Psyllid ID: psy16136

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330--
RVVPPLIALLLIIKKDLPTSVFTILLIINYLIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLLDIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGRSILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDITAKEWAFKSLTHPLGLFAPTPKLRIVLFVYGVKLLELRAFGKM
ccccHHHHHHHHHHHccccccHHHHHcccHHcHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHccccccccccccccccccccccccEEEEccccccccHHccccccccHHHHHHccccEEEEEccEEEEcccccccccccHHHHcccccccccccccccHHHHHHHHHHHHHHHHcccc
cccHHHHHHHccccccccccccccccccccccccHHHHHHcEEEccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccEEEEccccEEEEEEcccccccccEcccccEEEEEEcEEEccEEccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHccccccccccccccccccccccccEEEEEccccEEcccccHHHccccHHccHHccccEEEEEccEEEEccccEEcccccccHHHHHHHHcccccccHHEEEEEEHHHHHHHHHHHccc
RVVPPLIALLLIIkkdlptsvFTILLIINYLIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCIcasggngavlhyghasapndkrvndgdmlvfdmgssycgyasditcsypvngkfteKQAYIYNAVLSANRAVMEaakpgvswvDMHHLANKVVLSKLLDIGLLRGTIDELMEESYFHwafgvyepdfygviemttgrsilfaprlsEDYVVWmgqlptldeykekyqvdevyfsdeVMYSRAYLHDITAKEWAFkslthplglfaptpkLRIVLFVYGVKLLELRAFGKM
RVVPPLIALLLIikkdlptsvFTILLIINYLIIYHGIIRYSRVIKTELELDVMRyasrisseahrsVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLLDIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGRSILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDITAKEWAFKSLTHPLGLFAPTPKLRIVLFVYGVKLLELRAFGKM
RVVppliallliikkdlpTSVFTilliinyliiyhgiiRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLLDIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGRSILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDITAKEWAFKSLTHPLGLFAPTPKLRIVLFVYGVKLLELRAFGKM
***PPLIALLLIIKKDLPTSVFTILLIINYLIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLLDIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGRSILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDITAKEWAFKSLTHPLGLFAPTPKLRIVLFVYGVKLLELRAF***
*VVPPLIALLLIIKKD*********LIINYLIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLLDIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGRSILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDITAKEWAFKSLTHPLGLFAPTPKLRIVLFVYGVKLLELRAFG**
RVVPPLIALLLIIKKDLPTSVFTILLIINYLIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLLDIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGRSILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDITAKEWAFKSLTHPLGLFAPTPKLRIVLFVYGVKLLELRAFGKM
RVVPPLIALLLIIKKDLPTSVFTILLIINYLIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLLDIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGRSILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDITAKEWAFKSLTHPLGLFAPTPKLRIVLFVYGVKLLELRAFG**
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiii
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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RVVPPLIALLLIIKKDLPTSVFTILLIINYLIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLLDIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGRSILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDITAKEWAFKSLTHPLGLFAPTPKLRIVLFVYGVKLLELRAFGKM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query332 2.2.26 [Sep-21-2011]
Q11136493 Xaa-Pro dipeptidase OS=Mu yes N/A 0.560 0.377 0.556 8e-59
Q5I0D7492 Xaa-Pro dipeptidase OS=Ra yes N/A 0.566 0.382 0.544 2e-58
P12955493 Xaa-Pro dipeptidase OS=Ho no N/A 0.560 0.377 0.540 3e-57
Q5RFB3493 Xaa-Pro dipeptidase OS=Po yes N/A 0.560 0.377 0.534 3e-56
Q55E60501 Xaa-Pro dipeptidase OS=Di yes N/A 0.527 0.349 0.5 5e-47
D1ZQL9467 Probable Xaa-Pro aminopep N/A N/A 0.551 0.391 0.395 9e-30
A7UWH7468 Probable Xaa-Pro aminopep N/A N/A 0.551 0.391 0.395 3e-29
P15034441 Xaa-Pro aminopeptidase OS N/A N/A 0.737 0.555 0.300 6e-29
D5GHP2455 Probable Xaa-Pro aminopep N/A N/A 0.515 0.375 0.372 1e-27
B2WMQ2463 Probable Xaa-Pro aminopep N/A N/A 0.551 0.395 0.364 2e-27
>sp|Q11136|PEPD_MOUSE Xaa-Pro dipeptidase OS=Mus musculus GN=Pepd PE=2 SV=3 Back     alignment and function desciption
 Score =  227 bits (579), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 104/187 (55%), Positives = 135/187 (72%), Gaps = 1/187 (0%)

Query: 28  INYLIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHY 87
           +N  I++  I+   RV KT++EL+V+RY +RISSEAHR VM+ V  GM EY+ E++F+HY
Sbjct: 171 VNNTILHPEIVE-CRVFKTDMELEVLRYTNRISSEAHREVMKAVKVGMKEYEMESLFQHY 229

Query: 88  ILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDIT 147
               GG RH +YTCIC SG N AVLHYGHA APND+ + DGD+ +FDMG  Y  +ASDIT
Sbjct: 230 CYSRGGMRHTSYTCICCSGENAAVLHYGHAGAPNDRTIKDGDICLFDMGGEYYCFASDIT 289

Query: 148 CSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLLDIGLLRG 207
           CS+P NGKFTE Q  IY AVL + R VM   KPGV W DMH LA+++ L +L  IGLL G
Sbjct: 290 CSFPANGKFTEDQKAIYEAVLRSCRTVMSTMKPGVWWPDMHRLADRIHLEELARIGLLSG 349

Query: 208 TIDELME 214
           ++D +++
Sbjct: 350 SVDAMLQ 356
Splits dipeptides with a prolyl or hydroxyprolyl residue in the C-terminal position. Plays an important role in collagen metabolism because of the high level of iminoacids in collagen.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 4EC: .EC: 1EC: 3EC: .EC: 9
>sp|Q5I0D7|PEPD_RAT Xaa-Pro dipeptidase OS=Rattus norvegicus GN=Pepd PE=2 SV=1 Back     alignment and function description
>sp|P12955|PEPD_HUMAN Xaa-Pro dipeptidase OS=Homo sapiens GN=PEPD PE=1 SV=3 Back     alignment and function description
>sp|Q5RFB3|PEPD_PONAB Xaa-Pro dipeptidase OS=Pongo abelii GN=PEPD PE=2 SV=1 Back     alignment and function description
>sp|Q55E60|PEPD_DICDI Xaa-Pro dipeptidase OS=Dictyostelium discoideum GN=pepd PE=1 SV=1 Back     alignment and function description
>sp|D1ZQL9|AMPP2_SORMK Probable Xaa-Pro aminopeptidase SMAC_04549 OS=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) GN=SMAC_04549 PE=3 SV=1 Back     alignment and function description
>sp|A7UWH7|AMPP2_NEUCR Probable Xaa-Pro aminopeptidase NCU11288 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU11288 PE=3 SV=1 Back     alignment and function description
>sp|P15034|AMPP_ECOLI Xaa-Pro aminopeptidase OS=Escherichia coli (strain K12) GN=pepP PE=1 SV=2 Back     alignment and function description
>sp|D5GHP2|AMPP2_TUBMM Probable Xaa-Pro aminopeptidase GSTUM_00008071001 OS=Tuber melanosporum (strain Mel28) GN=GSTUM_00008071001 PE=3 SV=1 Back     alignment and function description
>sp|B2WMQ2|AMPP3_PYRTR Probable Xaa-Pro aminopeptidase pepP OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=pepP PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query332
443721976 491 hypothetical protein CAPTEDRAFT_164622 [ 0.548 0.370 0.620 7e-64
242013205 446 Xaa-Pro dipeptidase, putative [Pediculus 0.536 0.399 0.629 3e-62
198419425 499 PREDICTED: similar to peptidase D [Ciona 0.548 0.364 0.615 5e-62
193617853 486 PREDICTED: xaa-Pro dipeptidase-like [Acy 0.506 0.345 0.626 8e-62
3114966 501 prolidase [Suberites domuncula] 0.563 0.373 0.606 1e-61
3114968 465 prolidase [Suberites domuncula] 0.563 0.402 0.606 2e-61
321477623 474 hypothetical protein DAPPUDRAFT_126867 [ 0.548 0.383 0.598 1e-60
268535524 497 Hypothetical protein CBG15103 [Caenorhab 0.521 0.348 0.641 4e-60
427783737 485 Putative xaa-pro dipeptidase [Rhipicepha 0.536 0.367 0.601 5e-60
345492726 559 PREDICTED: xaa-Pro dipeptidase-like isof 0.560 0.332 0.582 1e-59
>gi|443721976|gb|ELU11049.1| hypothetical protein CAPTEDRAFT_164622 [Capitella teleta] Back     alignment and taxonomy information
 Score =  250 bits (638), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 113/182 (62%), Positives = 140/182 (76%)

Query: 33  IYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVG 92
           I H II   RV KT++ELDV+R+A+RISSEAH  VMRK+  GMYEYQ E+IF+ Y    G
Sbjct: 176 ILHPIIAELRVFKTDMELDVLRFANRISSEAHMEVMRKIKPGMYEYQGESIFQQYCYSNG 235

Query: 93  GSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPV 152
           G RH+ YTCIC +G NG++LHYGHA+APNDKR+ DGDM +FDMG  Y  Y SDITCS+P 
Sbjct: 236 GMRHMGYTCICGTGHNGSILHYGHAAAPNDKRIQDGDMCLFDMGGEYYCYTSDITCSFPA 295

Query: 153 NGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLLDIGLLRGTIDEL 212
           NGKFT  Q  IYNAVL +NRAVM+A KPGVSW DMH L+ +V+L +L + GLL+G +D +
Sbjct: 296 NGKFTPDQVTIYNAVLRSNRAVMKAIKPGVSWPDMHRLSERVLLEELKEAGLLKGDVDAM 355

Query: 213 ME 214
           M+
Sbjct: 356 MK 357

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota
>gi|242013205|ref|XP_002427305.1| Xaa-Pro dipeptidase, putative [Pediculus humanus corporis] gi|212511646|gb|EEB14567.1| Xaa-Pro dipeptidase, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|198419425|ref|XP_002130029.1| PREDICTED: similar to peptidase D [Ciona intestinalis] Back     alignment and taxonomy information
>gi|193617853|ref|XP_001948976.1| PREDICTED: xaa-Pro dipeptidase-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|3114966|emb|CAA75230.1| prolidase [Suberites domuncula] Back     alignment and taxonomy information
>gi|3114968|emb|CAA75231.1| prolidase [Suberites domuncula] Back     alignment and taxonomy information
>gi|321477623|gb|EFX88581.1| hypothetical protein DAPPUDRAFT_126867 [Daphnia pulex] Back     alignment and taxonomy information
>gi|268535524|ref|XP_002632895.1| Hypothetical protein CBG15103 [Caenorhabditis briggsae] gi|268564228|ref|XP_002639050.1| Hypothetical protein CBG22302 [Caenorhabditis briggsae] Back     alignment and taxonomy information
>gi|427783737|gb|JAA57320.1| Putative xaa-pro dipeptidase [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|345492726|ref|XP_003426915.1| PREDICTED: xaa-Pro dipeptidase-like isoform 3 [Nasonia vitripennis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query332
WB|WBGene00019673498 K12C11.1 [Caenorhabditis elega 0.521 0.347 0.624 2e-56
ZFIN|ZDB-GENE-030131-9444496 pepd "peptidase D" [Danio reri 0.521 0.348 0.583 4.2e-56
UNIPROTKB|F1NIQ9497 PEPD "Uncharacterized protein" 0.521 0.348 0.583 1.1e-55
UNIPROTKB|F6Q234493 PEPD "Uncharacterized protein" 0.521 0.350 0.601 1.3e-54
FB|FBgn0000455491 Dip-C "Dipeptidase C" [Drosoph 0.560 0.378 0.526 1.6e-54
UNIPROTKB|F1PNS6386 PEPD "Uncharacterized protein" 0.521 0.448 0.595 2.6e-54
MGI|MGI:97542493 Pepd "peptidase D" [Mus muscul 0.521 0.350 0.583 5.5e-54
RGD|1594571492 Pepd "peptidase D" [Rattus nor 0.521 0.351 0.578 8.9e-54
UNIPROTKB|Q5I0D7492 Pepd "Xaa-Pro dipeptidase" [Ra 0.521 0.351 0.578 8.9e-54
UNIPROTKB|P12955493 PEPD "Xaa-Pro dipeptidase" [Ho 0.521 0.350 0.566 3.8e-53
WB|WBGene00019673 K12C11.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
 Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
 Identities = 108/173 (62%), Positives = 135/173 (78%)

Query:    42 RVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTC 101
             RV+KTE E+ VMRYAS+I+SEAHR+ M+ +  G+YEYQ E++F+H   Y GG RH+AYTC
Sbjct:   181 RVVKTEKEIGVMRYASKIASEAHRAAMKHMRPGLYEYQLESLFRHTSYYHGGCRHLAYTC 240

Query:   102 ICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQA 161
             I A+G NG+VLHYGHA+APNDK + DGDM +FDMG  Y  YASDIT S+P NGKFTEKQ 
Sbjct:   241 IAATGCNGSVLHYGHANAPNDKFIKDGDMCLFDMGPEYNCYASDITTSFPSNGKFTEKQK 300

Query:   162 YIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLLDIGLLRGTIDELME 214
              +YNAVL+AN AV++AAKPGV W DMH L+ KV+L  L   GL+ G ID+ +E
Sbjct:   301 IVYNAVLAANLAVLKAAKPGVRWTDMHILSEKVILEHLKQAGLIVGDIDKAVE 353
GO:0009987 "cellular process" evidence=IEA
GO:0004177 "aminopeptidase activity" evidence=IEA
GO:0030145 "manganese ion binding" evidence=IEA
GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP
GO:0040007 "growth" evidence=IMP
GO:0002119 "nematode larval development" evidence=IMP
GO:0040011 "locomotion" evidence=IMP
ZFIN|ZDB-GENE-030131-9444 pepd "peptidase D" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NIQ9 PEPD "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F6Q234 PEPD "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
FB|FBgn0000455 Dip-C "Dipeptidase C" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1PNS6 PEPD "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:97542 Pepd "peptidase D" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1594571 Pepd "peptidase D" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q5I0D7 Pepd "Xaa-Pro dipeptidase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P12955 PEPD "Xaa-Pro dipeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5I0D7PEPD_RAT3, ., 4, ., 1, 3, ., 90.54490.56620.3821yesN/A
Q11136PEPD_MOUSE3, ., 4, ., 1, 3, ., 90.55610.56020.3772yesN/A
Q5RFB3PEPD_PONAB3, ., 4, ., 1, 3, ., 90.53470.56020.3772yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query332
cd01087243 cd01087, Prolidase, Prolidase 5e-67
COG0006384 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid 4e-42
pfam00557208 pfam00557, Peptidase_M24, Metallopeptidase family 7e-42
PRK10879438 PRK10879, PRK10879, proline aminopeptidase P II; P 1e-39
cd01092208 cd01092, APP-like, Similar to Prolidase and Aminop 2e-26
cd01066207 cd01066, APP_MetAP, A family including aminopeptid 7e-23
PRK13607443 PRK13607, PRK13607, proline dipeptidase; Provision 3e-18
pfam05195134 pfam05195, AMP_N, Aminopeptidase P, N-terminal dom 2e-16
PRK09795361 PRK09795, PRK09795, aminopeptidase; Provisional 4e-16
smart01011135 smart01011, AMP_N, Aminopeptidase P, N-terminal do 3e-15
COG0024255 COG0024, Map, Methionine aminopeptidase [Translati 2e-09
cd01085224 cd01085, APP, X-Prolyl Aminopeptidase 2 2e-07
PRK12896255 PRK12896, PRK12896, methionine aminopeptidase; Rev 4e-07
TIGR02993391 TIGR02993, ectoine_eutD, ectoine utilization prote 5e-05
PRK05716252 PRK05716, PRK05716, methionine aminopeptidase; Val 9e-05
TIGR00500247 TIGR00500, met_pdase_I, methionine aminopeptidase, 9e-05
PRK14576405 PRK14576, PRK14576, putative endopeptidase; Provis 7e-04
PRK15173323 PRK15173, PRK15173, peptidase; Provisional 8e-04
PRK14575406 PRK14575, PRK14575, putative peptidase; Provisiona 0.001
cd01086238 cd01086, MetAP1, Methionine Aminopeptidase 1 0.002
PRK12897248 PRK12897, PRK12897, methionine aminopeptidase; Rev 0.004
>gnl|CDD|238520 cd01087, Prolidase, Prolidase Back     alignment and domain information 
 Score =  210 bits (536), Expect = 5e-67
 Identities = 73/166 (43%), Positives = 110/166 (66%), Gaps = 6/166 (3%)

Query: 50  LDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNG 109
           +++MR A  IS+EAHR+ M+    GM EY+ EA F++     G     +Y     S  N 
Sbjct: 1   IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARLAYSYIVAAGS--NA 58

Query: 110 AVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLS 169
           A+LHY H    ND+ + DGD+++ D G+ Y GYASDIT ++PVNGKFT++Q  +Y AVL+
Sbjct: 59  AILHYVH----NDQPLKDGDLVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLA 114

Query: 170 ANRAVMEAAKPGVSWVDMHHLANKVVLSKLLDIGLLRGTIDELMEE 215
           A +A + A KPGVS+ D+H LA++V+   L ++G+L+G +DE++E 
Sbjct: 115 AQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVES 160

E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro. Length = 243
>gnl|CDD|223085 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|215993 pfam00557, Peptidase_M24, Metallopeptidase family M24 Back     alignment and domain information
>gnl|CDD|182804 PRK10879, PRK10879, proline aminopeptidase P II; Provisional Back     alignment and domain information
>gnl|CDD|238525 cd01092, APP-like, Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>gnl|CDD|238514 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>gnl|CDD|237444 PRK13607, PRK13607, proline dipeptidase; Provisional Back     alignment and domain information
>gnl|CDD|218491 pfam05195, AMP_N, Aminopeptidase P, N-terminal domain Back     alignment and domain information
>gnl|CDD|182080 PRK09795, PRK09795, aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|198079 smart01011, AMP_N, Aminopeptidase P, N-terminal domain Back     alignment and domain information
>gnl|CDD|223103 COG0024, Map, Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|238518 cd01085, APP, X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>gnl|CDD|237252 PRK12896, PRK12896, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|211774 TIGR02993, ectoine_eutD, ectoine utilization protein EutD Back     alignment and domain information
>gnl|CDD|235576 PRK05716, PRK05716, methionine aminopeptidase; Validated Back     alignment and domain information
>gnl|CDD|129591 TIGR00500, met_pdase_I, methionine aminopeptidase, type I Back     alignment and domain information
>gnl|CDD|173040 PRK14576, PRK14576, putative endopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|185095 PRK15173, PRK15173, peptidase; Provisional Back     alignment and domain information
>gnl|CDD|173039 PRK14575, PRK14575, putative peptidase; Provisional Back     alignment and domain information
>gnl|CDD|238519 cd01086, MetAP1, Methionine Aminopeptidase 1 Back     alignment and domain information
>gnl|CDD|171806 PRK12897, PRK12897, methionine aminopeptidase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 332
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 100.0
PRK10879438 proline aminopeptidase P II; Provisional 100.0
KOG2414|consensus488 100.0
PRK15173323 peptidase; Provisional 100.0
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 100.0
PRK09795361 aminopeptidase; Provisional 100.0
KOG2737|consensus492 100.0
PRK14575406 putative peptidase; Provisional 100.0
PRK14576405 putative endopeptidase; Provisional 100.0
PRK13607443 proline dipeptidase; Provisional 100.0
PLN03158396 methionine aminopeptidase; Provisional 100.0
PRK12897248 methionine aminopeptidase; Reviewed 100.0
PRK12318291 methionine aminopeptidase; Provisional 100.0
PRK07281286 methionine aminopeptidase; Reviewed 100.0
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 100.0
KOG2738|consensus369 100.0
PRK12896255 methionine aminopeptidase; Reviewed 100.0
PRK05716252 methionine aminopeptidase; Validated 100.0
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 100.0
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 100.0
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 100.0
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 100.0
COG0024255 Map Methionine aminopeptidase [Translation, riboso 100.0
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 99.98
cd01091243 CDC68-like Related to aminopeptidase P and aminope 99.97
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 99.97
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 99.97
cd01066207 APP_MetAP A family including aminopeptidase P, ami 99.97
TIGR00495389 crvDNA_42K 42K curved DNA binding protein. Protein 99.95
PTZ00053470 methionine aminopeptidase 2; Provisional 99.95
TIGR00501295 met_pdase_II methionine aminopeptidase, type II. M 99.95
cd01088291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 99.94
PRK08671291 methionine aminopeptidase; Provisional 99.94
KOG2413|consensus606 99.83
KOG1189|consensus 960 99.77
COG5406 1001 Nucleosome binding factor SPN, SPT16 subunit [Tran 99.52
KOG2775|consensus397 99.5
KOG2776|consensus398 99.37
PF05195134 AMP_N: Aminopeptidase P, N-terminal domain; InterP 99.26
KOG2737|consensus 492 99.1
PRK10879 438 proline aminopeptidase P II; Provisional 98.42
cd01066207 APP_MetAP A family including aminopeptidase P, ami 95.27
PRK13607 443 proline dipeptidase; Provisional 95.24
KOG2738|consensus369 94.48
KOG2414|consensus 488 93.5
PLN03158396 methionine aminopeptidase; Provisional 93.3
PRK05716252 methionine aminopeptidase; Validated 93.29
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 92.97
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 92.89
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 92.88
PRK08671291 methionine aminopeptidase; Provisional 92.86
COG0024255 Map Methionine aminopeptidase [Translation, riboso 92.45
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 91.87
cd01088 291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 91.63
cd01091243 CDC68-like Related to aminopeptidase P and aminope 91.28
PRK12896255 methionine aminopeptidase; Reviewed 90.92
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 90.61
PRK12897248 methionine aminopeptidase; Reviewed 90.33
PRK12318291 methionine aminopeptidase; Provisional 90.32
TIGR00501295 met_pdase_II methionine aminopeptidase, type II. M 89.08
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 89.07
PRK15173323 peptidase; Provisional 88.08
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 87.84
KOG2775|consensus 397 87.57
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 87.51
PRK09795361 aminopeptidase; Provisional 87.37
PRK14575406 putative peptidase; Provisional 87.21
PRK07281286 methionine aminopeptidase; Reviewed 86.18
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 85.79
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 85.67
PRK14576405 putative endopeptidase; Provisional 84.4
TIGR00495389 crvDNA_42K 42K curved DNA binding protein. Protein 84.06
PTZ00053470 methionine aminopeptidase 2; Provisional 83.26
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.9e-43  Score=341.65  Aligned_cols=240  Identities=27%  Similarity=0.394  Sum_probs=207.6

Q ss_pred             HHHHHHHhhCCCCchhhhhhhhhccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHH
Q psy16136          8 ALLLIIKKDLPTSVFTILLIINYLIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHY   87 (332)
Q Consensus         8 ~~~~~l~~~~p~~~~~~~~~~~~~~d~~~~i~~lR~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~   87 (332)
                      .-+..|++.+|+++|+         |+++.+.++|++||+.||+.||+|+++++.++.+++++++||+||.|+++.++..
T Consensus       127 ~~~~~l~~~~~~~~~~---------~~~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~  197 (384)
T COG0006         127 AAFERLQAALPRAELV---------DASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYA  197 (384)
T ss_pred             HHHHHHHhhCCCCEEe---------ccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHH
Confidence            4467888889988888         8999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCcceeeeCCCCCcccCCCCCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHH
Q psy16136         88 ILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAV  167 (332)
Q Consensus        88 ~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~  167 (332)
                      +.+. |.+..+|.+||++|+|++.|||.    |+++.+++||+|++|+|+.|+|||||+||||++ |+|+++|+++|+.+
T Consensus       198 ~~~~-G~~~~sf~~iv~~G~n~a~pH~~----~~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~-G~~~~~~~~iy~~V  271 (384)
T COG0006         198 LRKG-GAEGPSFDTIVASGENAALPHYT----PSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPI-GKPSDEQREIYEAV  271 (384)
T ss_pred             HHHc-CCCccCcCcEEeccccccCcCCC----CCcccccCCCEEEEEeeeEECCccccceeEEec-CCCCHHHHHHHHHH
Confidence            9875 66767899999999999999975    499999999999999999999999999999999 89999999999999


Q ss_pred             HHHHHHHHHHcCCCCchhhhhHHHHHHHHhhcc--------cCCcccCccccccccceeEeeeccccCCceeeEeccCCc
Q psy16136        168 LSANRAVMEAAKPGVSWVDMHHLANKVVLSKLL--------DIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGR  239 (332)
Q Consensus       168 ~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g~--------ghGi~~~~~~~~~~~~~f~~~pGi~~pg~~g~~~~~~g~  239 (332)
                      +++|+++++++|||++++||+.++++++.++|+        |||+...  -      -.|=.|....++.  ...+++||
T Consensus       272 ~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~h~~GHgvG~~--l------~vhE~p~~~~~~~--~~~L~~GM  341 (384)
T COG0006         272 LEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFLHGTGHGVGFV--L------DVHEHPQYLSPGS--DTTLEPGM  341 (384)
T ss_pred             HHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCcccccCCccccCCCC--c------ccCcCccccCCCC--CccccCCc
Confidence            999999999999999999999999999999764        4444300  0      0111111111222  23478999


Q ss_pred             EEEEecCCCcccccccCCCCChhHHHHHcCCceEEEcCcccchhhhhhhhh
Q psy16136        240 SILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDIT  290 (332)
Q Consensus       240 ~ilf~P~~~~~~~iW~G~~p~~e~~~~~~~~~~v~~~~~i~it~~~~~~l~  290 (332)
                      ++++||++   |               ..+.-+|++||++.||+++.+.||
T Consensus       342 v~t~Epg~---y---------------~~g~~GirIEd~vlVte~G~e~LT  374 (384)
T COG0006         342 VFSIEPGI---Y---------------IPGGGGVRIEDTVLVTEDGFEVLT  374 (384)
T ss_pred             EEEecccc---c---------------cCCCceEEEEEEEEEcCCCceecc
Confidence            99999995   3               356778999999999999999998

>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>KOG2414|consensus Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>KOG2737|consensus Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>KOG2738|consensus Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>KOG2413|consensus Back     alignment and domain information
>KOG1189|consensus Back     alignment and domain information
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] Back     alignment and domain information
>KOG2775|consensus Back     alignment and domain information
>KOG2776|consensus Back     alignment and domain information
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2737|consensus Back     alignment and domain information
>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>KOG2738|consensus Back     alignment and domain information
>KOG2414|consensus Back     alignment and domain information
>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>KOG2775|consensus Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query332
2iw2_A494 Crystal Structure Of Human Prolidase Length = 494 1e-57
2iw2_A 494 Crystal Structure Of Human Prolidase Length = 494 2e-17
2v3z_A440 Glu383ala Escherichia Coli Aminopeptidase P In Comp 1e-30
2bwy_A440 Glu383ala Escherichia Coli Aminopeptidase P Length 3e-30
1wl9_A440 Structure Of Aminopeptidase P From E. Coli Length = 5e-30
2bwv_A440 His361ala Escherichia Coli Aminopeptidase P Length 5e-30
2bww_A440 His350ala Escherichia Coli Aminopeptidase P Length 9e-30
1m35_A440 Aminopeptidase P From Escherichia Coli Length = 440 1e-29
1jaw_A440 Aminopeptidase P From E. Coli Low Ph Form Length = 1e-29
2bws_A440 His243ala Escherichia Coli Aminopeptidase P Length 7e-29
2bwt_A440 Asp260ala Escherichia Coli Aminopeptidase P Length 1e-28
2bwu_A440 Asp271ala Escherichia Coli Aminopeptidase P Length 1e-28
2bwx_A441 His354ala Escherichia Coli Aminopeptidase P Length 2e-28
3ig4_A427 Structure Of A Putative Aminopeptidase P From Bacil 2e-22
1pv9_A348 Prolidase From Pyrococcus Furiosus Length = 348 5e-19
1wy2_A351 Crystal Structure Of The Prolidase From Pyrococcus 1e-18
3rva_A451 Crystal Structure Of Organophosphorus Acid Anhydrol 6e-15
2zsg_A359 Crystal Structure Of X-Pro Aminopeptidase From Ther 2e-13
1wn1_A356 Crystal Structure Of Dipeptiase From Pyrococcus Hor 3e-13
4ege_A378 Crystal Structure Of Dipeptidase Pepe From Mycobact 1e-10
3l24_A517 Crystal Structure Of The Nerve Agent Degrading Orga 3e-10
3q6d_A356 Xaa-Pro Dipeptidase From Bacillus Anthracis. Length 7e-10
4fkc_A377 Recombinant Prolidase From Thermococcus Sibiricus L 2e-08
>pdb|2IW2|A Chain A, Crystal Structure Of Human Prolidase Length = 494 Back     alignment and structure 
Iteration: 1

 Score =  219 bits (559), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 98/173 (56%), Positives = 130/173 (75%)
Query: 42  RVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTC 101
           RV KT++EL+V+RY ++ISSEAHR VM+ V  GM EY+ E++F+HY    GG RH +YTC
Sbjct: 185 RVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRHSSYTC 244
Query: 102 ICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQA 161
           IC SG N AVLHYGHA APND+ + +GDM +FDMG  Y  +ASDITCS+P NGKFT  Q 
Sbjct: 245 ICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQK 304
Query: 162 YIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLLDIGLLRGTIDELME 214
            +Y AVL ++RAVM A KPGV W DMH LA+++ L +L  +G+L G++D +++
Sbjct: 305 AVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQ 357
>pdb|2IW2|A Chain A, Crystal Structure Of Human Prolidase Length = 494 Back     alignment and structure
>pdb|2V3Z|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P In Complex With Substrate Length = 440 Back     alignment and structure
>pdb|2BWY|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|1WL9|A Chain A, Structure Of Aminopeptidase P From E. Coli Length = 440 Back     alignment and structure
>pdb|2BWV|A Chain A, His361ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWW|A Chain A, His350ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|1M35|A Chain A, Aminopeptidase P From Escherichia Coli Length = 440 Back     alignment and structure
>pdb|1JAW|A Chain A, Aminopeptidase P From E. Coli Low Ph Form Length = 440 Back     alignment and structure
>pdb|2BWS|A Chain A, His243ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWT|A Chain A, Asp260ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWU|A Chain A, Asp271ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|3IG4|A Chain A, Structure Of A Putative Aminopeptidase P From Bacillus Anthracis Length = 427 Back     alignment and structure
>pdb|1PV9|A Chain A, Prolidase From Pyrococcus Furiosus Length = 348 Back     alignment and structure
>pdb|1WY2|A Chain A, Crystal Structure Of The Prolidase From Pyrococcus Horikoshii Ot3 Length = 351 Back     alignment and structure
>pdb|3RVA|A Chain A, Crystal Structure Of Organophosphorus Acid Anhydrolase From Alteromonas Macleodii Length = 451 Back     alignment and structure
>pdb|2ZSG|A Chain A, Crystal Structure Of X-Pro Aminopeptidase From Thermotoga Maritima Msb8 Length = 359 Back     alignment and structure
>pdb|1WN1|A Chain A, Crystal Structure Of Dipeptiase From Pyrococcus Horikoshii Ot3 Length = 356 Back     alignment and structure
>pdb|4EGE|A Chain A, Crystal Structure Of Dipeptidase Pepe From Mycobacterium Ulcerans Length = 378 Back     alignment and structure
>pdb|3L24|A Chain A, Crystal Structure Of The Nerve Agent Degrading Organophosphate AnhydrolasePROLIDASE IN COMPLEX WITH Inhibitors Length = 517 Back     alignment and structure
>pdb|3Q6D|A Chain A, Xaa-Pro Dipeptidase From Bacillus Anthracis. Length = 356 Back     alignment and structure
>pdb|4FKC|A Chain A, Recombinant Prolidase From Thermococcus Sibiricus Length = 377 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query332
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 3e-87
2iw2_A 494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 3e-18
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 1e-80
3rva_A 451 Organophosphorus acid anhydrolase; PITA-bread fold 6e-12
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 6e-80
2v3z_A 440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 1e-13
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 3e-79
3ig4_A 427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 5e-15
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 4e-77
3l24_A 517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 1e-10
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 1e-33
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 1e-33
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 3e-33
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 2e-32
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 2e-31
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 3e-31
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 3e-30
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 4e-30
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 8e-29
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 2e-19
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 4e-11
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 4e-10
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 9e-10
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 5e-08
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 1e-07
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 1e-06
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 1e-06
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 2e-06
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 5e-06
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Length = 494 Back     alignment and structure
 Score =  269 bits (690), Expect = 3e-87
 Identities = 100/181 (55%), Positives = 132/181 (72%)

Query: 35  HGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGS 94
           H  I   RV KT++EL+V+RY ++ISSEAHR VM+ V  GM EY+ E++F+HY    GG 
Sbjct: 178 HPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGM 237

Query: 95  RHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNG 154
           RH +YTCIC SG N AVLHYGHA APND+ + +GDM +FDMG  Y  +ASDITCS+P NG
Sbjct: 238 RHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANG 297

Query: 155 KFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLLDIGLLRGTIDELME 214
           KFT  Q  +Y AVL ++RAVM A KPGV W DMH LA+++ L +L  +G+L G++D +++
Sbjct: 298 KFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQ 357

Query: 215 E 215
            
Sbjct: 358 A 358
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Length = 494 Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Length = 451 Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Length = 451 Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Length = 440 Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Length = 440 Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Length = 427 Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Length = 427 Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Length = 517 Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Length = 517 Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Length = 351 Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Length = 359 Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Length = 356 Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Length = 356 Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Length = 378 Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Length = 444 Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Length = 401 Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Length = 402 Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Length = 467 Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Length = 470 Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478 Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Length = 401 Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Length = 286 Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295 Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Length = 262 Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Length = 623 Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Length = 264 Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Length = 252 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query332
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 100.0
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 100.0
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 100.0
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 100.0
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 100.0
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 100.0
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 100.0
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 100.0
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 100.0
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 100.0
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 100.0
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 100.0
3mx6_A262 Methionine aminopeptidase; seattle structural geno 100.0
4fuk_A337 Methionine aminopeptidase; structural genomics con 100.0
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 100.0
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 100.0
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 100.0
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 100.0
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 100.0
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 100.0
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 100.0
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 100.0
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 100.0
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 100.0
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 100.0
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 100.0
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 100.0
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 100.0
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 100.0
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 99.98
3fm3_A358 Methionine aminopeptidase 2; metap2, structural ge 99.97
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 99.97
4b6a_t 614 Probable metalloprotease ARX1; large ribosomal sub 99.49
3ig4_A 427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 97.78
2iw2_A 494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 96.67
3l24_A 517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 93.94
2v3z_A 440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 93.91
3rva_A 451 Organophosphorus acid anhydrolase; PITA-bread fold 93.54
3fm3_A 358 Methionine aminopeptidase 2; metap2, structural ge 93.06
3mx6_A262 Methionine aminopeptidase; seattle structural geno 91.55
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 89.84
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 89.1
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 88.72
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 88.63
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 87.72
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 87.46
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 87.34
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 86.5
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 86.3
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 86.3
4fuk_A337 Methionine aminopeptidase; structural genomics con 85.82
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 85.67
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 85.6
1xgs_A 295 Methionine aminopeptidase; hyperthermophIle; 1.75A 84.82
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 84.46
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 83.78
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 83.63
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 83.48
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 83.15
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
Probab=100.00  E-value=2.2e-44  Score=350.31  Aligned_cols=252  Identities=27%  Similarity=0.453  Sum_probs=215.2

Q ss_pred             HHHHHHHhhCCCCchhhhhhhhhccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHH
Q psy16136          8 ALLLIIKKDLPTSVFTILLIINYLIIYHGIIRYSRVIKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHY   87 (332)
Q Consensus         8 ~~~~~l~~~~p~~~~~~~~~~~~~~d~~~~i~~lR~iKs~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~   87 (332)
                      ..++.|++.+|++.++         |+++++.++|+|||++||+.||+|++++++++.++++.++||+||.||++.+++.
T Consensus       144 ~~~~~l~~~~~~~~~~---------~~~~~i~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~el~~~~~~~  214 (427)
T 3ig4_A          144 AFAKHVREQYPHVTIG---------NVYPNICELRVFKTDEEIEIIKEAIAVTKDGIYNVLKHAKADMMEYELEAQFDFT  214 (427)
T ss_dssp             HHHHHHHHHCTTCEEE---------ECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHhhCCCCeEe---------EhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHH
Confidence            4677889999999888         8999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCcceeeeCCCCCcccCCCCCCCCCcccCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHH
Q psy16136         88 ILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAV  167 (332)
Q Consensus        88 ~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~~p~~r~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~  167 (332)
                      +.+. |+...+|+++|+||+|++.+||.    |++++|++||+|++|+|+.|+||++|+||||+++|+++++|+++|+++
T Consensus       215 ~~~~-G~~~~~f~~ivasG~n~~~~H~~----~~~~~l~~GdlvliD~G~~~~gY~sDitRT~~v~G~~s~~~~~~y~~v  289 (427)
T 3ig4_A          215 LKSS-GIKHHAFNTILASGKNATVLHYE----DNDAQIQNGDLVLLDLGAQKDYYNADISYTFPANGTFSSRQKQIYNIV  289 (427)
T ss_dssp             HHHT-TCCEESSCCEEEEGGGGGSTTCC----CCCSEECTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHH
T ss_pred             HHHc-CCCCCCCCCEEEECccccccccC----cccccCCCCCEEEEEeeeEECcEEEEEEEEEecCCCCCHHHHHHHHHH
Confidence            8865 76667899999999999999974    599999999999999999999999999999999889999999999999


Q ss_pred             HHHHHHHHHHcCCCCchhhhhHHHHHHHHhhcccCCcccCc--cccccccceeEeeeccccCCce--eeEeccCCcEEEE
Q psy16136        168 LSANRAVMEAAKPGVSWVDMHHLANKVVLSKLLDIGLLRGT--IDELMEESYFHWAFGVYEPDFY--GVIEMTTGRSILF  243 (332)
Q Consensus       168 ~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g~ghGi~~~~--~~~~~~~~~f~~~pGi~~pg~~--g~~~~~~g~~ilf  243 (332)
                      +++++++++++|||++++||++++++++.+.+.++|+.+++  ....+.++.-|.. |++.++.+  ....+++||++++
T Consensus       290 l~a~~~~i~~~kpG~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~i-Gl~vhe~~~~~~~~L~~GMV~ti  368 (427)
T 3ig4_A          290 LNALKETTEIIKPGLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFL-GLDTHDVGTYKDRVLEEGMVITI  368 (427)
T ss_dssp             HHHHHHHHHTCCTTCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBC-SSSSSCCCCCTTCBCCTTCEEEE
T ss_pred             HHHHHHHHHHccCCCcHHHHHHHHHHHHHHhHhhcCCccCcchhhccCCCCCCCcC-CcCCCcCCCCCCCEeCCCCEEEE
Confidence            99999999999999999999999999999986666654321  1222333333432 55544432  1234789999999


Q ss_pred             ecCCCcccccccCCCCChhHHHHHcCCceEEEcCcccchhhhhhhhhh
Q psy16136        244 APRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFSDEVMYSRAYLHDITA  291 (332)
Q Consensus       244 ~P~~~~~~~iW~G~~p~~e~~~~~~~~~~v~~~~~i~it~~~~~~l~~  291 (332)
                      ||++   |      .|.       + .-+|++||++.||++|.+.||+
T Consensus       369 EPgi---y------~~~-------~-g~GvriEd~vlVt~~G~e~LT~  399 (427)
T 3ig4_A          369 EPGL---Y------IEE-------E-SIGIRIEDDILVTKDGHENLSK  399 (427)
T ss_dssp             CCEE---E------EGG-------G-TEEEECBEEEEECSSSEEETTT
T ss_pred             CCEE---E------ECC-------C-ceEEEEeeEEEEeCCcCeECCC
Confidence            9998   4      111       0 2379999999999999999994
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 332
d2gg2a1262 d.127.1.1 (A:3-264) Methionine aminopeptidase {Esc 1e-22
d2v3za2264 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal 2e-19
d1qxya_249 d.127.1.1 (A:) Methionine aminopeptidase {Staphylo 2e-17
d1o0xa_249 d.127.1.1 (A:) Methionine aminopeptidase {Thermoto 7e-17
d1pv9a2221 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal 5e-16
d1chma2246 d.127.1.1 (A:157-402) Creatinase, catalytic (C-ter 3e-14
d1xgsa2218 d.127.1.1 (A:1-194,A:272-295) Methionine aminopept 3e-10
d1b6aa2295 d.127.1.1 (A:110-374,A:449-478) Methionine aminope 1e-07
d2v3za1176 c.55.2.1 (A:1-176) Aminopeptidase P {Escherichia c 2e-04
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Length = 262 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Escherichia coli [TaxId: 562]

 Score = 93.0 bits (230), Expect = 1e-22
 Identities = 41/205 (20%), Positives = 74/205 (36%), Gaps = 17/205 (8%)

Query: 44  IKTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSR-----HVA 98
           IKT  +++ MR A R+++E    +   V  G+   + + I   YI+    +      +  
Sbjct: 3   IKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHG 62

Query: 99  YTCICASGGNGAVLHYGHASAPNDKRVNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTE 158
           Y        N  V H       + K + DGD++  D+     G+  D T    + GK T 
Sbjct: 63  YPKSVCISINEVVCHGIPD---DAKLLKDGDIVNIDVTVIKDGFHGD-TSKMFIVGKPTI 118

Query: 159 KQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLLDI-------GLLRGTIDE 211
               +      +    +   KPG++  ++     K V ++   +       G+ RG  +E
Sbjct: 119 MGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEE 178

Query: 212 LME-ESYFHWAFGVYEPDFYGVIEM 235
                        V +P     IE 
Sbjct: 179 PQVLHYDSRETNVVLKPGMTFTIEP 203
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 264 Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Length = 249 Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Length = 249 Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 221 Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Length = 246 Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 218 Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure
>d2v3za1 c.55.2.1 (A:1-176) Aminopeptidase P {Escherichia coli [TaxId: 562]} Length = 176 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query332
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 100.0
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 100.0
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 100.0
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 100.0
d2v3za2264 Aminopeptidase P, C-terminal domain {Escherichia c 100.0
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 100.0
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 100.0
d1b6aa2295 Methionine aminopeptidase {Human (Homo sapiens) [T 99.97
d2v3za1176 Aminopeptidase P {Escherichia coli [TaxId: 562]} 98.74
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 92.95
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 92.19
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 90.43
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 88.74
d1b6aa2295 Methionine aminopeptidase {Human (Homo sapiens) [T 86.84
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 85.86
d2v3za2264 Aminopeptidase P, C-terminal domain {Escherichia c 81.86
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 81.72
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Aminopeptidase P, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=7.8e-39  Score=282.92  Aligned_cols=210  Identities=28%  Similarity=0.411  Sum_probs=178.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhCCCCCCCCcceeeeCCCCCcccCCCCCCCCCcc
Q psy16136         45 KTELELDVMRYASRISSEAHRSVMRKVSAGMYEYQAEAIFKHYILYVGGSRHVAYTCICASGGNGAVLHYGHASAPNDKR  124 (332)
Q Consensus        45 Ks~~EI~~mr~A~~ia~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~n~~~~h~~~~~~p~~r~  124 (332)
                      |||+||+.||+|++++++++.++++.++||+||.||++.+++.+.+. |.....|.+++.||.|+..+|+.    |++++
T Consensus         1 Ks~~EI~~mr~a~~i~~~~~~~~~~~i~~G~tE~ei~~~~~~~~~~~-G~~~~~~~~~v~~g~~~~~~h~~----~~~~~   75 (221)
T d1pv9a2           1 KTKEEIEIIEKACEIADKAVMAAIEEITEGKREREVAAKVEYLMKMN-GAEKPAFDTIIASGHRSALPHGV----ASDKR   75 (221)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TCSEESSCCEEEEGGGGGSTTCB----CCSCB
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHhc-ccccccccccccccccccccccc----ccccc
Confidence            99999999999999999999999999999999999999999998875 66667788999999999999964    59999


Q ss_pred             cCCCCeEEEEecceeCCeeeceeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhHHHHHHHHhhcc----
Q psy16136        125 VNDGDMLVFDMGSSYCGYASDITCSYPVNGKFTEKQAYIYNAVLSANRAVMEAAKPGVSWVDMHHLANKVVLSKLL----  200 (332)
Q Consensus       125 l~~Gd~v~iD~g~~~~GY~sD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~di~~a~~~~l~~~g~----  200 (332)
                      +++||+|++|+|+.++||++|++|||++ |+++++|+++|+++.++++++++++|||++++||++++++.+++.|+    
T Consensus        76 i~~gd~v~id~~~~~~gy~~d~~Rt~~v-G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~~  154 (221)
T d1pv9a2          76 IERGDLVVIDLGALYNHYNSDITRTIVV-GSPNEKQREIYEIVLEAQKRAVEAAKPGMTAKELDSIAREIIKEYGYGDYF  154 (221)
T ss_dssp             CCTTCEEEEEECEEETTEECCEEEEEES-SSCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGC
T ss_pred             ccccceEEEecccccCccccCcceeeec-CCccHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHhhhhhcccCCce
Confidence            9999999999999999999999999999 99999999999999999999999999999999999999999999864    


Q ss_pred             ----cCCcccCccccccccceeEeeeccccCCceeeEeccCCcEEEEecCCCcccccccCCCCChhHHHHHcCCceEEEc
Q psy16136        201 ----DIGLLRGTIDELMEESYFHWAFGVYEPDFYGVIEMTTGRSILFAPRLSEDYVVWMGQLPTLDEYKEKYQVDEVYFS  276 (332)
Q Consensus       201 ----ghGi~~~~~~~~~~~~~f~~~pGi~~pg~~g~~~~~~g~~ilf~P~~~~~~~iW~G~~p~~e~~~~~~~~~~v~~~  276 (332)
                          |||+...          +|-.|-+ .++  .-..+++||++.++|.+   |   .   |         +..++++|
T Consensus       155 ~~~~Ghg~g~~----------~~e~~~~-~~~--~~~~L~~gMv~~iep~~---~---~---~---------~~~g~r~E  203 (221)
T d1pv9a2         155 IHSLGHGVGLE----------IHEWPRI-SQY--DETVLKEGMVITIEPGI---Y---I---P---------KLGGVRIE  203 (221)
T ss_dssp             CSCSEEECSSS----------SSEEEEE-STT--CCCBCCTTCEEEECCEE---E---E---T---------TTEEEECB
T ss_pred             eccccCCCCcc----------cchhccc-ccC--CCceeCCCcEEEECCEE---E---E---C---------CCCEEEEe
Confidence                3333110          1101111 111  11247899999999987   2   1   1         23479999


Q ss_pred             Ccccchhhhhhhhhh
Q psy16136        277 DEVMYSRAYLHDITA  291 (332)
Q Consensus       277 ~~i~it~~~~~~l~~  291 (332)
                      |+++||++|.|.||+
T Consensus       204 d~v~Vte~G~e~Lt~  218 (221)
T d1pv9a2         204 DTVLITENGAKRLTK  218 (221)
T ss_dssp             EEEEECSSSEEESCC
T ss_pred             EEEEECCCcceECCC
Confidence            999999999999984
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2v3za1 c.55.2.1 (A:1-176) Aminopeptidase P {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure