles for transport to the Golgi. Length = 222

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	440
KOG2667|consensus	379		99.97
KOG4180|consensus	395		99.95
PF07970	222	COPIIcoated_ERV: Endoplasmic reticulum vesicle tra	99.89
PF07970	222	COPIIcoated_ERV: Endoplasmic reticulum vesicle tra	99.88
KOG2667|consensus	379		99.88
PRK03372	306	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	99.73
PRK01185	271	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	99.73
PRK14077	287	pnk inorganic polyphosphate/ATP-NAD kinase; Provis	99.72
PRK01911	292	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	99.72
PRK02649	305	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	99.72
PRK04539	296	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	99.71
PRK01231	295	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	99.7
PRK02155	291	ppnK NAD(+)/NADH kinase family protein; Provisiona	99.69
PRK02231	272	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	99.68
PLN02935	508	Bifunctional NADH kinase/NAD(+) kinase	99.68
PRK03708	277	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	99.67
PRK04885	265	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	99.66
PRK03501	264	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	99.66
PLN02929	301	NADH kinase	99.66
PRK03378	292	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	99.66
COG0061	281	nadF NAD kinase [Coenzyme metabolism]	99.65
PRK14076	569	pnk inorganic polyphosphate/ATP-NAD kinase; Provis	99.63
PRK14075	256	pnk inorganic polyphosphate/ATP-NAD kinase; Provis	99.63
PRK02645	305	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	99.61
PLN02727	986	NAD kinase	99.57
PF01513	285	NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Me	99.5
PRK00561	259	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	99.47
KOG2178|consensus	409		99.4
PRK04761	246	ppnK inorganic polyphosphate/ATP-NAD kinase; Revie	99.3
PF13850	96	ERGIC_N: Endoplasmic Reticulum-Golgi Intermediate	97.3

>KOG2667|consensus

Probab=99.97  E-value=4.3e-32  Score=275.48  Aligned_cols=211  Identities=23%  Similarity=0.281  Sum_probs=147.1

Q ss_pred             eeEeecceEEEcccccceeEEEEEecchhhhhhhhhccCCCCCCccHHHHHHHhcccccCCCCCccceecccccchhhcc
Q psy1578         102 KQIKCSGMCINTGSGSTAWYYTISKLSEAKVNQLLTLSGLDTSGCNVAEITERYNKSLQFSPGLGADIIDSTNQNMILFG  181 (440)
Q Consensus       102 ~~~~~dGliv~t~tgst~~~~s~~~~s~~~V~~ll~i~~~~~~~~~~~~It~~fn~~l~~c~~L~vDv~D~tgd~~~~~e  181 (440)
                      -++-|.-+|+.++.-|+.+|++.....++.|++--  .  ++.++| .|||  | |++ ||.+|+|||+|.+|++.++.+
T Consensus        30 islis~l~i~~L~~~E~~~y~~~~~~~~~~vd~s~--~--e~l~in-~DIt--f-p~l-pC~~lsVDv~D~sg~~~l~i~  100 (379)
T KOG2667|consen   30 ISLIAFLIILFLFFMELSQYLSVITSTELFVDDSR--D--EKLQIN-FDIT--F-PAL-PCSILSVDVMDVSGEMVLDID  100 (379)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcceeEEEEeCCC--C--ceeeee-eeEE--e-ccC-ccceEEEEeeccccccccchh
Confidence            46677788889999999999999999999987722  1  344556 7788  9 887 999999999999999999988


Q ss_pred             cceecCcccccCcchhhHHHhhh-----------hcccccchh--------------hh---hhHHHhhhcccccccccC
Q psy1578         182 ELQEEDTWFELEPAQKSYFDSMQ-----------HVNSYLQEE--------------FH---AVQNLLWKSRFISTFTEL  233 (440)
Q Consensus       182 ~l~~e~t~F~~~~~~~~~~~~l~-----------~~~~~~~ee--------------~~---~l~~~l~~s~~~~~~~~~  233 (440)
                      .+.+...+..    ..+.++..+           .-+....+.              ..   .+.+...+.+........
T Consensus       101 ~~i~k~rl~~----~~i~~~~~~~~~~~~k~~~p~~~~~~c~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~g~~~~~~~~  176 (379)
T KOG2667|consen  101 HLIYKLRLDP----EPIPLTIRRFDIFQHKQTIPTTDPILCGLCYGAEDFNDGDIDCCNLCEDVREAYRKAGWDFADEDL  176 (379)
T ss_pred             hhhhhcccCc----cccccchhhhcccccccccCCCCccchhhhhhhhccccccchhhhcchHHHHHhhhccccccCccc
Confidence            6632211111    011111100           000011000              01   111111111111000000


Q ss_pred             -------CCCCCCCCCCCCCceEEEEEEEeeeeeeEEEeeCCCcCCCCceeeeeecCCCCcccccEEEeEeEecCCCCCC
Q psy1578         234 -------PKRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRIDKFSFGDPSPGI  306 (440)
Q Consensus       234 -------~~r~~~~~~~~egCrI~Gsl~VnKV~GnfHIs~g~~~~~~~gh~h~~~~~~~~~~N~SH~I~~lSFG~~~pg~  306 (440)
                             ......+...+|||||+|++.||||||||||+||++....+.|.|+...+  +.+||||+|||||||+++||+
T Consensus       177 ~~q~~~~~~~~~~~~~~geGCRi~G~l~VNKVaGnfHia~g~~~~~~~~h~hd~~~~--~~~n~SH~InhLSFG~~~p~~  254 (379)
T KOG2667|consen  177 IDQCKNEGFTNKAAEQKGEGCRIYGQLEVNKVAGNFHIAPGKSSQHSNAHVHDLSLL--DNLNFSHRINHLSFGEYIPGI  254 (379)
T ss_pred             hhhhcccccccccCCCCCCceEEEEEEEEeeecceEEEccCCCccccccccchhhhc--ccCCceEEEeeeccCCCCccc
Confidence                   00011234678999999999999999999999999988888899976544  789999999999999999999


Q ss_pred             CCCCCCceeEeeecceeEEec
Q psy1578         307 VHPLESELKITKEGVRGLANP  327 (440)
Q Consensus       307 ~nPLDg~~~i~~~~~~~yqYy  327 (440)
                      .|||||+..++.++..|||||
T Consensus       255 ~nPLdG~~~~~~~~~~~~~Yf  275 (379)
T KOG2667|consen  255 VNPLDGTNFIANEHLTTFQYF  275 (379)
T ss_pred             ccCCCCccccccCCccceeeE
Confidence            999999999999999999999

>KOG4180|consensus

Probab=99.95  E-value=1.7e-28  Score=241.25  Aligned_cols=176  Identities=31%  Similarity=0.458  Sum_probs=147.8

Q ss_pred             CCCCCccCChhh---hccCCCeeeEEEeeEEEEEccC---CccccCCCCCCCCCCCCC---------CCCCCCCcccccc
Q psy1578           8 NEPKDFHILPEL---ALNDGKYKNLYRTRIKVSLRGN---TTSHSLHSDNPPSRPRTL---------PENEPKDFHILPE   72 (440)
Q Consensus         8 ~~p~~~~~~~~~---~l~~G~f~~~~R~rir~~~~~~---~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~   72 (440)
                      -+|++|..++-.   ++..|+|+|.+|+|||+||.|+   +.+++||+++.....+..         ..++++..+.+|+
T Consensus       147 cL~~~~~~n~~~al~k~~sgnF~wv~r~rir~tv~g~~gip~p~dlh~~q~s~nqr~sa~~i~~~~~s~sea~~~~~Lpv  226 (395)
T KOG4180|consen  147 CLPDKYPSNPAGALCKLTSGNFEWVLRQRIRGTVVGDDGIPDPIDLHDQQLSDNQRSSAKEIEETLLSHSEAVEIVALPV  226 (395)
T ss_pred             eccccCCCCcHHHHHHHHhccHHHhhhheeEEEEecCCCCCCchhhhhhhhccccccchhhHHHHHHhhhhhccccccch
Confidence            478888865554   6679999999999999999974   334799998766221111         1236677789999


Q ss_pred             ccceeeEeeccCcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEEecchhhhhhhhhcc---C---CCCCCc
Q psy1578          73 LALNDVYVGEYNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISKLSEAKVNQLLTLS---G---LDTSGC  146 (440)
Q Consensus        73 ~alNev~i~~~~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~~~s~~~V~~ll~i~---~---~~~~~~  146 (440)
                      +||||||||+..+||+++|++.||+. ...+++|+||+|||+||||+|++++|+.++++|+++|+++   +   +...+.
T Consensus       227 lALNEVfIgE~lsarVS~y~i~idd~-~~~KqKssgl~vctgTGstsw~~~iNria~q~v~d~l~~l~~~~~~~vp~~Re  305 (395)
T KOG4180|consen  227 LALNEVFIGESLSARVSYYEISIDDK-DGVKQKSSGLVVCTGTGSTSWTFNINRIAEQAVGDLLMILLSRDNLQVPFMRE  305 (395)
T ss_pred             hhhcceeecCcccccceeEEEEecCc-ccccccCCCeeEecCCCcceEeecccHHHHHHHHHHHHHHHhcCcccchhhhh
Confidence            99999999999999999999999997 6779999999999999999999999999999999998886   2   234578


Q ss_pred             cHHHHHHHhcccccCCCCCccceecccccchhhcccceecCccccc
Q psy1578         147 NVAEITERYNKSLQFSPGLGADIIDSTNQNMILFGELQEEDTWFEL  192 (440)
Q Consensus       147 ~~~~It~~fn~~l~~c~~L~vDv~D~tgd~~~~~e~l~~e~t~F~~  192 (440)
                      ++++|+.+||.+|+|-|+      +  .+..|+.++..++.+|..-
T Consensus       306 ~ve~i~~~~nq~llF~PD------~--p~l~fSiRepi~n~~~~s~  343 (395)
T KOG4180|consen  306 LVEEISTAYNQHLLFKPD------R--PQLAFSIREPIFNATWPST  343 (395)
T ss_pred             hhHHHHHHhhhcCccCCC------C--cchhhhhhhhhhccccCCC
Confidence            899999999999999999      6  7888888888888887654

>PF07970 COPIIcoated_ERV: Endoplasmic reticulum vesicle transporter ; InterPro: IPR012936 This domain occurs in many hypothetical proteins, and also two partially characterised proteins

Probab=99.89  E-value=2.3e-23  Score=200.46  Aligned_cols=100  Identities=35%  Similarity=0.624  Sum_probs=83.6

Q ss_pred             ccCCCCCCCcCccccccccCCCchhhhccCCCCCCCCCceEEEEEEEeeeeeEEEEeeCCCccCCCcccceeeccCCc-c
Q psy1578         330 SRFLENPSRVNPRTRVAFMAPSLSTFLRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGA-T  408 (440)
Q Consensus       330 ~~~~~~~~~i~qC~~e~~~~~sls~~~~~~~~~~~~eGCrI~G~l~VnKV~Gnfhis~g~~~~~~~~h~h~~~~~~~~-~  408 (440)
                      +...+++..|+||.++ +.       .+.......+|||||+|++.||||+|||||+||+++...+.|+|++...... .
T Consensus        26 ~w~~~~~~~~eQC~~~-~~-------~~~~~~~~~~egCri~G~l~VnkV~Gnfhi~~g~~~~~~~~h~hd~~~~~~~~~   97 (222)
T PF07970_consen   26 GWAFPDLENIEQCRRE-YV-------KKIKEQVNEGEGCRIYGSLEVNKVPGNFHIAPGRSFQQDGGHIHDLSPFDDEPK   97 (222)
T ss_pred             CCCCCCccccccccch-hh-------hhhhhhccCCCCCEEEEEEEEEEEEEEEEEEecchhccCCcceeehhhhccccC
Confidence            3467788899999999 31       1111224567999999999999999999999999988888899997755444 8


Q ss_pred             ccccEEEeEeeecCCCCCCCCCCCCceee
Q psy1578         409 YNFSHRIDKFSFGDPSPGIVHPLESELKV  437 (440)
Q Consensus       409 ~N~SH~I~~lsFG~~~pg~~nPLdg~~~i  437 (440)
                      +||||+|||||||+++|+..|||||+.++
T Consensus        98 ~N~SH~I~~lsFG~~~~~~~~PLdg~~~~  126 (222)
T PF07970_consen   98 FNFSHTINHLSFGEEIPGIVNPLDGTQKI  126 (222)
T ss_pred             CCCCeEEEEEEeccccccccccccCcccc
Confidence            99999999999999999999999999883

One of these proteins, PTX1 Q96RQ1 from SWISSPROT, is a homeodomain-containing transcription factor involved in regulating all pituitary hormone genes []. This protein is down regulated in prostate carcinoma []. The other protein, ERGIC-32 Q969X5 from SWISSPROT, is involved in protein transport from the ER to the Golgi [].

>PF07970 COPIIcoated_ERV: Endoplasmic reticulum vesicle transporter ; InterPro: IPR012936 This domain occurs in many hypothetical proteins, and also two partially characterised proteins

Probab=99.88  E-value=3.4e-23  Score=199.28  Aligned_cols=87  Identities=43%  Similarity=0.678  Sum_probs=79.1

Q ss_pred             CCCCCCceEEEEEEEeeeeeeEEEeeCCCcCCCCceeeeeecCCCC-cccccEEEeEeEecCCCCCCCCCCCCceeE--e
Q psy1578         241 SEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGA-TYNFSHRIDKFSFGDPSPGIVHPLESELKI--T  317 (440)
Q Consensus       241 ~~~~egCrI~Gsl~VnKV~GnfHIs~g~~~~~~~gh~h~~~~~~~~-~~N~SH~I~~lSFG~~~pg~~nPLDg~~~i--~  317 (440)
                      ....|||||+|++.||||+|||||+||+++...++|.|+...+... .+||||+|||||||+.+|++.|||||+.++  +
T Consensus        50 ~~~~egCri~G~l~VnkV~Gnfhi~~g~~~~~~~~h~hd~~~~~~~~~~N~SH~I~~lsFG~~~~~~~~PLdg~~~~~~~  129 (222)
T PF07970_consen   50 VNEGEGCRIYGSLEVNKVPGNFHIAPGRSFQQDGGHIHDLSPFDDEPKFNFSHTINHLSFGEEIPGIVNPLDGTQKIVQT  129 (222)
T ss_pred             ccCCCCCEEEEEEEEEEEEEEEEEEecchhccCCcceeehhhhccccCCCCCeEEEEEEeccccccccccccCccccccC
Confidence            3457999999999999999999999999988888899988766655 899999999999999999999999999994  5


Q ss_pred             eecceeEEec
Q psy1578         318 KEGVRGLANP  327 (440)
Q Consensus       318 ~~~~~~yqYy  327 (440)
                      +...++|+||
T Consensus       130 ~~~~~~~~Yf  139 (222)
T PF07970_consen  130 DNGNYMYQYF  139 (222)
T ss_pred             CCCceeEEEE
Confidence            7788999999

One of these proteins, PTX1 Q96RQ1 from SWISSPROT, is a homeodomain-containing transcription factor involved in regulating all pituitary hormone genes []. This protein is down regulated in prostate carcinoma []. The other protein, ERGIC-32 Q969X5 from SWISSPROT, is involved in protein transport from the ER to the Golgi [].

>KOG2667|consensus

Probab=99.88  E-value=5.7e-23  Score=209.06  Aligned_cols=96  Identities=34%  Similarity=0.597  Sum_probs=83.6

Q ss_pred             CCCCCCCcCccccccccCCCchhhhccCCCCCCCCCceEEEEEEEeeeeeEEEEeeCCCccCCCcccceeeccCCccccc
Q psy1578         332 FLENPSRVNPRTRVAFMAPSLSTFLRKSKPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNF  411 (440)
Q Consensus       332 ~~~~~~~i~qC~~e~~~~~sls~~~~~~~~~~~~eGCrI~G~l~VnKV~Gnfhis~g~~~~~~~~h~h~~~~~~~~~~N~  411 (440)
                      ...++..++||.++++.         ...+...+|||||+|++.||||||||||+||+++...+.|+|+....  .++||
T Consensus       170 ~~~~~~~~~q~~~~~~~---------~~~~~~~geGCRi~G~l~VNKVaGnfHia~g~~~~~~~~h~hd~~~~--~~~n~  238 (379)
T KOG2667|consen  170 DFADEDLIDQCKNEGFT---------NKAAEQKGEGCRIYGQLEVNKVAGNFHIAPGKSSQHSNAHVHDLSLL--DNLNF  238 (379)
T ss_pred             cccCccchhhhcccccc---------cccCCCCCCceEEEEEEEEeeecceEEEccCCCccccccccchhhhc--ccCCc
Confidence            44557889999999874         44457789999999999999999999999999998888999986533  68999


Q ss_pred             cEEEeEeeecCCCCCCCCCCCCceeec
Q psy1578         412 SHRIDKFSFGDPSPGIVHPLESELKVS  438 (440)
Q Consensus       412 SH~I~~lsFG~~~pg~~nPLdg~~~i~  438 (440)
                      ||+|||||||+.+||+.|||||+.+++
T Consensus       239 SH~InhLSFG~~~p~~~nPLdG~~~~~  265 (379)
T KOG2667|consen  239 SHRINHLSFGEYIPGIVNPLDGTNFIA  265 (379)
T ss_pred             eEEEeeeccCCCCcccccCCCCccccc
Confidence            999999999999999999999977764

>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=99.73  E-value=1.7e-18  Score=173.90  Aligned_cols=97  Identities=22%  Similarity=0.364  Sum_probs=86.2

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|++|.++. ..++++++|+|.+++|+||++++..+++                        .+....||||++|.++
T Consensus       109 FL~~~~~~~~~-~~l~~i~~g~y~i~~R~~L~~~v~~~g~------------------------~~~~~~ALNdvvi~r~  163 (306)
T PRK03372        109 FLAEAEAEDLD-EAVERVVDRDYRVEERMTLDVTVRVGGE------------------------IVWRGWALNEASLEKA  163 (306)
T ss_pred             eeccCCHHHHH-HHHHHHHcCCceEEEeeeEEEEEEECCE------------------------EEeeeeEEEeEEeecC
Confidence            58899998887 7888999999999999999999875443                        1234579999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEEe
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISK  126 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~~  126 (440)
                      ..+||++++|+|||+ ++.+|+|||||||||||||||++|+.=
T Consensus       164 ~~~~~~~~~v~idg~-~~~~~~~DGlIVsTPTGSTAYslSAGG  205 (306)
T PRK03372        164 DREGMLEVVLEVDGR-PVSSFGCDGVLVSTPTGSTAYAFSAGG  205 (306)
T ss_pred             CCCcEEEEEEEECCE-EEEEEecCEEEEeCCCchHHHHhhcCC
Confidence            999999999999997 999999999999999999999999753

>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=99.73  E-value=2.8e-18  Score=169.67  Aligned_cols=92  Identities=24%  Similarity=0.257  Sum_probs=82.8

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|++|.++. ...+++++|+|.|++|+||++++.++.                            ...||||++|.++
T Consensus        86 FL~~~~~~~~~-~~l~~i~~g~~~i~~r~~L~~~v~g~~----------------------------~~~aLNdvvv~~~  136 (271)
T PRK01185         86 FLTEIEIDEVG-SAIKKLIRGEYFIDERMKLKVYINGER----------------------------LEDCTNEAVIHTD  136 (271)
T ss_pred             cCcccCHHHHH-HHHHHHHcCCcEEEEeeEEEEEECCcE----------------------------eEEEEEEEEEecC
Confidence            48899998887 778899999999999999999994321                            2359999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEE
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTIS  125 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~  125 (440)
                      ..+||++++++|||+ ++.+++|||||||||||||||++|+-
T Consensus       137 ~~~~~i~~~v~i~~~-~~~~~~~DGlIVsTPTGSTAYslSAG  177 (271)
T PRK01185        137 RIAKIRQFKIYYDGH-FLDTFKADGVIVATPTGSTSYSSSAG  177 (271)
T ss_pred             CCCcEEEEEEEECCE-EEEEEEeeEEEEeCCCchHHHHhhCC
Confidence            999999999999997 99999999999999999999999975

>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=99.72  E-value=3.6e-18  Score=170.27  Aligned_cols=96  Identities=21%  Similarity=0.207  Sum_probs=85.3

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|++|.++. ...+++++|+|.+++|+||++++.+++.                        ......|||||+|.++
T Consensus       101 FLt~~~~~~~~-~~l~~i~~g~y~ie~r~~L~~~v~~~~~------------------------~~~~~~AlNevvi~~~  155 (287)
T PRK14077        101 FLTDITVDEAE-KFFQAFFQGEFEIEKPYMLSVFLEKKQG------------------------KILEKLAFNDVVISKN  155 (287)
T ss_pred             cCCcCCHHHHH-HHHHHHHcCCCeEEEEEEEEEEEEeCCc------------------------eEEEEEEeeeeeeccC
Confidence            58999999988 6888999999999999999999864332                        1133579999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEE
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTIS  125 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~  125 (440)
                      ..+||+.++++|||+ ++++++|||||||||||||||++|+-
T Consensus       156 ~~~~~~~~~v~id~~-~~~~~~~DGlIVSTPTGSTAYslSAG  196 (287)
T PRK14077        156 NQASMAHIEAFLNEK-YFNEYFGDGVIVATPAGSTAYNMSAN  196 (287)
T ss_pred             CCccEEEEEEEECCE-EEEEEEcCEEEEeCCCchhHhHhhcC
Confidence            999999999999997 99999999999999999999999975

>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=99.72  E-value=3.5e-18  Score=170.69  Aligned_cols=96  Identities=14%  Similarity=0.129  Sum_probs=84.6

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|++|.++. ...+++++|+|++++|+||++++.+...                         .....|||||+|.++
T Consensus       101 FLt~~~~~~~~-~~l~~i~~g~~~i~~r~~L~~~~~~~~~-------------------------~~~~~alNdvvi~r~  154 (292)
T PRK01911        101 FLATVSKEEIE-ETIDELLNGDYTIEERSLLQLESNPKLF-------------------------GELNFALNEIAILKR  154 (292)
T ss_pred             cccccCHHHHH-HHHHHHHcCCceEEEEeeEEEEEcCCcc-------------------------eeeeEEEEEEEEecC
Confidence            58999999887 7888999999999999999999743221                         113579999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEEe
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISK  126 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~~  126 (440)
                      ..+||+.++++|||+ ++.+|+|||||||||||||||++|+-=
T Consensus       155 ~~~~~i~~~v~idg~-~~~~~~~DGlIVsTPTGSTAYslSAGG  196 (292)
T PRK01911        155 DTSSMITVHTYLNGE-YLNSYWADGLIVATPTGSTGYSLSCGG  196 (292)
T ss_pred             CCCcEEEEEEEECCE-EEEEEeeceeEECCCCcHHHHHhhCCC
Confidence            999999999999997 999999999999999999999999753

>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=99.72  E-value=3.9e-18  Score=171.30  Aligned_cols=97  Identities=21%  Similarity=0.221  Sum_probs=85.8

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|++|.++. ...++|++|+|++++|+||++++.+++.                        .+....||||++|.++
T Consensus       105 FLt~~~~~~~~-~~l~~l~~g~y~ie~r~~L~~~v~~~~~------------------------~~~~~~ALNevvi~~~  159 (305)
T PRK02649        105 FLTEAYLNQLD-EAIDQVLAGQYTIEERTMLTVSVMRGDQ------------------------LRWEALSLNEMVLHRE  159 (305)
T ss_pred             ccccCCHHHHH-HHHHHHHcCCcEEEEeeeEEEEEEECCc------------------------ceeeeeeeeeeeeecC
Confidence            58999998886 7888999999999999999999864432                        1234579999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEEe
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISK  126 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~~  126 (440)
                      ..+||+.++++|||+ .+.+|+|||||||||||||||++|+.=
T Consensus       160 ~~~~~~~~~v~id~~-~~~~~~~DGlIVsTPTGSTAYslSAGG  201 (305)
T PRK02649        160 PLTSMCHFEIAIGRH-APVDIAADGVILSTPTGSTAYSLSAGG  201 (305)
T ss_pred             CCccEEEEEEEECCE-EEEEEecCeEEEeCCCcHHHHHhhCCC
Confidence            999999999999997 999999999999999999999999763

>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=99.71  E-value=3.3e-18  Score=171.22  Aligned_cols=97  Identities=20%  Similarity=0.196  Sum_probs=85.7

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|++|.++. ...+++++|+|.+++|+||++++..++.                        .+....||||++|.++
T Consensus       105 FL~~~~~~~~~-~~l~~i~~g~~~~~~r~~l~~~v~~~~~------------------------~~~~~~ALNdvvi~~~  159 (296)
T PRK04539        105 FLTQIPREYMT-DKLLPVLEGKYLAEERILIEAALIREGK------------------------TAERALALNDAVLSRG  159 (296)
T ss_pred             EeeccCHHHHH-HHHHHHHcCCceEEEeeeEEEEEEECCe------------------------eeeeeeeehhhhhccC
Confidence            58899998887 6777999999999999999999865443                        1234579999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEEe
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISK  126 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~~  126 (440)
                      ..+||+.++++|||+ ++.+|+|||||||||||||||++|+-=
T Consensus       160 ~~~~~~~~~v~id~~-~~~~~~~DGlIVsTPTGSTAYslSAGG  201 (296)
T PRK04539        160 GAGQMIEFEVFVNRE-FVYTQRSDGLIVSTPTGSTAYSLAAGG  201 (296)
T ss_pred             CcCceEEEEEEECCE-EEEEEecCeEEEECCCcHHHHHhhCCC
Confidence            999999999999997 999999999999999999999999764

>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=99.70  E-value=1e-17  Score=167.62  Aligned_cols=96  Identities=22%  Similarity=0.258  Sum_probs=85.5

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|++|.++. ...+++++|+|+|++|+||++.+.+.+.                        .+...+||||++|.++
T Consensus        99 Fl~~~~~~~~~-~~l~~~~~g~~~i~~r~~L~~~v~~~~~------------------------~~~~~~ALNevvi~~~  153 (295)
T PRK01231         99 FLTDIRPDELE-FKLAEVLDGHYQEEERFLLEAEVRRGGE------------------------VIGQGDALNDVVLHPG  153 (295)
T ss_pred             ccccCCHHHHH-HHHHHHHcCCceEEEEEEEEEEEEECCc------------------------EEeeeeEEEEEEEccC
Confidence            58899998888 7788999999999999999999875432                        2235689999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEE
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTIS  125 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~  125 (440)
                      ..++|+.++|+|||+ .+.+++|||||||||||||||++|+-
T Consensus       154 ~~~~~~~~~v~id~~-~~~~~~~DGlivsTptGSTAY~lSAG  194 (295)
T PRK01231        154 KSTRMIEFELYIDGQ-FVCSQRSDGLIVSTPTGSTAYALSGG  194 (295)
T ss_pred             CCCcEEEEEEEECCE-EEEEEEcceEEEeCCCCchhhhhhcC
Confidence            999999999999997 89999999999999999999999984

>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional

Probab=99.69  E-value=1.4e-17  Score=166.30  Aligned_cols=97  Identities=21%  Similarity=0.255  Sum_probs=85.0

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|+.|.++- ...+++++|+|++++|+||++++..+++                        .+...+||||++|.++
T Consensus       100 FL~~~~~~~~~-~~l~~~~~g~~~i~~r~~L~~~v~~~~~------------------------~~~~~~AlNev~v~~~  154 (291)
T PRK02155        100 FITDIPLDDMQ-ETLPPMLAGNYEEEERMLLEARVVRDGE------------------------PIFHALAFNDVVVNRS  154 (291)
T ss_pred             ccccCCHHHHH-HHHHHHHcCCceEEEeEEEEEEEEECCe------------------------EEEeeeeeeheeeccC
Confidence            57888888877 6778999999999999999999864332                        1234579999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEEe
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISK  126 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~~  126 (440)
                      ..+||+.++|+|||+ .+.+++|||||||||||||||++|+.=
T Consensus       155 ~~~~~~~~~v~i~~~-~~~~~~gDGlIVsTPtGSTAYslSaGG  196 (291)
T PRK02155        155 GFSGMVELRVSVDGR-FMYNQRSDGLIVATPTGSTAYALSAGG  196 (291)
T ss_pred             CCCceEEEEEEECCE-EEEEEecCeEEEECCCchhhhhhhcCC
Confidence            999999999999997 899999999999999999999999864

>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=99.68  E-value=2.2e-17  Score=163.37  Aligned_cols=97  Identities=23%  Similarity=0.216  Sum_probs=82.7

Q ss_pred             CCCCCCCCCccCChhhhccC-CCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeec
Q psy1578           4 TLPENEPKDFHILPELALND-GKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGE   82 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~-G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~   82 (440)
                      .|+|.+|.++. ...+++++ |+|++++|+||++++..++.                        .+....||||++|.+
T Consensus        79 FL~~~~~~~~~-~~l~~~~~~g~~~i~~r~~L~~~v~~~~~------------------------~~~~~~alNev~i~~  133 (272)
T PRK02231         79 FLTDIDPKNAY-EQLEACLERGEFFVEERFLLEAKIERNGK------------------------IIATSNALNEVVIHP  133 (272)
T ss_pred             ccccCCHHHHH-HHHHHHHhcCCceEEEeeeEEEEEEECCe------------------------EeeeeEEEEEEEEec
Confidence            58899998776 45556666 99999999999999864332                        123457999999999


Q ss_pred             cCcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEEe
Q psy1578          83 YNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISK  126 (440)
Q Consensus        83 ~~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~~  126 (440)
                      +..+||+.++|+|||+ ++.+++|||||||||||||||++|+-=
T Consensus       134 ~~~~~~~~~~v~i~~~-~~~~~~~DGlIVsTPtGSTAY~lSAGG  176 (272)
T PRK02231        134 AKIAHMIDFHVYIDDK-FAFSQRSDGLIISTPTGSTAYSLSAGG  176 (272)
T ss_pred             CCCCceEEEEEEECCE-EEEEEecCeEEEECCCcHHHHHhhCCC
Confidence            9999999999999997 999999999999999999999999753

>PLN02935 Bifunctional NADH kinase/NAD(+) kinase

Probab=99.68  E-value=2.3e-17  Score=173.44  Aligned_cols=101  Identities=20%  Similarity=0.243  Sum_probs=85.9

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|+.|.++. ..+++|++|+|.+++|+||++++.+.+...                   ........+|||||+|.++
T Consensus       299 FLt~i~~~e~~-~~Le~il~G~y~Ie~R~~L~~~v~~~~~~~-------------------~~~~~~~~~ALNEvvI~rg  358 (508)
T PLN02935        299 FMTPFHSEQYR-DCLDAILKGPISITLRHRLQCHIIRDAAKN-------------------EYETEEPILVLNEVTIDRG  358 (508)
T ss_pred             eecccCHHHHH-HHHHHHHcCCceEEEEeEEEEEEEcCCcee-------------------cccccccceeccceEEecC
Confidence            48999999987 788899999999999999999987544210                   0011134579999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEE
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTIS  125 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~  125 (440)
                      ..++|+.++|+|||+ ++.+|+|||||||||||||||+||+-
T Consensus       359 ~~~~~i~l~V~Idg~-~v~~~rgDGLIVSTPTGSTAYsLSAG  399 (508)
T PLN02935        359 ISSFLTNLECYCDNS-FVTCVQGDGLILSTTSGSTAYSLAAG  399 (508)
T ss_pred             CCceEEEEEEEECCE-eEEEEECCcEEEecCccHHHHHHhcC
Confidence            999999999999997 99999999999999999999999874

>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=99.67  E-value=4.5e-17  Score=161.72  Aligned_cols=93  Identities=26%  Similarity=0.308  Sum_probs=83.0

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|.+|.++. ...+++++|+|.+++|++|++++.+  +                          ....||||++|.++
T Consensus        93 Fl~~~~~~~~~-~~l~~i~~g~~~~~~r~~l~~~~~~--~--------------------------~~~~alNdv~v~~~  143 (277)
T PRK03708         93 FLTEVEPEETF-FALSRLLEGDYFIDERIKLRVYING--E--------------------------NVPDALNEVVILTG  143 (277)
T ss_pred             ccccCCHHHHH-HHHHHHHcCCceEEEeEEEEEEECC--e--------------------------EeEEEeeeEEEecC
Confidence            57888888877 7888999999999999999999843  2                          12469999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEEe
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISK  126 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~~  126 (440)
                      ..+||+.++|+|||+ .+.+++|||||||||||||||++|+.=
T Consensus       144 ~~~~~~~~~v~idg~-~~~~~~gDGvIvsTptGSTAY~lSaGG  185 (277)
T PRK03708        144 IPGKIIHLKYYVDGE-LADEVRADGLIISTPTGSTAYAMSAGG  185 (277)
T ss_pred             CCCcEEEEEEEECCE-EEEEEecCEEEEeCCCchHHHHhhCCC
Confidence            999999999999997 899999999999999999999999753

>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=99.66  E-value=5.2e-17  Score=160.27  Aligned_cols=94  Identities=16%  Similarity=0.175  Sum_probs=81.1

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|++|.++. ...++|++|+|.+++|++|++++...+.                        ......||||++|.++
T Consensus        74 FL~~~~~~~~~-~~l~~i~~g~y~i~~r~~L~~~v~~~~~------------------------~~~~~~alNev~i~~~  128 (265)
T PRK04885         74 FYTDWRPFEVD-KLVIALAKDPGQVVSYPLLEVKITYEDG------------------------EKEKYLALNEATIKRI  128 (265)
T ss_pred             ecccCCHHHHH-HHHHHHHcCCceEEEEeeEEEEEEeCCC------------------------cEeeeeeeeeeeeccC
Confidence            58899998876 6788999999999999999999863222                        1123579999999987


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEE
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTIS  125 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~  125 (440)
                      .  +++.++++|||+ ++.+++|||||||||||||||++|+.
T Consensus       129 ~--~~~~~~v~id~~-~~~~~~gDGlIVsTptGSTAYslSaG  167 (265)
T PRK04885        129 E--GTLVADVYINGV-LFERFRGDGLCVSTPTGSTAYNKSLG  167 (265)
T ss_pred             C--ceEEEEEEECCE-EEEEEEcCEEEEECCCChHHHHhhCC
Confidence            4  899999999997 99999999999999999999999974

>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=99.66  E-value=6.9e-17  Score=159.27  Aligned_cols=91  Identities=18%  Similarity=0.180  Sum_probs=80.4

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|.+|.++. ...+++++|+|.+++|++|++++.+..                            ...||||++| ++
T Consensus        78 FL~~~~~~~~~-~~l~~i~~g~~~~~~r~~l~~~v~~~~----------------------------~~~alNevvi-~~  127 (264)
T PRK03501         78 FYCDFHIDDLD-KMIQAITKEEIEVRKYPTIEVTVDGST----------------------------SFYCLNEFSI-RS  127 (264)
T ss_pred             EcccCCHHHHH-HHHHHHHcCCcEEEEeeeEEEEECCcc----------------------------ceEEEEEEEE-cC
Confidence            58899998877 677899999999999999999984311                            2479999999 88


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEE
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTIS  125 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~  125 (440)
                      ..+||+.++|+|||. ++.+++|||||||||||||||++|+.
T Consensus       128 ~~~~~~~~~v~id~~-~~~~~~~DGlIVsTPtGSTAY~lSAG  168 (264)
T PRK03501        128 SIIKTFVIDVYIDDL-HFETFRGDGMVVSTPTGSTAYNKSVR  168 (264)
T ss_pred             CCCceEEEEEEECCE-EeEEEecCEEEEeCCCchHHHHhhcC
Confidence            889999999999997 99999999999999999999999874

>PLN02929 NADH kinase

Probab=99.66  E-value=6e-17  Score=161.91  Aligned_cols=94  Identities=28%  Similarity=0.326  Sum_probs=82.5

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|..|.++- ..++++++|+|.|++|+||++++.+..                           ....|||||+|.++
T Consensus       118 fL~~~~~~~~~-~~L~~il~g~~~~~~r~~L~~~v~g~~---------------------------~~~~ALNEv~I~~~  169 (301)
T PLN02929        118 HLCAATAEDFE-QVLDDVLFGRLKPTELSRISTVVNGTL---------------------------LETPALNDVLIAHP  169 (301)
T ss_pred             ccccCCHHHHH-HHHHHHHcCCceEEEeeeEEEEecCCc---------------------------ccceEeeEEEEccC
Confidence            47888888766 677899999999999999999995432                           22379999999999


Q ss_pred             CcccEEEEEEEEC-----CccceeeEeecceEEEcccccceeEEEEEe
Q psy1578          84 NSALVSKLIISCD-----SHVPAKQIKCSGMCINTGSGSTAWYYTISK  126 (440)
Q Consensus        84 ~~~~~~~~~~~id-----~~~~~~~~~~dGliv~t~tgst~~~~s~~~  126 (440)
                      ..++|++|+++||     |. .+..++|||||||||||||||++|+-=
T Consensus       170 ~~~~~~~~~v~i~~~g~~~~-~~~~~~~DGliVsTpTGSTAY~lSAGG  216 (301)
T PLN02929        170 SPAAVSRFSFRVGRQGGSSG-PLINVRSSGLRVSTAAGSTAAMLSAGG  216 (301)
T ss_pred             CCccEEEEEEEEcCccCCCc-eeEEeecCcEEEeCCccHHHHHHhcCC
Confidence            9999999999999     86 899999999999999999999999643

>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=99.66  E-value=7.8e-17  Score=161.09  Aligned_cols=97  Identities=19%  Similarity=0.193  Sum_probs=85.2

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|++|.++. ...+++++|+|.+++|++|++++.+.+.                        ......||||++|.++
T Consensus       100 Fl~~~~~~~~~-~~l~~i~~g~~~i~~r~~L~~~v~~~~~------------------------~~~~~~aLNdvvi~~~  154 (292)
T PRK03378        100 FLTDLDPDNAL-QQLSDVLEGHYISEKRFLLEAQVCRHGQ------------------------QKRISTAINEVVLHPG  154 (292)
T ss_pred             cccccCHHHHH-HHHHHHHcCCceEEEEEEEEEEEEeCCc------------------------eEEeEEEEEEEEEccC
Confidence            58899998877 6777999999999999999999865432                        1234579999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEEe
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISK  126 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~~  126 (440)
                      ..+||+.++|+|||+ ++.++++||||||||||||||++|+-=
T Consensus       155 ~~~~~i~~~v~idg~-~~~~~~~DGlIvsTptGSTAYslSAGG  196 (292)
T PRK03378        155 KVAHMIEFEVYIDDN-FAFSQRSDGLIISTPTGSTAYSLSAGG  196 (292)
T ss_pred             CCccEEEEEEEECCE-EEEEEEccEEEEeCCCchHHhHhhcCC
Confidence            999999999999997 999999999999999999999998753

>COG0061 nadF NAD kinase [Coenzyme metabolism]

Probab=99.65  E-value=1.5e-16  Score=158.34  Aligned_cols=94  Identities=24%  Similarity=0.317  Sum_probs=82.7

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|++..|.... ...+++++|+|++++|++|++++.+.+.                          ...+|||||+|.++
T Consensus        92 FLt~~~~~~~~-~~~~~~~~~~~~~~~r~~l~~~v~~~~~--------------------------~~~~aLNEv~I~~~  144 (281)
T COG0061          92 FLTDFEPDELE-KALDALLEGEYRIEERLLLEVSVNRGDI--------------------------RRALALNEVVIHRG  144 (281)
T ss_pred             cccccCHHHHH-HHHHHHhcCceEEEEeEEEEEEEEeCCc--------------------------cccceeeEEEEecC
Confidence            47888877776 5566777799999999999999986431                          45789999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEE
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTIS  125 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~  125 (440)
                      ..++|+.+++++||. ++++++|||||||||||||||++|+.
T Consensus       145 ~~~~~~~~~v~id~~-~~~~~r~DGliVsTPTGSTAY~lSAG  185 (281)
T COG0061         145 SPAKMIEFEVYIDDE-FFESFRGDGLIVSTPTGSTAYNLSAG  185 (281)
T ss_pred             CCCcEEEEEEEECCE-EEEEEecCEEEEEcCCcHHHHhhhcC
Confidence            999999999999997 99999999999999999999999864

>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=99.63  E-value=2.3e-16  Score=170.76  Aligned_cols=97  Identities=20%  Similarity=0.256  Sum_probs=85.5

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|.+|.++. ..++++++|+|.+++|+||++++.+.+.                        ......|||||+|.++
T Consensus       385 FL~~~~~~~~~-~~l~~~~~g~~~i~~r~~L~~~v~~~~~------------------------~~~~~~alNdv~i~~~  439 (569)
T PRK14076        385 FLTEFSKEEIF-KAIDSIISGEYEIEKRTKLSGFILKDGH------------------------QNILPSALNEVVITTK  439 (569)
T ss_pred             cCcccCHHHHH-HHHHHHHcCCceEEEeEEEEEEEEECCc------------------------ceeeeEEEEEEEEccC
Confidence            58899998887 6888999999999999999999875432                        1134579999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEEe
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISK  126 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~~  126 (440)
                      ..+||+.++|+|||+ ++.+++|||||||||||||||++|+-=
T Consensus       440 ~~~~~~~~~v~i~~~-~~~~~~~DGlivsTptGSTaYslSAGG  481 (569)
T PRK14076        440 NPAKMLHFEVYVNGE-LVEEVRADGIIISTPTGSTAYSLSAGG  481 (569)
T ss_pred             CCCceEEEEEEECCE-EEEEEECCEEEEeCCCchHHHHhhCCC
Confidence            999999999999997 999999999999999999999999753

>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=99.63  E-value=2.6e-16  Score=154.66  Aligned_cols=92  Identities=22%  Similarity=0.239  Sum_probs=81.8

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|.+|.++- ...+++++|+|.+++|++|++++.+.                             ...||||++|.++
T Consensus        75 fl~~~~~~~~~-~~l~~~~~g~~~~~~r~~l~~~~~~~-----------------------------~~~alNev~i~~~  124 (256)
T PRK14075         75 FLSSYTLEEID-RFLEDLKNWNFREEKRWFLKIESELG-----------------------------NHLALNDVTLERD  124 (256)
T ss_pred             cccccCHHHHH-HHHHHHHcCCcEEEEeeEEEEEEcCC-----------------------------cEEEEEEEEEecC
Confidence            48888888876 67778999999999999999998521                             1469999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEEe
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTISK  126 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~~  126 (440)
                      ..+++++++|++||+ .+.+++|||||||||||||||++|+.=
T Consensus       125 ~~~~~~~~~v~i~~~-~~~~~~~DG~ivsTptGSTaY~lSaGG  166 (256)
T PRK14075        125 PSQKMVEIEVSFEDH-SSMWFFADGVVISTPTGSTAYSLSLGG  166 (256)
T ss_pred             CCCcEEEEEEEECCE-EEEEEecCEEEEeCCCchHHHHhhCCC
Confidence            999999999999996 889999999999999999999999764

>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=99.61  E-value=6.6e-16  Score=155.36  Aligned_cols=91  Identities=20%  Similarity=0.194  Sum_probs=74.7

Q ss_pred             ChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeeccCcccEEE--EEE
Q psy1578          16 LPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEYNSALVSK--LII   93 (440)
Q Consensus        16 ~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~~~~~~~~--~~~   93 (440)
                      ...++|++|+|.|++|+||++++.+.++.                   ..........||||++|.++..++++.  ++|
T Consensus       107 ~~l~~i~~g~~~i~~r~~L~~~~~~~~~~-------------------~~~~~~~~~~AlNev~i~~~~~~~~~~~~~~v  167 (305)
T PRK02645        107 SVWDRLQEDRYAIERRMMLQARVFEGDRS-------------------NEEPVSESYYALNDFYLKPASEDRSPTCILEL  167 (305)
T ss_pred             HHHHHHHcCCceEEEeeEEEEEEEeCCcc-------------------cccccccceEEEeeEEEeccCcccccceEEEE
Confidence            56678999999999999999998643320                   000112346899999999998889865  999


Q ss_pred             EECCccceeeEeecceEEEcccccceeEEEEEe
Q psy1578          94 SCDSHVPAKQIKCSGMCINTGSGSTAWYYTISK  126 (440)
Q Consensus        94 ~id~~~~~~~~~~dGliv~t~tgst~~~~s~~~  126 (440)
                      +|||+ .+.+++|||||||||||||||++|+.=
T Consensus       168 ~id~~-~~~~~~gDGlIVsTPtGSTAYslSAGG  199 (305)
T PRK02645        168 EIDGE-VVDQYQGDGLIVSTPTGSTAYTMAAGG  199 (305)
T ss_pred             EECCE-EEEEEecCEEEEecCCChhhhhhhcCC
Confidence            99997 899999999999999999999999864

>PLN02727 NAD kinase

Probab=99.57  E-value=1.7e-15  Score=167.20  Aligned_cols=98  Identities=19%  Similarity=0.166  Sum_probs=84.3

Q ss_pred             CCCCCCCCCccCChhhhccCCCeee-----EEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceee
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKN-----LYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDV   78 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~-----~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev   78 (440)
                      .|++++|.++. ..++++++|+|.+     +.|+||++++.+++...                      ......|||||
T Consensus       780 FLTdi~~ee~~-~~L~~Il~G~y~i~~~~ie~R~~L~~~V~r~g~~i----------------------~~~~~~ALNEV  836 (986)
T PLN02727        780 FLTSHYFEDFR-QDLRQVIHGNNTLDGVYITLRMRLRCEIFRNGKAM----------------------PGKVFDVLNEV  836 (986)
T ss_pred             ccccCCHHHHH-HHHHHHHcCCccccccccceeeEEEEEEecCCccc----------------------ccccceEEEEE
Confidence            58999999988 7778899999965     89999999997554310                      00134799999


Q ss_pred             EeeccCcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEE
Q psy1578          79 YVGEYNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTIS  125 (440)
Q Consensus        79 ~i~~~~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~  125 (440)
                      +|.++..++|+.++|+|||+ ++++++|||||||||||||||++|+-
T Consensus       837 VI~Rg~~~~mi~ieVyIDg~-~l~tyrgDGLIVSTPTGSTAYSLSAG  882 (986)
T PLN02727        837 VVDRGSNPYLSKIECYEHDR-LITKVQGDGVIVATPTGSTAYSTAAG  882 (986)
T ss_pred             EEecCCCccEEEEEEEECCE-EeEEeecceEEEECCCchHHhHhhcC
Confidence            99999999999999999997 99999999999999999999999975

>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2

Probab=99.50  E-value=9.7e-15  Score=145.36  Aligned_cols=97  Identities=24%  Similarity=0.294  Sum_probs=85.4

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|++..|.++. ...+++++|+|.+++|+||++++.+...                      .+......||||++|.++
T Consensus       113 fl~~~~~~~~~-~~l~~~~~g~~~~~~r~~l~~~~~~~~~----------------------~~~~~~~~alNei~i~~~  169 (285)
T PF01513_consen  113 FLTEFEPEDIE-EALEKILAGEYSIEERMRLEVSVDRKKG----------------------AEIALIDYALNEIVISRG  169 (285)
T ss_dssp             SSSSEEGCGHH-HHHHHHHHTHCEEEEEEEEEEEEEETTE-----------------------CEEEEEEESSEEEEEES
T ss_pred             ccccCCHHHHH-HHHHHHhcCCeEEEEeeeEEEEEecCCc----------------------cceeeeeeeecCeeEEcC
Confidence            57888888887 6677888999999999999999986542                      123467789999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEE
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTI  124 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~  124 (440)
                      ..++++.+++++|+. ++.++++||||||||||||||++|+
T Consensus       170 ~~~~~~~~~v~i~~~-~~~~~~~dGlivsTptGSTay~lSa  209 (285)
T PF01513_consen  170 RASRMIELEVFIDGE-FLETYRGDGLIVSTPTGSTAYSLSA  209 (285)
T ss_dssp             STSSEEEEEEEETTE-EEEEEEESEEEEEETGGGGTHHHHT
T ss_pred             CCccceEEEEEECCE-EEEEEEEeeeEEEecCCceEEEEec
Confidence            999999999999997 8999999999999999999999985

7.1.23 from EC. The enzymes catalyse the phosphorylation of NAD to NADP utilizing ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus.; GO: 0003951 NAD+ kinase activity, 0008152 metabolic process; PDB: 1U0T_B 1U0R_D 1Y3H_A 1Y3I_A 3AFO_B 1YT5_B 2AN1_A 2I2A_A 3V8P_A 2I1W_A ....

>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional

Probab=99.47  E-value=2.2e-14  Score=141.12  Aligned_cols=87  Identities=20%  Similarity=0.136  Sum_probs=73.1

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|++|.++.....++|.+  |.+++|++|++.+.+.                             ...||||++|.++
T Consensus        70 FL~~~~~~~~~~~~~~~l~~--~~~~~r~~L~~~~~~~-----------------------------~~~AlNE~vi~~~  118 (259)
T PRK00561         70 FYTSFNETDLDQNFANKLDQ--LKFTQIDLLEVQIDDQ-----------------------------IHLVLNELAVYTN  118 (259)
T ss_pred             cccccCHHHHHHHHHHHHhh--CCeEEEEEEEEEECCC-----------------------------eeEEEEEEEEccC
Confidence            58899998887335666655  7889999999998431                             1469999999986


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEE
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTIS  125 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~  125 (440)
                      .   ++.++|+|||+ ++.+++|||||||||||||||++|+-
T Consensus       119 ~---~~~~~v~idg~-~~~~~~gDGlIVsTPtGSTAYslSAG  156 (259)
T PRK00561        119 T---AYPINIFIDNE-FWEKYRGSGLLIGPRTGSTALAKSAK  156 (259)
T ss_pred             C---ceEEEEEECCE-EEEEEecCEEEEeCchHHHHHHHhCC
Confidence            5   68999999997 89999999999999999999999864

>KOG2178|consensus

Probab=99.40  E-value=2.4e-13  Score=138.20  Aligned_cols=86  Identities=21%  Similarity=0.310  Sum_probs=73.6

Q ss_pred             hccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeeccCcccEEEEEEEECCcc
Q psy1578          20 ALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEYNSALVSKLIISCDSHV   99 (440)
Q Consensus        20 ~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~~~~~~~~~~~~id~~~   99 (440)
                      .++.|+..+..||||||++.+.....                .+.   -.....+||||+|.+|...-|+.+++|+||+ 
T Consensus       220 ~v~~~~~~v~lR~RL~C~i~rk~~~~----------------~~~---~~~~~~vLNEvvIdRGpsP~ls~l~ly~d~~-  279 (409)
T KOG2178|consen  220 RVLNGRAAVNLRMRLRCSLKRKDLAE----------------KTH---AASSHYVLNEVVIDRGPSPFLSNLDLYVDDK-  279 (409)
T ss_pred             HHhcCcceEeeeeeEEEEEEEecccc----------------ccc---ccceEEEeeeEEEccCCCchhcceeEEecCc-
Confidence            78899999999999999998754310                000   1226789999999999999999999999996 


Q ss_pred             ceeeEeecceEEEcccccceeEEEEE
Q psy1578         100 PAKQIKCSGMCINTGSGSTAWYYTIS  125 (440)
Q Consensus       100 ~~~~~~~dGliv~t~tgst~~~~s~~  125 (440)
                      ++++..+||||||||||||||++++-
T Consensus       280 ~iT~vq~DGliVaTPTGSTAYS~sAG  305 (409)
T KOG2178|consen  280 LITKVQGDGLIVATPTGSTAYSASAG  305 (409)
T ss_pred             EEEEEecceEEEecCCchhhhHhhcC
Confidence            99999999999999999999998764

>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed

Probab=99.30  E-value=1.9e-12  Score=126.60  Aligned_cols=53  Identities=30%  Similarity=0.435  Sum_probs=48.9

Q ss_pred             ccccceeeEeeccCcccEEEEEEEECCccc-eeeEeecceEEEcccccceeEEEEE
Q psy1578          71 PELALNDVYVGEYNSALVSKLIISCDSHVP-AKQIKCSGMCINTGSGSTAWYYTIS  125 (440)
Q Consensus        71 ~~~alNev~i~~~~~~~~~~~~~~id~~~~-~~~~~~dGliv~t~tgst~~~~s~~  125 (440)
                      ...||||++|.++. .+++.++|+|||+ . +.+++|||||||||||||||++|+.
T Consensus       100 ~~~ALNev~i~~~~-~~~~~~~v~idg~-~~~~~~~gDGlIVSTPtGSTAY~lSAG  153 (246)
T PRK04761        100 EALAINEVSLFRQT-RQAAKLRISIDGK-VRMEELVCDGVLVATPAGSTAYNLSAH  153 (246)
T ss_pred             eeeeeeheeeecCC-CceEEEEEEECCE-EEEEEEecCeEEEeCCcCHHHHHhhCC
Confidence            45799999999987 7899999999997 6 8999999999999999999999975

>PF13850 ERGIC_N: Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)

Probab=97.30  E-value=5.1e-06  Score=70.26  Aligned_cols=70  Identities=13%  Similarity=0.028  Sum_probs=57.2

Q ss_pred             eeEeecceEEEcccccceeEEEEEecchhhhhhhhhccCCCCCCccHHHHHHHhcccccCCCCCccceecccccchhhc
Q psy1578         102 KQIKCSGMCINTGSGSTAWYYTISKLSEAKVNQLLTLSGLDTSGCNVAEITERYNKSLQFSPGLGADIIDSTNQNMILF  180 (440)
Q Consensus       102 ~~~~~dGliv~t~tgst~~~~s~~~~s~~~V~~ll~i~~~~~~~~~~~~It~~fn~~l~~c~~L~vDv~D~tgd~~~~~  180 (440)
                      -+.-+-.+|+.++.+|+.+|++.....++.|+.  ..  -++.+++ .+|+  | +++ ||..|++|++|++|++..+.
T Consensus        25 iSi~~~~~~~~L~~~E~~~y~~~~~~~~~~VD~--~~--~~~l~in-~dit--f-~~~-pC~~l~vDv~D~~G~~~~dv   94 (96)
T PF13850_consen   25 ISIITIVLIVILFISELYSYLSGEIKYQLVVDT--SR--DEKLQIN-FDIT--F-PHM-PCDFLSVDVQDASGDHQLDV   94 (96)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcccceeEEEEEcC--CC--CceEEEE-EEEE--E-CCC-ccCeeeeEeEccCCCeeccc
Confidence            356677788999999999999999999999988  21  1445566 7788  8 665 99999999999999988764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	440
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
3pfn_A	365	NAD kinase; structural genomics consortium, SNP, S	7e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 2e-06
 Identities = 76/488 (15%), Positives = 131/488 (26%), Gaps = 159/488 (32%)

Query: 3   RTLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLR---GNTTSHS-----LHSDNPPS 54
            +  E   + F +   L +N   YK L  + IK   R     T  +      L++DN   
Sbjct: 72  LSKQEEMVQKF-VEEVLRIN---YKFLM-SPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF 126

Query: 55  RPRTLPENEPKDFHILPELALNDVYVGEYNSALVSKLIISCDSHVPAKQIKCSGMCINTG 114
               +   +P                 +   AL  +L        PAK +   G+    G
Sbjct: 127 AKYNVSRLQP---------------YLKLRQAL-LELR-------PAKNVLIDGV---LG 160

Query: 115 SGSTAWYYTISKLSEAKVNQLLTLSG----LDTSGCNVAE-ITERYNK-SLQFSPGLGAD 168
           SG T     +      KV     +      L+   CN  E + E   K   Q  P     
Sbjct: 161 SGKTW--VALDVCLSYKV--QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW-TS 215

Query: 169 IIDSTNQNMILFGELQEEDTWFELEPAQKSYFDSMQHVNSYLQEEFHAVQNLLWKSRFIS 228
             D ++   +    +Q E          +    S  + N  L      V   +  ++  +
Sbjct: 216 RSDHSSNIKLRIHSIQAEL---------RRLLKSKPYENCLL------VLLNVQNAKAWN 260

Query: 229 TFTELPKRKSKPSEPPD-ACRI-----------------HGSLTLNKVAGNLHVTAGKSL 270
            F              + +C+I                    ++L+  +  L     KSL
Sbjct: 261 AF--------------NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306

Query: 271 ----------ALP----GGH-IHLTMFGLGATYNFSHRIDKFSFGDPSPGIVHPLESEL- 314
                      LP      +   L++    +  +     D +          H    +L 
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLSIIAE-SIRDGLATWDNWK---------HVNCDKLT 356

Query: 315 KITKEGVRGLANPFESR--------FLEN---PSRV------NPRTRVAFMAPSLSTFLR 357
            I +  +  L  P E R        F  +   P+ +      +       +   ++   +
Sbjct: 357 TIIESSLNVL-EPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMV--VVNKLHK 413

Query: 358 KS--KPSEPPDACRIHGSLTLNKVAGNLHVTAGKSLALPGGHIHLTMFGLGATYNFSHRI 415
            S  +         I   + L      L V      AL   H  +        YN     
Sbjct: 414 YSLVEKQPKESTISIPS-IYL-----ELKVKLENEYAL---HRSIV-----DHYNIPKTF 459

Query: 416 DKFSFGDP 423
           D      P
Sbjct: 460 DSDDLIPP 467

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.7 bits (115), Expect = 4e-06
 Identities = 49/340 (14%), Positives = 90/340 (26%), Gaps = 104/340 (30%)

Query: 141 LDTSGCNVAEITERYNKSLQ-FSPGLGAD-----IIDSTNQNMILFGE-----LQEEDT- 188
           +D       E   +Y   L  F      +     + D      IL  E     +  +D  
Sbjct: 7   MDF---ETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKS--ILSKEEIDHIIMSKDAV 61

Query: 189 -------W-FELEPAQ--KSYFDSMQHVN-SYLQEEFHAV--QNLLWKSRFISTFTELPK 235
                  W    +  +  + + + +  +N  +L         Q  +    +I     L  
Sbjct: 62  SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRL-Y 120

Query: 236 RKSKPSEPPDACRIHGSLTLNKVAGNL----HVT------AGKS-LAL-----------P 273
             ++     +  R+   L L +    L    +V       +GK+ +AL            
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180

Query: 274 GGHIH-LTMFG--------LGATYNFSHRIDK--FSFGDPSPGIVHPLES------ELKI 316
              I  L            L       ++ID    S  D S  I   + S       L  
Sbjct: 181 DFKIFWLN-LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239

Query: 317 TKEGVRGL-----------ANPFE--------SRFLENPSRVNPRTRVAF--------MA 349
           +K     L            N F         +RF +    ++  T            + 
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT 299

Query: 350 PS-----LSTFLRKSKPSEPPDACRIHGSLTLNKVAGNLH 384
           P      L  +L       P +    +    L+ +A ++ 
Sbjct: 300 PDEVKSLLLKYLDCRPQDLPREVLTTN-PRRLSIIAESIR 338

>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens} Length = 365

 Score = 43.6 bits (103), Expect = 7e-05
 Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 5/105 (4%)

Query: 23  DGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPE--LALNDVYV 80
           +G    + R+R+KV +            N      +       D          LN+V +
Sbjct: 163 EGNAAVVLRSRLKVRVVKELRGKKTAVHNGLGEKGSQAAGLDMDVGKQAMQYQVLNEVVI 222

Query: 81  GEYNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTIS 125
               S+ +S + +  D H     ++  G+ ++T +GSTA  Y  +
Sbjct: 223 DRGPSSYLSNVDVYLDGH-LITTVQGDGVIVSTPTGSTA--YAAA 264

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	440
3pfn_A	365	NAD kinase; structural genomics consortium, SNP, S	99.71
3afo_A	388	NADH kinase POS5; alpha/beta+BETA sandwich, ATP-bi	99.66
1z0s_A	278	Probable inorganic polyphosphate/ATP-NAD kinase; A	99.62
1u0t_A	307	Inorganic polyphosphate/ATP-NAD kinase; alpha-beta	99.49
2i2c_A	272	Probable inorganic polyphosphate/ATP-NAD kinase 1;	99.43
1yt5_A	258	Inorganic polyphosphate/ATP-NAD kinase; domain 1:	99.43
2an1_A	292	Putative kinase; structural genomics, PSI, protein	99.42

>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}

Probab=99.71  E-value=1.1e-18  Score=177.59  Aligned_cols=120  Identities=18%  Similarity=0.209  Sum_probs=85.7

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCc--cccCCCCCCCCCCCCCCCCCCCCccccccccceeeEee
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTT--SHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVG   81 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~   81 (440)
                      .|+|..|.++. ...+++++|+|++++|+||++++.+...  ...+|..+..............++.+....|||||+|.
T Consensus       145 FLt~~~~~~~~-~~l~~vl~g~~~v~~R~~L~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ALNEvvI~  223 (365)
T 3pfn_A          145 FLTPFSFENFQ-SQVTQVIEGNAAVVLRSRLKVRVVKELRGKKTAVHNGLGEKGSQAAGLDMDVGKQAMQYQVLNEVVID  223 (365)
T ss_dssp             TTCCEESTTHH-HHHHHHHHSCCBEEEECCEEEEEEC-----------------------------CEEEEEESSEEEEE
T ss_pred             cceeecHHHHH-HHHHHHHcCCCeEEEEeeEEEEEEeccccccccccccccccccccccccccCCceeeccCccceEEEe
Confidence            58999999888 6778999999999999999999975321  11111111000000000001122334567899999999


Q ss_pred             ccCcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEE
Q psy1578          82 EYNSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTIS  125 (440)
Q Consensus        82 ~~~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~  125 (440)
                      ++..++|++|+|+|||+ ++++++|||||||||||||||++|+-
T Consensus       224 r~~~~~m~~~~v~idg~-~~~~~~aDGlIVSTPTGSTAYslSAG  266 (365)
T 3pfn_A          224 RGPSSYLSNVDVYLDGH-LITTVQGDGVIVSTPTGSTAYAAAAG  266 (365)
T ss_dssp             CTTCSSCCCEEEEETTE-EEEEECSSEEEEECGGGGGTHHHHTT
T ss_pred             cCCCCcEEEEEEEECCE-EEEEEecCeEEEeCCccHHHHHHhCC
Confidence            99999999999999997 99999999999999999999999863

>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}

Probab=99.66  E-value=2.9e-17  Score=168.54  Aligned_cols=96  Identities=23%  Similarity=0.279  Sum_probs=82.6

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|.+|.++. ...+++++|+|.+++|+||++++.+++..                       .....+|||||+|.++
T Consensus       152 FLt~~~~~~~~-~al~~il~g~~~~~~r~~L~~~v~~~~~~-----------------------~~~~~~ALNev~i~~~  207 (388)
T 3afo_A          152 FLSPFDFKEHK-KVFQEVISSRAKCLHRTRLECHLKKKDSN-----------------------SSIVTHAMNDIFLHRG  207 (388)
T ss_dssp             SSCCEEGGGHH-HHHHHHHTTCCEEEEECCEEEEEECTTCC-----------------------CCEEEEESSEEEEECT
T ss_pred             cCCcCChHHHH-HHHHHHhcCCceEEEeeEEEEEEEeCCcc-----------------------chhhheeeceEEEecC
Confidence            47888877666 56678899999999999999999764431                       0124689999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEE
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTI  124 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~  124 (440)
                      ..+||++++++|||+ ++++++|||||||||||||||++|+
T Consensus       208 ~~~~~~~~~v~id~~-~~~~~~~DGliVsTPTGSTAYslSA  247 (388)
T 3afo_A          208 NSPHLTNLDIFIDGE-FLTRTTADGVALATPTGSTAYSLSA  247 (388)
T ss_dssp             TCSSCEEEEEEETTE-EEEEEEEEEEEEECTGGGGTHHHHT
T ss_pred             CCCcEEEEEEEECCE-EEEeecCCeEEEeCCCcHHHHHHhc
Confidence            999999999999997 9999999999999999999999875

>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*

Probab=99.62  E-value=6.3e-17  Score=159.24  Aligned_cols=89  Identities=21%  Similarity=0.334  Sum_probs=79.1

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|+|..|.++. ...+++++ +|.+++|+||++ +.+++                             .+|||||+|.++
T Consensus       104 FLt~~~~~~~~-~~l~~l~~-~~~i~~r~~L~~-v~~~~-----------------------------~~ALNEv~I~~~  151 (278)
T 1z0s_A          104 LLTHASPENFE-VELKKAVE-KFEVERFPRVSC-SAMPD-----------------------------VLALNEIAVLSR  151 (278)
T ss_dssp             TTCCBBTTBCH-HHHHHHHH-HCCEEEECCEEE-TTEEE-----------------------------EEESSEEEEEES
T ss_pred             cccccCHHHHH-HHHHHHHh-hCeEEEeEEEEE-EECCC-----------------------------cEEEEEEEEecC
Confidence            58898888887 66777888 999999999999 75321                             579999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEE
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTIS  125 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~  125 (440)
                      ..+||++++++|||+ ++++++|||||||||||||||++|+-
T Consensus       152 ~~~~~~~~~v~idg~-~~~~~~~DGlIVsTPTGSTAY~lSAG  192 (278)
T 1z0s_A          152 KPAKMIDVALRVDGV-EVDRIRCDGFIVATQIGSTGYAFSAG  192 (278)
T ss_dssp             STTCCEEEEEEETTE-EEEEEEESEEEEEESGGGGTHHHHTT
T ss_pred             CCccEEEEEEEECCE-EEEEEecCeEEEecCCchhHHHhhCC
Confidence            999999999999997 99999999999999999999999943

>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A

Probab=99.49  E-value=6.9e-15  Score=146.21  Aligned_cols=96  Identities=22%  Similarity=0.300  Sum_probs=82.0

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|++..|.++. ...++|++|+|++++|++|++++.+++.                        ......||||++|.++
T Consensus       112 fl~~~~~~~~~-~~~~~i~~g~~~~~~r~~l~~~v~~~g~------------------------~~~~~~ALNev~i~~~  166 (307)
T 1u0t_A          112 FLAEAEAEAID-AVLEHVVAQDYRVEDRLTLDVVVRQGGR------------------------IVNRGWALNEVSLEKG  166 (307)
T ss_dssp             SSCSEEGGGHH-HHHHHHHHTCCEEEEECCEEEEEEETTE------------------------EEEEEEESSEEEEECS
T ss_pred             cCcccCHHHHH-HHHHHHHcCCcEEEEEEEEEEEEEeCcc------------------------ceeceeeeeeEEEecC
Confidence            46676676665 5666889999999999999999976553                        2244689999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEE
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTIS  125 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~  125 (440)
                      ..+|+++++|++||+ +++++++|||||+||||||+|++|..
T Consensus       167 ~~~~~~~~~v~idg~-~~~~~~~dGlivsTptGSTaY~lSaG  207 (307)
T 1u0t_A          167 PRLGVLGVVVEIDGR-PVSAFGCDGVLVSTPTGSTAYAFSAG  207 (307)
T ss_dssp             SSSSCEEEEEESSSS-EEEEEEESEEEEECTGGGGTHHHHTT
T ss_pred             CCceEEEEEEEECCE-EEEEEcCCEEEEccchhhHHHHhcCC
Confidence            999999999999997 89999999999999999999988764

>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*

Probab=99.43  E-value=6.2e-14  Score=137.08  Aligned_cols=94  Identities=18%  Similarity=0.223  Sum_probs=78.4

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|++..|.++. ...++|++|+|+++.|++|++++.....                       +......||||++|.+.
T Consensus        74 fl~~~~~~~~~-~~l~~l~~g~~~i~~r~~L~~~v~~~~g-----------------------~~~~~~~ALNev~i~~~  129 (272)
T 2i2c_A           74 FYADWRPAEAD-KLVKLLAKGEYQKVSYPLLKTTVKYGIG-----------------------KKEATYLALNESTVKSS  129 (272)
T ss_dssp             SSCCBCGGGHH-HHHHHHHTTCCEEEEEEEEEEEEEESSS-----------------------CCEEEEEESSEEEEEES
T ss_pred             cCCcCCHHHHH-HHHHHHHcCCCEEEEEEEEEEEEEeCCC-----------------------cEEeHHhhhhHhhhccc
Confidence            46777787765 5667899999999999999999864211                       11125689999999984


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEE
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTI  124 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~  124 (440)
                        +|++.+++++||+ +++++++||||||||||||+|++|+
T Consensus       130 --~~~~~~~i~idg~-~~~~~~~DGlivsTptGSTaY~~Sa  167 (272)
T 2i2c_A          130 --GGPFVVDVVINDI-HFERFRGDGLCMSTPSGTTAYNKSL  167 (272)
T ss_dssp             --SSCEEEEEEETTE-EEEEEEESEEEEECTGGGGTHHHHT
T ss_pred             --CcEEEEEEEECCE-EEEEEECCEEEEEccccHHHHHHcC
Confidence              6999999999997 9999999999999999999998864

>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}

Probab=99.43  E-value=5.6e-14  Score=136.38  Aligned_cols=90  Identities=22%  Similarity=0.232  Sum_probs=79.5

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|++..|.++. ...+++++|+|++++|++|++++.+.                             ...||||++|.++
T Consensus        77 fl~~~~~~~~~-~al~~i~~g~~~i~~r~~l~~~~~~~-----------------------------~~~alNev~i~~~  126 (258)
T 1yt5_A           77 FLTSYTLDEID-RFLEDLRNWNFREETRWFIQIESELG-----------------------------NHLALNDVTLERD  126 (258)
T ss_dssp             SSCCBCGGGHH-HHHHHHHTTCCEEEEEEEEEEEETTE-----------------------------EEEESSEEEEECC
T ss_pred             ccCcCCHHHHH-HHHHHHHcCCceEEEEEEEEEEEcCC-----------------------------cceeeeEEEEecC
Confidence            46777787776 66678899999999999999988532                             2579999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEE
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTI  124 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~  124 (440)
                      ..+|+++++|++||+ .++++++||||||||||||+|++|+
T Consensus       127 ~~~~~~~~~v~idg~-~~~~~~~dGlivsTptGSTaY~~Sa  166 (258)
T 1yt5_A          127 LSGKMVEIEVEVEHH-SSMWFFADGVVISTPTGSTAYSLSI  166 (258)
T ss_dssp             TTSCCEEEEEEETTS-CCEEEEESEEEEECTGGGGTTTTTT
T ss_pred             CCCceEEEEEEECCE-EEEEEEccEEEEEcCCCcHHHHhhC
Confidence            889999999999997 8899999999999999999999886

>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}

Probab=99.42  E-value=8.9e-14  Score=136.58  Aligned_cols=95  Identities=19%  Similarity=0.202  Sum_probs=80.8

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|++..|.+.. .+.++|++|+|++.+|++|++.+.+.++                        ......||||++|.++
T Consensus       100 fla~~~~~~~~-~al~~i~~g~~~~~~r~~l~~~~~~~~~------------------------~~~~~~alnev~i~~~  154 (292)
T 2an1_A          100 FLTDLDPDNAL-QQLSDVLEGRYISEKRFLLEAQVCQQDR------------------------QKRISTAINEVVLHPG  154 (292)
T ss_dssp             SSCCBCTTSHH-HHHHHHHTTCEEEEEEEEEEEEEECC----------------------------CEEEESSEEEEEES
T ss_pred             cCCcCCHHHHH-HHHHHHHcCCCEEEEeEEEEEEEEeCCc------------------------eEeeeeEeeeEEEecC
Confidence            47777777665 5667889999999999999999865443                        1245689999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEE
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTI  124 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~  124 (440)
                      ..+|+++++|++||+ .++++++|||||+||||||+|++|+
T Consensus       155 ~~~~~~~~~v~idg~-~~~~~~~dglivstptGSTay~~Sa  194 (292)
T 2an1_A          155 KVAHMIEFEVYIDET-FAFSQRSDGLIISTPTGSTAYSLSA  194 (292)
T ss_dssp             STTCCEEEEEEETTE-EEEEEEESEEEEECTGGGGTHHHHT
T ss_pred             CCCceEEEEEEECCE-EEEEEEeCEEEECCCCchHHHHHhC
Confidence            889999999999997 8899999999999999999998886

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	440
d1u0ta_	302	Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob	99.55
d1z0sa1	249	Inorganic polyphosphate/ATP-NAD kinase PpnK {Archa	99.37

>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]}

class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: NAD kinase-like
domain: Inorganic polyphosphate/ATP-NAD kinase PpnK
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.55  E-value=4.6e-16  Score=152.50  Aligned_cols=96  Identities=22%  Similarity=0.300  Sum_probs=85.5

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|++..|.++. ...+++++|+|.+++|++|++.+...+.                        ......||||++|.++
T Consensus       108 FL~~~~~~~~~-~~l~~~~~g~~~~~~r~~l~~~~~~~~~------------------------~~~~~~alNdvvi~~~  162 (302)
T d1u0ta_         108 FLAEAEAEAID-AVLEHVVAQDYRVEDRLTLDVVVRQGGR------------------------IVNRGWALNEVSLEKG  162 (302)
T ss_dssp             SSCSEEGGGHH-HHHHHHHHTCCEEEEECCEEEEEEETTE------------------------EEEEEEESSEEEEECS
T ss_pred             eecccchhHHH-HHHHHHHhcCcceeeeeeeeeEeccCCc------------------------eeeehhhhhhhhcccC
Confidence            58888888777 6777899999999999999999976553                        2245789999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEEE
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTIS  125 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~~  125 (440)
                      ..++++.+.+++||+ ++++++|||||||||||||||++|+.
T Consensus       163 ~~~~~~~~~v~i~~~-~~~~~~~DGlivSTPtGSTAYslSaG  203 (302)
T d1u0ta_         163 PRLGVLGVVVEIDGR-PVSAFGCDGVLVSTPTGSTAYAFSAG  203 (302)
T ss_dssp             SSSSCEEEEEESSSS-EEEEEEESEEEEECTGGGGTHHHHTT
T ss_pred             cccceeeEEEEecce-eEEEeecceEEEehhhccCcchhhcc
Confidence            999999999999997 99999999999999999999998874

>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]}

class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: NAD kinase-like
domain: Inorganic polyphosphate/ATP-NAD kinase PpnK
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.37  E-value=6.5e-14  Score=133.54  Aligned_cols=88  Identities=23%  Similarity=0.353  Sum_probs=74.8

Q ss_pred             CCCCCCCCCccCChhhhccCCCeeeEEEeeEEEEEccCCccccCCCCCCCCCCCCCCCCCCCCccccccccceeeEeecc
Q psy1578           4 TLPENEPKDFHILPELALNDGKYKNLYRTRIKVSLRGNTTSHSLHSDNPPSRPRTLPENEPKDFHILPELALNDVYVGEY   83 (440)
Q Consensus         4 ~~~~~~p~~~~~~~~~~l~~G~f~~~~R~rir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alNev~i~~~   83 (440)
                      .|++..|+++. ...+++++ +|.+++|++++++.    .                          ...+|||||+|.++
T Consensus        75 FL~~~~~~~~~-~~l~~~~~-~~~~~~~~~~~~~~----~--------------------------~~~~AlNev~i~~~  122 (249)
T d1z0sa1          75 LLTHASPENFE-VELKKAVE-KFEVERFPRVSCSA----M--------------------------PDVLALNEIAVLSR  122 (249)
T ss_dssp             TTCCBBTTBCH-HHHHHHHH-HCCEEEECCEEETT----E--------------------------EEEEESSEEEEEES
T ss_pred             CccccCHHHHH-HHHHHhhh-hhhhhheehhheee----e--------------------------ecccccccceeeec
Confidence            57888888877 44555565 59999999987632    1                          24679999999999


Q ss_pred             CcccEEEEEEEECCccceeeEeecceEEEcccccceeEEEE
Q psy1578          84 NSALVSKLIISCDSHVPAKQIKCSGMCINTGSGSTAWYYTI  124 (440)
Q Consensus        84 ~~~~~~~~~~~id~~~~~~~~~~dGliv~t~tgst~~~~s~  124 (440)
                      ..++++.+++++||+ .+++++|||||||||||||||++|+
T Consensus       123 ~~~~~~~~~i~i~~~-~~~~~~gDGliisTptGSTAY~lSa  162 (249)
T d1z0sa1         123 KPAKMIDVALRVDGV-EVDRIRCDGFIVATQIGSTGYAFSA  162 (249)
T ss_dssp             STTCCEEEEEEETTE-EEEEEEESEEEEEESGGGGTHHHHT
T ss_pred             Ccchhhhhhhhcccc-cceEEeeceEEEeccccCHHHHHhc
Confidence            999999999999997 8999999999999999999999976