Psyllid ID: psy16338


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
MDAGGAIADTQTPILITNIEWEMMDKTQFFPLSMLSSFCVRGSLYPLTLIKTRLQLQKHDQLYKGLLDAGAKIYKSEGLGGLYRGFWVSSVQIFSGVMYIATYEGVRHVITKNNIHNNQAKSLIAGAAASLVGQTIIVPFDVISQHLMVLGLATANQSKKKIVLEPLGITIDTSQTKFRTTMNIAQFIYKQDGFKGFYRGYLASLCAYVPNSAFWWTFYHIYQEKLNRVFPDDFSHLLIQCISGTLGGFTTTLITNPLDTIRARLQVQRTNSMLQTCKLLWIEEGFWMFSKGLSARLV
ccccccccccccccccccccccccccccHHHHHHHHHHHHccEEccHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHEEccHHHHHHHHHHccccccccccHHHccccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccHHHHHHHHHHHHcHHHHccccccccc
cccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccccHHHHHHHHHHHccccEEEcccccHHccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHccccEEEcccHHHHHHHcHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHccccEEEcccccccc
mdaggaiadtqtpiLITNIEwemmdktqffplsmlssfcvrgslyplTLIKTRLQLQKHDQLYKGLLDAGAKIykseglgglyrgFWVSSVQIFSGVMYIATYEGVRHVITKNNIHNNQAKSLIAGAAASLVGQTIIVPFDVISQHLMVLGLATanqskkkivleplgitidtsqtkFRTTMNIAQFIYKQDGFKGFYRGYLASLCAYVPNSAFWWTFYHIYQEKlnrvfpddfSHLLIQCISGTLGGFTTTLITNPLDTIRARLQVQRTNSMLQTCKLLWIEEGFWMFSKGLSARLV
mdaggaiadtqtpiLITNIEWEMMDKTQFFPLSMLSSFCVRGSLYPLTLIKTRLQLQKHDQLYKGLLDAGAKIYKSEGLGGLYRGFWVSSVQIFSGVMYIATYEGVRHVITKNNIHNNQAKSLIAGAAASLVGQTIIVPFDVISQHLMVLGLATAnqskkkivleplgitidtsqtkfrTTMNIAQFIYKQDGFKGFYRGYLASLCAYVPNSAFWWTFYHIYQEKLNRVFPDDFSHLLIQCISGTLGGFTTTLITNPLDTIRARLQVQRTNSMLQTCKLLWIEEGFWMFSKGLSARLV
MDAGGAIADTQTPILITNIEWEMMDKTQFFPLSMLSSFCVRGSLYPLTLIKTRLQLQKHDQLYKGLLDAGAKIYKSEGLGGLYRGFWVSSVQIFSGVMYIATYEGVRHVITKNNIHNNQAKSLIAGAAASLVGQTIIVPFDVISQHLMVLGLATANQSKKKIVLEPLGITIDTSQTKFRTTMNIAQFIYKQDGFKGFYRGYLASLCAYVPNSAFWWTFYHIYQEKLNRVFPDDFSHLLIQCISgtlggftttlitNPLDTIRARLQVQRTNSMLQTCKLLWIEEGFWMFSKGLSARLV
********DTQTPILITNIEWEMMDKTQFFPLSMLSSFCVRGSLYPLTLIKTRLQLQKHDQLYKGLLDAGAKIYKSEGLGGLYRGFWVSSVQIFSGVMYIATYEGVRHVITKNNIHNNQAKSLIAGAAASLVGQTIIVPFDVISQHLMVLGLATANQSKKKIVLEPLGITIDTSQTKFRTTMNIAQFIYKQDGFKGFYRGYLASLCAYVPNSAFWWTFYHIYQEKLNRVFPDDFSHLLIQCISGTLGGFTTTLITNPLDTIRARLQVQRTNSMLQTCKLLWIEEGFWMFSKG******
********************WEMMDKTQFFPLSMLSSFCVRGSLYPLTLIKTRL*************DAGAKIYKSEGLGGLYRGFWVSSVQIFSGVMYIATYEGVRHVITKNNIHNNQAKSLIAGAAASLVGQTIIVPFDVISQHLMVLGL***********************TKFRTTMNIAQFIYKQDGFKGFYRGYLASLCAYVPNSAFWWTFYHIYQEKLNR****DFSHLLIQCISGTLGGFTTTLITNPLDTIRARLQVQRTNSMLQTCKLLWIEEGFWMFSKGLSARLV
MDAGGAIADTQTPILITNIEWEMMDKTQFFPLSMLSSFCVRGSLYPLTLIKTRLQLQKHDQLYKGLLDAGAKIYKSEGLGGLYRGFWVSSVQIFSGVMYIATYEGVRHVITKNNIHNNQAKSLIAGAAASLVGQTIIVPFDVISQHLMVLGLATANQSKKKIVLEPLGITIDTSQTKFRTTMNIAQFIYKQDGFKGFYRGYLASLCAYVPNSAFWWTFYHIYQEKLNRVFPDDFSHLLIQCISGTLGGFTTTLITNPLDTIRARLQVQRTNSMLQTCKLLWIEEGFWMFSKGLSARLV
*****AIADTQTPILITNIEWEMMDKTQFFPLSMLSSFCVRGSLYPLTLIKTRLQLQKHDQLYKGLLDAGAKIYKSEGLGGLYRGFWVSSVQIFSGVMYIATYEGVRHVITKNNIHNNQAKSLIAGAAASLVGQTIIVPFDVISQHLMVLGLAT*********************TKFRTTMNIAQFIYKQDGFKGFYRGYLASLCAYVPNSAFWWTFYHIYQEKLNRVFPDDFSHLLIQCISGTLGGFTTTLITNPLDTIRARLQVQRTNSMLQTCKLLWIEEGFWMFSKGLSARLV
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MDAGGAIADTQTPILITNIEWEMMDKTQFFPLSMLSSFCVRGSLYPLTLIKTRLQLQKHDQLYKGLLDAGAKIYKSEGLGGLYRGFWVSSVQIFSGVMYIATYEGVRHVITKNNIHNNQAKSLIAGAAASLVGQTIIVPFDVISQHLMVLGLATANQSKKKIVLEPLGITIDTSQTKFRTTMNIAQFIYKQDGFKGFYRGYLASLCAYVPNSAFWWTFYHIYQEKLNRVFPDDFSHLLIQCISGTLGGFTTTLITNPLDTIRARLQVQRTNSMLQTCKLLWIEEGFWMFSKGLSARLV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query298 2.2.26 [Sep-21-2011]
Q8BGF9314 Solute carrier family 25 yes N/A 0.929 0.882 0.441 3e-65
Q5RD67314 Solute carrier family 25 yes N/A 0.919 0.872 0.439 1e-64
Q96H78314 Solute carrier family 25 yes N/A 0.919 0.872 0.439 2e-64
Q54VX4345 Mitochondrial substrate c yes N/A 0.825 0.713 0.264 3e-20
Q55E45303 Mitochondrial substrate c no N/A 0.798 0.785 0.275 6e-19
Q552L9366 Mitochondrial substrate c no N/A 0.842 0.685 0.268 6e-18
Q9H1K4315 Mitochondrial glutamate c no N/A 0.835 0.790 0.259 3e-17
Q9DB41320 Mitochondrial glutamate c no N/A 0.838 0.781 0.252 4e-17
Q505J6320 Mitochondrial glutamate c no N/A 0.838 0.781 0.245 1e-16
Q55DY8308 Mitoferrin OS=Dictyosteli no N/A 0.802 0.775 0.245 2e-16
>sp|Q8BGF9|S2544_MOUSE Solute carrier family 25 member 44 OS=Mus musculus GN=Slc25a44 PE=2 SV=1 Back     alignment and function desciption
 Score =  248 bits (634), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 125/283 (44%), Positives = 177/283 (62%), Gaps = 6/283 (2%)

Query: 16  ITNIEWEMMDKTQFFPLSMLSSFCVRGSLYPLTLIKTRLQLQKHDQLYKGLLDAGAKIYK 75
           I  IEWE +DK +F+   +  +  +R S+YP TLI+TRLQ+QK   LY G  DA  KI +
Sbjct: 7   IQIIEWEHLDKKKFYVFGVAMTMMIRVSVYPFTLIRTRLQVQKGKSLYHGTFDAFVKILR 66

Query: 76  SEGLGGLYRGFWVSSVQIFSGVMYIATYEGVRHVITKNNIHNNQAKSLIAGAAASLVGQT 135
           ++G+ GLYRGF V++  + SG  Y+ TYE  R  +   +  +N  KSL+AG +ASLV Q+
Sbjct: 67  ADGVAGLYRGFLVNTFTLISGQCYVTTYELTRKFVADYS-QSNTVKSLVAGGSASLVAQS 125

Query: 136 IIVPFDVISQHLMVLGLATANQSKKKIVLEPLGITIDTSQTKFRTTMNIAQFIYKQDGFK 195
           I VP DV+SQHLM+       + +K    +  G         F  T +I + I + DG +
Sbjct: 126 ITVPIDVVSQHLMM-----QRKGEKMGRFQVHGNLEGQGVIAFGQTKDIIRQILRADGLR 180

Query: 196 GFYRGYLASLCAYVPNSAFWWTFYHIYQEKLNRVFPDDFSHLLIQCISGTLGGFTTTLIT 255
           GFYRGY+ASL  Y+PNSA WW FYH Y E+L+R+ P +  H++ Q ISG L   T +++T
Sbjct: 181 GFYRGYVASLLTYIPNSAVWWPFYHFYAEQLSRLCPQECPHIVFQAISGPLAAATASILT 240

Query: 256 NPLDTIRARLQVQRTNSMLQTCKLLWIEEGFWMFSKGLSARLV 298
           NP+D IR R+QV+  +S++ T + L  EEG W   KGLSAR++
Sbjct: 241 NPMDVIRTRVQVEGKSSIVLTFRQLMAEEGPWGLMKGLSARII 283





Mus musculus (taxid: 10090)
>sp|Q5RD67|S2544_PONAB Solute carrier family 25 member 44 OS=Pongo abelii GN=SLC25A44 PE=2 SV=2 Back     alignment and function description
>sp|Q96H78|S2544_HUMAN Solute carrier family 25 member 44 OS=Homo sapiens GN=SLC25A44 PE=2 SV=1 Back     alignment and function description
>sp|Q54VX4|MCFJ_DICDI Mitochondrial substrate carrier family protein J OS=Dictyostelium discoideum GN=mcfJ PE=2 SV=1 Back     alignment and function description
>sp|Q55E45|MCFE_DICDI Mitochondrial substrate carrier family protein E OS=Dictyostelium discoideum GN=mcfE PE=3 SV=1 Back     alignment and function description
>sp|Q552L9|S2540_DICDI Mitochondrial substrate carrier family protein H OS=Dictyostelium discoideum GN=mcfH PE=3 SV=1 Back     alignment and function description
>sp|Q9H1K4|GHC2_HUMAN Mitochondrial glutamate carrier 2 OS=Homo sapiens GN=SLC25A18 PE=2 SV=1 Back     alignment and function description
>sp|Q9DB41|GHC2_MOUSE Mitochondrial glutamate carrier 2 OS=Mus musculus GN=Slc25a18 PE=2 SV=4 Back     alignment and function description
>sp|Q505J6|GHC2_RAT Mitochondrial glutamate carrier 2 OS=Rattus norvegicus GN=Slc25a18 PE=2 SV=2 Back     alignment and function description
>sp|Q55DY8|MFRN_DICDI Mitoferrin OS=Dictyostelium discoideum GN=mcfF PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query298
193652698327 PREDICTED: solute carrier family 25 memb 0.949 0.865 0.640 1e-105
350415263328 PREDICTED: solute carrier family 25 memb 0.979 0.890 0.602 1e-105
340725549328 PREDICTED: solute carrier family 25 memb 0.979 0.890 0.602 1e-104
380024655327 PREDICTED: solute carrier family 25 memb 0.979 0.892 0.601 1e-104
383858577328 PREDICTED: solute carrier family 25 memb 0.963 0.875 0.608 1e-104
48098509327 PREDICTED: solute carrier family 25 memb 0.976 0.889 0.602 1e-103
307193497328 Solute carrier family 25 member 44 [Harp 0.973 0.884 0.604 1e-103
332024279 409 Solute carrier family 25 member 44 [Acro 0.959 0.699 0.607 1e-103
307182747329 Solute carrier family 25 member 44 [Camp 0.973 0.881 0.599 1e-102
91083607321 PREDICTED: similar to AGAP003208-PA [Tri 0.963 0.894 0.616 1e-102
>gi|193652698|ref|XP_001948149.1| PREDICTED: solute carrier family 25 member 44-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 182/284 (64%), Positives = 226/284 (79%), Gaps = 1/284 (0%)

Query: 16  ITNIEWEMMDKTQFFPLSMLSSFCVRGSLYPLTLIKTRLQLQKHDQLYKGLLDAGAKIYK 75
           ++ IEW+MMDKT+F PLSMLSSFCVR +LYPLTLIKTRLQ+QKH ++YKGLLDA  +IY 
Sbjct: 13  VSTIEWDMMDKTKFLPLSMLSSFCVRCTLYPLTLIKTRLQIQKHGEMYKGLLDAANRIYH 72

Query: 76  SEGLGGLYRGFWVSSVQIFSGVMYIATYEGVRHVITKNNIHNNQAKSLIAGAAASLVGQT 135
           +EG+ GLYRGFWVSS Q+ SG  YI  YE  RH+         + +S++AG  AS+ GQT
Sbjct: 73  TEGMSGLYRGFWVSSAQVLSGAAYIGAYEQTRHMTAPYLQQWPEIRSMVAGGVASVFGQT 132

Query: 136 IIVPFDVISQHLMVLGLATANQSKKKIV-LEPLGITIDTSQTKFRTTMNIAQFIYKQDGF 194
           IIVPFDV+SQHLM+LGL+T++  K KI+   PLGI +D S++KFRTT++IAQ +Y+QDGF
Sbjct: 133 IIVPFDVVSQHLMMLGLSTSSIDKNKIIYFRPLGIHLDISKSKFRTTLDIAQCVYQQDGF 192

Query: 195 KGFYRGYLASLCAYVPNSAFWWTFYHIYQEKLNRVFPDDFSHLLIQCISGTLGGFTTTLI 254
           KGFYRGY+AS+C Y PNSA WW+FY I+Q++L +  P + S L +Q ISG L GFTTTLI
Sbjct: 193 KGFYRGYVASVCTYAPNSALWWSFYTIFQDQLEKRCPVNTSLLFLQSISGVLAGFTTTLI 252

Query: 255 TNPLDTIRARLQVQRTNSMLQTCKLLWIEEGFWMFSKGLSARLV 298
           TNP+DTIRARLQVQRTNS++ T   LW EEG +MFSKGLSARLV
Sbjct: 253 TNPMDTIRARLQVQRTNSIVGTFNALWKEEGMFMFSKGLSARLV 296




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350415263|ref|XP_003490585.1| PREDICTED: solute carrier family 25 member 44-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340725549|ref|XP_003401131.1| PREDICTED: solute carrier family 25 member 44-like isoform 1 [Bombus terrestris] gi|340725551|ref|XP_003401132.1| PREDICTED: solute carrier family 25 member 44-like isoform 2 [Bombus terrestris] Back     alignment and taxonomy information
>gi|380024655|ref|XP_003696108.1| PREDICTED: solute carrier family 25 member 44-like [Apis florea] Back     alignment and taxonomy information
>gi|383858577|ref|XP_003704777.1| PREDICTED: solute carrier family 25 member 44-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|48098509|ref|XP_394090.1| PREDICTED: solute carrier family 25 member 44-like [Apis mellifera] Back     alignment and taxonomy information
>gi|307193497|gb|EFN76274.1| Solute carrier family 25 member 44 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|332024279|gb|EGI64481.1| Solute carrier family 25 member 44 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307182747|gb|EFN69871.1| Solute carrier family 25 member 44 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|91083607|ref|XP_969406.1| PREDICTED: similar to AGAP003208-PA [Tribolium castaneum] gi|270007841|gb|EFA04289.1| hypothetical protein TcasGA2_TC014580 [Tribolium castaneum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query298
FB|FBgn0039223339 CG5805 [Drosophila melanogaste 0.966 0.849 0.564 3.7e-80
ZFIN|ZDB-GENE-041114-38324 slc25a44a "solute carrier fami 0.926 0.851 0.459 1.1e-62
ZFIN|ZDB-GENE-050320-89316 slc25a44b "solute carrier fami 0.919 0.867 0.439 1.2e-58
UNIPROTKB|F1RLQ4331 SLC25A44 "Uncharacterized prot 0.919 0.827 0.428 1.4e-57
MGI|MGI:2444391314 Slc25a44 "solute carrier famil 0.919 0.872 0.428 1.4e-57
RGD|1307244337 Slc25a44 "solute carrier famil 0.919 0.813 0.428 1.4e-57
UNIPROTKB|A0JN83314 SLC25A44 "Uncharacterized prot 0.919 0.872 0.425 3.6e-57
UNIPROTKB|Q96H78314 SLC25A44 "Solute carrier famil 0.919 0.872 0.425 3.6e-57
UNIPROTKB|F1PD97342 SLC25A44 "Uncharacterized prot 0.963 0.839 0.412 2.5e-56
UNIPROTKB|E9PGQ0291 SLC25A44 "Solute carrier famil 0.406 0.415 0.446 2e-53
FB|FBgn0039223 CG5805 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
 Identities = 167/296 (56%), Positives = 208/296 (70%)

Query:     4 GGAIADTQTPILITNIEWEMMDKTQFFPLSMLSSFCVRGSLYPLTLIKTRLQLQKHDQLY 63
             GGA A+  T   I  IEW+MM+KT+FFPLSMLSSF VR  L+PLT+IKT+LQ+Q    +Y
Sbjct:    20 GGA-AEGAT--YIRTIEWDMMNKTKFFPLSMLSSFSVRCCLFPLTVIKTQLQVQHKSDVY 76

Query:    64 KGLLDAGAKIYKSEGLGGLYRGFWVSSVQIFSGVMYIATYEGVRHVITKNNIH-NNQAKS 122
             KG++D   KIY+SEG+ GLYRGFW+SSVQI SGV YI+TYEGVRHV+  N++   ++ K+
Sbjct:    77 KGMVDCAMKIYRSEGVPGLYRGFWISSVQIVSGVFYISTYEGVRHVL--NDLGAGHRMKA 134

Query:   123 LIAGAAASLVGQTIIVPFDVISQHLMVLGLATANQSKKKIVLEPLGITIDTSQTKFRTTM 182
             L  G  ASLVGQTIIVPFDVISQH MVLG++    SK  I   PLGI     +++   +M
Sbjct:   135 LAGGGCASLVGQTIIVPFDVISQHAMVLGMSAHAGSKGDI--NPLGIKSWPGRSRLHISM 192

Query:   183 NIAQFIYKQDGFKGFYRGYLASLCAYVPNSAFWWTFYHIYQEKLNRVFPDDFSHLLIQCI 242
             +I + I ++DGF+GFYRGY ASL AYVPNSA WW FYH+YQ++L R+ P   SHL IQC+
Sbjct:   193 DIGREIMRRDGFRGFYRGYTASLMAYVPNSAMWWAFYHLYQDELFRICPVWVSHLFIQCV 252

Query:   243 SXXXXXXXXXXXXNPLDTIRARLQVQRTNSMLQTCKLLWIEEGFWMFSKGLSARLV 298
             +            NPLD +RARLQV R +SM    + LW EE    F KGLSARLV
Sbjct:   253 AGSLGGFTTTILTNPLDIVRARLQVHRLDSMSVAFRELWQEEKLNCFFKGLSARLV 308




GO:0005740 "mitochondrial envelope" evidence=ISS
GO:0022857 "transmembrane transporter activity" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
ZFIN|ZDB-GENE-041114-38 slc25a44a "solute carrier family 25, member 44 a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050320-89 slc25a44b "solute carrier family 25, member 44 b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1RLQ4 SLC25A44 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:2444391 Slc25a44 "solute carrier family 25, member 44" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1307244 Slc25a44 "solute carrier family 25, member 44" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|A0JN83 SLC25A44 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q96H78 SLC25A44 "Solute carrier family 25 member 44" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PD97 SLC25A44 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E9PGQ0 SLC25A44 "Solute carrier family 25 member 44" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q96H78S2544_HUMANNo assigned EC number0.43920.91940.8726yesN/A
Q8BGF9S2544_MOUSENo assigned EC number0.44160.92950.8821yesN/A
Q5RD67S2544_PONABNo assigned EC number0.43920.91940.8726yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-15
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 5e-13
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-12
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-07
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 3e-06
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 0.001
PTZ00169 300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 0.002
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 70.4 bits (173), Expect = 2e-15
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 7/84 (8%)

Query: 34  MLSSFCVRGSLYPLTLIKTRLQLQ--KHDQLYKGLLDAGAKIYKSEGLGGLYRGFWVSSV 91
            +++       YPL ++KTRLQ       + YKG+LD   KIYK EG+ GLY+G   + +
Sbjct: 17  AIAATVT----YPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLYKGLLPNLL 72

Query: 92  QIFSGVM-YIATYEGVRHVITKNN 114
           ++      Y  TYE ++ ++ K  
Sbjct: 73  RVAPAAAIYFGTYETLKKLLLKKL 96


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 298
KOG0764|consensus299 100.0
KOG0752|consensus320 100.0
KOG0758|consensus297 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0754|consensus294 100.0
KOG0757|consensus319 100.0
KOG0762|consensus311 100.0
KOG0753|consensus317 100.0
KOG0760|consensus302 100.0
KOG0765|consensus333 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0759|consensus286 100.0
KOG0761|consensus361 100.0
KOG0751|consensus694 100.0
KOG0770|consensus353 100.0
KOG0756|consensus299 100.0
KOG0036|consensus463 100.0
KOG0768|consensus323 100.0
KOG0749|consensus298 100.0
KOG0766|consensus297 100.0
KOG0750|consensus304 100.0
KOG0769|consensus308 100.0
KOG0763|consensus301 100.0
KOG0755|consensus320 100.0
KOG0767|consensus333 100.0
KOG0752|consensus320 100.0
KOG0764|consensus299 100.0
KOG0753|consensus317 100.0
KOG0757|consensus319 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0768|consensus323 99.98
KOG0760|consensus302 99.98
KOG0762|consensus311 99.98
KOG0758|consensus297 99.97
KOG0759|consensus286 99.97
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0754|consensus294 99.97
KOG0751|consensus694 99.96
KOG0756|consensus299 99.95
KOG0761|consensus361 99.95
KOG0749|consensus298 99.95
KOG0750|consensus304 99.94
KOG0766|consensus297 99.94
KOG0755|consensus320 99.94
KOG0765|consensus333 99.94
KOG0763|consensus301 99.93
KOG0036|consensus463 99.93
KOG0769|consensus 308 99.93
KOG0770|consensus353 99.92
KOG0767|consensus 333 99.91
KOG2745|consensus321 99.9
KOG1519|consensus297 99.89
KOG2954|consensus427 99.78
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.73
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.65
KOG2745|consensus 321 99.64
KOG1519|consensus297 99.55
KOG2954|consensus427 98.81
>KOG0764|consensus Back     alignment and domain information
Probab=100.00  E-value=2.9e-56  Score=359.05  Aligned_cols=253  Identities=27%  Similarity=0.387  Sum_probs=227.0

Q ss_pred             ccchhhhHhHhhhhhcccccchhhhhhhhcccc----cccccccHHHHHHHHHHhhcccccccccccccc-chhhhhHHH
Q psy16338         26 KTQFFPLSMLSSFCVRGSLYPLTLIKTRLQLQK----HDQLYKGLLDAGAKIYKSEGLGGLYRGFWVSSV-QIFSGVMYI  100 (298)
Q Consensus        26 ~~~~~~~g~~a~~~~~~~~~Pld~vk~~~Q~~~----~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~-~~~~~~~~f  100 (298)
                      .+.+.++|..+|+++.+++||||++|+|.|++.    ....|+++.++++.|++.||+||||+|+.|.++ ..+++++||
T Consensus         5 ~~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiYF   84 (299)
T KOG0764|consen    5 QWEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGRTSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLYF   84 (299)
T ss_pred             chhhhhhhhhhhhhhhhhccchhHhhhhhhhccCccccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHHHH
Confidence            345569999999999999999999999999993    457899999999999999999999999999999 688999999


Q ss_pred             HHHHHHHHHHhhcCC--CchhHHHHHHHhHHhhhhhhccccHHHHHHHHHHhcccccccccchhcccccccccccCcccc
Q psy16338        101 ATYEGVRHVITKNNI--HNNQAKSLIAGAAASLVGQTIIVPFDVISQHLMVLGLATANQSKKKIVLEPLGITIDTSQTKF  178 (298)
Q Consensus       101 ~~~~~~~~~~~~~~~--~~~~~~~~~ag~~ag~~~~~i~~P~e~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y  178 (298)
                      .+|+..|..+.+...  ..+...++.+++.||+++.++++|++++|+|++.+...                   .....|
T Consensus        85 ~~Y~~~K~~~~~~~~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~-------------------~~~~~Y  145 (299)
T KOG0764|consen   85 FFYDFLKSFITEGFNSGLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKN-------------------VQSTAY  145 (299)
T ss_pred             HHHHHHHHHHhcCCCcccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhccc-------------------cccccc
Confidence            999999999866533  23788999999999999999999999999999999875                   344799


Q ss_pred             ccHHHHHHHHHhhhchhHhhhhhhhhhccccccchHHHHHHHHHHHHhhccCCCC---chhHHHHHHHHHHHHHhHhhhc
Q psy16338        179 RTTMNIAQFIYKQDGFKGFYRGYLASLCAYVPNSAFWWTFYHIYQEKLNRVFPDD---FSHLLIQCISGTLGGFTTTLIT  255 (298)
Q Consensus       179 ~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~~~it  255 (298)
                      +++++++++|+++||++|||+|+.|.++. +.+.+++|..||.+|..+.+..+..   ..+....+..+.++.++|..+|
T Consensus       146 ~~~f~a~rki~k~EG~rgLY~GlVP~L~G-vshgAiQF~~YE~lK~~~~~~~~~~~d~~l~n~~~i~~as~SKv~Ast~T  224 (299)
T KOG0764|consen  146 KGMFDALRKIYKEEGFRGLYKGLVPGLLG-VSHGAIQFPAYEELKLRKNRKQGRSTDNHLSNLDYIALASLSKVFASTLT  224 (299)
T ss_pred             ccHHHHHHHHHHHHhHHHHHhhhhhHhhh-hchhhhhhhhHHHHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999995 7889999999999999885443322   3456677777779999999999


Q ss_pred             ccHHHHHHHHhccC----CccHHHHHHHHHHhhchhhhhcccccccC
Q psy16338        256 NPLDTIRARLQVQR----TNSMLQTCKLLWIEEGFWMFSKGLSARLV  298 (298)
Q Consensus       256 ~Pld~vk~r~q~~~----~~~~~~~~~~i~~~eG~~~ly~G~~~~ll  298 (298)
                      ||++|+|+|||.++    |+++++|++++|+.||++|||||+.+++|
T Consensus       225 YP~qVlRtRLQ~~~~~~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLv  271 (299)
T KOG0764|consen  225 YPHQVLRTRLQDQSDNPRYRGVFDLIKKTWRNEGFRGFYKGLATNLV  271 (299)
T ss_pred             chHHHHHHHHHhcccCcccccHHHHHHHHHHHhchhhHHHHhHHHHh
Confidence            99999999999984    99999999999999999999999999875



>KOG0752|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 7e-06
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 8e-05
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 55/258 (21%), Positives = 99/258 (38%), Gaps = 43/258 (16%) Query: 32 LSMLSSFCVRG--------SLYPLTLIKTRLQLQ------KHDQLYKGLLDAGAKIYKSE 77 LS L F G ++ P+ +K LQ+Q ++ YKG++D +I K + Sbjct: 5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQ 64 Query: 78 GLGGLYRGFWVSSVQIF-SGVMYIATYEGVRHVITKNNIHNNQ-----AKSLIAGAAASL 131 G +RG + ++ F + + A + + + + Q A +L +G AA Sbjct: 65 GFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGA 124 Query: 132 VGQTIIVPFDVISQHLMVLGLATANQSKKKIVLEPLGITIDTSQTKFRTTMNIAQFIYKQ 191 + P D L A+ K +Q +F N I+K Sbjct: 125 TSLCFVYPLDFARTRL------AADVGK------------GAAQREFTGLGNCITKIFKS 166 Query: 192 DGFKGFYRGYLASLCAYVPNSAFWWTFYHIYQEKLNRVFPDDFS-HLLIQCISXXXXXXX 250 DG +G Y+G+ S+ + A ++ Y + L PD + H+++ + Sbjct: 167 DGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGML----PDPKNVHIIVSWMIAQTVTAV 222 Query: 251 XXXXXNPLDTIRARLQVQ 268 P DT+R R+ +Q Sbjct: 223 AGLVSYPFDTVRRRMMMQ 240
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-37
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-31
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 7e-22
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-13
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 7e-34
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-22
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-12
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-11
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 6e-06
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  133 bits (338), Expect = 2e-37
 Identities = 55/276 (19%), Positives = 105/276 (38%), Gaps = 45/276 (16%)

Query: 45  YPLTLIKTRLQLQ------KHDQLYKGLLDAGAKIYKSEGLGGLYRGFWVSSVQIF--SG 96
            P+  +K  LQ+Q        ++ YKG++D   +I K +G    +RG   + ++ F    
Sbjct: 26  APIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQA 85

Query: 97  VMYIATYEGVRHVITKNNIHNNQ-----AKSLIAGAAASLVGQTIIVPFDVISQHLMVLG 151
           + + A  +  + +       + Q     A +L +G AA       + P D     L    
Sbjct: 86  LNF-AFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRL---- 140

Query: 152 LATANQSKKKIVLEPLGITIDTSQTKFRTTMNIAQFIYKQDGFKGFYRGYLASLCAYVPN 211
              A    K             +Q +F    N    I+K DG +G Y+G+  S+   +  
Sbjct: 141 ---AADVGKG-----------AAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIY 186

Query: 212 SAFWWTFYHIYQEKLNRVFPDDF-SHLLIQCISGTLGGFTTTLITNPLDTIRARLQVQ-- 268
            A ++  Y    +    + PD    H+++  +          L++ P DT+R R+ +Q  
Sbjct: 187 RAAYFGVY----DTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSG 242

Query: 269 ------RTNSMLQTCKLLWIEEGFWMFSKGLSARLV 298
                      +   + +  +EG   F KG  + ++
Sbjct: 243 RKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVL 278


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query298
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=9.1e-54  Score=369.99  Aligned_cols=254  Identities=20%  Similarity=0.312  Sum_probs=222.3

Q ss_pred             CCccchhhhHhHhhhhhcccccchhhhhhhhccccc------ccccccHHHHHHHHHHhhcccccccccccccc-chhhh
Q psy16338         24 MDKTQFFPLSMLSSFCVRGSLYPLTLIKTRLQLQKH------DQLYKGLLDAGAKIYKSEGLGGLYRGFWVSSV-QIFSG   96 (298)
Q Consensus        24 ~~~~~~~~~g~~a~~~~~~~~~Pld~vk~~~Q~~~~------~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~-~~~~~   96 (298)
                      .+.+.++++|+++++++.++++|+|++|+|+|++..      ...|+++++++++++++||++|||||+.++++ .++..
T Consensus         5 ~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~   84 (297)
T 1okc_A            5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ   84 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHHH
Confidence            345678999999999999999999999999999853      24689999999999999999999999999999 68889


Q ss_pred             hHHHHHHHHHHHHHhhc-CCC----chhHHHHHHHhHHhhhhhhccccHHHHHHHHHHhcccccccccchhccccccccc
Q psy16338         97 VMYIATYEGVRHVITKN-NIH----NNQAKSLIAGAAASLVGQTIIVPFDVISQHLMVLGLATANQSKKKIVLEPLGITI  171 (298)
Q Consensus        97 ~~~f~~~~~~~~~~~~~-~~~----~~~~~~~~ag~~ag~~~~~i~~P~e~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~  171 (298)
                      +++|.+||.+++.+... +..    ......+++|++||+++.++++|+|+||+|+|.+....                 
T Consensus        85 ~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~-----------------  147 (297)
T 1okc_A           85 ALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG-----------------  147 (297)
T ss_dssp             HHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS-----------------
T ss_pred             HHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCC-----------------
Confidence            99999999999854332 221    23467899999999999999999999999999975321                 


Q ss_pred             ccCccccccHHHHHHHHHhhhchhHhhhhhhhhhccccccchHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHhH
Q psy16338        172 DTSQTKFRTTMNIAQFIYKQDGFKGFYRGYLASLCAYVPNSAFWWTFYHIYQEKLNRVFPDDFSHLLIQCISGTLGGFTT  251 (298)
Q Consensus       172 ~~~~~~y~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  251 (298)
                       ....+|+++++++++|+++||++|||||+.+++++.++..+++|.+||.+|+.+.+..   ..+....+++|+++++++
T Consensus       148 -~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~---~~~~~~~~~~g~~ag~~a  223 (297)
T 1okc_A          148 -AAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK---NVHIIVSWMIAQTVTAVA  223 (297)
T ss_dssp             -TTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG---CSCHHHHHHHHHHHHHHH
T ss_pred             -CcCcCCCCHHHHHHHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccCC---CccHHHHHHHHHHHHHHH
Confidence             2345788999999999999999999999999999999999999999999999765431   234677889999999999


Q ss_pred             hhhcccHHHHHHHHhccC--------CccHHHHHHHHHHhhchhhhhcccccccC
Q psy16338        252 TLITNPLDTIRARLQVQR--------TNSMLQTCKLLWIEEGFWMFSKGLSARLV  298 (298)
Q Consensus       252 ~~it~Pld~vk~r~q~~~--------~~~~~~~~~~i~~~eG~~~ly~G~~~~ll  298 (298)
                      +++++|+|+||+|+|.+.        |.++.+|+++|+++||++|||||+.|+++
T Consensus       224 ~~~t~P~dvvktr~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~  278 (297)
T 1okc_A          224 GLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVL  278 (297)
T ss_dssp             HHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHH
T ss_pred             HHhcChHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHH
Confidence            999999999999999863        78999999999999999999999999864



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 298
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 9e-16
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-10
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-09
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 8e-09
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-04
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 73.6 bits (179), Expect = 9e-16
 Identities = 48/284 (16%), Positives = 101/284 (35%), Gaps = 41/284 (14%)

Query: 35  LSSFCVRGSLYPLTLIKTRLQLQ------KHDQLYKGLLDAGAKIYKSEGLG-GLYRGFW 87
           +++   + ++ P+  +K  LQ+Q        ++ YKG++D   +I K +G          
Sbjct: 15  VAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLA 74

Query: 88  VSSVQIFSGVMYIATYEGVRHVITKNNIHNNQ-----AKSLIAGAAASLVGQTIIVPFDV 142
                  +  +  A  +  + +       + Q     A +L +G AA       + P D 
Sbjct: 75  NVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDF 134

Query: 143 ISQHLMVLGLATANQSKKKIVLEPLGITIDTSQTKFRTTMNIAQFIYKQDGFKGFYRGYL 202
               L                     +    +Q +F    N    I+K DG +G Y+G+ 
Sbjct: 135 ARTRLAA------------------DVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFN 176

Query: 203 ASLCAYVPNSAFWWTFYHIYQEKLNRVFPDDFSHLLIQCISGTLGGFTTTLITNPLDTIR 262
            S+   +   A ++  Y   +     +      H+++  +          L++ P DT+R
Sbjct: 177 VSVQGIIIYRAAYFGVYDTAK---GMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVR 233

Query: 263 ARLQVQ--------RTNSMLQTCKLLWIEEGFWMFSKGLSARLV 298
            R+ +Q             +   + +  +EG   F KG  + ++
Sbjct: 234 RRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVL 277


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query298
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.96
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=4.1e-50  Score=344.32  Aligned_cols=255  Identities=20%  Similarity=0.295  Sum_probs=225.8

Q ss_pred             cCCccchhhhHhHhhhhhcccccchhhhhhhhccccc------ccccccHHHHHHHHHHhhcccccccccccccc-chhh
Q psy16338         23 MMDKTQFFPLSMLSSFCVRGSLYPLTLIKTRLQLQKH------DQLYKGLLDAGAKIYKSEGLGGLYRGFWVSSV-QIFS   95 (298)
Q Consensus        23 ~~~~~~~~~~g~~a~~~~~~~~~Pld~vk~~~Q~~~~------~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~-~~~~   95 (298)
                      +.+.++.|++|++|++++.+++||||+||+|+|++..      ...|+++++++++++++||+++||+|+.+.++ .++.
T Consensus         3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~   82 (292)
T d1okca_           3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   82 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcc
Confidence            3566788999999999999999999999999999753      35688999999999999999999999999999 6889


Q ss_pred             hhHHHHHHHHHHHHHhhcCCC-----chhHHHHHHHhHHhhhhhhccccHHHHHHHHHHhcccccccccchhcccccccc
Q psy16338         96 GVMYIATYEGVRHVITKNNIH-----NNQAKSLIAGAAASLVGQTIIVPFDVISQHLMVLGLATANQSKKKIVLEPLGIT  170 (298)
Q Consensus        96 ~~~~f~~~~~~~~~~~~~~~~-----~~~~~~~~ag~~ag~~~~~i~~P~e~ik~r~q~~~~~~~~~~~~~~~~~~~~~~  170 (298)
                      .+++|.+|+.+++.+......     ......+.+|.+|++++.++++|+|++|+|+|.+....                
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~----------------  146 (292)
T d1okca_          83 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG----------------  146 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS----------------
T ss_pred             cchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeecccccc----------------
Confidence            999999999999988766322     23456788999999999999999999999999986542                


Q ss_pred             cccCccccccHHHHHHHHHhhhchhHhhhhhhhhhccccccchHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHh
Q psy16338        171 IDTSQTKFRTTMNIAQFIYKQDGFKGFYRGYLASLCAYVPNSAFWWTFYHIYQEKLNRVFPDDFSHLLIQCISGTLGGFT  250 (298)
Q Consensus       171 ~~~~~~~y~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  250 (298)
                        ....+|.+.++++++++++||+++||+|+.+++++++++.+++|..||.+|+.+.+..   .......++++.+++.+
T Consensus       147 --~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~  221 (292)
T d1okca_         147 --AAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK---NVHIIVSWMIAQTVTAV  221 (292)
T ss_dssp             --TTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG---CSCHHHHHHHHHHHHHH
T ss_pred             --ccccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhccccc---ccchHHHHHHHHHHHHH
Confidence              4455788899999999999999999999999999999999999999999998765432   33467788999999999


Q ss_pred             HhhhcccHHHHHHHHhccC--------CccHHHHHHHHHHhhchhhhhcccccccC
Q psy16338        251 TTLITNPLDTIRARLQVQR--------TNSMLQTCKLLWIEEGFWMFSKGLSARLV  298 (298)
Q Consensus       251 ~~~it~Pld~vk~r~q~~~--------~~~~~~~~~~i~~~eG~~~ly~G~~~~ll  298 (298)
                      +++++||+||||+|||.+.        |.++.+|+++|++|||++|||||++|+++
T Consensus       222 a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~  277 (292)
T d1okca_         222 AGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVL  277 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHH
T ss_pred             HhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHH
Confidence            9999999999999999975        67999999999999999999999999863



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure