Psyllid ID: psy16373

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160------
Protein Sequence
MNKSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQG
Secondary Structure (PSIPRED)
ccccccccEEEEccccccccccEEEEEEcccccEEEEEEEccccccEEEEEEcccEEEEccccccEEEEEcccccEEEEcccccccEEEEEEcccccEEEEEcccccEEEEEcccccEEEEEccccccEEEEEEcccEEEEEcccccEEEEEcccccEEEEEcccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEccccccEEccEEEEEEccccccEEEEEEccccccEEEEcccccEEEEcccccEEEEEEcccccEEEEEccccccEEEEEEcccccEEEEcccccEEEEEEcccccEEEEEccccccEEEEEEcccEEEEcccccEEEEEEcccccEEEEEcccc
Coil and Loop (DISEMBL)
mnksvhrihlrtgsagslldFKKMQVEEEMTLTCckvestrahhqpitvLECVsnrvitgsqdhtlkvyklEDQQLLFTlhghcgpitTLFIDGvsmmsgsgsqdgllCVWDTVTGACMYSIqahdgcihaltysdsyvislgqderlCVWDRFQGHLLSTIQLQG
Flexible Loop (DISEMBL)
mnksvhrihlrtgsagslldfKKMQVEEEMTLTCCKVestrahhqpitvlECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQG
Low Complexity Region (SEG)
MNKSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQG
Disordered region (IsUnstruct)
****************SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTI****
Disordered Region (DISOPRED)
****VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ*
Disordered Region (DISEMBL)
********HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQG
Disordered Region (DISPRO)
*****HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQ***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNKSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	166	2.2.26 [Sep-21-2011]
A6QM06	1278	Sterol regulatory element	yes	N/A	0.728	0.094	0.491	7e-29
Q5MNU5	1279	Sterol regulatory element	yes	N/A	0.728	0.094	0.491	1e-28
Q12770	1279	Sterol regulatory element	yes	N/A	0.728	0.094	0.483	1e-28
P97260	1276	Sterol regulatory element	yes	N/A	0.728	0.094	0.491	3e-28
A2RRU4	1276	Sterol regulatory element	yes	N/A	0.728	0.094	0.491	4e-28
Q6GQT6	1276	Sterol regulatory element	yes	N/A	0.795	0.103	0.455	7e-28
A0JPH4	1311	Sterol regulatory element	N/A	N/A	0.728	0.092	0.450	5e-24
P90648	732	Myosin heavy chain kinase	yes	N/A	0.686	0.155	0.310	8e-13
Q9VZF4	1326	F-box/WD repeat-containin	no	N/A	0.644	0.080	0.393	9e-13
Q5ZKU8	369	p21-activated protein kin	no	N/A	0.692	0.311	0.322	2e-11

>sp|A6QM06|SCAP_BOVIN Sterol regulatory element-binding protein cleavage-activating protein OS=Bos taurus GN=SCAP PE=2 SV=1

 Score =  126 bits (316), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 42   AHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGS 101
            AH +PIT L+  + R++TGSQDHTL+V++LED   LFTL GH G ITT++ID  +M+  S
Sbjct: 1076 AHQKPITALKAAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYIDQ-TMVLAS 1134

Query: 102  GSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLST 161
            G QDG +C+WD +TG+ +  + AH G + +LT + S VIS G D+ + +WDR  G  L +
Sbjct: 1135 GGQDGAICLWDVLTGSRVSHMFAHRGDVTSLTCTTSCVISSGLDDLISIWDRSTGIKLYS 1194

Query: 162  IQ 163
            IQ
Sbjct: 1195 IQ 1196

Escort protein required for cholesterol as well as lipid homeostasis. Regulates export of the SCAP/SREBF complex from the ER upon low cholesterol. Formation of a ternary complex with INSIG at high sterol concentrations leads to masking of an ER-export signal in SCAP and retention of the complex in the ER. Low sterol concentrations trigger release of INSIG, a conformational change in the SSC domain of SCAP, unmasking of the ER export signal, recruitment into COPII-coated vesicles, transport to the Golgi complex, proteolytic cleavage of SREBF in the Golgi, release of the transcription factor fragment of SREBF from the membrane, its import into the nucleus and up-regulation of LDLR, INSIG1 and the mevalonate pathway.
Bos taurus (taxid: 9913)

>sp|Q5MNU5|SCAP_PIG Sterol regulatory element-binding protein cleavage-activating protein OS=Sus scrofa GN=SCAP PE=2 SV=2

 Score =  125 bits (315), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 42   AHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGS 101
            AH +PIT L+  + R++TGSQDHTL+V++LED   LFTL GH G ITT++ID  +M+  S
Sbjct: 1077 AHQKPITALKAAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYIDQ-TMVLAS 1135

Query: 102  GSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLST 161
            G QDG +C+WD +TG+ +  + AH G + +LT + S VIS G D+ + +WDR  G  L +
Sbjct: 1136 GGQDGAICLWDVLTGSRVSHMFAHRGDVTSLTCTTSCVISSGLDDLISIWDRSTGIKLYS 1195

Query: 162  IQ 163
            IQ
Sbjct: 1196 IQ 1197

Escort protein required for cholesterol as well as lipid homeostasis. Regulates export of the SCAP/SREBF complex from the ER upon low cholesterol. Formation of a ternary complex with INSIG at high sterol concentrations leads to masking of an ER-export signal in SCAP and retention of the complex in the ER. Low sterol concentrations trigger release of INSIG, a conformational change in the SSC domain of SCAP, unmasking of the ER export signal, recruitment into COPII-coated vesicles, transport to the Golgi complex, proteolytic cleavage of SREBF in the Golgi, release of the transcription factor fragment of SREBF from the membrane, its import into the nucleus and up-regulation of LDLR, INSIG1 and the mevalonate pathway.

Sus scrofa (taxid: 9823)

>sp|Q12770|SCAP_HUMAN Sterol regulatory element-binding protein cleavage-activating protein OS=Homo sapiens GN=SCAP PE=1 SV=4

 Score =  125 bits (314), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 42   AHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGS 101
            AH +PIT L+  + R++TGSQDHTL+V++LED   LFTL GH G ITT++ID  +M+  S
Sbjct: 1077 AHQKPITALKAAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYIDQ-TMVLAS 1135

Query: 102  GSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLST 161
            G QDG +C+WD +TG+ +  + AH G + +LT + S VIS G D+ + +WDR  G    +
Sbjct: 1136 GGQDGAICLWDVLTGSRVSHVFAHRGDVTSLTCTTSCVISSGLDDLISIWDRSTGIKFYS 1195

Query: 162  IQ 163
            IQ
Sbjct: 1196 IQ 1197

Escort protein required for cholesterol as well as lipid homeostasis. Regulates export of the SCAP/SREBF complex from the ER upon low cholesterol. Formation of a ternary complex with INSIG at high sterol concentrations leads to masking of an ER-export signal in SCAP and retention of the complex in the ER. Low sterol concentrations trigger release of INSIG, a conformational change in the SSC domain of SCAP, unmasking of the ER export signal, recruitment into COPII-coated vesicles, transport to the Golgi complex, proteolytic cleavage of SREBF in the Golgi, release of the transcription factor fragment of SREBF from the membrane, its import into the nucleus and up-regulation of LDLR, INSIG1 and the mevalonate pathway.

Homo sapiens (taxid: 9606)

>sp|P97260|SCAP_CRIGR Sterol regulatory element-binding protein cleavage-activating protein OS=Cricetulus griseus GN=SCAP PE=1 SV=1

 Score =  124 bits (311), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 42   AHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGS 101
            AH +PIT L   + R++TGSQDHTL+V++LED   LFTL GH G ITT++ID  +M+  S
Sbjct: 1074 AHQKPITALRAAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYIDQ-TMVLAS 1132

Query: 102  GSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLST 161
            G QDG +C+WD +TG+ +    AH G + +LT + S VIS G D+ + +WDR  G  L +
Sbjct: 1133 GGQDGAICLWDVLTGSRVSHTFAHRGDVTSLTCTTSCVISSGLDDLINIWDRSTGIKLYS 1192

Query: 162  IQ 163
            IQ
Sbjct: 1193 IQ 1194

Escort protein required for cholesterol as well as lipid homeostasis. Regulates export of the SCAP/SREBF complex from the ER upon low cholesterol. Formation of a ternary complex with INSIG at high sterol concentrations leads to masking of an ER-export signal in SCAP and retention of the complex in the ER. Low sterol concentrations trigger release of INSIG, a conformational change in the SSC domain of SCAP, unmasking of the ER export signal, recruitment into COPII-coated vesicles, transport to the Golgi complex, proteolytic cleavage of SREBF in the Golgi, release of the transcription factor fragment of SREBF from the membrane, its import into the nucleus and up-regulation of LDLR, INSIG1 and the mevalonate pathway.

Cricetulus griseus (taxid: 10029)

>sp|A2RRU4|SCAP_RAT Sterol regulatory element-binding protein cleavage-activating protein OS=Rattus norvegicus GN=Scap PE=2 SV=1

 Score =  123 bits (309), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 42   AHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGS 101
            AH +PIT L   + R++TGSQDHTL+V++LED   LFTL GH G ITT++ID  +M+  S
Sbjct: 1074 AHQKPITALRAAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYIDQ-TMVLAS 1132

Query: 102  GSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLST 161
            G QDG +C+WD +TG+ +    AH G + +LT + S VIS G D+ + +WDR  G  L +
Sbjct: 1133 GGQDGAICLWDVLTGSRVSHTFAHRGDVTSLTCTTSCVISSGLDDFINIWDRSTGIKLYS 1192

Query: 162  IQ 163
            IQ
Sbjct: 1193 IQ 1194

Escort protein required for cholesterol as well as lipid homeostasis. Regulates export of the SCAP/SREBF complex from the ER upon low cholesterol. Formation of a ternary complex with INSIG at high sterol concentrations leads to masking of an ER-export signal in SCAP and retention of the complex in the ER. Low sterol concentrations trigger release of INSIG, a conformational change in the SSC domain of SCAP, unmasking of the ER export signal, recruitment into COPII-coated vesicles, transport to the Golgi complex, proteolytic cleavage of SREBF in the Golgi, release of the transcription factor fragment of SREBF from the membrane, its import into the nucleus and up-regulation of LDLR, INSIG1 and the mevalonate pathway.

Rattus norvegicus (taxid: 10116)

>sp|Q6GQT6|SCAP_MOUSE Sterol regulatory element-binding protein cleavage-activating protein OS=Mus musculus GN=Scap PE=1 SV=1

 Score =  122 bits (307), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 61/134 (45%), Positives = 88/134 (65%), Gaps = 2/134 (1%)

Query: 31   TLTCCKVESTR-AHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITT 89
            T+TC +  +   AH +PIT L   + R++TGSQDHTL+V++L+D   LFTL GH G IT 
Sbjct: 1062 TVTCHRTHTVPCAHQKPITALRAAAGRLVTGSQDHTLRVFRLDDSCCLFTLKGHSGAITA 1121

Query: 90   LFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLC 149
            ++ID  +M+  SG QDG +C+WD +TG+ +    AH G + +LT + S VIS G D+ + 
Sbjct: 1122 VYIDQ-TMVLASGGQDGAICLWDVLTGSRVSQTFAHRGDVTSLTCTASCVISSGLDDFIS 1180

Query: 150  VWDRFQGHLLSTIQ 163
            +WDR  G  L +IQ
Sbjct: 1181 IWDRSTGIKLYSIQ 1194

Escort protein required for cholesterol as well as lipid homeostasis. Regulates export of the SCAP/SREBF complex from the ER upon low cholesterol. Formation of a ternary complex with INSIG at high sterol concentrations leads to masking of an ER-export signal in SCAP and retention of the complex in the ER. Low sterol concentrations trigger release of INSIG, a conformational change in the SSC domain of SCAP, unmasking of the ER export signal, recruitment into COPII-coated vesicles, transport to the Golgi complex, proteolytic cleavage of SREBF in the Golgi, release of the transcription factor fragment of SREBF from the membrane, its import into the nucleus and up-regulation of LDLR, INSIG1 and the mevalonate pathway.

Mus musculus (taxid: 10090)

>sp|A0JPH4|SCAP_XENLA Sterol regulatory element-binding protein cleavage-activating protein OS=Xenopus laevis GN=scap PE=2 SV=1

 Score =  110 bits (274), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/122 (45%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 42   AHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGS 101
            AH +PIT L+  + R++TGSQDHT+++Y+LED   LFTL GH G IT ++ID  +M+  S
Sbjct: 1109 AHRKPITALKAAAGRLVTGSQDHTVRIYRLEDACCLFTLQGHSGGITAIYIDE-TMVLAS 1167

Query: 102  GSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLST 161
            G QDG +C+WD +TG+ +  +  H G + +L  + S VIS G D+ + +WDR     L +
Sbjct: 1168 GGQDGAICLWDVLTGSRVSHMFGHRGDVTSLLCTASCVISSGLDDVISIWDRSTAIKLYS 1227

Query: 162  IQ 163
            IQ
Sbjct: 1228 IQ 1229

Escort protein required for cholesterol as well as lipid homeostasis. Regulates export of the scap/srebf complex from the ER upon low cholesterol. Low sterol concentrations trigger a conformational change in the SSC domain of scap, unmasking of the ER export signal, recruitment into COPII-coated vesicles, transport to the Golgi complex, proteolytic cleavage of srebf in the Golgi, release of the transcription factor fragment of srebf from the membrane, its import into the nucleus and up-regulation of ldlr, and the mevalonate pathway.

Xenopus laevis (taxid: 8355)

>sp|P90648|MHCKB_DICDI Myosin heavy chain kinase B OS=Dictyostelium discoideum GN=mhkB PE=2 SV=1

 Score = 73.2 bits (178), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 2/116 (1%)

Query: 37  VESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVS 96
           V++ + H  P+  +      + +GS DH++KV+ L+  + +FTL GH  P+ T+ ++   
Sbjct: 495 VQTLKGHEGPVESICYNDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDKY 554

Query: 97  MMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWD 152
           +   SGS D  + VWD  T  C Y++++H   +  L  S  Y+ S   D+ + VWD
Sbjct: 555 LF--SGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWD 608

Phosphorylates threonine in the C-terminal tail region of myosin II heavy chain. This phosphorylation is critical in regulating the assembly and disassembly of myosin II filament.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 7

>sp|Q9VZF4|FBXW7_DROME F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster GN=ago PE=1 SV=1

 Score = 72.8 bits (177), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 65/117 (55%), Gaps = 10/117 (8%)

Query: 47   ITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSG----SG 102
            IT L+   NR+++GS D+TLKV+   + + L TL GH G + +      S MSG    SG
Sbjct: 998  ITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWS------SQMSGNIIISG 1051

Query: 103  SQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLL 159
            S D  L VWD  +GAC++++Q H   +  +    S V+S  +D  L VWD  QG  L
Sbjct: 1052 STDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIEQGSCL 1108

Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Probably recognizes and binds to phosphorylated target proteins (By similarity). Involved in the degradation of cyclin E and dm/Myc. Required for endocycles, but not mitosis in follicle cell epithelium.

Drosophila melanogaster (taxid: 7227)

>sp|Q5ZKU8|PK1IP_CHICK p21-activated protein kinase-interacting protein 1-like OS=Gallus gallus GN=PAK1IP1 PE=2 SV=1

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 3/118 (2%)

Query: 42  AHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGS 101
           AH   ++ +   S  V+TGS+D ++++Y +  +     L  H G IT L   G + +  S
Sbjct: 33  AHTASLSAVAVNSKYVVTGSRDESIQIYDMRKKVEHGALLQHNGTITCLEFYGTAHLL-S 91

Query: 102 GSQDGLLCVWDTVTGACMYSIQAHDGCIHALTY--SDSYVISLGQDERLCVWDRFQGH 157
           G++DGL+C+W+T    C+ SI+AH G + +L+   S    +S+G D+ L  W+  +G 
Sbjct: 92  GAEDGLICIWNTKRWECLKSIKAHKGHVTSLSIHPSGKLALSVGTDKTLRTWNLVEGR 149

Negatively regulates the PAK1 kinase.

Gallus gallus (taxid: 9031)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
345484020	1335	PREDICTED: sterol regulatory element-bin	0.951	0.118	0.681	1e-57
332016798	1437	Sterol regulatory element-binding protei	0.945	0.109	0.689	8e-56
91083033	1236	PREDICTED: similar to sterol regulatory	0.939	0.126	0.647	1e-55
242016109	1357	sterol regulatory element binding protei	0.951	0.116	0.635	3e-55
350411518	1328	PREDICTED: sterol regulatory element-bin	0.927	0.115	0.696	2e-54
340729793	1328	PREDICTED: sterol regulatory element-bin	0.927	0.115	0.689	4e-54
380020480	1328	PREDICTED: LOW QUALITY PROTEIN: sterol r	0.945	0.118	0.670	9e-54
66555130	1329	PREDICTED: sterol regulatory element-bin	0.945	0.118	0.670	1e-53
383854002	1322	PREDICTED: sterol regulatory element-bin	0.927	0.116	0.668	2e-53
307176943	1321	Sterol regulatory element-binding protei	0.945	0.118	0.670	3e-53

>gi|345484020|ref|XP_003424927.1| PREDICTED: sterol regulatory element-binding protein cleavage-activating protein-like [Nasonia vitripennis]

 Score =  227 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 109/160 (68%), Positives = 123/160 (76%), Gaps = 2/160 (1%)

Query: 4    SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQD 63
            S  R H+RTGSAGS +DF  +   EE  L C K+ S RAH Q ITVL+    RV+TGSQD
Sbjct: 1094 SYRRTHVRTGSAGSPMDFNNIMHSEE-DLRCMKIGSHRAHQQAITVLDSEGGRVLTGSQD 1152

Query: 64   HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSI 122
            HTLKVY+LEDQ  L+TLHGHCGPIT LFID VS M SGSGSQDGLLCVWD  TG CMYSI
Sbjct: 1153 HTLKVYRLEDQMPLYTLHGHCGPITCLFIDRVSPMTSGSGSQDGLLCVWDLSTGTCMYSI 1212

Query: 123  QAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTI 162
            QAHDG + A+T S SYVIS+G DE+LCVW+RFQGHLL  +
Sbjct: 1213 QAHDGAVAAITCSASYVISIGADEKLCVWERFQGHLLHAL 1252

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332016798|gb|EGI57619.1| Sterol regulatory element-binding protein cleavage-activating protein [Acromyrmex echinatior]

 Score =  221 bits (563), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 111/161 (68%), Positives = 127/161 (78%), Gaps = 4/161 (2%)

Query: 4    SVHRIHLRTGSAGSLLDFKK-MQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQ 62
            S  R H+RTGSAGS +D    MQ EE+  L C K+ S RAH Q ITVL+    RV+TGSQ
Sbjct: 1196 SYRRTHVRTGSAGSPMDLNNYMQTEED--LRCMKIGSHRAHQQAITVLDSEGGRVLTGSQ 1253

Query: 63   DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYS 121
            DHTLKVY+LEDQ  L+TLHGHCGPI+ LFID +S M SGSGSQDGLLCVWD +TGACMYS
Sbjct: 1254 DHTLKVYRLEDQLPLYTLHGHCGPISCLFIDRISPMTSGSGSQDGLLCVWDLLTGACMYS 1313

Query: 122  IQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTI 162
            IQAHDG + A+T S SYVIS+G DERLCVW+RFQGHLL T+
Sbjct: 1314 IQAHDGAVAAITCSVSYVISIGTDERLCVWERFQGHLLHTL 1354

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91083033|ref|XP_974766.1| PREDICTED: similar to sterol regulatory element-binding protein cleavage-activating protein [Tribolium castaneum] gi|270007013|gb|EFA03461.1| hypothetical protein TcasGA2_TC013456 [Tribolium castaneum]

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 103/159 (64%), Positives = 123/159 (77%), Gaps = 3/159 (1%)

Query: 7    RIHLRTGSAGSLLDFKKM--QVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDH 64
            R H+RTGS GS+ D   +  Q E+E    C KV S +AH QPI  L+C   R++TGSQDH
Sbjct: 997  RTHVRTGSVGSVPDHTNLISQNEDEEDFRCLKVFSVKAHQQPIICLDCEGGRILTGSQDH 1056

Query: 65   TLKVYKLEDQQLLFTLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSIQ 123
            TLKV++LED    +TLHGHCGPIT LFID +S   SGSGSQDG+LCVWD +TGACMY+IQ
Sbjct: 1057 TLKVFRLEDGSPQYTLHGHCGPITCLFIDRISPATSGSGSQDGMLCVWDLLTGACMYNIQ 1116

Query: 124  AHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTI 162
            AHDG I +LTYS SYVISLG D+R+CVW+RFQGHLL+TI
Sbjct: 1117 AHDGTITSLTYSASYVISLGSDDRICVWERFQGHLLNTI 1155

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242016109|ref|XP_002428678.1| sterol regulatory element binding protein cleavage-activating protein, putative [Pediculus humanus corporis] gi|212513349|gb|EEB15940.1| sterol regulatory element binding protein cleavage-activating protein, putative [Pediculus humanus corporis]

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 103/162 (63%), Positives = 126/162 (77%), Gaps = 4/162 (2%)

Query: 4    SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQD 63
            S  R H+RTGSAGS L+ +K   E      C K+ S +AH QPITVL+C S R++TGSQD
Sbjct: 1119 SNRRTHIRTGSAGSALELEKNCYE---NFKCRKLSSVKAHQQPITVLDCESGRIVTGSQD 1175

Query: 64   HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSI 122
            HTLKV++L+D  L +TLHGHCGPIT +FID V+  +SGSGS DGLLC WD +TGAC+YSI
Sbjct: 1176 HTLKVFRLKDISLQYTLHGHCGPITCMFIDKVAPFLSGSGSHDGLLCFWDLLTGACLYSI 1235

Query: 123  QAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL 164
            QAHDG I ALTYS SYVISLG D+++CVW+RF GHLL+TI +
Sbjct: 1236 QAHDGSICALTYSASYVISLGTDDKICVWERFLGHLLNTINV 1277

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350411518|ref|XP_003489375.1| PREDICTED: sterol regulatory element-binding protein cleavage-activating protein-like [Bombus impatiens]

 Score =  217 bits (552), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 110/158 (69%), Positives = 124/158 (78%), Gaps = 4/158 (2%)

Query: 4    SVHRIHLRTGSAGSLLDFKK-MQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQ 62
            S  R H+RTGSAGS +D    MQ EE+  L C K+ S +AH Q ITVL+    RV+TGSQ
Sbjct: 1087 SYRRTHVRTGSAGSPMDINNIMQSEED--LRCMKISSHKAHQQAITVLDSEGGRVLTGSQ 1144

Query: 63   DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYS 121
            DHTLKVY+LEDQ  L+TLHGHCGPI+ LFID VS M SGSGSQDGLLCVWD +TG CMYS
Sbjct: 1145 DHTLKVYRLEDQLPLYTLHGHCGPISCLFIDRVSPMTSGSGSQDGLLCVWDLLTGTCMYS 1204

Query: 122  IQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLL 159
            IQAHDG I A+T S SYVIS+G DERLCVW+RFQGHLL
Sbjct: 1205 IQAHDGAIAAITCSVSYVISIGTDERLCVWERFQGHLL 1242

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340729793|ref|XP_003403180.1| PREDICTED: sterol regulatory element-binding protein cleavage-activating protein-like [Bombus terrestris]

 Score =  216 bits (549), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 109/158 (68%), Positives = 124/158 (78%), Gaps = 4/158 (2%)

Query: 4    SVHRIHLRTGSAGSLLDFKK-MQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQ 62
            S  R H+RTGSAGS +D    MQ EE+  L C K+ S +AH Q ITVL+    RV+TGSQ
Sbjct: 1087 SYRRTHVRTGSAGSPMDINNIMQSEED--LRCMKISSHKAHQQAITVLDSEGGRVLTGSQ 1144

Query: 63   DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYS 121
            DHTLKVY+LEDQ  L+TLHGHCGPI+ LFID VS M SGSGSQDGLLCVWD +TG CMYS
Sbjct: 1145 DHTLKVYRLEDQLPLYTLHGHCGPISCLFIDRVSPMTSGSGSQDGLLCVWDLLTGTCMYS 1204

Query: 122  IQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLL 159
            IQAHDG I A+T S SYVIS+G DE+LCVW+RFQGHLL
Sbjct: 1205 IQAHDGAIAAITCSVSYVISIGTDEKLCVWERFQGHLL 1242

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380020480|ref|XP_003694111.1| PREDICTED: LOW QUALITY PROTEIN: sterol regulatory element-binding protein cleavage-activating protein-like [Apis florea]

 Score =  214 bits (545), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 108/161 (67%), Positives = 125/161 (77%), Gaps = 4/161 (2%)

Query: 4    SVHRIHLRTGSAGSLLDFKK-MQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQ 62
            S  R H+RTGSAGS +D    MQ EE+  L C K+ S +AH Q ITVL+    RV+TGSQ
Sbjct: 1087 SYRRTHVRTGSAGSPMDINNIMQSEED--LRCMKIGSHKAHQQAITVLDSEGGRVLTGSQ 1144

Query: 63   DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYS 121
            DHTLKVY+LEDQ  L+TLHGHCGPI+ LFID +S M SGSGSQDGLLCVWD +TG CMYS
Sbjct: 1145 DHTLKVYRLEDQLPLYTLHGHCGPISCLFIDRMSPMTSGSGSQDGLLCVWDLLTGTCMYS 1204

Query: 122  IQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTI 162
            IQAHDG + A+  S SYVIS+G DERLCVW+RFQGHLL T+
Sbjct: 1205 IQAHDGAVAAMACSVSYVISIGTDERLCVWERFQGHLLHTL 1245

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66555130|ref|XP_394934.2| PREDICTED: sterol regulatory element-binding protein cleavage-activating protein-like [Apis mellifera]

 Score =  214 bits (545), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 108/161 (67%), Positives = 125/161 (77%), Gaps = 4/161 (2%)

Query: 4    SVHRIHLRTGSAGSLLDFKK-MQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQ 62
            S  R H+RTGSAGS +D    MQ EE+  L C K+ S +AH Q ITVL+    RV+TGSQ
Sbjct: 1088 SYRRTHVRTGSAGSPMDINNIMQSEED--LRCMKIGSHKAHQQAITVLDSEGGRVLTGSQ 1145

Query: 63   DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYS 121
            DHTLKVY+LEDQ  L+TLHGHCGPI+ LFID +S M SGSGSQDGLLCVWD +TG CMYS
Sbjct: 1146 DHTLKVYRLEDQLPLYTLHGHCGPISCLFIDRMSPMTSGSGSQDGLLCVWDLLTGTCMYS 1205

Query: 122  IQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTI 162
            IQAHDG + A+  S SYVIS+G DERLCVW+RFQGHLL T+
Sbjct: 1206 IQAHDGAVAAMACSVSYVISIGTDERLCVWERFQGHLLHTL 1246

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383854002|ref|XP_003702511.1| PREDICTED: sterol regulatory element-binding protein cleavage-activating protein-like [Megachile rotundata]

 Score =  213 bits (543), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 105/157 (66%), Positives = 122/157 (77%), Gaps = 3/157 (1%)

Query: 4    SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQD 63
            S  R H+RTGSAGS +D   +   E+  L C K+ S +AH Q ITVL+    RV+TGSQD
Sbjct: 1082 SYRRTHVRTGSAGSPMDINNIMQPED--LRCMKISSHKAHQQAITVLDSEGGRVLTGSQD 1139

Query: 64   HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSI 122
            HTLKVY+LEDQ  L+TLHGHCGPI+ LFID +S M SGSGSQDGLLCVWD +TG CMYSI
Sbjct: 1140 HTLKVYRLEDQLPLYTLHGHCGPISCLFIDRMSPMTSGSGSQDGLLCVWDLLTGTCMYSI 1199

Query: 123  QAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLL 159
            QAHDG + A+T S SYVIS+G DERLCVW+RFQGHLL
Sbjct: 1200 QAHDGAVAAITCSVSYVISIGTDERLCVWERFQGHLL 1236

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307176943|gb|EFN66249.1| Sterol regulatory element-binding protein cleavage-activating protein [Camponotus floridanus]

 Score =  213 bits (541), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 108/161 (67%), Positives = 123/161 (76%), Gaps = 4/161 (2%)

Query: 4    SVHRIHLRTGSAGSLLDFKK-MQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQ 62
            S  R H+RTGSAGS +D    M  EE+  L C K+ S RAH Q ITVL+    RV+TGSQ
Sbjct: 1080 SYRRTHVRTGSAGSPMDLNNSMHTEED--LRCMKIGSHRAHQQAITVLDSEGGRVLTGSQ 1137

Query: 63   DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYS 121
            DHTLKVY+LEDQ  L+TLHGHCGPI+ LFID  S M SGSGSQDGLLCVWD +TG CMYS
Sbjct: 1138 DHTLKVYRLEDQLPLYTLHGHCGPISCLFIDRFSPMTSGSGSQDGLLCVWDLLTGTCMYS 1197

Query: 122  IQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTI 162
            IQAH G + A+T S SYVIS+G DERLCVW+RFQGHLL T+
Sbjct: 1198 IQAHAGAVAAITCSVSYVISIGTDERLCVWERFQGHLLHTL 1238

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
FB|FBgn0033052	1276	SCAP "SCAP" [Drosophila melano	0.933	0.121	0.570	5.9e-43
ZFIN|ZDB-GENE-040107-41	1252	scap "SREBF chaperone" [Danio	0.807	0.107	0.463	9.7e-27
UNIPROTKB|F1PI33	1278	SCAP "Uncharacterized protein"	0.771	0.100	0.473	2.7e-26
UNIPROTKB|A6QM06	1278	SCAP "Sterol regulatory elemen	0.728	0.094	0.491	3.4e-26
UNIPROTKB|F1MQ33	1278	SCAP "Sterol regulatory elemen	0.728	0.094	0.491	3.4e-26
UNIPROTKB|Q5MNU5	1279	SCAP "Sterol regulatory elemen	0.728	0.094	0.491	3.4e-26
UNIPROTKB|F1SNT3	1280	SCAP "Sterol regulatory elemen	0.728	0.094	0.491	3.4e-26
UNIPROTKB|F8W921	1023	SCAP "Sterol regulatory elemen	0.728	0.118	0.483	3.9e-26
UNIPROTKB|Q12770	1279	SCAP "Sterol regulatory elemen	0.728	0.094	0.483	5.6e-26
MGI|MGI:2135958	1276	Scap "SREBF chaperone" [Mus mu	0.795	0.103	0.455	9.1e-26

FB|FBgn0033052 SCAP "SCAP" [Drosophila melanogaster (taxid:7227)]

 Score = 466 (169.1 bits), Expect = 5.9e-43, P = 5.9e-43
 Identities = 97/170 (57%), Positives = 118/170 (69%)

Query:     7 RIHLRTGSAGSL---LDFKKMQVE-------EEMTLTCCKVESTR-AHHQPITVLECVSN 55
             R H+RTGS GSL   L  ++ Q E       EEM +T   +E  R AH QPIT ++ V++
Sbjct:  1031 RTHVRTGSTGSLGLMLQQQRCQQEASQKTTKEEMKIT---LEGVRLAHQQPITCMQVVND 1087

Query:    56 RVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSM-MSGSGSQDGLLCVWDTV 114
              V TGSQDHTLKVY L    + +TLHGHCGP+T LF+D       GSGSQDGLLCVWD  
Sbjct:  1088 MVFTGSQDHTLKVYCLNKSDVEYTLHGHCGPVTCLFVDRWQPGTGGSGSQDGLLCVWDLF 1147

Query:   115 TGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL 164
             TGACMY+IQAHDG +  L  + SYVISLG DER+CVW+RFQG+LL+TI +
Sbjct:  1148 TGACMYNIQAHDGAVSCLACAPSYVISLGTDERICVWERFQGNLLTTINI 1197

GO:0000042 "protein targeting to Golgi" evidence=NAS

GO:0035103 "sterol regulatory element binding protein cleavage" evidence=NAS

GO:0016485 "protein processing" evidence=NAS

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-040107-41 scap "SREBF chaperone" [Danio rerio (taxid:7955)]

 Score = 314 (115.6 bits), Expect = 9.7e-27, P = 9.7e-27
 Identities = 64/138 (46%), Positives = 89/138 (64%)

Query:    29 EMTLTCCKVESTR-AHHQPITVLECVSNRVITGSQDHTLK--VYKLEDQQLLFTLHGHCG 85
             E  ++C    S + AH +PITVL+  + RV+TGSQDH LK  VY+LED   LFTL GH G
Sbjct:  1034 EDVISCHLTRSVQCAHQKPITVLKAAAGRVVTGSQDHNLKSKVYRLEDSCCLFTLQGHSG 1093

Query:    86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQD 145
              IT ++ID  +M+  SG QDG +CVWD +TG+ +  +  H G + +L  + S +IS G D
Sbjct:  1094 GITAIYIDQ-TMVLASGGQDGAICVWDVLTGSRVSHVYGHRGDVTSLVCTTSCIISSGLD 1152

Query:   146 ERLCVWDRFQGHLLSTIQ 163
             + +C+WDR  G  L +IQ
Sbjct:  1153 DLICIWDRSTGIKLYSIQ 1170

GO:0016021 "integral to membrane" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IMP

GO:0019915 "lipid storage" evidence=IMP

UNIPROTKB|F1PI33 SCAP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 310 (114.2 bits), Expect = 2.7e-26, P = 2.7e-26
 Identities = 62/131 (47%), Positives = 89/131 (67%)

Query:    35 CKVESTR--AHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFI 92
             C++  T   AH +PIT L+  + R++TGSQDHTL+V++LED   LFTL GH G ITT++I
Sbjct:  1067 CRLTHTVPCAHQKPITALKAAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYI 1126

Query:    93 DGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWD 152
             D  +M+  SG QDG +C+WD +TG+ +  + AH G + +LT + S VIS G D+ + +WD
Sbjct:  1127 DQ-TMVLASGGQDGAICLWDVLTGSRVSHMFAHRGDVTSLTCTTSCVISSGLDDLISIWD 1185

Query:   153 RFQGHLLSTIQ 163
             R  G  L +IQ
Sbjct:  1186 RSTGIKLYSIQ 1196

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|A6QM06 SCAP "Sterol regulatory element-binding protein cleavage-activating protein" [Bos taurus (taxid:9913)]

 Score = 309 (113.8 bits), Expect = 3.4e-26, P = 3.4e-26
 Identities = 60/122 (49%), Positives = 85/122 (69%)

Query:    42 AHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGS 101
             AH +PIT L+  + R++TGSQDHTL+V++LED   LFTL GH G ITT++ID  +M+  S
Sbjct:  1076 AHQKPITALKAAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYIDQ-TMVLAS 1134

Query:   102 GSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLST 161
             G QDG +C+WD +TG+ +  + AH G + +LT + S VIS G D+ + +WDR  G  L +
Sbjct:  1135 GGQDGAICLWDVLTGSRVSHMFAHRGDVTSLTCTTSCVISSGLDDLISIWDRSTGIKLYS 1194

Query:   162 IQ 163
             IQ
Sbjct:  1195 IQ 1196

GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008203 "cholesterol metabolic process" evidence=IEA

UNIPROTKB|F1MQ33 SCAP "Sterol regulatory element-binding protein cleavage-activating protein" [Bos taurus (taxid:9913)]

 Score = 309 (113.8 bits), Expect = 3.4e-26, P = 3.4e-26
 Identities = 60/122 (49%), Positives = 85/122 (69%)

Query:    42 AHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGS 101
             AH +PIT L+  + R++TGSQDHTL+V++LED   LFTL GH G ITT++ID  +M+  S
Sbjct:  1076 AHQKPITALKAAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYIDQ-TMVLAS 1134

Query:   102 GSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLST 161
             G QDG +C+WD +TG+ +  + AH G + +LT + S VIS G D+ + +WDR  G  L +
Sbjct:  1135 GGQDGAICLWDVLTGSRVSHMFAHRGDVTSLTCTTSCVISSGLDDLISIWDRSTGIKLYS 1194

Query:   162 IQ 163
             IQ
Sbjct:  1195 IQ 1196

GO:0045540 "regulation of cholesterol biosynthetic process" evidence=IEA

GO:0042304 "regulation of fatty acid biosynthetic process" evidence=IEA

GO:0032933 "SREBP signaling pathway" evidence=IEA

GO:0032868 "response to insulin stimulus" evidence=IEA

GO:0008203 "cholesterol metabolic process" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0001666 "response to hypoxia" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5MNU5 SCAP "Sterol regulatory element-binding protein cleavage-activating protein" [Sus scrofa (taxid:9823)]

 Score = 309 (113.8 bits), Expect = 3.4e-26, P = 3.4e-26
 Identities = 60/122 (49%), Positives = 85/122 (69%)

Query:    42 AHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGS 101
             AH +PIT L+  + R++TGSQDHTL+V++LED   LFTL GH G ITT++ID  +M+  S
Sbjct:  1077 AHQKPITALKAAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYIDQ-TMVLAS 1135

Query:   102 GSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLST 161
             G QDG +C+WD +TG+ +  + AH G + +LT + S VIS G D+ + +WDR  G  L +
Sbjct:  1136 GGQDGAICLWDVLTGSRVSHMFAHRGDVTSLTCTTSCVISSGLDDLISIWDRSTGIKLYS 1195

Query:   162 IQ 163
             IQ
Sbjct:  1196 IQ 1197

GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008203 "cholesterol metabolic process" evidence=IEA

UNIPROTKB|F1SNT3 SCAP "Sterol regulatory element-binding protein cleavage-activating protein" [Sus scrofa (taxid:9823)]

 Score = 309 (113.8 bits), Expect = 3.4e-26, P = 3.4e-26
 Identities = 60/122 (49%), Positives = 85/122 (69%)

Query:    42 AHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGS 101
             AH +PIT L+  + R++TGSQDHTL+V++LED   LFTL GH G ITT++ID  +M+  S
Sbjct:  1078 AHQKPITALKAAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYIDQ-TMVLAS 1136

Query:   102 GSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLST 161
             G QDG +C+WD +TG+ +  + AH G + +LT + S VIS G D+ + +WDR  G  L +
Sbjct:  1137 GGQDGAICLWDVLTGSRVSHMFAHRGDVTSLTCTTSCVISSGLDDLISIWDRSTGIKLYS 1196

Query:   162 IQ 163
             IQ
Sbjct:  1197 IQ 1198

GO:0045540 "regulation of cholesterol biosynthetic process" evidence=IEA

GO:0042304 "regulation of fatty acid biosynthetic process" evidence=IEA

GO:0032933 "SREBP signaling pathway" evidence=IEA

GO:0032868 "response to insulin stimulus" evidence=IEA

GO:0008203 "cholesterol metabolic process" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0001666 "response to hypoxia" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F8W921 SCAP "Sterol regulatory element-binding protein cleavage-activating protein" [Homo sapiens (taxid:9606)]

 Score = 307 (113.1 bits), Expect = 3.9e-26, P = 3.9e-26
 Identities = 59/122 (48%), Positives = 84/122 (68%)

Query:    42 AHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGS 101
             AH +PIT L+  + R++TGSQDHTL+V++LED   LFTL GH G ITT++ID  +M+  S
Sbjct:   821 AHQKPITALKAAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYIDQ-TMVLAS 879

Query:   102 GSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLST 161
             G QDG +C+WD +TG+ +  + AH G + +LT + S VIS G D+ + +WDR  G    +
Sbjct:   880 GGQDGAICLWDVLTGSRVSHVFAHRGDVTSLTCTTSCVISSGLDDLISIWDRSTGIKFYS 939

Query:   162 IQ 163
             IQ
Sbjct:   940 IQ 941

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q12770 SCAP "Sterol regulatory element-binding protein cleavage-activating protein" [Homo sapiens (taxid:9606)]

 Score = 307 (113.1 bits), Expect = 5.6e-26, P = 5.6e-26
 Identities = 59/122 (48%), Positives = 84/122 (68%)

Query:    42 AHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGS 101
             AH +PIT L+  + R++TGSQDHTL+V++LED   LFTL GH G ITT++ID  +M+  S
Sbjct:  1077 AHQKPITALKAAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYIDQ-TMVLAS 1135

Query:   102 GSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLST 161
             G QDG +C+WD +TG+ +  + AH G + +LT + S VIS G D+ + +WDR  G    +
Sbjct:  1136 GGQDGAICLWDVLTGSRVSHVFAHRGDVTSLTCTTSCVISSGLDDLISIWDRSTGIKFYS 1195

Query:   162 IQ 163
             IQ
Sbjct:  1196 IQ 1197

GO:0001666 "response to hypoxia" evidence=IEA

GO:0007568 "aging" evidence=IEA

GO:0008203 "cholesterol metabolic process" evidence=IEA

GO:0032403 "protein complex binding" evidence=IEA

GO:0032868 "response to insulin stimulus" evidence=IEA

GO:0042304 "regulation of fatty acid biosynthetic process" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA

GO:0045541 "negative regulation of cholesterol biosynthetic process" evidence=NAS

GO:0005794 "Golgi apparatus" evidence=NAS

GO:0051082 "unfolded protein binding" evidence=NAS

GO:0005783 "endoplasmic reticulum" evidence=NAS

GO:0032933 "SREBP signaling pathway" evidence=IMP

GO:0016021 "integral to membrane" evidence=NAS

GO:0045716 "positive regulation of low-density lipoprotein particle receptor biosynthetic process" evidence=NAS

GO:0005515 "protein binding" evidence=IPI

MGI|MGI:2135958 Scap "SREBF chaperone" [Mus musculus (taxid:10090)]

 Score = 305 (112.4 bits), Expect = 9.1e-26, P = 9.1e-26
 Identities = 61/134 (45%), Positives = 88/134 (65%)

Query:    31 TLTCCKVESTR-AHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITT 89
             T+TC +  +   AH +PIT L   + R++TGSQDHTL+V++L+D   LFTL GH G IT 
Sbjct:  1062 TVTCHRTHTVPCAHQKPITALRAAAGRLVTGSQDHTLRVFRLDDSCCLFTLKGHSGAITA 1121

Query:    90 LFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLC 149
             ++ID  +M+  SG QDG +C+WD +TG+ +    AH G + +LT + S VIS G D+ + 
Sbjct:  1122 VYIDQ-TMVLASGGQDGAICLWDVLTGSRVSQTFAHRGDVTSLTCTASCVISSGLDDFIS 1180

Query:   150 VWDRFQGHLLSTIQ 163
             +WDR  G  L +IQ
Sbjct:  1181 IWDRSTGIKLYSIQ 1194

GO:0001666 "response to hypoxia" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008202 "steroid metabolic process" evidence=IEA

GO:0008203 "cholesterol metabolic process" evidence=IDA

GO:0015485 "cholesterol binding" evidence=TAS

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0019217 "regulation of fatty acid metabolic process" evidence=IDA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0032403 "protein complex binding" evidence=ISO

GO:0032868 "response to insulin stimulus" evidence=IMP

GO:0032933 "SREBP signaling pathway" evidence=ISO

GO:0042304 "regulation of fatty acid biosynthetic process" evidence=IMP

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0043234 "protein complex" evidence=ISO

GO:0045540 "regulation of cholesterol biosynthetic process" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	166
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-15
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-15
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-13
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-13
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-13
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	3e-12
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	3e-09
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	7e-08
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-07
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	5e-07
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.002
smart00320	40	smart00320, WD40, WD40 repeats	0.002

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 71.2 bits (175), Expect = 2e-15
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 2/101 (1%)

Query: 54  SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT 113
             ++++ S D T+K++ L   + L TL GH   + ++       +  SGS+DG + VWD 
Sbjct: 189 GEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDL 248

Query: 114 VTGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWD 152
            TG C+ ++  H   + +L +S     + S   D  + +WD
Sbjct: 249 RTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 70.8 bits (174), Expect = 3e-15
 Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 4/127 (3%)

Query: 41  RAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMM 98
           + H   +T +        + TGS D T+KV+ LE  +LL TL GH GP+  +        
Sbjct: 6   KGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTY 65

Query: 99  SGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQG 156
             SGS D  + +WD  TG C+ ++  H   + ++ +S     + S  +D+ + VWD   G
Sbjct: 66  LASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETG 125

Query: 157 HLLSTIQ 163
             L+T++
Sbjct: 126 KCLTTLR 132

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 66.2 bits (162), Expect = 1e-13
 Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 57  VITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG 116
           + + S+D T+KV+ +E  + L TL GH   + ++          S SQDG + +WD  TG
Sbjct: 108 LSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTG 167

Query: 117 ACMYSIQAHDGCIHALTYSDSY--VISLGQDERLCVWDRFQGHLLSTIQ 163
            C+ ++  H G ++++ +S     ++S   D  + +WD   G  L T++
Sbjct: 168 KCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLR 216

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 66.2 bits (162), Expect = 1e-13
 Identities = 32/111 (28%), Positives = 60/111 (54%), Gaps = 6/111 (5%)

Query: 57  VITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTL--FIDGVSMMSGSGSQDGLLCVWDTV 114
           V + SQD T+K++ L   + + TL GH G + ++    DG  ++S S   DG + +WD  
Sbjct: 150 VASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSS--DGTIKLWDLS 207

Query: 115 TGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLSTIQ 163
           TG C+ +++ H+  ++++ +S     + S  +D  + VWD   G  + T+ 
Sbjct: 208 TGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLS 258

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 65.0 bits (159), Expect = 3e-13
 Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 14/128 (10%)

Query: 43  HHQPITVLECV--SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTL-FIDGVSMMS 99
           H  P+  +        + +GS D T++++ LE  + + TL GH   ++++ F     ++S
Sbjct: 50  HTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILS 109

Query: 100 GSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYS--DSYVISLGQDERLCVWD----- 152
            S S+D  + VWD  TG C+ +++ H   ++++ +S   ++V S  QD  + +WD     
Sbjct: 110 SS-SRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGK 168

Query: 153 ---RFQGH 157
                 GH
Sbjct: 169 CVATLTGH 176

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 63.2 bits (152), Expect = 3e-12
 Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 6/115 (5%)

Query: 54  SNRVITGSQDHTLKVYKLE-DQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWD 112
            + + +GS D T++++ L     LL TL GH   + ++       +  SGS DG + +WD
Sbjct: 253 GSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWD 312

Query: 113 TVTGAC--MYSIQAHDGCIHALTYSDS---YVISLGQDERLCVWDRFQGHLLSTI 162
             TG      +++ H+G + +L++S      V     D  + +WD   G  L T+
Sbjct: 313 LETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTL 367

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 54.7 bits (130), Expect = 3e-09
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 6/124 (4%)

Query: 35  CKVESTRAHHQPITVLECVSN---RVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTL- 90
             + +   H + +T L    +        S D T+K++ L   + L TL GH  P+++L 
Sbjct: 146 KLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLA 205

Query: 91  FIDGVSMMSGSGSQDGLLCVWDTVTGACMYS-IQAH-DGCIHALTYSDSYVISLGQDERL 148
           F     ++  SGS DG + +WD  TG  + S +  H D  + + +   S + S   D  +
Sbjct: 206 FSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTI 265

Query: 149 CVWD 152
            +WD
Sbjct: 266 RLWD 269

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 50.0 bits (120), Expect = 7e-08
 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 2/89 (2%)

Query: 76  LLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYS 135
           L  TL GH G +T +       +  +GS DG + VWD  TG  + +++ H G +  +  S
Sbjct: 1   LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAAS 60

Query: 136 --DSYVISLGQDERLCVWDRFQGHLLSTI 162
              +Y+ S   D+ + +WD   G  + T+
Sbjct: 61  ADGTYLASGSSDKTIRLWDLETGECVRTL 89

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 48.9 bits (115), Expect = 2e-07
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 6/124 (4%)

Query: 35  CKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLE--DQQLLFTLHGHCGPITTL 90
             + +   H   +  +        + +GS D T++++ LE        TL GH GP+++L
Sbjct: 275 SLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSL 334

Query: 91  -FIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLG-QDERL 148
            F    S++   GS DG + +WD  TG  + +++ H   +      D  V+S G  D  +
Sbjct: 335 SFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTV 394

Query: 149 CVWD 152
            +WD
Sbjct: 395 RLWD 398

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 48.2 bits (113), Expect = 5e-07
 Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 5/110 (4%)

Query: 57  VITGSQDHTLKVYKLEDQ-QLLFTLHGHCGPITTL-FIDGVSMMSGSGSQDGLLCVWDTV 114
           + + S D T+K++ L    +L+ TL GH   +T+L F     +++   S DG + +WD  
Sbjct: 127 LASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLR 186

Query: 115 TGACMYSIQAHDGCIHALTYS---DSYVISLGQDERLCVWDRFQGHLLST 161
           TG  + ++  H   + +L +S      + S   D  + +WD   G LL +
Sbjct: 187 TGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRS 236

Length = 466

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 34.3 bits (79), Expect = 0.002
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 75  QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWD 112
           +LL TL GH GP+T++       +  SGS DG + VWD
Sbjct: 2   KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 34.2 bits (79), Expect = 0.002
 Identities = 16/40 (40%), Positives = 22/40 (55%)

Query: 73  DQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWD 112
             +LL TL GH GP+T++          SGS DG + +WD
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	166
KOG0271|consensus	480		99.97
KOG0272|consensus	459		99.97
KOG0263|consensus	707		99.96
KOG0286|consensus	343		99.96
KOG0272|consensus	459		99.96
KOG0263|consensus	707		99.96
KOG0271|consensus	480		99.96
KOG0285|consensus	460		99.95
KOG0276|consensus	794		99.95
KOG0284|consensus	464		99.95
KOG0266|consensus	456		99.95
KOG0279|consensus	315		99.94
KOG0266|consensus	456		99.94
KOG0279|consensus	315		99.94
KOG0319|consensus	775		99.94
KOG0275|consensus	508		99.94
KOG0281|consensus	499		99.94
KOG0273|consensus	524		99.94
KOG0273|consensus	524		99.94
PTZ00421	493	coronin; Provisional	99.93
KOG0284|consensus	464		99.93
PTZ00421	493	coronin; Provisional	99.93
KOG0281|consensus	499		99.93
KOG0295|consensus	406		99.93
KOG0277|consensus	311		99.93
KOG0264|consensus	422		99.93
KOG0286|consensus	343		99.93
KOG0316|consensus	307		99.93
KOG0265|consensus	338		99.93
KOG0319|consensus	775		99.92
KOG0315|consensus	311		99.92
KOG0313|consensus	423		99.92
PTZ00420	568	coronin; Provisional	99.92
KOG0276|consensus	794		99.92
KOG0285|consensus	460		99.92
KOG0291|consensus	893		99.92
KOG0645|consensus	312		99.91
KOG0316|consensus	307		99.91
KOG0274|consensus	537		99.91
KOG0315|consensus	311		99.91
PTZ00420	568	coronin; Provisional	99.91
KOG0269|consensus	839		99.91
KOG0295|consensus	406		99.91
KOG0318|consensus	603		99.91
KOG0291|consensus	893		99.91
KOG0645|consensus	312		99.91
KOG0318|consensus	603		99.91
KOG0302|consensus	440		99.9
KOG0292|consensus	1202		99.9
KOG0277|consensus	311		99.9
KOG0274|consensus	537		99.9
KOG0294|consensus	362		99.9
KOG0296|consensus	399		99.9
KOG0283|consensus	712		99.9
KOG0310|consensus	487		99.9
KOG0289|consensus	506		99.9
KOG0305|consensus	484		99.89
KOG0308|consensus	735		99.89
KOG0282|consensus	503		99.89
KOG0292|consensus	1202		99.89
PLN00181	793	protein SPA1-RELATED; Provisional	99.89
PLN00181	793	protein SPA1-RELATED; Provisional	99.88
KOG0265|consensus	338		99.88
KOG0282|consensus	503		99.88
KOG0294|consensus	362		99.88
KOG0643|consensus	327		99.88
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.88
KOG0313|consensus	423		99.87
KOG0264|consensus	422		99.87
KOG0640|consensus	430		99.87
KOG0269|consensus	839		99.87
KOG0306|consensus	888		99.87
KOG1332|consensus	299		99.87
KOG0308|consensus	735		99.87
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.87
KOG1407|consensus	313		99.86
KOG0300|consensus	481		99.86
KOG0296|consensus	399		99.86
KOG0278|consensus	334		99.86
KOG0647|consensus	347		99.86
KOG0299|consensus	479		99.86
KOG0267|consensus	825		99.85
KOG0647|consensus	347		99.85
KOG0267|consensus	825		99.85
KOG0283|consensus	712		99.85
KOG4283|consensus	397		99.85
KOG0310|consensus	487		99.85
KOG0973|consensus	942		99.85
KOG0275|consensus	508		99.84
KOG0301|consensus	745		99.84
KOG0643|consensus	327		99.84
KOG0301|consensus	745		99.84
KOG0293|consensus	519		99.84
KOG0973|consensus	942		99.83
KOG0306|consensus	888		99.83
KOG0270|consensus	463		99.83
KOG0270|consensus	463		99.83
KOG0303|consensus	472		99.82
KOG0302|consensus	440		99.82
KOG0288|consensus	459		99.82
KOG0303|consensus	472		99.81
KOG1332|consensus	299		99.81
KOG0772|consensus	641		99.8
KOG0646|consensus	476		99.8
KOG0305|consensus	484		99.8
KOG0646|consensus	476		99.79
KOG1036|consensus	323		99.79
KOG0649|consensus	325		99.78
KOG1446|consensus	311		99.78
KOG0639|consensus	705		99.78
KOG0278|consensus	334		99.78
KOG0288|consensus	459		99.77
KOG1446|consensus	311		99.77
KOG0307|consensus	1049		99.77
KOG0641|consensus	350		99.77
KOG2445|consensus	361		99.77
KOG1034|consensus	385		99.77
KOG1036|consensus	323		99.77
KOG0649|consensus	325		99.76
KOG0772|consensus	641		99.76
KOG0641|consensus	350		99.76
KOG0290|consensus	364		99.76
KOG0289|consensus	506		99.76
KOG4328|consensus	498		99.75
KOG0268|consensus	433		99.75
KOG4283|consensus	397		99.75
KOG2048|consensus	691		99.74
KOG1009|consensus	434		99.74
KOG0642|consensus	577		99.74
KOG0293|consensus	519		99.73
KOG1539|consensus	910		99.73
KOG1407|consensus	313		99.73
KOG1445|consensus	1012		99.73
KOG0299|consensus	479		99.73
KOG0300|consensus	481		99.72
KOG1273|consensus	405		99.71
KOG0639|consensus	705		99.7
KOG1034|consensus	385		99.7
KOG1539|consensus	910		99.7
KOG1274|consensus	933		99.7
KOG2445|consensus	361		99.69
KOG4378|consensus	673		99.69
KOG1188|consensus	376		99.68
KOG1274|consensus	933		99.68
KOG1445|consensus	1012		99.68
KOG2096|consensus	420		99.68
KOG0321|consensus	720		99.68
KOG1408|consensus	1080		99.68
KOG0307|consensus	1049		99.66
KOG1007|consensus	370		99.66
KOG0322|consensus	323		99.65
KOG0644|consensus	1113		99.65
KOG1408|consensus	1080		99.65
KOG0640|consensus	430		99.65
KOG1273|consensus	405		99.65
KOG1310|consensus	758		99.64
KOG0268|consensus	433		99.64
KOG2394|consensus	636		99.63
KOG1188|consensus	376		99.62
KOG1009|consensus	434		99.61
KOG1063|consensus	764		99.61
KOG3881|consensus	412		99.6
KOG0321|consensus	720		99.6
KOG0644|consensus	1113		99.59
KOG0290|consensus	364		99.59
KOG0642|consensus	577		99.57
KOG1272|consensus	545		99.56
KOG2919|consensus	406		99.54
KOG1587|consensus	555		99.54
KOG2048|consensus	691		99.54
KOG4227|consensus	609		99.53
KOG4378|consensus	673		99.52
KOG2110|consensus	391		99.52
KOG0974|consensus	967		99.51
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.51
KOG1063|consensus	764		99.51
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.5
KOG2055|consensus	514		99.5
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.49
KOG2919|consensus	406		99.49
KOG2394|consensus	636		99.48
KOG1272|consensus	545		99.48
KOG2096|consensus	420		99.47
KOG0771|consensus	398		99.46
KOG2106|consensus	626		99.45
KOG1523|consensus	361		99.44
KOG0771|consensus	398		99.43
KOG4328|consensus	498		99.43
KOG1240|consensus	1431		99.43
KOG3914|consensus	390		99.43
KOG1517|consensus	1387		99.43
COG2319	466	FOG: WD40 repeat [General function prediction only	99.43
COG2319	466	FOG: WD40 repeat [General function prediction only	99.42
KOG2110|consensus	391		99.41
KOG1007|consensus	370		99.41
KOG2106|consensus	626		99.41
KOG4227|consensus	609		99.4
KOG2111|consensus	346		99.4
KOG1517|consensus	1387		99.4
KOG1310|consensus	758		99.4
KOG0650|consensus	733		99.39
KOG2055|consensus	514		99.39
KOG1524|consensus	737		99.36
KOG1587|consensus	555		99.36
KOG0974|consensus	967		99.35
KOG1524|consensus	737		99.34
KOG0650|consensus	733		99.32
KOG4547|consensus	541		99.31
KOG1963|consensus	792		99.31
KOG0280|consensus	339		99.29
KOG0280|consensus	339		99.28
KOG2695|consensus	425		99.27
KOG2321|consensus	703		99.26
KOG1523|consensus	361		99.26
KOG1409|consensus	404		99.23
KOG2111|consensus	346		99.23
KOG1538|consensus	1081		99.22
KOG0322|consensus	323		99.22
KOG2139|consensus	445		99.19
KOG1240|consensus	1431		99.18
KOG1538|consensus	1081		99.17
KOG4714|consensus	319		99.17
KOG4190|consensus	1034		99.16
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.15
KOG3881|consensus	412		99.14
KOG4547|consensus	541		99.12
KOG2139|consensus	445		99.11
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.11
KOG2321|consensus	703		99.05
KOG0309|consensus	1081		99.05
KOG1963|consensus	792		99.04
KOG1064|consensus	2439		99.04
KOG1334|consensus	559		99.03
KOG1334|consensus	559		99.02
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.0
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.99
KOG1354|consensus	433		98.9
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.89
PRK01742	429	tolB translocation protein TolB; Provisional	98.85
KOG2066|consensus	846		98.84
PRK11028	330	6-phosphogluconolactonase; Provisional	98.83
KOG4714|consensus	319		98.82
KOG1354|consensus	433		98.81
KOG4190|consensus	1034		98.8
PRK11028	330	6-phosphogluconolactonase; Provisional	98.79
KOG1275|consensus	1118		98.79
PRK01742	429	tolB translocation protein TolB; Provisional	98.78
KOG1409|consensus	404		98.72
PRK05137	435	tolB translocation protein TolB; Provisional	98.72
KOG3914|consensus	390		98.69
KOG2315|consensus	566		98.63
PRK02889	427	tolB translocation protein TolB; Provisional	98.62
KOG4532|consensus	344		98.6
KOG4532|consensus	344		98.59
KOG1064|consensus	2439		98.58
KOG0309|consensus	1081		98.55
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.55
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.54
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.54
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.53
KOG2695|consensus	425		98.52
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.49
KOG1912|consensus	1062		98.49
PRK04922	433	tolB translocation protein TolB; Provisional	98.47
PRK03629	429	tolB translocation protein TolB; Provisional	98.45
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.43
PRK04922	433	tolB translocation protein TolB; Provisional	98.43
KOG1275|consensus	1118		98.41
PRK02889	427	tolB translocation protein TolB; Provisional	98.39
KOG1645|consensus	463		98.38
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.38
COG4946	668	Uncharacterized protein related to the periplasmic	98.37
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.37
KOG1912|consensus	1062		98.36
PRK00178	430	tolB translocation protein TolB; Provisional	98.35
KOG4497|consensus	447		98.34
KOG2041|consensus	1189		98.33
KOG0882|consensus	558		98.33
KOG4497|consensus	447		98.31
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.31
PRK05137	435	tolB translocation protein TolB; Provisional	98.3
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.3
KOG2041|consensus	1189		98.22
PRK03629	429	tolB translocation protein TolB; Provisional	98.22
KOG1832|consensus	1516		98.17
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.17
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.14
PRK04792	448	tolB translocation protein TolB; Provisional	98.14
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.07
PRK01029	428	tolB translocation protein TolB; Provisional	98.04
KOG4649|consensus	354		98.03
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.02
KOG2114|consensus	933		98.02
KOG4640|consensus	665		98.01
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	98.0
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	97.99
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.99
KOG2079|consensus	1206		97.98
KOG2315|consensus	566		97.97
KOG4649|consensus	354		97.97
KOG3621|consensus	726		97.94
PRK00178	430	tolB translocation protein TolB; Provisional	97.92
PRK01029	428	tolB translocation protein TolB; Provisional	97.88
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	97.88
KOG1645|consensus	463		97.86
KOG3621|consensus	726		97.81
KOG2066|consensus	846		97.75
PRK04792	448	tolB translocation protein TolB; Provisional	97.72
KOG4640|consensus	665		97.62
COG4946	668	Uncharacterized protein related to the periplasmic	97.58
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.5
KOG1008|consensus	783		97.49
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	97.48
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	97.43
KOG2444|consensus	238		97.42
KOG1008|consensus	783		97.42
KOG0882|consensus	558		97.39
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.36
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.35
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	97.33
KOG2444|consensus	238		97.32
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	97.3
KOG2114|consensus	933		97.28
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	97.27
KOG2079|consensus	1206		97.18
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	97.17
KOG3617|consensus	1416		97.14
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.1
KOG2314|consensus	698		97.1
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.02
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	97.02
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.0
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	96.96
KOG1920|consensus	1265		96.95
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	96.88
PHA02713	557	hypothetical protein; Provisional	96.88
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	96.78
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	96.77
KOG1916|consensus	1283		96.77
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	96.75
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	96.74
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	96.72
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	96.69
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	96.66
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	96.63
KOG2314|consensus	698		96.62
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	96.61
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	96.59
PRK04043	419	tolB translocation protein TolB; Provisional	96.58
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	96.52
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	96.52
PRK02888	635	nitrous-oxide reductase; Validated	96.5
KOG1832|consensus	1516		96.49
KOG4499|consensus	310		96.49
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	96.4
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	96.38
KOG2395|consensus	644		96.33
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	96.31
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	96.25
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	96.24
COG1520	370	FOG: WD40-like repeat [Function unknown]	96.13
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	96.03
KOG3617|consensus	1416		95.88
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	95.77
KOG2395|consensus	644		95.75
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	95.73
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	95.65
PF01011	38	PQQ: PQQ enzyme repeat family.; InterPro: IPR00237	95.64
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	95.55
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	95.51
KOG4441|consensus	571		95.33
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	95.33
PHA03098	534	kelch-like protein; Provisional	95.04
smart00564	33	PQQ beta-propeller repeat. Beta-propeller repeat o	95.03
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	94.74
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	94.58
PRK04043	419	tolB translocation protein TolB; Provisional	94.48
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	94.29
KOG4499|consensus	310		94.29
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	94.25
KOG4460|consensus	741		94.24
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	94.04
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	93.89
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	93.87
PHA02713	557	hypothetical protein; Provisional	93.85
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	93.78
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	93.65
KOG4441|consensus	571		93.63
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	93.44
PF13570	40	PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.	93.42
PHA03098	534	kelch-like protein; Provisional	93.2
COG5167	776	VID27 Protein involved in vacuole import and degra	92.79
KOG3616|consensus	1636		92.64
PF12341	27	DUF3639: Protein of unknown function (DUF3639) ; I	92.61
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	92.13
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	92.04
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	91.95
PHA02790	480	Kelch-like protein; Provisional	91.94
KOG1920|consensus	1265		91.61
KOG3630|consensus	1405		91.6
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	91.56
PRK02888	635	nitrous-oxide reductase; Validated	91.55
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	91.27
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	90.62
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	90.36
PHA02790	480	Kelch-like protein; Provisional	90.36
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	89.77
KOG3630|consensus	1405		89.67
COG5276	370	Uncharacterized conserved protein [Function unknow	89.47
KOG2247|consensus	615		88.75
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	88.25
COG3391	381	Uncharacterized conserved protein [Function unknow	88.03
PF12768	281	Rax2: Cortical protein marker for cell polarity	87.88
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	87.75
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	87.61
PF14269	299	Arylsulfotran_2: Arylsulfotransferase (ASST)	86.96
PF14727	418	PHTB1_N: PTHB1 N-terminus	86.82
PRK13616	591	lipoprotein LpqB; Provisional	86.73
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	86.54
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	86.28
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	86.15
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	85.67
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	85.32
PRK13616	591	lipoprotein LpqB; Provisional	85.17
KOG3522|consensus	925		85.12
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	85.11
COG5167	776	VID27 Protein involved in vacuole import and degra	84.91
PF14269	299	Arylsulfotran_2: Arylsulfotransferase (ASST)	84.11
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	83.49
COG1520	370	FOG: WD40-like repeat [Function unknown]	83.29
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	83.26
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	82.9
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	82.49

>KOG0271|consensus

Probab=99.97  E-value=9.1e-30  Score=171.95  Aligned_cols=156  Identities=22%  Similarity=0.382  Sum_probs=140.0

Q ss_pred             cccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccce-eh
Q psy16373          3 KSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL-FT   79 (166)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~-~~   79 (166)
                      .++.+..+++|+.|..+++|+...+.       +.++.++|...|.|++|  ++..|++|+.||.|++||.++++++ ..
T Consensus       123 fsp~g~~l~tGsGD~TvR~WD~~TeT-------p~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~  195 (480)
T KOG0271|consen  123 FSPTGSRLVTGSGDTTVRLWDLDTET-------PLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRA  195 (480)
T ss_pred             ecCCCceEEecCCCceEEeeccCCCC-------cceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCccccc
Confidence            35567799999999999999986543       55678899999999999  8999999999999999999998665 67


Q ss_pred             hcCCCCceEEEEEcC-----CCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-CeEEEeecCCcEEEEEC
Q psy16373         80 LHGHCGPITTLFIDG-----VSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-SYVISLGQDERLCVWDR  153 (166)
Q Consensus        80 ~~~~~~~v~~~~~~~-----~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~  153 (166)
                      +.+|+..|++++|.|     ..+++++++.||.++|||+..+.++..+.+|+.+|+++.|-. ++|++++.|++|++|+.
T Consensus       196 l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a  275 (480)
T KOG0271|consen  196 LRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRA  275 (480)
T ss_pred             ccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEc
Confidence            899999999999965     477999999999999999999999999999999999999995 89999999999999999


Q ss_pred             Ccccceeeeeec
Q psy16373        154 FQGHLLSTIQLQ  165 (166)
Q Consensus       154 ~~~~~~~~~~~~  165 (166)
                      ..|.....++.+
T Consensus       276 ~dG~~~r~lkGH  287 (480)
T KOG0271|consen  276 LDGKLCRELKGH  287 (480)
T ss_pred             cchhHHHhhccc
Confidence            998887766543

>KOG0272|consensus

Probab=99.97  E-value=3.3e-30  Score=175.47  Aligned_cols=152  Identities=23%  Similarity=0.327  Sum_probs=141.3

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      ...+++|+.|+.+++|..+...       ++..+.+|...|..++|  +|.+|++++.|.+-++||++++..+....+|.
T Consensus       231 ~~~lat~s~Dgtvklw~~~~e~-------~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs  303 (459)
T KOG0272|consen  231 DLNLATASADGTVKLWKLSQET-------PLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHS  303 (459)
T ss_pred             ccceeeeccCCceeeeccCCCc-------chhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccc
Confidence            4579999999999999987643       45578899999999999  99999999999999999999999888889999


Q ss_pred             CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCcccceeee
Q psy16373         85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      ..|.+++|+|+|..+++|+.|..-+|||++++.++-.+.+|..+|.+++|+|+  .|+||+.|++++|||++..+++.++
T Consensus       304 ~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~i  383 (459)
T KOG0272|consen  304 KGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTI  383 (459)
T ss_pred             cccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceec
Confidence            99999999999999999999999999999999999999999999999999995  8999999999999999999888887


Q ss_pred             eec
Q psy16373        163 QLQ  165 (166)
Q Consensus       163 ~~~  165 (166)
                      ..+
T Consensus       384 pAH  386 (459)
T KOG0272|consen  384 PAH  386 (459)
T ss_pred             ccc
Confidence            654

>KOG0263|consensus

Probab=99.96  E-value=2.2e-29  Score=182.03  Aligned_cols=148  Identities=24%  Similarity=0.378  Sum_probs=137.5

Q ss_pred             cccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          3 KSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      .++++++|+|++.|++-++|.....       .+.+.+.+|...|.|++|  +.+++++||.|.+|++||+.+|..++.|
T Consensus       501 F~P~GyYFatas~D~tArLWs~d~~-------~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF  573 (707)
T KOG0263|consen  501 FAPRGYYFATASHDQTARLWSTDHN-------KPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIF  573 (707)
T ss_pred             ecCCceEEEecCCCceeeeeecccC-------CchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEe
Confidence            4688999999999999999997653       355677899999999999  8889999999999999999999999999


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      .+|+++|.+++|+|.|+++++|+.||.|.+||+.+++.+..+.+|++.|.++.|+.  ..|++++.|++|++||+..-.
T Consensus       574 ~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~  652 (707)
T KOG0263|consen  574 TGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVI  652 (707)
T ss_pred             cCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhc
Confidence            99999999999999999999999999999999999999999999999999999997  599999999999999986543

>KOG0286|consensus

Probab=99.96  E-value=7.5e-28  Score=157.66  Aligned_cols=161  Identities=17%  Similarity=0.241  Sum_probs=144.6

Q ss_pred             cccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          3 KSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      .++.+..++.|+-|+...+++....+. .........+.+|.+.+.|..| +...|++++.|.+..+||+++++.+..|.
T Consensus       105 ~sPSg~~VAcGGLdN~Csiy~ls~~d~-~g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~  183 (343)
T KOG0286|consen  105 YSPSGNFVACGGLDNKCSIYPLSTRDA-EGNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFH  183 (343)
T ss_pred             ECCCCCeEEecCcCceeEEEecccccc-cccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEec
Confidence            356788999999999998888864321 1222455678899999999999 99999999999999999999999999999


Q ss_pred             CCCCceEEEEEcC-CCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccc
Q psy16373         82 GHCGPITTLFIDG-VSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus        82 ~~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      +|.+.|.++++.| +++.+++|+.|+..++||+|.+.+.++|.+|++.|+++.|.|  .-+++|+.|++.++||+|..+.
T Consensus       184 GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~  263 (343)
T KOG0286|consen  184 GHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQE  263 (343)
T ss_pred             CCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcE
Confidence            9999999999999 799999999999999999999999999999999999999999  4899999999999999999998


Q ss_pred             eeeeee
Q psy16373        159 LSTIQL  164 (166)
Q Consensus       159 ~~~~~~  164 (166)
                      +..++-
T Consensus       264 ~a~ys~  269 (343)
T KOG0286|consen  264 LAVYSH  269 (343)
T ss_pred             Eeeecc
Confidence            887763

>KOG0272|consensus

Probab=99.96  E-value=3.3e-29  Score=170.61  Aligned_cols=155  Identities=19%  Similarity=0.288  Sum_probs=142.6

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      .+.+.+++|++.|..-++|+.....+.       ...+||..+|.+++|  +|.++++|+.|..-+|||+++++++..+.
T Consensus       270 HPsG~~L~TasfD~tWRlWD~~tk~El-------L~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~  342 (459)
T KOG0272|consen  270 HPSGKFLGTASFDSTWRLWDLETKSEL-------LLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLA  342 (459)
T ss_pred             cCCCceeeecccccchhhcccccchhh-------HhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEec
Confidence            345779999999999999998765532       234699999999999  99999999999999999999999999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCcccc
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      +|..+|.+++|+|.|..++||+.|++++|||++..+.+..+.+|..-|+.+.|+|   .+|+|++.|+++++|..+++++
T Consensus       343 gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~  422 (459)
T KOG0272|consen  343 GHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSP  422 (459)
T ss_pred             ccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCccc
Confidence            9999999999999999999999999999999999999999999999999999998   4999999999999999999999


Q ss_pred             eeeeeec
Q psy16373        159 LSTIQLQ  165 (166)
Q Consensus       159 ~~~~~~~  165 (166)
                      ++++..+
T Consensus       423 ~ksLaGH  429 (459)
T KOG0272|consen  423 LKSLAGH  429 (459)
T ss_pred             chhhcCC
Confidence            9887654

>KOG0263|consensus

Probab=99.96  E-value=4.1e-28  Score=175.58  Aligned_cols=154  Identities=22%  Similarity=0.329  Sum_probs=141.4

Q ss_pred             cccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          3 KSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      .++.+..|+++|.|+.+++|.+....       .+-.++||..||+++.|  .|-++++++.|++.++|......+++.+
T Consensus       459 FsPd~rfLlScSED~svRLWsl~t~s-------~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRif  531 (707)
T KOG0263|consen  459 FSPDRRFLLSCSEDSSVRLWSLDTWS-------CLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIF  531 (707)
T ss_pred             ecccccceeeccCCcceeeeecccce-------eEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhh
Confidence            46678899999999999999986543       22345699999999999  7889999999999999999999999999


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccc
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      .+|.+.|.|+.|+|+..++++|+.|.++++||+.+|..++.|.+|.++|.+++|+|  .+|++|+.|+.|.+||+.+++.
T Consensus       532 aghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~  611 (707)
T KOG0263|consen  532 AGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSL  611 (707)
T ss_pred             cccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999  4999999999999999999988


Q ss_pred             eeeee
Q psy16373        159 LSTIQ  163 (166)
Q Consensus       159 ~~~~~  163 (166)
                      +.++.
T Consensus       612 v~~l~  616 (707)
T KOG0263|consen  612 VKQLK  616 (707)
T ss_pred             hhhhh
Confidence            76654

>KOG0271|consensus

Probab=99.96  E-value=1.4e-27  Score=161.41  Aligned_cols=151  Identities=22%  Similarity=0.317  Sum_probs=131.8

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccc--------
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQL--------   76 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~--------   76 (166)
                      .-.++++++.|+.+++|+.....       .+..+.+|+.+|+|+.| ...+|++|+.|++|++|+...|+.        
T Consensus       216 ~~r~las~skDg~vrIWd~~~~~-------~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHa  288 (480)
T KOG0271|consen  216 PCRRLASSSKDGSVRIWDTKLGT-------CVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHA  288 (480)
T ss_pred             CccceecccCCCCEEEEEccCce-------EEEEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccc
Confidence            34488999999999999976532       45577899999999999 688999999999999999874322        


Q ss_pred             -----------------------------------------------------------------------eehhcCCCC
Q psy16373         77 -----------------------------------------------------------------------LFTLHGHCG   85 (166)
Q Consensus        77 -----------------------------------------------------------------------~~~~~~~~~   85 (166)
                                                                                             +..+.+|..
T Consensus       289 hwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~  368 (480)
T KOG0271|consen  289 HWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQA  368 (480)
T ss_pred             hheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhh
Confidence                                                                                   223357888


Q ss_pred             ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCcccceeeee
Q psy16373         86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      .|+.+.|+|+++++++++.|..|++||.++|+.+.+|++|-++|..++|+.+  .+++|+.|.++++|++++.+..+.++
T Consensus       369 lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLp  448 (480)
T KOG0271|consen  369 LVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLP  448 (480)
T ss_pred             heeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCC
Confidence            8999999999999999999999999999999999999999999999999985  99999999999999999988777665

>KOG0285|consensus

Probab=99.95  E-value=5.1e-27  Score=157.67  Aligned_cols=152  Identities=18%  Similarity=0.287  Sum_probs=139.3

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      -...|++|+.|+.+.+|+.....       ...++.||...|..+++  ...++++++.|+.|+.||++.++.++.+.+|
T Consensus       162 ~n~wf~tgs~DrtikIwDlatg~-------LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGH  234 (460)
T KOG0285|consen  162 GNEWFATGSADRTIKIWDLATGQ-------LKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGH  234 (460)
T ss_pred             CceeEEecCCCceeEEEEcccCe-------EEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccc
Confidence            35689999999999999986542       44577899999999999  5678999999999999999999999999999


Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceee
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLST  161 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~  161 (166)
                      -+.|.+++.+|.-..+++|+.|.++++||+++...+..+.+|+.+|..+.+.|  ..+++|+.|++|++||++.|+...+
T Consensus       235 lS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~t  314 (460)
T KOG0285|consen  235 LSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMIT  314 (460)
T ss_pred             cceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEe
Confidence            99999999999999999999999999999999999999999999999999997  6999999999999999999988776


Q ss_pred             eee
Q psy16373        162 IQL  164 (166)
Q Consensus       162 ~~~  164 (166)
                      +..
T Consensus       315 lt~  317 (460)
T KOG0285|consen  315 LTH  317 (460)
T ss_pred             eec
Confidence            643

>KOG0276|consensus

Probab=99.95  E-value=2.2e-27  Score=168.89  Aligned_cols=154  Identities=20%  Similarity=0.244  Sum_probs=140.2

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      +..+.+.++|+|-++++|+.+...      ...+++.||...|.+++|   +.+.+++++.|++|++|.+.+..+..++.
T Consensus       107 Pt~P~vLtsSDDm~iKlW~we~~w------a~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~  180 (794)
T KOG0276|consen  107 PTLPYVLTSSDDMTIKLWDWENEW------ACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLE  180 (794)
T ss_pred             CCCCeEEecCCccEEEEeeccCce------eeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeee
Confidence            456789999999999999987655      344578899999999999   78899999999999999999999999999


Q ss_pred             CCCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373         82 GHCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        82 ~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      +|...|+|+++-+.  ..++++|++|.++++||.++..+++++.+|...|..+.|+|  +.+++|++||++++|+..+-+
T Consensus       181 gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~  260 (794)
T KOG0276|consen  181 GHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYK  260 (794)
T ss_pred             ccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCccee
Confidence            99999999999665  46999999999999999999999999999999999999999  699999999999999999888


Q ss_pred             ceeeeee
Q psy16373        158 LLSTIQL  164 (166)
Q Consensus       158 ~~~~~~~  164 (166)
                      ...++..
T Consensus       261 lE~tLn~  267 (794)
T KOG0276|consen  261 LEKTLNY  267 (794)
T ss_pred             hhhhhhc
Confidence            7766654

>KOG0284|consensus

Probab=99.95  E-value=8e-28  Score=163.45  Aligned_cols=154  Identities=21%  Similarity=0.351  Sum_probs=137.7

Q ss_pred             cccceEEEEecCCCceEEEeecccccceeeceeeeeeeec-cCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceeh
Q psy16373          3 KSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRA-HHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFT   79 (166)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~   79 (166)
                      -+..+..+++|+.++.|++|..+.+.        +..+++ |...|.+++|  ....+++++.|++|+|||....+....
T Consensus       146 ws~~g~wmiSgD~gG~iKyWqpnmnn--------Vk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~v  217 (464)
T KOG0284|consen  146 WSHNGTWMISGDKGGMIKYWQPNMNN--------VKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERV  217 (464)
T ss_pred             EccCCCEEEEcCCCceEEecccchhh--------hHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhhe
Confidence            35567899999999999999976543        223344 4589999999  778999999999999999999888888


Q ss_pred             hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373         80 LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        80 ~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      +.+|.-.|.+++|+|....+++++.|..|++||.++++++.++.+|+..|..+.|++  ++|++++.|..++++|+++.+
T Consensus       218 L~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mk  297 (464)
T KOG0284|consen  218 LRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMK  297 (464)
T ss_pred             eccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhH
Confidence            899999999999999999999999999999999999999999999999999999998  699999999999999999888


Q ss_pred             ceeeeee
Q psy16373        158 LLSTIQL  164 (166)
Q Consensus       158 ~~~~~~~  164 (166)
                      .++.++.
T Consensus       298 El~~~r~  304 (464)
T KOG0284|consen  298 ELFTYRG  304 (464)
T ss_pred             HHHHhhc
Confidence            8776653

>KOG0266|consensus

Probab=99.95  E-value=4e-26  Score=165.21  Aligned_cols=149  Identities=26%  Similarity=0.440  Sum_probs=134.1

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEc-ccccceehh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKL-EDQQLLFTL   80 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~-~~~~~~~~~   80 (166)
                      +..+..+++++.++.+++|.......     .....+.+|...|.+++|  ++.++++++.|+++++||+ ..+..++++
T Consensus       168 s~~g~~l~~~~~~~~i~~~~~~~~~~-----~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l  242 (456)
T KOG0266|consen  168 SPDGRALAAASSDGLIRIWKLEGIKS-----NLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTL  242 (456)
T ss_pred             cCCCCeEEEccCCCcEEEeecccccc-----hhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEe
Confidence            55677899999999999999843321     233445789999999999  8889999999999999999 556888999


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      .+|...|++++|+|+++.+++|+.|++|++||++++++...+.+|.+.|++++|++  ..|++++.|+.|++||+.++.
T Consensus       243 ~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~  321 (456)
T KOG0266|consen  243 KGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGS  321 (456)
T ss_pred             cCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCc
Confidence            99999999999999999999999999999999999999999999999999999998  589999999999999999998

>KOG0279|consensus

Probab=99.94  E-value=1.3e-25  Score=146.34  Aligned_cols=154  Identities=18%  Similarity=0.214  Sum_probs=134.1

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      +..+.++++++.|+.+++|+....+       ..+.|.+|...|.++++  ++..+++|+.|.++++|+...........
T Consensus        72 s~dg~~alS~swD~~lrlWDl~~g~-------~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~  144 (315)
T KOG0279|consen   72 SSDGNFALSASWDGTLRLWDLATGE-------STRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHE  144 (315)
T ss_pred             ccCCceEEeccccceEEEEEecCCc-------EEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEec
Confidence            5667899999999999999986543       34467899999999999  88899999999999999998654443333


Q ss_pred             C-CCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCcc
Q psy16373         82 G-HCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQG  156 (166)
Q Consensus        82 ~-~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~  156 (166)
                      . +.+-|+|+.|+|.  ...+++++.|+++++||+++.+....+.+|.+.++.++++|+  .+++|+.||.+.+||++.+
T Consensus       145 ~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~  224 (315)
T KOG0279|consen  145 DSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEG  224 (315)
T ss_pred             CCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCC
Confidence            2 3778999999998  789999999999999999999999999999999999999994  8899999999999999999


Q ss_pred             cceeeeee
Q psy16373        157 HLLSTIQL  164 (166)
Q Consensus       157 ~~~~~~~~  164 (166)
                      +.++++..
T Consensus       225 k~lysl~a  232 (315)
T KOG0279|consen  225 KNLYSLEA  232 (315)
T ss_pred             ceeEeccC
Confidence            99887754

>KOG0266|consensus

Probab=99.94  E-value=2.4e-25  Score=161.21  Aligned_cols=155  Identities=23%  Similarity=0.387  Sum_probs=136.2

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      +..+..+++++.|..+++|+.....      ....++++|...|++++|  .++++++|+.|++|++||++++++...+.
T Consensus       212 s~d~~~l~s~s~D~tiriwd~~~~~------~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~  285 (456)
T KOG0266|consen  212 SPDGSYLLSGSDDKTLRIWDLKDDG------RNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLK  285 (456)
T ss_pred             CCCCcEEEEecCCceEEEeeccCCC------eEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeee
Confidence            3445589999999999999983321      345578899999999999  67899999999999999999999999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe--eeEEeecccc--cEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA--CMYSIQAHDG--CIHALTYSD--SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~--~~~~~~~~~~--~v~~i~~~~--~~l~~~~~d~~i~~wd~~~  155 (166)
                      +|...|++++|+++++.+++++.|+.+++||+.++.  +...+..+..  +++.+.|+|  .+++++..|+.+++||++.
T Consensus       286 ~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~  365 (456)
T KOG0266|consen  286 GHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRS  365 (456)
T ss_pred             ccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccC
Confidence            999999999999999999999999999999999998  5667766654  499999998  5999999999999999999


Q ss_pred             ccceeeeee
Q psy16373        156 GHLLSTIQL  164 (166)
Q Consensus       156 ~~~~~~~~~  164 (166)
                      +..+..+..
T Consensus       366 ~~~~~~~~~  374 (456)
T KOG0266|consen  366 GKSVGTYTG  374 (456)
T ss_pred             Ccceeeecc
Confidence            888776653

>KOG0279|consensus

Probab=99.94  E-value=1.9e-25  Score=145.50  Aligned_cols=154  Identities=19%  Similarity=0.267  Sum_probs=133.1

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      +..+++++.|..+..|+.....  .....+++.++||...|..+..  ++++.++++.|+.+++||+.+++..+.|.+|.
T Consensus        28 ~~~l~sasrDk~ii~W~L~~dd--~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~  105 (315)
T KOG0279|consen   28 SDILVSASRDKTIIVWKLTSDD--IKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHT  105 (315)
T ss_pred             CceEEEcccceEEEEEEeccCc--cccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecC
Confidence            5578999999999999987663  3334566778899999998888  99999999999999999999999999999999


Q ss_pred             CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc--cccEEEEEEcCC----eEEEeecCCcEEEEECCcccc
Q psy16373         85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH--DGCIHALTYSDS----YVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~--~~~v~~i~~~~~----~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      ..|.+++++++.+++++|+.|.++++||.... +..++..+  ++.|+++.|+|+    .|++++.|+++++||+++.+.
T Consensus       106 ~dVlsva~s~dn~qivSGSrDkTiklwnt~g~-ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l  184 (315)
T KOG0279|consen  106 KDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV-CKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQL  184 (315)
T ss_pred             CceEEEEecCCCceeecCCCcceeeeeeeccc-EEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcch
Confidence            99999999999999999999999999998644 34444333  788999999993    899999999999999998887


Q ss_pred             eeeee
Q psy16373        159 LSTIQ  163 (166)
Q Consensus       159 ~~~~~  163 (166)
                      ...+.
T Consensus       185 ~~~~~  189 (315)
T KOG0279|consen  185 RTTFI  189 (315)
T ss_pred             hhccc
Confidence            66554

>KOG0319|consensus

Probab=99.94  E-value=1.1e-25  Score=162.49  Aligned_cols=160  Identities=21%  Similarity=0.298  Sum_probs=140.2

Q ss_pred             ceEEEEecCCCceEEEeecccccceeece--eeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTC--CKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      ....|+++|.|.++++|......+...+.  ....+...|...|+|++.  +..++++||.|.+.++|+++..+....+.
T Consensus       423 ~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLs  502 (775)
T KOG0319|consen  423 GASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLS  502 (775)
T ss_pred             CccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEee
Confidence            45689999999999999997633222211  111233579999999999  77889999999999999999999999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      +|+..|.++.|+|..+.++|++.|++|++|.+.+.+++.+|.+|+..|..+.|-.  ..|++++.||.|++|+++++.++
T Consensus       503 GH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~  582 (775)
T KOG0319|consen  503 GHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECE  582 (775)
T ss_pred             CCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhh
Confidence            9999999999999999999999999999999999999999999999999999965  59999999999999999999999


Q ss_pred             eeeeec
Q psy16373        160 STIQLQ  165 (166)
Q Consensus       160 ~~~~~~  165 (166)
                      +++..+
T Consensus       583 ~tlD~H  588 (775)
T KOG0319|consen  583 MTLDAH  588 (775)
T ss_pred             hhhhhc
Confidence            887654

>KOG0275|consensus

Probab=99.94  E-value=1.3e-26  Score=154.55  Aligned_cols=163  Identities=21%  Similarity=0.263  Sum_probs=143.8

Q ss_pred             cccceEEEEecCCCceEEEeecccccc-eeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceeh
Q psy16373          3 KSVHRIHLRTGSAGSLLDFKKMQVEEE-MTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFT   79 (166)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~   79 (166)
                      .++.+.++++|+.||.+.+|+.....- ..........+.-+..+|.|++|  +.+.+++|+.||.|++|.+++|.+++.
T Consensus       221 FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRr  300 (508)
T KOG0275|consen  221 FSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRR  300 (508)
T ss_pred             eCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHH
Confidence            367788999999999999999854321 12223334445567889999999  888999999999999999999999999


Q ss_pred             hc-CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcc
Q psy16373         80 LH-GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQG  156 (166)
Q Consensus        80 ~~-~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~  156 (166)
                      |. +|...|+++.|+.++..+++++.|.++++.-+++|+++..+++|.+-|+...|.+  .++++++.||+|++|+.++.
T Consensus       301 FdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~Ktt  380 (508)
T KOG0275|consen  301 FDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTT  380 (508)
T ss_pred             hhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcch
Confidence            97 8999999999999999999999999999999999999999999999999999988  59999999999999999999


Q ss_pred             cceeeeeec
Q psy16373        157 HLLSTIQLQ  165 (166)
Q Consensus       157 ~~~~~~~~~  165 (166)
                      +++.++...
T Consensus       381 eC~~Tfk~~  389 (508)
T KOG0275|consen  381 ECLSTFKPL  389 (508)
T ss_pred             hhhhhccCC
Confidence            999888653

>KOG0281|consensus

Probab=99.94  E-value=2.4e-26  Score=154.28  Aligned_cols=149  Identities=19%  Similarity=0.334  Sum_probs=129.1

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCc
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP   86 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~   86 (166)
                      .-.+++|..|+.+++|+.+...       ....+.||++.|.|+.++...+++|+.|.+|++||+++++++.++.+|...
T Consensus       207 D~kiVSGlrDnTikiWD~n~~~-------c~~~L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l~tlihHcea  279 (499)
T KOG0281|consen  207 DEKIVSGLRDNTIKIWDKNSLE-------CLKILTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEA  279 (499)
T ss_pred             chhhhcccccCceEEeccccHH-------HHHhhhcCCCcEEeeeccceEEEecCCCceEEEEeccCCchhhHHhhhcce
Confidence            4467899999999999976543       345678999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEcCCCCEEEEecCCCcEEEEeCcCCee---eEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeee
Q psy16373         87 ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC---MYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus        87 v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~---~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      |..+.|+.  .++++++.|.++.+||+.+...   ...+.+|.+.|+.+.|+..++++++.|.+|++|++.+++.+.++.
T Consensus       280 VLhlrf~n--g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~kyIVsASgDRTikvW~~st~efvRtl~  357 (499)
T KOG0281|consen  280 VLHLRFSN--GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN  357 (499)
T ss_pred             eEEEEEeC--CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccceEEEecCCceEEEEeccceeeehhhh
Confidence            99999965  6889999999999999876542   344678999999999998999999999999999999988887765


Q ss_pred             e
Q psy16373        164 L  164 (166)
Q Consensus       164 ~  164 (166)
                      .
T Consensus       358 g  358 (499)
T KOG0281|consen  358 G  358 (499)
T ss_pred             c
Confidence            4

>KOG0273|consensus

Probab=99.94  E-value=4.3e-25  Score=152.59  Aligned_cols=152  Identities=22%  Similarity=0.293  Sum_probs=134.2

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccc-------
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ-------   75 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~-------   75 (166)
                      ..+..|++|+.+|.+++|+....        ...++..|.+||.++.|  .|++|++++.|+++.+||..+++       
T Consensus       245 ~~G~~LatG~~~G~~riw~~~G~--------l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~  316 (524)
T KOG0273|consen  245 NDGTLLATGSEDGEARIWNKDGN--------LISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEF  316 (524)
T ss_pred             CCCCeEEEeecCcEEEEEecCch--------hhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeee
Confidence            45889999999999999997543        23456789999999999  88999999999999999996432       


Q ss_pred             ----------------------------------ceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373         76 ----------------------------------LLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS  121 (166)
Q Consensus        76 ----------------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~  121 (166)
                                                        ++.++.+|.++|.++.|+|.+.++++++.|+++++|+.........
T Consensus       317 ~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~  396 (524)
T KOG0273|consen  317 HSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHD  396 (524)
T ss_pred             ccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhh
Confidence                                              3445578999999999999999999999999999999999999999


Q ss_pred             eecccccEEEEEEcCC-----------eEEEeecCCcEEEEECCcccceeeeee
Q psy16373        122 IQAHDGCIHALTYSDS-----------YVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       122 ~~~~~~~v~~i~~~~~-----------~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      +++|...|..+.|+|.           .+++++.|++|++||+..+.++.++.-
T Consensus       397 l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~k  450 (524)
T KOG0273|consen  397 LQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMK  450 (524)
T ss_pred             hhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeecc
Confidence            9999999999999871           799999999999999999999998853

>KOG0273|consensus

Probab=99.94  E-value=7.9e-25  Score=151.28  Aligned_cols=151  Identities=21%  Similarity=0.336  Sum_probs=134.8

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG   85 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~   85 (166)
                      .-|++++.++.+.++......       ++.++.+|.++|.++.|  .+.+|++++.|+++++|..........+++|..
T Consensus       330 ~~F~ts~td~~i~V~kv~~~~-------P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hsk  402 (524)
T KOG0273|consen  330 DEFATSSTDGCIHVCKVGEDR-------PVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSK  402 (524)
T ss_pred             ceEeecCCCceEEEEEecCCC-------cceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhcc
Confidence            357888888888887765443       45577899999999999  589999999999999999999999999999999


Q ss_pred             ceEEEEEcCCC---------CEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECC
Q psy16373         86 PITTLFIDGVS---------MMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRF  154 (166)
Q Consensus        86 ~v~~~~~~~~~---------~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~  154 (166)
                      .|..+.|+|++         ..+++++.|++|++||+..+.++..|..|+.+|.+++|+|  .++++|+.||.|.+|+++
T Consensus       403 ei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~  482 (524)
T KOG0273|consen  403 EIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTK  482 (524)
T ss_pred             ceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEecccc
Confidence            99999998864         4789999999999999999999999999999999999998  499999999999999999


Q ss_pred             cccceeeeeec
Q psy16373        155 QGHLLSTIQLQ  165 (166)
Q Consensus       155 ~~~~~~~~~~~  165 (166)
                      +++.++.+.-.
T Consensus       483 ~~~l~~s~~~~  493 (524)
T KOG0273|consen  483 TGKLVKSYQGT  493 (524)
T ss_pred             chheeEeecCC
Confidence            99998877643

>PTZ00421 coronin; Provisional

Probab=99.93  E-value=4.3e-24  Score=154.94  Aligned_cols=152  Identities=18%  Similarity=0.227  Sum_probs=125.9

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c-CcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V-SNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~-~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      .+..|++|+.|+.+++|+.............+..+.+|...|.+++|  . +++|++++.|+.|++||+++++.+..+.+
T Consensus        87 d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~  166 (493)
T PTZ00421         87 DPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKC  166 (493)
T ss_pred             CCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcC
Confidence            34689999999999999986532111112345567899999999999  3 46899999999999999999998888899


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeeccccc-EEEEEEcC--CeEEEee----cCCcEEEEECCc
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGC-IHALTYSD--SYVISLG----QDERLCVWDRFQ  155 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~-v~~i~~~~--~~l~~~~----~d~~i~~wd~~~  155 (166)
                      |...|.+++|+|++..+++++.|+.|++||+++++.+..+.+|.+. ...+.|.+  +.+++++    .|+.|++||+++
T Consensus       167 h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~  246 (493)
T PTZ00421        167 HSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRK  246 (493)
T ss_pred             CCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCC
Confidence            9999999999999999999999999999999999999999888764 44677876  4666654    478999999987


Q ss_pred             cc
Q psy16373        156 GH  157 (166)
Q Consensus       156 ~~  157 (166)
                      ..
T Consensus       247 ~~  248 (493)
T PTZ00421        247 MA  248 (493)
T ss_pred             CC
Confidence            54

>KOG0284|consensus

Probab=99.93  E-value=1.1e-25  Score=153.22  Aligned_cols=153  Identities=21%  Similarity=0.253  Sum_probs=137.1

Q ss_pred             cccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          3 KSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      .+.....|+++++|+.+++|+.....+       ...+.+|...|.|++|  ...++++|+.|..|++||.+++.++.++
T Consensus       188 fSpnDskF~t~SdDg~ikiWdf~~~ke-------e~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tl  260 (464)
T KOG0284|consen  188 FSPNDSKFLTCSDDGTIKIWDFRMPKE-------ERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATL  260 (464)
T ss_pred             cCCCCceeEEecCCCeEEEEeccCCch-------hheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhh
Confidence            455677899999999999999765432       2355799999999999  6778999999999999999999999999


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCccc
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      .+|+..|..+.|+|+++++++++.|..++++|+++.+.+..+++|+..|+++.|+|   +.+.+++.||.|..|.+...+
T Consensus       261 h~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~  340 (464)
T KOG0284|consen  261 HGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEE  340 (464)
T ss_pred             hhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccc
Confidence            99999999999999999999999999999999998999999999999999999998   699999999999999987555


Q ss_pred             ceeee
Q psy16373        158 LLSTI  162 (166)
Q Consensus       158 ~~~~~  162 (166)
                      ++..+
T Consensus       341 p~~~i  345 (464)
T KOG0284|consen  341 PLGEI  345 (464)
T ss_pred             cccCC
Confidence            55443

>PTZ00421 coronin; Provisional

Probab=99.93  E-value=5.7e-24  Score=154.30  Aligned_cols=158  Identities=16%  Similarity=0.236  Sum_probs=125.5

Q ss_pred             ceEEEEecCCCceEEEeecccccceeec-------eeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc-
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLT-------CCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ-   74 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~-   74 (166)
                      ....+++++.+.+...|....... ...       ......+.+|.++|.+++|   ++++|++|+.|++|++||+.++ 
T Consensus        31 d~~~~~~~n~~~~a~~w~~~gg~~-v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~  109 (493)
T PTZ00421         31 DCSNTIACNDRFIAVPWQQLGSTA-VLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEG  109 (493)
T ss_pred             CCCCcEeECCceEEEEEecCCceE-EeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCc
Confidence            344566666666666665322110 000       0111246799999999999   4578999999999999999764 


Q ss_pred             ------cceehhcCCCCceEEEEEcCCC-CEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecC
Q psy16373         75 ------QLLFTLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQD  145 (166)
Q Consensus        75 ------~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d  145 (166)
                            +++..+.+|...|.+++|+|.+ +.+++++.|+.|++||+++++.+..+.+|...|.+++|+|  ..+++++.|
T Consensus       110 ~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~D  189 (493)
T PTZ00421        110 LTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKD  189 (493)
T ss_pred             cccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCC
Confidence                  3456788999999999999984 7999999999999999999999999999999999999998  489999999


Q ss_pred             CcEEEEECCcccceeeeee
Q psy16373        146 ERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       146 ~~i~~wd~~~~~~~~~~~~  164 (166)
                      +.|++||+++++.+.++..
T Consensus       190 g~IrIwD~rsg~~v~tl~~  208 (493)
T PTZ00421        190 KKLNIIDPRDGTIVSSVEA  208 (493)
T ss_pred             CEEEEEECCCCcEEEEEec
Confidence            9999999999988776653

>KOG0281|consensus

Probab=99.93  E-value=3.4e-26  Score=153.57  Aligned_cols=117  Identities=24%  Similarity=0.452  Sum_probs=110.9

Q ss_pred             eeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee
Q psy16373         39 STRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC  118 (166)
Q Consensus        39 ~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~  118 (166)
                      .+.||...|+.+.|+..++++++.|.++++|+..+.+.++.+.+|+..|-|+.+  .++++++|+.|.+|++||+..|.+
T Consensus       315 VLvGHrAaVNvVdfd~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~c  392 (499)
T KOG0281|consen  315 VLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGAC  392 (499)
T ss_pred             HHhhhhhheeeeccccceEEEecCCceEEEEeccceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccccHH
Confidence            457899999999999899999999999999999999999999999999999987  478999999999999999999999


Q ss_pred             eEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCccc
Q psy16373        119 MYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       119 ~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      +..+++|+.-|.++.|+...+++|+.||+|++||+.++.
T Consensus       393 LRvLeGHEeLvRciRFd~krIVSGaYDGkikvWdl~aal  431 (499)
T KOG0281|consen  393 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAAL  431 (499)
T ss_pred             HHHHhchHHhhhheeecCceeeeccccceEEEEeccccc
Confidence            999999999999999999999999999999999997754

>KOG0295|consensus

Probab=99.93  E-value=2.4e-24  Score=144.78  Aligned_cols=152  Identities=22%  Similarity=0.398  Sum_probs=137.9

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      +.++++++.|..++.|+.....       .+.++.+|...|..++.  +|..++++++|.+|++|-+.+.++...++.|.
T Consensus       205 gd~ilS~srD~tik~We~~tg~-------cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hE  277 (406)
T KOG0295|consen  205 GDHILSCSRDNTIKAWECDTGY-------CVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHE  277 (406)
T ss_pred             CCeeeecccccceeEEecccce-------eEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccc
Confidence            5789999999999999976543       45678899999999999  89999999999999999999999999999999


Q ss_pred             CceEEEEEcCC----------C-----CEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCc
Q psy16373         85 GPITTLFIDGV----------S-----MMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDER  147 (166)
Q Consensus        85 ~~v~~~~~~~~----------~-----~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~  147 (166)
                      -+|-+++|.|.          +     ..+++++.|++|++||+.++.++.++.+|...|..++|+|  .+|+++..|++
T Consensus       278 h~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDkt  357 (406)
T KOG0295|consen  278 HPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKT  357 (406)
T ss_pred             cceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCc
Confidence            99999998663          2     4889999999999999999999999999999999999998  59999999999


Q ss_pred             EEEEECCcccceeeeeec
Q psy16373        148 LCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       148 i~~wd~~~~~~~~~~~~~  165 (166)
                      +++||+++++++.+++.+
T Consensus       358 lrvwdl~~~~cmk~~~ah  375 (406)
T KOG0295|consen  358 LRVWDLKNLQCMKTLEAH  375 (406)
T ss_pred             EEEEEeccceeeeccCCC
Confidence            999999999999887754

>KOG0277|consensus

Probab=99.93  E-value=1.5e-24  Score=139.94  Aligned_cols=153  Identities=20%  Similarity=0.262  Sum_probs=131.8

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      +....+++++.||.+++|+....      ..++..++.|...|.++.|   ....++++|-|++|++|+......+.++.
T Consensus        71 ~~e~~~~~a~GDGSLrl~d~~~~------s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~  144 (311)
T KOG0277|consen   71 NHENQVIAASGDGSLRLFDLTMP------SKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFN  144 (311)
T ss_pred             CCcceEEEEecCceEEEeccCCC------CcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeec
Confidence            45677889999999999995433      2477788999999999999   66778888999999999999999999999


Q ss_pred             CCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCccc
Q psy16373         82 GHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        82 ~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      +|.+.|....|+|. ++.+++++.|+++++||++..-....+..|...+.++.|+.   ..++|++.|+.|+.||+++-+
T Consensus       145 gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r  224 (311)
T KOG0277|consen  145 GHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR  224 (311)
T ss_pred             CCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhcc
Confidence            99999999999998 89999999999999999986544444888999999999986   699999999999999998754


Q ss_pred             -ceeeee
Q psy16373        158 -LLSTIQ  163 (166)
Q Consensus       158 -~~~~~~  163 (166)
                       ++..+.
T Consensus       225 ~pl~eL~  231 (311)
T KOG0277|consen  225 TPLFELN  231 (311)
T ss_pred             ccceeec
Confidence             455544

>KOG0264|consensus

Probab=99.93  E-value=1.7e-24  Score=148.68  Aligned_cols=154  Identities=15%  Similarity=0.234  Sum_probs=133.6

Q ss_pred             cccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcc--cccce
Q psy16373          3 KSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLE--DQQLL   77 (166)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~--~~~~~   77 (166)
                      +.+....+++++.++.+.+|+.+..........+...+.+|...|..++|   +.++|++++.|+.+.+||.+  +.++.
T Consensus       186 n~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~  265 (422)
T KOG0264|consen  186 NRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPS  265 (422)
T ss_pred             ccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCc
Confidence            34567789999999999999997765433334456667899999999999   78899999999999999999  55666


Q ss_pred             ehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCC-eeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEE
Q psy16373         78 FTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWD  152 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd  152 (166)
                      ....+|.+.|+|++|+|. +..+|+|+.|++|.+||+|+. +++.++.+|+..|..+.|+|   ..+++++.|+.+.+||
T Consensus       266 ~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWD  345 (422)
T KOG0264|consen  266 HSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWD  345 (422)
T ss_pred             ccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEe
Confidence            777889999999999997 778899999999999999976 67889999999999999999   4899999999999999


Q ss_pred             CCcc
Q psy16373        153 RFQG  156 (166)
Q Consensus       153 ~~~~  156 (166)
                      +..-
T Consensus       346 ls~i  349 (422)
T KOG0264|consen  346 LSRI  349 (422)
T ss_pred             cccc
Confidence            9653

>KOG0286|consensus

Probab=99.93  E-value=5.8e-24  Score=139.57  Aligned_cols=152  Identities=17%  Similarity=0.236  Sum_probs=134.6

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      ..+++|++.|....+|+.+...       ....+.+|.+.|.++++   +++.+++|+.|...++||++.+...+.|.+|
T Consensus       156 D~~ilT~SGD~TCalWDie~g~-------~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~gh  228 (343)
T KOG0286|consen  156 DNHILTGSGDMTCALWDIETGQ-------QTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGH  228 (343)
T ss_pred             CCceEecCCCceEEEEEcccce-------EEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeeccc
Confidence            5689999999999999987654       44567799999999999   6789999999999999999999999999999


Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc--cccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH--DGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~--~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      ...|++++|.|+|.-+++|++|++.++||+|....+..++..  ..+|++++|+.  .+|+.|-.|..+.+||.-.++.+
T Consensus       229 esDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~v  308 (343)
T KOG0286|consen  229 ESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERV  308 (343)
T ss_pred             ccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceE
Confidence            999999999999999999999999999999998888887632  24899999987  57888888999999999888887


Q ss_pred             eeeeec
Q psy16373        160 STIQLQ  165 (166)
Q Consensus       160 ~~~~~~  165 (166)
                      ..+..+
T Consensus       309 g~L~GH  314 (343)
T KOG0286|consen  309 GVLAGH  314 (343)
T ss_pred             EEeecc
Confidence            766543

>KOG0316|consensus

Probab=99.93  E-value=1.8e-24  Score=138.42  Aligned_cols=148  Identities=13%  Similarity=0.177  Sum_probs=131.9

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      .+.+.++++.|..+++|++-.       ...++++.+|...|..++.  ++..|++|+.|..+.+||+.+++.++.+.+|
T Consensus        28 dGnY~ltcGsdrtvrLWNp~r-------g~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH  100 (307)
T KOG0316|consen   28 DGNYCLTCGSDRTVRLWNPLR-------GALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGH  100 (307)
T ss_pred             CCCEEEEcCCCceEEeecccc-------cceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccc
Confidence            567889999999999999643       3456688899999998888  8889999999999999999999999999999


Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC--eeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCccccee
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG--ACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~--~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      .+.|+.+.|+.+...+++|+.|.++++||.++.  +|++.+......|.++..+...|++|+.||+++.||++.|+...
T Consensus       101 ~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~s  179 (307)
T KOG0316|consen  101 LAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLSS  179 (307)
T ss_pred             cceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecccEEEeeccCCcEEEEEeecceeeh
Confidence            999999999999999999999999999999855  78888877788899999988889999999999999998876543

>KOG0265|consensus

Probab=99.93  E-value=2.3e-24  Score=141.73  Aligned_cols=154  Identities=19%  Similarity=0.248  Sum_probs=133.4

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      .+.+..|++|+.|..|.+|+.....      +....+++|++.|..+.|  +++.+++++.|.+|+.||.++++..+.++
T Consensus        56 ~P~gs~~aSgG~Dr~I~LWnv~gdc------eN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k  129 (338)
T KOG0265|consen   56 HPDGSCFASGGSDRAIVLWNVYGDC------ENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHK  129 (338)
T ss_pred             CCCCCeEeecCCcceEEEEeccccc------cceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhc
Confidence            4578899999999999999964433      334456799999999999  99999999999999999999999999999


Q ss_pred             CCCCceEEEEEcCCC-CEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccc
Q psy16373         82 GHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      +|...|+.+.....+ .++.+++.|+++++||+|+..+++.+.. +-.++++.|..  +.+++|+-|+.|++||++.+..
T Consensus       130 ~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~-kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~  208 (338)
T KOG0265|consen  130 GHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFEN-KYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDG  208 (338)
T ss_pred             cccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcccc-ceeEEEEEecccccceeeccccCceeeeccccCcc
Confidence            999999999865554 4667788999999999999999888763 67899999987  6999999999999999999888


Q ss_pred             eeeeee
Q psy16373        159 LSTIQL  164 (166)
Q Consensus       159 ~~~~~~  164 (166)
                      ...+..
T Consensus       209 ~~~lsG  214 (338)
T KOG0265|consen  209 LYTLSG  214 (338)
T ss_pred             eEEeec
Confidence            776654

>KOG0319|consensus

Probab=99.92  E-value=3.1e-24  Score=154.98  Aligned_cols=145  Identities=20%  Similarity=0.301  Sum_probs=133.8

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      ++..-+++|||.|+..++|..+.       .....++.||...|.|+.|  ..+.++++|.|.+|++|.+.+..+++++.
T Consensus       472 a~ndkLiAT~SqDktaKiW~le~-------~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~e  544 (775)
T KOG0319|consen  472 APNDKLIATGSQDKTAKIWDLEQ-------LRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFE  544 (775)
T ss_pred             cCCCceEEecccccceeeecccC-------ceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeec
Confidence            45677999999999999999872       3456688999999999999  66799999999999999999999999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~  155 (166)
                      +|...|....|-.++..+++++.||.+++|++++++++.++.+|+..|++++.++  ++++||+.|+.|.+|.=-+
T Consensus       545 GH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~T  620 (775)
T KOG0319|consen  545 GHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDVT  620 (775)
T ss_pred             CccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEeecCc
Confidence            9999999999999999999999999999999999999999999999999999998  6899999999999996443

>KOG0315|consensus

Probab=99.92  E-value=2.1e-23  Score=134.35  Aligned_cols=151  Identities=17%  Similarity=0.319  Sum_probs=126.1

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc---------
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ---------   74 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~---------   74 (166)
                      .+..+++|+.|+.+++|++....     +.   ....|..+|+++..  +...|++|..+|.|++||+.+.         
T Consensus        94 dgrWMyTgseDgt~kIWdlR~~~-----~q---R~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe  165 (311)
T KOG0315|consen   94 DGRWMYTGSEDGTVKIWDLRSLS-----CQ---RNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPE  165 (311)
T ss_pred             cCeEEEecCCCceEEEEeccCcc-----cc---hhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCC
Confidence            46789999999999999987632     11   22356688999988  6667999999999999998722         


Q ss_pred             ----------------------------------------cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373         75 ----------------------------------------QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        75 ----------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~  114 (166)
                                                              +++..++.|..-+....++|++.++++++.|.+++||+..
T Consensus       166 ~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~  245 (311)
T KOG0315|consen  166 DDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTD  245 (311)
T ss_pred             CCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecC
Confidence                                                    2344557788889999999999999999999999999998


Q ss_pred             CC-eeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        115 TG-ACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       115 ~~-~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      +- +....+++|...++..+|+.  .+|+|++.|+..++|+++.++.+..++.
T Consensus       246 ~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~g  298 (311)
T KOG0315|consen  246 DFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQG  298 (311)
T ss_pred             CceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCC
Confidence            87 66677889999999999997  4999999999999999999998877653

>KOG0313|consensus

Probab=99.92  E-value=8.8e-24  Score=142.80  Aligned_cols=160  Identities=23%  Similarity=0.307  Sum_probs=134.8

Q ss_pred             cceEEEEecCCCceEEEeecccccc------------------eeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCe
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEE------------------MTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHT   65 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~   65 (166)
                      ..+.++++|+.|..+.+|..+...+                  ......++-++.+|..+|.++.| +...+++++-|++
T Consensus       203 ~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHT  282 (423)
T KOG0313|consen  203 SSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHT  282 (423)
T ss_pred             CCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCCCceEeecccce
Confidence            4578999999999999999321111                  11123456678899999999999 8889999999999


Q ss_pred             EEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC---eeeEEeecccccEEEEEEcC---CeE
Q psy16373         66 LKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG---ACMYSIQAHDGCIHALTYSD---SYV  139 (166)
Q Consensus        66 v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~---~~~~~~~~~~~~v~~i~~~~---~~l  139 (166)
                      |+.||++++....++.+ .....+++++|...++++|+.|..+++||.|++   -..+++.+|...|.++.|+|   .++
T Consensus       283 Ik~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~  361 (423)
T KOG0313|consen  283 IKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQL  361 (423)
T ss_pred             EEEEEeecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEE
Confidence            99999999998887774 457899999999999999999999999999966   35677899999999999999   389


Q ss_pred             EEeecCCcEEEEECCccc-ceeeeeec
Q psy16373        140 ISLGQDERLCVWDRFQGH-LLSTIQLQ  165 (166)
Q Consensus       140 ~~~~~d~~i~~wd~~~~~-~~~~~~~~  165 (166)
                      ++++.|+++++||+|+.+ +++.+..+
T Consensus       362 ~S~S~D~t~klWDvRS~k~plydI~~h  388 (423)
T KOG0313|consen  362 VSGSYDNTVKLWDVRSTKAPLYDIAGH  388 (423)
T ss_pred             EEEecCCeEEEEEeccCCCcceeeccC
Confidence            999999999999999987 88776543

>PTZ00420 coronin; Provisional

Probab=99.92  E-value=4.7e-23  Score=150.78  Aligned_cols=145  Identities=16%  Similarity=0.251  Sum_probs=117.6

Q ss_pred             ecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEccccc--------ceehh
Q psy16373         12 TGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQ--------LLFTL   80 (166)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~--------~~~~~   80 (166)
                      +|+..+.+.+|+....       ..+..+.+|..+|.+++|   ++++|++|+.|+.|++||+.++.        ++..+
T Consensus        49 gGG~~gvI~L~~~~r~-------~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L  121 (568)
T PTZ00420         49 GGGLIGAIRLENQMRK-------PPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCIL  121 (568)
T ss_pred             CCCceeEEEeeecCCC-------ceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEe
Confidence            3455566666664322       234567899999999999   26799999999999999997642        23456


Q ss_pred             cCCCCceEEEEEcCCCCE-EEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373         81 HGHCGPITTLFIDGVSMM-SGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~-~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      .+|...|.+++|+|++.. +++++.|+.|++||+++++.+..+. |...|.+++|++  ..|++++.|+.|++||+++++
T Consensus       122 ~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~  200 (568)
T PTZ00420        122 KGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQE  200 (568)
T ss_pred             ecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCc
Confidence            789999999999998765 5789999999999999998777775 567899999998  488888899999999999999


Q ss_pred             ceeeeee
Q psy16373        158 LLSTIQL  164 (166)
Q Consensus       158 ~~~~~~~  164 (166)
                      .+.++..
T Consensus       201 ~i~tl~g  207 (568)
T PTZ00420        201 IASSFHI  207 (568)
T ss_pred             EEEEEec
Confidence            8877654

>KOG0276|consensus

Probab=99.92  E-value=7.5e-24  Score=151.12  Aligned_cols=153  Identities=22%  Similarity=0.309  Sum_probs=139.4

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc-cceehhcC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ-QLLFTLHG   82 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~-~~~~~~~~   82 (166)
                      |...+++|++|..|++++.+..+       ++..+..|.+.|.|++.  ...+++++|.|-.|++||.+.. .+.+.+.+
T Consensus        66 RknWiv~GsDD~~IrVfnynt~e-------kV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeG  138 (794)
T KOG0276|consen   66 RKNWIVTGSDDMQIRVFNYNTGE-------KVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEG  138 (794)
T ss_pred             ccceEEEecCCceEEEEecccce-------eeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcC
Confidence            67899999999999999987654       56688999999999999  5678999999999999999875 67788999


Q ss_pred             CCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC----CeEEEeecCCcEEEEECCccc
Q psy16373         83 HCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD----SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        83 ~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~----~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      |.--|.+++|+|. .+.+++++.|++|++|.+.+..+..++++|...|+++.+-+    ++|++|+.|..+++||..+..
T Consensus       139 H~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~  218 (794)
T KOG0276|consen  139 HEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKS  218 (794)
T ss_pred             cceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHH
Confidence            9999999999996 88999999999999999999999999999999999999965    499999999999999999999


Q ss_pred             ceeeeeec
Q psy16373        158 LLSTIQLQ  165 (166)
Q Consensus       158 ~~~~~~~~  165 (166)
                      ++++++.+
T Consensus       219 CV~TLeGH  226 (794)
T KOG0276|consen  219 CVQTLEGH  226 (794)
T ss_pred             HHHHhhcc
Confidence            99887643

>KOG0285|consensus

Probab=99.92  E-value=3.1e-24  Score=144.37  Aligned_cols=130  Identities=19%  Similarity=0.247  Sum_probs=121.4

Q ss_pred             eeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEe
Q psy16373         35 CKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWD  112 (166)
Q Consensus        35 ~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d  112 (166)
                      +....+.+|.+.|.|+++  .++.|++|+.|+++++||+.++++..++.+|...|..+++++...++.+++.|+.|+.||
T Consensus       142 Kl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwD  221 (460)
T KOG0285|consen  142 KLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWD  221 (460)
T ss_pred             eehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEe
Confidence            334557899999999999  667899999999999999999999999999999999999999999999999999999999


Q ss_pred             CcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        113 TVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       113 ~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      +...+.++.+.+|-+.|.+++.+|  +.|++|+.|..+++||+|+...+..+..
T Consensus       222 Le~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~G  275 (460)
T KOG0285|consen  222 LEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSG  275 (460)
T ss_pred             chhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecC
Confidence            999999999999999999999998  7999999999999999999988887763

>KOG0291|consensus

Probab=99.92  E-value=2.9e-23  Score=150.65  Aligned_cols=154  Identities=19%  Similarity=0.280  Sum_probs=130.4

Q ss_pred             CcccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcc-------
Q psy16373          2 NKSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLE-------   72 (166)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~-------   72 (166)
                      ..++.+-+++||++|+.+++|+....       ....++..|+..|+.+.|  .++.+++.+.||+|+.||+.       
T Consensus       357 ~YSpDgq~iaTG~eDgKVKvWn~~Sg-------fC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRT  429 (893)
T KOG0291|consen  357 AYSPDGQLIATGAEDGKVKVWNTQSG-------FCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRT  429 (893)
T ss_pred             EECCCCcEEEeccCCCcEEEEeccCc-------eEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeee
Confidence            34667889999999999999997543       245578899999999999  89999999999999999997       


Q ss_pred             -------------------------------------cccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC
Q psy16373         73 -------------------------------------DQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT  115 (166)
Q Consensus        73 -------------------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~  115 (166)
                                                           +|+.+-.+.+|.++|.+++|+|.+..+++++.|.+|++||+-.
T Consensus       430 ft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~  509 (893)
T KOG0291|consen  430 FTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFS  509 (893)
T ss_pred             ecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeec
Confidence                                                 4455566689999999999999999999999999999999865


Q ss_pred             Ce-eeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373        116 GA-CMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       116 ~~-~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      .. .+-++. +...+.+++|.|  ..+++++.||.|.+||...+..+.+|.
T Consensus       510 s~~~vEtl~-i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~Id  559 (893)
T KOG0291|consen  510 SSGTVETLE-IRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSID  559 (893)
T ss_pred             cCceeeeEe-eccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeecccc
Confidence            53 333343 577899999998  489999999999999998887776554

>KOG0645|consensus

Probab=99.91  E-value=2.1e-22  Score=131.06  Aligned_cols=145  Identities=16%  Similarity=0.266  Sum_probs=126.2

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc--cceehhcC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ--QLLFTLHG   82 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~--~~~~~~~~   82 (166)
                      +..|++|+.|+.+++|......  ...++. ..-.+|+..|.+++|  .+++|+++|-|.++.+|.-..+  +++..+.+
T Consensus        27 g~ilAscg~Dk~vriw~~~~~~--s~~ck~-vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEG  103 (312)
T KOG0645|consen   27 GVILASCGTDKAVRIWSTSSGD--SWTCKT-VLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEG  103 (312)
T ss_pred             ceEEEeecCCceEEEEecCCCC--cEEEEE-eccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeec
Confidence            4589999999999999987522  233321 122489999999999  8999999999999999988754  67889999


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC---eeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECC
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG---ACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRF  154 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~---~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~  154 (166)
                      |.+.|.+++|+++|++||+|+.|+.|.+|.+...   ++...++.|...|-.+.|+|  +.|++++.|++|++|.-.
T Consensus       104 HEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~  180 (312)
T KOG0645|consen  104 HENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDE  180 (312)
T ss_pred             cccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeec
Confidence            9999999999999999999999999999998733   67888999999999999999  799999999999999876

>KOG0316|consensus

Probab=99.91  E-value=9.8e-24  Score=135.04  Aligned_cols=129  Identities=17%  Similarity=0.242  Sum_probs=119.2

Q ss_pred             eeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEE
Q psy16373         34 CCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVW  111 (166)
Q Consensus        34 ~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~  111 (166)
                      .+....+.++.++|..+.|  +|++.++++.|.+|++|+...+.+++++.+|...|..++.+.+...+++|+.|..+.+|
T Consensus         7 tkr~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vw   86 (307)
T KOG0316|consen    7 TKRLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVW   86 (307)
T ss_pred             chhceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEE
Confidence            3455677899999999999  99999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcc--cceeee
Q psy16373        112 DTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQG--HLLSTI  162 (166)
Q Consensus       112 d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~--~~~~~~  162 (166)
                      |+.+++.++.+.+|.+.|+.++|+.  ..+++++.|.++++||.++.  ++++.+
T Consensus        87 DV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQil  141 (307)
T KOG0316|consen   87 DVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQIL  141 (307)
T ss_pred             EcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchh
Confidence            9999999999999999999999998  58999999999999999864  455544

>KOG0274|consensus

Probab=99.91  E-value=2.4e-23  Score=151.73  Aligned_cols=150  Identities=28%  Similarity=0.426  Sum_probs=138.2

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCc
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP   86 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~   86 (166)
                      ...+++|+.|..+++|+.....       ....+.+|...|.++...+..+++|+.|.+|++|++.++..+..+.+|.++
T Consensus       261 ~~~lvsgS~D~t~rvWd~~sg~-------C~~~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~  333 (537)
T KOG0274|consen  261 GDKLVSGSTDKTERVWDCSTGE-------CTHSLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGP  333 (537)
T ss_pred             CCEEEEEecCCcEEeEecCCCc-------EEEEecCCCceEEEEEccCceEeeccCCceEEEEeccCcceEEEecccccc
Confidence            6788999999999999965443       455778999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-CeEEEeecCCcEEEEECCcc-cceeeeee
Q psy16373         87 ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-SYVISLGQDERLCVWDRFQG-HLLSTIQL  164 (166)
Q Consensus        87 v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~-~~~~~~~~  164 (166)
                      |.++..+  +.++++|+.|++|++||..+++++.++++|...|.++.+.+ +.+++|+.|++|++||++++ +++.+++.
T Consensus       334 V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~  411 (537)
T KOG0274|consen  334 VNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQG  411 (537)
T ss_pred             EEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCcceEEeeeeccceEeecCCchhhhhhhhcC
Confidence            9999997  78999999999999999999999999999999999999999 99999999999999999999 88877765


Q ss_pred             c
Q psy16373        165 Q  165 (166)
Q Consensus       165 ~  165 (166)
                      +
T Consensus       412 h  412 (537)
T KOG0274|consen  412 H  412 (537)
T ss_pred             C
Confidence            4

>KOG0315|consensus

Probab=99.91  E-value=4.4e-23  Score=132.94  Aligned_cols=144  Identities=17%  Similarity=0.280  Sum_probs=122.8

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccc--ceehhc
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ--LLFTLH   81 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~--~~~~~~   81 (166)
                      ...+|++++.|..|++|.....       ....+++.....|+.+..  ++..|++++ ...|++||+.++.  ++.++.
T Consensus         9 ~~viLvsA~YDhTIRfWqa~tG-------~C~rTiqh~dsqVNrLeiTpdk~~LAaa~-~qhvRlyD~~S~np~Pv~t~e   80 (311)
T KOG0315|consen    9 DPVILVSAGYDHTIRFWQALTG-------ICSRTIQHPDSQVNRLEITPDKKDLAAAG-NQHVRLYDLNSNNPNPVATFE   80 (311)
T ss_pred             CceEEEeccCcceeeeeehhcC-------eEEEEEecCccceeeEEEcCCcchhhhcc-CCeeEEEEccCCCCCceeEEe
Confidence            4579999999999999997543       244566667788999999  566666665 5789999999874  578899


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCcccc
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      +|...|.++.|..+|+++.+|++||+++|||+|+..+.+.++ |.++|+++..+|+  .|+++..+|.|++||+++..+
T Consensus        81 ~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c  158 (311)
T KOG0315|consen   81 GHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSC  158 (311)
T ss_pred             ccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCCcc
Confidence            999999999999999999999999999999999977666666 6799999999994  899999999999999987644

>PTZ00420 coronin; Provisional

Probab=99.91  E-value=3e-22  Score=146.56  Aligned_cols=157  Identities=14%  Similarity=0.222  Sum_probs=122.9

Q ss_pred             eEEEEecCCCceEEEeecccccc-eeeceeeeeeeeccCCceEEEEe--cCc-EEEEEecCCeEEEEEcccccceehhcC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEE-MTLTCCKVESTRAHHQPITVLEC--VSN-RVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~--~~~-~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      +..|++|+.|+.+++|+...... ......+...+.+|...|.+++|  ++. .+++++.|+.|++||+++++....+. 
T Consensus        87 ~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-  165 (568)
T PTZ00420         87 SEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-  165 (568)
T ss_pred             CCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-
Confidence            56899999999999999864321 11001233456789999999999  344 46789999999999999988776665 


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEE-----EEcC--CeEEEeecCC----cEEEE
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHAL-----TYSD--SYVISLGQDE----RLCVW  151 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i-----~~~~--~~l~~~~~d~----~i~~w  151 (166)
                      |...|.+++|+|+|..+++++.|+.+++||+++++.+..+.+|.+.+...     .|++  +++++++.|+    .|++|
T Consensus       166 ~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLW  245 (568)
T PTZ00420        166 MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLW  245 (568)
T ss_pred             cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEE
Confidence            56789999999999999999999999999999999999999998754332     2334  5888888774    79999


Q ss_pred             ECCc-ccceeeeee
Q psy16373        152 DRFQ-GHLLSTIQL  164 (166)
Q Consensus       152 d~~~-~~~~~~~~~  164 (166)
                      |+++ ++++..+.+
T Consensus       246 Dlr~~~~pl~~~~l  259 (568)
T PTZ00420        246 DLKNTTSALVTMSI  259 (568)
T ss_pred             ECCCCCCceEEEEe
Confidence            9995 566665543

>KOG0269|consensus

Probab=99.91  E-value=6.6e-24  Score=154.11  Aligned_cols=151  Identities=19%  Similarity=0.289  Sum_probs=132.6

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      ++...++++++..|.+.+|+.....    ..+.+..+..|...++++.|   .+++|++|+.||.|++||++..+...++
T Consensus        97 ~~~~NlIAT~s~nG~i~vWdlnk~~----rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~  172 (839)
T KOG0269|consen   97 QLYSNLIATCSTNGVISVWDLNKSI----RNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTF  172 (839)
T ss_pred             cchhhhheeecCCCcEEEEecCccc----cchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccc
Confidence            4456789999999999999987631    22344567799999999999   7899999999999999999999888888


Q ss_pred             cCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCC-eeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcc
Q psy16373         81 HGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQG  156 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~  156 (166)
                      .+....|.++.|+|. +..|+++.+.|.+.+||+|.. ++...+.+|.++|.++.|+|  .+|+||+.|+.|++||..++
T Consensus       173 ~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~  252 (839)
T KOG0269|consen  173 RSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDS  252 (839)
T ss_pred             cccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCC
Confidence            888889999999997 889999999999999999966 66778899999999999999  49999999999999999865


Q ss_pred             cc
Q psy16373        157 HL  158 (166)
Q Consensus       157 ~~  158 (166)
                      +.
T Consensus       253 ~~  254 (839)
T KOG0269|consen  253 RA  254 (839)
T ss_pred             Cc
Confidence            54

>KOG0295|consensus

Probab=99.91  E-value=8.3e-23  Score=137.47  Aligned_cols=144  Identities=22%  Similarity=0.357  Sum_probs=128.1

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe------------cC-----cEEEEEecCCeE
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC------------VS-----NRVITGSQDHTL   66 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------------~~-----~~l~~~~~d~~v   66 (166)
                      ...++++++++.+..+.+|.....+       ....+..|.-+|.|++|            .+     .++.+++.|++|
T Consensus       244 ~~DGti~As~s~dqtl~vW~~~t~~-------~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktI  316 (406)
T KOG0295|consen  244 NQDGTIIASCSNDQTLRVWVVATKQ-------CKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTI  316 (406)
T ss_pred             cCCeeEEEecCCCceEEEEEeccch-------hhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceE
Confidence            3468899999999999999976542       12245678888888888            12     489999999999


Q ss_pred             EEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeec
Q psy16373         67 KVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQ  144 (166)
Q Consensus        67 ~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~  144 (166)
                      ++||+.++.++.++.+|.+-|..++|+|.|++++++.+|+++++||+++..+...+..|+.-|+++.|+.  ++++||+-
T Consensus       317 k~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsV  396 (406)
T KOG0295|consen  317 KIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSV  396 (406)
T ss_pred             EEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999987  69999999


Q ss_pred             CCcEEEEECC
Q psy16373        145 DERLCVWDRF  154 (166)
Q Consensus       145 d~~i~~wd~~  154 (166)
                      |..+++|..+
T Consensus       397 dqt~KvwEcr  406 (406)
T KOG0295|consen  397 DQTVKVWECR  406 (406)
T ss_pred             cceeeeeecC
Confidence            9999999753

>KOG0318|consensus

Probab=99.91  E-value=2.3e-22  Score=140.98  Aligned_cols=148  Identities=22%  Similarity=0.238  Sum_probs=129.8

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      ..|+.+++||++|+.+.++...+       .+...++..|..-|.|+.|  +|+++++.+.||++.+||-.+++.+..+.
T Consensus       157 psRPfRi~T~sdDn~v~ffeGPP-------FKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~  229 (603)
T KOG0318|consen  157 PSRPFRIATGSDDNTVAFFEGPP-------FKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELE  229 (603)
T ss_pred             CCCceEEEeccCCCeEEEeeCCC-------eeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEec
Confidence            45899999999999999987542       3455567789999999999  99999999999999999999999998887


Q ss_pred             ---CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe------------------------------------
Q psy16373         82 ---GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI------------------------------------  122 (166)
Q Consensus        82 ---~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~------------------------------------  122 (166)
                         +|++.|.+++|+|++..+++++.|.++++||+.+.+++.++                                    
T Consensus       230 ~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d  309 (603)
T KOG0318|consen  230 DSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSD  309 (603)
T ss_pred             CCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccC
Confidence               89999999999999999999999999999999776653333                                    


Q ss_pred             -------ecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccc
Q psy16373        123 -------QAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus       123 -------~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                             .+|...|+++..++  .+|++|+.||.|.-||..++..
T Consensus       310 ~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~  354 (603)
T KOG0318|consen  310 PSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTS  354 (603)
T ss_pred             CChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccc
Confidence                   37888999999998  5999999999999999987654

>KOG0291|consensus

Probab=99.91  E-value=5.8e-23  Score=149.12  Aligned_cols=144  Identities=23%  Similarity=0.304  Sum_probs=121.2

Q ss_pred             ceEEEEecCCC-ceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          6 HRIHLRTGSAG-SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         6 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      ++..++.|+.. +.+.+|..+.+.       .+.+.++|...++++++  +|+++++|+.||.|++||..++-+..+|..
T Consensus       318 tGDWiA~g~~klgQLlVweWqsEs-------YVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFte  390 (893)
T KOG0291|consen  318 TGDWIAFGCSKLGQLLVWEWQSES-------YVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTE  390 (893)
T ss_pred             cCCEEEEcCCccceEEEEEeeccc-------eeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEecc
Confidence            45566666655 566677765443       33456799999999999  888999999999999999999999999999


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE------------------------------------------
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY------------------------------------------  120 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~------------------------------------------  120 (166)
                      |++.|+.+.|+..++.+++.+.||+|+.||+...+..+                                          
T Consensus       391 Hts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGql  470 (893)
T KOG0291|consen  391 HTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQL  470 (893)
T ss_pred             CCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCee
Confidence            99999999999999999999999999999986544322                                          


Q ss_pred             --EeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcc
Q psy16373        121 --SIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQG  156 (166)
Q Consensus       121 --~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~  156 (166)
                        .+.+|++||.+++|+|  +.|++++-|.+|++||+-..
T Consensus       471 lDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s  510 (893)
T KOG0291|consen  471 LDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSS  510 (893)
T ss_pred             eehhcCCCCcceeeEEccccCeEEeccccceEEEEEeecc
Confidence              2348999999999998  69999999999999999654

>KOG0645|consensus

Probab=99.91  E-value=4e-22  Score=129.72  Aligned_cols=147  Identities=17%  Similarity=0.292  Sum_probs=130.0

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc---ccee
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ---QLLF   78 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~---~~~~   78 (166)
                      ++.+.+++++|.|..+.+|.....+     .+.+.+++||...|.|++|  +|++|++++.|.+|-+|.+...   ++..
T Consensus        70 sp~g~~La~aSFD~t~~Iw~k~~~e-----fecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~a  144 (312)
T KOG0645|consen   70 SPHGRYLASASFDATVVIWKKEDGE-----FECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIA  144 (312)
T ss_pred             cCCCcEEEEeeccceEEEeecCCCc-----eeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEe
Confidence            5677899999999999999865332     3447789999999999999  9999999999999999999743   6678


Q ss_pred             hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc---CCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEEC
Q psy16373         79 TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV---TGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDR  153 (166)
Q Consensus        79 ~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~---~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~  153 (166)
                      .++.|...|..+.|+|...+|++++.|.+|++|+-.   ...+.+++.+|...|++++|++  ..|++++.|+++++|-.
T Consensus       145 VL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~  224 (312)
T KOG0645|consen  145 VLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRL  224 (312)
T ss_pred             eeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeee
Confidence            889999999999999999999999999999999765   4478999999999999999998  59999999999999985


Q ss_pred             Cc
Q psy16373        154 FQ  155 (166)
Q Consensus       154 ~~  155 (166)
                      .+
T Consensus       225 ~~  226 (312)
T KOG0645|consen  225 YT  226 (312)
T ss_pred             cc
Confidence            43

>KOG0318|consensus

Probab=99.91  E-value=4.9e-22  Score=139.30  Aligned_cols=162  Identities=19%  Similarity=0.294  Sum_probs=133.0

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeece---------------------------------------eeeeeeeccC
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTC---------------------------------------CKVESTRAHH   44 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~   44 (166)
                      ++.+.++++|...|.+++|+....+......                                       .-...+.+|.
T Consensus        68 SPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG~SvGei~GhS  147 (603)
T KOG0318|consen   68 SPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSGNSVGEITGHS  147 (603)
T ss_pred             CCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEecCCCccceeeccc
Confidence            5678899999999999999875422110000                                       0012245677


Q ss_pred             CceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373         45 QPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS  121 (166)
Q Consensus        45 ~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~  121 (166)
                      ..|+++.|   .+-.+++|+.|+.|.+|+-...+....++.|...|+++.|+|+|..+++.+.||.+.+||-.+++.+..
T Consensus       148 r~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~  227 (603)
T KOG0318|consen  148 RRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGE  227 (603)
T ss_pred             eeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEE
Confidence            77777777   455688888888888887777777777888999999999999999999999999999999999999999


Q ss_pred             ee---cccccEEEEEEcCC--eEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        122 IQ---AHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       122 ~~---~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      +.   +|++.|.+++|+|+  .++|++.|.++++||+.+.+.++++.+.
T Consensus       228 l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~  276 (603)
T KOG0318|consen  228 LEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMG  276 (603)
T ss_pred             ecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecC
Confidence            97   89999999999994  9999999999999999999999988764

>KOG0302|consensus

Probab=99.90  E-value=3.9e-23  Score=139.75  Aligned_cols=142  Identities=16%  Similarity=0.309  Sum_probs=117.4

Q ss_pred             EEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEccccc---ceehhcCC
Q psy16373         10 LRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQ---LLFTLHGH   83 (166)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~---~~~~~~~~   83 (166)
                      +++|.--+-+++|...... ..   ....++.+|+..|..++|   ..+.|++||.||+|+|||++.+.   .+.. +.|
T Consensus       227 LlsGDc~~~I~lw~~~~g~-W~---vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~-kAh  301 (440)
T KOG0302|consen  227 LLSGDCVKGIHLWEPSTGS-WK---VDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST-KAH  301 (440)
T ss_pred             cccCccccceEeeeeccCc-ee---ecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe-ecc
Confidence            5666666677788775522 11   122356689999999999   67889999999999999999873   3333 789


Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcC---CeeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCcc
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT---GACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQG  156 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~---~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~  156 (166)
                      .+.|+.+.|+....++++|+.||+++|||+|+   ++++..|+-|+.+|+++.|+|   ..+++++.|..|.+||+...
T Consensus       302 ~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE  380 (440)
T KOG0302|consen  302 NSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVE  380 (440)
T ss_pred             CCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeecc
Confidence            99999999999988999999999999999984   578899999999999999998   48899999999999999643

>KOG0292|consensus

Probab=99.90  E-value=4.4e-23  Score=152.20  Aligned_cols=145  Identities=19%  Similarity=0.360  Sum_probs=134.8

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      .+++..+.++--.|.|.+|+++-.       ..+..+..|.+||..++|  .+.++++|+.|-.|+||+.++.+++.++.
T Consensus        18 HP~rPwILtslHsG~IQlWDYRM~-------tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~   90 (1202)
T KOG0292|consen   18 HPKRPWILTSLHSGVIQLWDYRMG-------TLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLL   90 (1202)
T ss_pred             CCCCCEEEEeecCceeeeehhhhh-------hHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhc
Confidence            456789999999999999998643       345577899999999999  77899999999999999999999999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~  155 (166)
                      +|-+-|..+.|++...+++++++|.+|+||+..+++++..+.+|.--|.|..|+|  +.+++++.|.+|++||+.-
T Consensus        91 GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisG  166 (1202)
T KOG0292|consen   91 GHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISG  166 (1202)
T ss_pred             cccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecc
Confidence            9999999999999999999999999999999999999999999999999999999  7999999999999999864

>KOG0277|consensus

Probab=99.90  E-value=7.5e-23  Score=132.16  Aligned_cols=147  Identities=18%  Similarity=0.260  Sum_probs=127.1

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      ..++..++++|.|+.+++|+.....       -+.++.+|...|....|   .++.++++|.|+++++||++.......+
T Consensus       114 ~~~r~~~ltsSWD~TiKLW~~~r~~-------Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i  186 (311)
T KOG0277|consen  114 TVRRRIFLTSSWDGTIKLWDPNRPN-------SVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSI  186 (311)
T ss_pred             cccceeEEeeccCCceEeecCCCCc-------ceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEE
Confidence            3467788888999999999987654       34468899999999999   7899999999999999999875443448


Q ss_pred             cCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCC-eeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCc
Q psy16373         81 HGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~  155 (166)
                      ..|...+.++.|+.- .+.++||+.|+.|+.||+++- .++..+.+|.-.|..++|+|   +.|++++.|-++++||...
T Consensus       187 ~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~  266 (311)
T KOG0277|consen  187 EAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPER  266 (311)
T ss_pred             EeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEeccccc
Confidence            889999999999765 789999999999999999976 57788899999999999999   5899999999999999875


Q ss_pred             cc
Q psy16373        156 GH  157 (166)
Q Consensus       156 ~~  157 (166)
                      +.
T Consensus       267 ~d  268 (311)
T KOG0277|consen  267 QD  268 (311)
T ss_pred             ch
Confidence            43

>KOG0274|consensus

Probab=99.90  E-value=2.8e-22  Score=146.17  Aligned_cols=153  Identities=24%  Similarity=0.424  Sum_probs=135.6

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEec--CcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECV--SNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      +....+.+++.+..+..|+.....      .....+.+|.+.|.++++.  ++++++|+.|.++++||..++++...+.+
T Consensus       216 ~~~~~~~~~s~~~tl~~~~~~~~~------~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~g  289 (537)
T KOG0274|consen  216 LHDGFFKSGSDDSTLHLWDLNNGY------LILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQG  289 (537)
T ss_pred             eecCeEEecCCCceeEEeecccce------EEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecC
Confidence            345678899999999888865433      1222378999999999994  99999999999999999999999999999


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeee
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      |.+.+.++...+  ..+++|+.|.+|++|++.++..+..+.+|.++|.++..+.+.+++++.|++|++||+.+++++.++
T Consensus       290 h~stv~~~~~~~--~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~~~~lvsgs~d~~v~VW~~~~~~cl~sl  367 (537)
T KOG0274|consen  290 HTSSVRCLTIDP--FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLDEPLLVSGSYDGTVKVWDPRTGKCLKSL  367 (537)
T ss_pred             CCceEEEEEccC--ceEeeccCCceEEEEeccCcceEEEeccccccEEEEEecCCEEEEEecCceEEEEEhhhceeeeee
Confidence            999999998754  678889999999999999999999999999999999999999999999999999999999999887


Q ss_pred             eec
Q psy16373        163 QLQ  165 (166)
Q Consensus       163 ~~~  165 (166)
                      ..+
T Consensus       368 ~gH  370 (537)
T KOG0274|consen  368 SGH  370 (537)
T ss_pred             cCC
Confidence            653

>KOG0294|consensus

Probab=99.90  E-value=3.1e-22  Score=132.64  Aligned_cols=156  Identities=25%  Similarity=0.354  Sum_probs=133.5

Q ss_pred             EEEEecCCCceEEEeeccccc-----ceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEE-----EMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      ..++.|++...+.-.......     .......+.+.+..|.++|++++.++.++++|+.|-+|++||+++...+..+..
T Consensus         2 m~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~   81 (362)
T KOG0294|consen    2 MEIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVSGPYVASGSSDETIHIYDMRKRKQLGILLS   81 (362)
T ss_pred             eeEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEecceeEeccCCCCcEEEEeccchhhhcceec
Confidence            357888888887766654433     122333457778899999999999999999999999999999999999999999


Q ss_pred             CCCceEEEEEcCCCC--EEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccc
Q psy16373         83 HCGPITTLFIDGVSM--MSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~--~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      |.+.|+++.|.+...  .+++|+.||.|.+|+...++.+.++++|.+.|+.++.+|  ..-++.+.|+.+++||+-.|+.
T Consensus        82 HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~  161 (362)
T KOG0294|consen   82 HAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRV  161 (362)
T ss_pred             cccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCcc
Confidence            999999999988743  899999999999999999999999999999999999999  4678889999999999998876


Q ss_pred             eeeee
Q psy16373        159 LSTIQ  163 (166)
Q Consensus       159 ~~~~~  163 (166)
                      -+..+
T Consensus       162 a~v~~  166 (362)
T KOG0294|consen  162 AFVLN  166 (362)
T ss_pred             ceeec
Confidence            55444

>KOG0296|consensus

Probab=99.90  E-value=8.7e-22  Score=132.62  Aligned_cols=152  Identities=17%  Similarity=0.212  Sum_probs=136.5

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      +..++++||+.|..-.+|+....+       ....+.+|+..|.|+.|  ++.+|++|+.+|.|+||...++.....+..
T Consensus        74 P~~~l~aTGGgDD~AflW~~~~ge-------~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~  146 (399)
T KOG0296|consen   74 PNNNLVATGGGDDLAFLWDISTGE-------FAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQ  146 (399)
T ss_pred             CCCceEEecCCCceEEEEEccCCc-------ceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeec
Confidence            456789999999999999987654       33467799999999999  999999999999999999999988777765


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccccee
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      ..+.+.=+.|+|.+..++.|+.||.+.+|.+.+....+.+.+|..++++=.|.|  ..++++..|++|++||+++++++.
T Consensus       147 e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~  226 (399)
T KOG0296|consen  147 EVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLH  226 (399)
T ss_pred             ccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeE
Confidence            666788889999999999999999999999999888889999999999999998  489999999999999999999998


Q ss_pred             eee
Q psy16373        161 TIQ  163 (166)
Q Consensus       161 ~~~  163 (166)
                      ++.
T Consensus       227 ~~~  229 (399)
T KOG0296|consen  227 KIT  229 (399)
T ss_pred             Eec
Confidence            876

>KOG0283|consensus

Probab=99.90  E-value=1e-22  Score=148.75  Aligned_cols=162  Identities=18%  Similarity=0.179  Sum_probs=134.7

Q ss_pred             CCcccceEEEEecCCCceEEEeecccc----------------------------cc-----------------------
Q psy16373          1 MNKSVHRIHLRTGSAGSLLDFKKMQVE----------------------------EE-----------------------   29 (166)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~-----------------------   29 (166)
                      |-.+..+.+||+|+.|++|++|.....                            ..                       
T Consensus       273 mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~s~~~~~p~  352 (712)
T KOG0283|consen  273 MKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQSPCVLLPL  352 (712)
T ss_pred             EEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccCCccccCCC
Confidence            345778899999999999999998650                            00                       


Q ss_pred             --eeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCC
Q psy16373         30 --MTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQD  105 (166)
Q Consensus        30 --~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d  105 (166)
                        ..+..++...+.||.+.|..++| .+++|++++.|.+|++|++...+++..|. |.+-|+|++|+|. .++|++|+.|
T Consensus       353 ~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD  431 (712)
T KOG0283|consen  353 KAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLD  431 (712)
T ss_pred             ccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccc
Confidence              00011334457899999999999 89999999999999999999999999887 9999999999996 8999999999


Q ss_pred             CcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        106 GLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       106 ~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      +.++||++...+.+ .+..-..-|++++|.|  ...+.|+.+|.+++|+.+..+.+..+++
T Consensus       432 ~KvRiWsI~d~~Vv-~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I  491 (712)
T KOG0283|consen  432 GKVRLWSISDKKVV-DWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHI  491 (712)
T ss_pred             cceEEeecCcCeeE-eehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeE
Confidence            99999999766644 3444568899999999  4899999999999999988887776654

>KOG0310|consensus

Probab=99.90  E-value=6.1e-22  Score=137.44  Aligned_cols=152  Identities=17%  Similarity=0.281  Sum_probs=129.4

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc-cceehhc
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ-QLLFTLH   81 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~-~~~~~~~   81 (166)
                      ..+++++|++|+++++|+.....       ....+.+|++.|.|.++   ++..+++|+.||.|++||.+.. ..+.++.
T Consensus       122 d~t~l~s~sDd~v~k~~d~s~a~-------v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln  194 (487)
T KOG0310|consen  122 DNTMLVSGSDDKVVKYWDLSTAY-------VQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN  194 (487)
T ss_pred             CCeEEEecCCCceEEEEEcCCcE-------EEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec
Confidence            46799999999999999987543       23467899999999999   5668999999999999999987 5556655


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC-eeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccc
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                       |..+|..+.+-|.|..+++++. ..+++||+-+| +.+..+..|...|+|+++..  ..|++++.|+.+++||+.+.+.
T Consensus       195 -hg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kv  272 (487)
T KOG0310|consen  195 -HGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKV  272 (487)
T ss_pred             -CCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEE
Confidence             8999999999999999999864 48999999855 55555556999999999987  6999999999999999998888


Q ss_pred             eeeeeecC
Q psy16373        159 LSTIQLQG  166 (166)
Q Consensus       159 ~~~~~~~~  166 (166)
                      +..+..++
T Consensus       273 v~s~~~~~  280 (487)
T KOG0310|consen  273 VHSWKYPG  280 (487)
T ss_pred             EEeeeccc
Confidence            88877653

>KOG0289|consensus

Probab=99.90  E-value=5.7e-22  Score=136.24  Aligned_cols=152  Identities=21%  Similarity=0.354  Sum_probs=131.9

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC--
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG--   82 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~--   82 (166)
                      ...+++++.+..+++|.......       ......|..+|+.+..  .+++|+++++|++....|++++..+.....  
T Consensus       273 ~~~v~~aSad~~i~vws~~~~s~-------~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~  345 (506)
T KOG0289|consen  273 LDTVITASADEIIRVWSVPLSSE-------PTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDET  345 (506)
T ss_pred             hhheeecCCcceEEeeccccccC-------ccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeecc
Confidence            34678899999999999765432       2234589999999998  899999999999999999999988765543  


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCccccee
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      ..-.+++.+|||||..|++|..|+.+++||+.++..+..|.+|.++|..++|+.+  +|++++.|+.|++||+|.-+..+
T Consensus       346 s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~k  425 (506)
T KOG0289|consen  346 SDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFK  425 (506)
T ss_pred             ccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccc
Confidence            2345899999999999999999999999999999999999999999999999985  89999999999999999998888


Q ss_pred             eeeec
Q psy16373        161 TIQLQ  165 (166)
Q Consensus       161 ~~~~~  165 (166)
                      +|+.+
T Consensus       426 t~~l~  430 (506)
T KOG0289|consen  426 TIQLD  430 (506)
T ss_pred             eeecc
Confidence            88764

>KOG0305|consensus

Probab=99.89  E-value=3.3e-22  Score=142.12  Aligned_cols=154  Identities=19%  Similarity=0.335  Sum_probs=136.8

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeec-cCCceEEEEecCcEEEEEecCCeEEEEEcccccceeh-hc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRA-HHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFT-LH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~-~~   81 (166)
                      +..+.+|+.|..++.+.+|+.....       .+..+.+ |...|.+++|.+..+.+|+.|+.|..+|++..+.... +.
T Consensus       226 s~~G~~LavG~~~g~v~iwD~~~~k-------~~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~~~~  298 (484)
T KOG0305|consen  226 SPDGSHLAVGTSDGTVQIWDVKEQK-------KTRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVSTLQ  298 (484)
T ss_pred             CCCCCEEEEeecCCeEEEEehhhcc-------ccccccCCcCceeEEEeccCceEEEecCCCcEEEEEEecchhhhhhhh
Confidence            3468899999999999999976543       3335556 9999999999999999999999999999998766655 88


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC---CeEEEeec--CCcEEEEECCcc
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD---SYVISLGQ--DERLCVWDRFQG  156 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~--d~~i~~wd~~~~  156 (166)
                      +|...|..+.|++++.++++|+.|..+.|||.....++..+..|.+.|-+++|+|   +.|++|+.  |+.|++||..++
T Consensus       299 ~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g  378 (484)
T KOG0305|consen  299 GHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTG  378 (484)
T ss_pred             cccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCC
Confidence            9999999999999999999999999999999988899999999999999999999   58888875  999999999999


Q ss_pred             cceeeeee
Q psy16373        157 HLLSTIQL  164 (166)
Q Consensus       157 ~~~~~~~~  164 (166)
                      ..+..+..
T Consensus       379 ~~i~~vdt  386 (484)
T KOG0305|consen  379 ARIDSVDT  386 (484)
T ss_pred             cEeccccc
Confidence            98877654

>KOG0308|consensus

Probab=99.89  E-value=5.4e-22  Score=142.04  Aligned_cols=154  Identities=19%  Similarity=0.301  Sum_probs=134.3

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEccccc--cee---
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQ--LLF---   78 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~--~~~---   78 (166)
                      +..++++|.|..+++|+.....     .....++..|.++|.|+++   +..++++|+.|+.|.+||+.++.  .+.   
T Consensus        85 ~~tlIS~SsDtTVK~W~~~~~~-----~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n  159 (735)
T KOG0308|consen   85 GKTLISASSDTTVKVWNAHKDN-----TFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFN  159 (735)
T ss_pred             CCceEEecCCceEEEeecccCc-----chhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhcc
Confidence            3478999999999999986553     1234467789999999999   77889999999999999999762  222   


Q ss_pred             -----hhc-CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEE
Q psy16373         79 -----TLH-GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCV  150 (166)
Q Consensus        79 -----~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~  150 (166)
                           .+. ++...|.+++.++.+..+++|+..+.+++||.++.+.+-.+++|+..|..+..++  ..+++++.|++|++
T Consensus       160 ~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrl  239 (735)
T KOG0308|consen  160 NVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRL  239 (735)
T ss_pred             ccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEe
Confidence                 223 7888999999999999999999999999999999999999999999999999988  48999999999999


Q ss_pred             EECCcccceeeeeec
Q psy16373        151 WDRFQGHLLSTIQLQ  165 (166)
Q Consensus       151 wd~~~~~~~~~~~~~  165 (166)
                      ||+...+++.++.++
T Consensus       240 WdLgqQrCl~T~~vH  254 (735)
T KOG0308|consen  240 WDLGQQRCLATYIVH  254 (735)
T ss_pred             eeccccceeeeEEec
Confidence            999999999998875

>KOG0282|consensus

Probab=99.89  E-value=7.9e-23  Score=141.74  Aligned_cols=150  Identities=19%  Similarity=0.276  Sum_probs=134.0

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      ...+|++|+.|+.+++|+.-...      ..++++.+|..+|..++|  .+..+++++-|+.+++||.++|+.+..+. -
T Consensus       226 ~~hLlLS~gmD~~vklW~vy~~~------~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~-~  298 (503)
T KOG0282|consen  226 KGHLLLSGGMDGLVKLWNVYDDR------RCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFH-L  298 (503)
T ss_pred             eeeEEEecCCCceEEEEEEecCc------ceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEe-c
Confidence            46789999999999999975432      467788999999999999  88999999999999999999999998876 3


Q ss_pred             CCceEEEEEcCCC-CEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccccee
Q psy16373         84 CGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus        84 ~~~v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      ...++|+.++|++ +.+++|+.|+.|+.||+|+++.++.+..|-++|..+.|-+  ..+++.+.|+.+++|+.+.+.+++
T Consensus       299 ~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik  378 (503)
T KOG0282|consen  299 DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIK  378 (503)
T ss_pred             CCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccch
Confidence            4568999999996 8999999999999999999999999998999999999987  589999999999999999887765


Q ss_pred             ee
Q psy16373        161 TI  162 (166)
Q Consensus       161 ~~  162 (166)
                      .+
T Consensus       379 ~i  380 (503)
T KOG0282|consen  379 NI  380 (503)
T ss_pred             hh
Confidence            43

>KOG0292|consensus

Probab=99.89  E-value=4.6e-22  Score=146.92  Aligned_cols=153  Identities=14%  Similarity=0.206  Sum_probs=130.7

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      .++..+|++|++|-.|++|.+...       ..+.++.||.+.|..+.|  .-..|+++|.|.+|++|+.++.+++..+.
T Consensus        60 H~~qplFVSGGDDykIkVWnYk~r-------rclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavlt  132 (1202)
T KOG0292|consen   60 HPTQPLFVSGGDDYKIKVWNYKTR-------RCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLT  132 (1202)
T ss_pred             cCCCCeEEecCCccEEEEEecccc-------eehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEe
Confidence            356789999999999999998654       356688899999999999  55679999999999999999999999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe-----e--------------------------------------
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA-----C--------------------------------------  118 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~-----~--------------------------------------  118 (166)
                      +|.--|.|.+|+|....+++++.|.+|++||+..-+     +                                      
T Consensus       133 GHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwa  212 (1202)
T KOG0292|consen  133 GHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWA  212 (1202)
T ss_pred             cCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceE
Confidence            999999999999999999999999999999984110     0                                      


Q ss_pred             ------------------------------eEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373        119 ------------------------------MYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       119 ------------------------------~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                                                    +-+.++|...|.++.|+|  +.+++.++|++|++||+...+.++++.
T Consensus       213 AfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfr  289 (1202)
T KOG0292|consen  213 AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFR  289 (1202)
T ss_pred             EecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeee
Confidence                                          111136778888999998  789999999999999998888888775

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.89  E-value=4.3e-21  Score=147.56  Aligned_cols=141  Identities=14%  Similarity=0.236  Sum_probs=121.1

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      +..+++++.|+.+++|+.....       .+..+.+|...|.+++|   ++.+|++|+.|+.|++||+.++..+..+..+
T Consensus       545 ~~~las~~~Dg~v~lWd~~~~~-------~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~  617 (793)
T PLN00181        545 KSQVASSNFEGVVQVWDVARSQ-------LVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK  617 (793)
T ss_pred             CCEEEEEeCCCeEEEEECCCCe-------EEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC
Confidence            5679999999999999976432       34456789999999999   4678999999999999999988887777644


Q ss_pred             CCceEEEEEc-CCCCEEEEecCCCcEEEEeCcCCe-eeEEeecccccEEEEEEcC-CeEEEeecCCcEEEEECCc
Q psy16373         84 CGPITTLFID-GVSMMSGSGSQDGLLCVWDTVTGA-CMYSIQAHDGCIHALTYSD-SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        84 ~~~v~~~~~~-~~~~~~~~~~~d~~v~~~d~~~~~-~~~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~  155 (166)
                       ..+.++.|+ +++..+++|+.|+.|++||+++.+ ++..+.+|...|..+.|.+ ..+++++.|+.|++||++.
T Consensus       618 -~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~  691 (793)
T PLN00181        618 -ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSM  691 (793)
T ss_pred             -CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCC
Confidence             678999995 469999999999999999998765 5677889999999999976 6899999999999999975

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.88  E-value=9.6e-21  Score=145.68  Aligned_cols=151  Identities=12%  Similarity=0.168  Sum_probs=121.8

Q ss_pred             cceEEEEecCCCceEEEeecccccce-eeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEM-TLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      ..+.++++|+.|+.+++|+....... .....+...+. +...+.+++|   .+.+|++++.|+.|++||+.+++.+..+
T Consensus       493 ~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~  571 (793)
T PLN00181        493 RDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEM  571 (793)
T ss_pred             CCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence            34668999999999999986432100 00001111222 3457889999   4688999999999999999999988899


Q ss_pred             cCCCCceEEEEEcC-CCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCcc
Q psy16373         81 HGHCGPITTLFIDG-VSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQG  156 (166)
Q Consensus        81 ~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~  156 (166)
                      .+|...|.+++|+| ++.++++|+.|+.|++||++++..+..+..+ ..+.++.|++   ..+++|+.|+.|++||++++
T Consensus       572 ~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~  650 (793)
T PLN00181        572 KEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNP  650 (793)
T ss_pred             cCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence            99999999999997 6899999999999999999999888888754 6788999964   58999999999999999876


Q ss_pred             c
Q psy16373        157 H  157 (166)
Q Consensus       157 ~  157 (166)
                      +
T Consensus       651 ~  651 (793)
T PLN00181        651 K  651 (793)
T ss_pred             C
Confidence            5

>KOG0265|consensus

Probab=99.88  E-value=1.3e-21  Score=128.87  Aligned_cols=127  Identities=20%  Similarity=0.269  Sum_probs=113.0

Q ss_pred             eeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccc-ccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEe
Q psy16373         36 KVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLED-QQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWD  112 (166)
Q Consensus        36 ~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d  112 (166)
                      +...+.+|.+.|+.+.|  ++..|++|+.|..|.+|++.. -+-...+++|.++|..+.+.++++.+++++.|.+++.||
T Consensus        39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD  118 (338)
T KOG0265|consen   39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWD  118 (338)
T ss_pred             hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEe
Confidence            44456799999999999  899999999999999999653 355567789999999999999999999999999999999


Q ss_pred             CcCCeeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCcccceeee
Q psy16373        113 TVTGACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       113 ~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      .++++.++.+++|...|+.+..+.   ..+.+++.|+++++||+|+...++++
T Consensus       119 ~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~  171 (338)
T KOG0265|consen  119 AETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTF  171 (338)
T ss_pred             cccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcc
Confidence            999999999999999999887543   47888889999999999988877766

>KOG0282|consensus

Probab=99.88  E-value=7.1e-23  Score=141.98  Aligned_cols=128  Identities=20%  Similarity=0.362  Sum_probs=117.2

Q ss_pred             eeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEccc-ccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEE
Q psy16373         35 CKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLED-QQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCV  110 (166)
Q Consensus        35 ~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~  110 (166)
                      ..+.++.+|+..|.++.|   .+.+|++++.|+.|+||++.. +++++++.+|..+|.+++|+++|..+++++.|+.+++
T Consensus       205 k~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKl  284 (503)
T KOG0282|consen  205 KLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKL  284 (503)
T ss_pred             hheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeee
Confidence            456778899999999999   678999999999999999987 7899999999999999999999999999999999999


Q ss_pred             EeCcCCeeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCcccceeeee
Q psy16373        111 WDTVTGACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       111 ~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      ||+++|.++..+.. ...++++.|+|   +.+++|+.|+.|+.||+|+++.++++.
T Consensus       285 wDtETG~~~~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd  339 (503)
T KOG0282|consen  285 WDTETGQVLSRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYD  339 (503)
T ss_pred             eccccceEEEEEec-CCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHH
Confidence            99999999999874 56789999998   489999999999999999999887654

>KOG0294|consensus

Probab=99.88  E-value=4.6e-21  Score=127.19  Aligned_cols=145  Identities=22%  Similarity=0.369  Sum_probs=120.7

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-c---CcEEEEEecCCeEEEEEcccccceehh
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-V---SNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~---~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      ..+..+++|+.|..|.+++++...+       ...+-.|.+.|+++.| .   .+.|++|+.||.|.+|+....+.+..+
T Consensus        51 Vs~~~~aSGssDetI~IYDm~k~~q-------lg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~sl  123 (362)
T KOG0294|consen   51 VSGPYVASGSSDETIHIYDMRKRKQ-------LGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSL  123 (362)
T ss_pred             ecceeEeccCCCCcEEEEeccchhh-------hcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeee
Confidence            3578899999999999999876542       3355688999999999 2   237999999999999999999999999


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee------------------------------------------
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC------------------------------------------  118 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~------------------------------------------  118 (166)
                      ++|...|+.++++|.+...++-+.|+.+++||+-+++.                                          
T Consensus       124 K~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~  203 (362)
T KOG0294|consen  124 KAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFR  203 (362)
T ss_pred             cccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhh
Confidence            99999999999999999999999999999998844431                                          


Q ss_pred             --------------------------------------eEEeecccccEEEEEEcC----CeEEEeecCCcEEEEECCcc
Q psy16373        119 --------------------------------------MYSIQAHDGCIHALTYSD----SYVISLGQDERLCVWDRFQG  156 (166)
Q Consensus       119 --------------------------------------~~~~~~~~~~v~~i~~~~----~~l~~~~~d~~i~~wd~~~~  156 (166)
                                                            +..+.+|+..|-++.+-.    .+|+|++.||.|++||++..
T Consensus       204 ~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~  283 (362)
T KOG0294|consen  204 EIENPKRILCATFLDGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME  283 (362)
T ss_pred             hhhccccceeeeecCCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence                                                  223336777888877532    38999999999999999876

>KOG0643|consensus

Probab=99.88  E-value=6.3e-21  Score=124.14  Aligned_cols=152  Identities=22%  Similarity=0.205  Sum_probs=129.5

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehh---
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTL---   80 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~---   80 (166)
                      .+-+|.+++.|....+|-.-..       ..+.++.+|.+.|+|+..  +...+++|+.|.++++||+++|+.+..+   
T Consensus        21 eGDLlFscaKD~~~~vw~s~nG-------erlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~   93 (327)
T KOG0643|consen   21 EGDLLFSCAKDSTPTVWYSLNG-------ERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTN   93 (327)
T ss_pred             CCcEEEEecCCCCceEEEecCC-------ceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecC
Confidence            4668999999999988875333       356688999999999999  7889999999999999999977654433   


Q ss_pred             --------------------------------------------------cCCCCceEEEEEcCCCCEEEEecCCCcEEE
Q psy16373         81 --------------------------------------------------HGHCGPITTLFIDGVSMMSGSGSQDGLLCV  110 (166)
Q Consensus        81 --------------------------------------------------~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~  110 (166)
                                                                        ..+.+.++..-|.|-+..+++|.+||.|..
T Consensus        94 ~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~  173 (327)
T KOG0643|consen   94 SPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISI  173 (327)
T ss_pred             CeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEE
Confidence                                                              234456788889999999999999999999


Q ss_pred             EeCcCC-eeeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCcccceeeeee
Q psy16373        111 WDTVTG-ACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       111 ~d~~~~-~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ||++++ +.+.+-+.|...|+.+.++++  +++|++.|.+-++||.++-+.++++..
T Consensus       174 ~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~t  230 (327)
T KOG0643|consen  174 YDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTT  230 (327)
T ss_pred             EEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeee
Confidence            999998 555666889999999999994  999999999999999999999988865

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.88  E-value=4e-20  Score=125.33  Aligned_cols=152  Identities=24%  Similarity=0.452  Sum_probs=129.1

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      ..+..+++++.++.+.+|+.....       ....+..|...+.++.|  +++.+++++.++.+++|++.+++....+..
T Consensus        19 ~~~~~l~~~~~~g~i~i~~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~   91 (289)
T cd00200          19 PDGKLLATGSGDGTIKVWDLETGE-------LLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTG   91 (289)
T ss_pred             CCCCEEEEeecCcEEEEEEeeCCC-------cEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEec
Confidence            345678888889999999876443       23345678888989999  566999999999999999998888888888


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccccee
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      |...+.++.+++++..+++++.++.+.+||+++++....+..|...+.++.|+|  .++++++.|+.|++||+++++.+.
T Consensus        92 ~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~  171 (289)
T cd00200          92 HTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVA  171 (289)
T ss_pred             cCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccce
Confidence            988999999999988998888899999999998998888888999999999999  366666669999999999888777


Q ss_pred             eee
Q psy16373        161 TIQ  163 (166)
Q Consensus       161 ~~~  163 (166)
                      .+.
T Consensus       172 ~~~  174 (289)
T cd00200         172 TLT  174 (289)
T ss_pred             eEe
Confidence            665

>KOG0313|consensus

Probab=99.87  E-value=1.1e-20  Score=127.94  Aligned_cols=150  Identities=23%  Similarity=0.344  Sum_probs=126.8

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cC---cEEEEEecCCeEEEEEcccccc----e
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VS---NRVITGSQDHTLKVYKLEDQQL----L   77 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~---~~l~~~~~d~~v~v~~~~~~~~----~   77 (166)
                      .-.+++|++|+++++|+....        ...++.+|.++|.++++  .+   ..|++++.|.++++|-.+.++.    +
T Consensus       115 ~~~IltgsYDg~~riWd~~Gk--------~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~  186 (423)
T KOG0313|consen  115 SKWILTGSYDGTSRIWDLKGK--------SIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKAL  186 (423)
T ss_pred             CceEEEeecCCeeEEEecCCc--------eEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHH
Confidence            568999999999999997543        33466799999998888  22   3599999999999999987643    3


Q ss_pred             ehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc-------------------------CCeeeEEeecccccEEEE
Q psy16373         78 FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV-------------------------TGACMYSIQAHDGCIHAL  132 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~-------------------------~~~~~~~~~~~~~~v~~i  132 (166)
                      ...++|...|.++...+++..+++|+.|.++.+|+..                         ++.++-.+.+|+++|.++
T Consensus       187 ~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V  266 (423)
T KOG0313|consen  187 KVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSV  266 (423)
T ss_pred             hHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeE
Confidence            4456999999999999999999999999999999831                         123567788999999999


Q ss_pred             EEcC-CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        133 TYSD-SYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       133 ~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .|++ ..+++++.|.+|+.||+.++..+.++..
T Consensus       267 ~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~~  299 (423)
T KOG0313|consen  267 VWSDATVIYSVSWDHTIKVWDLETGGLKSTLTT  299 (423)
T ss_pred             EEcCCCceEeecccceEEEEEeecccceeeeec
Confidence            9998 7999999999999999999998877654

>KOG0264|consensus

Probab=99.87  E-value=2.6e-21  Score=133.10  Aligned_cols=158  Identities=18%  Similarity=0.255  Sum_probs=129.9

Q ss_pred             ceEEEEecCCCceEEEeecccccceee---ceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEccccc----
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTL---TCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQ----   75 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~----   75 (166)
                      .+..+++++.++-+.+|+.........   .+.+...+.+|...-.+++|   ....|++++.|+.|++||+....    
T Consensus       136 np~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~  215 (422)
T KOG0264|consen  136 NPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDK  215 (422)
T ss_pred             CCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCc
Confidence            466888999999999999866543332   44566678899987788999   56789999999999999997542    


Q ss_pred             ---ceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCc--CCeeeEEeecccccEEEEEEcC---CeEEEeecCC
Q psy16373         76 ---LLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTV--TGACMYSIQAHDGCIHALTYSD---SYVISLGQDE  146 (166)
Q Consensus        76 ---~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~--~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~  146 (166)
                         +...+.+|...|..++|++. ...|++++.|+.+.|||+|  +.++.....+|.++|++++|+|   ..|+||+.|+
T Consensus       216 ~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~  295 (422)
T KOG0264|consen  216 VVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADK  295 (422)
T ss_pred             cccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCC
Confidence               34557789999999999987 7789999999999999999  5667777889999999999999   4899999999


Q ss_pred             cEEEEECCccc-ceeeee
Q psy16373        147 RLCVWDRFQGH-LLSTIQ  163 (166)
Q Consensus       147 ~i~~wd~~~~~-~~~~~~  163 (166)
                      +|.+||+|+-. ++.++.
T Consensus       296 tV~LwDlRnL~~~lh~~e  313 (422)
T KOG0264|consen  296 TVALWDLRNLNKPLHTFE  313 (422)
T ss_pred             cEEEeechhcccCceecc
Confidence            99999999854 444443

>KOG0640|consensus

Probab=99.87  E-value=3.4e-21  Score=128.01  Aligned_cols=162  Identities=22%  Similarity=0.386  Sum_probs=131.1

Q ss_pred             ccceEEEEecCCCceEEEeecc------cccc-----eeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEE
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQ------VEEE-----MTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYK   70 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~------~~~~-----~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~   70 (166)
                      +..+.++++|+.|-.|++.+.+      ...+     .......++++..|..+|+++.|  ....|++|+.|++|+++|
T Consensus       121 s~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFD  200 (430)
T KOG0640|consen  121 SPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFD  200 (430)
T ss_pred             CCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEeccCCCeEEEEe
Confidence            5568899999999999998875      1111     12223567888999999999999  667899999999999999


Q ss_pred             ccccc------------ceeh-----------------------------------hcCCCCceEEEEEcCCCCEEEEec
Q psy16373         71 LEDQQ------------LLFT-----------------------------------LHGHCGPITTLFIDGVSMMSGSGS  103 (166)
Q Consensus        71 ~~~~~------------~~~~-----------------------------------~~~~~~~v~~~~~~~~~~~~~~~~  103 (166)
                      +....            +++.                                   -..|.+.|+++.+++.+++.++++
T Consensus       201 fsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaS  280 (430)
T KOG0640|consen  201 FSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTAS  280 (430)
T ss_pred             cccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEec
Confidence            96321            0000                                   035788899999999999999999


Q ss_pred             CCCcEEEEeCcCCeeeEEee-ccc-ccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        104 QDGLLCVWDTVTGACMYSIQ-AHD-GCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       104 ~d~~v~~~d~~~~~~~~~~~-~~~-~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      .||.|++||--+++++.++. +|. +.|.+..|..  .++++.+.|..+++|.+.+++++..+..-
T Consensus       281 kDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGA  346 (430)
T KOG0640|consen  281 KDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGA  346 (430)
T ss_pred             cCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecC
Confidence            99999999998999988874 454 4788899987  59999999999999999999999887643

>KOG0269|consensus

Probab=99.87  E-value=3.4e-21  Score=140.20  Aligned_cols=145  Identities=16%  Similarity=0.244  Sum_probs=121.4

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc-cceeh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ-QLLFT   79 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~-~~~~~   79 (166)
                      +..++++++|+.|+.++.|++......       .++.+....|..+.|   .++.++++...|.+++||++.. ++...
T Consensus       143 ~tep~iliSGSQDg~vK~~DlR~~~S~-------~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k  215 (839)
T KOG0269|consen  143 STEPNILISGSQDGTVKCWDLRSKKSK-------STFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKK  215 (839)
T ss_pred             cCCccEEEecCCCceEEEEeeeccccc-------ccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHH
Confidence            456889999999999999999765422       244567788999999   7889999999999999999864 56678


Q ss_pred             hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee--eEEeecccccEEEEEEcC---CeEEEeec--CCcEEEEE
Q psy16373         80 LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC--MYSIQAHDGCIHALTYSD---SYVISLGQ--DERLCVWD  152 (166)
Q Consensus        80 ~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~--~~~~~~~~~~v~~i~~~~---~~l~~~~~--d~~i~~wd  152 (166)
                      +.+|.++|.|+.|+|++.++|||+.|+.++|||+.+++.  +.++. -..+|..++|-|   .+|++++.  |-.|++||
T Consensus       216 ~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWD  294 (839)
T KOG0269|consen  216 LTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWD  294 (839)
T ss_pred             hhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEe
Confidence            889999999999999999999999999999999986643  33333 257999999998   37888875  78899999


Q ss_pred             CCcc
Q psy16373        153 RFQG  156 (166)
Q Consensus       153 ~~~~  156 (166)
                      ++.+
T Consensus       295 vrRP  298 (839)
T KOG0269|consen  295 VRRP  298 (839)
T ss_pred             eccc
Confidence            9754

>KOG0306|consensus

Probab=99.87  E-value=6.5e-21  Score=138.60  Aligned_cols=163  Identities=22%  Similarity=0.287  Sum_probs=139.2

Q ss_pred             CcccceEEEEecCCCceEEEeecccccceeeceeeeeee-----eccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc
Q psy16373          2 NKSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVEST-----RAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ   74 (166)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~   74 (166)
                      ..++.+..+++|+.|..+++|+.......+....+.-.+     -.-...|.|+++  ++.+|+.+-.|.+|++|-+.+-
T Consensus       461 ~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtl  540 (888)
T KOG0306|consen  461 SLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTL  540 (888)
T ss_pred             eecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecce
Confidence            456678889999999999999986544322221111111     123467899999  7999999999999999999999


Q ss_pred             cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEE
Q psy16373         75 QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWD  152 (166)
Q Consensus        75 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd  152 (166)
                      +....+.+|.-||.|+.++|++..++||+.|..|++|-+.-|.+-.++.+|..+|.++.|-|  ..+++|+.|+.|+-||
T Consensus       541 KFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWD  620 (888)
T KOG0306|consen  541 KFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWD  620 (888)
T ss_pred             eeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeec
Confidence            99999999999999999999999999999999999999999999999999999999999999  4889999999999999


Q ss_pred             CCcccceeeeee
Q psy16373        153 RFQGHLLSTIQL  164 (166)
Q Consensus       153 ~~~~~~~~~~~~  164 (166)
                      -...+.++++..
T Consensus       621 g~kFe~iq~L~~  632 (888)
T KOG0306|consen  621 GEKFEEIQKLDG  632 (888)
T ss_pred             hhhhhhheeecc
Confidence            988888887764

>KOG1332|consensus

Probab=99.87  E-value=6.6e-21  Score=122.64  Aligned_cols=150  Identities=13%  Similarity=0.190  Sum_probs=125.1

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe----cCcEEEEEecCCeEEEEEccccc--ce
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC----VSNRVITGSQDHTLKVYKLEDQQ--LL   77 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~d~~v~v~~~~~~~--~~   77 (166)
                      .+.+.+++|+++|+.++++......+    ...+.++.+|.+||..++|    -|++|++++.||.|.+|.-++++  ..
T Consensus        20 DyygkrlATcsSD~tVkIf~v~~n~~----s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~   95 (299)
T KOG1332|consen   20 DYYGKRLATCSSDGTVKIFEVRNNGQ----SKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKA   95 (299)
T ss_pred             hhhcceeeeecCCccEEEEEEcCCCC----ceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhh
Confidence            45678999999999999998876553    3456688999999999999    57899999999999999998874  34


Q ss_pred             ehhcCCCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCC---eeeEEeecccccEEEEEEcCC---------------
Q psy16373         78 FTLHGHCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTG---ACMYSIQAHDGCIHALTYSDS---------------  137 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~---~~~~~~~~~~~~v~~i~~~~~---------------  137 (166)
                      .....|...|++++|.|.  |-.|+.++.||.|.+.+.++.   ........|+-.|+++.|.|.               
T Consensus        96 ~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~  175 (299)
T KOG1332|consen   96 YEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKV  175 (299)
T ss_pred             hhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCccccc
Confidence            556679999999999887  778899999999999988754   222334678999999999762               


Q ss_pred             -eEEEeecCCcEEEEECCccc
Q psy16373        138 -YVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       138 -~l~~~~~d~~i~~wd~~~~~  157 (166)
                       .|++|+.|..|++|+..+++
T Consensus       176 krlvSgGcDn~VkiW~~~~~~  196 (299)
T KOG1332|consen  176 KRLVSGGCDNLVKIWKFDSDS  196 (299)
T ss_pred             ceeeccCCccceeeeecCCcc
Confidence             49999999999999988764

>KOG0308|consensus

Probab=99.87  E-value=1.1e-20  Score=135.38  Aligned_cols=152  Identities=18%  Similarity=0.269  Sum_probs=133.1

Q ss_pred             ceEEEEecCCCceEEEeecccccc---eeeceeeeeeee-ccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceeh
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEE---MTLTCCKVESTR-AHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFT   79 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~   79 (166)
                      ...++|+|+-|+.|.+|+.+....   ..........+. ++..+|.+++.  .+..|++|+..+.+++||.++.+.+-.
T Consensus       129 ~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimk  208 (735)
T KOG0308|consen  129 NNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMK  208 (735)
T ss_pred             CceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceee
Confidence            456899999999999999975522   112223333444 88999999999  556899999999999999999999999


Q ss_pred             hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373         80 LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        80 ~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      +++|+..|.++..+++|..+++++.||+|++||+...+++.++..|+..|+++..+|  .++++|+.|+.|..=|+++..
T Consensus       209 LrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~  288 (735)
T KOG0308|consen  209 LRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPA  288 (735)
T ss_pred             eeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCch
Confidence            999999999999999999999999999999999999999999999999999999998  599999999999999998853

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.87  E-value=5.1e-20  Score=124.84  Aligned_cols=149  Identities=25%  Similarity=0.438  Sum_probs=127.8

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      ...+++++.++.+.+|+.....       ....+..|...+.++.|  ++.++++++.++.+.+||+.+++....+..|.
T Consensus        63 ~~~l~~~~~~~~i~i~~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  135 (289)
T cd00200          63 GTYLASGSSDKTIRLWDLETGE-------CVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHT  135 (289)
T ss_pred             CCEEEEEcCCCeEEEEEcCccc-------ceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCC
Confidence            3478888889999999986532       23345678889999999  44677777779999999999888888888899


Q ss_pred             CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCcccceeee
Q psy16373         85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      ..+.+++++|++.++++++.++.+++||+++++.+..+..|...+.++.|+|+  .+++++.|+.|++||+++++.+..+
T Consensus       136 ~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~  215 (289)
T cd00200         136 DWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTL  215 (289)
T ss_pred             CcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecch
Confidence            99999999999889988888999999999999988888888889999999995  8889999999999999988777665

>KOG1407|consensus

Probab=99.86  E-value=7.9e-21  Score=123.28  Aligned_cols=156  Identities=19%  Similarity=0.260  Sum_probs=134.9

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEccccc-------
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQ-------   75 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~-------   75 (166)
                      .+..+++|+.|+.+.+|......     ..+.....+|.+.|-.++|   .++.+++++.|..|++||++.++       
T Consensus        31 ~g~~lasgs~dktv~v~n~e~~r-----~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~  105 (313)
T KOG1407|consen   31 DGTKLASGSFDKTVSVWNLERDR-----FRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIET  105 (313)
T ss_pred             cCceeeecccCCceEEEEecchh-----hhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeec
Confidence            46789999999999999986542     2333456799999999999   78899999999999999998333       


Q ss_pred             ---------------------------------------------------------------------------ceehh
Q psy16373         76 ---------------------------------------------------------------------------LLFTL   80 (166)
Q Consensus        76 ---------------------------------------------------------------------------~~~~~   80 (166)
                                                                                                 ++..+
T Consensus       106 ~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si  185 (313)
T KOG1407|consen  106 KGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSI  185 (313)
T ss_pred             cCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEecccccccccc
Confidence                                                                                       33444


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccc
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      ++|.....|+.|+|+|+++++|+.|-.+.+||+...-+++.+.-+.-+|..+.|+-  .+|+++++|..|-|=++.+|..
T Consensus       186 ~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~  265 (313)
T KOG1407|consen  186 KAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDR  265 (313)
T ss_pred             ccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCe
Confidence            77888889999999999999999999999999998889999988999999999986  5999999999999999999999


Q ss_pred             eeeeeecC
Q psy16373        159 LSTIQLQG  166 (166)
Q Consensus       159 ~~~~~~~~  166 (166)
                      +.++++.+
T Consensus       266 ~~eI~~~~  273 (313)
T KOG1407|consen  266 VWEIPCEG  273 (313)
T ss_pred             EEEeeccC
Confidence            99998754

>KOG0300|consensus

Probab=99.86  E-value=5.4e-21  Score=127.57  Aligned_cols=162  Identities=19%  Similarity=0.258  Sum_probs=134.8

Q ss_pred             ccceEEEEecCCCceEEEeeccccccee---------------------------------eceeeeeeeeccCCceEEE
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMT---------------------------------LTCCKVESTRAHHQPITVL   50 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~i~~~   50 (166)
                      .+.+.++++++.|+.-.+|....+.+.+                                 .-..++-.+.+|.+.|.+.
T Consensus       199 h~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~  278 (481)
T KOG0300|consen  199 HNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSAC  278 (481)
T ss_pred             ccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEeh
Confidence            4567789999999998888731110000                                 0112344567899999999


Q ss_pred             Ee--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC-eeeEEeecccc
Q psy16373         51 EC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDG  127 (166)
Q Consensus        51 ~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~  127 (166)
                      .|  .++.+++++-|.+..+||+++++.+..+.+|....+.++-+|..+++++.+.|.+.++||++.. ..+..|++|..
T Consensus       279 dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtd  358 (481)
T KOG0300|consen  279 DWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTD  358 (481)
T ss_pred             hhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeeccccc
Confidence            99  8899999999999999999999999999999999999999999999999999999999999844 55778999999


Q ss_pred             cEEEEEEcC-CeEEEeecCCcEEEEECCccc-ceeeeeec
Q psy16373        128 CIHALTYSD-SYVISLGQDERLCVWDRFQGH-LLSTIQLQ  165 (166)
Q Consensus       128 ~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~  165 (166)
                      .|+++.|+. +.+++++.|.+|++||+++.+ ++.+|..+
T Consensus       359 tVTS~vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIRtd  398 (481)
T KOG0300|consen  359 TVTSVVFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIRTD  398 (481)
T ss_pred             ceeEEEEecCCceeecCCCceEEEeeeccccCcceeeecC
Confidence            999999997 699999999999999999864 56666543

>KOG0296|consensus

Probab=99.86  E-value=7.4e-20  Score=123.42  Aligned_cols=156  Identities=21%  Similarity=0.274  Sum_probs=130.2

Q ss_pred             cccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          3 KSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      .+..+.+++||.-++.+.+|........       .++...-..|.-+.|  .+..|+.|+.||.+-+|.+.++...+.+
T Consensus       114 FshdgtlLATGdmsG~v~v~~~stg~~~-------~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~  186 (399)
T KOG0296|consen  114 FSHDGTLLATGDMSGKVLVFKVSTGGEQ-------WKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVM  186 (399)
T ss_pred             EccCceEEEecCCCccEEEEEcccCceE-------EEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEe
Confidence            3677899999999999999998765421       122223345566666  6788999999999999999998888889


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee-------------------------------------
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ-------------------------------------  123 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~-------------------------------------  123 (166)
                      .+|..++++=.|.|+|+.++++..||+|++||++++.++..+.                                     
T Consensus       187 ~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgK  266 (399)
T KOG0296|consen  187 SGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGK  266 (399)
T ss_pred             cCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccce
Confidence            9999999999999999999999999999999998887643331                                     


Q ss_pred             ----------------------------------------------------------cccccEEEEEEcC-CeEEEeec
Q psy16373        124 ----------------------------------------------------------AHDGCIHALTYSD-SYVISLGQ  144 (166)
Q Consensus       124 ----------------------------------------------------------~~~~~v~~i~~~~-~~l~~~~~  144 (166)
                                                                                .|..+|+.+.|-+ ++|++++.
T Consensus       267 Vv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~t~~l~t~c~  346 (399)
T KOG0296|consen  267 VVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLNTDYLLTACA  346 (399)
T ss_pred             EEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheeccCCCceEEEEEcCcchheeecc
Confidence                                                                      5677899999988 79999999


Q ss_pred             CCcEEEEECCcccceeeeeec
Q psy16373        145 DERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       145 d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      +|.|+.||.|+|+.+.++..+
T Consensus       347 ~g~v~~wDaRtG~l~~~y~GH  367 (399)
T KOG0296|consen  347 NGKVRQWDARTGQLKFTYTGH  367 (399)
T ss_pred             CceEEeeeccccceEEEEecC
Confidence            999999999999999887654

>KOG0278|consensus

Probab=99.86  E-value=5.2e-21  Score=123.68  Aligned_cols=145  Identities=17%  Similarity=0.232  Sum_probs=115.5

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      ....+++|+.++++++++.+..+      .+...+.+|++.|..+.|  ..+.|++.+.|++|++||.++++.++.+. .
T Consensus       111 ds~~lltgg~ekllrvfdln~p~------App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~-~  183 (334)
T KOG0278|consen  111 DSNYLLTGGQEKLLRVFDLNRPK------APPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE-F  183 (334)
T ss_pred             cchhhhccchHHHhhhhhccCCC------CCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe-c
Confidence            45678999999999999887654      233456799999999999  77788888999999999999987766653 1


Q ss_pred             CC----------------------------------------ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe-
Q psy16373         84 CG----------------------------------------PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI-  122 (166)
Q Consensus        84 ~~----------------------------------------~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~-  122 (166)
                      ..                                        .|.+...+|+...++.|+.|..++.||..+++.+..+ 
T Consensus       184 ~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~n  263 (334)
T KOG0278|consen  184 NSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYN  263 (334)
T ss_pred             CCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCccccccccccCCCceEEecCcceEEEEEeccCCceeeecc
Confidence            11                                        2344556676677777888888888888888878776 


Q ss_pred             ecccccEEEEEEcCC--eEEEeecCCcEEEEECCccc
Q psy16373        123 QAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       123 ~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~  157 (166)
                      ++|.++|.++.|+|+  ..++|++||+|++|....++
T Consensus       264 kgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~  300 (334)
T KOG0278|consen  264 KGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGK  300 (334)
T ss_pred             cCCCCceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence            889999999999994  78899999999999876554

>KOG0647|consensus

Probab=99.86  E-value=4e-20  Score=122.14  Aligned_cols=147  Identities=16%  Similarity=0.172  Sum_probs=124.2

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      ..+++++||.|+.++.|..+......  .   .....|.++|.+++|  ++..+++|+.|+.+++||+.++ ....+..|
T Consensus        39 ~~~~~~A~SWD~tVR~wevq~~g~~~--~---ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~-Q~~~v~~H  112 (347)
T KOG0647|consen   39 ADNLLAAGSWDGTVRIWEVQNSGQLV--P---KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG-QVSQVAAH  112 (347)
T ss_pred             cCceEEecccCCceEEEEEecCCccc--c---hhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC-Ceeeeeec
Confidence            45678899999999999987642111  1   234578999999999  8999999999999999999998 44566779


Q ss_pred             CCceEEEEEcCCC--CEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccce
Q psy16373         84 CGPITTLFIDGVS--MMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        84 ~~~v~~~~~~~~~--~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      ..+|.++.|-+..  ..++||+.|.+++.||.|+..++.+++ ..+.+.++..-.+.++.+..++.|.+|+++++..+
T Consensus       113 d~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te  189 (347)
T KOG0647|consen  113 DAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAADVLYPMAVVATAERHIAVYNLENPPTE  189 (347)
T ss_pred             ccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-ccceeeehhccCceeEEEecCCcEEEEEcCCCcch
Confidence            9999999997664  489999999999999999999999887 47788998888889999999999999999876544

>KOG0299|consensus

Probab=99.86  E-value=2.6e-20  Score=128.70  Aligned_cols=154  Identities=17%  Similarity=0.269  Sum_probs=134.4

Q ss_pred             cccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          3 KSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      .+..+.+|++|+.|..+.+|+....+       .++.+++|.+.|.+++|  ..+.+++++.|++|++|+++....+.++
T Consensus       210 vS~Dgkylatgg~d~~v~Iw~~~t~e-------hv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetl  282 (479)
T KOG0299|consen  210 VSSDGKYLATGGRDRHVQIWDCDTLE-------HVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETL  282 (479)
T ss_pred             EcCCCcEEEecCCCceEEEecCcccc-------hhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHH
Confidence            35678899999999999999976554       44457899999999999  6778999999999999999999999999


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-CeEEEeecCCcEEEEECCcccce
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-SYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      .+|++.|.++.....++.+-.|+.|+++++|++. .+....+.++.+.+-+++|-. .++++|+.+|.|.+|++.+.+++
T Consensus       283 yGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~-eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkpl  361 (479)
T KOG0299|consen  283 YGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIP-EESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPL  361 (479)
T ss_pred             hCCccceeeechhcccceEEeccccceeEEEecc-ccceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecccCce
Confidence            9999999999988878888888899999999994 444455778888999999965 79999999999999999999999


Q ss_pred             eeeee
Q psy16373        160 STIQL  164 (166)
Q Consensus       160 ~~~~~  164 (166)
                      ++.+.
T Consensus       362 f~~~~  366 (479)
T KOG0299|consen  362 FTSRL  366 (479)
T ss_pred             eEeec
Confidence            87664

>KOG0267|consensus

Probab=99.85  E-value=7.1e-22  Score=142.91  Aligned_cols=152  Identities=19%  Similarity=0.311  Sum_probs=136.5

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      .....++++|+.++++++|+.+...       .++++.+|...+.++.|  .+.+.++|+.|..+.+||.+...+.+.+.
T Consensus        79 ~~~E~LlaagsasgtiK~wDleeAk-------~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~  151 (825)
T KOG0267|consen   79 DTSERLLAAGSASGTIKVWDLEEAK-------IVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYK  151 (825)
T ss_pred             CcchhhhcccccCCceeeeehhhhh-------hhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeec
Confidence            4456789999999999999987433       45588899999999999  77888999999999999999888999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-C-eEEEeecCCcEEEEECCcccce
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-S-YVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~-~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      +|...+..+.|+|+|++++.+++|..+++||+..++....|..|++.+..+.|+| + .+.+|+.|+++++||+++.+.+
T Consensus       152 s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I  231 (825)
T KOG0267|consen  152 SHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVI  231 (825)
T ss_pred             CCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEe
Confidence            9999999999999999999999999999999999999999999999999999999 3 6788899999999999987766


Q ss_pred             eee
Q psy16373        160 STI  162 (166)
Q Consensus       160 ~~~  162 (166)
                      .+.
T Consensus       232 ~s~  234 (825)
T KOG0267|consen  232 SSG  234 (825)
T ss_pred             ecc
Confidence            543

>KOG0647|consensus

Probab=99.85  E-value=3.3e-20  Score=122.52  Aligned_cols=124  Identities=23%  Similarity=0.385  Sum_probs=106.9

Q ss_pred             ccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc-cce-ehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC
Q psy16373         42 AHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ-QLL-FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG  116 (166)
Q Consensus        42 ~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~-~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~  116 (166)
                      ...+.|.+++|   ...+++++|-|++||+|+++.. ... +....|.++|.+++|+.+|..+++|+.|+.+++||+.++
T Consensus        25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~  104 (347)
T KOG0647|consen   25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG  104 (347)
T ss_pred             CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC
Confidence            45678999999   4567779999999999999873 322 445568999999999999999999999999999999998


Q ss_pred             eeeEEeecccccEEEEEEcC----CeEEEeecCCcEEEEECCcccceeeeeecC
Q psy16373        117 ACMYSIQAHDGCIHALTYSD----SYVISLGQDERLCVWDRFQGHLLSTIQLQG  166 (166)
Q Consensus       117 ~~~~~~~~~~~~v~~i~~~~----~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~  166 (166)
                      + +..+..|.++|..+.|-+    ..|+||+-|++|+.||.|...++.++++++
T Consensus       105 Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPe  157 (347)
T KOG0647|consen  105 Q-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPE  157 (347)
T ss_pred             C-eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccc
Confidence            4 566778999999999976    378999999999999999999999998864

>KOG0267|consensus

Probab=99.85  E-value=3.3e-21  Score=139.50  Aligned_cols=149  Identities=27%  Similarity=0.418  Sum_probs=133.5

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG   85 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~   85 (166)
                      ..+++|+.+..+-+|.......       ...+.+|..+|.++.|  ...+|++|+.+|+|++||+++++.++++.+|..
T Consensus        41 r~~~~Gg~~~k~~L~~i~kp~~-------i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~  113 (825)
T KOG0267|consen   41 RSLVTGGEDEKVNLWAIGKPNA-------ITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLL  113 (825)
T ss_pred             eeeccCCCceeeccccccCCch-------hheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhcccc
Confidence            5678888888888888755432       2247899999999999  677899999999999999999999999999999


Q ss_pred             ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCcccceeeee
Q psy16373         86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      .+.++.|+|-+.++++|+.|+.+++||.+..-+.+.+.+|...|..+.|+|+  +++.++.|..+++||...|+.+..|+
T Consensus       114 ~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~  193 (825)
T KOG0267|consen  114 NITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFK  193 (825)
T ss_pred             CcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccc
Confidence            9999999999999999999999999999988889999999999999999993  89999999999999999999887776

>KOG0283|consensus

Probab=99.85  E-value=5.9e-20  Score=134.47  Aligned_cols=149  Identities=17%  Similarity=0.215  Sum_probs=123.4

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      +..+|++++.|+++++|......     |..   .-.|...|+|++|   +.++|++|+.|+.++||++...+.+.-...
T Consensus       379 Kn~fLLSSSMDKTVRLWh~~~~~-----CL~---~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl  450 (712)
T KOG0283|consen  379 KNNFLLSSSMDKTVRLWHPGRKE-----CLK---VFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDL  450 (712)
T ss_pred             cCCeeEeccccccEEeecCCCcc-----eee---EEecCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhh
Confidence            46789999999999999986443     222   2379999999999   899999999999999999998777655554


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec--c------cccEEEEEEcC---CeEEEeecCCcEEEE
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA--H------DGCIHALTYSD---SYVISLGQDERLCVW  151 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~--~------~~~v~~i~~~~---~~l~~~~~d~~i~~w  151 (166)
                      + .-|++++|.|+|+..+.|+.+|.+++|+.+..+....++-  |      ...|+.+.|.|   +.+++.+.|..|+|+
T Consensus       451 ~-~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~  529 (712)
T KOG0283|consen  451 R-DLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIY  529 (712)
T ss_pred             h-hhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEE
Confidence            4 7899999999999999999999999999987776665421  1      22799999987   568888899999999


Q ss_pred             ECCcccceeeee
Q psy16373        152 DRFQGHLLSTIQ  163 (166)
Q Consensus       152 d~~~~~~~~~~~  163 (166)
                      |.++...+.+|.
T Consensus       530 d~~~~~lv~KfK  541 (712)
T KOG0283|consen  530 DGRDKDLVHKFK  541 (712)
T ss_pred             eccchhhhhhhc
Confidence            998877776665

>KOG4283|consensus

Probab=99.85  E-value=1.1e-19  Score=120.10  Aligned_cols=150  Identities=17%  Similarity=0.234  Sum_probs=120.9

Q ss_pred             ceEEEEecCCCceEEEeecccccc---eeeceee-----eeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEE---MTLTCCK-----VESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ   74 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~   74 (166)
                      .+.++++|+.|+.+.+|+.+...+   ..+.++.     ...-.+|...|..+.|   +...+.+++-|.+++|||..+.
T Consensus        55 egrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTl  134 (397)
T KOG4283|consen   55 EGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTL  134 (397)
T ss_pred             cceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecccccceEEEeecccc
Confidence            356778888888888888754331   1111111     1122478899999999   7888999999999999999988


Q ss_pred             cceehhcCCCCceEEEEEcCC---CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC---eEEEeecCCcE
Q psy16373         75 QLLFTLHGHCGPITTLFIDGV---SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS---YVISLGQDERL  148 (166)
Q Consensus        75 ~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~---~l~~~~~d~~i  148 (166)
                      +....|+ ..+.|.+-+++|-   ..++++|..+-.|++.|+.+|..-..+++|++.|.++.|+|.   .|++|+.||.|
T Consensus       135 Q~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~i  213 (397)
T KOG4283|consen  135 QEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAI  213 (397)
T ss_pred             eeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceE
Confidence            7766665 5667888888775   467888899999999999999999999999999999999993   78999999999


Q ss_pred             EEEECCcc
Q psy16373        149 CVWDRFQG  156 (166)
Q Consensus       149 ~~wd~~~~  156 (166)
                      ++||++..
T Consensus       214 rlWDiRra  221 (397)
T KOG4283|consen  214 RLWDIRRA  221 (397)
T ss_pred             EEEEeecc
Confidence            99999865

>KOG0310|consensus

Probab=99.85  E-value=6e-20  Score=127.65  Aligned_cols=145  Identities=22%  Similarity=0.324  Sum_probs=121.9

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      .+.++++|...|.+.+++....       ..+..+++|+.++....|   ++..+++|+.|+.+++||+.+......+.+
T Consensus        79 DG~LlaaGD~sG~V~vfD~k~r-------~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~  151 (487)
T KOG0310|consen   79 DGRLLAAGDESGHVKVFDMKSR-------VILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSG  151 (487)
T ss_pred             CCeEEEccCCcCcEEEeccccH-------HHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecC
Confidence            3789999999999999985431       234567899999999998   777899999999999999999887668899


Q ss_pred             CCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCC-eeeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCcccc
Q psy16373         83 HCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus        83 ~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      |++-|.|.+++|. +..++||+.||.|++||++.. ..+.++. |..+|-.+.+-|+  .+++++ ...+++||+.+|..
T Consensus       152 htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg~pVe~vl~lpsgs~iasAg-Gn~vkVWDl~~G~q  229 (487)
T KOG0310|consen  152 HTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HGCPVESVLALPSGSLIASAG-GNSVKVWDLTTGGQ  229 (487)
T ss_pred             CcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec-CCCceeeEEEcCCCCEEEEcC-CCeEEEEEecCCce
Confidence            9999999999997 568999999999999999987 6666665 8899999999873  566665 56899999986654


Q ss_pred             e
Q psy16373        159 L  159 (166)
Q Consensus       159 ~  159 (166)
                      +
T Consensus       230 l  230 (487)
T KOG0310|consen  230 L  230 (487)
T ss_pred             e
Confidence            3

>KOG0973|consensus

Probab=99.85  E-value=4.7e-20  Score=138.17  Aligned_cols=160  Identities=14%  Similarity=0.203  Sum_probs=133.5

Q ss_pred             ccceEEEEecC--CCceEEEeeccccc----ceee-ceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccc-
Q psy16373          4 SVHRIHLRTGS--AGSLLDFKKMQVEE----EMTL-TCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLED-   73 (166)
Q Consensus         4 ~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~-   73 (166)
                      +.....++||+  .|+.+++|..+.-.    +... ..+.+-+...|.+.|+|+.|  +|.+|++|+.|+.|.+|+... 
T Consensus        22 ~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~  101 (942)
T KOG0973|consen   22 HPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEI  101 (942)
T ss_pred             cCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeeccc
Confidence            45677899999  77777788874321    1111 12344556789999999999  999999999999999998872 


Q ss_pred             -----------------ccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC
Q psy16373         74 -----------------QQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD  136 (166)
Q Consensus        74 -----------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~  136 (166)
                                       .+....+.+|.+.|..++|+|++.++++++.|++|.+||.++.+.+..+.+|.+.|-.+.|+|
T Consensus       102 ~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP  181 (942)
T KOG0973|consen  102 GSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDP  181 (942)
T ss_pred             CCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecccccccceEECC
Confidence                             134566789999999999999999999999999999999999999999999999999999999


Q ss_pred             --CeEEEeecCCcEEEEECCcccceeeee
Q psy16373        137 --SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       137 --~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                        .++++-+.|++|++|++.+....+.+.
T Consensus       182 ~Gky~ASqsdDrtikvwrt~dw~i~k~It  210 (942)
T KOG0973|consen  182 IGKYFASQSDDRTLKVWRTSDWGIEKSIT  210 (942)
T ss_pred             ccCeeeeecCCceEEEEEcccceeeEeec
Confidence              699999999999999987766666554

>KOG0275|consensus

Probab=99.84  E-value=1.2e-20  Score=126.36  Aligned_cols=111  Identities=21%  Similarity=0.331  Sum_probs=97.7

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeee-eccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVEST-RAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      ..-++++|+.||.+++|......       .++.+ +.|+..|+|+.|  ++..+++++.|.++++..+++|+.+.++++
T Consensus       274 DsEMlAsGsqDGkIKvWri~tG~-------ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrG  346 (508)
T KOG0275|consen  274 DSEMLASGSQDGKIKVWRIETGQ-------CLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRG  346 (508)
T ss_pred             cHHHhhccCcCCcEEEEEEecch-------HHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcC
Confidence            34578999999999999986543       22233 389999999999  889999999999999999999999999999


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ  123 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~  123 (166)
                      |.+-|+...|.++|..+++++.||++++|+.++.+++.+++
T Consensus       347 HsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk  387 (508)
T KOG0275|consen  347 HSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFK  387 (508)
T ss_pred             ccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhcc
Confidence            99999999999999999999999999999998887766554

>KOG0301|consensus

Probab=99.84  E-value=9.3e-20  Score=131.48  Aligned_cols=142  Identities=25%  Similarity=0.369  Sum_probs=124.0

Q ss_pred             EEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCCCceE
Q psy16373         10 LRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPIT   88 (166)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~   88 (166)
                      +++||.|...++|......         ..+++|..+|+++.. ..+.+++||.|.+|++|.-  ++.+++|.+|.+-|.
T Consensus       115 ~iSgSWD~TakvW~~~~l~---------~~l~gH~asVWAv~~l~e~~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VR  183 (745)
T KOG0301|consen  115 LISGSWDSTAKVWRIGELV---------YSLQGHTASVWAVASLPENTYVTGSADKTIKLWKG--GTLLKTFSGHTDCVR  183 (745)
T ss_pred             eEecccccceEEecchhhh---------cccCCcchheeeeeecCCCcEEeccCcceeeeccC--Cchhhhhccchhhee
Confidence            8999999999999975432         237899999999998 6669999999999999987  788899999999999


Q ss_pred             EEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEc-C-CeEEEeecCCcEEEEECCcccceeeeeecC
Q psy16373         89 TLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYS-D-SYVISLGQDERLCVWDRFQGHLLSTIQLQG  166 (166)
Q Consensus        89 ~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~-~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~  166 (166)
                      .+++-++ ..+++|+.||.|++|++ +++.+..+.+|+.-+.++... + +.++++++|+++++|+..  ++.+.|++++
T Consensus       184 gL~vl~~-~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPt  259 (745)
T KOG0301|consen  184 GLAVLDD-SHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPT  259 (745)
T ss_pred             eeEEecC-CCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCc
Confidence            9999875 45779999999999999 899999999999999999843 3 699999999999999975  7778777653

>KOG0643|consensus

Probab=99.84  E-value=1.4e-19  Score=117.88  Aligned_cols=120  Identities=23%  Similarity=0.291  Sum_probs=106.8

Q ss_pred             eeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC
Q psy16373         39 STRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG  116 (166)
Q Consensus        39 ~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~  116 (166)
                      .+++|..|++.+.+  +|++|++++.|....||-..+++.+.++.+|++.|.+++++-+...+++|+.|.++++||+++|
T Consensus         5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tG   84 (327)
T KOG0643|consen    5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETG   84 (327)
T ss_pred             ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCC
Confidence            35699999999999  9999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeEEee-----------------------------------------------------cccccEEEEEEcC--CeEEE
Q psy16373        117 ACMYSIQ-----------------------------------------------------AHDGCIHALTYSD--SYVIS  141 (166)
Q Consensus       117 ~~~~~~~-----------------------------------------------------~~~~~v~~i~~~~--~~l~~  141 (166)
                      +.+..++                                                     .+.+.++.+.|.|  ..|++
T Consensus        85 k~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~  164 (327)
T KOG0643|consen   85 KQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIA  164 (327)
T ss_pred             cEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEE
Confidence            8755443                                                     2345677778887  68999


Q ss_pred             eecCCcEEEEECCcccc
Q psy16373        142 LGQDERLCVWDRFQGHL  158 (166)
Q Consensus       142 ~~~d~~i~~wd~~~~~~  158 (166)
                      |..||.|..||+++|+.
T Consensus       165 Ghe~G~is~~da~~g~~  181 (327)
T KOG0643|consen  165 GHEDGSISIYDARTGKE  181 (327)
T ss_pred             ecCCCcEEEEEcccCce
Confidence            99999999999999754

>KOG0301|consensus

Probab=99.84  E-value=1.8e-19  Score=130.06  Aligned_cols=141  Identities=19%  Similarity=0.269  Sum_probs=123.0

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      ++....++||+.|..|++|...         ..+.++.+|.+.|..+++ ++..|+++++||.|++|++ +++.+.++.+
T Consensus       148 ~l~e~~~vTgsaDKtIklWk~~---------~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge~l~~~~g  217 (745)
T KOG0301|consen  148 SLPENTYVTGSADKTIKLWKGG---------TLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DGEVLLEMHG  217 (745)
T ss_pred             ecCCCcEEeccCcceeeeccCC---------chhhhhccchhheeeeEEecCCCeEeecCCceEEEEec-cCceeeeeec
Confidence            3445589999999999999963         244578899999999999 8889999999999999999 6889999999


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-CeEEEeecCCcEEEEECCcc
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-SYVISLGQDERLCVWDRFQG  156 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~  156 (166)
                      |++.+.++...+....++++++|+++++|+..  ++.+.+......|+++.+-+ +-+++|+.||.|++|..+..
T Consensus       218 htn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgDIvvg~SDG~VrVfT~~k~  290 (745)
T KOG0301|consen  218 HTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGDIVVGGSDGRVRVFTVDKD  290 (745)
T ss_pred             cceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCCEEEeccCceEEEEEeccc
Confidence            99999999988888899999999999999975  77788876666899988875 68899999999999987643

>KOG0293|consensus

Probab=99.84  E-value=1.1e-19  Score=124.54  Aligned_cols=107  Identities=15%  Similarity=0.121  Sum_probs=87.8

Q ss_pred             cccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          3 KSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      .|+.+..+|+++.|....+|.......    .+..+++.+|..+|.-+.|  +.++|++|+.+..+.+||+.++.....+
T Consensus       232 FS~nGkyLAsaSkD~Taiiw~v~~d~~----~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y  307 (519)
T KOG0293|consen  232 FSHNGKYLASASKDSTAIIWIVVYDVH----FKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLY  307 (519)
T ss_pred             EcCCCeeEeeccCCceEEEEEEecCcc----eeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhc
Confidence            477889999999999999998765543    3456788999999999999  8899999999999999999999877666


Q ss_pred             c-CCCCceEEEEEcCCCCEEEEecCCCcEEEEeC
Q psy16373         81 H-GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT  113 (166)
Q Consensus        81 ~-~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~  113 (166)
                      . ++...+.+.+|.|++..+++|+.|+.+..||+
T Consensus       308 ~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdl  341 (519)
T KOG0293|consen  308 PSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDL  341 (519)
T ss_pred             ccCcCCCcceeEEccCCceeEecCCCCcEEEecC
Confidence            4 23466777788888877888888877777766

>KOG0973|consensus

Probab=99.83  E-value=2.7e-19  Score=134.18  Aligned_cols=159  Identities=19%  Similarity=0.209  Sum_probs=131.0

Q ss_pred             ccceEEEEecCCCceEEEeecccc-----------cceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEE
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVE-----------EEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYK   70 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~   70 (166)
                      +..+-+||+|++|+.+.+|.....           ......-+....+.+|...|..++|  ++.+|++++.|++|.+|+
T Consensus        78 S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn  157 (942)
T KOG0973|consen   78 SPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWN  157 (942)
T ss_pred             CCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEc
Confidence            456789999999999999998731           0011112345567899999999999  789999999999999999


Q ss_pred             cccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee--------------------------------
Q psy16373         71 LEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC--------------------------------  118 (166)
Q Consensus        71 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~--------------------------------  118 (166)
                      ..+.+.+..+.+|.+.|-.+.|+|-|+++++-+.|+++++|++.+...                                
T Consensus       158 ~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~  237 (942)
T KOG0973|consen  158 AKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASP  237 (942)
T ss_pred             cccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecch
Confidence            999999999999999999999999999999999999999998533211                                


Q ss_pred             --------------------eEEeecccccEEEEEEcC-------C------------eEEEeecCCcEEEEECCcccce
Q psy16373        119 --------------------MYSIQAHDGCIHALTYSD-------S------------YVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus       119 --------------------~~~~~~~~~~v~~i~~~~-------~------------~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                                          -..+.+|.+++.+++|+|       .            .+++|+.|++|.+|.....+++
T Consensus       238 nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl  317 (942)
T KOG0973|consen  238 NAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPL  317 (942)
T ss_pred             hhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCch
Confidence                                223448999999999986       2            5788899999999999888876


Q ss_pred             eee
Q psy16373        160 STI  162 (166)
Q Consensus       160 ~~~  162 (166)
                      ..+
T Consensus       318 ~vi  320 (942)
T KOG0973|consen  318 FVI  320 (942)
T ss_pred             hhh
Confidence            543

>KOG0306|consensus

Probab=99.83  E-value=1.7e-19  Score=131.37  Aligned_cols=142  Identities=27%  Similarity=0.427  Sum_probs=130.2

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      ....++|.|=.||.+++|+.....       ...++.+|...|+++.|  .|..|++||.|+.|.+||+-...-+..+.+
T Consensus        75 ~d~l~lAVGYaDGsVqif~~~s~~-------~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~G  147 (888)
T KOG0306|consen   75 DDILLLAVGYADGSVQIFSLESEE-------ILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRG  147 (888)
T ss_pred             CCcceEEEEecCceEEeeccCCCc-------eeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEeec
Confidence            445688999999999999976442       33467799999999999  899999999999999999998888899999


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEEC
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDR  153 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~  153 (166)
                      |+..|+...|....+.+++.+.|+.+++||+.+..+..+...|++.++++++.++.+++++.|+.+++|++
T Consensus       148 Hkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~~~lvt~~~dse~~v~~L  218 (888)
T KOG0306|consen  148 HKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDEKLLVTAGTDSELKVWEL  218 (888)
T ss_pred             chHHHhHHhccCCCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEecceEEEEecCCceEEEEe
Confidence            99999999998888999999999999999999999999999999999999999999999999999999998

>KOG0270|consensus

Probab=99.83  E-value=1.5e-19  Score=124.51  Aligned_cols=159  Identities=15%  Similarity=0.192  Sum_probs=127.3

Q ss_pred             ceEEEEecCCCceEEEeecccccceeece--------------eeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEE
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTC--------------CKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKV   68 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v   68 (166)
                      .++++|.|..+..|.+|++..........              +......+|+..|.+++|   ..+.|++||.|.+|++
T Consensus       191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l  270 (463)
T KOG0270|consen  191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL  270 (463)
T ss_pred             CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence            46789999999999999986543221100              011112468888999999   5678999999999999


Q ss_pred             EEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCee-eEEeecccccEEEEEEcC---CeEEEee
Q psy16373         69 YKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGAC-MYSIQAHDGCIHALTYSD---SYVISLG  143 (166)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~-~~~~~~~~~~v~~i~~~~---~~l~~~~  143 (166)
                      ||+.++++...+..|...|.++.|+|. ...+++|+.|+++.+.|+|.... -..++ -.+.|-.++|++   ..++++.
T Consensus       271 WD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk-~~g~VEkv~w~~~se~~f~~~t  349 (463)
T KOG0270|consen  271 WDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK-FDGEVEKVAWDPHSENSFFVST  349 (463)
T ss_pred             EEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE-eccceEEEEecCCCceeEEEec
Confidence            999999999999999999999999987 88999999999999999995322 22233 256788899987   5888889


Q ss_pred             cCCcEEEEECCcc-cceeeeeec
Q psy16373        144 QDERLCVWDRFQG-HLLSTIQLQ  165 (166)
Q Consensus       144 ~d~~i~~wd~~~~-~~~~~~~~~  165 (166)
                      .||.++-+|+|+. +++++++.+
T Consensus       350 ddG~v~~~D~R~~~~~vwt~~AH  372 (463)
T KOG0270|consen  350 DDGTVYYFDIRNPGKPVWTLKAH  372 (463)
T ss_pred             CCceEEeeecCCCCCceeEEEec
Confidence            9999999999986 888888765

>KOG0270|consensus

Probab=99.83  E-value=5.6e-19  Score=121.75  Aligned_cols=147  Identities=18%  Similarity=0.188  Sum_probs=122.4

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      ...+..|++|+.|..+++|++....       +..++..|...|.++.|   .+..|++|+.|++|.+.|.+.-......
T Consensus       253 ~~~~nVLaSgsaD~TV~lWD~~~g~-------p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~  325 (463)
T KOG0270|consen  253 RNFRNVLASGSADKTVKLWDVDTGK-------PKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKE  325 (463)
T ss_pred             cccceeEEecCCCceEEEEEcCCCC-------cceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCce
Confidence            4457889999999999999987654       33456689999999999   7889999999999999999852222111


Q ss_pred             cCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCC-eeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCc
Q psy16373         81 HGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~  155 (166)
                      -...+.|-.+.|+|. ...++++..||+++-+|+|+. +++.++++|.++|.++.+++   +.++|++.|+.+++|++..
T Consensus       326 wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~  405 (463)
T KOG0270|consen  326 WKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDV  405 (463)
T ss_pred             EEeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecC
Confidence            124678999999887 567788889999999999966 99999999999999999985   6999999999999999865


Q ss_pred             cc
Q psy16373        156 GH  157 (166)
Q Consensus       156 ~~  157 (166)
                      -.
T Consensus       406 ~~  407 (463)
T KOG0270|consen  406 DS  407 (463)
T ss_pred             CC
Confidence            43

>KOG0303|consensus

Probab=99.82  E-value=1.9e-19  Score=122.75  Aligned_cols=123  Identities=17%  Similarity=0.335  Sum_probs=111.8

Q ss_pred             eeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc-------cceehhcCCCCceEEEEEcCC-CCEEEEecCCCc
Q psy16373         39 STRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ-------QLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGL  107 (166)
Q Consensus        39 ~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~-------~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~  107 (166)
                      .+.+|+++|..++|   +.+.|++||.|.+|.||.+..+       +++..+.+|...|.-++|+|. .+.+++++.|.+
T Consensus        76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~  155 (472)
T KOG0303|consen   76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT  155 (472)
T ss_pred             CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence            45699999999999   7889999999999999999765       456677899999999999998 788899999999


Q ss_pred             EEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeee
Q psy16373        108 LCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       108 v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      +.+||+.+++.+..+. |..-|+++.|+.  ..++|.+.|+.|++||.++++.+..-
T Consensus       156 v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~  211 (472)
T KOG0303|consen  156 VSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEG  211 (472)
T ss_pred             EEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeec
Confidence            9999999999998888 999999999987  59999999999999999999988765

>KOG0302|consensus

Probab=99.82  E-value=4.7e-19  Score=120.22  Aligned_cols=158  Identities=17%  Similarity=0.259  Sum_probs=126.1

Q ss_pred             ceEEEEecCCCceEEEeeccccc---------ceeeceeeeeeeeccCCceEEEEec---CcEEEEEecCCeEEEEEccc
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEE---------EMTLTCCKVESTRAHHQPITVLECV---SNRVITGSQDHTLKVYKLED   73 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~v~v~~~~~   73 (166)
                      ...+.++.+..|.+.+|+....-         .......+++++.+|...=..++|+   ...|++|..-+.|++|...+
T Consensus       164 ~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~  243 (440)
T KOG0302|consen  164 NEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPST  243 (440)
T ss_pred             CcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccccCccccceEeeeecc
Confidence            34577889999999999974321         1112345778888999888999993   45688998899999999988


Q ss_pred             ccce---ehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCC---eeeEEeecccccEEEEEEcC--CeEEEeec
Q psy16373         74 QQLL---FTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTG---ACMYSIQAHDGCIHALTYSD--SYVISLGQ  144 (166)
Q Consensus        74 ~~~~---~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~---~~~~~~~~~~~~v~~i~~~~--~~l~~~~~  144 (166)
                      +...   ..+.+|+..|-.++|+|. ...|++|+.||+|+|||+|++   .++. .++|.+.|+.|.|+.  .+|++|+.
T Consensus       244 g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~-~kAh~sDVNVISWnr~~~lLasG~D  322 (440)
T KOG0302|consen  244 GSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVS-TKAHNSDVNVISWNRREPLLASGGD  322 (440)
T ss_pred             CceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeE-eeccCCceeeEEccCCcceeeecCC
Confidence            7543   346679999999999998 678999999999999999988   3333 378999999999997  58999999


Q ss_pred             CCcEEEEECCc---ccceeeeee
Q psy16373        145 DERLCVWDRFQ---GHLLSTIQL  164 (166)
Q Consensus       145 d~~i~~wd~~~---~~~~~~~~~  164 (166)
                      ||++++||+|.   ++++.+|..
T Consensus       323 dGt~~iwDLR~~~~~~pVA~fk~  345 (440)
T KOG0302|consen  323 DGTLSIWDLRQFKSGQPVATFKY  345 (440)
T ss_pred             CceEEEEEhhhccCCCcceeEEe
Confidence            99999999986   445555553

>KOG0288|consensus

Probab=99.82  E-value=1.3e-20  Score=128.77  Aligned_cols=153  Identities=22%  Similarity=0.305  Sum_probs=133.9

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG   85 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~   85 (166)
                      -.|++|+.|..|.+|+.....     +....++.+..++|+.+.+  ++..+++++.|+.+++|++.+.+...++.+|++
T Consensus       188 dtlatgg~Dr~Ik~W~v~~~k-----~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtd  262 (459)
T KOG0288|consen  188 DTLATGGSDRIIKLWNVLGEK-----SELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTD  262 (459)
T ss_pred             chhhhcchhhhhhhhhcccch-----hhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhccccc
Confidence            578999999999999976543     3455677888999999999  788899999999999999999999999999999


Q ss_pred             ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373         86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      .|+++.|......+++|+.|.+++.||+....+..+.-. .+.+.+|..++..++++-.|++|++||.+++.+..+++++
T Consensus       263 kVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~-~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~g  341 (459)
T KOG0288|consen  263 KVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLP-GSQCNDIVCSISDVISGHFDKKVRFWDIRSADKTRSVPLG  341 (459)
T ss_pred             ceeeehhhccccceeeccccchhhhhhhhhhheeccccc-cccccceEecceeeeecccccceEEEeccCCceeeEeecC
Confidence            999999987766699999999999999999888777653 5677888888888899999999999999999998888765


Q ss_pred             C
Q psy16373        166 G  166 (166)
Q Consensus       166 ~  166 (166)
                      |
T Consensus       342 g  342 (459)
T KOG0288|consen  342 G  342 (459)
T ss_pred             c
Confidence            4

>KOG0303|consensus

Probab=99.81  E-value=9.1e-19  Score=119.51  Aligned_cols=151  Identities=14%  Similarity=0.215  Sum_probs=126.6

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      +....+|+||.|..+.+|.........-...++..+.+|...|.-++|   ..+.|++++.|..|.+|++.+++.+-++.
T Consensus        92 fnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~  171 (472)
T KOG0303|consen   92 FNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD  171 (472)
T ss_pred             cCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC
Confidence            456789999999999999987765444445677889999999999999   67889999999999999999999988888


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccc-cEEEEEEc-CCeEEEeec----CCcEEEEECCc
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDG-CIHALTYS-DSYVISLGQ----DERLCVWDRFQ  155 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~-~v~~i~~~-~~~l~~~~~----d~~i~~wd~~~  155 (166)
                       |...|.++.|+.+|.++++.+.|..|++||.++++.+..-.+|.+ .-..+.|- ...++|.+.    ++.+.+||..+
T Consensus       172 -hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~n  250 (472)
T KOG0303|consen  172 -HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNN  250 (472)
T ss_pred             -CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeeccccccccceeccCccc
Confidence             999999999999999999999999999999999999988877875 23344443 334665554    67899998876


Q ss_pred             c
Q psy16373        156 G  156 (166)
Q Consensus       156 ~  156 (166)
                      -
T Consensus       251 l  251 (472)
T KOG0303|consen  251 L  251 (472)
T ss_pred             c
Confidence            4

>KOG1332|consensus

Probab=99.81  E-value=2.7e-19  Score=115.30  Aligned_cols=145  Identities=14%  Similarity=0.166  Sum_probs=118.9

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe----cCcEEEEEecCCeEEEEEcccc---ccee
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC----VSNRVITGSQDHTLKVYKLEDQ---QLLF   78 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~d~~v~v~~~~~~---~~~~   78 (166)
                      .+..|+++++|+.+++|+.+...     -.+......|...|++++|    -+-.|++++.||.|.+.+.++.   ....
T Consensus        69 ~G~iLAScsYDgkVIiWke~~g~-----w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~k  143 (299)
T KOG1332|consen   69 FGTILASCSYDGKVIIWKEENGR-----WTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSK  143 (299)
T ss_pred             cCcEeeEeecCceEEEEecCCCc-----hhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchh
Confidence            46789999999999999976542     2334456689999999999    4557999999999999998764   2233


Q ss_pred             hhcCCCCceEEEEEcCC---C-----------CEEEEecCCCcEEEEeCcCC--eeeEEeecccccEEEEEEcC------
Q psy16373         79 TLHGHCGPITTLFIDGV---S-----------MMSGSGSQDGLLCVWDTVTG--ACMYSIQAHDGCIHALTYSD------  136 (166)
Q Consensus        79 ~~~~~~~~v~~~~~~~~---~-----------~~~~~~~~d~~v~~~d~~~~--~~~~~~~~~~~~v~~i~~~~------  136 (166)
                      ...+|.-.|++++|.|.   |           ..|++|+.|..|++|+..++  .....+.+|.+-|..++|.|      
T Consensus       144 i~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~  223 (299)
T KOG1332|consen  144 IVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPK  223 (299)
T ss_pred             hhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCc
Confidence            45679999999999886   3           56999999999999998875  34455889999999999998      


Q ss_pred             CeEEEeecCCcEEEEECCc
Q psy16373        137 SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       137 ~~l~~~~~d~~i~~wd~~~  155 (166)
                      ..|++++.||++.||..+.
T Consensus       224 s~iAS~SqDg~viIwt~~~  242 (299)
T KOG1332|consen  224 STIASCSQDGTVIIWTKDE  242 (299)
T ss_pred             eeeEEecCCCcEEEEEecC
Confidence            2899999999999998763

>KOG0772|consensus

Probab=99.80  E-value=7e-19  Score=123.63  Aligned_cols=117  Identities=26%  Similarity=0.378  Sum_probs=95.3

Q ss_pred             eccCCceEEEEe---cCcEEEEEecCCeEEEEEccccc-ceehhc-----CCCCceEEEEEcCCCCEEEEecCCCcEEEE
Q psy16373         41 RAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQ-LLFTLH-----GHCGPITTLFIDGVSMMSGSGSQDGLLCVW  111 (166)
Q Consensus        41 ~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~-~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~  111 (166)
                      +||...++|-+|   +.+.+++++.||++++||+.+.+ .+..++     +..-++++.+|++++..+|+|..||.|.+|
T Consensus       265 KGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W  344 (641)
T KOG0772|consen  265 KGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIW  344 (641)
T ss_pred             CCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeee
Confidence            689999999999   56789999999999999998753 223332     334578999999999999999999999999


Q ss_pred             eCcCCe--e-eEEeecccc--cEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373        112 DTVTGA--C-MYSIQAHDG--CIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       112 d~~~~~--~-~~~~~~~~~--~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      +..+..  + ...-.+|..  .|++|.|++  ++|++-+.|+++++||++..+
T Consensus       345 ~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~k  397 (641)
T KOG0772|consen  345 DKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFK  397 (641)
T ss_pred             ecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccc
Confidence            975442  2 233356766  899999998  599999999999999998754

>KOG0646|consensus

Probab=99.80  E-value=3.9e-18  Score=118.26  Aligned_cols=159  Identities=22%  Similarity=0.294  Sum_probs=131.5

Q ss_pred             ccceEEEEecCCCceEEEeeccccc--ceeeceeeeeeeeccCCceEEEEe-c---CcEEEEEecCCeEEEEEcccccce
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEE--EMTLTCCKVESTRAHHQPITVLEC-V---SNRVITGSQDHTLKVYKLEDQQLL   77 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~-~---~~~l~~~~~d~~v~v~~~~~~~~~   77 (166)
                      +..+-+|++|+.|+.+..|.....-  ......++...+..|.-+|+++.. .   ..+++++|.|.++++||+..+..+
T Consensus       132 s~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LL  211 (476)
T KOG0646|consen  132 SDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLL  211 (476)
T ss_pred             eCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceee
Confidence            4567799999999999999874321  112245677888999999999999 3   357999999999999999999888


Q ss_pred             ehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe----------------eeEEeecccc--cEEEEEEcC--C
Q psy16373         78 FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA----------------CMYSIQAHDG--CIHALTYSD--S  137 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~----------------~~~~~~~~~~--~v~~i~~~~--~  137 (166)
                      .++. ....+.+++++|.++.+..|+.+|.|.+.++....                .+..+.+|..  +|++++.+-  .
T Consensus       212 lti~-fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~Dgt  290 (476)
T KOG0646|consen  212 LTIT-FPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGT  290 (476)
T ss_pred             EEEe-cCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCcc
Confidence            7766 56789999999999999999999999998875332                3455677877  999999886  5


Q ss_pred             eEEEeecCCcEEEEECCcccceeeee
Q psy16373        138 YVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       138 ~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      .|++|+.||.+.+||+.+.++++++.
T Consensus       291 lLlSGd~dg~VcvWdi~S~Q~iRtl~  316 (476)
T KOG0646|consen  291 LLLSGDEDGKVCVWDIYSKQCIRTLQ  316 (476)
T ss_pred             EEEeeCCCCCEEEEecchHHHHHHHh
Confidence            99999999999999999988887665

>KOG0305|consensus

Probab=99.80  E-value=1.6e-18  Score=123.57  Aligned_cols=149  Identities=20%  Similarity=0.306  Sum_probs=124.6

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      ++....+.+|+.++.+..++....+....      .+.+|...|..++|  ++.++++|++|+.+.|||....+++..+.
T Consensus       267 aW~~~~lssGsr~~~I~~~dvR~~~~~~~------~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~  340 (484)
T KOG0305|consen  267 AWNSSVLSSGSRDGKILNHDVRISQHVVS------TLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFT  340 (484)
T ss_pred             eccCceEEEecCCCcEEEEEEecchhhhh------hhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEe
Confidence            45678899999999999998876543221      36789999999999  99999999999999999998888999999


Q ss_pred             CCCCceEEEEEcCC-CCEEEEe--cCCCcEEEEeCcCCee----------------------------------------
Q psy16373         82 GHCGPITTLFIDGV-SMMSGSG--SQDGLLCVWDTVTGAC----------------------------------------  118 (166)
Q Consensus        82 ~~~~~v~~~~~~~~-~~~~~~~--~~d~~v~~~d~~~~~~----------------------------------------  118 (166)
                      .|.+.|..++|+|. ...||+|  +.|+.|++||..++..                                        
T Consensus       341 ~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps  420 (484)
T KOG0305|consen  341 EHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPS  420 (484)
T ss_pred             ccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccc
Confidence            99999999999997 6778876  4689999999876654                                        


Q ss_pred             ---eEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCcccc
Q psy16373        119 ---MYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus       119 ---~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~  158 (166)
                         +..+.+|...|..++++|+  .+++++.|.++++|++.....
T Consensus       421 ~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~~~  465 (484)
T KOG0305|consen  421 MKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDERP  465 (484)
T ss_pred             cceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCCCC
Confidence               2233478889999999994  899999999999999876433

>KOG0646|consensus

Probab=99.79  E-value=4.8e-18  Score=117.79  Aligned_cols=151  Identities=21%  Similarity=0.276  Sum_probs=122.2

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG   85 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~   85 (166)
                      +++++-.....+.+|......+...       ..--.++|.|+.-  .|.+++.|...+.+++|.+.+|+.+..+.+|-.
T Consensus        52 yllsaq~~rp~l~vw~i~k~~~~~q-------~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ  124 (476)
T KOG0646|consen   52 YLLSAQLKRPLLHVWEILKKDQVVQ-------YIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQ  124 (476)
T ss_pred             heeeecccCccccccccCchhhhhh-------hcccccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhcc
Confidence            4444444555666666654432221       1123467899988  677787777999999999999999999999999


Q ss_pred             ceEEEEEcCCCCEEEEecCCCcEEEEeCc---------CCeeeEEeecccccEEEEEEcC----CeEEEeecCCcEEEEE
Q psy16373         86 PITTLFIDGVSMMSGSGSQDGLLCVWDTV---------TGACMYSIQAHDGCIHALTYSD----SYVISLGQDERLCVWD  152 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~---------~~~~~~~~~~~~~~v~~i~~~~----~~l~~~~~d~~i~~wd  152 (166)
                      .|+++.|+.++.++++|+.||.|.+|++.         +-++++.|..|+-+|+++...+    ..++|++.|.++++||
T Consensus       125 ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wd  204 (476)
T KOG0646|consen  125 SITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWD  204 (476)
T ss_pred             ceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEE
Confidence            99999999999999999999999999763         4478889999999999998875    4999999999999999


Q ss_pred             CCcccceeeeeec
Q psy16373        153 RFQGHLLSTIQLQ  165 (166)
Q Consensus       153 ~~~~~~~~~~~~~  165 (166)
                      +..+..+.++..+
T Consensus       205 lS~g~LLlti~fp  217 (476)
T KOG0646|consen  205 LSLGVLLLTITFP  217 (476)
T ss_pred             eccceeeEEEecC
Confidence            9999988877653

>KOG1036|consensus

Probab=99.79  E-value=8.1e-18  Score=111.44  Aligned_cols=145  Identities=14%  Similarity=0.105  Sum_probs=119.8

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      ....|+.++.|+.+++++...... .       ....|..++.+.+| +...+++|+.||.|+.+|+.++... .+..|.
T Consensus        24 ~~~~LLvssWDgslrlYdv~~~~l-~-------~~~~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~-~igth~   94 (323)
T KOG1036|consen   24 SSSDLLVSSWDGSLRLYDVPANSL-K-------LKFKHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNED-QIGTHD   94 (323)
T ss_pred             cCCcEEEEeccCcEEEEeccchhh-h-------hheecCCceeeeeccCCceEEEeccCceEEEEEecCCcce-eeccCC
Confidence            345566677999999999866521 1       11267889999999 8899999999999999999877653 345599


Q ss_pred             CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCccccee
Q psy16373         85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      .+|.|+.+.+....+++|+.|++|++||.+...+...+.. ...|.++....+.|+.|+.|..+.+||+++...-.
T Consensus        95 ~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~-~kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~~~  169 (323)
T KOG1036|consen   95 EGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQ-GKKVYCMDVSGNRLVVGTSDRKVLIYDLRNLDEPF  169 (323)
T ss_pred             CceEEEEeeccCCeEEEcccCccEEEEecccccccccccc-CceEEEEeccCCEEEEeecCceEEEEEcccccchh
Confidence            9999999999988999999999999999998666666653 45899999999999999999999999999866543

>KOG0649|consensus

Probab=99.78  E-value=4.5e-17  Score=105.30  Aligned_cols=160  Identities=17%  Similarity=0.225  Sum_probs=122.3

Q ss_pred             ccceEEEEecCCCceEEEeeccccc---ceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccc----
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEE---EMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQL----   76 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~----   76 (166)
                      ++....++.|+..+.+.+.......   .......++.+.++|.++|+.++|...+|++|+ ||.|+-|...+...    
T Consensus        19 sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d~~Lls~g-dG~V~gw~W~E~~es~~~   97 (325)
T KOG0649|consen   19 SPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHDDFLLSGG-DGLVYGWEWNEEEESLAT   97 (325)
T ss_pred             CCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeehhheeecc-CceEEEeeehhhhhhccc
Confidence            4455668888888888776664321   111222344556799999999999877888776 49999988764321    


Q ss_pred             --eehhc--C-----CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecC
Q psy16373         77 --LFTLH--G-----HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQD  145 (166)
Q Consensus        77 --~~~~~--~-----~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d  145 (166)
                        +.+.+  -     .-..|+++...|..+.++.++.|+.++-||+++++....+++|+.-|.++.-..  ..+++|++|
T Consensus        98 K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~ED  177 (325)
T KOG0649|consen   98 KRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAED  177 (325)
T ss_pred             hhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCC
Confidence              11111  1     224689999999988788888999999999999999999999999999888743  699999999


Q ss_pred             CcEEEEECCcccceeeeee
Q psy16373        146 ERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       146 ~~i~~wd~~~~~~~~~~~~  164 (166)
                      |++++||.++++.++.+..
T Consensus       178 GtvRvWd~kt~k~v~~ie~  196 (325)
T KOG0649|consen  178 GTVRVWDTKTQKHVSMIEP  196 (325)
T ss_pred             ccEEEEeccccceeEEecc
Confidence            9999999999999988864

>KOG1446|consensus

Probab=99.78  E-value=2.9e-17  Score=109.05  Aligned_cols=152  Identities=19%  Similarity=0.172  Sum_probs=121.4

Q ss_pred             cccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEec--CCeEEEEEccccccee
Q psy16373          3 KSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQ--DHTLKVYKLEDQQLLF   78 (166)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~--d~~v~v~~~~~~~~~~   78 (166)
                      .+..+.++++++.|..+.+++....       ....++..+...+..++|  ..+.++.++.  |.+|+..++.+++.++
T Consensus        22 fs~~G~~litss~dDsl~LYd~~~g-------~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylR   94 (311)
T KOG1446|consen   22 FSDDGLLLITSSEDDSLRLYDSLSG-------KQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLR   94 (311)
T ss_pred             ecCCCCEEEEecCCCeEEEEEcCCC-------ceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEE
Confidence            3456778888898888888886543       345566677788889999  5666666666  8999999999999999


Q ss_pred             hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-C-eEEEeecCCcEEEEECCcc
Q psy16373         79 TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-S-YVISLGQDERLCVWDRFQG  156 (166)
Q Consensus        79 ~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~-~l~~~~~d~~i~~wd~~~~  156 (166)
                      .+.+|...|++++.+|-+..+++++.|++|++||+|..++...+.....++  ++|+| + +++++.....|++||+|.-
T Consensus        95 YF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi--~AfDp~GLifA~~~~~~~IkLyD~Rs~  172 (311)
T KOG1446|consen   95 YFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPI--AAFDPEGLIFALANGSELIKLYDLRSF  172 (311)
T ss_pred             EcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcc--eeECCCCcEEEEecCCCeEEEEEeccc
Confidence            999999999999999999999999999999999999888877776544444  78888 3 5566666669999999874


Q ss_pred             --cceeeee
Q psy16373        157 --HLLSTIQ  163 (166)
Q Consensus       157 --~~~~~~~  163 (166)
                        .+..++.
T Consensus       173 dkgPF~tf~  181 (311)
T KOG1446|consen  173 DKGPFTTFS  181 (311)
T ss_pred             CCCCceeEc
Confidence              3444443

>KOG0639|consensus

Probab=99.78  E-value=1.8e-18  Score=121.48  Aligned_cols=156  Identities=19%  Similarity=0.239  Sum_probs=120.3

Q ss_pred             cccceEEEEecCCCceEEEeecccccceeeceeeeeeee--ccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccc--
Q psy16373          3 KSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR--AHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQL--   76 (166)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~--   76 (166)
                      .++...+++||+.+. |++|+...... .   .++..+.  .....|.+...  +++.|++|+.-.++.|||+..-.+  
T Consensus       427 IS~~trhVyTgGkgc-VKVWdis~pg~-k---~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTpri  501 (705)
T KOG0639|consen  427 ISNPTRHVYTGGKGC-VKVWDISQPGN-K---SPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRI  501 (705)
T ss_pred             ecCCcceeEecCCCe-EEEeeccCCCC-C---CccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcch
Confidence            355566788888775 56676644321 1   1111222  12345655555  999999999999999999976433  


Q ss_pred             eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECC
Q psy16373         77 LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRF  154 (166)
Q Consensus        77 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~  154 (166)
                      ..++.........++.+|+.+...++..||.|.|||+++...++.|++|...+.+|..++  ..|.||+.|.+|+.||++
T Consensus       502 kaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlr  581 (705)
T KOG0639|consen  502 KAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLR  581 (705)
T ss_pred             hhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhh
Confidence            334444455678899999999999999999999999999999999999999999999997  489999999999999999


Q ss_pred             cccceeeee
Q psy16373        155 QGHLLSTIQ  163 (166)
Q Consensus       155 ~~~~~~~~~  163 (166)
                      +++.+++..
T Consensus       582 egrqlqqhd  590 (705)
T KOG0639|consen  582 EGRQLQQHD  590 (705)
T ss_pred             hhhhhhhhh
Confidence            998876544

>KOG0278|consensus

Probab=99.78  E-value=2.7e-19  Score=115.82  Aligned_cols=153  Identities=18%  Similarity=0.228  Sum_probs=128.5

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      +.++.+++++.|+.-.+...+..       .-+.++.+|.+.|++...  +...-++++.|-+-++||.-++..+..+. 
T Consensus        27 p~g~flisa~kd~~pmlr~g~tg-------dwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~-   98 (334)
T KOG0278|consen   27 PDGYFLISASKDGKPMLRNGDTG-------DWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFE-   98 (334)
T ss_pred             CCceEEEEeccCCCchhccCCCC-------CcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhh-
Confidence            45777888888776554443322       235578999999999988  44567788999999999999999988887 


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC-eeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      |+-.|..++|+.+.+++++|+.+..+++||++.. .+...+.+|.+.|..+.|..  ..+++++.|++||+||.+++..+
T Consensus        99 hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v  178 (334)
T KOG0278|consen   99 HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEV  178 (334)
T ss_pred             hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEE
Confidence            8888999999999999999999999999999866 45667889999999999975  58888899999999999999999


Q ss_pred             eeeeec
Q psy16373        160 STIQLQ  165 (166)
Q Consensus       160 ~~~~~~  165 (166)
                      ++++++
T Consensus       179 ~sL~~~  184 (334)
T KOG0278|consen  179 QSLEFN  184 (334)
T ss_pred             EEEecC
Confidence            998864

>KOG0288|consensus

Probab=99.77  E-value=4.4e-18  Score=116.62  Aligned_cols=154  Identities=23%  Similarity=0.292  Sum_probs=119.1

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehh--
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTL--   80 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~--   80 (166)
                      ..+.++++.+.|+..++|+.....       ...++.+|++.|+++.|  ....+++|+.|.+++.||+....+..++  
T Consensus       229 ~~~~~~iAas~d~~~r~Wnvd~~r-------~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~  301 (459)
T KOG0288|consen  229 SDNKHVIAASNDKNLRLWNVDSLR-------LRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLP  301 (459)
T ss_pred             CCCceEEeecCCCceeeeeccchh-------hhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccc
Confidence            456788888899999999976543       34477889999999988  3333788888888888887754332221  


Q ss_pred             ---------------cC---------------------CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec
Q psy16373         81 ---------------HG---------------------HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA  124 (166)
Q Consensus        81 ---------------~~---------------------~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~  124 (166)
                                     .+                     -.+.|+++..++++..+.+++.|.++.+.|+++.+....+.+
T Consensus       302 ~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA  381 (459)
T KOG0288|consen  302 GSQCNDIVCSISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSA  381 (459)
T ss_pred             cccccceEecceeeeecccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeec
Confidence                           11                     134688899999999999999999999999998887777754


Q ss_pred             c----cccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        125 H----DGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       125 ~----~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      .    ....+.+.|+|  .++++|+.||.|++|++.++++.+.+..+
T Consensus       382 ~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s  428 (459)
T KOG0288|consen  382 EGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLS  428 (459)
T ss_pred             cccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccC
Confidence            2    23578899999  49999999999999999999998877654

>KOG1446|consensus

Probab=99.77  E-value=4.1e-17  Score=108.40  Aligned_cols=126  Identities=17%  Similarity=0.163  Sum_probs=110.3

Q ss_pred             eeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecC--CCcEEEEeCc
Q psy16373         39 STRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQ--DGLLCVWDTV  114 (166)
Q Consensus        39 ~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--d~~v~~~d~~  114 (166)
                      .+......|+++.|  +|..+++++.|.++++||..+++.++.+..++..+..++|......++-++.  |.+|+..++.
T Consensus         9 ~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~   88 (311)
T KOG1446|consen    9 VFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLH   88 (311)
T ss_pred             ccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEee
Confidence            34445678999999  8999999999999999999999999999988888999998766666665555  8899999999


Q ss_pred             CCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        115 TGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       115 ~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      +.+.++-|.+|...|+.+..+|  +.+++++.|++|++||+|..++..-+..
T Consensus        89 dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~  140 (311)
T KOG1446|consen   89 DNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNL  140 (311)
T ss_pred             cCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEec
Confidence            9999999999999999999999  7999999999999999998777655543

>KOG0307|consensus

Probab=99.77  E-value=1.5e-18  Score=130.95  Aligned_cols=157  Identities=19%  Similarity=0.288  Sum_probs=125.3

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      .+.++++++|++++.|.+|+++..+. .....    -......|.+++|   ....|++++.+|++.+||++..+++-.+
T Consensus       126 ~~q~nlLASGa~~geI~iWDlnn~~t-P~~~~----~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~l  200 (1049)
T KOG0307|consen  126 PFQGNLLASGADDGEILIWDLNKPET-PFTPG----SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKL  200 (1049)
T ss_pred             ccCCceeeccCCCCcEEEeccCCcCC-CCCCC----CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCccccc
Confidence            45677999999999999999976442 11110    1234567999999   5667999999999999999998887777


Q ss_pred             cCCCC--ceEEEEEcCC-CCEEEEecCC---CcEEEEeCcCC-eeeEEeecccccEEEEEEcC---CeEEEeecCCcEEE
Q psy16373         81 HGHCG--PITTLFIDGV-SMMSGSGSQD---GLLCVWDTVTG-ACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCV  150 (166)
Q Consensus        81 ~~~~~--~v~~~~~~~~-~~~~~~~~~d---~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~  150 (166)
                      ..+.+  .++.++|+|+ ...+++++.|   -.|.+||+|.- .+++.+++|...|.++.|++   .++++++.|+.|.+
T Consensus       201 s~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~  280 (1049)
T KOG0307|consen  201 SDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIIC  280 (1049)
T ss_pred             ccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeE
Confidence            65543  5789999998 4556666554   37999999854 67788899999999999987   48999999999999


Q ss_pred             EECCcccceeeeeec
Q psy16373        151 WDRFQGHLLSTIQLQ  165 (166)
Q Consensus       151 wd~~~~~~~~~~~~~  165 (166)
                      |+..+++.+..+..+
T Consensus       281 wN~~tgEvl~~~p~~  295 (1049)
T KOG0307|consen  281 WNPNTGEVLGELPAQ  295 (1049)
T ss_pred             ecCCCceEeeecCCC
Confidence            999999999887653

>KOG0641|consensus

Probab=99.77  E-value=1.1e-16  Score=102.75  Aligned_cols=119  Identities=20%  Similarity=0.315  Sum_probs=105.5

Q ss_pred             eeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcC--C-----CCceEEEEEcCCCCEEEEecCCCc
Q psy16373         36 KVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHG--H-----CGPITTLFIDGVSMMSGSGSQDGL  107 (166)
Q Consensus        36 ~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~--~-----~~~v~~~~~~~~~~~~~~~~~d~~  107 (166)
                      ..+.+.+|++.|.++-- ++-.+++|+.|.+|+.||++-...+..+..  |     .+.|.++++.|.|+++++|-.|..
T Consensus       175 ~~~a~sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dss  254 (350)
T KOG0641|consen  175 GFHALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSS  254 (350)
T ss_pred             cceeecCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCc
Confidence            34567799999988765 999999999999999999997766665532  2     357899999999999999999999


Q ss_pred             EEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECC
Q psy16373        108 LCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRF  154 (166)
Q Consensus       108 v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~  154 (166)
                      ..+||++.++.++.+..|...|.++.|+|  .++++++.|..|++-|+.
T Consensus       255 c~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlq  303 (350)
T KOG0641|consen  255 CMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQ  303 (350)
T ss_pred             eEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecc
Confidence            99999999999999999999999999999  499999999999999985

>KOG2445|consensus

Probab=99.77  E-value=8.6e-17  Score=106.86  Aligned_cols=149  Identities=15%  Similarity=0.148  Sum_probs=114.6

Q ss_pred             cccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe----cCcEEEEEecCCeEEEEEccc-----
Q psy16373          3 KSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC----VSNRVITGSQDHTLKVYKLED-----   73 (166)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~d~~v~v~~~~~-----   73 (166)
                      ..+.+.++++|+.|..+++|+.+... ..  -......+.|.+.|..+.|    -|+.+++++.|+++.+|.-..     
T Consensus        21 ~D~~GRRmAtCSsDq~vkI~d~~~~s-~~--W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~   97 (361)
T KOG2445|consen   21 FDFYGRRMATCSSDQTVKIWDSTSDS-GT--WSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEA   97 (361)
T ss_pred             ecccCceeeeccCCCcEEEEeccCCC-Cc--eEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeeccccccc
Confidence            35678899999999999999963322 11  2234466789999999999    578899999999999998732     


Q ss_pred             ----ccceehhcCCCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCC------e------------------------
Q psy16373         74 ----QQLLFTLHGHCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTG------A------------------------  117 (166)
Q Consensus        74 ----~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~------~------------------------  117 (166)
                          ......+......|++++|.|.  |-.+++++.||.++||+.-..      .                        
T Consensus        98 ~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsW  177 (361)
T KOG2445|consen   98 HGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSW  177 (361)
T ss_pred             ccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEee
Confidence                1223445567788999999987  889999999999999964211      0                        


Q ss_pred             -------------------------------------eeEEeecccccEEEEEEcCC------eEEEeecCCcEEEEECC
Q psy16373        118 -------------------------------------CMYSIQAHDGCIHALTYSDS------YVISLGQDERLCVWDRF  154 (166)
Q Consensus       118 -------------------------------------~~~~~~~~~~~v~~i~~~~~------~l~~~~~d~~i~~wd~~  154 (166)
                                                           .+.++.+|+.+|++++|.|+      .|++++.|| |+||+++
T Consensus       178 n~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~  256 (361)
T KOG2445|consen  178 NPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVK  256 (361)
T ss_pred             ccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEe
Confidence                                                 02223367889999999983      799999999 9999997


Q ss_pred             c
Q psy16373        155 Q  155 (166)
Q Consensus       155 ~  155 (166)
                      .
T Consensus       257 ~  257 (361)
T KOG2445|consen  257 V  257 (361)
T ss_pred             e
Confidence            4

>KOG1034|consensus

Probab=99.77  E-value=2.7e-17  Score=110.08  Aligned_cols=117  Identities=18%  Similarity=0.276  Sum_probs=103.2

Q ss_pred             ccCCceEEEEe-----c-CcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCc
Q psy16373         42 AHHQPITVLEC-----V-SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        42 ~~~~~i~~~~~-----~-~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~  114 (166)
                      .|.......+|     . +.+++.|+.-|.|++.|+.+++....+.+|...|+.+.++|+ .+++++++.|.+|++|+++
T Consensus        87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~  166 (385)
T KOG1034|consen   87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ  166 (385)
T ss_pred             CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEecc
Confidence            35556666666     2 457888899999999999999999999999999999999998 6899999999999999999


Q ss_pred             CCeeeEEe---ecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccc
Q psy16373        115 TGACMYSI---QAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus       115 ~~~~~~~~---~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      +..++..+   .+|+..|.++.|++  +++++++.|.+|++|++...+.
T Consensus       167 ~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f  215 (385)
T KOG1034|consen  167 TDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEF  215 (385)
T ss_pred             CCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHH
Confidence            99998887   56999999999998  6999999999999999985443

>KOG1036|consensus

Probab=99.77  E-value=2.9e-17  Score=108.83  Aligned_cols=150  Identities=15%  Similarity=0.188  Sum_probs=117.9

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceehhc--C
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLH--G   82 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~--~   82 (166)
                      +-...+++|+.|+.+++|+.....       ....+ .....|.|+...++.|+.|+.+..|.+||+++.....+..  .
T Consensus       104 ~~~~~vIsgsWD~~ik~wD~R~~~-------~~~~~-d~~kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~  175 (323)
T KOG1036|consen  104 YEVGCVISGSWDKTIKFWDPRNKV-------VVGTF-DQGKKVYCMDVSGNRLVVGTSDRKVLIYDLRNLDEPFQRRESS  175 (323)
T ss_pred             ccCCeEEEcccCccEEEEeccccc-------ccccc-ccCceEEEEeccCCEEEEeecCceEEEEEcccccchhhhcccc
Confidence            345678999999999999987421       11111 2234899999999999999999999999999875544332  3


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC----eeeEEeecccc---------cEEEEEEcC--CeEEEeecCCc
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG----ACMYSIQAHDG---------CIHALTYSD--SYVISLGQDER  147 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~----~~~~~~~~~~~---------~v~~i~~~~--~~l~~~~~d~~  147 (166)
                      -+..+.|+++-|.+.-++.++-||.+.+=.+...    +.-..|+.|..         +|++|+|+|  ..++||+.||.
T Consensus       176 lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~  255 (323)
T KOG1036|consen  176 LKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGI  255 (323)
T ss_pred             ceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCce
Confidence            4567899999999888999999999988766655    44555666643         899999999  69999999999


Q ss_pred             EEEEECCcccceeee
Q psy16373        148 LCVWDRFQGHLLSTI  162 (166)
Q Consensus       148 i~~wd~~~~~~~~~~  162 (166)
                      |.+||+.+.+.+..+
T Consensus       256 V~~Wd~~~rKrl~q~  270 (323)
T KOG1036|consen  256 VNIWDLFNRKRLKQL  270 (323)
T ss_pred             EEEccCcchhhhhhc
Confidence            999999988776654

>KOG0649|consensus

Probab=99.76  E-value=6.4e-17  Score=104.58  Aligned_cols=158  Identities=20%  Similarity=0.271  Sum_probs=117.4

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeee--cc-----CCceEEEEe--cCcEEEEEecCCeEEEEEccccc
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR--AH-----HQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ   75 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~   75 (166)
                      +...++.+|++ +.++-|..++..+. ..+++....+  -|     -..|+++..  ..+-++.++.|+.++-||+++++
T Consensus        70 f~d~~Lls~gd-G~V~gw~W~E~~es-~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~  147 (325)
T KOG0649|consen   70 FHDDFLLSGGD-GLVYGWEWNEEEES-LATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGR  147 (325)
T ss_pred             eehhheeeccC-ceEEEeeehhhhhh-ccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCE
Confidence            44556777777 77777776554431 1222222211  12     235777777  34445555689999999999999


Q ss_pred             ceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec---------c-cccEEEEEEcCCeEEEeecC
Q psy16373         76 LLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA---------H-DGCIHALTYSDSYVISLGQD  145 (166)
Q Consensus        76 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~---------~-~~~v~~i~~~~~~l~~~~~d  145 (166)
                      ...++++|++-+.++.-......+++|++||++++||+++++.+..+..         | ...|.+++.+.+++++|+. 
T Consensus       148 i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~edWlvCGgG-  226 (325)
T KOG0649|consen  148 IQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWLVCGGG-  226 (325)
T ss_pred             EEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCceEEecCC-
Confidence            9999999999999999866677888999999999999999998877642         2 2357788888899888764 


Q ss_pred             CcEEEEECCcccceeeeeec
Q psy16373        146 ERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       146 ~~i~~wd~~~~~~~~~~~~~  165 (166)
                      ..+.+|++++.++...|+.+
T Consensus       227 p~lslwhLrsse~t~vfpip  246 (325)
T KOG0649|consen  227 PKLSLWHLRSSESTCVFPIP  246 (325)
T ss_pred             CceeEEeccCCCceEEEecc
Confidence            57899999999998888765

>KOG0772|consensus

Probab=99.76  E-value=6.3e-18  Score=118.92  Aligned_cols=158  Identities=15%  Similarity=0.128  Sum_probs=119.1

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccc---eehhc
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQL---LFTLH   81 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~---~~~~~   81 (166)
                      +-.|+|++.|+.+++|+.+.... +....+.....+...+++..+|  ++..|++|+.||+|.+|+..+...   ...-+
T Consensus       281 k~~FlT~s~DgtlRiWdv~~~k~-q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~  359 (641)
T KOG0772|consen  281 KEEFLTCSYDGTLRIWDVNNTKS-QLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKD  359 (641)
T ss_pred             ccceEEecCCCcEEEEecCCchh-heeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeee
Confidence            45789999999999999875442 1111222222345567888889  899999999999999999854321   22334


Q ss_pred             CCCC--ceEEEEEcCCCCEEEEecCCCcEEEEeCcCC-eeeEEeeccc--ccEEEEEEcCC--eEEEeec------CCcE
Q psy16373         82 GHCG--PITTLFIDGVSMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHD--GCIHALTYSDS--YVISLGQ------DERL  148 (166)
Q Consensus        82 ~~~~--~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~--~~v~~i~~~~~--~l~~~~~------d~~i  148 (166)
                      +|..  .|+|+.|+++|++|++-+.|.++++||+++. +++....+..  -+-+.++|+|+  .|++|+.      .+.+
T Consensus       360 AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L  439 (641)
T KOG0772|consen  360 AHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTL  439 (641)
T ss_pred             ccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceE
Confidence            6776  8999999999999999999999999999976 5565554432  35678999993  6777754      4789


Q ss_pred             EEEECCcccceeeeeec
Q psy16373        149 CVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       149 ~~wd~~~~~~~~~~~~~  165 (166)
                      .+||..+-+.++++..+
T Consensus       440 ~f~d~~t~d~v~ki~i~  456 (641)
T KOG0772|consen  440 FFFDRMTLDTVYKIDIS  456 (641)
T ss_pred             EEEeccceeeEEEecCC
Confidence            99999999988887654

>KOG0641|consensus

Probab=99.76  E-value=1.3e-16  Score=102.37  Aligned_cols=147  Identities=13%  Similarity=0.167  Sum_probs=118.7

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeec---cCCceEEEEe--cCcEEEEEecCCeEEEEEccccccee
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRA---HHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF   78 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~   78 (166)
                      ++.+-+|++|+.|..+++|+...+.-...   .-..+.+   ....|.+++.  .+.+|++|-.|....+||++.+++++
T Consensus       191 swn~~m~~sgsqdktirfwdlrv~~~v~~---l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq  267 (350)
T KOG0641|consen  191 SWNGAMFASGSQDKTIRFWDLRVNSCVNT---LDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQ  267 (350)
T ss_pred             EecCcEEEccCCCceEEEEeeeccceeee---ccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceee
Confidence            45678999999999999999875432111   0111111   1245777777  78999999999999999999999999


Q ss_pred             hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC----eeeEEeecccccEEEEEEcC-C-eEEEeecCCcEEEEE
Q psy16373         79 TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG----ACMYSIQAHDGCIHALTYSD-S-YVISLGQDERLCVWD  152 (166)
Q Consensus        79 ~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~----~~~~~~~~~~~~v~~i~~~~-~-~l~~~~~d~~i~~wd  152 (166)
                      .+..|...|.|+.|+|...++++|+.|..|++-|++..    .++-....|+..+..+.|+| + .+++.+.|.+..+|-
T Consensus       268 ~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa  347 (350)
T KOG0641|consen  268 RFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWA  347 (350)
T ss_pred             eeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEec
Confidence            99999999999999999999999999999999998632    23444566888888999999 3 678888899999997


Q ss_pred             C
Q psy16373        153 R  153 (166)
Q Consensus       153 ~  153 (166)
                      +
T Consensus       348 ~  348 (350)
T KOG0641|consen  348 L  348 (350)
T ss_pred             c
Confidence            5

>KOG0290|consensus

Probab=99.76  E-value=2.4e-17  Score=108.85  Aligned_cols=147  Identities=19%  Similarity=0.229  Sum_probs=111.5

Q ss_pred             eEEEEecCCCceEEEeecccccc-eeece-eeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccc---ee
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEE-MTLTC-CKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQL---LF   78 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~---~~   78 (166)
                      +.+++++++  .+++|....++. ..... ....+-..+..++++..|   ++++|.+++-|-+..+||++++..   ..
T Consensus       113 pdlLATs~D--~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkT  190 (364)
T KOG0290|consen  113 PDLLATSSD--FLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKT  190 (364)
T ss_pred             cchhhcccC--eEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceee
Confidence            344454433  677788754321 11111 111122346689999999   899999999999999999998633   56


Q ss_pred             hhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCe----------------------------------------
Q psy16373         79 TLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGA----------------------------------------  117 (166)
Q Consensus        79 ~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~----------------------------------------  117 (166)
                      ++.+|...|..++|... .+.|++.+.||.+++||+|..+                                        
T Consensus       191 QLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~i  270 (364)
T KOG0290|consen  191 QLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVI  270 (364)
T ss_pred             EEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEE
Confidence            67889999999999886 5689999999999999997432                                        


Q ss_pred             --------eeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCc
Q psy16373        118 --------CMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       118 --------~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~  155 (166)
                              ++..+++|++.|+.++|.|   .+|.+++.|....+||+..
T Consensus       271 LDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q  319 (364)
T KOG0290|consen  271 LDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQ  319 (364)
T ss_pred             EEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccc
Confidence                    1445568999999999998   5999999999999999965

>KOG0289|consensus

Probab=99.76  E-value=4.4e-17  Score=112.52  Aligned_cols=152  Identities=16%  Similarity=0.171  Sum_probs=127.8

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      ...+.+|+.|....+++.+.+.       .+..++||...|+.+.+  +...+++++.|..+++|.............|.
T Consensus       231 ~~~ilTGG~d~~av~~d~~s~q-------~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~  303 (506)
T KOG0289|consen  231 SSKILTGGEDKTAVLFDKPSNQ-------ILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHE  303 (506)
T ss_pred             CCcceecCCCCceEEEecchhh-------hhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCcccccccc
Confidence            3567889999766666655433       34577899999999999  66789999999999999998877777788899


Q ss_pred             CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc--cccEEEEEEcCC--eEEEeecCCcEEEEECCccccee
Q psy16373         85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH--DGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~--~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      .+|+.+..+|.+.++++++.|++..+.|++++..+......  .-.+++.+|+|+  .+.++..|+.+++||++++..+.
T Consensus       304 ~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a  383 (506)
T KOG0289|consen  304 EPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVA  383 (506)
T ss_pred             ccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccc
Confidence            99999999999999999999999999999999888776542  235899999996  67788889999999999988777


Q ss_pred             eeeec
Q psy16373        161 TIQLQ  165 (166)
Q Consensus       161 ~~~~~  165 (166)
                      .|..+
T Consensus       384 ~Fpgh  388 (506)
T KOG0289|consen  384 KFPGH  388 (506)
T ss_pred             cCCCC
Confidence            76543

>KOG4328|consensus

Probab=99.75  E-value=5.3e-17  Score=112.63  Aligned_cols=145  Identities=19%  Similarity=0.252  Sum_probs=114.1

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccc-------
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQL-------   76 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~-------   76 (166)
                      +.++++|+..|.|-+|+...+++..   ..+..+.+|..+|.++.|   +...+++.|.||++++-|++++..       
T Consensus       200 ~~lva~GdK~G~VG~Wn~~~~~~d~---d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~  276 (498)
T KOG4328|consen  200 RKLVAVGDKGGQVGLWNFGTQEKDK---DGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLD  276 (498)
T ss_pred             ceEEEEccCCCcEEEEecCCCCCcc---CceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcC
Confidence            4789999999999999995322211   233445689999999999   677899999999999999873211       


Q ss_pred             --------------------------------------eehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCe
Q psy16373         77 --------------------------------------LFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGA  117 (166)
Q Consensus        77 --------------------------------------~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~  117 (166)
                                                            ...+.-|...|.+++++|. ..+++|++.|++++|||+|+-.
T Consensus       277 ~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~  356 (498)
T KOG4328|consen  277 TDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLR  356 (498)
T ss_pred             ccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhc
Confidence                                                  1122346678999999998 6788999999999999998542


Q ss_pred             ----eeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECC
Q psy16373        118 ----CMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRF  154 (166)
Q Consensus       118 ----~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~  154 (166)
                          ++.....|+.+|.+..|+|  ..|+|.+.|..|++||..
T Consensus       357 ~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss  399 (498)
T KOG4328|consen  357 GKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSS  399 (498)
T ss_pred             CCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecc
Confidence                2334456899999999999  479999999999999983

>KOG0268|consensus

Probab=99.75  E-value=1.3e-17  Score=112.88  Aligned_cols=146  Identities=16%  Similarity=0.216  Sum_probs=123.8

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCce
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPI   87 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v   87 (166)
                      ..+++|+.||.+++|++...+       ...++++|.+.|..|+++.+.+++++.|.+|+.|-+.- .+++++. ....+
T Consensus        80 s~~aSGs~DG~VkiWnlsqR~-------~~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~~-~p~~til-g~s~~  150 (433)
T KOG0268|consen   80 STVASGSCDGEVKIWNLSQRE-------CIRTFKAHEGLVRGICVTQTSFFTVGDDKTVKQWKIDG-PPLHTIL-GKSVY  150 (433)
T ss_pred             hhhhccccCceEEEEehhhhh-------hhheeecccCceeeEEecccceEEecCCcceeeeeccC-Ccceeee-ccccc
Confidence            578999999999999987543       34578899999999999778999999999999999874 4555555 34567


Q ss_pred             EEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373         88 TTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus        88 ~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ..+..+.....++||+.+  |-|||.+...++.++.-....|.++.|+|   +.|++|+.|+.|.+||++++.+++++.+
T Consensus       151 ~gIdh~~~~~~FaTcGe~--i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~  228 (433)
T KOG0268|consen  151 LGIDHHRKNSVFATCGEQ--IDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVIL  228 (433)
T ss_pred             cccccccccccccccCce--eeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeee
Confidence            788887778889988754  99999999999999987778999999999   5888888999999999999999887654

>KOG4283|consensus

Probab=99.75  E-value=6.5e-17  Score=107.15  Aligned_cols=145  Identities=20%  Similarity=0.333  Sum_probs=113.4

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-----cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-----VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      ..-+|.+++.|..+++|+.+..++..     .++++   +.|.+-++     ...++++|..|-.|++.|+.+|...+.+
T Consensus       113 DtGmFtssSFDhtlKVWDtnTlQ~a~-----~F~me---~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~L  184 (397)
T KOG4283|consen  113 DTGMFTSSSFDHTLKVWDTNTLQEAV-----DFKME---GKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTL  184 (397)
T ss_pred             cCceeecccccceEEEeecccceeeE-----EeecC---ceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeee
Confidence            34578999999999999987654322     11222   22333333     4567889999999999999999999999


Q ss_pred             cCCCCceEEEEEcCCCC-EEEEecCCCcEEEEeCcCC-eeeEEe--------------ecccccEEEEEEcC--CeEEEe
Q psy16373         81 HGHCGPITTLFIDGVSM-MSGSGSQDGLLCVWDTVTG-ACMYSI--------------QAHDGCIHALTYSD--SYVISL  142 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~-~~~~~~~d~~v~~~d~~~~-~~~~~~--------------~~~~~~v~~i~~~~--~~l~~~  142 (166)
                      .+|.+.|.++.|+|... .+++|+.||.+++||++.. .+...+              .+|.+.|+.++|..  .+++++
T Consensus       185 sGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~  264 (397)
T KOG4283|consen  185 SGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASC  264 (397)
T ss_pred             ccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhc
Confidence            99999999999999854 5788999999999999854 233322              24667899999987  599999


Q ss_pred             ecCCcEEEEECCcccc
Q psy16373        143 GQDERLCVWDRFQGHL  158 (166)
Q Consensus       143 ~~d~~i~~wd~~~~~~  158 (166)
                      +.|..+++|+..+|+.
T Consensus       265 gtd~r~r~wn~~~G~n  280 (397)
T KOG4283|consen  265 GTDDRIRVWNMESGRN  280 (397)
T ss_pred             cCccceEEeecccCcc
Confidence            9999999999988764

>KOG2048|consensus

Probab=99.74  E-value=3.9e-16  Score=112.72  Aligned_cols=153  Identities=13%  Similarity=0.225  Sum_probs=127.4

Q ss_pred             cccceEEEEecCCCceEEEeecccccceeeceeeeeeeec-cCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          3 KSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRA-HHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      .+.+...+|.+-.++.+.+|......      .....+.+ ....|.+++| ++..|++.+.+|.|.-||+.+.++...+
T Consensus        33 ~s~kS~~lAvsRt~g~IEiwN~~~~w------~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~~~~~  106 (691)
T KOG2048|consen   33 YSHKSNQLAVSRTDGNIEIWNLSNNW------FLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQKYNI  106 (691)
T ss_pred             EeccCCceeeeccCCcEEEEccCCCc------eeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecccCceeEEe
Confidence            34455568999999999999987644      12223444 4568999999 7999999999999999999999999999


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE--eecccccEEEEEEcCC--eEEEeecCCcEEEEECCcc
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS--IQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQG  156 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~--~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~  156 (166)
                      ....+.|.+++.+|.+..++.|++||.+..++...++....  +.-.++.|.++.|+|+  .+++|+.||.|++||..++
T Consensus       107 d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~  186 (691)
T KOG2048|consen  107 DSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSG  186 (691)
T ss_pred             cCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCC
Confidence            98999999999999999999999999888888877765443  4445689999999994  5899999999999999999


Q ss_pred             cceee
Q psy16373        157 HLLST  161 (166)
Q Consensus       157 ~~~~~  161 (166)
                      +.+..
T Consensus       187 ~t~~~  191 (691)
T KOG2048|consen  187 QTLHI  191 (691)
T ss_pred             ceEEE
Confidence            88773

>KOG1009|consensus

Probab=99.74  E-value=3.5e-17  Score=111.97  Aligned_cols=154  Identities=18%  Similarity=0.216  Sum_probs=130.5

Q ss_pred             EEEecCCCceEEEeeccccccee--eceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcc--------c---
Q psy16373          9 HLRTGSAGSLLDFKKMQVEEEMT--LTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLE--------D---   73 (166)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~--------~---   73 (166)
                      .++||+.|..+++|..+..+...  ........+..|...|+++.|  ++++|++|+.+|.|.+|-..        +   
T Consensus        28 ~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~  107 (434)
T KOG1009|consen   28 KLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEAD  107 (434)
T ss_pred             ceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhh
Confidence            78999999999999987665444  345566678899999999999  78899999999999999876        2   


Q ss_pred             -----ccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCC
Q psy16373         74 -----QQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDE  146 (166)
Q Consensus        74 -----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~  146 (166)
                           ......+.+|...|..++|+|+++.+++++.|..+++||+..|..+..+..|..-+..++|.|  .++++-+.|.
T Consensus       108 ~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr  187 (434)
T KOG1009|consen  108 LNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDR  187 (434)
T ss_pred             hCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCc
Confidence                 122345567999999999999999999999999999999999999999999999999999999  5888888898


Q ss_pred             cEEEEECCcccceeee
Q psy16373        147 RLCVWDRFQGHLLSTI  162 (166)
Q Consensus       147 ~i~~wd~~~~~~~~~~  162 (166)
                      ..+.+.+...+.++..
T Consensus       188 ~~~~~~~~~~~~~~~~  203 (434)
T KOG1009|consen  188 HPEGFSAKLKQVIKRH  203 (434)
T ss_pred             ccceeeeeeeeeeeee
Confidence            8888877666555443

>KOG0642|consensus

Probab=99.74  E-value=7.3e-17  Score=114.35  Aligned_cols=110  Identities=22%  Similarity=0.259  Sum_probs=91.7

Q ss_pred             cceEEEEecCCCceEEEeecccc-cceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc-------
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVE-EEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ-------   74 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~-------   74 (166)
                      +-...+++++.++.+.+|..+.. .......+++.++.+|.+||.|+++  ++..+++|+.||+|+.|++...       
T Consensus       304 ~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~  383 (577)
T KOG0642|consen  304 PSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSY  383 (577)
T ss_pred             CCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCccccc
Confidence            44668999999999999998432 2223445788999999999999999  8899999999999999966421       


Q ss_pred             ---cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373         75 ---QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        75 ---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~  114 (166)
                         .....+.+|.+.|..+++++....+++++.||+++.|+..
T Consensus       384 dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~  426 (577)
T KOG0642|consen  384 DPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPT  426 (577)
T ss_pred             CcchhccceeccccceeeeeecccccceeeecCCceEEeeccC
Confidence               2335677899999999999999999999999999999764

>KOG0293|consensus

Probab=99.73  E-value=2.7e-17  Score=113.05  Aligned_cols=124  Identities=16%  Similarity=0.222  Sum_probs=109.2

Q ss_pred             eeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc---cceehhcCCCCceEEEEEcCCCCEEEEecCC
Q psy16373         31 TLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ---QLLFTLHGHCGPITTLFIDGVSMMSGSGSQD  105 (166)
Q Consensus        31 ~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d  105 (166)
                      .+++...+.+..|...|+-+.|  +|.+||+++.|.+..+|++...   +..+++.+|..+|.-+.|+|+.+++++|+.|
T Consensus       211 qip~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~  290 (519)
T KOG0293|consen  211 QIPSQTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFD  290 (519)
T ss_pred             cCCchhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCch
Confidence            4455566677899999999999  8999999999999999998654   4578889999999999999999999999999


Q ss_pred             CcEEEEeCcCCeeeEEeec-ccccEEEEEEcCC--eEEEeecCCcEEEEECC
Q psy16373        106 GLLCVWDTVTGACMYSIQA-HDGCIHALTYSDS--YVISLGQDERLCVWDRF  154 (166)
Q Consensus       106 ~~v~~~d~~~~~~~~~~~~-~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~  154 (166)
                      ..+.+||..++.....+.. +...+.+.+|.|+  .+++|+.|+.+..||+.
T Consensus       291 e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD  342 (519)
T KOG0293|consen  291 EVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD  342 (519)
T ss_pred             HheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC
Confidence            9999999999988777643 4578999999995  89999999999999985

>KOG1539|consensus

Probab=99.73  E-value=1.1e-16  Score=118.03  Aligned_cols=140  Identities=19%  Similarity=0.282  Sum_probs=118.0

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      .+..+++++.+|++.+|+.....       ....+ .-..++.++..  ....++.+..|-.|+++|..+.+.++.+.+|
T Consensus       504 ~n~~~vsa~~~Gilkfw~f~~k~-------l~~~l-~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh  575 (910)
T KOG1539|consen  504 TNRLLVSAGADGILKFWDFKKKV-------LKKSL-RLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGH  575 (910)
T ss_pred             CCceEEEccCcceEEEEecCCcc-------eeeee-ccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhcc
Confidence            45568999999999999986543       11111 12345666766  7788899999999999999999999999999


Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecC-CcEEEEECC
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQD-ERLCVWDRF  154 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d-~~i~~wd~~  154 (166)
                      .+.|++++|+|+|+++++++.|++|++||+.++..+-.+.. ..+++++.|+|  ++|+|+..| .-|++|.-+
T Consensus       576 ~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~v-d~~~~sls~SPngD~LAT~Hvd~~gIylWsNk  648 (910)
T KOG1539|consen  576 GNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLV-DSPCTSLSFSPNGDFLATVHVDQNGIYLWSNK  648 (910)
T ss_pred             ccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEec-CCcceeeEECCCCCEEEEEEecCceEEEEEch
Confidence            99999999999999999999999999999999998877764 67889999999  699999988 679999643

>KOG1407|consensus

Probab=99.73  E-value=3.6e-16  Score=101.90  Aligned_cols=111  Identities=19%  Similarity=0.222  Sum_probs=99.7

Q ss_pred             eeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEE
Q psy16373         34 CCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVW  111 (166)
Q Consensus        34 ~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~  111 (166)
                      .+++..++.|.....|+.|  +|.+|++|+.|..+.+||+++.-+++.+..+.-+|..+.|+.+|++++++++|..|-|=
T Consensus       179 Lkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA  258 (313)
T KOG1407|consen  179 LKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIA  258 (313)
T ss_pred             cccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeE
Confidence            3567788899988888998  89999999999999999999988888888899999999999999999999999999999


Q ss_pred             eCcCCeeeEEeecccccEEEEEEcCC--eEEEeecC
Q psy16373        112 DTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQD  145 (166)
Q Consensus       112 d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d  145 (166)
                      ++++|..+..++ ++++-..++|+|.  .|+-++.|
T Consensus       259 ~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~dd  293 (313)
T KOG1407|consen  259 EVETGDRVWEIP-CEGPTFTVAWHPKRPLLAYACDD  293 (313)
T ss_pred             ecccCCeEEEee-ccCCceeEEecCCCceeeEEecC
Confidence            999999999887 6889999999994  56655554

>KOG1445|consensus

Probab=99.73  E-value=4e-17  Score=117.85  Aligned_cols=147  Identities=15%  Similarity=0.218  Sum_probs=118.0

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc-------cce
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ-------QLL   77 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~-------~~~   77 (166)
                      .-+--.+.+|.|-++..+...  .........+ -....|+.+.|   +.+.|+.++.||.|++|.+..+       .+.
T Consensus       594 vAVPL~g~gG~iai~el~~PG--rLPDgv~p~l-~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe  670 (1012)
T KOG1445|consen  594 VAVPLAGSGGVIAIYELNEPG--RLPDGVMPGL-FNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPE  670 (1012)
T ss_pred             EEEEecCCCceEEEEEcCCCC--CCCccccccc-ccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcc
Confidence            334445667788777776543  2222111111 13456899999   7889999999999999999754       344


Q ss_pred             ehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECC
Q psy16373         78 FTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRF  154 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~  154 (166)
                      ..+..|...|+++.|+|- .+.+++++.|.+|++||+++.+....+.+|.+.|..++|+|  ..+++.|.||+|++|+.+
T Consensus       671 ~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Pr  750 (1012)
T KOG1445|consen  671 KILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPR  750 (1012)
T ss_pred             eeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCC
Confidence            567789999999999996 78899999999999999999999999999999999999999  489999999999999998


Q ss_pred             ccc
Q psy16373        155 QGH  157 (166)
Q Consensus       155 ~~~  157 (166)
                      +++
T Consensus       751 s~e  753 (1012)
T KOG1445|consen  751 SRE  753 (1012)
T ss_pred             CCC
Confidence            754

>KOG0299|consensus

Probab=99.73  E-value=4e-17  Score=113.17  Aligned_cols=151  Identities=13%  Similarity=0.214  Sum_probs=121.6

Q ss_pred             eEEEEecCCCceEEEeecccccceee----------ceeeeeee-eccCCceEEEEe--cCcEEEEEecCCeEEEEEccc
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTL----------TCCKVEST-RAHHQPITVLEC--VSNRVITGSQDHTLKVYKLED   73 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~-~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~   73 (166)
                      .-..++++.++.+.-|+.........          ...+...- ++|...+.+++.  ++.+|++|+.|..|.||+.++
T Consensus       154 ~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t  233 (479)
T KOG0299|consen  154 DKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDT  233 (479)
T ss_pred             ccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEecCCCceEEEecCcc
Confidence            34667788888777777644332210          01111111 378888999999  999999999999999999999


Q ss_pred             ccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-CeEEEee-cCCcEEEE
Q psy16373         74 QQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-SYVISLG-QDERLCVW  151 (166)
Q Consensus        74 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~~l~~~~-~d~~i~~w  151 (166)
                      .+.++.+.+|.+.|.+++|......+.+++.|+.+++|++.....+.++.+|.+.|..|.-.. ..++|.+ .|+++++|
T Consensus       234 ~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlw  313 (479)
T KOG0299|consen  234 LEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLW  313 (479)
T ss_pred             cchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccceeEEE
Confidence            999999999999999999988888899999999999999999999999999999999997765 5666665 89999999


Q ss_pred             ECCccc
Q psy16373        152 DRFQGH  157 (166)
Q Consensus       152 d~~~~~  157 (166)
                      ++....
T Consensus       314 Ki~ees  319 (479)
T KOG0299|consen  314 KIPEES  319 (479)
T ss_pred             eccccc
Confidence            995443

>KOG0300|consensus

Probab=99.72  E-value=2.6e-17  Score=110.15  Aligned_cols=142  Identities=18%  Similarity=0.217  Sum_probs=121.4

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcc------c-----
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLE------D-----   73 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~------~-----   73 (166)
                      +..+.+++.|...++|..+...       .+.++.||.+.|+++.|  .+.++++++.|++-.+|...      .     
T Consensus       160 qpi~gtASADhTA~iWs~Esg~-------CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~  232 (481)
T KOG0300|consen  160 QPICGTASADHTARIWSLESGA-------CLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPS  232 (481)
T ss_pred             CcceeecccccceeEEeecccc-------ceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCC
Confidence            3477888899999999876443       34567899999999999  77889999999999999621      0     


Q ss_pred             -------------------------c----cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec
Q psy16373         74 -------------------------Q----QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA  124 (166)
Q Consensus        74 -------------------------~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~  124 (166)
                                               +    .++..+.+|.+.|.+..|-..+..+++++.|.+..+||+++++++..+.+
T Consensus       233 ~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtG  312 (481)
T KOG0300|consen  233 DHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTG  312 (481)
T ss_pred             CCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccC
Confidence                                     0    13456778999999999999999999999999999999999999999999


Q ss_pred             ccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373        125 HDGCIHALTYSD--SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       125 ~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~  155 (166)
                      |....+.+.-+|  ..+++++.|.+.++||.+.
T Consensus       313 Hd~ELtHcstHptQrLVvTsSrDtTFRLWDFRe  345 (481)
T KOG0300|consen  313 HDSELTHCSTHPTQRLVVTSSRDTTFRLWDFRE  345 (481)
T ss_pred             cchhccccccCCcceEEEEeccCceeEeccchh
Confidence            999999999988  4889999999999999983

>KOG1273|consensus

Probab=99.71  E-value=4e-16  Score=104.22  Aligned_cols=117  Identities=17%  Similarity=0.292  Sum_probs=96.3

Q ss_pred             eEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec
Q psy16373         47 ITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA  124 (166)
Q Consensus        47 i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~  124 (166)
                      ..|+.|  -|.+|++|+.||.|.+||+.+....+.+.+|.-+|++++|+++|+.+++++.|..+.+||+..+.+++.+.-
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf  105 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRF  105 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEc
Confidence            678888  799999999999999999999998889999999999999999999999999999999999998877665531


Q ss_pred             ccccEEEE-----------------------------------------------EEcC--CeEEEeecCCcEEEEECCc
Q psy16373        125 HDGCIHAL-----------------------------------------------TYSD--SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       125 ~~~~v~~i-----------------------------------------------~~~~--~~l~~~~~d~~i~~wd~~~  155 (166)
                       .++|+..                                               .|++  .++++|...|.+.++|..+
T Consensus       106 -~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t  184 (405)
T KOG1273|consen  106 -DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAET  184 (405)
T ss_pred             -cCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecch
Confidence             1111111                                               1222  4888999999999999988


Q ss_pred             ccceeeeee
Q psy16373        156 GHLLSTIQL  164 (166)
Q Consensus       156 ~~~~~~~~~  164 (166)
                      -+++..++.
T Consensus       185 ~e~vas~ri  193 (405)
T KOG1273|consen  185 LECVASFRI  193 (405)
T ss_pred             heeeeeeee
Confidence            887776653

>KOG0639|consensus

Probab=99.70  E-value=1e-16  Score=112.81  Aligned_cols=153  Identities=18%  Similarity=0.300  Sum_probs=117.3

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      .+..+++|+....+-+|++..... .+    ...+..-.....+++.  +.+..+++..||.|.|||+.+...++.|++|
T Consensus       476 dgrtLivGGeastlsiWDLAapTp-ri----kaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGh  550 (705)
T KOG0639|consen  476 DGRTLIVGGEASTLSIWDLAAPTP-RI----KAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGH  550 (705)
T ss_pred             CCceEEeccccceeeeeeccCCCc-ch----hhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCC
Confidence            455677777888888999854321 11    1111111112333444  8888999999999999999999999999999


Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE----------------------------------------Eee
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY----------------------------------------SIQ  123 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~----------------------------------------~~~  123 (166)
                      .+.+.|+.++++|..+.+|+.|.+++-||++.++.+.                                        .+.
T Consensus       551 tDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlh  630 (705)
T KOG0639|consen  551 TDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLH  630 (705)
T ss_pred             CCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCccceeec
Confidence            9999999999999999999999999999998765321                                        122


Q ss_pred             cccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373        124 AHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       124 ~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      -|++.|.++.|.+  .++++.+.|+.+..|..-.|..+++.+
T Consensus       631 lheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqsk  672 (705)
T KOG0639|consen  631 LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK  672 (705)
T ss_pred             ccccEEEEEEecccCceeeecCchhhhhhccCccccceeecc
Confidence            4677899999987  689999999999999988887776543

>KOG1034|consensus

Probab=99.70  E-value=7.6e-17  Score=107.96  Aligned_cols=141  Identities=13%  Similarity=0.249  Sum_probs=114.4

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehh--
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTL--   80 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~--   80 (166)
                      ....++.|+.-|+|++-+.....       ....+.+|...|+.+.+   .+++++++|.|..|++|++++..++..+  
T Consensus       104 ~~p~la~~G~~GvIrVid~~~~~-------~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG  176 (385)
T KOG1034|consen  104 GNPFLAAGGYLGVIRVIDVVSGQ-------CSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGG  176 (385)
T ss_pred             CCeeEEeecceeEEEEEecchhh-------hccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecc
Confidence            35667777788899887765432       33456799999999999   6789999999999999999999888766  


Q ss_pred             -cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee-------------------------eE---EeecccccEEE
Q psy16373         81 -HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC-------------------------MY---SIQAHDGCIHA  131 (166)
Q Consensus        81 -~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~-------------------------~~---~~~~~~~~v~~  131 (166)
                       .+|.+.|.++.|++++.++++++.|.++++|++...+-                         ..   +-.-|+..|-+
T Consensus       177 ~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDC  256 (385)
T KOG1034|consen  177 VEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDC  256 (385)
T ss_pred             cccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHH
Confidence             46999999999999999999999999999999862210                         00   11236667777


Q ss_pred             EEEcCCeEEEeecCCcEEEEEC
Q psy16373        132 LTYSDSYVISLGQDERLCVWDR  153 (166)
Q Consensus       132 i~~~~~~l~~~~~d~~i~~wd~  153 (166)
                      +.|-.+++++=+.++.|..|..
T Consensus       257 vrw~gd~ilSkscenaI~~w~p  278 (385)
T KOG1034|consen  257 VRWFGDFILSKSCENAIVCWKP  278 (385)
T ss_pred             HHHHhhheeecccCceEEEEec
Confidence            8888889999999999999987

>KOG1539|consensus

Probab=99.70  E-value=4e-16  Score=115.06  Aligned_cols=157  Identities=22%  Similarity=0.260  Sum_probs=131.0

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      +..++..+.|.+.|.|..++++..-...    .-..-+.|..+|..++.  -++.+++++.+|.++.||+.+...+..++
T Consensus       457 s~CGNF~~IG~S~G~Id~fNmQSGi~r~----sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~  532 (910)
T KOG1539|consen  457 SFCGNFVFIGYSKGTIDRFNMQSGIHRK----SFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLR  532 (910)
T ss_pred             eccCceEEEeccCCeEEEEEcccCeeec----ccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeec
Confidence            5567788889999999888876543111    11122589999999999  56679999999999999999887766665


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                       -...+.++.++.....++.+..|-.|+++|..+.+.++.|.+|...|++++|+|  .++++++.|++|++||+-++..+
T Consensus       533 -l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lI  611 (910)
T KOG1539|consen  533 -LGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLI  611 (910)
T ss_pred             -cCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCccee
Confidence             345678888888888999999999999999999999999999999999999999  49999999999999999999988


Q ss_pred             eeeeec
Q psy16373        160 STIQLQ  165 (166)
Q Consensus       160 ~~~~~~  165 (166)
                      -.+.++
T Consensus       612 D~~~vd  617 (910)
T KOG1539|consen  612 DGLLVD  617 (910)
T ss_pred             eeEecC
Confidence            766543

>KOG1274|consensus

Probab=99.70  E-value=1.5e-15  Score=113.03  Aligned_cols=152  Identities=21%  Similarity=0.295  Sum_probs=129.3

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG   85 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~   85 (166)
                      ++-.+++++.++.++.|+.....+.+.      ++..+...|.+++...++|++|+.++.|.+|.+.+++.-..+....-
T Consensus        24 ~gefi~tcgsdg~ir~~~~~sd~e~P~------ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~iL~Rftl   97 (933)
T KOG1274|consen   24 DGEFICTCGSDGDIRKWKTNSDEEEPE------TIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEEDTILARFTL   97 (933)
T ss_pred             CCCEEEEecCCCceEEeecCCcccCCc------hhhccCceeEEEeecccceEEeeccceEEEeeCCCCCccceeeeeec
Confidence            345789999999999998765532221      22237788999999888999999999999999998876555555677


Q ss_pred             ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373         86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      ++.+++++.+|.+++.|+.|-.|++.++.+......+++|.++|.++.|+|  .+|++.+.||.|++||+.++....++.
T Consensus        98 p~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~  177 (933)
T KOG1274|consen   98 PIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLT  177 (933)
T ss_pred             cceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcc
Confidence            899999999999999999999999999999999999999999999999999  599999999999999999988776553

>KOG2445|consensus

Probab=99.69  E-value=1.7e-15  Score=100.85  Aligned_cols=123  Identities=15%  Similarity=0.198  Sum_probs=99.8

Q ss_pred             eccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc----cceehhcCCCCceEEEEE-cCC-CCEEEEecCCCcEEEEe
Q psy16373         41 RAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ----QLLFTLHGHCGPITTLFI-DGV-SMMSGSGSQDGLLCVWD  112 (166)
Q Consensus        41 ~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~----~~~~~~~~~~~~v~~~~~-~~~-~~~~~~~~~d~~v~~~d  112 (166)
                      .+|.+-|+++.|  .|+.+++|+.|++|+|||..+.    .+....+.|.+.|..+.| +|. |+.+++++.|+++.||.
T Consensus        10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE   89 (361)
T KOG2445|consen   10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE   89 (361)
T ss_pred             cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence            378899999999  8999999999999999997543    444566789999999998 555 99999999999999996


Q ss_pred             Cc---------CCeeeEEeecccccEEEEEEcCC----eEEEeecCCcEEEEECCcccceeeee
Q psy16373        113 TV---------TGACMYSIQAHDGCIHALTYSDS----YVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       113 ~~---------~~~~~~~~~~~~~~v~~i~~~~~----~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      -.         ......++...++.|+++.|.|.    .|++++.||.+++|+.-..-.+...+
T Consensus        90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~  153 (361)
T KOG2445|consen   90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWT  153 (361)
T ss_pred             ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccch
Confidence            41         22344566677889999999993    78999999999999886655544433

>KOG4378|consensus

Probab=99.69  E-value=9.8e-16  Score=107.81  Aligned_cols=149  Identities=12%  Similarity=0.207  Sum_probs=123.4

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC-C
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH-C   84 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~-~   84 (166)
                      .++++|+.++++++|+.....       ..+.+++|...|+++.+  ...+|++++..|.|.+..+.++....+|... .
T Consensus        92 ~y~~sgG~~~~Vkiwdl~~kl-------~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sg  164 (673)
T KOG4378|consen   92 LYEISGGQSGCVKIWDLRAKL-------IHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSG  164 (673)
T ss_pred             eeeeccCcCceeeehhhHHHH-------HhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCC
Confidence            578899999999999986332       33467799999999999  7889999999999999999998877777644 3


Q ss_pred             CceEEEEEcCCC-CEEEEecCCCcEEEEeCcCCeeeEEe-ecccccEEEEEEcC---CeEEEeecCCcEEEEECCcccce
Q psy16373         85 GPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSI-QAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        85 ~~v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      ..|.-+.|+|.. .++.+++++|.|.+||+....++..+ ..|..+...|+|+|   ..+++.+.|..|.+||.+..+..
T Consensus       165 qsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~  244 (673)
T KOG4378|consen  165 QSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQAST  244 (673)
T ss_pred             CeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeeccccccc
Confidence            345688999984 46677899999999999887777665 56899999999998   38999999999999999977766


Q ss_pred             eeee
Q psy16373        160 STIQ  163 (166)
Q Consensus       160 ~~~~  163 (166)
                      ..+.
T Consensus       245 ~~l~  248 (673)
T KOG4378|consen  245 DRLT  248 (673)
T ss_pred             ceee
Confidence            5554

>KOG1188|consensus

Probab=99.68  E-value=1.3e-15  Score=102.43  Aligned_cols=144  Identities=13%  Similarity=0.221  Sum_probs=111.0

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe----cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC----VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      +.+.++++-+.+.+++++....       ..+..++++...++.+.|    .+..+.+|+.||+|++||++.......+.
T Consensus        39 ~e~~vav~lSngsv~lyd~~tg-------~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~  111 (376)
T KOG1188|consen   39 FETAVAVSLSNGSVRLYDKGTG-------QLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARIS  111 (376)
T ss_pred             cceeEEEEecCCeEEEEeccch-------hhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhhee
Confidence            4466778888888888876542       345567788888899999    46789999999999999999876554443


Q ss_pred             --CCC-CceEEEEEcCCCCEEEEecC----CCcEEEEeCcCCee-eEEe-ecccccEEEEEEcC---CeEEEeecCCcEE
Q psy16373         82 --GHC-GPITTLFIDGVSMMSGSGSQ----DGLLCVWDTVTGAC-MYSI-QAHDGCIHALTYSD---SYVISLGQDERLC  149 (166)
Q Consensus        82 --~~~-~~v~~~~~~~~~~~~~~~~~----d~~v~~~d~~~~~~-~~~~-~~~~~~v~~i~~~~---~~l~~~~~d~~i~  149 (166)
                        .+. .+-.+++.+-.++.+++|..    +-.+.+||+|..+. +..+ ..|...|+.+.|+|   +.|++|+.||.+.
T Consensus       112 ~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvn  191 (376)
T KOG1188|consen  112 WTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVN  191 (376)
T ss_pred             ccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEE
Confidence              333 35567776656778877743    56899999998765 5554 56889999999998   6999999999999


Q ss_pred             EEECCcc
Q psy16373        150 VWDRFQG  156 (166)
Q Consensus       150 ~wd~~~~  156 (166)
                      +||++..
T Consensus       192 lfD~~~d  198 (376)
T KOG1188|consen  192 LFDTKKD  198 (376)
T ss_pred             eeecCCC
Confidence            9998754

>KOG1274|consensus

Probab=99.68  E-value=1.8e-15  Score=112.56  Aligned_cols=153  Identities=22%  Similarity=0.236  Sum_probs=128.6

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      ....+|++|+.++.+..+.....+...       .+...+-++.++++  +|++++.|+.|-.|++.+..+......+++
T Consensus        64 ~~s~~f~~~s~~~tv~~y~fps~~~~~-------iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrg  136 (933)
T KOG1274|consen   64 CYSNHFLTGSEQNTVLRYKFPSGEEDT-------ILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRG  136 (933)
T ss_pred             ecccceEEeeccceEEEeeCCCCCccc-------eeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecc
Confidence            345689999999999988876654332       22344567889999  788999999999999999999999999999


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec--------ccccEEEEEEcC--CeEEEeecCCcEEEEE
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA--------HDGCIHALTYSD--SYVISLGQDERLCVWD  152 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~--------~~~~v~~i~~~~--~~l~~~~~d~~i~~wd  152 (166)
                      |.++|.++.++|.++++|+.+.||.|++||+.++.....+.+        ....+..++|+|  ..++..+.|+.|++|+
T Consensus       137 h~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~  216 (933)
T KOG1274|consen  137 HDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYS  216 (933)
T ss_pred             cCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEc
Confidence            999999999999999999999999999999998877666532        134678899999  4888999999999999


Q ss_pred             CCcccceeeeee
Q psy16373        153 RFQGHLLSTIQL  164 (166)
Q Consensus       153 ~~~~~~~~~~~~  164 (166)
                      ...++..+.+..
T Consensus       217 r~~we~~f~Lr~  228 (933)
T KOG1274|consen  217 RKGWELQFKLRD  228 (933)
T ss_pred             cCCceeheeecc
Confidence            999888877654

>KOG1445|consensus

Probab=99.68  E-value=3.9e-16  Score=112.82  Aligned_cols=151  Identities=16%  Similarity=0.196  Sum_probs=119.3

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      |..-.++.+.+++.|++|....+.-......+...+..|...|+++.|   ..+.|++++.|.+|++||+.+++....+.
T Consensus       638 FD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~  717 (1012)
T KOG1445|consen  638 FDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLV  717 (1012)
T ss_pred             CChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheec
Confidence            455678999999999999997765555555667778899999999999   67899999999999999999999999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe-eeEEeeccc-ccEEEEEEc--CCeEEEeecC----CcEEEEEC
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA-CMYSIQAHD-GCIHALTYS--DSYVISLGQD----ERLCVWDR  153 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~-~~~~~~~~~-~~v~~i~~~--~~~l~~~~~d----~~i~~wd~  153 (166)
                      +|++.|.+++|+|+|+.+++.+.||++++|+.++++ +++.-.+.. ..--.|.|.  ..++++.+.|    +.|.+||.
T Consensus       718 gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~A  797 (1012)
T KOG1445|consen  718 GHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDA  797 (1012)
T ss_pred             cCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhh
Confidence            999999999999999999999999999999998764 333322211 122234453  3566666655    45777776


Q ss_pred             Cc
Q psy16373        154 FQ  155 (166)
Q Consensus       154 ~~  155 (166)
                      .+
T Consensus       798 q~  799 (1012)
T KOG1445|consen  798 QT  799 (1012)
T ss_pred             hh
Confidence            54

>KOG2096|consensus

Probab=99.68  E-value=3.6e-15  Score=99.93  Aligned_cols=147  Identities=15%  Similarity=0.261  Sum_probs=113.1

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceee--ee---eeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceeh
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCK--VE---STRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFT   79 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~   79 (166)
                      +..++....+..++++.+....+.......  ..   .-+.|..++-.+-.  .+.+|++++.|..|.+|+++ |+.+..
T Consensus       145 ~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~  223 (420)
T KOG2096|consen  145 KSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQS  223 (420)
T ss_pred             ceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeee
Confidence            345666667777877777655443332211  11   11245566666655  67789999999999999999 888888


Q ss_pred             hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc---CC-----eeeEEeecccccEEEEEEcC--CeEEEeecCCcEE
Q psy16373         80 LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV---TG-----ACMYSIQAHDGCIHALTYSD--SYVISLGQDERLC  149 (166)
Q Consensus        80 ~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~---~~-----~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~  149 (166)
                      +......-+..+++|+|+++++++.-..+++|.+-   .|     ..+.++++|.+.|..++|++  ..+++.+.||+++
T Consensus       224 idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wr  303 (420)
T KOG2096|consen  224 IDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWR  303 (420)
T ss_pred             eccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEE
Confidence            87777777888999999999999999999999863   22     34667899999999999998  4899999999999


Q ss_pred             EEECC
Q psy16373        150 VWDRF  154 (166)
Q Consensus       150 ~wd~~  154 (166)
                      +||+.
T Consensus       304 iwdtd  308 (420)
T KOG2096|consen  304 IWDTD  308 (420)
T ss_pred             Eeecc
Confidence            99974

>KOG0321|consensus

Probab=99.68  E-value=7.3e-16  Score=110.91  Aligned_cols=154  Identities=18%  Similarity=0.230  Sum_probs=113.9

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceeh--hc
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFT--LH   81 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~--~~   81 (166)
                      .+-.|+.+..+|-+.+++...... ............|...|..+.|  ....|++++.|.+++.||++..++...  +.
T Consensus        63 ~eHiLavadE~G~i~l~dt~~~~f-r~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~  141 (720)
T KOG0321|consen   63 KEHILAVADEDGGIILFDTKSIVF-RLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNL  141 (720)
T ss_pred             ccceEEEecCCCceeeecchhhhc-chhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeec
Confidence            455677777777777766543221 1111223445689999999999  556799999999999999999988766  88


Q ss_pred             CCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCe--------------------ee-------EEeeccc----ccE
Q psy16373         82 GHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGA--------------------CM-------YSIQAHD----GCI  129 (166)
Q Consensus        82 ~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~--------------------~~-------~~~~~~~----~~v  129 (166)
                      +|.+.|.+++|.|. ...|++|+.||.+.|||++-..                    +.       ....++.    +.|
T Consensus       142 GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssv  221 (720)
T KOG0321|consen  142 GHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSV  221 (720)
T ss_pred             ccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeee
Confidence            99999999999997 6789999999999999986221                    00       0111222    246


Q ss_pred             EEEEEcC-CeEEEeec-CCcEEEEECCccccee
Q psy16373        130 HALTYSD-SYVISLGQ-DERLCVWDRFQGHLLS  160 (166)
Q Consensus       130 ~~i~~~~-~~l~~~~~-d~~i~~wd~~~~~~~~  160 (166)
                      +.+.|-. +.|++++. |+.|++||++......
T Consensus       222 Tvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~  254 (720)
T KOG0321|consen  222 TVVLFKDESTLASAGAADSTIKVWDLRKNYTAY  254 (720)
T ss_pred             EEEEEeccceeeeccCCCcceEEEeeccccccc
Confidence            6677765 68999998 9999999999866543

>KOG1408|consensus

Probab=99.68  E-value=1.3e-15  Score=111.40  Aligned_cols=146  Identities=18%  Similarity=0.346  Sum_probs=120.8

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC---
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG---   82 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~---   82 (166)
                      ..+++++.|+.+.|...+............+++  ....+..++.  ...++++++.|..|++||+++++..+.|++   
T Consensus       562 ~~MiscGADksimFr~~qk~~~g~~f~r~t~t~--~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~  639 (1080)
T KOG1408|consen  562 RKMISCGADKSIMFRVNQKASSGRLFPRHTQTL--SKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRD  639 (1080)
T ss_pred             eEEEeccCchhhheehhccccCceecccccccc--ccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeeccccc
Confidence            567888889888887766544333322222221  2345778888  667899999999999999999999999885   


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCc
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~  155 (166)
                      |.+..-.+...|.|.++++...|.++.++|..+++++..+.+|.+.|+.+.|.++  +|++.+.||.|.+|.+..
T Consensus       640 ~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~  714 (1080)
T KOG1408|consen  640 HEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL  714 (1080)
T ss_pred             CCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceEEEEECch
Confidence            5567788889999999999999999999999999999999999999999999984  999999999999998754

>KOG0307|consensus

Probab=99.66  E-value=3.1e-16  Score=118.75  Aligned_cols=154  Identities=16%  Similarity=0.218  Sum_probs=117.9

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehh--cC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTL--HG   82 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~--~~   82 (166)
                      -++++|..||.|.+|+..... .......+.+...|+++|..+.|   .+++|++|+.||.|.+||+.+-+.-..+  ..
T Consensus        81 GlIaGG~edG~I~ly~p~~~~-~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~  159 (1049)
T KOG0307|consen   81 GLIAGGLEDGNIVLYDPASII-ANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQA  159 (1049)
T ss_pred             ceeeccccCCceEEecchhhc-cCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCC
Confidence            368999999999999986531 12223345566789999999999   6779999999999999999875433333  12


Q ss_pred             CCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeEEeecccc--cEEEEEEcCC---eEEEeecC---CcEEEEEC
Q psy16373         83 HCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDG--CIHALTYSDS---YVISLGQD---ERLCVWDR  153 (166)
Q Consensus        83 ~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~--~v~~i~~~~~---~l~~~~~d---~~i~~wd~  153 (166)
                      ..+.|.+++|+.. ...|++++.+|.+.|||+|..+++-.+..+..  .+..++|+|+   .+++++.|   -.|.+||+
T Consensus       160 ~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDl  239 (1049)
T KOG0307|consen  160 PPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDL  239 (1049)
T ss_pred             CcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecc
Confidence            4567999999887 77889999999999999999988887766544  4788999994   67777765   35999998


Q ss_pred             Ccc-cceeee
Q psy16373        154 FQG-HLLSTI  162 (166)
Q Consensus       154 ~~~-~~~~~~  162 (166)
                      |.- .+++.+
T Consensus       240 R~assP~k~~  249 (1049)
T KOG0307|consen  240 RFASSPLKIL  249 (1049)
T ss_pred             cccCCchhhh
Confidence            763 344444

>KOG1007|consensus

Probab=99.66  E-value=3.9e-15  Score=98.49  Aligned_cols=143  Identities=14%  Similarity=0.156  Sum_probs=105.5

Q ss_pred             CceEEEeecccccceeeceeeeeeeeccCCceEEEEe----cCcEEEEEecCCeEEEEEcccccceehhc-CCCCceEEE
Q psy16373         16 GSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC----VSNRVITGSQDHTLKVYKLEDQQLLFTLH-GHCGPITTL   90 (166)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~d~~v~v~~~~~~~~~~~~~-~~~~~v~~~   90 (166)
                      +..+.+|.+........ ..+...-.++....++-+|    +++.+++. .|+++..||+++.+....+. +|...|..+
T Consensus       143 dn~i~l~~l~ess~~va-ev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dAHgq~vrdl  220 (370)
T KOG1007|consen  143 DNNIVLWSLDESSKIVA-EVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDAHGQRVRDL  220 (370)
T ss_pred             cCceEEEEcccCcchhe-eecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhhhcceeeec
Confidence            56677777755443111 1011011123445566666    55666664 58999999999887766654 688889999


Q ss_pred             EEcCC-CCEEEEecCCCcEEEEeCcC-CeeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCccccee
Q psy16373         91 FIDGV-SMMSGSGSQDGLLCVWDTVT-GACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus        91 ~~~~~-~~~~~~~~~d~~v~~~d~~~-~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      .|+|. ...+++|++||.|++||.|. ..++..+.+|.-.|+++.|+|   ..+++++.|..|.+|...+-...+
T Consensus       221 DfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~  295 (370)
T KOG1007|consen  221 DFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQ  295 (370)
T ss_pred             cCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEecccccccc
Confidence            99998 56789999999999999984 578899999999999999998   489999999999999876544333

>KOG0322|consensus

Probab=99.65  E-value=1.3e-15  Score=99.52  Aligned_cols=148  Identities=16%  Similarity=0.232  Sum_probs=116.2

Q ss_pred             ceEEEEecCCCceEEEeecccccce---eeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccc----
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEM---TLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQL----   76 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~----   76 (166)
                      ...++++|-.++.+..|+.......   ....+.......|..+|.++.+  .-+.=++|+.+..+..|.+.....    
T Consensus       164 s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~  243 (323)
T KOG0322|consen  164 STFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQI  243 (323)
T ss_pred             ceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccc
Confidence            3567888889999999998765211   1111223334579999999999  344556788888899998875411    


Q ss_pred             eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEEC
Q psy16373         77 LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDR  153 (166)
Q Consensus        77 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~  153 (166)
                      ..++.-....|..+.+.||++.+++++.|+.+++|+.++..++..++-|.+.|++++|+|  +.++.++.|..|.+|++
T Consensus       244 ~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  244 RKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             cceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            122223456689999999999999999999999999999999999999999999999999  48999999999999986

>KOG0644|consensus

Probab=99.65  E-value=7.1e-17  Score=119.33  Aligned_cols=116  Identities=26%  Similarity=0.460  Sum_probs=108.7

Q ss_pred             eeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373         37 VESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        37 ~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~  114 (166)
                      +..+.+|...|.|..|  .+.++++|+.|..|+||..+++.++..+.+|.+.|+.++.+....++++++.|..|++|.++
T Consensus       183 ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~  262 (1113)
T KOG0644|consen  183 IKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLP  262 (1113)
T ss_pred             HHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecC
Confidence            3446789999999999  89999999999999999999999999999999999999999998999999999999999999


Q ss_pred             CCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECC
Q psy16373        115 TGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRF  154 (166)
Q Consensus       115 ~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~  154 (166)
                      .+.++..+++|++.|++++|+|..  +.+.||++++||.+
T Consensus       263 ~~~pvsvLrghtgavtaiafsP~~--sss~dgt~~~wd~r  300 (1113)
T KOG0644|consen  263 DGAPVSVLRGHTGAVTAIAFSPRA--SSSDDGTCRIWDAR  300 (1113)
T ss_pred             CCchHHHHhccccceeeeccCccc--cCCCCCceEecccc
Confidence            999999999999999999999943  77889999999988

>KOG1408|consensus

Probab=99.65  E-value=4.5e-15  Score=108.64  Aligned_cols=155  Identities=24%  Similarity=0.348  Sum_probs=122.9

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-----cCcEEEEEecCCeEEEEEcccc-cce
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-----VSNRVITGSQDHTLKVYKLEDQ-QLL   77 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~l~~~~~d~~v~v~~~~~~-~~~   77 (166)
                      ++.+-++++|...|.++++++...+.       .-+.+.|...|.|+.+     ...+|++++.|..|+++|+... .++
T Consensus       468 Sp~gqhLAsGDr~GnlrVy~Lq~l~~-------~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~  540 (1080)
T KOG1408|consen  468 SPDGQHLASGDRGGNLRVYDLQELEY-------TCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLV  540 (1080)
T ss_pred             CCCcceecccCccCceEEEEehhhhh-------hhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchh
Confidence            56678999999999999999876542       2255689999999999     4567999999999999998633 222


Q ss_pred             ehhcCCC-------------------------------------------------CceEEEEEcCCCCEEEEecCCCcE
Q psy16373         78 FTLHGHC-------------------------------------------------GPITTLFIDGVSMMSGSGSQDGLL  108 (166)
Q Consensus        78 ~~~~~~~-------------------------------------------------~~v~~~~~~~~~~~~~~~~~d~~v  108 (166)
                      +++.+|.                                                 ..+..+++.|...++++++.|+.|
T Consensus       541 qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrni  620 (1080)
T KOG1408|consen  541 QTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNI  620 (1080)
T ss_pred             hhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccce
Confidence            2332222                                                 235677888888899999999999


Q ss_pred             EEEeCcCCeeeEEeec---ccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        109 CVWDTVTGACMYSIQA---HDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       109 ~~~d~~~~~~~~~~~~---~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      +|||+.+++..+.|++   |++....+..+|  .++++.+.|+++.++|..+|+++.+...+
T Consensus       621 rif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GH  682 (1080)
T KOG1408|consen  621 RIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGH  682 (1080)
T ss_pred             EEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCc
Confidence            9999999999999975   456677788888  49999999999999999999998766543

>KOG0640|consensus

Probab=99.65  E-value=1.5e-14  Score=96.70  Aligned_cols=145  Identities=17%  Similarity=0.238  Sum_probs=112.9

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc-C
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH-G   82 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~-~   82 (166)
                      .+-.++.|.+-.++++++.+..+- .   ....+-.+|++.|+++.+  .+++.++++.||.|++||--+++++.++. .
T Consensus       227 sGefllvgTdHp~~rlYdv~T~Qc-f---vsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~A  302 (430)
T KOG0640|consen  227 SGEFLLVGTDHPTLRLYDVNTYQC-F---VSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNA  302 (430)
T ss_pred             CCceEEEecCCCceeEEeccceeE-e---eecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhh
Confidence            455777888888888888765431 1   112244589999999999  78899999999999999999999998886 4


Q ss_pred             CC-CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee--------------------------------------
Q psy16373         83 HC-GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ--------------------------------------  123 (166)
Q Consensus        83 ~~-~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~--------------------------------------  123 (166)
                      |. ..|.+..|..+++++++.+.|..+++|.+.+++++..+.                                      
T Consensus       303 H~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWda  382 (430)
T KOG0640|consen  303 HGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDA  382 (430)
T ss_pred             cCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccc
Confidence            54 568889999999999999999999999998888766553                                      


Q ss_pred             -----------cccccEEEEEEcC--CeEEEeecCCcEEEEECC
Q psy16373        124 -----------AHDGCIHALTYSD--SYVISLGQDERLCVWDRF  154 (166)
Q Consensus       124 -----------~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~  154 (166)
                                 +|.+.+..+..+|  ..++||+.|...++|-.+
T Consensus       383 Rtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr  426 (430)
T KOG0640|consen  383 RTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR  426 (430)
T ss_pred             cchhhhhhcccCCCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence                       4556666666666  467777777777777543

>KOG1273|consensus

Probab=99.65  E-value=1e-14  Score=97.62  Aligned_cols=143  Identities=21%  Similarity=0.232  Sum_probs=114.8

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      +.-+.++|.|..+|.+.+|+.....       ..+.+.+|..+|.+++|  +|..|+++|.|..+.+||+..+.++++++
T Consensus        32 s~~G~~lAvGc~nG~vvI~D~~T~~-------iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir  104 (405)
T KOG1273|consen   32 SRWGDYLAVGCANGRVVIYDFDTFR-------IARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR  104 (405)
T ss_pred             ccCcceeeeeccCCcEEEEEccccc-------hhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE
Confidence            4457899999999999999986543       33456799999999999  99999999999999999999876655442


Q ss_pred             CCCCc-----------------------------------------------eEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373         82 GHCGP-----------------------------------------------ITTLFIDGVSMMSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        82 ~~~~~-----------------------------------------------v~~~~~~~~~~~~~~~~~d~~v~~~d~~  114 (166)
                      - .++                                               ..+..|++.|+++.+|...|.+.++|..
T Consensus       105 f-~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~  183 (405)
T KOG1273|consen  105 F-DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAE  183 (405)
T ss_pred             c-cCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecc
Confidence            0 000                                               0122366778999999999999999999


Q ss_pred             CCeeeEEeeccc-ccEEEEEEcC--CeEEEeecCCcEEEEECC
Q psy16373        115 TGACMYSIQAHD-GCIHALTYSD--SYVISLGQDERLCVWDRF  154 (166)
Q Consensus       115 ~~~~~~~~~~~~-~~v~~i~~~~--~~l~~~~~d~~i~~wd~~  154 (166)
                      +.+++.+++--. ..|..+.++.  ..++.-+.|+.|+.|+++
T Consensus       184 t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~  226 (405)
T KOG1273|consen  184 TLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEIS  226 (405)
T ss_pred             hheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehh
Confidence            999999887544 6777777775  689999999999999986

>KOG1310|consensus

Probab=99.64  E-value=9.1e-16  Score=109.18  Aligned_cols=120  Identities=18%  Similarity=0.223  Sum_probs=104.4

Q ss_pred             eeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc-CCCCceEEEEEcCC--CCEEEEecCCCcEEEE
Q psy16373         37 VESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH-GHCGPITTLFIDGV--SMMSGSGSQDGLLCVW  111 (166)
Q Consensus        37 ~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~-~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~  111 (166)
                      ...+.||.+.|+|+.|  +|.+|++|+.|-.+.|||.-..++++.+. +|...|.++.|-|.  .+.+++|..|..|+++
T Consensus        43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lf  122 (758)
T KOG1310|consen   43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLF  122 (758)
T ss_pred             hhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEE
Confidence            3457899999999999  99999999999999999999888887775 79999999999886  6788999999999999


Q ss_pred             eCcCC----------eeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCcc
Q psy16373        112 DTVTG----------ACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQG  156 (166)
Q Consensus       112 d~~~~----------~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~  156 (166)
                      |+...          +....+..|...|-.++..|   +.++++++||+|+-+|++..
T Consensus       123 dl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREp  180 (758)
T KOG1310|consen  123 DLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREP  180 (758)
T ss_pred             ecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCC
Confidence            99742          34556677888888888876   58999999999999999874

>KOG0268|consensus

Probab=99.64  E-value=1.5e-15  Score=103.03  Aligned_cols=113  Identities=13%  Similarity=0.162  Sum_probs=95.9

Q ss_pred             CceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC-eeeE
Q psy16373         45 QPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG-ACMY  120 (166)
Q Consensus        45 ~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~-~~~~  120 (166)
                      +.|.++.|   ..+.|++++.|+.+.+||++.+.+++... -+..-+.++|+|+...++++++|..++.+|++.. .++.
T Consensus       188 Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~  266 (433)
T KOG0268|consen  188 DSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLN  266 (433)
T ss_pred             CceeEEecCCCcchheeeeccCCceEEEecccCCccceee-eeccccceecCccccceeeccccccceehhhhhhcccch
Confidence            34566666   45678889899999999999998887655 3445689999999889999999999999999966 6777


Q ss_pred             EeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccc
Q psy16373        121 SIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus       121 ~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      ..++|.+.|.+++|+|  ..+++|+.|.+|+||..+.+..
T Consensus       267 v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~S  306 (433)
T KOG0268|consen  267 VHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHS  306 (433)
T ss_pred             hhcccceeEEEeccCCCcchhccccccceEEEeecCCCcc
Confidence            8899999999999999  5899999999999999876653

>KOG2394|consensus

Probab=99.63  E-value=6.8e-15  Score=104.34  Aligned_cols=92  Identities=18%  Similarity=0.279  Sum_probs=86.1

Q ss_pred             CCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373         44 HQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS  121 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~  121 (166)
                      .+.|+..+|  ++.+|++.+.||.++|+|..+.+++..++..-+...|++|+|||+++++|++|-.|.||.+...+.+..
T Consensus       290 ~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVAR  369 (636)
T KOG2394|consen  290 EGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVAR  369 (636)
T ss_pred             cccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEe
Confidence            346788888  899999999999999999999999888888888899999999999999999999999999999999999


Q ss_pred             eecccccEEEEEEc
Q psy16373        122 IQAHDGCIHALTYS  135 (166)
Q Consensus       122 ~~~~~~~v~~i~~~  135 (166)
                      -++|++.|+.++|+
T Consensus       370 GqGHkSWVs~VaFD  383 (636)
T KOG2394|consen  370 GQGHKSWVSVVAFD  383 (636)
T ss_pred             ccccccceeeEeec
Confidence            99999999999998

>KOG1188|consensus

Probab=99.62  E-value=2.2e-14  Score=96.62  Aligned_cols=153  Identities=18%  Similarity=0.278  Sum_probs=117.3

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccC-CceEEEEe--cCcEEEEEe----cCCeEEEEEcccccc-e
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHH-QPITVLEC--VSNRVITGS----QDHTLKVYKLEDQQL-L   77 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~--~~~~l~~~~----~d~~v~v~~~~~~~~-~   77 (166)
                      .+..+.+|+.||.|++|+.+...+..     ......+. .+..|++.  .++.+++|.    .+-.|.+||++..+. +
T Consensus        83 s~h~v~s~ssDG~Vr~wD~Rs~~e~a-----~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l  157 (376)
T KOG1188|consen   83 SPHGVISCSSDGTVRLWDIRSQAESA-----RISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLL  157 (376)
T ss_pred             CCCeeEEeccCCeEEEEEeecchhhh-----heeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchh
Confidence            45678899999999999987655322     22233444 56677777  667777775    478899999998765 5


Q ss_pred             ehh-cCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCC---eeeEEeecccccEEEEEEcC---CeEEEeecCCcEE
Q psy16373         78 FTL-HGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTG---ACMYSIQAHDGCIHALTYSD---SYVISLGQDERLC  149 (166)
Q Consensus        78 ~~~-~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~---~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~  149 (166)
                      ..+ ..|...|++++|+|. .+++++|+.||.+.++|++..   ..+.....+.+.|..+.|..   +.|.+-+......
T Consensus       158 ~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~  237 (376)
T KOG1188|consen  158 RQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFA  237 (376)
T ss_pred             hhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCcee
Confidence            554 469999999999997 889999999999999999744   22333344678899999986   3799999999999


Q ss_pred             EEECCcccceeeee
Q psy16373        150 VWDRFQGHLLSTIQ  163 (166)
Q Consensus       150 ~wd~~~~~~~~~~~  163 (166)
                      +|++..+.+...++
T Consensus       238 ~~ele~~~~~~~~~  251 (376)
T KOG1188|consen  238 IYELEDGSEETWLE  251 (376)
T ss_pred             EEEccCCChhhccc
Confidence            99999888665443

>KOG1009|consensus

Probab=99.61  E-value=1.4e-14  Score=99.44  Aligned_cols=121  Identities=21%  Similarity=0.412  Sum_probs=100.8

Q ss_pred             CCceEEEEe---cCcEEEEEecCCeEEEEEccccc---------ceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEE
Q psy16373         44 HQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQ---------LLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVW  111 (166)
Q Consensus        44 ~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~  111 (166)
                      ..++.++.|   ..+.+++|+.|..|++|-+..+.         .+..+..|...|+++.|+|+|+.+++|+++|.+.+|
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW   92 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW   92 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence            457888888   34489999999999999987543         234567899999999999999999999999999999


Q ss_pred             eCc--------C--------CeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        112 DTV--------T--------GACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       112 d~~--------~--------~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      -..        +        +.....+.+|...+..++|+|  .++++++.|..+++||+..|+.+..+..
T Consensus        93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~d  163 (434)
T KOG1009|consen   93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDD  163 (434)
T ss_pred             EecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccc
Confidence            654        2        233455678999999999998  4899999999999999999998876543

>KOG1063|consensus

Probab=99.61  E-value=6.9e-15  Score=106.81  Aligned_cols=121  Identities=17%  Similarity=0.256  Sum_probs=104.8

Q ss_pred             eeeeeeccCCceEEEEe--cCcEEEEEec-----CCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcE
Q psy16373         36 KVESTRAHHQPITVLEC--VSNRVITGSQ-----DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLL  108 (166)
Q Consensus        36 ~~~~~~~~~~~i~~~~~--~~~~l~~~~~-----d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v  108 (166)
                      .+++++||...|.+++.  +++++++++.     ...|++|+..+......+.+|.-.|+.++|+|+++++++.+.|+++
T Consensus       517 Ev~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~  596 (764)
T KOG1063|consen  517 EVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTV  596 (764)
T ss_pred             hhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceE
Confidence            35567899999999999  6899999875     4568899999998888999999999999999999999999999999


Q ss_pred             EEEeCcCCe----eeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCcc
Q psy16373        109 CVWDTVTGA----CMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQG  156 (166)
Q Consensus       109 ~~~d~~~~~----~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~  156 (166)
                      .+|......    .....+.|+..|++..|+|+  +++|++.|++|++|.....
T Consensus       597 sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~  650 (764)
T KOG1063|consen  597 SLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDL  650 (764)
T ss_pred             EeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCc
Confidence            999875331    12336789999999999994  7999999999999998776

>KOG3881|consensus

Probab=99.60  E-value=2.4e-14  Score=97.96  Aligned_cols=158  Identities=15%  Similarity=0.176  Sum_probs=123.2

Q ss_pred             ceEEEEecCCC--ceEEEeecccccce-eeceeeeeeee-ccCCceEEEEe-c---CcEEEEEecCCeEEEEEcccc-cc
Q psy16373          6 HRIHLRTGSAG--SLLDFKKMQVEEEM-TLTCCKVESTR-AHHQPITVLEC-V---SNRVITGSQDHTLKVYKLEDQ-QL   76 (166)
Q Consensus         6 ~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~i~~~~~-~---~~~l~~~~~d~~v~v~~~~~~-~~   76 (166)
                      .+..+++|+..  ..+.+|+.+...+. ...+.+-..+. .-...++++.| +   ...|+++..-+.|++||.+.+ ++
T Consensus       160 ~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRP  239 (412)
T KOG3881|consen  160 DPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRP  239 (412)
T ss_pred             CCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcc
Confidence            35677889988  77888988654211 11111111110 11223567777 3   567999999999999999876 56


Q ss_pred             eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE-eecccccEEEEEEcCC--eEEEeecCCcEEEEEC
Q psy16373         77 LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS-IQAHDGCIHALTYSDS--YVISLGQDERLCVWDR  153 (166)
Q Consensus        77 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~  153 (166)
                      +..+.-...+++++...|.++.+.+|..-+.+..+|++.++.+.. +++..+.+.++..+|.  ++++++.|+.++|+|+
T Consensus       240 V~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~  319 (412)
T KOG3881|consen  240 VAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDI  319 (412)
T ss_pred             eeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeec
Confidence            777777788999999999999999999999999999999998877 8888999999999995  9999999999999999


Q ss_pred             Ccccceeeee
Q psy16373        154 FQGHLLSTIQ  163 (166)
Q Consensus       154 ~~~~~~~~~~  163 (166)
                      .+.+.+....
T Consensus       320 ktrkll~kvY  329 (412)
T KOG3881|consen  320 KTRKLLHKVY  329 (412)
T ss_pred             ccchhhhhhh
Confidence            9977766544

>KOG0321|consensus

Probab=99.60  E-value=4.3e-14  Score=102.03  Aligned_cols=146  Identities=12%  Similarity=0.089  Sum_probs=103.9

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEccccc-------
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQ-------   75 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~-------   75 (166)
                      ..-.|++.+.|..+++|+.....-     .....+.+|.+.|.+++|   +...|++|+.||.+.|||++-..       
T Consensus       111 ge~~lVsasGDsT~r~Wdvk~s~l-----~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~  185 (720)
T KOG0321|consen  111 GESLLVSASGDSTIRPWDVKTSRL-----VGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEF  185 (720)
T ss_pred             CceeEEEccCCceeeeeeecccee-----ecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHH
Confidence            456899999999999999876542     222246699999999999   88899999999999999997322       


Q ss_pred             -------------ce-------ehhcCCCCceEE---EEEcCCCCEEEEecC-CCcEEEEeCcCCeeeEEe--------e
Q psy16373         76 -------------LL-------FTLHGHCGPITT---LFIDGVSMMSGSGSQ-DGLLCVWDTVTGACMYSI--------Q  123 (166)
Q Consensus        76 -------------~~-------~~~~~~~~~v~~---~~~~~~~~~~~~~~~-d~~v~~~d~~~~~~~~~~--------~  123 (166)
                                   +.       ..-+.+...|.+   +.+..|...+++++. |+.|++||++........        .
T Consensus       186 ~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~  265 (720)
T KOG0321|consen  186 DNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYP  265 (720)
T ss_pred             hhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCcc
Confidence                         00       111223344444   455667888999887 999999999865432221        1


Q ss_pred             cc---cccEEEEEEcC--CeEEEeecCCcEEEEECCcc
Q psy16373        124 AH---DGCIHALTYSD--SYVISLGQDERLCVWDRFQG  156 (166)
Q Consensus       124 ~~---~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~  156 (166)
                      .|   .-.++++..+.  .+++..|.|+.|++||+..-
T Consensus       266 t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~  303 (720)
T KOG0321|consen  266 THSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSL  303 (720)
T ss_pred             CcccceeeeEEEEecCCCCeEEEEecCCcEEEEecccc
Confidence            22   12455566554  67888888999999999753

>KOG0644|consensus

Probab=99.59  E-value=2.4e-15  Score=111.39  Aligned_cols=147  Identities=24%  Similarity=0.378  Sum_probs=118.2

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      .++++++|++|.++++|.+....       .+....||.+.|+.++.  ++-.+++++.|..|++|-+..+.++..+.+|
T Consensus       201 tg~~Iitgsdd~lvKiwS~et~~-------~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrgh  273 (1113)
T KOG0644|consen  201 TGRYIITGSDDRLVKIWSMETAR-------CLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGH  273 (1113)
T ss_pred             ccceEeecCccceeeeeeccchh-------hhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhcc
Confidence            46789999999999999965433       34467899999999999  5667899999999999999999999999999


Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe--------------e-------------------------------
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA--------------C-------------------------------  118 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~--------------~-------------------------------  118 (166)
                      ++.|++++|+|..    +.+.||++++||.+-..              .                               
T Consensus       274 tgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~  349 (1113)
T KOG0644|consen  274 TGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLA  349 (1113)
T ss_pred             ccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhh
Confidence            9999999999954    67889999999875000              0                               


Q ss_pred             --------------------------------------eEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCccc
Q psy16373        119 --------------------------------------MYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       119 --------------------------------------~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~  157 (166)
                                                            +..+.+|...+..+.++|   ....+++.||...|||+-.|.
T Consensus       350 ~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~  429 (1113)
T KOG0644|consen  350 WRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGI  429 (1113)
T ss_pred             hhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCC
Confidence                                                  001114556777777777   367788899999999999988


Q ss_pred             ceeeee
Q psy16373        158 LLSTIQ  163 (166)
Q Consensus       158 ~~~~~~  163 (166)
                      +++.+.
T Consensus       430 pik~y~  435 (1113)
T KOG0644|consen  430 PIKHYF  435 (1113)
T ss_pred             cceeee
Confidence            887654

>KOG0290|consensus

Probab=99.59  E-value=1.2e-13  Score=91.54  Aligned_cols=135  Identities=11%  Similarity=0.124  Sum_probs=105.5

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc-------
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ-------   74 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~-------   74 (166)
                      ..+.++.+.+-|....+|+.+.....    .....+-.|...|..++|   .-+.+++.+.||+|++||++..       
T Consensus       161 ~dp~~igtSSiDTTCTiWdie~~~~~----~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIY  236 (364)
T KOG0290|consen  161 VDPNLIGTSSIDTTCTIWDIETGVSG----TVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIY  236 (364)
T ss_pred             CCcceeEeecccCeEEEEEEeecccc----ceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEe
Confidence            35778999999999999998765221    223356689999999999   3567999999999999999721       


Q ss_pred             -----------------------------------------cceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEe
Q psy16373         75 -----------------------------------------QLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWD  112 (166)
Q Consensus        75 -----------------------------------------~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d  112 (166)
                                                               .++.++++|++.|+.++|.|. ...+.++++|..+.+||
T Consensus       237 E~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWD  316 (364)
T KOG0290|consen  237 EDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWD  316 (364)
T ss_pred             cCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEe
Confidence                                                     234566889999999999998 78999999999999999


Q ss_pred             CcCCe------eeEEeecccccEEEEEEcC---CeEEEeec
Q psy16373        113 TVTGA------CMYSIQAHDGCIHALTYSD---SYVISLGQ  144 (166)
Q Consensus       113 ~~~~~------~~~~~~~~~~~v~~i~~~~---~~l~~~~~  144 (166)
                      +.+..      ++..+. .++.|+.+.|++   +.++.+..
T Consensus       317 l~q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~~  356 (364)
T KOG0290|consen  317 LQQMPRENGEDPILAYT-AGGEVNQIQWSSSQPDWIAICFG  356 (364)
T ss_pred             cccccccCCCCchhhhh-ccceeeeeeecccCCCEEEEEec
Confidence            97542      233334 467899999986   67776653

>KOG0642|consensus

Probab=99.57  E-value=1.6e-14  Score=102.68  Aligned_cols=121  Identities=22%  Similarity=0.375  Sum_probs=103.0

Q ss_pred             eeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccc--------ccceehhcCCCCceEEEEEcCCCCEEEEecCCCc
Q psy16373         38 ESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLED--------QQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGL  107 (166)
Q Consensus        38 ~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~  107 (166)
                      .++..|...|..+.|  ....|++++.|+.+.+|+++.        -+++.++++|.++|-|+++.+.+..+.+|+.||+
T Consensus       288 ~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~  367 (577)
T KOG0642|consen  288 FTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGT  367 (577)
T ss_pred             eeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCce
Confidence            356678888999999  677899999999999999942        2567889999999999999999999999999999


Q ss_pred             EEEEeCcCC----------eeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccc
Q psy16373        108 LCVWDTVTG----------ACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus       108 v~~~d~~~~----------~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      |+.|++...          .....+.+|.+.|+.+++++  +.|++++.||+++.|+.....+
T Consensus       368 I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~  430 (577)
T KOG0642|consen  368 IRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP  430 (577)
T ss_pred             eeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc
Confidence            999966411          12345789999999999987  6999999999999999876655

>KOG1272|consensus

Probab=99.56  E-value=2.2e-14  Score=100.23  Aligned_cols=141  Identities=14%  Similarity=0.250  Sum_probs=113.3

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      -+..++|++++..|.+.+-+.......       ..+..-.+.+..++.  -+..+-+|...|+|.+|.....+++..+.
T Consensus       218 LPyHfLL~~~~~~G~L~Y~DVS~GklV-------a~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiL  290 (545)
T KOG1272|consen  218 LPYHFLLVAASEAGFLKYQDVSTGKLV-------ASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKIL  290 (545)
T ss_pred             cchhheeeecccCCceEEEeechhhhh-------HHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHH
Confidence            345678999999999998887655421       222333445555555  45568889999999999999999999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEE
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWD  152 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd  152 (166)
                      +|.++|.++++.++|++++|.+.|..++|||+++-..+.++.. .-+...++++..-++.++....+.+|.
T Consensus       291 cH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~SqkglLA~~~G~~v~iw~  360 (545)
T KOG1272|consen  291 CHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKGLLALSYGDHVQIWK  360 (545)
T ss_pred             hcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec-CCCccccccccccceeeecCCeeeeeh
Confidence            9999999999999999999999999999999998887777654 456778999987667777777899994

>KOG2919|consensus

Probab=99.54  E-value=1.9e-13  Score=91.87  Aligned_cols=158  Identities=20%  Similarity=0.253  Sum_probs=115.6

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      ++.+..|++|-...+..|...........-......-.+..+-|.|+++   +...++.|+...++-++.-...+++..+
T Consensus       167 s~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~ll  246 (406)
T KOG2919|consen  167 SPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLL  246 (406)
T ss_pred             cCCCCeEeecccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeee
Confidence            4556666666655555554434443222211111112245677889999   6678999999999999999999999999


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecC-CCcEEEEeCcCC-eeeEEeecccc-cEEEEEEc--C--CeEEEeecCCcEEEEEC
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQ-DGLLCVWDTVTG-ACMYSIQAHDG-CIHALTYS--D--SYVISLGQDERLCVWDR  153 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~-d~~v~~~d~~~~-~~~~~~~~~~~-~v~~i~~~--~--~~l~~~~~d~~i~~wd~  153 (166)
                      -+|.+.|+.++|.++|+.+.+|.. |-.|..||+|.. .++..+..|.. .=..|.|.  |  .+|++|+.||.|++||+
T Consensus       247 ggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdl  326 (406)
T KOG2919|consen  247 GGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDL  326 (406)
T ss_pred             cccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEec
Confidence            999999999999999999999875 668999999955 67777777765 33456664  3  58999999999999999


Q ss_pred             Cc-ccceee
Q psy16373        154 FQ-GHLLST  161 (166)
Q Consensus       154 ~~-~~~~~~  161 (166)
                      ++ +..+..
T Consensus       327 k~~gn~~sv  335 (406)
T KOG2919|consen  327 KDLGNEVSV  335 (406)
T ss_pred             CCCCCcccc
Confidence            88 554443

>KOG1587|consensus

Probab=99.54  E-value=2.3e-13  Score=99.68  Aligned_cols=152  Identities=13%  Similarity=0.177  Sum_probs=114.8

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe----cCcEEEEEecCCeEEEEEcccc------
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC----VSNRVITGSQDHTLKVYKLEDQ------   74 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~d~~v~v~~~~~~------   74 (166)
                      +.+.++++|..+|.|.+|+........... .......|..++..+.|    .+..+++++.||.|..|+++.-      
T Consensus       253 ~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~-ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~  331 (555)
T KOG1587|consen  253 FDPNLLAGGCYNGQVVLWDLRKGSDTPPSG-LSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEG  331 (555)
T ss_pred             CCcceEEeeccCceEEEEEccCCCCCCCcc-cccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhh
Confidence            568899999999999999987665421111 11122368899999999    3356999999999999988610      


Q ss_pred             ---------------------------------------------------------cceehhcCCCCceEEEEEcCCCC
Q psy16373         75 ---------------------------------------------------------QLLFTLHGHCGPITTLFIDGVSM   97 (166)
Q Consensus        75 ---------------------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~   97 (166)
                                                                               +....+..|.++|.++.++|-+.
T Consensus       332 ~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~  411 (555)
T KOG1587|consen  332 LLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYP  411 (555)
T ss_pred             cccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCcc
Confidence                                                                     01112345778899999999865


Q ss_pred             EEEEecCCCcEEEEeCc-CCeeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCccc
Q psy16373         98 MSGSGSQDGLLCVWDTV-TGACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        98 ~~~~~~~d~~v~~~d~~-~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      .+...+.|-++++|... ...++..+..+...|++++|+|   ..++++..||.|.+||+....
T Consensus       412 k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~  475 (555)
T KOG1587|consen  412 KNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDD  475 (555)
T ss_pred             ceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccc
Confidence            55555559999999987 6677877877778899999998   378888899999999996543

>KOG2048|consensus

Probab=99.54  E-value=4.9e-13  Score=97.05  Aligned_cols=150  Identities=11%  Similarity=0.107  Sum_probs=121.8

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeec-cCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRA-HHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      ....+++|+.|+.|++|+.............+..+.. ...-|+++.+ ..+.|++|..-|+|..||...+.+++.+..|
T Consensus       165 ~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h  244 (691)
T KOG2048|consen  165 TGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTLIQSHSCH  244 (691)
T ss_pred             CccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCceEEEEcccCcchhhhhhhh
Confidence            4567899999999999999776644422222333332 4456788888 8999999999999999999999999999999


Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee----eEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCc
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC----MYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~----~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~  155 (166)
                      ...|.+++..++++++.+++.|+.+..+...+...    ......|...|.+++.-++.+++|+.|..+.+-..+.
T Consensus       245 ~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~~l~sgG~d~~l~i~~s~~  320 (691)
T KOG2048|consen  245 DADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIENALISGGRDFTLAICSSRE  320 (691)
T ss_pred             hcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecceEEecceeeEEEEccccc
Confidence            99999999999999999999999999888765532    2334567888999999999999999999988876544

>KOG4227|consensus

Probab=99.53  E-value=3.9e-13  Score=92.73  Aligned_cols=154  Identities=12%  Similarity=0.027  Sum_probs=117.5

Q ss_pred             cccceEEEEecCCCceEEEeecccccceeeceeeeeeee-ccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceeh
Q psy16373          3 KSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR-AHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFT   79 (166)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~   79 (166)
                      .+.....+++|++|...++|.+....... ..+++.... .|...|.|++|  .+.++++|..+++|.+.|+++.+.+..
T Consensus        64 FS~N~~~L~SGGDD~~~~~W~~de~~~~k-~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V  142 (609)
T KOG4227|consen   64 FSHNDRFLASGGDDMHGRVWNVDELMVRK-TPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYV  142 (609)
T ss_pred             eccCCeEEeecCCcceeeeechHHHHhhc-CCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeeee
Confidence            34557899999999999999986533211 112332222 45688999999  667899999999999999999887765


Q ss_pred             hcC--CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe-eeEE--eecccccEEEEEEcC---CeEEEeecCCcEEEE
Q psy16373         80 LHG--HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA-CMYS--IQAHDGCIHALTYSD---SYVISLGQDERLCVW  151 (166)
Q Consensus        80 ~~~--~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~-~~~~--~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~w  151 (166)
                      +..  ..+.|..+..+|..+.+++.+.++.|.+||.+... ++..  ..........+.|+|   ..|++.+..+-+.+|
T Consensus       143 ~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~  222 (609)
T KOG4227|consen  143 ANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVF  222 (609)
T ss_pred             ecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCce
Confidence            542  34589999999999999999999999999998664 2222  223345667888998   488999999999999


Q ss_pred             ECCccc
Q psy16373        152 DRFQGH  157 (166)
Q Consensus       152 d~~~~~  157 (166)
                      |++..+
T Consensus       223 D~R~~~  228 (609)
T KOG4227|consen  223 DRRMQA  228 (609)
T ss_pred             eecccc
Confidence            998654

>KOG4378|consensus

Probab=99.52  E-value=3.2e-13  Score=95.43  Aligned_cols=130  Identities=18%  Similarity=0.241  Sum_probs=107.6

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      +++.++.+++++|.+.+|+.+...+      ...-.+.|..|...++|   +..+|++.+.|..|.+||....+....+.
T Consensus       175 skr~lL~~asd~G~VtlwDv~g~sp------~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~  248 (673)
T KOG4378|consen  175 SKRFLLSIASDKGAVTLWDVQGMSP------IFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT  248 (673)
T ss_pred             ccceeeEeeccCCeEEEEeccCCCc------ccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceee
Confidence            5688999999999999999876542      22234579999999999   66789999999999999999766655544


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC-eeeEEeecccccEEEEEEcCC-eEEE
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDGCIHALTYSDS-YVIS  141 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~~-~l~~  141 (166)
                       ...+.+.++|.++|.+++.|...|.+..||+|.. .++..+.+|...|++++|-+. .+++
T Consensus       249 -y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~tvlt  309 (673)
T KOG4378|consen  249 -YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSPTVLT  309 (673)
T ss_pred             -ecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEeeecceeee
Confidence             4567899999999999999999999999999954 678888999999999999873 4443

>KOG2110|consensus

Probab=99.52  E-value=2.5e-12  Score=87.68  Aligned_cols=115  Identities=14%  Similarity=0.247  Sum_probs=95.8

Q ss_pred             ccCCceEEEEe--cCcEEEEE--ecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCc-EEEEeCcCC
Q psy16373         42 AHHQPITVLEC--VSNRVITG--SQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGL-LCVWDTVTG  116 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~~--~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~-v~~~d~~~~  116 (166)
                      .+...+.++++  .+.+++--  ...|.|.+||..+-+++..+..|++++.+++|+++|.++||+++.|+ |+++.+.++
T Consensus       127 ~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G  206 (391)
T KOG2110|consen  127 PNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEG  206 (391)
T ss_pred             CCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCc
Confidence            45566778887  44566643  24699999999999999999999999999999999999999999994 789999999


Q ss_pred             eeeEEeeccc--ccEEEEEEcC--CeEEEeecCCcEEEEECCcc
Q psy16373        117 ACMYSIQAHD--GCIHALTYSD--SYVISLGQDERLCVWDRFQG  156 (166)
Q Consensus       117 ~~~~~~~~~~--~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~  156 (166)
                      +.+..|+-..  ..|.+++|++  .+|.+.+..++|.+|.+..-
T Consensus       207 ~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~  250 (391)
T KOG2110|consen  207 QKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKV  250 (391)
T ss_pred             cEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEeccc
Confidence            9999986433  3678999999  47777788899999988653

>KOG0974|consensus

Probab=99.51  E-value=7e-13  Score=100.18  Aligned_cols=142  Identities=16%  Similarity=0.213  Sum_probs=118.8

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccccee-hh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF-TL   80 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~-~~   80 (166)
                      +....++++|+.-+-+..|+......      +. -+.+|.+.|..+.+  ++.++++.|.|.++++|++++.+... ..
T Consensus       142 s~~~~~i~~gsv~~~iivW~~~~dn~------p~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~  214 (967)
T KOG0974|consen  142 SAEELYIASGSVFGEIIVWKPHEDNK------PI-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTG  214 (967)
T ss_pred             cCcEEEEEeccccccEEEEeccccCC------cc-eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCccc
Confidence            55677889999888888888763321      11 46799999999999  99999999999999999999988765 66


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeeccc-ccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHD-GCIHALTYSD--SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~  155 (166)
                      -+|...|..+++.|.  .+++++.|-+.++|+. ++..+..+.+|. ..++.++..+  ..++|++.|+.+++||+..
T Consensus       215 fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~-~~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~  289 (967)
T KOG0974|consen  215 FGHSARVWACCFLPN--RIITVGEDCTCRVWGV-NGTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG  289 (967)
T ss_pred             ccccceeEEEEeccc--eeEEeccceEEEEEec-ccceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence            689999999999987  8999999999999975 455555777775 4788999887  4889999999999999864

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.51  E-value=1.2e-11  Score=85.27  Aligned_cols=144  Identities=11%  Similarity=0.051  Sum_probs=103.4

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEE-EEEecCCeEEEEEcccccceehhcCCC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRV-ITGSQDHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l-~~~~~d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      ..+++++.++.+.+|+.....       ....+..+. .+.+++|  ++..+ ++++.++.+++||..+++....+..+.
T Consensus         2 ~~~~s~~~d~~v~~~d~~t~~-------~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~   73 (300)
T TIGR03866         2 KAYVSNEKDNTISVIDTATLE-------VTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGP   73 (300)
T ss_pred             cEEEEecCCCEEEEEECCCCc-------eEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCC
Confidence            468899999999999875432       222334433 3566788  66665 566788999999999888777666543


Q ss_pred             CceEEEEEcCCCCEEEE-ecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCC-cEEEEECCccccee
Q psy16373         85 GPITTLFIDGVSMMSGS-GSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDE-RLCVWDRFQGHLLS  160 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~-~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~-~i~~wd~~~~~~~~  160 (166)
                      . +..++++|+++.+++ +..++.+++||+++.+.+..+.. ...+..++|+|  ..++++..++ .+..||.++++.+.
T Consensus        74 ~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~  151 (300)
T TIGR03866        74 D-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVD  151 (300)
T ss_pred             C-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEE
Confidence            3 567889999886654 45689999999998887777653 33467899998  4677776654 56778988776654


Q ss_pred             e
Q psy16373        161 T  161 (166)
Q Consensus       161 ~  161 (166)
                      .
T Consensus       152 ~  152 (300)
T TIGR03866       152 N  152 (300)
T ss_pred             E
Confidence            4

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1063|consensus

Probab=99.51  E-value=6e-13  Score=96.99  Aligned_cols=144  Identities=16%  Similarity=0.170  Sum_probs=112.2

Q ss_pred             ccceEEEEecCCCce-----EEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccc
Q psy16373          4 SVHRIHLRTGSAGSL-----LDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQL   76 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~   76 (166)
                      ++.+.+++++.....     |.+|......       ....+++|.-.|+.++|  ++.+|++.+.|.++.+|...+...
T Consensus       534 s~~gnliASaCKS~~~ehAvI~lw~t~~W~-------~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~  606 (764)
T KOG1063|consen  534 SPTGNLIASACKSSLKEHAVIRLWNTANWL-------QVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIK  606 (764)
T ss_pred             cCCCCEEeehhhhCCccceEEEEEeccchh-------hhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccc
Confidence            456777777766553     5566654332       23357899999999999  999999999999999999865422


Q ss_pred             ----eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC--eeeEE--eecccccEEEEEEcC-------CeEEE
Q psy16373         77 ----LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG--ACMYS--IQAHDGCIHALTYSD-------SYVIS  141 (166)
Q Consensus        77 ----~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~--~~~~~--~~~~~~~v~~i~~~~-------~~l~~  141 (166)
                          ....+.|+..|.+..|+|++.+++|++.|.+|++|.....  +.+..  ...+..+|+++++.|       +.++.
T Consensus       607 ~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vav  686 (764)
T KOG1063|consen  607 DEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAV  686 (764)
T ss_pred             hhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchhccCCceeeEEeeccccccccceEEE
Confidence                1235679999999999999999999999999999998776  44433  234678999999976       25677


Q ss_pred             eecCCcEEEEECC
Q psy16373        142 LGQDERLCVWDRF  154 (166)
Q Consensus       142 ~~~d~~i~~wd~~  154 (166)
                      |-+.|.|.+|...
T Consensus       687 Gle~GeI~l~~~~  699 (764)
T KOG1063|consen  687 GLEKGEIVLWRRK  699 (764)
T ss_pred             EecccEEEEEecc
Confidence            8889999999865

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.50  E-value=3.3e-12  Score=82.99  Aligned_cols=115  Identities=18%  Similarity=0.296  Sum_probs=89.3

Q ss_pred             CCceEEEEe--cCcEEEE--EecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecC---CCcEEEEeCcCC
Q psy16373         44 HQPITVLEC--VSNRVIT--GSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQ---DGLLCVWDTVTG  116 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~~--~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---d~~v~~~d~~~~  116 (166)
                      .++|.+++|  +++.|+.  |..+..+.+||++ ++.+..+.  ...++.+.|+|+|+++++++.   .|.+.+||.++.
T Consensus        59 ~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~  135 (194)
T PF08662_consen   59 EGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKK  135 (194)
T ss_pred             CCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence            457999999  6676554  4457799999997 65555553  467789999999999999864   467999999988


Q ss_pred             eeeEEeecccccEEEEEEcC--CeEEEeec------CCcEEEEECCcccceeeeee
Q psy16373        117 ACMYSIQAHDGCIHALTYSD--SYVISLGQ------DERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       117 ~~~~~~~~~~~~v~~i~~~~--~~l~~~~~------d~~i~~wd~~~~~~~~~~~~  164 (166)
                      +.+.....  ..++.++|+|  .+++++..      |+.++||+. +|+.+.+...
T Consensus       136 ~~i~~~~~--~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~-~G~~l~~~~~  188 (194)
T PF08662_consen  136 KKISTFEH--SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSF-QGRLLYKKPF  188 (194)
T ss_pred             EEeecccc--CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEe-cCeEeEecch
Confidence            88877653  3478999999  47777764      788999997 6887776654

>KOG2055|consensus

Probab=99.50  E-value=1.9e-12  Score=90.53  Aligned_cols=156  Identities=17%  Similarity=0.202  Sum_probs=124.7

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCc-EEEEEecCCeEEEEEcccccce--eh
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSN-RVITGSQDHTLKVYKLEDQQLL--FT   79 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~-~l~~~~~d~~v~v~~~~~~~~~--~~   79 (166)
                      +....+.+++.|+.++++.......     ..++.+.-...||.+.+|  +|. .+++++....++.||+.+.+..  ..
T Consensus       223 p~~plllvaG~d~~lrifqvDGk~N-----~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~  297 (514)
T KOG2055|consen  223 PTAPLLLVAGLDGTLRIFQVDGKVN-----PKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKP  297 (514)
T ss_pred             CCCceEEEecCCCcEEEEEecCccC-----hhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccccccC
Confidence            3456889999999999988754331     233344444568888888  666 8999999999999999987543  33


Q ss_pred             hcCCC-CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcc
Q psy16373         80 LHGHC-GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQG  156 (166)
Q Consensus        80 ~~~~~-~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~  156 (166)
                      ..++. ..+..+.+++++++++..+..|.|.+....+++.+.+++- .+.|..+.|+.  ..|+.++.+|.|.+||++..
T Consensus       298 ~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~Ki-eG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~  376 (514)
T KOG2055|consen  298 PYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKI-EGVVSDFTFSSDSKELLASGGTGEVYVWNLRQN  376 (514)
T ss_pred             CCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeee-ccEEeeEEEecCCcEEEEEcCCceEEEEecCCc
Confidence            44443 3567888999999999999999999999999999998874 78899999987  48888888999999999999


Q ss_pred             cceeeeeecC
Q psy16373        157 HLLSTIQLQG  166 (166)
Q Consensus       157 ~~~~~~~~~~  166 (166)
                      .++..+..+|
T Consensus       377 ~~~~rf~D~G  386 (514)
T KOG2055|consen  377 SCLHRFVDDG  386 (514)
T ss_pred             ceEEEEeecC
Confidence            9998887654

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.49  E-value=8.9e-12  Score=85.83  Aligned_cols=118  Identities=10%  Similarity=0.082  Sum_probs=87.3

Q ss_pred             eEEEEe--cCcEEE-EEecCCeEEEEEcccccceehhcCCC-------CceEEEEEcCCCCEEEE-ecCCCcEEEEeCcC
Q psy16373         47 ITVLEC--VSNRVI-TGSQDHTLKVYKLEDQQLLFTLHGHC-------GPITTLFIDGVSMMSGS-GSQDGLLCVWDTVT  115 (166)
Q Consensus        47 i~~~~~--~~~~l~-~~~~d~~v~v~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~~-~~~d~~v~~~d~~~  115 (166)
                      ..+++|  ++..++ ++..++.|.+||+++++.+..+..+.       .....++++|+++.++. ...++.+.+||+++
T Consensus       159 ~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~  238 (300)
T TIGR03866       159 PRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKT  238 (300)
T ss_pred             ccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCC
Confidence            456777  677775 44568999999999887766554221       12346889999887544 45567899999998


Q ss_pred             CeeeEEeecccccEEEEEEcC--CeEEEe-ecCCcEEEEECCcccceeeeeec
Q psy16373        116 GACMYSIQAHDGCIHALTYSD--SYVISL-GQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       116 ~~~~~~~~~~~~~v~~i~~~~--~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      ++.+..+. +...+.+++|+|  .+|+++ ..++.|.+||+++++.+.+++++
T Consensus       239 ~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~  290 (300)
T TIGR03866       239 YEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG  290 (300)
T ss_pred             CcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc
Confidence            88776553 345788999998  367665 46899999999999999888764

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG2919|consensus

Probab=99.49  E-value=7.1e-13  Score=89.18  Aligned_cols=131  Identities=17%  Similarity=0.281  Sum_probs=103.2

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEec-CCeEEEEEcccc-cceehhcCC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQ-DHTLKVYKLEDQ-QLLFTLHGH   83 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~-d~~v~v~~~~~~-~~~~~~~~~   83 (166)
                      ..++.|+.+..+-++......       +...+-+|.+.|+.+.|  +|+.|++|+. |..|..||++.. .++..+..|
T Consensus       221 ~~~a~gsY~q~~giy~~~~~~-------pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rh  293 (406)
T KOG2919|consen  221 KTLAVGSYGQRVGIYNDDGRR-------PLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERH  293 (406)
T ss_pred             cceeeecccceeeeEecCCCC-------ceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhh
Confidence            367788888877766644332       44456699999999999  8999999875 789999999864 566677766


Q ss_pred             CC---ceEEEEEcCCCCEEEEecCCCcEEEEeCcC-CeeeEEeecccccEEEEEEcC--CeEEEeecC
Q psy16373         84 CG---PITTLFIDGVSMMSGSGSQDGLLCVWDTVT-GACMYSIQAHDGCIHALTYSD--SYVISLGQD  145 (166)
Q Consensus        84 ~~---~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~-~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d  145 (166)
                      ..   .---+...|.++.+++|+.||.|++||++. +..+..+..+...++.++++|  .++++++..
T Consensus       294 v~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGq  361 (406)
T KOG2919|consen  294 VGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQ  361 (406)
T ss_pred             ccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccCc
Confidence            54   233455578899999999999999999997 677888888899999999999  577777654

>KOG2394|consensus

Probab=99.48  E-value=6.5e-13  Score=94.50  Aligned_cols=118  Identities=18%  Similarity=0.270  Sum_probs=96.2

Q ss_pred             CCceEEEEe---cCcEEEEEecCCeEEEEEcccc----------------------------cceehhcCCCCceEEEEE
Q psy16373         44 HQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ----------------------------QLLFTLHGHCGPITTLFI   92 (166)
Q Consensus        44 ~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~----------------------------~~~~~~~~~~~~v~~~~~   92 (166)
                      +..++|+.|   +...++.+-.+|.+.++|..-.                            .++..+.-..+.|+.++|
T Consensus       219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~F  298 (636)
T KOG2394|consen  219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAF  298 (636)
T ss_pred             ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeE
Confidence            468999999   6778888899999999987411                            011111122457889999


Q ss_pred             cCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCcccceee
Q psy16373         93 DGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLST  161 (166)
Q Consensus        93 ~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~~~~  161 (166)
                      +|+|.++|+.+.||.++|+|..+.+.+..++.--+...+++|+||  +|++|++|..|.+|.+...+.+..
T Consensus       299 S~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVAR  369 (636)
T KOG2394|consen  299 SPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVAR  369 (636)
T ss_pred             cCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEe
Confidence            999999999999999999999988888777766678999999994  999999999999999988887754

>KOG1272|consensus

Probab=99.48  E-value=8.1e-14  Score=97.44  Aligned_cols=119  Identities=17%  Similarity=0.287  Sum_probs=105.0

Q ss_pred             ceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee
Q psy16373         46 PITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ  123 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~  123 (166)
                      .|..+.|  ..-+|++++..|.++.-|+.+|+.+..+....+.+..++-+|....+-+|..+|+|.+|.....+++..+.
T Consensus       211 ~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiL  290 (545)
T KOG1272|consen  211 RVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKIL  290 (545)
T ss_pred             chhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHH
Confidence            3445555  33457788889999999999999999999888999999999999999999999999999999999999999


Q ss_pred             cccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        124 AHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       124 ~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .|.++|.++++++  .+++|.+.|+.++|||+++-..+.++..
T Consensus       291 cH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t  333 (545)
T KOG1272|consen  291 CHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT  333 (545)
T ss_pred             hcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec
Confidence            9999999999998  5999999999999999999877766543

>KOG2096|consensus

Probab=99.47  E-value=2.1e-12  Score=86.90  Aligned_cols=117  Identities=21%  Similarity=0.330  Sum_probs=86.5

Q ss_pred             eeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccc-----eeh-----------------------------
Q psy16373         36 KVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQL-----LFT-----------------------------   79 (166)
Q Consensus        36 ~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~-----~~~-----------------------------   79 (166)
                      .+..+++|.+.|++++|  +|.+|++++.|+.|++|+++....     ++.                             
T Consensus        78 ~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l  157 (420)
T KOG2096|consen   78 NVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKL  157 (420)
T ss_pred             hhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEE
Confidence            34557899999999999  899999999999999999973211     000                             


Q ss_pred             --h-----------------------cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEE
Q psy16373         80 --L-----------------------HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTY  134 (166)
Q Consensus        80 --~-----------------------~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~  134 (166)
                        +                       +.|+..+..+-....+.++++++.|..|.+|+++ |+.+..+......-+..+.
T Consensus       158 ~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aav  236 (420)
T KOG2096|consen  158 CVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAV  236 (420)
T ss_pred             EEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeeccccccccceee
Confidence              0                       1133344455555567788888888888888887 8778777766666667777


Q ss_pred             cC--CeEEEeecCCcEEEEEC
Q psy16373        135 SD--SYVISLGQDERLCVWDR  153 (166)
Q Consensus       135 ~~--~~l~~~~~d~~i~~wd~  153 (166)
                      +|  .++++++.--.+++|.+
T Consensus       237 SP~GRFia~~gFTpDVkVwE~  257 (420)
T KOG2096|consen  237 SPDGRFIAVSGFTPDVKVWEP  257 (420)
T ss_pred             CCCCcEEEEecCCCCceEEEE
Confidence            87  47888888788888876

>KOG0771|consensus

Probab=99.46  E-value=2.3e-12  Score=88.94  Aligned_cols=144  Identities=19%  Similarity=0.231  Sum_probs=111.9

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehh-
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTL-   80 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~-   80 (166)
                      +..+..+++|+.|+.+++|+.+...       .+.....|...|.++.|  ++.+|++-+.| ..+||+..++..+... 
T Consensus       153 ~~~gs~latgg~dg~lRv~~~Ps~~-------t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t  224 (398)
T KOG0771|consen  153 NGDGSKLATGGTDGTLRVWEWPSML-------TILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT  224 (398)
T ss_pred             cCCCCEeeeccccceEEEEecCcch-------hhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC
Confidence            3456789999999999999954332       12234578899999999  88899999999 9999999876221111 


Q ss_pred             -----------------------------------------------------cCCCCceEEEEEcCCCCEEEEecCCCc
Q psy16373         81 -----------------------------------------------------HGHCGPITTLFIDGVSMMSGSGSQDGL  107 (166)
Q Consensus        81 -----------------------------------------------------~~~~~~v~~~~~~~~~~~~~~~~~d~~  107 (166)
                                                                           ......|++++++++|++++.|+.||.
T Consensus       225 ~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGs  304 (398)
T KOG0771|consen  225 PFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGS  304 (398)
T ss_pred             CcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCc
Confidence                                                                 001236899999999999999999999


Q ss_pred             EEEEeCcCCeeeEEe-ecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373        108 LCVWDTVTGACMYSI-QAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       108 v~~~d~~~~~~~~~~-~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~  155 (166)
                      |-+++..+-+.++-. +.|...|+.+.|+|  ..+++.+.|....+..+.-
T Consensus       305 Vai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  305 VAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             EEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence            999999887766654 56889999999999  4777778888777776543

>KOG2106|consensus

Probab=99.45  E-value=6.2e-12  Score=89.09  Aligned_cols=148  Identities=18%  Similarity=0.255  Sum_probs=107.8

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeecc-CCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAH-HQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      +.++++++.+ -+.||......    ..+....++.+ ...|.|++| .+.-+++|..+|.+.+|+..+.+..+....|.
T Consensus       213 ~nliit~Gk~-H~~Fw~~~~~~----l~k~~~~fek~ekk~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~~~aH~  287 (626)
T KOG2106|consen  213 PNLIITCGKG-HLYFWTLRGGS----LVKRQGIFEKREKKFVLCVTFLENGDVITGDSGGNILIWSKGTNRISKQVHAHD  287 (626)
T ss_pred             CcEEEEeCCc-eEEEEEccCCc----eEEEeeccccccceEEEEEEEcCCCCEEeecCCceEEEEeCCCceEEeEeeecC
Confidence            4566666665 45566654332    12223333332 357999999 77889999999999999999888777777999


Q ss_pred             CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee-----------------------------------------eEEee
Q psy16373         85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC-----------------------------------------MYSIQ  123 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~-----------------------------------------~~~~~  123 (166)
                      +.|.+++.-.+|..+ +|+.|+.|..||- +-++                                         ....+
T Consensus       288 ggv~~L~~lr~Gtll-SGgKDRki~~Wd~-~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~  365 (626)
T KOG2106|consen  288 GGVFSLCMLRDGTLL-SGGKDRKIILWDD-NYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQ  365 (626)
T ss_pred             CceEEEEEecCccEe-ecCccceEEeccc-cccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEE
Confidence            999999999888766 5999999999983 1111                                         01113


Q ss_pred             cccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373        124 AHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       124 ~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      +|....+.++-+|  +.++|++.|+.+++|+  ..+++.+..
T Consensus       366 gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~  405 (626)
T KOG2106|consen  366 GHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKI  405 (626)
T ss_pred             ecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEE
Confidence            5677788888888  5999999999999999  555555544

>KOG1523|consensus

Probab=99.44  E-value=3.7e-12  Score=85.53  Aligned_cols=147  Identities=14%  Similarity=0.091  Sum_probs=116.2

Q ss_pred             cccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcc-cc--cce
Q psy16373          3 KSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLE-DQ--QLL   77 (166)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~-~~--~~~   77 (166)
                      .+.++..++.+....-+.++......    .-++.+++..|...|++++|  ..+.|++++.|..-++|... .+  ++.
T Consensus        18 wn~drt~iAv~~~~~evhiy~~~~~~----~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~Wkpt   93 (361)
T KOG1523|consen   18 WNSDRTQIAVSPNNHEVHIYSMLGAD----LWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPT   93 (361)
T ss_pred             ecCCCceEEeccCCceEEEEEecCCC----CceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccc
Confidence            45577888888888887777764432    13466788899999999999  77899999999999999994 33  445


Q ss_pred             ehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeee----EEeecccccEEEEEEcCC--eEEEeecCCcEEEE
Q psy16373         78 FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACM----YSIQAHDGCIHALTYSDS--YVISLGQDERLCVW  151 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~----~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~w  151 (166)
                      ..+..+...++++.|+|.++.|++|+..+.|.+|-.+...--    ..-+.+++.|+++.|+|+  .+++|+.|+..+++
T Consensus        94 lvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVf  173 (361)
T KOG1523|consen   94 LVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVF  173 (361)
T ss_pred             eeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEE
Confidence            556668889999999999999999999999999977644221    112446788999999995  77888889999998


Q ss_pred             EC
Q psy16373        152 DR  153 (166)
Q Consensus       152 d~  153 (166)
                      ..
T Consensus       174 Sa  175 (361)
T KOG1523|consen  174 SA  175 (361)
T ss_pred             EE
Confidence            65

>KOG0771|consensus

Probab=99.43  E-value=2.7e-12  Score=88.66  Aligned_cols=114  Identities=20%  Similarity=0.242  Sum_probs=92.8

Q ss_pred             EEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee--
Q psy16373         48 TVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ--  123 (166)
Q Consensus        48 ~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~--  123 (166)
                      .++++  ++..+++|+.||++|+|+..+...+.....|...|.++.|+|++..+++-+.| ..++|+.+++.++....  
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~  226 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF  226 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence            46666  88999999999999999988888888888899999999999999999999999 99999998772211110  


Q ss_pred             -----------------------------------------c-----------ccccEEEEEEcC--CeEEEeecCCcEE
Q psy16373        124 -----------------------------------------A-----------HDGCIHALTYSD--SYVISLGQDERLC  149 (166)
Q Consensus       124 -----------------------------------------~-----------~~~~v~~i~~~~--~~l~~~~~d~~i~  149 (166)
                                                               .           -...|++++.++  .+++.|+.||.|.
T Consensus       227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa  306 (398)
T KOG0771|consen  227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA  306 (398)
T ss_pred             ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence                                                     0           023677888887  5899999999999


Q ss_pred             EEECCcccceeee
Q psy16373        150 VWDRFQGHLLSTI  162 (166)
Q Consensus       150 ~wd~~~~~~~~~~  162 (166)
                      +++..+.+.++-+
T Consensus       307 i~~~~~lq~~~~v  319 (398)
T KOG0771|consen  307 IYDAKSLQRLQYV  319 (398)
T ss_pred             EEEeceeeeeEee
Confidence            9999887766543

>KOG4328|consensus

Probab=99.43  E-value=4.5e-12  Score=88.58  Aligned_cols=152  Identities=14%  Similarity=0.195  Sum_probs=107.0

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccce----
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLL----   77 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~----   77 (166)
                      .....++.+..=+...+|+.....      .....+.-|...|.++++   .+.+|++++.|+++++||++.-...    
T Consensus       289 ~e~~~vl~~~~~G~f~~iD~R~~~------s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~  362 (498)
T KOG4328|consen  289 AESRSVLFGDNVGNFNVIDLRTDG------SEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPF  362 (498)
T ss_pred             CCCccEEEeecccceEEEEeecCC------ccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcc
Confidence            333334444433366666655433      122344567778999999   6778999999999999999864322    


Q ss_pred             ehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc----CCeeeEEeecccc------cEEEEEEcC--CeEEEeecC
Q psy16373         78 FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV----TGACMYSIQAHDG------CIHALTYSD--SYVISLGQD  145 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~----~~~~~~~~~~~~~------~v~~i~~~~--~~l~~~~~d  145 (166)
                      .....|.-.|.+..|+|.+-.+++.+.|..|+|||..    .-++...+. |..      .....+|.|  ++++.+..-
T Consensus       363 lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~-Hn~~t~RwlT~fKA~W~P~~~li~vg~~~  441 (498)
T KOG4328|consen  363 LSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIP-HNNRTGRWLTPFKAAWDPDYNLIVVGRYP  441 (498)
T ss_pred             eecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceee-ccCcccccccchhheeCCCccEEEEeccC
Confidence            2234599999999999997779999999999999983    334444443 221      234567888  488888888


Q ss_pred             CcEEEEECCcccceeeee
Q psy16373        146 ERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       146 ~~i~~wd~~~~~~~~~~~  163 (166)
                      ..|-++|-..++.+..+.
T Consensus       442 r~IDv~~~~~~q~v~el~  459 (498)
T KOG4328|consen  442 RPIDVFDGNGGQMVCELH  459 (498)
T ss_pred             cceeEEcCCCCEEeeecc
Confidence            999999998888666543

>KOG1240|consensus

Probab=99.43  E-value=3.5e-11  Score=92.99  Aligned_cols=161  Identities=15%  Similarity=0.195  Sum_probs=116.0

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc--cc---
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ--QL---   76 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~--~~---   76 (166)
                      +.+..+|++|++||++++|+............-..++......+.++..  .++.++.++.||.|++.++...  +.   
T Consensus      1058 ~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~ 1137 (1431)
T KOG1240|consen 1058 SEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVA 1137 (1431)
T ss_pred             CCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEcccccccccee
Confidence            3445799999999999999987654332222222233334556777776  8899999999999999988631  00   


Q ss_pred             ------------------------------------------------eehh--cCCCCceEEEEEcCCCCEEEEecCCC
Q psy16373         77 ------------------------------------------------LFTL--HGHCGPITTLFIDGVSMMSGSGSQDG  106 (166)
Q Consensus        77 ------------------------------------------------~~~~--~~~~~~v~~~~~~~~~~~~~~~~~d~  106 (166)
                                                                      ...+  ....+.|++++.+|.++++++|+..|
T Consensus      1138 ~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G 1217 (1431)
T KOG1240|consen 1138 TQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRG 1217 (1431)
T ss_pred             eeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCc
Confidence                                                            0000  12346789999999999999999999


Q ss_pred             cEEEEeCcCCeeeEEeec-ccccEEEEEEcC-----CeEEEee--cCCcEEEEECCcccceeeeee
Q psy16373        107 LLCVWDTVTGACMYSIQA-HDGCIHALTYSD-----SYVISLG--QDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       107 ~v~~~d~~~~~~~~~~~~-~~~~v~~i~~~~-----~~l~~~~--~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .+.+||+|-+.++.++.. +..++..+..+|     ...++++  ..+.|.+|++.+|.....+..
T Consensus      1218 ~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~ 1283 (1431)
T KOG1240|consen 1218 QLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWA 1283 (1431)
T ss_pred             eEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcceEEEEc
Confidence            999999999998888753 456788887775     2444444  467899999999987766654

>KOG3914|consensus

Probab=99.43  E-value=6.5e-12  Score=86.44  Aligned_cols=103  Identities=17%  Similarity=0.248  Sum_probs=83.3

Q ss_pred             ecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe-ecccccEEEEEEcCC-e
Q psy16373         61 SQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI-QAHDGCIHALTYSDS-Y  138 (166)
Q Consensus        61 ~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~v~~i~~~~~-~  138 (166)
                      +....+.+|...++. ...+-+|-..+..++++|+++.++++..|+.|++-....-..+.+| -+|+.-|..++.-++ .
T Consensus       129 gD~~~~di~s~~~~~-~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~  207 (390)
T KOG3914|consen  129 GDVYSFDILSADSGR-CEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYL  207 (390)
T ss_pred             CCceeeeeecccccC-cchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCce
Confidence            445566666666533 3445679999999999999999999999999999876655545444 579999999999885 6


Q ss_pred             EEEeecCCcEEEEECCcccceeeeee
Q psy16373        139 VISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       139 l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      |++++.|++|++||+++|+.+.++.+
T Consensus       208 LlS~sGD~tlr~Wd~~sgk~L~t~dl  233 (390)
T KOG3914|consen  208 LLSGSGDKTLRLWDITSGKLLDTCDL  233 (390)
T ss_pred             eeecCCCCcEEEEecccCCcccccch
Confidence            79999999999999999999987764

>KOG1517|consensus

Probab=99.43  E-value=7.4e-12  Score=95.49  Aligned_cols=151  Identities=16%  Similarity=0.161  Sum_probs=104.8

Q ss_pred             ceEEEEecCCCceEEEeecccccceeece-eeeeeeec----cCCceEEEEe--cCcEEEEEecCCeEEEEEccccccee
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTC-CKVESTRA----HHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF   78 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~   78 (166)
                      ..-++.+|+.||.|++|+.-......... ..-..+.+    -.+.-.-+.|  ...+|++++.-..|++||.+......
T Consensus      1122 D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~ 1201 (1387)
T KOG1517|consen 1122 DDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVA 1201 (1387)
T ss_pred             chhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEe
Confidence            45578999999999999864432111000 00111111    1111134455  44555555668999999999887777


Q ss_pred             hhcC-CCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCC---eeeEEeeccccc--EEEEEEcC---CeEEEeecCCcE
Q psy16373         79 TLHG-HCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTG---ACMYSIQAHDGC--IHALTYSD---SYVISLGQDERL  148 (166)
Q Consensus        79 ~~~~-~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~---~~~~~~~~~~~~--v~~i~~~~---~~l~~~~~d~~i  148 (166)
                      .+.. ....++++.-+.. |+.++.|..||.+++||.|..   ..+...+.|...  |..+.+.+   +.|++++.||.|
T Consensus      1202 diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I 1281 (1387)
T KOG1517|consen 1202 DIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDI 1281 (1387)
T ss_pred             ecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeE
Confidence            6653 3455777765443 799999999999999999854   356667778776  99999987   479999999999


Q ss_pred             EEEECCcc
Q psy16373        149 CVWDRFQG  156 (166)
Q Consensus       149 ~~wd~~~~  156 (166)
                      ++||+|..
T Consensus      1282 ~~~DlR~~ 1289 (1387)
T KOG1517|consen 1282 QLLDLRMS 1289 (1387)
T ss_pred             EEEecccC
Confidence            99999984

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.43  E-value=5.2e-11  Score=84.62  Aligned_cols=139  Identities=24%  Similarity=0.398  Sum_probs=111.5

Q ss_pred             cCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEec-CCeEEEEEcccccceehhcCCCCceEE
Q psy16373         13 GSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQ-DHTLKVYKLEDQQLLFTLHGHCGPITT   89 (166)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~-d~~v~v~~~~~~~~~~~~~~~~~~v~~   89 (166)
                      +..++.+.+|+...      .......+..|...|..+++  ++..+++++. |+.+++|+...++.+..+.+|...+.+
T Consensus       130 ~~~d~~~~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  203 (466)
T COG2319         130 SSLDGTVKLWDLST------PGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSS  203 (466)
T ss_pred             CCCCccEEEEEecC------CCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEE
Confidence            34477888888654      11334456789999999999  5667888875 999999999998888888889999999


Q ss_pred             EEEcCCCC-EEEEecCCCcEEEEeCcCCeeeE-EeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccc
Q psy16373         90 LFIDGVSM-MSGSGSQDGLLCVWDTVTGACMY-SIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus        90 ~~~~~~~~-~~~~~~~d~~v~~~d~~~~~~~~-~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      ++++|++. .+++++.|+.+++||.+.+..+. .+..|.... ...|++  ..+++++.|+.+++|+.+....
T Consensus       204 ~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  275 (466)
T COG2319         204 LAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS  275 (466)
T ss_pred             EEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc
Confidence            99999887 55555999999999998787777 677777764 337877  3788899999999999987665

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.42  E-value=8.2e-11  Score=83.62  Aligned_cols=146  Identities=23%  Similarity=0.444  Sum_probs=113.2

Q ss_pred             EEEecCC-CceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCc-EEEEEecCCeEEEEEccccccee-hhcCC
Q psy16373          9 HLRTGSA-GSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSN-RVITGSQDHTLKVYKLEDQQLLF-TLHGH   83 (166)
Q Consensus         9 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~-~l~~~~~d~~v~v~~~~~~~~~~-~~~~~   83 (166)
                      .++.++. ++.+.+|+....       .....+.+|...+.++++  ++. .+++++.|+.+++||...+.... .+..|
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~  241 (466)
T COG2319         169 LLASGSSLDGTIKLWDLRTG-------KPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGH  241 (466)
T ss_pred             EEEecCCCCCceEEEEcCCC-------ceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCC
Confidence            5666664 889999987652       233455669999999999  454 45555899999999988777776 67778


Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee-eEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccccee
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC-MYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~-~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      .... ...|+|++..+++++.|+.+++|+.+.... +..+..|...+.++.|+|  ..+++++.|+.+.+||..+.....
T Consensus       242 ~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  320 (466)
T COG2319         242 SDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLS  320 (466)
T ss_pred             Ccce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEE
Confidence            7775 448999988888999999999999986654 444467788999999998  577778888889999988776554


Q ss_pred             ee
Q psy16373        161 TI  162 (166)
Q Consensus       161 ~~  162 (166)
                      ..
T Consensus       321 ~~  322 (466)
T COG2319         321 SL  322 (466)
T ss_pred             Ee
Confidence            43

>KOG2110|consensus

Probab=99.41  E-value=1.7e-10  Score=78.96  Aligned_cols=120  Identities=18%  Similarity=0.295  Sum_probs=98.7

Q ss_pred             CCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCC---CCceEEEEEcCCCCEEEEe--cCCCcEEEEeCcCCee
Q psy16373         44 HQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGH---CGPITTLFIDGVSMMSGSG--SQDGLLCVWDTVTGAC  118 (166)
Q Consensus        44 ~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~--~~d~~v~~~d~~~~~~  118 (166)
                      ..+|.++.++-+.|+.+=.+ .+.|||+++.++++++..-   ...+.++.+++.+.+++--  ...|.|.+||..+-++
T Consensus        87 pt~IL~VrmNr~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~  165 (391)
T KOG2110|consen   87 PTSILAVRMNRKRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQP  165 (391)
T ss_pred             CCceEEEEEccceEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEccccee
Confidence            45788888877777776655 4999999999999988743   3346667777766777643  3468999999999999


Q ss_pred             eEEeecccccEEEEEEcC--CeEEEeecCCc-EEEEECCcccceeeeee
Q psy16373        119 MYSIQAHDGCIHALTYSD--SYVISLGQDER-LCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       119 ~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~-i~~wd~~~~~~~~~~~~  164 (166)
                      +..+.+|++++.+++|++  ..|+|++..|+ ||++.+.+|+.+++|+-
T Consensus       166 v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRR  214 (391)
T KOG2110|consen  166 VNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRR  214 (391)
T ss_pred             eeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeC
Confidence            999999999999999998  49999999887 79999999999988863

>KOG1007|consensus

Probab=99.41  E-value=1.4e-11  Score=81.98  Aligned_cols=137  Identities=18%  Similarity=0.194  Sum_probs=103.0

Q ss_pred             EecCCCceEEEeecccccceeeceeeeeee-eccCCceEEEEecC---cEEEEEecCCeEEEEEcccc-cceehhcCCCC
Q psy16373         11 RTGSAGSLLDFKKMQVEEEMTLTCCKVEST-RAHHQPITVLECVS---NRVITGSQDHTLKVYKLEDQ-QLLFTLHGHCG   85 (166)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~---~~l~~~~~d~~v~v~~~~~~-~~~~~~~~~~~   85 (166)
                      +....|+.+.+|+......       ...+ ..|.-.|..+.|++   .+|++|+.||.|++||.+.. .+++++.+|.-
T Consensus       187 v~tt~d~tl~~~D~RT~~~-------~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsH  259 (370)
T KOG1007|consen  187 VATTSDSTLQFWDLRTMKK-------NNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSH  259 (370)
T ss_pred             EEEeCCCcEEEEEccchhh-------hcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCce
Confidence            3444556677777664331       1122 36777899999933   46999999999999999864 67888999999


Q ss_pred             ceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCe-----------------------------eeEEeecccccEEEEEEc
Q psy16373         86 PITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGA-----------------------------CMYSIQAHDGCIHALTYS  135 (166)
Q Consensus        86 ~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~-----------------------------~~~~~~~~~~~v~~i~~~  135 (166)
                      -|.++.|+|. .+++++++.|..|.+|...+-.                             .+.++..|+..|.+++|+
T Consensus       260 WvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWS  339 (370)
T KOG1007|consen  260 WVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWS  339 (370)
T ss_pred             EEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeec
Confidence            9999999998 6788899999999999542111                             134566789999999998


Q ss_pred             C---CeEEEeecCCcEEEEECC
Q psy16373        136 D---SYVISLGQDERLCVWDRF  154 (166)
Q Consensus       136 ~---~~l~~~~~d~~i~~wd~~  154 (166)
                      .   =.+++-+.||.+.|=.+.
T Consensus       340 sadPWiFASLSYDGRviIs~V~  361 (370)
T KOG1007|consen  340 SADPWIFASLSYDGRVIISSVP  361 (370)
T ss_pred             cCCCeeEEEeccCceEEeecCC
Confidence            6   378888999999876553

>KOG2106|consensus

Probab=99.41  E-value=3.9e-11  Score=85.13  Aligned_cols=139  Identities=14%  Similarity=0.186  Sum_probs=107.2

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      .+..++|++.|+.+.+|+....   ..      + +--.+++.|+.| ....++.|...|...+.|.++...+..-.. .
T Consensus       379 s~~q~~T~gqdk~v~lW~~~k~---~w------t-~~~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~~lv~~~~d-~  447 (626)
T KOG2106|consen  379 SKNQLLTCGQDKHVRLWNDHKL---EW------T-KIIEDPAECADFHPSGVVAVGTATGRWFVLDTETQDLVTIHTD-N  447 (626)
T ss_pred             ChhheeeccCcceEEEccCCce---eE------E-EEecCceeEeeccCcceEEEeeccceEEEEecccceeEEEEec-C
Confidence            4567899999999999992211   11      1 122457889999 333999999999999999998665554444 8


Q ss_pred             CceEEEEEcCCCCEEEEecCCCcEEEEeCcC-CeeeEEe-ecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373         85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVT-GACMYSI-QAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~-~~~~~~~-~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~  155 (166)
                      .+++++.|+|+|.++|.|+.|+.|++|-+.. +..+... +.+.++|+.+.|++  +++.+-+.|-.|..|....
T Consensus       448 ~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~  522 (626)
T KOG2106|consen  448 EQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKPSE  522 (626)
T ss_pred             CceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEcccc
Confidence            8999999999999999999999999998864 3433333 23448999999998  4889999999999995443

>KOG4227|consensus

Probab=99.40  E-value=7.4e-12  Score=86.56  Aligned_cols=119  Identities=17%  Similarity=0.199  Sum_probs=101.0

Q ss_pred             eeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc------cceehhc-CCCCceEEEEEcCCCCEEEEecCCCcEE
Q psy16373         39 STRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ------QLLFTLH-GHCGPITTLFIDGVSMMSGSGSQDGLLC  109 (166)
Q Consensus        39 ~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~------~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~v~  109 (166)
                      .+.+|.+.|+++.|  ++.+|++|+.|..+++|++...      +++.... .|.+.|.|++|......+.+|..+++|.
T Consensus        51 D~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI  130 (609)
T KOG4227|consen   51 DVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVI  130 (609)
T ss_pred             hhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeE
Confidence            34689999999999  8889999999999999999743      3443333 3668999999999999999999999999


Q ss_pred             EEeCcCCeeeEEeec--ccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373        110 VWDTVTGACMYSIQA--HDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       110 ~~d~~~~~~~~~~~~--~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      ..|+++.+.+..+..  ..+.|..+..+|  +.+++.+.++.|.+||.+...
T Consensus       131 ~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~  182 (609)
T KOG4227|consen  131 KHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQ  182 (609)
T ss_pred             eeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCC
Confidence            999999988887653  245899999998  699999999999999998765

>KOG2111|consensus

Probab=99.40  E-value=8e-11  Score=79.15  Aligned_cols=113  Identities=12%  Similarity=0.210  Sum_probs=92.0

Q ss_pred             CceEEEEe--cCcEEEE-EecCCeEEEEEcccccc--eehhcCCCCceEEEEEcCCCCEEEEecCCC-cEEEEeCcCCee
Q psy16373         45 QPITVLEC--VSNRVIT-GSQDHTLKVYKLEDQQL--LFTLHGHCGPITTLFIDGVSMMSGSGSQDG-LLCVWDTVTGAC  118 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~-~~~d~~v~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~-~v~~~d~~~~~~  118 (166)
                      ....+++.  +..+|+. |-.-|.|.+-|+...+.  ...+.+|.+.|.|++.+.+|..+||++..| .|++||..++.+
T Consensus       137 kGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~  216 (346)
T KOG2111|consen  137 KGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTL  216 (346)
T ss_pred             CceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcE
Confidence            34666666  3444544 44569999999987665  367789999999999999999999999999 478999999999


Q ss_pred             eEEeec--ccccEEEEEEcCC--eEEEeecCCcEEEEECCccc
Q psy16373        119 MYSIQA--HDGCIHALTYSDS--YVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       119 ~~~~~~--~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~  157 (166)
                      +..++-  ....|.+++|+|+  +|++++..|++.++.++...
T Consensus       217 l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~  259 (346)
T KOG2111|consen  217 LQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTE  259 (346)
T ss_pred             eeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeecCC
Confidence            999864  3458999999994  89999999999999987643

>KOG1517|consensus

Probab=99.40  E-value=1.7e-11  Score=93.64  Aligned_cols=147  Identities=23%  Similarity=0.245  Sum_probs=105.8

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeee-eccCCceEEEEe---cCcEEEEEecCCeEEEEEccccc---cee
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVEST-RAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQ---LLF   78 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~---~~~   78 (166)
                      .+.++++|. -..|++|+...+..       ...+ .+....|+++..   .++.+++|..||.|++||.+...   .+.
T Consensus      1177 ~G~Ll~tGd-~r~IRIWDa~~E~~-------~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~ 1248 (1387)
T KOG1517|consen 1177 SGHLLVTGD-VRSIRIWDAHKEQV-------VADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVC 1248 (1387)
T ss_pred             CCeEEecCC-eeEEEEEeccccee-------EeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccce
Confidence            455555554 77899999865431       1111 134556777777   68999999999999999998643   455


Q ss_pred             hhcCCCCc--eEEEEEcCCCC-EEEEecCCCcEEEEeCcCCeee--EEeeccc--c-cEEEEEEcC--CeEEEeecCCcE
Q psy16373         79 TLHGHCGP--ITTLFIDGVSM-MSGSGSQDGLLCVWDTVTGACM--YSIQAHD--G-CIHALTYSD--SYVISLGQDERL  148 (166)
Q Consensus        79 ~~~~~~~~--v~~~~~~~~~~-~~~~~~~d~~v~~~d~~~~~~~--~~~~~~~--~-~v~~i~~~~--~~l~~~~~d~~i  148 (166)
                      ..+.|...  |..+.+.+.|- .+++|+.||.|.+||+|.....  .....|.  + ..+++..++  +.+++|+. +.|
T Consensus      1249 ~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~i 1327 (1387)
T KOG1517|consen 1249 VYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLI 1327 (1387)
T ss_pred             eecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceE
Confidence            66778776  99999988754 4999999999999999975322  2233332  3 589999988  68888887 999


Q ss_pred             EEEECCcccceeee
Q psy16373        149 CVWDRFQGHLLSTI  162 (166)
Q Consensus       149 ~~wd~~~~~~~~~~  162 (166)
                      +||++. |+.+..+
T Consensus      1328 kIy~~~-G~~l~~~ 1340 (1387)
T KOG1517|consen 1328 KIYSLS-GEQLNII 1340 (1387)
T ss_pred             EEEecC-hhhhccc
Confidence            999984 5555444

>KOG1310|consensus

Probab=99.40  E-value=2.2e-12  Score=92.30  Aligned_cols=143  Identities=19%  Similarity=0.166  Sum_probs=110.3

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeee-eccCCceEEEEe----cCcEEEEEecCCeEEEEEccc------
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVEST-RAHHQPITVLEC----VSNRVITGSQDHTLKVYKLED------   73 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~----~~~~l~~~~~d~~v~v~~~~~------   73 (166)
                      ..+-++++|++|-.+.+|+.-..       ++++.+ .+|...|.++.|    ++..+++|..|..|+++|+..      
T Consensus        60 ~dG~lL~SGSDD~r~ivWd~~~~-------KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~  132 (758)
T KOG1310|consen   60 ADGELLASGSDDTRLIVWDPFEY-------KLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGM  132 (758)
T ss_pred             CCCCEEeecCCcceEEeecchhc-------ceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEeccccccccc
Confidence            35778999999999999997532       233333 489999999999    677899999999999999984      


Q ss_pred             ----ccceehhcCCCCceEEEEEcCCC-CEEEEecCCCcEEEEeCcCCe-eeEEe---------ecccccEEEEEEcC--
Q psy16373         74 ----QQLLFTLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGA-CMYSI---------QAHDGCIHALTYSD--  136 (166)
Q Consensus        74 ----~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~-~~~~~---------~~~~~~v~~i~~~~--  136 (166)
                          .+..+.+..|...|..++..|.+ ..+.++++||+++-+|++... +....         ...--...++..+|  
T Consensus       133 d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lielk~ltisp~r  212 (758)
T KOG1310|consen  133 DHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIELKCLTISPSR  212 (758)
T ss_pred             ccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhheeeeeeecCCC
Confidence                23455667899999999999986 889999999999999998531 11111         11112455777777  


Q ss_pred             -CeEEEeecCCcEEEEECC
Q psy16373        137 -SYVISLGQDERLCVWDRF  154 (166)
Q Consensus       137 -~~l~~~~~d~~i~~wd~~  154 (166)
                       .+|+.|+.|-..++||.+
T Consensus       213 p~~laVGgsdpfarLYD~R  231 (758)
T KOG1310|consen  213 PYYLAVGGSDPFARLYDRR  231 (758)
T ss_pred             CceEEecCCCchhhhhhhh
Confidence             489999999999999954

>KOG0650|consensus

Probab=99.39  E-value=5.4e-12  Score=91.01  Aligned_cols=126  Identities=12%  Similarity=0.201  Sum_probs=88.2

Q ss_pred             eeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc--------------------------------
Q psy16373         36 KVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH--------------------------------   81 (166)
Q Consensus        36 ~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~--------------------------------   81 (166)
                      ....+.+|++.|.+++.  .|..|++|+.||+|++|.+.+++++..+.                                
T Consensus       392 ~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp  471 (733)
T KOG0650|consen  392 CALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNP  471 (733)
T ss_pred             eeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCc
Confidence            34456799999999999  89999999999999999999877765542                                


Q ss_pred             -----------------------------------------------CCCCceEEEEEcCCCCEEEEecCC---CcEEEE
Q psy16373         82 -----------------------------------------------GHCGPITTLFIDGVSMMSGSGSQD---GLLCVW  111 (166)
Q Consensus        82 -----------------------------------------------~~~~~v~~~~~~~~~~~~~~~~~d---~~v~~~  111 (166)
                                                                     .|...|..+.||..|.++++..-+   ..|.|.
T Consensus       472 ~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliH  551 (733)
T KOG0650|consen  472 IFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIH  551 (733)
T ss_pred             cccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEE
Confidence                                                           123344555666666666554332   345555


Q ss_pred             eCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeee
Q psy16373        112 DTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       112 d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      ++...+....|+...+.|.++.|+|  .+++.++. ..|++||+..+..++++
T Consensus       552 QLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL  603 (733)
T KOG0650|consen  552 QLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKL  603 (733)
T ss_pred             ecccccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHH
Confidence            5554444445555567889999999  46666664 68999999876655443

>KOG2055|consensus

Probab=99.39  E-value=2.6e-11  Score=85.01  Aligned_cols=139  Identities=13%  Similarity=0.223  Sum_probs=108.1

Q ss_pred             EEEecCCCceEEEeecccccceeeceeeeeeeeccC-CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCC
Q psy16373          9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHH-QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG   85 (166)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~   85 (166)
                      .+++++.....+.|++...+..     ++....++. ..+....+  ++++|+..+..|.|.+....+++.+..++ -.+
T Consensus       272 ~i~~s~rrky~ysyDle~ak~~-----k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG  345 (514)
T KOG2055|consen  272 VIFTSGRRKYLYSYDLETAKVT-----KLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEG  345 (514)
T ss_pred             EEEecccceEEEEeeccccccc-----cccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-ecc
Confidence            7788888888888998654422     222233333 23334444  88899999999999999999999988877 567


Q ss_pred             ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccE--EEEEE--cCCeEEEeecCCcEEEEECC
Q psy16373         86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCI--HALTY--SDSYVISLGQDERLCVWDRF  154 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v--~~i~~--~~~~l~~~~~d~~i~~wd~~  154 (166)
                      .|..++|+.++..++.++.+|.|.+||++...++..+... +.|  ++++.  ++.++++|+..|.|.|||..
T Consensus       346 ~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~-G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~  417 (514)
T KOG2055|consen  346 VVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDD-GSVHGTSLCISLNGSYLATGSDSGIVNIYDGN  417 (514)
T ss_pred             EEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeec-CccceeeeeecCCCceEEeccCcceEEEeccc
Confidence            8999999999999999999999999999999999988753 333  33443  34799999999999999964

>KOG1524|consensus

Probab=99.36  E-value=1.6e-11  Score=87.83  Aligned_cols=142  Identities=15%  Similarity=0.152  Sum_probs=104.4

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c-CcEEEEEecCCeEEEEEcccccceehh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V-SNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~-~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      ++.+.-+++.+.||.+++|.....-.        .++.....+|.|++|  + ++.+++.+  +.+.+=-+.-+..+-..
T Consensus       113 ~~dGtgLlt~GEDG~iKiWSrsGMLR--------Stl~Q~~~~v~c~~W~p~S~~vl~c~g--~h~~IKpL~~n~k~i~W  182 (737)
T KOG1524|consen  113 SPDGAGLLTAGEDGVIKIWSRSGMLR--------STVVQNEESIRCARWAPNSNSIVFCQG--GHISIKPLAANSKIIRW  182 (737)
T ss_pred             CCCCceeeeecCCceEEEEeccchHH--------HHHhhcCceeEEEEECCCCCceEEecC--CeEEEeecccccceeEE
Confidence            45678899999999999999654321        122345568999999  3 34444443  56666666656556667


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcc
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQG  156 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~  156 (166)
                      ++|.+-|.++.|++..+.+++|++|-..++||. .|..+..-..|+.+|++++|+|+.++..+.-+++++=..+.|
T Consensus       183 kAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf~S~~~ey~ITSva~npd~~~~v~S~nt~R~~~p~~G  257 (737)
T KOG1524|consen  183 RAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLFTSAAEEYAITSVAFNPEKDYLLWSYNTARFSSPRVG  257 (737)
T ss_pred             eccCcEEEEeecCccccceeecCCceeEEeecc-cCcccccCChhccceeeeeeccccceeeeeeeeeeecCCCcc
Confidence            889999999999999999999999999999996 577777777888999999999965444444455554444433

>KOG1587|consensus

Probab=99.36  E-value=2.6e-11  Score=89.10  Aligned_cols=149  Identities=11%  Similarity=0.116  Sum_probs=110.7

Q ss_pred             ceEEEEecCCCceEEEeeccc-ccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcc-cccceehh
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQV-EEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLE-DQQLLFTL   80 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~-~~~~~~~~   80 (166)
                      .+++|+.|...|.+.--.... ........+....+..|.++|.++.+   ....+++++ |-+|++|.-. ...++..+
T Consensus       359 ~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~  437 (555)
T KOG1587|consen  359 DPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSL  437 (555)
T ss_pred             CCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhh
Confidence            466788888888876522222 11111222334455678999999999   344555555 9999999998 77888888


Q ss_pred             cCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCC--eeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373         81 HGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTG--ACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~--~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~  155 (166)
                      ..+...+++++|+|. ...|+++..||.+.+||+...  .++.+...+....+.+.|++  ..+++|...|.+.+|++..
T Consensus       438 ~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  438 DSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             hhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence            888888999999998 577888889999999999744  56666655556667788887  4788888899999999853

>KOG0974|consensus

Probab=99.35  E-value=4.1e-11  Score=90.89  Aligned_cols=101  Identities=20%  Similarity=0.257  Sum_probs=90.1

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE-EeecccccEEE
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY-SIQAHDGCIHA  131 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~-~~~~~~~~v~~  131 (166)
                      +.-++++|+..+.+.+|+....+.-..+.+|.+.|..+.++.+|.++++.++|+++++|++.+.+... ..-+|...|+.
T Consensus       144 ~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~  223 (967)
T KOG0974|consen  144 EELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWA  223 (967)
T ss_pred             cEEEEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEE
Confidence            45578999999999999998544444688999999999999999999999999999999999887766 66789999999


Q ss_pred             EEEcCCeEEEeecCCcEEEEEC
Q psy16373        132 LTYSDSYVISLGQDERLCVWDR  153 (166)
Q Consensus       132 i~~~~~~l~~~~~d~~i~~wd~  153 (166)
                      +.|.|+.++|++.|.+.++|+.
T Consensus       224 ~~~~~n~i~t~gedctcrvW~~  245 (967)
T KOG0974|consen  224 CCFLPNRIITVGEDCTCRVWGV  245 (967)
T ss_pred             EEeccceeEEeccceEEEEEec
Confidence            9999999999999999999964

>KOG1524|consensus

Probab=99.34  E-value=2.3e-11  Score=86.99  Aligned_cols=119  Identities=23%  Similarity=0.245  Sum_probs=97.7

Q ss_pred             eeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC
Q psy16373         39 STRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG  116 (166)
Q Consensus        39 ~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~  116 (166)
                      ....|.+.+.|-.|  +|.-|+++++||.|++|.-. |....++-....+|.|++|.|+.+.++-+. .+.+.+=.+...
T Consensus        99 sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrs-GMLRStl~Q~~~~v~c~~W~p~S~~vl~c~-g~h~~IKpL~~n  176 (737)
T KOG1524|consen   99 SISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRS-GMLRSTVVQNEESIRCARWAPNSNSIVFCQ-GGHISIKPLAAN  176 (737)
T ss_pred             hhhhhhhhhhhcccCCCCceeeeecCCceEEEEecc-chHHHHHhhcCceeEEEEECCCCCceEEec-CCeEEEeecccc
Confidence            45689999999999  88899999999999999864 555555555778899999999977666553 456666667766


Q ss_pred             eeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccccee
Q psy16373        117 ACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus       117 ~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      ..+-.+++|.+-|.++.|++  +.+++|++|-..++||. .|+.++
T Consensus       177 ~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf  221 (737)
T KOG1524|consen  177 SKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLF  221 (737)
T ss_pred             cceeEEeccCcEEEEeecCccccceeecCCceeEEeecc-cCcccc
Confidence            77778999999999999998  79999999999999996 355443

>KOG0650|consensus

Probab=99.32  E-value=1.9e-11  Score=88.25  Aligned_cols=111  Identities=17%  Similarity=0.270  Sum_probs=93.3

Q ss_pred             eccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc-cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc---
Q psy16373         41 RAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ-QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV---  114 (166)
Q Consensus        41 ~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~---  114 (166)
                      ......|..++.  .|+.|+.|+.|+.+..+|+.-. ++.+++..|...+.++++|+...++++|+.||++.++.-.   
T Consensus       604 ~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~  683 (733)
T KOG0650|consen  604 LTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYN  683 (733)
T ss_pred             hcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeeh
Confidence            334456778888  7899999999999999999754 7788899999999999999999999999999999998422   


Q ss_pred             ---CC---eeeEEeeccccc----EEEEEEcC--CeEEEeecCCcEEEE
Q psy16373        115 ---TG---ACMYSIQAHDGC----IHALTYSD--SYVISLGQDERLCVW  151 (166)
Q Consensus       115 ---~~---~~~~~~~~~~~~----v~~i~~~~--~~l~~~~~d~~i~~w  151 (166)
                         ..   -++..+++|...    |....|+|  .+|++++.||+|++|
T Consensus       684 Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  684 DLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF  732 (733)
T ss_pred             hhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence               22   345667888664    88899999  599999999999998

>KOG4547|consensus

Probab=99.31  E-value=2.4e-10  Score=82.20  Aligned_cols=145  Identities=13%  Similarity=0.103  Sum_probs=116.3

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      +....+++-|-..+.+..+.....+-     .....-.+|.++|+++.+  .-..|.+++.|..+..|+..+....+..+
T Consensus        67 s~~t~~lvlgt~~g~v~~ys~~~g~i-----t~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~  141 (541)
T KOG4547|consen   67 SLDTSMLVLGTPQGSVLLYSVAGGEI-----TAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWK  141 (541)
T ss_pred             cCCceEEEeecCCccEEEEEecCCeE-----EEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeec
Confidence            34456778888888887777654331     111122478999999998  56679999999999999999999999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-------C-eEEEeecCCcEEEEEC
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-------S-YVISLGQDERLCVWDR  153 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-------~-~l~~~~~d~~i~~wd~  153 (166)
                      +....+.+++++|++..+++++  +.|++||+++.+.+..|.+|.++|.++.|-.       . +|.+...+..+.+|-+
T Consensus       142 ~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v  219 (541)
T KOG4547|consen  142 EQKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVV  219 (541)
T ss_pred             cCCCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEE
Confidence            8899999999999999998774  7899999999999999999999999999953       2 4444555777888876


Q ss_pred             Cc
Q psy16373        154 FQ  155 (166)
Q Consensus       154 ~~  155 (166)
                      ..
T Consensus       220 ~~  221 (541)
T KOG4547|consen  220 EK  221 (541)
T ss_pred             Ec
Confidence            55

>KOG1963|consensus

Probab=99.31  E-value=2.7e-10  Score=85.17  Aligned_cols=157  Identities=13%  Similarity=0.164  Sum_probs=121.6

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      ++.+..+++|..+|.+.+|...........+   ..+.-|..+|++++|  +|.+|++|+..+.+.+|.+++++ .+-+.
T Consensus       214 spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~---t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLP  289 (792)
T KOG1963|consen  214 SPNERYLAAGDSDGRILVWRDFGSSDDSETC---TLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLP  289 (792)
T ss_pred             ccccceEEEeccCCcEEEEeccccccccccc---eEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-ccccc
Confidence            5567788999999999988875532222222   244578899999999  99999999999999999999988 33344


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec-----------ccccEEEEEEcC--CeEEEeecCCcE
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA-----------HDGCIHALTYSD--SYVISLGQDERL  148 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~-----------~~~~v~~i~~~~--~~l~~~~~d~~i  148 (166)
                      .-.++|..+.++|++...+....|..|.+....+.....++++           ..+-.+.+.++|  +.++-.+..+.|
T Consensus       290 RLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~v  369 (792)
T KOG1963|consen  290 RLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHV  369 (792)
T ss_pred             ccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceE
Confidence            4678899999999999999999999999987755443333322           133456778887  688888999999


Q ss_pred             EEEECCcccceeeeee
Q psy16373        149 CVWDRFQGHLLSTIQL  164 (166)
Q Consensus       149 ~~wd~~~~~~~~~~~~  164 (166)
                      .+||+-+.+.+.+++.
T Consensus       370 Q~ydl~td~~i~~~~v  385 (792)
T KOG1963|consen  370 QFYDLYTDSTIYKLQV  385 (792)
T ss_pred             EEEeccccceeeeEEE
Confidence            9999999888877764

>KOG0280|consensus

Probab=99.29  E-value=4.7e-10  Score=74.89  Aligned_cols=117  Identities=16%  Similarity=0.192  Sum_probs=91.6

Q ss_pred             EEEEe--cCcEEEEEecCCeEEEEEcccc--cceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCc-CCeeeEE
Q psy16373         48 TVLEC--VSNRVITGSQDHTLKVYKLEDQ--QLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTV-TGACMYS  121 (166)
Q Consensus        48 ~~~~~--~~~~l~~~~~d~~v~v~~~~~~--~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~-~~~~~~~  121 (166)
                      .++.|  .+..++++..+|.+.+-+....  +.++..+.|.-++....|+.. .+.+.+|++|+.+..||+| .++.+..
T Consensus       125 lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~  204 (339)
T KOG0280|consen  125 LSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWH  204 (339)
T ss_pred             eEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeee
Confidence            35555  6677888888999986665554  334578889999999988654 6789999999999999999 3344443


Q ss_pred             -eecccccEEEEEEcCC---eEEEeecCCcEEEEECC-cccceeeeee
Q psy16373        122 -IQAHDGCIHALTYSDS---YVISLGQDERLCVWDRF-QGHLLSTIQL  164 (166)
Q Consensus       122 -~~~~~~~v~~i~~~~~---~l~~~~~d~~i~~wd~~-~~~~~~~~~~  164 (166)
                       .+.|...|.+|.-+|.   +++||+.|..|++||.| .++++..-..
T Consensus       205 n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v  252 (339)
T KOG0280|consen  205 NSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKV  252 (339)
T ss_pred             cceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCcc
Confidence             4568889999998874   99999999999999999 4777765443

>KOG0280|consensus

Probab=99.28  E-value=9.8e-11  Score=78.06  Aligned_cols=122  Identities=16%  Similarity=0.227  Sum_probs=93.9

Q ss_pred             eeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcc-cccceeh-hcCCCCceEEEEEcCC-CCEEEEecCCCcE
Q psy16373         35 CKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLE-DQQLLFT-LHGHCGPITTLFIDGV-SMMSGSGSQDGLL  108 (166)
Q Consensus        35 ~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~-~~~~~~~-~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v  108 (166)
                      +..++.++|..+++-..|   +++.+++|+.|+.+.-||++ .++.+.. .+-|...|.++.-+|. +.++++|+.|..+
T Consensus       156 e~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i  235 (339)
T KOG0280|consen  156 EKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECI  235 (339)
T ss_pred             eecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccce
Confidence            445577899999999988   78899999999999999998 3444433 4568888999988765 8899999999999


Q ss_pred             EEEeCcC-CeeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCccc
Q psy16373        109 CVWDTVT-GACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       109 ~~~d~~~-~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      ++||.|+ ++++..-. -.+.|+.+.++|   +.++.++.-+-.++-+...+.
T Consensus       236 ~~~DtRnm~kPl~~~~-v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~  287 (339)
T KOG0280|consen  236 RVLDTRNMGKPLFKAK-VGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKV  287 (339)
T ss_pred             eeeehhcccCccccCc-cccceEEEEecchhhhHHHHHHHhcCceEEEecccc
Confidence            9999994 56665543 357899999998   345555555556676665543

>KOG2695|consensus

Probab=99.27  E-value=2.2e-11  Score=82.81  Aligned_cols=149  Identities=20%  Similarity=0.242  Sum_probs=107.1

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc-----ccee
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ-----QLLF   78 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~-----~~~~   78 (166)
                      ..+++++|.+-++..........         ..+ .....|.++.|  .+++++.|+.+|.|...|++..     .+..
T Consensus       224 ~gyhfs~G~sqqv~L~nvetg~~---------qsf-~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~  293 (425)
T KOG2695|consen  224 MGYHFSVGLSQQVLLTNVETGHQ---------QSF-QSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQ  293 (425)
T ss_pred             ceeeecccccceeEEEEeecccc---------ccc-ccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceE
Confidence            45566666655554443322111         111 23456778888  6899999999999999999865     2333


Q ss_pred             hhcCCCCceEEEEEcC-CCCEEEEecCCCcEEEEeCcCCee---eEEeecccccEEEEEE--cC--CeEEEeecCCcEEE
Q psy16373         79 TLHGHCGPITTLFIDG-VSMMSGSGSQDGLLCVWDTVTGAC---MYSIQAHDGCIHALTY--SD--SYVISLGQDERLCV  150 (166)
Q Consensus        79 ~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~~~---~~~~~~~~~~v~~i~~--~~--~~l~~~~~d~~i~~  150 (166)
                      .+. |.+.|+++..-. ++..+.+.+-+|.|++||+|--++   +.++.+|-..-.-+-+  ++  ..+++++.|...++
T Consensus       294 rly-h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRi  372 (425)
T KOG2695|consen  294 RLY-HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRI  372 (425)
T ss_pred             EEE-cCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEE
Confidence            333 888999988766 578888889999999999986665   7888888654333333  23  58999999999999


Q ss_pred             EECCcccceeeeeec
Q psy16373        151 WDRFQGHLLSTIQLQ  165 (166)
Q Consensus       151 wd~~~~~~~~~~~~~  165 (166)
                      |.++.|+.+.+++.+
T Consensus       373 Wsl~~ghLl~tipf~  387 (425)
T KOG2695|consen  373 WSLDSGHLLCTIPFP  387 (425)
T ss_pred             EecccCceeeccCCC
Confidence            999999999887653

>KOG2321|consensus

Probab=99.26  E-value=1.7e-10  Score=83.21  Aligned_cols=127  Identities=17%  Similarity=0.302  Sum_probs=97.7

Q ss_pred             eeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc------CCC-----CceEEEEEcCCCCEEEEe
Q psy16373         36 KVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH------GHC-----GPITTLFIDGVSMMSGSG  102 (166)
Q Consensus        36 ~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~------~~~-----~~v~~~~~~~~~~~~~~~  102 (166)
                      .+.++.-..+.++++..  ...+|++|+.+|.|..||.+.......+.      .|.     ..|+++.|+.+|-.++.|
T Consensus       167 fL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVG  246 (703)
T KOG2321|consen  167 FLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVG  246 (703)
T ss_pred             cccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEee
Confidence            34455556678999998  56778888889999999998765544432      222     248999999999999999


Q ss_pred             cCCCcEEEEeCcCCeeeEEee-cccccEEEEEEcC----CeEEEeecCCcEEEEECCcccceeeee
Q psy16373        103 SQDGLLCVWDTVTGACMYSIQ-AHDGCIHALTYSD----SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       103 ~~d~~v~~~d~~~~~~~~~~~-~~~~~v~~i~~~~----~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      ..+|.+.+||+++.+++..-. +...+|..+.|.+    +.+++. ....+++||-.+|+....++
T Consensus       247 ts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiE  311 (703)
T KOG2321|consen  247 TSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIE  311 (703)
T ss_pred             ccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEec-chHHhhhcccccCCceeecc
Confidence            999999999999998876543 2345889999976    345544 45679999999999877664

>KOG1523|consensus

Probab=99.26  E-value=3.2e-10  Score=76.45  Aligned_cols=113  Identities=15%  Similarity=0.097  Sum_probs=97.2

Q ss_pred             cCCceEEEEe--cCcEEEEEecCCeEEEEEcccc---cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC--
Q psy16373         43 HHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ---QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT--  115 (166)
Q Consensus        43 ~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~--  115 (166)
                      -..+|+|.+|  +...++.+.+...|.||.....   +..++++.|...|+.++|.|..+.+++|+.|...++|....  
T Consensus         9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~   88 (361)
T KOG1523|consen    9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGG   88 (361)
T ss_pred             ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCC
Confidence            3568999999  7788999999999999998765   46788889999999999999999999999999999998843  


Q ss_pred             -CeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373        116 -GACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       116 -~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~  155 (166)
                       .++...+..+....+++.|+|  +.+++++..+.|.+|-...
T Consensus        89 ~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~  131 (361)
T KOG1523|consen   89 TWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQ  131 (361)
T ss_pred             eeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEec
Confidence             355556666788999999999  6999999999999987653

>KOG1409|consensus

Probab=99.23  E-value=2.1e-10  Score=78.06  Aligned_cols=82  Identities=20%  Similarity=0.386  Sum_probs=69.5

Q ss_pred             eeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccc-ceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEE
Q psy16373         34 CCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ-LLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCV  110 (166)
Q Consensus        34 ~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~  110 (166)
                      +..+.++.+|.+++.+++|  .+..|++|..|..+.+||+.-.+ ...++.+|...|..++..+.-..+.+++.||.|.+
T Consensus       187 ~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~  266 (404)
T KOG1409|consen  187 CQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVV  266 (404)
T ss_pred             CceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEE
Confidence            3456677899999999999  56789999999999999997553 34567789999999998888889999999999999


Q ss_pred             EeCcC
Q psy16373        111 WDTVT  115 (166)
Q Consensus       111 ~d~~~  115 (166)
                      ||++.
T Consensus       267 w~mn~  271 (404)
T KOG1409|consen  267 WNMNV  271 (404)
T ss_pred             Eeccc
Confidence            98853

>KOG2111|consensus

Probab=99.23  E-value=6.9e-09  Score=70.05  Aligned_cols=78  Identities=22%  Similarity=0.249  Sum_probs=69.4

Q ss_pred             eeeeccCCceEEEEe--cCcEEEEEecCCe-EEEEEcccccceehhcC--CCCceEEEEEcCCCCEEEEecCCCcEEEEe
Q psy16373         38 ESTRAHHQPITVLEC--VSNRVITGSQDHT-LKVYKLEDQQLLFTLHG--HCGPITTLFIDGVSMMSGSGSQDGLLCVWD  112 (166)
Q Consensus        38 ~~~~~~~~~i~~~~~--~~~~l~~~~~d~~-v~v~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d  112 (166)
                      ..+++|...|.|++.  .|..++++|..|+ |++||.++++.+.+++.  ....|.+++|+|+..+++.+++.|++.++.
T Consensus       175 ~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~  254 (346)
T KOG2111|consen  175 SIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFS  254 (346)
T ss_pred             eEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEE
Confidence            456799999999999  8999999999887 46999999999998874  346799999999999999999999999998


Q ss_pred             CcC
Q psy16373        113 TVT  115 (166)
Q Consensus       113 ~~~  115 (166)
                      ++.
T Consensus       255 l~~  257 (346)
T KOG2111|consen  255 LRD  257 (346)
T ss_pred             eec
Confidence            764

>KOG1538|consensus

Probab=99.22  E-value=3.4e-11  Score=88.31  Aligned_cols=68  Identities=24%  Similarity=0.307  Sum_probs=61.5

Q ss_pred             ceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373         46 PITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~  114 (166)
                      .|..++|  +|..|+.+. +..+.+||...|..++++++|++.|.+++|+.+|..+++|+.|..|.+|+.+
T Consensus        14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~k   83 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSK   83 (1081)
T ss_pred             chheeEECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEeccc
Confidence            6888999  777777654 4689999999999999999999999999999999999999999999999854

>KOG0322|consensus

Probab=99.22  E-value=6.3e-11  Score=77.96  Aligned_cols=68  Identities=16%  Similarity=0.279  Sum_probs=63.4

Q ss_pred             ceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeC
Q psy16373         46 PITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT  113 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~  113 (166)
                      .|..+..  ++..+++++-|+.++||..++..++..++-|.+.|++++|+|+...++.++.|+.|.+|++
T Consensus       253 Gv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  253 GVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             CccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            4555555  8999999999999999999999999999999999999999999999999999999999986

>KOG2139|consensus

Probab=99.19  E-value=2.2e-09  Score=73.74  Aligned_cols=137  Identities=15%  Similarity=0.254  Sum_probs=97.6

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc----cc----
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ----QL----   76 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~----~~----   76 (166)
                      +-++.+..|..+++++.........+       ......|.|++|   ....|+.|+.. -|.+|.....    +.    
T Consensus       111 ~~fava~nddvVriy~ksst~pt~Lk-------s~sQrnvtclawRPlsaselavgCr~-gIciW~~s~tln~~r~~~~~  182 (445)
T KOG2139|consen  111 IAFAVATNDDVVRIYDKSSTCPTKLK-------SVSQRNVTCLAWRPLSASELAVGCRA-GICIWSDSRTLNANRNIRMM  182 (445)
T ss_pred             hhhhhhccCcEEEEeccCCCCCceec-------chhhcceeEEEeccCCcceeeeeecc-eeEEEEcCcccccccccccc
Confidence            45677888888888876543211111       123457999999   56678887764 5889987532    11    


Q ss_pred             ------eehhcCCCCceEEEEEcCCCCEEEEecC-CCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCc
Q psy16373         77 ------LFTLHGHCGPITTLFIDGVSMMSGSGSQ-DGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDER  147 (166)
Q Consensus        77 ------~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~  147 (166)
                            +....+| .+|++++|+++|..+++++. |..+.+||..++..+.-.....+.++-+.|+|  ++++.++.|+.
T Consensus       183 s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~dav  261 (445)
T KOG2139|consen  183 STHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAV  261 (445)
T ss_pred             cccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccce
Confidence                  1112234 67999999999999998875 56899999998866554433356788999999  59999999999


Q ss_pred             EEEEEC
Q psy16373        148 LCVWDR  153 (166)
Q Consensus       148 i~~wd~  153 (166)
                      .++|+.
T Consensus       262 frlw~e  267 (445)
T KOG2139|consen  262 FRLWQE  267 (445)
T ss_pred             eeeehh
Confidence            999954

>KOG1240|consensus

Probab=99.18  E-value=1.4e-09  Score=84.40  Aligned_cols=132  Identities=16%  Similarity=0.202  Sum_probs=98.2

Q ss_pred             eeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc-------cceehhcCCCCceEEEEEcCCCCEEEEec
Q psy16373         34 CCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ-------QLLFTLHGHCGPITTLFIDGVSMMSGSGS  103 (166)
Q Consensus        34 ~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~  103 (166)
                      ...+..+..|...+..++.   ++.++++||.||+|++|+.++-       +...++......+.++...+.+..+|.++
T Consensus      1038 G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t 1117 (1431)
T KOG1240|consen 1038 GILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVST 1117 (1431)
T ss_pred             ceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEc
Confidence            3456667788888888888   4579999999999999999753       12223333467788888889999999999


Q ss_pred             CCCcEEEEeCcC--Cee----------------eEEe-------------------------------------eccccc
Q psy16373        104 QDGLLCVWDTVT--GAC----------------MYSI-------------------------------------QAHDGC  128 (166)
Q Consensus       104 ~d~~v~~~d~~~--~~~----------------~~~~-------------------------------------~~~~~~  128 (166)
                      .||.|.+.++..  .+.                +-.+                                     ....+.
T Consensus      1118 ~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~ 1197 (1431)
T KOG1240|consen 1118 KDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGL 1197 (1431)
T ss_pred             CCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccc
Confidence            999999997753  110                0000                                     012457


Q ss_pred             EEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        129 IHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       129 v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      |++++.+|  ++++.|+..|.+.+||+|-+.++.++..+
T Consensus      1198 vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P 1236 (1431)
T KOG1240|consen 1198 VTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHP 1236 (1431)
T ss_pred             eeEEEecCCceEEEEecCCceEEEEEeecCceeecccCc
Confidence            88888888  69999999999999999988887766543

>KOG1538|consensus

Probab=99.17  E-value=2.2e-09  Score=79.09  Aligned_cols=140  Identities=12%  Similarity=0.183  Sum_probs=98.1

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccccee-----
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF-----   78 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~-----   78 (166)
                      .+..++.+..+.+. +++.+..       ...+++++|.+.|.|++|  +|..+++|+.|..|.+|+.+-...++     
T Consensus        23 DGsqL~lAAg~rll-iyD~ndG-------~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D   94 (1081)
T KOG1538|consen   23 DGTQLILAAGSRLL-VYDTSDG-------TLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHND   94 (1081)
T ss_pred             CCceEEEecCCEEE-EEeCCCc-------ccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCC
Confidence            44455555555444 4444333       245688999999999999  99999999999999999875211100     


Q ss_pred             ---h---------------------------hcCC--CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee---
Q psy16373         79 ---T---------------------------LHGH--CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ---  123 (166)
Q Consensus        79 ---~---------------------------~~~~--~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~---  123 (166)
                         .                           ...|  ...+.+.+|..+|.+++.|-.+|+|.+-+- ++++...++   
T Consensus        95 ~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~I~Rpg  173 (1081)
T KOG1538|consen   95 AIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVKIERPG  173 (1081)
T ss_pred             eeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceEEeCCC
Confidence               0                           0111  234677788889999999999999998874 444333333   


Q ss_pred             cccccEEEEEEcC-------CeEEEeecCCcEEEEECC
Q psy16373        124 AHDGCIHALTYSD-------SYVISLGQDERLCVWDRF  154 (166)
Q Consensus       124 ~~~~~v~~i~~~~-------~~l~~~~~d~~i~~wd~~  154 (166)
                      +..++|++++|+|       +.++...-..++.+|.+.
T Consensus       174 g~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls  211 (1081)
T KOG1538|consen  174 GSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS  211 (1081)
T ss_pred             CCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec
Confidence            3567999999987       378888888888888764

>KOG4714|consensus

Probab=99.17  E-value=1.3e-10  Score=76.40  Aligned_cols=144  Identities=16%  Similarity=0.258  Sum_probs=90.6

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeee-ccCCceEEEEe--cCcEEEEEe-----cCCeEEEEEcccccc
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR-AHHQPITVLEC--VSNRVITGS-----QDHTLKVYKLEDQQL   76 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~--~~~~l~~~~-----~d~~v~v~~~~~~~~   76 (166)
                      ...+.++++..|+.+.....+......      ...+ .|.+. .+.+.  .++.+.++.     .-+..+.|+++..+.
T Consensus        99 ~~~t~V~~~~~dg~~~v~s~~~~~~~~------~~i~~~~~~~-as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t  171 (319)
T KOG4714|consen   99 MTDNRVCIGYADGSLAVFSTDKDLALM------SRIPSIHSGS-ASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKT  171 (319)
T ss_pred             ccCCceEecCCCceEEEEechHHHhhh------hhcccccccc-cccceeecccEEecCCcceEeeccceeeeccccccc
Confidence            456678888888887776654422110      0111 11111 11222  344443332     223445555554332


Q ss_pred             eehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCe-eeEEeecccccEEEEEEcC---CeEEEeecCCcEEEE
Q psy16373         77 LFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGA-CMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVW  151 (166)
Q Consensus        77 ~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~-~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~w  151 (166)
                      +..-+.....|++++-+|. ...+++|+.||.+.+||.++.. +...+..|+.+++.+-|+|   +.|+++++||.+-.|
T Consensus       172 ~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~w  251 (319)
T KOG4714|consen  172 LIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHW  251 (319)
T ss_pred             ccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEE
Confidence            2211222334899999997 5667778899999999999874 3445688999999999998   599999999999999


Q ss_pred             ECCc
Q psy16373        152 DRFQ  155 (166)
Q Consensus       152 d~~~  155 (166)
                      |..+
T Consensus       252 das~  255 (319)
T KOG4714|consen  252 DAST  255 (319)
T ss_pred             cCCC
Confidence            9763

>KOG4190|consensus

Probab=99.16  E-value=3.9e-10  Score=81.53  Aligned_cols=154  Identities=12%  Similarity=0.117  Sum_probs=113.9

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC--
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG--   82 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~--   82 (166)
                      .+-|++++.|+.+++|....+.+...+.....++..|+.+|.++-|  +...++  +.|+.+.+||.--++++.+...  
T Consensus       747 ENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~--ScD~giHlWDPFigr~Laq~~dap  824 (1034)
T KOG4190|consen  747 ENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIA--SCDGGIHLWDPFIGRLLAQMEDAP  824 (1034)
T ss_pred             ccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceee--eccCcceeecccccchhHhhhcCc
Confidence            4568999999999999998777666666677788899999999999  444554  4589999999988887765431  


Q ss_pred             CCCceEEEEEcC--CCC-EEEEecCCCcEEEEeCcCCeeeEEeecc-----cccEEEEEEcC--CeEEEeecCCcEEEEE
Q psy16373         83 HCGPITTLFIDG--VSM-MSGSGSQDGLLCVWDTVTGACMYSIQAH-----DGCIHALTYSD--SYVISLGQDERLCVWD  152 (166)
Q Consensus        83 ~~~~v~~~~~~~--~~~-~~~~~~~d~~v~~~d~~~~~~~~~~~~~-----~~~v~~i~~~~--~~l~~~~~d~~i~~wd  152 (166)
                      ..+.+..+..-+  +.. .++.|+...+++++|.+..+....++..     .+-+.+++..+  ++++.+-..|.|.+.|
T Consensus       825 k~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LD  904 (1034)
T KOG4190|consen  825 KEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILD  904 (1034)
T ss_pred             ccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEe
Confidence            122333332222  223 3444577889999999998877776543     34566777776  6899998999999999


Q ss_pred             CCcccceeee
Q psy16373        153 RFQGHLLSTI  162 (166)
Q Consensus       153 ~~~~~~~~~~  162 (166)
                      .++|+.+.++
T Consensus       905 aR~G~vINsw  914 (1034)
T KOG4190|consen  905 ARNGKVINSW  914 (1034)
T ss_pred             cCCCceeccC
Confidence            9999977644

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.15  E-value=6.3e-09  Score=67.72  Aligned_cols=97  Identities=15%  Similarity=0.234  Sum_probs=69.3

Q ss_pred             eEEEEEccc-ccceehhcC-CCCceEEEEEcCCCCEEEEe--cCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--Ce
Q psy16373         65 TLKVYKLED-QQLLFTLHG-HCGPITTLFIDGVSMMSGSG--SQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SY  138 (166)
Q Consensus        65 ~v~v~~~~~-~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~--~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~  138 (166)
                      ...+|.++. ......+.- ..++|.+++|+|+++.++..  ..+..+.+||++ ++++..+.  ...++.+.|+|  .+
T Consensus        38 ~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~  114 (194)
T PF08662_consen   38 EFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRF  114 (194)
T ss_pred             eEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCE
Confidence            445555532 233333332 34579999999999887554  456799999996 66676664  56778999999  48


Q ss_pred             EEEeecC---CcEEEEECCcccceeeeee
Q psy16373        139 VISLGQD---ERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       139 l~~~~~d---~~i~~wd~~~~~~~~~~~~  164 (166)
                      +++++.+   |.|.+||.++.+.+.+.+.
T Consensus       115 l~~~g~~n~~G~l~~wd~~~~~~i~~~~~  143 (194)
T PF08662_consen  115 LVLAGFGNLNGDLEFWDVRKKKKISTFEH  143 (194)
T ss_pred             EEEEEccCCCcEEEEEECCCCEEeecccc
Confidence            8887654   6699999998888876653

>KOG3881|consensus

Probab=99.14  E-value=6.9e-10  Score=76.52  Aligned_cols=123  Identities=16%  Similarity=0.159  Sum_probs=99.9

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceeh-hcCC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFT-LHGH   83 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~-~~~~   83 (166)
                      .+.|+++..-+.+++|+.....      .++..+.--..+++++..  .++++++|...+.+..+|++.++.... +++.
T Consensus       216 ~~~fat~T~~hqvR~YDt~~qR------RPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~  289 (412)
T KOG3881|consen  216 NYKFATITRYHQVRLYDTRHQR------RPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGI  289 (412)
T ss_pred             CceEEEEecceeEEEecCcccC------cceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCc
Confidence            6789999999999999986443      344445545668888887  899999999999999999999988766 8888


Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD  136 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~  136 (166)
                      .+.|+++..+|...++++++.|+.++|+|+++.+++.... -.+.++.+.+.+
T Consensus       290 tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvY-vKs~lt~il~~~  341 (412)
T KOG3881|consen  290 TGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVY-VKSRLTFILLRD  341 (412)
T ss_pred             cCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhh-hhccccEEEecC
Confidence            9999999999999999999999999999999876665443 244556666644

>KOG4547|consensus

Probab=99.12  E-value=1.2e-08  Score=73.78  Aligned_cols=154  Identities=10%  Similarity=0.042  Sum_probs=119.8

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe----------------------cCcEEEEEecC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC----------------------VSNRVITGSQD   63 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----------------------~~~~l~~~~~d   63 (166)
                      ..-++|....|+.+++|+...+.... ...+...+   ++...+..|                      +...++-|...
T Consensus         4 ~~~~~A~~~~~g~l~iw~t~~~~~~~-e~~p~~~~---s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~   79 (541)
T KOG4547|consen    4 ALDYFALSTGDGRLRIWDTAKNQLQQ-EFAPIASL---SGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQ   79 (541)
T ss_pred             hhheEeecCCCCeEEEEEccCceeee-eeccchhc---cCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCC
Confidence            34578889999999999976543211 11111111   112222222                      22468889999


Q ss_pred             CeEEEEEcccccceehhc--CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eE
Q psy16373         64 HTLKVYKLEDQQLLFTLH--GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YV  139 (166)
Q Consensus        64 ~~v~v~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l  139 (166)
                      |.|.+|++..++....+.  .|.+.|.++.++.+-..+.+++.|+.+..|+......++.+......+.+++.+|+  .+
T Consensus        80 g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l  159 (541)
T KOG4547|consen   80 GSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKIL  159 (541)
T ss_pred             ccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEE
Confidence            999999999998877766  58899999999999889999999999999999999999999988889999999997  77


Q ss_pred             EEeecCCcEEEEECCcccceeeeeec
Q psy16373        140 ISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       140 ~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      ++++  +.|++||+++++.+.+|+.+
T Consensus       160 ~~as--~~ik~~~~~~kevv~~ftgh  183 (541)
T KOG4547|consen  160 LTAS--RQIKVLDIETKEVVITFTGH  183 (541)
T ss_pred             Eecc--ceEEEEEccCceEEEEecCC
Confidence            7765  78999999999999998765

>KOG2139|consensus

Probab=99.11  E-value=9.1e-09  Score=70.77  Aligned_cols=139  Identities=11%  Similarity=0.129  Sum_probs=93.3

Q ss_pred             eEEEEecCCCceEEEeecccccce------eeceeeeeeeeccCCceEEEEe--cCcEEEEEec-CCeEEEEEcccccce
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEM------TLTCCKVESTRAHHQPITVLEC--VSNRVITGSQ-DHTLKVYKLEDQQLL   77 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~-d~~v~v~~~~~~~~~   77 (166)
                      ...++.|...++..|-........      ...+..+...++| .+|+++.|  ++..+++++- |..+.+||..++..+
T Consensus       153 aselavgCr~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~  231 (445)
T KOG2139|consen  153 ASELAVGCRAGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKI  231 (445)
T ss_pred             cceeeeeecceeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcc
Confidence            446788888887765443221111      1112223333455 78999999  7888888774 689999999988665


Q ss_pred             ehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC---eEEEeecCC
Q psy16373         78 FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS---YVISLGQDE  146 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~---~l~~~~~d~  146 (166)
                      .-.....+.++-+.|+|++.++..+.-|+..++|+..+...........+.|....|+|.   .|++++...
T Consensus       232 pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~sgsp  303 (445)
T KOG2139|consen  232 PLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACSGSP  303 (445)
T ss_pred             cccccCCCceeeEEEcCCCCEEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEcCCc
Confidence            443334567889999999999999999999999965543222222223458999999992   445554443

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.11  E-value=3e-10  Score=54.31  Aligned_cols=39  Identities=31%  Similarity=0.507  Sum_probs=36.2

Q ss_pred             ccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEe
Q psy16373         74 QQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWD  112 (166)
Q Consensus        74 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d  112 (166)
                      ++++..+.+|...|.+++|+|++..+++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            356778899999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG2321|consensus

Probab=99.05  E-value=3.9e-09  Score=76.39  Aligned_cols=106  Identities=18%  Similarity=0.291  Sum_probs=89.2

Q ss_pred             EEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec------ccc--
Q psy16373         56 RVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA------HDG--  127 (166)
Q Consensus        56 ~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~------~~~--  127 (166)
                      -|++++....|+-++++.|+.+..+....+.++++.+++...++++|+.+|.+-.||.+..+.+..+..      |.+  
T Consensus       147 Dly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~  226 (703)
T KOG2321|consen  147 DLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGD  226 (703)
T ss_pred             cEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCcccc
Confidence            355666667888999999999999988889999999999999999999999999999998776665532      222  


Q ss_pred             ---cEEEEEEcCC--eEEEeecCCcEEEEECCcccceee
Q psy16373        128 ---CIHALTYSDS--YVISLGQDERLCVWDRFQGHLLST  161 (166)
Q Consensus       128 ---~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~~~~  161 (166)
                         .|+++.|+.+  .+++|+.+|.+.+||+++.+++..
T Consensus       227 ~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~  265 (703)
T KOG2321|consen  227 AAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLV  265 (703)
T ss_pred             ccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceee
Confidence               4999999984  789999999999999999887653

>KOG0309|consensus

Probab=99.05  E-value=8.1e-10  Score=82.07  Aligned_cols=148  Identities=13%  Similarity=0.192  Sum_probs=112.3

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc-cceehhc
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ-QLLFTLH   81 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~-~~~~~~~   81 (166)
                      +.+.+++.+....+.|.......     ......+-+|...|+.+-|   .+..+++++.|..|..||+++- .+.....
T Consensus        81 ~~~wiVsts~qkaiiwnlA~ss~-----~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~  155 (1081)
T KOG0309|consen   81 KPYWIVSTSNQKAIIWNLAKSSS-----NAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTS  155 (1081)
T ss_pred             CceeEEecCcchhhhhhhhcCCc-----cceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeee
Confidence            46777777777777654443222     1222345689999999999   6778999999999999999875 4444444


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC-eeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCccc
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      ......+.+.|+.....+...+....+++||.+.+ .++..+++|...|+.+.|+.   ..+.+++.|++|++||.....
T Consensus       156 ~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt  235 (1081)
T KOG0309|consen  156 SWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKST  235 (1081)
T ss_pred             cccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccc
Confidence            45566788888776444555567779999999866 67888999999999999986   589999999999999987654


Q ss_pred             c
Q psy16373        158 L  158 (166)
Q Consensus       158 ~  158 (166)
                      .
T Consensus       236 ~  236 (1081)
T KOG0309|consen  236 T  236 (1081)
T ss_pred             c
Confidence            3

>KOG1963|consensus

Probab=99.04  E-value=1.4e-08  Score=76.30  Aligned_cols=119  Identities=18%  Similarity=0.202  Sum_probs=96.0

Q ss_pred             ccCCceEEEEe--cCcEEEEEecCCeEEEEEccc--c--cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC
Q psy16373         42 AHHQPITVLEC--VSNRVITGSQDHTLKVYKLED--Q--QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT  115 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~--~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~  115 (166)
                      .|.-.++|.++  .++++++|..||.|.+|.--.  .  .....+.-|...|.++.|+++|.++.+|+..+.+.+|.+.+
T Consensus       203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T  282 (792)
T KOG1963|consen  203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLET  282 (792)
T ss_pred             hhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecC
Confidence            56666888888  889999999999999997543  2  22345566899999999999999999999999999999999


Q ss_pred             CeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceee
Q psy16373        116 GACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLST  161 (166)
Q Consensus       116 ~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~  161 (166)
                      ++ ..-+.--.++|..+.++|  +.......|+.|.+-...+.....+
T Consensus       283 ~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~t  329 (792)
T KOG1963|consen  283 GK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKST  329 (792)
T ss_pred             CC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhh
Confidence            88 333444578999999998  4777888899999987765544433

>KOG1064|consensus

Probab=99.04  E-value=1.1e-09  Score=87.98  Aligned_cols=146  Identities=18%  Similarity=0.228  Sum_probs=101.3

Q ss_pred             CcccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcc-------
Q psy16373          2 NKSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLE-------   72 (166)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~-------   72 (166)
                      +.-+.....+||+.|+.++.|......+..  +.   ...+. ..|+.+.|  .|+.+..+..||.+.+|.+.       
T Consensus      2215 ~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~--~~---rt~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk~~~s~ 2288 (2439)
T KOG1064|consen 2215 TSHPSDPYYLTGSQDGSVRMFEWGHGQQVV--CF---RTAGN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQASPKPYTSW 2288 (2439)
T ss_pred             cCCCCCceEEecCCCceEEEEeccCCCeEE--Ee---eccCc-chhhhhhhcccCCceeeeccCCceeecccCCcceecc
Confidence            334455678899999999988875443211  11   01122 44555555  55555555556666666543       


Q ss_pred             -----------------------------------cc---cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373         73 -----------------------------------DQ---QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        73 -----------------------------------~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~  114 (166)
                                                         -.   ..+.  .+|.+.++++++.|..+.+++|+.+|.+++||++
T Consensus      2289 qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~r 2366 (2439)
T KOG1064|consen 2289 QCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIR 2366 (2439)
T ss_pred             ccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEecCCcCcEEEeehH
Confidence                                               11   1111  5788899999999999999999999999999999


Q ss_pred             CCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeee
Q psy16373        115 TGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       115 ~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      ..+..+.++.       +. ...++++++..|.|+||++.....+.+++
T Consensus      2367 qrql~h~~~~-------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2367 QRQLRHTFQA-------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred             HHHHHHHhhh-------hh-hhheeeccCcccceEEEEccccchhhcCc
Confidence            8877766654       22 34789999999999999998877776654

>KOG1334|consensus

Probab=99.03  E-value=1.3e-09  Score=77.17  Aligned_cols=127  Identities=18%  Similarity=0.238  Sum_probs=103.4

Q ss_pred             eeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc-CCCCceEEEEEcCC--CCEEEEecCCCcEEEE
Q psy16373         37 VESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH-GHCGPITTLFIDGV--SMMSGSGSQDGLLCVW  111 (166)
Q Consensus        37 ~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~-~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~  111 (166)
                      ...+.+|.+.|+.+.|  .|..|++|+.|..|.+||...+.....+. +|...|..-.|-|.  ...+++++.||.+++=
T Consensus       135 ~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s  214 (559)
T KOG1334|consen  135 QKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVS  214 (559)
T ss_pred             hhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeee
Confidence            3456789999999999  89999999999999999999988877765 68888887778775  5688999999999987


Q ss_pred             eCc-CCee--eEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCcccceeeee
Q psy16373        112 DTV-TGAC--MYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       112 d~~-~~~~--~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      .+- ++..  ...+..|.++|..++..|   ..+++++.|+.+.-.|++.+.+-.++.
T Consensus       215 ~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~  272 (559)
T KOG1334|consen  215 EILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFV  272 (559)
T ss_pred             eeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceee
Confidence            654 3322  344566899999998876   589999999999999999877655443

>KOG1334|consensus

Probab=99.02  E-value=6.5e-10  Score=78.71  Aligned_cols=149  Identities=15%  Similarity=0.221  Sum_probs=109.3

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeee------eccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc-----
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVEST------RAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ-----   74 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~-----   74 (166)
                      +.+++|+.+...++++........... .+.++      ......|+|+++  ++..|+++-+|-.|+++.-.-+     
T Consensus       295 ~~faVgG~dqf~RvYD~R~~~~e~~n~-~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p  373 (559)
T KOG1334|consen  295 NEFAVGGSDQFARVYDQRRIDKEENNG-VLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEP  373 (559)
T ss_pred             cccccCChhhhhhhhcccchhhccccc-hhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCC
Confidence            478889999888888875433221111 11121      233456999999  6667777778888999854322     


Q ss_pred             -------ccee-hhcCCCCc--eEEEEE-cCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEE
Q psy16373         75 -------QLLF-TLHGHCGP--ITTLFI-DGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVIS  141 (166)
Q Consensus        75 -------~~~~-~~~~~~~~--v~~~~~-~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~  141 (166)
                             ..+. .+++|.+.  |..+-| -|...++++|+.-|.|.+|+-.+++.+..+.+....|+|+.-+|  ..|++
T Consensus       374 ~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAs  453 (559)
T KOG1334|consen  374 DPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLAS  453 (559)
T ss_pred             CCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhc
Confidence                   1222 37888754  556554 67789999999999999999999999999988777999999999  69999


Q ss_pred             eecCCcEEEEECCccc
Q psy16373        142 LGQDERLCVWDRFQGH  157 (166)
Q Consensus       142 ~~~d~~i~~wd~~~~~  157 (166)
                      ++-|..|+||...+.+
T Consensus       454 SGid~DVKIWTP~~~e  469 (559)
T KOG1334|consen  454 SGIDHDVKIWTPLTAE  469 (559)
T ss_pred             cCCccceeeecCCccc
Confidence            9999999999875443

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.00  E-value=3.2e-08  Score=70.50  Aligned_cols=110  Identities=16%  Similarity=0.138  Sum_probs=81.1

Q ss_pred             cEE-EEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEE
Q psy16373         55 NRV-ITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALT  133 (166)
Q Consensus        55 ~~l-~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~  133 (166)
                      +++ ++-..++.|.+.|..+.+.+..+......-..+.++|+++++.+++.||.+.++|+.+.+.+.+++... ....++
T Consensus         6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~-~~~~i~   84 (369)
T PF02239_consen    6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGG-NPRGIA   84 (369)
T ss_dssp             GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SS-EEEEEE
T ss_pred             cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCC-CcceEE
Confidence            444 455678999999999999998888655444557899999999999999999999999999999988644 456788


Q ss_pred             EcC--CeEEEee-cCCcEEEEECCcccceeeeeec
Q psy16373        134 YSD--SYVISLG-QDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       134 ~~~--~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      +++  .++++++ .++.+.++|.++.++++.+...
T Consensus        85 ~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~  119 (369)
T PF02239_consen   85 VSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTG  119 (369)
T ss_dssp             E--TTTEEEEEEEETTEEEEEETTT--EEEEEE--
T ss_pred             EcCCCCEEEEEecCCCceeEeccccccceeecccc
Confidence            987  4666665 5899999999999999988653

...

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.99  E-value=2.8e-09  Score=50.82  Aligned_cols=37  Identities=27%  Similarity=0.688  Sum_probs=34.0

Q ss_pred             CeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEE
Q psy16373        116 GACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWD  152 (166)
Q Consensus       116 ~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd  152 (166)
                      ++++..+.+|.++|++++|+|  .++++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            357889999999999999998  5999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1354|consensus

Probab=98.90  E-value=4.5e-08  Score=67.10  Aligned_cols=149  Identities=13%  Similarity=0.123  Sum_probs=102.8

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccC------------CceEEEEe----cCcEEEEEecCCeEE
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHH------------QPITVLEC----VSNRVITGSQDHTLK   67 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~i~~~~~----~~~~l~~~~~d~~v~   67 (166)
                      ...+-+|++|..||.+.++..+......  ......++.|.            ..|+.+.|    +...++...+|.+++
T Consensus        34 ~~~Ge~LatGdkgGRVv~f~r~~~~~~e--y~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstNdktiK  111 (433)
T KOG1354|consen   34 DHYGERLATGDKGGRVVLFEREKLYKGE--YNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTNDKTIK  111 (433)
T ss_pred             ecccceEeecCCCCeEEEeecccccccc--eeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecCCccee
Confidence            3457799999999999887765433211  11222233332            45788888    455688888999999


Q ss_pred             EEEcccccce-----------------------------------ehh-cCCCCceEEEEEcCCCCEEEEecCCCcEEEE
Q psy16373         68 VYKLEDQQLL-----------------------------------FTL-HGHCGPITTLFIDGVSMMSGSGSQDGLLCVW  111 (166)
Q Consensus        68 v~~~~~~~~~-----------------------------------~~~-~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~  111 (166)
                      +|-+......                                   +.+ .+|...|+++.++.++..++++ +|-.|.+|
T Consensus       112 lWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA-DdLRINLW  190 (433)
T KOG1354|consen  112 LWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA-DDLRINLW  190 (433)
T ss_pred             eeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-cceeeeec
Confidence            9988642110                                   011 3578889999999999988875 57789999


Q ss_pred             eCcCC---eeeEEeecc-----cccEEEEEEcC---CeEEEeecCCcEEEEECCc
Q psy16373        112 DTVTG---ACMYSIQAH-----DGCIHALTYSD---SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       112 d~~~~---~~~~~~~~~-----~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~  155 (166)
                      ++.-.   -.+-.++.+     ...|++..|+|   +.++-.+..|+|++.|+|.
T Consensus       191 nlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~  245 (433)
T KOG1354|consen  191 NLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQ  245 (433)
T ss_pred             cccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechh
Confidence            98632   223333333     45789999999   5777777889999999984

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.89  E-value=1.6e-06  Score=61.97  Aligned_cols=147  Identities=14%  Similarity=0.125  Sum_probs=93.4

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      .+...+++-..++.+.+-+....+       .+..+......-..+.+  +++++++++.|+.|.++|+.+.+.+.+++.
T Consensus         4 ~~~l~~V~~~~~~~v~viD~~t~~-------~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~   76 (369)
T PF02239_consen    4 TGNLFYVVERGSGSVAVIDGATNK-------VVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV   76 (369)
T ss_dssp             GGGEEEEEEGGGTEEEEEETTT-S-------EEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-
T ss_pred             CccEEEEEecCCCEEEEEECCCCe-------EEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec
Confidence            344555666666666665654332       23344433333334555  789999999999999999999999888875


Q ss_pred             CCCceEEEEEcCCCCEEEEec-CCCcEEEEeCcCCeeeEEeecc-------cccEEEEEEcC--C-eEEEeecCCcEEEE
Q psy16373         83 HCGPITTLFIDGVSMMSGSGS-QDGLLCVWDTVTGACMYSIQAH-------DGCIHALTYSD--S-YVISLGQDERLCVW  151 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~-~d~~v~~~d~~~~~~~~~~~~~-------~~~v~~i~~~~--~-~l~~~~~d~~i~~w  151 (166)
                      . ....+++++++|++++++. .++.+.++|.++.++++.+...       +..+.++..++  + +++..-..+.|-+-
T Consensus        77 G-~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vV  155 (369)
T PF02239_consen   77 G-GNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVV  155 (369)
T ss_dssp             S-SEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEE
T ss_pred             C-CCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEE
Confidence            3 3468899999999888775 6789999999999998887543       23566776666  3 44444445778777


Q ss_pred             ECCcccce
Q psy16373        152 DRFQGHLL  159 (166)
Q Consensus       152 d~~~~~~~  159 (166)
                      |....+.+
T Consensus       156 dy~d~~~~  163 (369)
T PF02239_consen  156 DYSDPKNL  163 (369)
T ss_dssp             ETTTSSCE
T ss_pred             Eecccccc
Confidence            87765544

...

>PRK01742 tolB translocation protein TolB; Provisional

Probab=98.85  E-value=4.2e-07  Score=66.32  Aligned_cols=112  Identities=14%  Similarity=0.148  Sum_probs=77.3

Q ss_pred             eeccCCceEEEEe--cCcEEEEEecC---CeEEEEEcccccc--eehhcCCCCceEEEEEcCCCCEEEEec-CCCcEEEE
Q psy16373         40 TRAHHQPITVLEC--VSNRVITGSQD---HTLKVYKLEDQQL--LFTLHGHCGPITTLFIDGVSMMSGSGS-QDGLLCVW  111 (166)
Q Consensus        40 ~~~~~~~i~~~~~--~~~~l~~~~~d---~~v~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~v~~~  111 (166)
                      +..+...+.+..|  +++.|+..+.+   ..|.+||+.+++.  +..+.++   ....+|+|+++.++.+. .+|...+|
T Consensus       199 lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~~Iy  275 (429)
T PRK01742        199 VNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPDGSRLAFASSKDGVLNIY  275 (429)
T ss_pred             eccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCCCCEEEEEEecCCcEEEE
Confidence            4466778889999  88888877643   4799999987753  3333333   34689999999887754 67765554


Q ss_pred             --eCcCCeeeEEeecccccEEEEEEcCC--eEE-EeecCCcEEEEECCc
Q psy16373        112 --DTVTGACMYSIQAHDGCIHALTYSDS--YVI-SLGQDERLCVWDRFQ  155 (166)
Q Consensus       112 --d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~-~~~~d~~i~~wd~~~  155 (166)
                        |+.+++ ...+..+...+....|+|+  .|+ ++..++...+|++..
T Consensus       276 ~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~  323 (429)
T PRK01742        276 VMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSA  323 (429)
T ss_pred             EEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEEC
Confidence              665554 3445556667888999994  454 444577888887643

>KOG2066|consensus

Probab=98.84  E-value=1.1e-07  Score=71.42  Aligned_cols=109  Identities=17%  Similarity=0.162  Sum_probs=86.0

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-----CCEEEEecCCCcEEEEeCcCC--eeeEEeecc
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-----SMMSGSGSQDGLLCVWDTVTG--ACMYSIQAH  125 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~~~~~~d~~v~~~d~~~~--~~~~~~~~~  125 (166)
                      +|+++++|+.||+|.+-.+.+.+...++. .+.++.+++++|+     ...+++|+..| +.++.-+--  +.-..+..-
T Consensus        82 ~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~  159 (846)
T KOG2066|consen   82 EGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEG  159 (846)
T ss_pred             CCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecC
Confidence            68999999999999999998877666554 5568999999997     56889999888 766653311  111234555


Q ss_pred             cccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        126 DGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       126 ~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .++|.++.|..++++.++.+| |++||+.+++.+..++.
T Consensus       160 eG~I~~i~W~g~lIAWand~G-v~vyd~~~~~~l~~i~~  197 (846)
T KOG2066|consen  160 EGPIHSIKWRGNLIAWANDDG-VKVYDTPTRQRLTNIPP  197 (846)
T ss_pred             ccceEEEEecCcEEEEecCCC-cEEEeccccceeeccCC
Confidence            789999999999999998776 79999999988877654

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=98.83  E-value=9.4e-07  Score=62.25  Aligned_cols=147  Identities=12%  Similarity=0.111  Sum_probs=87.6

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEec-CCeEEEEEccc--c--cceeh
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQ-DHTLKVYKLED--Q--QLLFT   79 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~-d~~v~v~~~~~--~--~~~~~   79 (166)
                      +..+++...++.+.+|+................... ......+.|  ++++++++.. ++.|.+|++..  +  +.+..
T Consensus       138 ~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~-g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~  216 (330)
T PRK11028        138 RTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVE-GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQT  216 (330)
T ss_pred             CEEEEeeCCCCEEEEEEECCCCcccccCCCceecCC-CCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEE
Confidence            355567777788888887542211100000011111 123456777  7788877776 89999999973  2  22333


Q ss_pred             hcCC------CCceEEEEEcCCCCEEEEecC-CCcEEEEeCcCCeeeEEeecc---cccEEEEEEcC--CeEEEeec-CC
Q psy16373         80 LHGH------CGPITTLFIDGVSMMSGSGSQ-DGLLCVWDTVTGACMYSIQAH---DGCIHALTYSD--SYVISLGQ-DE  146 (166)
Q Consensus        80 ~~~~------~~~v~~~~~~~~~~~~~~~~~-d~~v~~~d~~~~~~~~~~~~~---~~~v~~i~~~~--~~l~~~~~-d~  146 (166)
                      +...      ......+.++|++++++++.. ++.|.+|++........+..+   ......+.++|  .+|+++.. ++
T Consensus       217 ~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~  296 (330)
T PRK11028        217 LDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSH  296 (330)
T ss_pred             EecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCC
Confidence            2211      112336889999998888754 689999998644321222222   12345788887  47776665 89


Q ss_pred             cEEEEECC
Q psy16373        147 RLCVWDRF  154 (166)
Q Consensus       147 ~i~~wd~~  154 (166)
                      .|.+|++.
T Consensus       297 ~v~v~~~~  304 (330)
T PRK11028        297 HISVYEID  304 (330)
T ss_pred             cEEEEEEc
Confidence            99999874

>KOG4714|consensus

Probab=98.82  E-value=5.9e-08  Score=64.18  Aligned_cols=106  Identities=18%  Similarity=0.206  Sum_probs=77.5

Q ss_pred             ceEEEEe---cCcEEEEEecCCeEEEEEccccc-ceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373         46 PITVLEC---VSNRVITGSQDHTLKVYKLEDQQ-LLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMY  120 (166)
Q Consensus        46 ~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~-~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~  120 (166)
                      .|.+++-   ..+.+++|+.||.+.+||.++.. +...++.|+.++..+-|+|. +..+.++++||.+..||..+. .+.
T Consensus       181 ~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~~-~l~  259 (319)
T KOG4714|consen  181 AVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDASTT-FLS  259 (319)
T ss_pred             cchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCCc-eEE
Confidence            3777776   56678899999999999999874 44567789999999999997 788999999999999997532 111


Q ss_pred             ------------------E---e----ecccccEEEEEEcCCeEEEeecCCcEEEEE
Q psy16373        121 ------------------S---I----QAHDGCIHALTYSDSYVISLGQDERLCVWD  152 (166)
Q Consensus       121 ------------------~---~----~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd  152 (166)
                                        .   +    ..-...|+.+....+.+++|+.-+.|++++
T Consensus       260 i~~~~s~~s~WLsgD~v~s~i~i~~ll~~~~~SinsfDV~g~~lVcgtd~eaIyl~~  316 (319)
T KOG4714|consen  260 ISNQASVISSWLSGDPVKSRIEITSLLPSRSLSINSFDVLGPCLVCGTDAEAIYLTR  316 (319)
T ss_pred             ecCccccccccccCCcccceEeeeccccccceeeeeeeccCceEEeccccceEEEec
Confidence                              1   0    001124445555556888888777787764

>KOG1354|consensus

Probab=98.81  E-value=7.5e-08  Score=66.01  Aligned_cols=157  Identities=14%  Similarity=0.188  Sum_probs=101.8

Q ss_pred             eEEEEecCCCceEEEeeccccccee----------------------------eceeeeeee-eccCCceEEEEe--cCc
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMT----------------------------LTCCKVEST-RAHHQPITVLEC--VSN   55 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~-~~~~~~i~~~~~--~~~   55 (166)
                      ...+.....+..+++|+........                            +...+.+.+ .+|+..|+++++  +.+
T Consensus        98 ~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~E  177 (433)
T KOG1354|consen   98 LAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKE  177 (433)
T ss_pred             ccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccc
Confidence            3456677788899999875432211                            000111222 368889999999  455


Q ss_pred             EEEEEecCCeEEEEEccccccee---hhcCC-----CCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCee------eE
Q psy16373         56 RVITGSQDHTLKVYKLEDQQLLF---TLHGH-----CGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGAC------MY  120 (166)
Q Consensus        56 ~l~~~~~d~~v~v~~~~~~~~~~---~~~~~-----~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~------~~  120 (166)
                      .+++ ..|-.|.+|+++-...-.   .++.+     ...|++..|+|. .+.++-.+..|+|++.|+|....      +.
T Consensus       178 t~lS-ADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlf  256 (433)
T KOG1354|consen  178 TFLS-ADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLF  256 (433)
T ss_pred             eEee-ccceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhh
Confidence            5555 568899999987432211   22222     345788899998 77888888999999999985421      11


Q ss_pred             Ee----------ecccccEEEEEEcCC--eEEEeecCCcEEEEEC-Ccccceeeeeec
Q psy16373        121 SI----------QAHDGCIHALTYSDS--YVISLGQDERLCVWDR-FQGHLLSTIQLQ  165 (166)
Q Consensus       121 ~~----------~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~-~~~~~~~~~~~~  165 (166)
                      ..          ..--+.|..+.|+++  ++++-. --+|++||+ ...+++.+++++
T Consensus       257 Eepedp~~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nme~~pv~t~~vh  313 (433)
T KOG1354|consen  257 EEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEAKPVETYPVH  313 (433)
T ss_pred             ccccCCcchhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccccCCcceEEeeh
Confidence            11          111236888999884  555443 368999999 667888888764

>KOG4190|consensus

Probab=98.80  E-value=1.3e-08  Score=73.81  Aligned_cols=128  Identities=16%  Similarity=0.297  Sum_probs=94.5

Q ss_pred             eeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc-------cceehhcCCCCceEEEEEcCCCCEEEEecCC
Q psy16373         35 CKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ-------QLLFTLHGHCGPITTLFIDGVSMMSGSGSQD  105 (166)
Q Consensus        35 ~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d  105 (166)
                      ..+..+.||...|..++.  +.+-+++++.|.+|++|.++..       .+..+++.|+.+|+++.|-.+-++++++  |
T Consensus       726 irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D  803 (1034)
T KOG4190|consen  726 IRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--D  803 (1034)
T ss_pred             eeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--c
Confidence            344556789999998887  6778999999999999999742       3556788999999999998888888754  8


Q ss_pred             CcEEEEeCcCCeeeEEeec--ccccEEEEEEcC----Ce-EEEeecCCcEEEEECCcccceeeeee
Q psy16373        106 GLLCVWDTVTGACMYSIQA--HDGCIHALTYSD----SY-VISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       106 ~~v~~~d~~~~~~~~~~~~--~~~~v~~i~~~~----~~-l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      |-+.+||.--+.++..+..  ..+.+..+..-+    .. ++.|+...+++++|.+.++....+++
T Consensus       804 ~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kV  869 (1034)
T KOG4190|consen  804 GGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKV  869 (1034)
T ss_pred             CcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEe
Confidence            8999999887777664421  123333333333    33 34446789999999999887766653

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=98.79  E-value=2.7e-06  Score=59.94  Aligned_cols=108  Identities=8%  Similarity=0.097  Sum_probs=72.7

Q ss_pred             ceEEEEe--cCcEEEEEec-CCeEEEEEccccc----ceehhcCCCCceEEEEEcCCCCEEEE-ecCCCcEEEEeCcCCe
Q psy16373         46 PITVLEC--VSNRVITGSQ-DHTLKVYKLEDQQ----LLFTLHGHCGPITTLFIDGVSMMSGS-GSQDGLLCVWDTVTGA  117 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~~~~-d~~v~v~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~d~~v~~~d~~~~~  117 (166)
                      ....+.+  +++++++++. ++.|.+|++.+..    .+..+. +......++++|+++++++ ...++.|.+||+.+..
T Consensus        81 ~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g  159 (330)
T PRK11028         81 SPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDG  159 (330)
T ss_pred             CceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCC
Confidence            3456777  6777777764 8999999997432    222222 2345677889999887754 4566899999997632


Q ss_pred             eeE-------EeecccccEEEEEEcCC--eEEEeec-CCcEEEEECCc
Q psy16373        118 CMY-------SIQAHDGCIHALTYSDS--YVISLGQ-DERLCVWDRFQ  155 (166)
Q Consensus       118 ~~~-------~~~~~~~~v~~i~~~~~--~l~~~~~-d~~i~~wd~~~  155 (166)
                      .+.       .... ......++|+|+  +++++.. ++.|.+|++..
T Consensus       160 ~l~~~~~~~~~~~~-g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~  206 (330)
T PRK11028        160 HLVAQEPAEVTTVE-GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKD  206 (330)
T ss_pred             cccccCCCceecCC-CCCCceEEECCCCCEEEEEecCCCEEEEEEEeC
Confidence            221       1111 234567899984  7777766 89999999973

>KOG1275|consensus

Probab=98.79  E-value=1.3e-07  Score=72.13  Aligned_cols=139  Identities=19%  Similarity=0.197  Sum_probs=105.8

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEec---------CCeEEEEEcccccce
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQ---------DHTLKVYKLEDQQLL   77 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~---------d~~v~v~~~~~~~~~   77 (166)
                      ..++.+|...|.+.+.+.+.       +..++++..|++.|..+...|++|++++.         |..|+|||++..+.+
T Consensus       187 nr~lf~G~t~G~V~LrD~~s-------~~~iht~~aHs~siSDfDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral  259 (1118)
T KOG1275|consen  187 NRNLFCGDTRGTVFLRDPNS-------FETIHTFDAHSGSISDFDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRAL  259 (1118)
T ss_pred             CcEEEeecccceEEeecCCc-------CceeeeeeccccceeeeeccCCeEEEeecccccccccccchhhhhhhhhhhcc
Confidence            35677788888887777543       35677899999999999999999999874         677899999988887


Q ss_pred             ehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCC-ee---eEEeecccccEEEEEEcC--CeEEEeecCCcEEE
Q psy16373         78 FTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTG-AC---MYSIQAHDGCIHALTYSD--SYVISLGQDERLCV  150 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~-~~---~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~  150 (166)
                      ..+.-+.++ .-+.|+|. ...++.++..|...+.|..+. .+   +..+......+.++.+++  +.++.+..+|.|.+
T Consensus       260 ~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~  338 (1118)
T KOG1275|consen  260 SPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNL  338 (1118)
T ss_pred             CCcccccCc-hhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEee
Confidence            777655554 66778887 667888899999999994322 22   222233344588888887  69999999999999


Q ss_pred             EEC
Q psy16373        151 WDR  153 (166)
Q Consensus       151 wd~  153 (166)
                      |.-
T Consensus       339 wa~  341 (1118)
T KOG1275|consen  339 WAD  341 (1118)
T ss_pred             ecC
Confidence            973

>PRK01742 tolB translocation protein TolB; Provisional

Probab=98.78  E-value=4.3e-07  Score=66.24  Aligned_cols=118  Identities=12%  Similarity=0.014  Sum_probs=77.0

Q ss_pred             eeccCCceEEEEe--cCcEEEEEe-cCCeEEEEEcccc-cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC
Q psy16373         40 TRAHHQPITVLEC--VSNRVITGS-QDHTLKVYKLEDQ-QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT  115 (166)
Q Consensus        40 ~~~~~~~i~~~~~--~~~~l~~~~-~d~~v~v~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~  115 (166)
                      +..+...+....|  +++.|+..+ .++...+|++... .....+ .+..  ....|+|+++.++..+.++ +.+||+.+
T Consensus       287 lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~  362 (429)
T PRK01742        287 LTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTS  362 (429)
T ss_pred             eccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCC
Confidence            3445556777888  777766554 5788888887532 212222 3333  4578999999998877765 55699988


Q ss_pred             CeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEEC--Ccccceeeee
Q psy16373        116 GACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDR--FQGHLLSTIQ  163 (166)
Q Consensus       116 ~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~--~~~~~~~~~~  163 (166)
                      ++........  ....+.|+|  ..++.++.++...+|++  .+|+.+.++.
T Consensus       363 g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~  412 (429)
T PRK01742        363 GSTEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLP  412 (429)
T ss_pred             CCeEEecCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEcc
Confidence            8654322222  234577898  47888888888888875  3577766664

>KOG1409|consensus

Probab=98.72  E-value=5e-07  Score=62.01  Aligned_cols=82  Identities=29%  Similarity=0.497  Sum_probs=68.5

Q ss_pred             eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe-eeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEEC
Q psy16373         77 LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA-CMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDR  153 (166)
Q Consensus        77 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~-~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~  153 (166)
                      +..+.+|.+.+.+++|.|....+.+|..|..+.+||+--.+ ....+++|...|..+..-+  ..+++++.||.|.+||.
T Consensus       190 i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~m  269 (404)
T KOG1409|consen  190 ITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNM  269 (404)
T ss_pred             EEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEec
Confidence            44567899999999999999999999999999999986443 3456778888888887766  68999999999999998


Q ss_pred             Ccccc
Q psy16373        154 FQGHL  158 (166)
Q Consensus       154 ~~~~~  158 (166)
                      ...+.
T Consensus       270 n~~r~  274 (404)
T KOG1409|consen  270 NVKRV  274 (404)
T ss_pred             cceee
Confidence            76543

>PRK05137 tolB translocation protein TolB; Provisional

Probab=98.72  E-value=3.9e-06  Score=61.42  Aligned_cols=117  Identities=13%  Similarity=0.011  Sum_probs=81.4

Q ss_pred             eeeccCCceEEEEe--cCcEEEEEec---CCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEE-EecCCCc--EEE
Q psy16373         39 STRAHHQPITVLEC--VSNRVITGSQ---DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSG-SGSQDGL--LCV  110 (166)
Q Consensus        39 ~~~~~~~~i~~~~~--~~~~l~~~~~---d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d~~--v~~  110 (166)
                      .+..+...+.+.+|  +++.|+..+.   +..|.+||+.+++.. .+..+.+.+....|+|+++.++ +.+.++.  |.+
T Consensus       196 ~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~  274 (435)
T PRK05137        196 YLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYT  274 (435)
T ss_pred             EEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEEEEEEecCCCceEEE
Confidence            34467778999999  7888877653   468999999887553 3444556677899999998765 5555554  777


Q ss_pred             EeCcCCeeeEEeecccccEEEEEEcCC--eEEEeec-C--CcEEEEECCccc
Q psy16373        111 WDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQ-D--ERLCVWDRFQGH  157 (166)
Q Consensus       111 ~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~-d--~~i~~wd~~~~~  157 (166)
                      ||+.+++. ..+..+........|+|+  .|+..+. +  ..|.++|+..++
T Consensus       275 ~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~  325 (435)
T PRK05137        275 MDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSN  325 (435)
T ss_pred             EECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCC
Confidence            79887754 445555556677899984  5655543 3  368888876554

>KOG3914|consensus

Probab=98.69  E-value=2e-07  Score=64.80  Aligned_cols=83  Identities=19%  Similarity=0.273  Sum_probs=68.4

Q ss_pred             eeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceeh-hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC
Q psy16373         39 STRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFT-LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT  115 (166)
Q Consensus        39 ~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~  115 (166)
                      ..-||...++.+++  ++++|+++..|..|++-....--.+.. +.+|+..|..++.-++ ..+++++.|+++++||+++
T Consensus       146 ~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~s  224 (390)
T KOG3914|consen  146 PILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDITS  224 (390)
T ss_pred             hhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecCCCCcEEEEeccc
Confidence            34589999999999  889999999999999977664444433 3579999999999765 4588999999999999999


Q ss_pred             CeeeEEe
Q psy16373        116 GACMYSI  122 (166)
Q Consensus       116 ~~~~~~~  122 (166)
                      ++.+..+
T Consensus       225 gk~L~t~  231 (390)
T KOG3914|consen  225 GKLLDTC  231 (390)
T ss_pred             CCccccc
Confidence            9887655

>KOG2315|consensus

Probab=98.63  E-value=1.1e-06  Score=63.70  Aligned_cols=113  Identities=18%  Similarity=0.333  Sum_probs=85.4

Q ss_pred             CCceEEEEe--cCcEEEE--EecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC---CcEEEEeCcCC
Q psy16373         44 HQPITVLEC--VSNRVIT--GSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD---GLLCVWDTVTG  116 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~~--~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d---~~v~~~d~~~~  116 (166)
                      .+||.++.|  ++..++.  |-.=..+.++|++ +.++..+  ..++-+++-|+|.|++++.++.+   |.+-+||+.+.
T Consensus       270 ~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~  346 (566)
T KOG2315|consen  270 EGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNR  346 (566)
T ss_pred             CCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccch
Confidence            689999999  5655544  4445788899987 5555444  35677899999999999887654   79999999998


Q ss_pred             eeeEEeecccccEEEEEEcCC--eEEEeec------CCcEEEEECCcccceeee
Q psy16373        117 ACMYSIQAHDGCIHALTYSDS--YVISLGQ------DERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       117 ~~~~~~~~~~~~v~~i~~~~~--~l~~~~~------d~~i~~wd~~~~~~~~~~  162 (166)
                      +++..+...  .-+-..|+|+  +++|++.      |+.++||+. +|..+...
T Consensus       347 K~i~~~~a~--~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy-tG~~l~~~  397 (566)
T KOG2315|consen  347 KLIAKFKAA--NTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY-TGSLLHEK  397 (566)
T ss_pred             hhccccccC--CceEEEEcCCCcEEEEEeccccEEecCCeEEEEe-cCceeehh
Confidence            888888753  3355889994  8888775      788999997 56665543

>PRK02889 tolB translocation protein TolB; Provisional

Probab=98.62  E-value=4.6e-06  Score=60.92  Aligned_cols=111  Identities=10%  Similarity=0.027  Sum_probs=72.4

Q ss_pred             eccCCceEEEEe--cCcEEEEEec---CCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEE-EecCCCcEEEEe--
Q psy16373         41 RAHHQPITVLEC--VSNRVITGSQ---DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSG-SGSQDGLLCVWD--  112 (166)
Q Consensus        41 ~~~~~~i~~~~~--~~~~l~~~~~---d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d~~v~~~d--  112 (166)
                      ..+...+.+.+|  +++.|+..+.   ...|.+||+.+++... +....+.+....|+|+++.++ +.+.++...+|.  
T Consensus       192 ~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d  270 (427)
T PRK02889        192 LSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVN  270 (427)
T ss_pred             ccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCCceEEEEE
Confidence            355667888888  7888877664   2469999998876532 333344567889999998876 567777766664  


Q ss_pred             CcCCeeeEEeecccccEEEEEEcCC--eEEEee-cCCcEEEEEC
Q psy16373        113 TVTGACMYSIQAHDGCIHALTYSDS--YVISLG-QDERLCVWDR  153 (166)
Q Consensus       113 ~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~-~d~~i~~wd~  153 (166)
                      +..+. ...+..+........|+|+  .++..+ .++...+|.+
T Consensus       271 ~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~  313 (427)
T PRK02889        271 ADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRM  313 (427)
T ss_pred             CCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEE
Confidence            44443 4445545555667889984  555444 3455566654

>KOG4532|consensus

Probab=98.60  E-value=1.2e-05  Score=53.85  Aligned_cols=118  Identities=13%  Similarity=0.049  Sum_probs=87.3

Q ss_pred             eEEEEe--cCcEEEEEecCCeEEEEEcccc-cceeh-h-cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE-
Q psy16373         47 ITVLEC--VSNRVITGSQDHTLKVYKLEDQ-QLLFT-L-HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY-  120 (166)
Q Consensus        47 i~~~~~--~~~~l~~~~~d~~v~v~~~~~~-~~~~~-~-~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~-  120 (166)
                      +.++++  ++.++++.+....|..|.+... +.+.. . ....+.-.+..|+.....+|++..||++.+||+|...... 
T Consensus       161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~  240 (344)
T KOG4532|consen  161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMA  240 (344)
T ss_pred             eeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchh
Confidence            566666  7889999999999999988753 22222 1 1233344677888889999999999999999998653222 


Q ss_pred             ----EeecccccEEEEEEcC----CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        121 ----SIQAHDGCIHALTYSD----SYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       121 ----~~~~~~~~v~~i~~~~----~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                          +-..|.+.+..+.|++    +.|+..-.-+.+.+.|+|+++..+.+..
T Consensus       241 ~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i  292 (344)
T KOG4532|consen  241 EISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVI  292 (344)
T ss_pred             hhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEec
Confidence                1234788999999996    5666666668899999999988776643

>KOG4532|consensus

Probab=98.59  E-value=6.5e-06  Score=55.06  Aligned_cols=143  Identities=14%  Similarity=0.129  Sum_probs=91.9

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      ..++.|+..+...+|.....+.....+      ..|...|.-+.-   ....+..++.|.++++.+++-+.....  .|.
T Consensus        85 ~~la~gG~~g~fd~~~~~tn~~h~~~c------d~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~--~h~  156 (344)
T KOG4532|consen   85 VTLADGGASGQFDLFACNTNDGHLYQC------DVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFA--VHN  156 (344)
T ss_pred             cEEEeccccceeeeecccCcccceeee------cccccchhhhhhhcccccceeeccCCcceeEEEEecCcccce--eec
Confidence            457777777888888876444222111      122222221111   334467778899999988875433222  233


Q ss_pred             C--ceEEEEEcCCCCEEEEecCCCcEEEEeCcCC-eeeEE-eec-ccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373         85 G--PITTLFIDGVSMMSGSGSQDGLLCVWDTVTG-ACMYS-IQA-HDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        85 ~--~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~-~~~~~-~~~-~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      .  .+.++.+++++.++++.++...|..|.+... +.+.. ..+ -+..-.+..|+.  ..++++..||++.+||+|...
T Consensus       157 ~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~  236 (344)
T KOG4532|consen  157 QNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMA  236 (344)
T ss_pred             cccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccc
Confidence            3  3788999999999999999999999988644 33322 222 223345667776  489999999999999998754


Q ss_pred             c
Q psy16373        158 L  158 (166)
Q Consensus       158 ~  158 (166)
                      .
T Consensus       237 t  237 (344)
T KOG4532|consen  237 T  237 (344)
T ss_pred             c
Confidence            3

>KOG1064|consensus

Probab=98.58  E-value=2.3e-07  Score=75.26  Aligned_cols=117  Identities=22%  Similarity=0.346  Sum_probs=88.8

Q ss_pred             CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC-CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe----
Q psy16373         45 QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG-HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA----  117 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~----  117 (166)
                      ..|.++.-  ...+.++|+.||.|++|....+..+..++. ....|+.+.|+.+|+.+..+..||.+.+|......    
T Consensus      2209 ~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk~~~s~ 2288 (2439)
T KOG1064|consen 2209 ENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASPKPYTSW 2288 (2439)
T ss_pred             CceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCCcceecc
Confidence            34444444  445788999999999999988877766652 33678888888888888888888888888653110    


Q ss_pred             -----------------------------------------eeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECC
Q psy16373        118 -----------------------------------------CMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRF  154 (166)
Q Consensus       118 -----------------------------------------~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~  154 (166)
                                                               .+.  ..|.+.++++++.|  ..+++|+.+|.|++||++
T Consensus      2289 qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~r 2366 (2439)
T KOG1064|consen 2289 QCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIR 2366 (2439)
T ss_pred             ccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEecCCcCcEEEeehH
Confidence                                                     011  46788899999999  489999999999999999


Q ss_pred             cccceeeee
Q psy16373        155 QGHLLSTIQ  163 (166)
Q Consensus       155 ~~~~~~~~~  163 (166)
                      ..+.++.++
T Consensus      2367 qrql~h~~~ 2375 (2439)
T KOG1064|consen 2367 QRQLRHTFQ 2375 (2439)
T ss_pred             HHHHHHHhh
Confidence            888776654

>KOG0309|consensus

Probab=98.55  E-value=1.4e-07  Score=70.59  Aligned_cols=144  Identities=18%  Similarity=0.261  Sum_probs=105.5

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc-cceehh
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ-QLLFTL   80 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~-~~~~~~   80 (166)
                      ..+..+++++.+..+..|++....      .+......-......++|   +++.+++ +....+.+||.+.+ .++..+
T Consensus       125 q~pdVlatcsvdt~vh~wd~rSp~------~p~ys~~~w~s~asqVkwnyk~p~vlas-shg~~i~vwd~r~gs~pl~s~  197 (1081)
T KOG0309|consen  125 QHPDVLATCSVDTYVHAWDMRSPH------RPFYSTSSWRSAASQVKWNYKDPNVLAS-SHGNDIFVWDLRKGSTPLCSL  197 (1081)
T ss_pred             CCCcceeeccccccceeeeccCCC------cceeeeecccccCceeeecccCcchhhh-ccCCceEEEeccCCCcceEEe
Confidence            356789999999999999987654      233334444445677888   5565655 56678999999876 677888


Q ss_pred             cCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCC-------------------------------------------
Q psy16373         81 HGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTG-------------------------------------------  116 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~-------------------------------------------  116 (166)
                      ++|...|+.++|... ...+.+++.||+|+.||-...                                           
T Consensus       198 K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~  277 (1081)
T KOG0309|consen  198 KGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCE  277 (1081)
T ss_pred             cccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCceeEeccccCCeeeeecccc
Confidence            899999999998765 566778899999999976322                                           


Q ss_pred             ------------eeeEEeecccccEEEEEEcC-----------C-eEEEeecCCcEEEEECCc
Q psy16373        117 ------------ACMYSIQAHDGCIHALTYSD-----------S-YVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       117 ------------~~~~~~~~~~~~v~~i~~~~-----------~-~l~~~~~d~~i~~wd~~~  155 (166)
                                  .++..|.+|...|....|-.           + .|+|=+.|..+++|-+.+
T Consensus       278 n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  278 NSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             chhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence                        12555667777776665521           1 789999999999998753

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.55  E-value=1.6e-05  Score=57.06  Aligned_cols=111  Identities=15%  Similarity=0.174  Sum_probs=76.6

Q ss_pred             EEecCcEEEEEecCCeEEEEEcccccceehhcCCCCceEE-EEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeeccccc
Q psy16373         50 LECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITT-LFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGC  128 (166)
Q Consensus        50 ~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~  128 (166)
                      ...+++.++.++.++.+..+|..+++.+....... .+.+ ..+  .+..++.++.++.+..+|.++++.+..+......
T Consensus       101 p~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~~~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~  177 (377)
T TIGR03300       101 VGADGGLVFVGTEKGEVIALDAEDGKELWRAKLSS-EVLSPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPA  177 (377)
T ss_pred             eEEcCCEEEEEcCCCEEEEEECCCCcEeeeeccCc-eeecCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCc
Confidence            33467888888999999999999998876654322 2221 122  2446666778999999999999988776543222


Q ss_pred             EE-----EEEEcCCeEEEeecCCcEEEEECCcccceeeee
Q psy16373        129 IH-----ALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       129 v~-----~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      ..     ......+.++.+..++.+..+|.++|+.+.+..
T Consensus       178 ~~~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG~~~W~~~  217 (377)
T TIGR03300       178 LTLRGSASPVIADGGVLVGFAGGKLVALDLQTGQPLWEQR  217 (377)
T ss_pred             eeecCCCCCEEECCEEEEECCCCEEEEEEccCCCEeeeec
Confidence            11     112223577888888999999999998776543

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.54  E-value=1e-06  Score=60.04  Aligned_cols=148  Identities=16%  Similarity=0.174  Sum_probs=98.7

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccC------------CceEEEEe----cCcEEEEEecCCeEEE
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHH------------QPITVLEC----VSNRVITGSQDHTLKV   68 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~i~~~~~----~~~~l~~~~~d~~v~v   68 (166)
                      .++.++++|..+|.+.++..+......  .+....+++|.            ..|..+.|    .-+.++..++|.++++
T Consensus        36 ~tg~YlatGDkgGRVvlfer~~s~~ce--ykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLlstNdktiKl  113 (460)
T COG5170          36 ETGLYLATGDKGGRVVLFEREKSYGCE--YKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLSTNDKTIKL  113 (460)
T ss_pred             cccceEeecCCCceEEEeecccccccc--hhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEecCCceeee
Confidence            467899999999999887765433111  12222334443            34778888    2345777789999999


Q ss_pred             EEccccc-------------------ce-----------------------ehh-cCCCCceEEEEEcCCCCEEEEecCC
Q psy16373         69 YKLEDQQ-------------------LL-----------------------FTL-HGHCGPITTLFIDGVSMMSGSGSQD  105 (166)
Q Consensus        69 ~~~~~~~-------------------~~-----------------------~~~-~~~~~~v~~~~~~~~~~~~~~~~~d  105 (166)
                      |-+.+..                   ++                       +.+ ..|...++++.++.+...++++ .|
T Consensus       114 WKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~et~lSa-Dd  192 (460)
T COG5170         114 WKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKETLLSA-DD  192 (460)
T ss_pred             eeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchheeeec-cc
Confidence            9886320                   00                       001 3466778899999988888764 57


Q ss_pred             CcEEEEeCcCC---eeeEEeecc-----cccEEEEEEcC---CeEEEeecCCcEEEEECCc
Q psy16373        106 GLLCVWDTVTG---ACMYSIQAH-----DGCIHALTYSD---SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       106 ~~v~~~d~~~~---~~~~~~~~~-----~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~  155 (166)
                      -.|.+|++.-.   -.+..++.|     ...|++..|+|   +.+.-.+..|.|++-|+|.
T Consensus       193 LrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq  253 (460)
T COG5170         193 LRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQ  253 (460)
T ss_pred             eeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhh
Confidence            78999988633   233344444     34688999998   4555566689999999983

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.54  E-value=2e-05  Score=57.83  Aligned_cols=74  Identities=11%  Similarity=0.090  Sum_probs=60.0

Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCccc
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~  157 (166)
                      .....+.+.+++|+...++.|+.||++.+||...+.....  ...-..+.++|+|+  .+++|+..|.+.+||+.-..
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~--ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALsp  332 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA--KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSP  332 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee--eecccceEEEEcCCCcEEEEEcCCceEEEEEeecCc
Confidence            3567899999999999999999999999999876643322  23446688999994  88888889999999986443

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.53  E-value=4.5e-06  Score=59.93  Aligned_cols=111  Identities=15%  Similarity=0.139  Sum_probs=80.4

Q ss_pred             ecCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEE
Q psy16373         52 CVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHA  131 (166)
Q Consensus        52 ~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~  131 (166)
                      ..++.++.++.++.+..+|..+++.+...............  ++..++.++.++.+..+|.++++.+............
T Consensus        63 v~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~  140 (377)
T TIGR03300        63 VAGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSP  140 (377)
T ss_pred             EECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecC
Confidence            36788889999999999999999887665533322222333  3566777888999999999999988776543222222


Q ss_pred             EEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        132 LTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       132 i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .....+.++.++.++.|..+|.++|+.+.+++.
T Consensus       141 p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~  173 (377)
T TIGR03300       141 PLVANGLVVVRTNDGRLTALDAATGERLWTYSR  173 (377)
T ss_pred             CEEECCEEEEECCCCeEEEEEcCCCceeeEEcc
Confidence            233446788888899999999999998877654

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG2695|consensus

Probab=98.52  E-value=7.2e-07  Score=61.37  Aligned_cols=126  Identities=13%  Similarity=0.180  Sum_probs=84.2

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccc---eehhc
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQL---LFTLH   81 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~---~~~~~   81 (166)
                      +++..|...+.|...+.....+...  ++.+. --|...|+++..   ++.+|.+.+.+|+|.+||++--+.   +.++.
T Consensus       265 nLv~~GcRngeI~~iDLR~rnqG~~--~~a~r-lyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYe  341 (425)
T KOG2695|consen  265 NLVFNGCRNGEIFVIDLRCRNQGNG--WCAQR-LYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYE  341 (425)
T ss_pred             CeeEecccCCcEEEEEeeecccCCC--cceEE-EEcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeee
Confidence            4445555555555445444332222  12222 247788888887   788899999999999999987666   77777


Q ss_pred             CCCCceEEE--EEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc----cccEEEEEEcC
Q psy16373         82 GHCGPITTL--FIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH----DGCIHALTYSD  136 (166)
Q Consensus        82 ~~~~~v~~~--~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~----~~~v~~i~~~~  136 (166)
                      +|-+.-.-+  -+++....++++++|...++|.++.+..+.++...    +..+..++|..
T Consensus       342 GHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s~~e~d~~sv~~~s  402 (425)
T KOG2695|consen  342 GHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYSASEVDIPSVAFDS  402 (425)
T ss_pred             cccccccccccccccccceEEEccCeeEEEEEecccCceeeccCCCCccccccccceehhc
Confidence            876543322  34566778888999999999999999888776432    22456677654

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.49  E-value=1.7e-06  Score=59.05  Aligned_cols=124  Identities=17%  Similarity=0.208  Sum_probs=81.8

Q ss_pred             eccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccc---eehhcCCC-----CceEEEEEcCC-CCEEEEecCCCcEEE
Q psy16373         41 RAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQL---LFTLHGHC-----GPITTLFIDGV-SMMSGSGSQDGLLCV  110 (166)
Q Consensus        41 ~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~---~~~~~~~~-----~~v~~~~~~~~-~~~~~~~~~d~~v~~  110 (166)
                      ..|...|+++++ +....+..+.|-.|.+|+++-...   +..++.|.     ..|++..|+|. .+.+.-.+..|.|++
T Consensus       169 NaH~yhiNSiS~NsD~et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl  248 (460)
T COG5170         169 NAHPYHINSISFNSDKETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKL  248 (460)
T ss_pred             ccceeEeeeeeecCchheeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEe
Confidence            357888999999 444444446688999999864322   22233342     35788899998 566666788999999


Q ss_pred             EeCcCCee------eEEe----------ecccccEEEEEEcCC-eEEEeecCCcEEEEECCcc-cceeeeee
Q psy16373        111 WDTVTGAC------MYSI----------QAHDGCIHALTYSDS-YVISLGQDERLCVWDRFQG-HLLSTIQL  164 (166)
Q Consensus       111 ~d~~~~~~------~~~~----------~~~~~~v~~i~~~~~-~l~~~~~d~~i~~wd~~~~-~~~~~~~~  164 (166)
                      -|+|....      +...          .+-...|..+.|+++ .++.+-.--++++||++.. .+++++++
T Consensus       249 ~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwDvnm~k~pikTi~~  320 (460)
T COG5170         249 NDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWDVNMAKNPIKTIPM  320 (460)
T ss_pred             hhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEecccccCCceeech
Confidence            99984421      1111          122347888999984 3333333468999999874 57777764

>KOG1912|consensus

Probab=98.49  E-value=1.7e-06  Score=65.39  Aligned_cols=117  Identities=14%  Similarity=0.227  Sum_probs=97.9

Q ss_pred             eEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCC------------CEEEEecCCCcEEEEeC
Q psy16373         47 ITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVS------------MMSGSGSQDGLLCVWDT  113 (166)
Q Consensus        47 i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~------------~~~~~~~~d~~v~~~d~  113 (166)
                      -.++.| .+.+|+-|+. ..|.+-|..+.+.++.+..|...|+.+.|.|..            -.++++...|.|.+||.
T Consensus        18 ~~A~Dw~~~GLiAygsh-slV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~   96 (1062)
T KOG1912|consen   18 RNAADWSPSGLIAYGSH-SLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDF   96 (1062)
T ss_pred             ccccccCccceEEEecC-ceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEe
Confidence            456777 6667777664 578899999999999999999999999997641            25677888899999999


Q ss_pred             cCCeeeEEeecccccEEEEEEcC------CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        114 VTGACMYSIQAHDGCIHALTYSD------SYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       114 ~~~~~~~~~~~~~~~v~~i~~~~------~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ..+..+..++.|..++..+.|-+      +.++.......|.+|+..+|+.+.++..
T Consensus        97 ~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~y  153 (1062)
T KOG1912|consen   97 VLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDY  153 (1062)
T ss_pred             hhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeecccc
Confidence            99998888998999999999954      4788888889999999999999887653

>PRK04922 tolB translocation protein TolB; Provisional

Probab=98.47  E-value=9.6e-06  Score=59.36  Aligned_cols=116  Identities=15%  Similarity=0.047  Sum_probs=77.5

Q ss_pred             eeccCCceEEEEe--cCcEEEEEec---CCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEE-EecCCC--cEEEE
Q psy16373         40 TRAHHQPITVLEC--VSNRVITGSQ---DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSG-SGSQDG--LLCVW  111 (166)
Q Consensus        40 ~~~~~~~i~~~~~--~~~~l~~~~~---d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d~--~v~~~  111 (166)
                      +..+...+.+.+|  +++.|+..+.   +..|.+||+.+++... +....+...+..|+|+++.++ +.+.++  .|++|
T Consensus       199 lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~  277 (433)
T PRK04922        199 ILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVM  277 (433)
T ss_pred             eecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCEEEEEEeCCCCceEEEE
Confidence            3455667888888  7888887763   3469999998775432 233344456789999998775 445555  69999


Q ss_pred             eCcCCeeeEEeecccccEEEEEEcCC--eEEEee-cCCc--EEEEECCccc
Q psy16373        112 DTVTGACMYSIQAHDGCIHALTYSDS--YVISLG-QDER--LCVWDRFQGH  157 (166)
Q Consensus       112 d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~-~d~~--i~~wd~~~~~  157 (166)
                      |+.+++. ..+..+........|+|+  .++..+ .++.  |.++|+.+++
T Consensus       278 d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~  327 (433)
T PRK04922        278 DLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGS  327 (433)
T ss_pred             ECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence            9988764 344445555567899983  565554 3444  6777776654

>PRK03629 tolB translocation protein TolB; Provisional

Probab=98.45  E-value=8.4e-05  Score=54.43  Aligned_cols=114  Identities=11%  Similarity=0.012  Sum_probs=74.3

Q ss_pred             ccCCceEEEEe--cCcEEEEEe---cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEe-cCCC--cEEEEeC
Q psy16373         42 AHHQPITVLEC--VSNRVITGS---QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSG-SQDG--LLCVWDT  113 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~~~---~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~d~--~v~~~d~  113 (166)
                      .+...+.+.+|  +++.|+..+   .+..+.+|++.+++... +......+....|+|+++.++.. +.+|  .|++||+
T Consensus       196 ~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~  274 (429)
T PRK03629        196 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDL  274 (429)
T ss_pred             cCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEEC
Confidence            45567888888  788877654   24578999998775432 22223334568999999888754 4444  5889999


Q ss_pred             cCCeeeEEeecccccEEEEEEcCC--eEEEeec-CC--cEEEEECCccc
Q psy16373        114 VTGACMYSIQAHDGCIHALTYSDS--YVISLGQ-DE--RLCVWDRFQGH  157 (166)
Q Consensus       114 ~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~-d~--~i~~wd~~~~~  157 (166)
                      ++++... +..+...+....|+|+  .|+..+. ++  .|..+|+.+++
T Consensus       275 ~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~  322 (429)
T PRK03629        275 ASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGA  322 (429)
T ss_pred             CCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCC
Confidence            8876543 3334456778999984  5655554 34  45555666554

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.43  E-value=3e-05  Score=51.94  Aligned_cols=110  Identities=18%  Similarity=0.161  Sum_probs=78.3

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe-eccc-----
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI-QAHD-----  126 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~-~~~~-----  126 (166)
                      .++.+++++.++.+..||..+++.+.++............  .+..++.+..++.+..+|.++++.+... ....     
T Consensus        35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~--~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~  112 (238)
T PF13360_consen   35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPVV--DGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGV  112 (238)
T ss_dssp             ETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEEE--ETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCST
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccceeee--cccccccccceeeeEecccCCcceeeeecccccccccc
Confidence            7888888899999999999999888766542211111222  2345555667889999999999998874 3221     


Q ss_pred             ccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        127 GCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       127 ~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .......+..+.++.+..++.|..+|+++|+.+.+++.
T Consensus       113 ~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~  150 (238)
T PF13360_consen  113 RSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPV  150 (238)
T ss_dssp             B--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEES
T ss_pred             ccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeec
Confidence            12233445567888888899999999999999888765

...

>PRK04922 tolB translocation protein TolB; Provisional

Probab=98.43  E-value=6.4e-05  Score=55.11  Aligned_cols=112  Identities=18%  Similarity=0.064  Sum_probs=70.7

Q ss_pred             ceEEEEe--cCcEEE-EEecCC--eEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec-CCCc--EEEEeCcCCe
Q psy16373         46 PITVLEC--VSNRVI-TGSQDH--TLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS-QDGL--LCVWDTVTGA  117 (166)
Q Consensus        46 ~i~~~~~--~~~~l~-~~~~d~--~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~--v~~~d~~~~~  117 (166)
                      ...+..|  +++.++ +.+.++  .|.+||+.+++. ..+..+.......+|+|+++.++..+ .++.  +.++|+.+++
T Consensus       249 ~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~  327 (433)
T PRK04922        249 INGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGS  327 (433)
T ss_pred             CccCceECCCCCEEEEEEeCCCCceEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence            3446677  677665 445554  599999987764 34444555557789999999887665 3444  6666776665


Q ss_pred             eeEEeecccccEEEEEEcC--CeEEEeecC---CcEEEEECCcccce
Q psy16373        118 CMYSIQAHDGCIHALTYSD--SYVISLGQD---ERLCVWDRFQGHLL  159 (166)
Q Consensus       118 ~~~~~~~~~~~v~~i~~~~--~~l~~~~~d---~~i~~wd~~~~~~~  159 (166)
                      ... +..+.......+|+|  +.++..+.+   ..|.+||+.+++..
T Consensus       328 ~~~-lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~  373 (433)
T PRK04922        328 AER-LTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR  373 (433)
T ss_pred             eEE-eecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE
Confidence            332 222233344688998  356554433   26999999877643

>KOG1275|consensus

Probab=98.41  E-value=2.3e-06  Score=65.58  Aligned_cols=110  Identities=20%  Similarity=0.196  Sum_probs=88.9

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEE
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHAL  132 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i  132 (166)
                      ++..++.|+....+..+|+.+.+..+...-..+.|.-++.  .++.+.+|...|+|.+-|.++.+.+.++.+|.+.|.++
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDf  223 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDF  223 (1118)
T ss_pred             CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccceeee
Confidence            5667788888888888899887766554433444555554  46888999999999999999999999999999999999


Q ss_pred             EEcCCeEEEeec---------CCcEEEEECCcccceeeeee
Q psy16373        133 TYSDSYVISLGQ---------DERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       133 ~~~~~~l~~~~~---------d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ....+.|++|+.         |..|++||+|+.+.+.-+++
T Consensus       224 Dv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~  264 (1118)
T KOG1275|consen  224 DVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQF  264 (1118)
T ss_pred             eccCCeEEEeecccccccccccchhhhhhhhhhhccCCccc
Confidence            999999999986         56789999999887765554

>PRK02889 tolB translocation protein TolB; Provisional

Probab=98.39  E-value=5e-05  Score=55.58  Aligned_cols=112  Identities=15%  Similarity=0.111  Sum_probs=67.9

Q ss_pred             CceEEEEe--cCcEEE-EEecCCeEEEEEc--ccccceehhcCCCCceEEEEEcCCCCEEEEecC-CCcEEEEeC--cCC
Q psy16373         45 QPITVLEC--VSNRVI-TGSQDHTLKVYKL--EDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQ-DGLLCVWDT--VTG  116 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~-~~~~d~~v~v~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~~v~~~d~--~~~  116 (166)
                      +.+.+..|  +++.|+ +.+.++...+|.+  ..+. ...+..+........|+|+++.++..+. ++...+|.+  .++
T Consensus       240 g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g  318 (427)
T PRK02889        240 GSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGG  318 (427)
T ss_pred             CCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCC
Confidence            34556777  777766 5667777666654  3333 3445545555677889999998775543 455666654  444


Q ss_pred             eeeEEeecccccEEEEEEcC--CeEEEeecCC---cEEEEECCcccc
Q psy16373        117 ACMYSIQAHDGCIHALTYSD--SYVISLGQDE---RLCVWDRFQGHL  158 (166)
Q Consensus       117 ~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~---~i~~wd~~~~~~  158 (166)
                      +.. .+...........|+|  +.++..+.++   .|.+||+.+++.
T Consensus       319 ~~~-~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~  364 (427)
T PRK02889        319 AAQ-RVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQV  364 (427)
T ss_pred             ceE-EEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCe
Confidence            332 2222222334578888  3666555443   699999987754

>KOG1645|consensus

Probab=98.38  E-value=2.1e-06  Score=60.17  Aligned_cols=91  Identities=18%  Similarity=0.087  Sum_probs=75.9

Q ss_pred             EEEEEcccccceehhcCCCCceEEEEEcCCCC-EEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC---CeEEE
Q psy16373         66 LKVYKLEDQQLLFTLHGHCGPITTLFIDGVSM-MSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD---SYVIS  141 (166)
Q Consensus        66 v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~  141 (166)
                      |++.+-.+.+...-+..+...|.+++++|..+ ++..++.+..|++.|+++...+..+..+ ..+++++|+-   ++|+.
T Consensus       175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYa  253 (463)
T KOG1645|consen  175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYA  253 (463)
T ss_pred             eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEE
Confidence            55555555555555566788899999999866 6778899999999999999999998876 7899999975   58999


Q ss_pred             eecCCcEEEEECCccc
Q psy16373        142 LGQDERLCVWDRFQGH  157 (166)
Q Consensus       142 ~~~d~~i~~wd~~~~~  157 (166)
                      |-..|.|.+||++..+
T Consensus       254 Gl~nG~VlvyD~R~~~  269 (463)
T KOG1645|consen  254 GLQNGMVLVYDMRQPE  269 (463)
T ss_pred             eccCceEEEEEccCCC
Confidence            9999999999998754

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.38  E-value=0.00019  Score=48.02  Aligned_cols=107  Identities=18%  Similarity=0.132  Sum_probs=72.9

Q ss_pred             ecCcEEEEEecCCeEEEEEcccccceehhcCCCCc----------eEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373         52 CVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP----------ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS  121 (166)
Q Consensus        52 ~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~  121 (166)
                      +.++.++.+..++.+..+|+++++.+.........          +..-....++ .+..++.++.+..+|+++++.+..
T Consensus       120 ~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~  198 (238)
T PF13360_consen  120 VDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLWS  198 (238)
T ss_dssp             EETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEEE
T ss_pred             EecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEEE
Confidence            36888888888999999999999987766543322          1222222234 555666677544349999987653


Q ss_pred             eecccccEEE-EEEcCCeEEEeecCCcEEEEECCcccceee
Q psy16373        122 IQAHDGCIHA-LTYSDSYVISLGQDERLCVWDRFQGHLLST  161 (166)
Q Consensus       122 ~~~~~~~v~~-i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~  161 (166)
                      ..  ...+.. .....+.++.++.++.|..||+++|+.+.+
T Consensus       199 ~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~d~~tG~~~W~  237 (238)
T PF13360_consen  199 KP--ISGIYSLPSVDGGTLYVTSSDGRLYALDLKTGKVVWQ  237 (238)
T ss_dssp             EC--SS-ECECEECCCTEEEEEETTTEEEEEETTTTEEEEE
T ss_pred             ec--CCCccCCceeeCCEEEEEeCCCEEEEEECCCCCEEeE
Confidence            33  222333 444557888888999999999999998764

...

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.37  E-value=0.00015  Score=52.42  Aligned_cols=116  Identities=12%  Similarity=0.155  Sum_probs=90.2

Q ss_pred             ccCCceEEEEe--cCcEEEEEecCC-eEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee
Q psy16373         42 AHHQPITVLEC--VSNRVITGSQDH-TLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC  118 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~~~~d~-~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~  118 (166)
                      +|...|.-..+  +++-++.|..|| .+-++|.++++.. .+...-+.|.++..+++|..++.+.....+.+.|+.++..
T Consensus       357 ~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~k-r~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv  435 (668)
T COG4946         357 GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVK-RIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNV  435 (668)
T ss_pred             CCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEE-EeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCe
Confidence            55666665555  777889999998 9999999987653 3455667899999999999999999999999999999987


Q ss_pred             eEEeecccccEEEEEEcCC--eEEEeecC----CcEEEEECCcccc
Q psy16373        119 MYSIQAHDGCIHALTYSDS--YVISLGQD----ERLCVWDRFQGHL  158 (166)
Q Consensus       119 ~~~~~~~~~~v~~i~~~~~--~l~~~~~d----~~i~~wd~~~~~~  158 (166)
                      ...-+...+-|+.+.|+|+  +++-+--+    ..|+++|+..++.
T Consensus       436 ~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Ki  481 (668)
T COG4946         436 RLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKI  481 (668)
T ss_pred             eEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeE
Confidence            6554555678999999994  55544333    4689999877654

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.37  E-value=6.5e-06  Score=60.33  Aligned_cols=71  Identities=14%  Similarity=0.132  Sum_probs=57.7

Q ss_pred             ccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373         42 AHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~  114 (166)
                      .....+.|.++  +.+.++.|+.||+|.+||...+....  ....-..+.++|+|+|..+++|+..|.+.+||+.
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~--~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A  329 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLL--AKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA  329 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeee--eeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence            34566778887  77889999999999999997663322  2234457899999999999999999999999985

>KOG1912|consensus

Probab=98.36  E-value=2.7e-05  Score=59.19  Aligned_cols=137  Identities=11%  Similarity=0.083  Sum_probs=101.3

Q ss_pred             EEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c------C------cEEEEEecCCeEEEEEcccc
Q psy16373          9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V------S------NRVITGSQDHTLKVYKLEDQ   74 (166)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~------~------~~l~~~~~d~~v~v~~~~~~   74 (166)
                      +++-|+-..+..++....        +.+..++.|...|+.+.|  .      .      -.|+++...|.|.+||...+
T Consensus        28 LiAygshslV~VVDs~s~--------q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~   99 (1062)
T KOG1912|consen   28 LIAYGSHSLVSVVDSRSL--------QLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLA   99 (1062)
T ss_pred             eEEEecCceEEEEehhhh--------hhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhh
Confidence            455555555555544432        344566778889999999  1      1      14777888899999999999


Q ss_pred             cceehhcCCCCceEEEEEcCC---C-CEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC---CeEEEeecCCc
Q psy16373         75 QLLFTLHGHCGPITTLFIDGV---S-MMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD---SYVISLGQDER  147 (166)
Q Consensus        75 ~~~~~~~~~~~~v~~~~~~~~---~-~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~  147 (166)
                      ..+..+..|..++..++|-+.   . ..++.-....++.+|+..+|+.............++.++|   .++...+..|.
T Consensus       100 s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~  179 (1062)
T KOG1912|consen  100 SVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGF  179 (1062)
T ss_pred             hhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCce
Confidence            888889999999999998543   3 4566666677999999999999988877677788899887   35555566677


Q ss_pred             EEEEEC
Q psy16373        148 LCVWDR  153 (166)
Q Consensus       148 i~~wd~  153 (166)
                      +.+.+.
T Consensus       180 vl~~~~  185 (1062)
T KOG1912|consen  180 VLSCKD  185 (1062)
T ss_pred             EEEEec
Confidence            766654

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.35  E-value=0.00019  Score=52.60  Aligned_cols=117  Identities=12%  Similarity=0.027  Sum_probs=76.4

Q ss_pred             eeccCCceEEEEe--cCcEEEEEecC---CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEE-EecCCC--cEEEE
Q psy16373         40 TRAHHQPITVLEC--VSNRVITGSQD---HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSG-SGSQDG--LLCVW  111 (166)
Q Consensus        40 ~~~~~~~i~~~~~--~~~~l~~~~~d---~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d~--~v~~~  111 (166)
                      +..+...+....|  +++.|+..+.+   ..|.+|++.+++... +....+.+....|+|+++.++ +.+.++  .+.++
T Consensus       194 l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~  272 (430)
T PRK00178        194 LLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVM  272 (430)
T ss_pred             EecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEE
Confidence            3345667888888  78888766533   468899998775432 222334456789999998776 444555  68888


Q ss_pred             eCcCCeeeEEeecccccEEEEEEcCC--eEEEee-cC--CcEEEEECCcccc
Q psy16373        112 DTVTGACMYSIQAHDGCIHALTYSDS--YVISLG-QD--ERLCVWDRFQGHL  158 (166)
Q Consensus       112 d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~-~d--~~i~~wd~~~~~~  158 (166)
                      |+.+++.. .+..+........|+|+  .++..+ .+  ..|.++|+.+++.
T Consensus       273 d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~  323 (430)
T PRK00178        273 DLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRA  323 (430)
T ss_pred             ECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence            99877643 34444555667789883  554444 33  3577778876653

>KOG4497|consensus

Probab=98.34  E-value=5e-06  Score=57.11  Aligned_cols=105  Identities=12%  Similarity=0.043  Sum_probs=70.6

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcE-EEEEecCCeEEEEEcccccceehh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNR-VITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~-l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      |..+..+++.+.-.+ .+.+.+..+-        ..+.-.-..|.-+.|  +..+ |+....++.|.+|++...+-...+
T Consensus        17 Sp~g~yiAs~~~yrl-viRd~~tlq~--------~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckI   87 (447)
T KOG4497|consen   17 SPCGNYIASLSRYRL-VIRDSETLQL--------HQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKI   87 (447)
T ss_pred             CCCCCeeeeeeeeEE-EEeccchhhH--------HHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEe
Confidence            455667777776633 3333322211        111112345667777  4444 555667889999999988888888


Q ss_pred             cCCCCceEEEEEcCCCCEEE-EecCCCcEEEEeCcCCe
Q psy16373         81 HGHCGPITTLFIDGVSMMSG-SGSQDGLLCVWDTVTGA  117 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~-~~~~d~~v~~~d~~~~~  117 (166)
                      .....++..++|+|+|+.++ +...+-.+.+|.+.+.+
T Consensus        88 deg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~  125 (447)
T KOG4497|consen   88 DEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQK  125 (447)
T ss_pred             ccCCCcceeeeECCCcceEeeeecceeEEEEEEeccce
Confidence            88889999999999996554 55668899999886554

>KOG2041|consensus

Probab=98.33  E-value=7.2e-06  Score=61.79  Aligned_cols=146  Identities=10%  Similarity=0.080  Sum_probs=102.5

Q ss_pred             eEEEEecCCCceEEEeeccccccee--------eceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccc
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMT--------LTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQL   76 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~   76 (166)
                      ...++.|+.+|.+++-+........        ....--+++.||.+.|.-+.|  ..+.|-+...+|.|.+|-+-.+..
T Consensus        26 ~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW  105 (1189)
T KOG2041|consen   26 SGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSW  105 (1189)
T ss_pred             CCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCceEEEEeeecccH
Confidence            4567888899988876664322111        111223567899999999999  566788889999999999988866


Q ss_pred             eehhcC--CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeee-EEeecccccEEEEEEcCC--eEEEeecCCcEEEE
Q psy16373         77 LFTLHG--HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACM-YSIQAHDGCIHALTYSDS--YVISLGQDERLCVW  151 (166)
Q Consensus        77 ~~~~~~--~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~-~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~w  151 (166)
                      ..++..  .++.|.+++|+.+|..+...-.||.|.+=.+...+.- ..+++  .-...+.|+++  .++.+-..|.+.+|
T Consensus       106 ~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg--~~l~hv~ws~D~~~~Lf~~ange~hly  183 (1189)
T KOG2041|consen  106 CEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKG--QLLAHVLWSEDLEQALFKKANGETHLY  183 (1189)
T ss_pred             HHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcch--heccceeecccHHHHHhhhcCCcEEEe
Confidence            555443  4567899999999999999999999988766433211 11222  23346888884  55556667888888


Q ss_pred             ECC
Q psy16373        152 DRF  154 (166)
Q Consensus       152 d~~  154 (166)
                      |..
T Consensus       184 dnq  186 (1189)
T KOG2041|consen  184 DNQ  186 (1189)
T ss_pred             ccc
Confidence            853

>KOG0882|consensus

Probab=98.33  E-value=1.3e-06  Score=62.02  Aligned_cols=152  Identities=16%  Similarity=0.164  Sum_probs=109.4

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEec-CCeEEEEEcccccce-------
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQ-DHTLKVYKLEDQQLL-------   77 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~-d~~v~v~~~~~~~~~-------   77 (166)
                      ..+.+++-|+.+++|.......    ...+..+..|...|.+++.  ++-++.+.+. |..++++|+++...+       
T Consensus        21 ~fiiqASlDGh~KFWkKs~isG----vEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~   96 (558)
T KOG0882|consen   21 KFIIQASLDGHKKFWKKSRISG----VEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVD   96 (558)
T ss_pred             heEEeeecchhhhhcCCCCccc----eeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhccccc
Confidence            3567899999999998654221    2233345678888887777  7777888777 999999988732111       


Q ss_pred             ----------------------------------------e-hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC-
Q psy16373         78 ----------------------------------------F-TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT-  115 (166)
Q Consensus        78 ----------------------------------------~-~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~-  115 (166)
                                                              . .-.-|..+|.++.+.+.+..+++....|.|.-|.... 
T Consensus        97 lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~  176 (558)
T KOG0882|consen   97 LPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGP  176 (558)
T ss_pred             CCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCc
Confidence                                                    0 0123778899999999999999999999999998762 


Q ss_pred             -----CeeeEEe---------ecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373        116 -----GACMYSI---------QAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       116 -----~~~~~~~---------~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                           .+....+         ...+....++.|+|  ..+.+-+.|..|++++.++|+.++.+.
T Consensus       177 ~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiD  240 (558)
T KOG0882|consen  177 FQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEID  240 (558)
T ss_pred             ccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhh
Confidence                 1111111         12244567889998  478888899999999999999887664

>KOG4497|consensus

Probab=98.31  E-value=7.3e-06  Score=56.35  Aligned_cols=113  Identities=17%  Similarity=0.152  Sum_probs=88.9

Q ss_pred             CCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEE-ecCCCcEEEEeCcCCeeeEEe
Q psy16373         44 HQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGS-GSQDGLLCVWDTVTGACMYSI  122 (166)
Q Consensus        44 ~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~d~~v~~~d~~~~~~~~~~  122 (166)
                      .++..+++.+|+++++.+.- .+.+-|..+-+..+.+.. -..|.-+.|..+..+++. ...++.|.+|++...+....+
T Consensus        10 ~~~~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~c-ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckI   87 (447)
T KOG4497|consen   10 LNPFCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLC-LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKI   87 (447)
T ss_pred             cCCceeECCCCCeeeeeeee-EEEEeccchhhHHHHHHH-HHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEe
Confidence            34455666699999998865 888888888776655543 456777888887665554 467889999999999999999


Q ss_pred             ecccccEEEEEEcCC---eEEEeecCCcEEEEECCcccc
Q psy16373        123 QAHDGCIHALTYSDS---YVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus       123 ~~~~~~v~~i~~~~~---~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      .....++..+.|+|+   .+.+...|-.|.+|.+.+.+.
T Consensus        88 deg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~  126 (447)
T KOG4497|consen   88 DEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKG  126 (447)
T ss_pred             ccCCCcceeeeECCCcceEeeeecceeEEEEEEecccee
Confidence            888889999999994   677777899999999977553

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.31  E-value=0.00019  Score=52.19  Aligned_cols=113  Identities=16%  Similarity=0.104  Sum_probs=72.4

Q ss_pred             cCCceEEEEe--cCcEEE-EEecC--CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecC-CC--cEEEEeCc
Q psy16373         43 HHQPITVLEC--VSNRVI-TGSQD--HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQ-DG--LLCVWDTV  114 (166)
Q Consensus        43 ~~~~i~~~~~--~~~~l~-~~~~d--~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~--~v~~~d~~  114 (166)
                      +...+.+++|  +++.|+ +.+.+  ..|.+|++.+++. ..+..+........|+|+++.++..+. ++  .+.++|+.
T Consensus       232 ~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~  310 (417)
T TIGR02800       232 FPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQL-TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDAD  310 (417)
T ss_pred             CCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCE-EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECC
Confidence            3344556777  666665 44444  3588889887643 333334444556789999988766543 33  57778887


Q ss_pred             CCeeeEEeecccccEEEEEEcC--CeEEEeecCC---cEEEEECCccc
Q psy16373        115 TGACMYSIQAHDGCIHALTYSD--SYVISLGQDE---RLCVWDRFQGH  157 (166)
Q Consensus       115 ~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~---~i~~wd~~~~~  157 (166)
                      +++.. .+..+........|+|  +.++.++.++   .|.+||+.++.
T Consensus       311 ~~~~~-~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~  357 (417)
T TIGR02800       311 GGEVR-RLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGG  357 (417)
T ss_pred             CCCEE-EeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCC
Confidence            66543 3443445567788988  4676666655   78999987754

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PRK05137 tolB translocation protein TolB; Provisional

Probab=98.30  E-value=3.7e-05  Score=56.36  Aligned_cols=93  Identities=17%  Similarity=0.081  Sum_probs=66.3

Q ss_pred             CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecC---CCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--e
Q psy16373         64 HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQ---DGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--Y  138 (166)
Q Consensus        64 ~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~  138 (166)
                      ..|.++|... .....+..+...+.+..|+|+++.++..+.   +..+.+||+.+++.. .+..+.+.+...+|+|+  .
T Consensus       182 ~~l~~~d~dg-~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~  259 (435)
T PRK05137        182 KRLAIMDQDG-ANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRK  259 (435)
T ss_pred             eEEEEECCCC-CCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCE
Confidence            3788888754 444556667888999999999998877653   468999999887653 34445567778899983  4


Q ss_pred             E-EEeecCCc--EEEEECCcccc
Q psy16373        139 V-ISLGQDER--LCVWDRFQGHL  158 (166)
Q Consensus       139 l-~~~~~d~~--i~~wd~~~~~~  158 (166)
                      | ++.+.++.  |.+||+.+++.
T Consensus       260 la~~~~~~g~~~Iy~~d~~~~~~  282 (435)
T PRK05137        260 VVMSLSQGGNTDIYTMDLRSGTT  282 (435)
T ss_pred             EEEEEecCCCceEEEEECCCCce
Confidence            4 45555554  77789877654

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.30  E-value=0.0002  Score=52.17  Aligned_cols=116  Identities=15%  Similarity=0.042  Sum_probs=75.6

Q ss_pred             eeccCCceEEEEe--cCcEEEEEecC---CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEE-EecCCC--cEEEE
Q psy16373         40 TRAHHQPITVLEC--VSNRVITGSQD---HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSG-SGSQDG--LLCVW  111 (166)
Q Consensus        40 ~~~~~~~i~~~~~--~~~~l~~~~~d---~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d~--~v~~~  111 (166)
                      +..+...+.+.+|  +++.|+.+...   ..|.+||+.+++... +..+...+.+.+|+|+++.++ +.+.++  .+++|
T Consensus       185 l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~  263 (417)
T TIGR02800       185 ITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVM  263 (417)
T ss_pred             eecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEECCCCCccEEEE
Confidence            3345556777888  78888876643   579999998875432 233445567789999988765 444444  58889


Q ss_pred             eCcCCeeeEEeecccccEEEEEEcC--CeEEEeec-CC--cEEEEECCccc
Q psy16373        112 DTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQ-DE--RLCVWDRFQGH  157 (166)
Q Consensus       112 d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~-d~--~i~~wd~~~~~  157 (166)
                      |+.++.. ..+..+........|+|  ..|+..+. ++  .|.++|+.+++
T Consensus       264 d~~~~~~-~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~  313 (417)
T TIGR02800       264 DLDGKQL-TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGE  313 (417)
T ss_pred             ECCCCCE-EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence            9887654 33333444445678887  35655443 33  58888887655

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG2041|consensus

Probab=98.22  E-value=1.5e-05  Score=60.10  Aligned_cols=94  Identities=19%  Similarity=0.295  Sum_probs=73.6

Q ss_pred             cCCceEEEEe--cCcEEEEEecCCeEEEEEccccc---------------ceehhcCCCCceEEEEEcCCCCEEEEecCC
Q psy16373         43 HHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ---------------LLFTLHGHCGPITTLFIDGVSMMSGSGSQD  105 (166)
Q Consensus        43 ~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~---------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d  105 (166)
                      ......|++|  +..++++|+.||.+++..+.+..               .-+++.+|...|..+.|+...+.+-+...+
T Consensus        13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~   92 (1189)
T KOG2041|consen   13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTS   92 (1189)
T ss_pred             CCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCC
Confidence            3456889999  78899999999999999876431               234678999999999999999999999999


Q ss_pred             CcEEEEeCcCCeeeEEeec--ccccEEEEEEcC
Q psy16373        106 GLLCVWDTVTGACMYSIQA--HDGCIHALTYSD  136 (166)
Q Consensus       106 ~~v~~~d~~~~~~~~~~~~--~~~~v~~i~~~~  136 (166)
                      |.|.+|-+-.++..-.+..  .++.|.++.|+.
T Consensus        93 GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~  125 (1189)
T KOG2041|consen   93 GLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNL  125 (1189)
T ss_pred             ceEEEEeeecccHHHHHhhCcCccEEEEEEEcC
Confidence            9999999877755444322  234667777764

>PRK03629 tolB translocation protein TolB; Provisional

Probab=98.22  E-value=0.00031  Score=51.50  Aligned_cols=116  Identities=10%  Similarity=-0.010  Sum_probs=70.3

Q ss_pred             CCceEEEEe--cCcEEEEEecC-CeEEE--EEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC---CcEEEEeCcC
Q psy16373         44 HQPITVLEC--VSNRVITGSQD-HTLKV--YKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD---GLLCVWDTVT  115 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~~~~~d-~~v~v--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d---~~v~~~d~~~  115 (166)
                      ...+....|  +++.|+..+.+ +...+  +|+.+++. ..+...........|+|+++.++..+.+   ..+.+||+.+
T Consensus       286 ~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~  364 (429)
T PRK03629        286 RSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT  364 (429)
T ss_pred             CCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe-EEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCC
Confidence            345667778  77877766653 44444  46665543 2333333445678899999988775443   3588899987


Q ss_pred             CeeeEEeecccccEEEEEEcCC--eEEEeecCCc---EEEEECCcccceeeee
Q psy16373        116 GACMYSIQAHDGCIHALTYSDS--YVISLGQDER---LCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       116 ~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~---i~~wd~~~~~~~~~~~  163 (166)
                      ++.. .+.. ........|+|+  .++.++.++.   +.++++ +|+....+.
T Consensus       365 g~~~-~Lt~-~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~  414 (429)
T PRK03629        365 GGVQ-VLTD-TFLDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLP  414 (429)
T ss_pred             CCeE-EeCC-CCCCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECc
Confidence            7643 3332 122345678884  6777776653   677776 455555443

>KOG1832|consensus

Probab=98.17  E-value=2.4e-06  Score=65.71  Aligned_cols=122  Identities=17%  Similarity=0.197  Sum_probs=93.8

Q ss_pred             eeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCC--cEEEEe
Q psy16373         37 VESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDG--LLCVWD  112 (166)
Q Consensus        37 ~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~--~v~~~d  112 (166)
                      ...+..|....+|++|  ..+.|+.|+-.|.|+++++.+|.......+|.++|+-+.-+.+|..+++.+...  ...+|+
T Consensus      1094 w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~ 1173 (1516)
T KOG1832|consen 1094 WRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWD 1173 (1516)
T ss_pred             chhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhc
Confidence            3456678888999999  778999999999999999999999889999999999999999988887765443  466898


Q ss_pred             CcC-CeeeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCcccceeee
Q psy16373        113 TVT-GACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       113 ~~~-~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      +.+ +.+..+|.    ...++.|+..  .-+.|+......+||+.++.++.++
T Consensus      1174 ~~s~~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~ty 1222 (1516)
T KOG1832|consen 1174 ASSTGGPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTY 1222 (1516)
T ss_pred             cccccCcccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHh
Confidence            763 33444443    3456788762  3344444456789999999887763

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.17  E-value=0.00061  Score=55.24  Aligned_cols=112  Identities=9%  Similarity=-0.007  Sum_probs=75.3

Q ss_pred             eEEEEe--cCc-EEEEEecCCeEEEEEccccccee-------------hhcC--------CCCceEEEEEcCCCCEEEEe
Q psy16373         47 ITVLEC--VSN-RVITGSQDHTLKVYKLEDQQLLF-------------TLHG--------HCGPITTLFIDGVSMMSGSG  102 (166)
Q Consensus        47 i~~~~~--~~~-~l~~~~~d~~v~v~~~~~~~~~~-------------~~~~--------~~~~v~~~~~~~~~~~~~~~  102 (166)
                      ...+++  +++ ++++-+.++.|++||+.++....             .+-.        .-.....+++++++..+++-
T Consensus       742 P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVAD  821 (1057)
T PLN02919        742 PSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVAD  821 (1057)
T ss_pred             ccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEE
Confidence            456777  555 45555667999999998654211             0000        01123588999999999998


Q ss_pred             cCCCcEEEEeCcCCeeeEEee-------------cccccEEEEEEcC--CeEEEeecCCcEEEEECCcccc
Q psy16373        103 SQDGLLCVWDTVTGACMYSIQ-------------AHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus       103 ~~d~~v~~~d~~~~~~~~~~~-------------~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      ..++.|++||..++.......             +.-.....+++++  ..+++-+.++.|++||+.+++.
T Consensus       822 s~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        822 SYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             CCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence            999999999998775442221             0112456788887  3666666789999999998865

>smart00320 WD40 WD40 repeats

Probab=98.14  E-value=7.5e-06  Score=37.66  Aligned_cols=37  Identities=41%  Similarity=0.680  Sum_probs=31.8

Q ss_pred             ceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEe
Q psy16373         76 LLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWD  112 (166)
Q Consensus        76 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d  112 (166)
                      ....+..|...|.++.+++.+..+++++.|+.+++|+
T Consensus         4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            3445567888999999999989999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PRK04792 tolB translocation protein TolB; Provisional

Probab=98.14  E-value=0.00056  Score=50.48  Aligned_cols=115  Identities=14%  Similarity=0.040  Sum_probs=72.4

Q ss_pred             ccCCceEEEEe--cCcEEEEEec-C--CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEE-ecCCCc--EEEEeC
Q psy16373         42 AHHQPITVLEC--VSNRVITGSQ-D--HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGS-GSQDGL--LCVWDT  113 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~~~~-d--~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~d~~--v~~~d~  113 (166)
                      .+..++.+..|  +++.|+..+. +  ..|.+||+.+++... +...........|+|+++.++. .+.++.  |.++|+
T Consensus       215 ~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl  293 (448)
T PRK04792        215 RSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDI  293 (448)
T ss_pred             cCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEEC
Confidence            44557777888  7887776553 2  358888988775422 2222233457899999987764 455664  777888


Q ss_pred             cCCeeeEEeecccccEEEEEEcCC--eEEEee-cCC--cEEEEECCcccc
Q psy16373        114 VTGACMYSIQAHDGCIHALTYSDS--YVISLG-QDE--RLCVWDRFQGHL  158 (166)
Q Consensus       114 ~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~-~d~--~i~~wd~~~~~~  158 (166)
                      .+++. ..+..+........|+|+  .++..+ .++  .|.++|+.+++.
T Consensus       294 ~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~  342 (448)
T PRK04792        294 ATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKV  342 (448)
T ss_pred             CCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence            77654 334444555677889984  454443 333  467778776653

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.07  E-value=8e-05  Score=53.93  Aligned_cols=111  Identities=14%  Similarity=0.178  Sum_probs=78.2

Q ss_pred             ecCcEEEEEecCCeEEEEEcccccceehhcCCC--Cc--------e-EEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373         52 CVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC--GP--------I-TTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY  120 (166)
Q Consensus        52 ~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~--~~--------v-~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~  120 (166)
                      +.++.++.++.++.+.-+|.++++.+.+.....  ..        + .....  .+..+..++.++.+..+|.++++.+.
T Consensus        67 v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~tG~~~W  144 (394)
T PRK11138         67 VAYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAEDGEVAW  144 (394)
T ss_pred             EECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECCEEEEEcCCCEEEEEECCCCCCcc
Confidence            367788888889999999999998876544221  00        0 01111  24566677889999999999999888


Q ss_pred             EeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        121 SIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       121 ~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      +...............+.++.++.++.+..+|.++|+.+.+++.
T Consensus       145 ~~~~~~~~~ssP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~  188 (394)
T PRK11138        145 QTKVAGEALSRPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNL  188 (394)
T ss_pred             cccCCCceecCCEEECCEEEEECCCCEEEEEEccCCCEeeeecC
Confidence            77643322222233456788888899999999999999887754

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.04  E-value=0.001  Score=48.84  Aligned_cols=112  Identities=13%  Similarity=0.077  Sum_probs=69.8

Q ss_pred             eEEEEe--cCcEEEEEe-cCCeEEEEE--ccc-ccceehhcCCCCceEEEEEcCCCCEEEEecCC---CcEEEEeCcCCe
Q psy16373         47 ITVLEC--VSNRVITGS-QDHTLKVYK--LED-QQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD---GLLCVWDTVTGA  117 (166)
Q Consensus        47 i~~~~~--~~~~l~~~~-~d~~v~v~~--~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d---~~v~~~d~~~~~  117 (166)
                      ....+|  +++.|+..+ .++...+|.  +.. +.....+..+...+....|+|+|+.++....+   ..+.+||+.+++
T Consensus       283 ~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~  362 (428)
T PRK01029        283 QGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGR  362 (428)
T ss_pred             cCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence            345667  777777655 466555554  432 22233344444566788999999988765443   368999998886


Q ss_pred             eeEEeecccccEEEEEEcCC--eEE-Eeec--CCcEEEEECCcccce
Q psy16373        118 CMYSIQAHDGCIHALTYSDS--YVI-SLGQ--DERLCVWDRFQGHLL  159 (166)
Q Consensus       118 ~~~~~~~~~~~v~~i~~~~~--~l~-~~~~--d~~i~~wd~~~~~~~  159 (166)
                      ... +......+....|+|+  .|+ ++..  ...|.++|+..++..
T Consensus       363 ~~~-Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~  408 (428)
T PRK01029        363 DYQ-LTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTR  408 (428)
T ss_pred             eEE-ccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEE
Confidence            543 3322345667889984  444 3332  356888998776643

>KOG4649|consensus

Probab=98.03  E-value=0.00023  Score=47.81  Aligned_cols=112  Identities=13%  Similarity=0.094  Sum_probs=84.0

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccc-cE-E
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDG-CI-H  130 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~-~v-~  130 (166)
                      ...+++.|+..+.+..-|.+++....+-. -...+.+-+.- -+++++.|...|.+++.+.++++.+..+...+. .+ .
T Consensus        22 skT~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a   99 (354)
T KOG4649|consen   22 SKTLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRA   99 (354)
T ss_pred             CceEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccce
Confidence            35678888999999999999987765432 12233332221 367899999999999999999988888765432 22 2


Q ss_pred             EEEEcCCeEEEeecCCcEEEEECCcccceeeeeecC
Q psy16373        131 ALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQG  166 (166)
Q Consensus       131 ~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~  166 (166)
                      .++++...++.++.|+..+.-|.++..++.+.+++|
T Consensus       100 ~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG  135 (354)
T KOG4649|consen  100 QCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGG  135 (354)
T ss_pred             EEcCCCceEEEecCCCcEEEecccccceEEecccCC
Confidence            355666899999999999999999999998877654

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.02  E-value=0.00086  Score=48.63  Aligned_cols=111  Identities=14%  Similarity=0.168  Sum_probs=76.1

Q ss_pred             EecCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccE-
Q psy16373         51 ECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCI-  129 (166)
Q Consensus        51 ~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v-  129 (166)
                      ...++.++.++.++.+..+|.++++.+.+.........+..+.  +..++.+..++.+..+|.++++.+..+....... 
T Consensus       117 ~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v~--~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~  194 (394)
T PRK11138        117 TVAGGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVVS--DGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLT  194 (394)
T ss_pred             EEECCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEEE--CCEEEEECCCCEEEEEEccCCCEeeeecCCCCccc
Confidence            3467778888899999999999999887765433211122222  3456667788999999999999888775421111 


Q ss_pred             ----EEEEEcCCeEEEeecCCcEEEEECCcccceeeee
Q psy16373        130 ----HALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       130 ----~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                          ..-....+.++.++.++.+...|..+|+.+.+.+
T Consensus       195 ~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~  232 (394)
T PRK11138        195 LRGESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQR  232 (394)
T ss_pred             ccCCCCCEEECCEEEEEcCCCEEEEEEccCChhhheec
Confidence                1111223567778889999999999998877654

>KOG2114|consensus

Probab=98.02  E-value=0.0016  Score=50.39  Aligned_cols=155  Identities=14%  Similarity=0.160  Sum_probs=96.1

Q ss_pred             EEEEecCCCc----eEEEeeccccccee-ecee---eeeeee--ccCCceEEEEe--cCcEEEEEecCCeEEEEEcc--c
Q psy16373          8 IHLRTGSAGS----LLDFKKMQVEEEMT-LTCC---KVESTR--AHHQPITVLEC--VSNRVITGSQDHTLKVYKLE--D   73 (166)
Q Consensus         8 ~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~---~~~~~~--~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~--~   73 (166)
                      .++..|-++.    .+++|+.+...... ..+.   .+.+.+  ....|+.+++.  +-..+++|-.+|.|..+.-.  .
T Consensus        79 ~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~R  158 (933)
T KOG2114|consen   79 FLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILR  158 (933)
T ss_pred             EEEEEeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchh
Confidence            4555555555    78899987653322 2222   222212  23567888888  66779999999999887432  1


Q ss_pred             ccceeh--hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee-eEEeecccccEEEEEEcCC-e-EEEeecCCcE
Q psy16373         74 QQLLFT--LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC-MYSIQAHDGCIHALTYSDS-Y-VISLGQDERL  148 (166)
Q Consensus        74 ~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~-~~~~~~~~~~v~~i~~~~~-~-l~~~~~d~~i  148 (166)
                      .+-.+.  ....+.+|+.+.+..++..++-...-..|.+|.+....+ ...+..|+.++.+..+++. . ++++ .+..+
T Consensus       159 Drgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca-~~e~l  237 (933)
T KOG2114|consen  159 DRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICA-GSEFL  237 (933)
T ss_pred             ccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEe-cCceE
Confidence            111111  122467899999988766622223345788998874442 4446777889999999983 2 4444 45679


Q ss_pred             EEEECCcccceeeee
Q psy16373        149 CVWDRFQGHLLSTIQ  163 (166)
Q Consensus       149 ~~wd~~~~~~~~~~~  163 (166)
                      .+|+.....+-..+.
T Consensus       238 ~fY~sd~~~~cfaf~  252 (933)
T KOG2114|consen  238 YFYDSDGRGPCFAFE  252 (933)
T ss_pred             EEEcCCCcceeeeec
Confidence            999987655555554

>KOG4640|consensus

Probab=98.01  E-value=5e-05  Score=56.33  Aligned_cols=90  Identities=19%  Similarity=0.192  Sum_probs=70.8

Q ss_pred             ceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceE-EEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe
Q psy16373         46 PITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPIT-TLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI  122 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~  122 (166)
                      .+.-+.|  .-+++|.+..+|.+.+..+. .+.+.++.-+...++ +++|.|+|+.++.|-.||+|++.|+.++..+..+
T Consensus        22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~  100 (665)
T KOG4640|consen   22 NIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSF  100 (665)
T ss_pred             ceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceecc
Confidence            4556677  44579999999999999988 666777776666666 9999999999999999999999999988777663


Q ss_pred             e-cccccEEEEEEcC
Q psy16373        123 Q-AHDGCIHALTYSD  136 (166)
Q Consensus       123 ~-~~~~~v~~i~~~~  136 (166)
                      . .-...|.++.|.+
T Consensus       101 ~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen  101 LFSVETDISKGIWDR  115 (665)
T ss_pred             ccccccchheeeccc
Confidence            1 1245677777753

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=98.00  E-value=0.00071  Score=39.60  Aligned_cols=88  Identities=17%  Similarity=0.315  Sum_probs=62.3

Q ss_pred             cEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEE
Q psy16373         55 NRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTY  134 (166)
Q Consensus        55 ~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~  134 (166)
                      +.|+.|+.|..|++|+-.  +.+.++. ..+.|++++.... ..++-+..+|+|-+|+-  ...+...+. +..++++.+
T Consensus        16 ~eLlvGs~D~~IRvf~~~--e~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~--~~RlWRiKS-K~~~~~~~~   88 (111)
T PF14783_consen   16 NELLVGSDDFEIRVFKGD--EIVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDR--SQRLWRIKS-KNQVTSMAF   88 (111)
T ss_pred             ceEEEecCCcEEEEEeCC--cEEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeC--cceeeeecc-CCCeEEEEE
Confidence            679999999999999875  4455554 4567888877665 66888999999999985  333334443 334566665


Q ss_pred             cC-C-----eEEEeecCCcEE
Q psy16373        135 SD-S-----YVISLGQDERLC  149 (166)
Q Consensus       135 ~~-~-----~l~~~~~d~~i~  149 (166)
                      .+ +     .|++|-.+|.|-
T Consensus        89 ~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   89 YDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             EcCCCCCceEEEEEecCCeEE
Confidence            43 2     788888888764

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=97.99  E-value=0.00068  Score=48.17  Aligned_cols=100  Identities=12%  Similarity=0.056  Sum_probs=76.0

Q ss_pred             CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecC----------CCcEEEEeCcCCeeeEEeecccc------
Q psy16373         64 HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQ----------DGLLCVWDTVTGACMYSIQAHDG------  127 (166)
Q Consensus        64 ~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----------d~~v~~~d~~~~~~~~~~~~~~~------  127 (166)
                      ++|.+.|..+.+.+..+..-..+-. + ++|+++.+..+..          +..|.+||..+.+.+..+.-...      
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G~~P~~-~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~  104 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGGFLPNP-V-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG  104 (352)
T ss_pred             ceEEEEECCCCEEEEEEEccCCCce-e-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence            8999999999988887775443333 4 8999887776654          67999999999999988763222      


Q ss_pred             -cEEEEEEcC--CeEEEeec--CCcEEEEECCcccceeeeeec
Q psy16373        128 -CIHALTYSD--SYVISLGQ--DERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       128 -~v~~i~~~~--~~l~~~~~--d~~i~~wd~~~~~~~~~~~~~  165 (166)
                       .-..++++|  .+++....  +..|.+.|+.+++.+.++..+
T Consensus       105 ~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp  147 (352)
T TIGR02658       105 TYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVP  147 (352)
T ss_pred             CccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCC
Confidence             223577787  36776663  689999999999999988765

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>smart00320 WD40 WD40 repeats

Probab=97.99  E-value=3.6e-05  Score=35.22  Aligned_cols=37  Identities=24%  Similarity=0.632  Sum_probs=31.2

Q ss_pred             CeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEE
Q psy16373        116 GACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWD  152 (166)
Q Consensus       116 ~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd  152 (166)
                      +++...+..|...|.++.|++  ..+++++.|+.+++|+
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            345667778888999999987  4899999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG2079|consensus

Probab=97.98  E-value=6.5e-05  Score=58.98  Aligned_cols=107  Identities=15%  Similarity=0.271  Sum_probs=79.8

Q ss_pred             CceEEEEecCcEEEEEecCCeEEEEEcccc-cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee
Q psy16373         45 QPITVLECVSNRVITGSQDHTLKVYKLEDQ-QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ  123 (166)
Q Consensus        45 ~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~  123 (166)
                      ..+.+.+..+..++.|+..|.+...|...+ .+...=..-+++|++++|+.+|..++.|-.+|.|.+||+.+++.++.+.
T Consensus        90 ~~v~s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~  169 (1206)
T KOG2079|consen   90 AGVISSAIVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVIT  169 (1206)
T ss_pred             cceeeeeeeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeee
Confidence            344455556777888898999998888753 2222222346789999999999999999999999999999999999888


Q ss_pred             cccccEEEEEEc----C-CeEEEeecCCcEEEEEC
Q psy16373        124 AHDGCIHALTYS----D-SYVISLGQDERLCVWDR  153 (166)
Q Consensus       124 ~~~~~v~~i~~~----~-~~l~~~~~d~~i~~wd~  153 (166)
                      .|..+.+.+-+.    . ..++++...|.  +|.+
T Consensus       170 e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  170 EHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             ecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence            777766665553    3 35777777775  5654

>KOG2315|consensus

Probab=97.97  E-value=0.00041  Score=50.90  Aligned_cols=97  Identities=12%  Similarity=0.215  Sum_probs=72.3

Q ss_pred             CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEe--cCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeE
Q psy16373         64 HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSG--SQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYV  139 (166)
Q Consensus        64 ~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l  139 (166)
                      .++++.+++.......+. ..++|+++.|+|.++.++.+  -.--.+.++|++ +.++..+  .+++-+++-|+|  +++
T Consensus       251 q~Lyll~t~g~s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df--~egpRN~~~fnp~g~ii  326 (566)
T KOG2315|consen  251 QTLYLLATQGESVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF--PEGPRNTAFFNPHGNII  326 (566)
T ss_pred             ceEEEEEecCceEEEecC-CCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC--CCCCccceEECCCCCEE
Confidence            367777776434444433 57899999999999877665  334578899984 6666665  367778999999  577


Q ss_pred             EEeecC---CcEEEEECCcccceeeeee
Q psy16373        140 ISLGQD---ERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       140 ~~~~~d---~~i~~wd~~~~~~~~~~~~  164 (166)
                      +.++.+   |.|-+||+.+.+++.++..
T Consensus       327 ~lAGFGNL~G~mEvwDv~n~K~i~~~~a  354 (566)
T KOG2315|consen  327 LLAGFGNLPGDMEVWDVPNRKLIAKFKA  354 (566)
T ss_pred             EEeecCCCCCceEEEeccchhhcccccc
Confidence            777764   8899999999888887764

>KOG4649|consensus

Probab=97.97  E-value=0.0019  Score=43.63  Aligned_cols=108  Identities=14%  Similarity=0.073  Sum_probs=73.4

Q ss_pred             CceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee
Q psy16373         45 QPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ  123 (166)
Q Consensus        45 ~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~  123 (166)
                      ..|.+-+. -+++++.|+..|.+++.+..++.....+..-...=......+++..+..++.|+..+..|.++..++.+.+
T Consensus        53 ~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVyksk  132 (354)
T KOG4649|consen   53 VRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSK  132 (354)
T ss_pred             ceeeeeeEEECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecc
Confidence            34555555 78889999999999999999998887766432222234457788999999999999999999998888765


Q ss_pred             cccccEEEEEEcC--CeEEEeecCCcEEEEE
Q psy16373        124 AHDGCIHALTYSD--SYVISLGQDERLCVWD  152 (166)
Q Consensus       124 ~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd  152 (166)
                      -..+.-.+-+.++  ..|+.+...|.+.--.
T Consensus       133 cgG~~f~sP~i~~g~~sly~a~t~G~vlavt  163 (354)
T KOG4649|consen  133 CGGGTFVSPVIAPGDGSLYAAITAGAVLAVT  163 (354)
T ss_pred             cCCceeccceecCCCceEEEEeccceEEEEc
Confidence            4332212222233  4555555555444333

>KOG3621|consensus

Probab=97.94  E-value=6.9e-05  Score=56.26  Aligned_cols=110  Identities=14%  Similarity=0.196  Sum_probs=83.1

Q ss_pred             ceEEEEecCcEEEEEecCCeEEEEEcccccceehhc-CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeee-----
Q psy16373         46 PITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLH-GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACM-----  119 (166)
Q Consensus        46 ~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~-----  119 (166)
                      ..+|++-.+++++.|+.-|.+.+|+-..++....-. +..+.+....+++...++|.|+..|.|.++-+..+.+.     
T Consensus        37 ~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~  116 (726)
T KOG3621|consen   37 KLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYV  116 (726)
T ss_pred             EEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceee
Confidence            345666689999999999999999988776543222 34455667788998999999999999999987654221     


Q ss_pred             EEe-ecccccEEEEEEcCC--eEEEeecCCcEEEEECCc
Q psy16373        120 YSI-QAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       120 ~~~-~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~  155 (166)
                      ..+ +.|...|+++.|+++  .+++|...|+|..-.+.+
T Consensus       117 t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  117 TPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             ccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence            111 236779999999985  899999999998877665

>PRK00178 tolB translocation protein TolB; Provisional

Probab=97.92  E-value=0.0025  Score=46.78  Aligned_cols=111  Identities=14%  Similarity=0.057  Sum_probs=67.5

Q ss_pred             ceEEEEe--cCcEEE-EEecCC--eEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec-CCC--cEEEEeCcCCe
Q psy16373         46 PITVLEC--VSNRVI-TGSQDH--TLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS-QDG--LLCVWDTVTGA  117 (166)
Q Consensus        46 ~i~~~~~--~~~~l~-~~~~d~--~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~--~v~~~d~~~~~  117 (166)
                      .+....|  +++.|+ +.+.++  .|.++|+.+++.. .+..+........|+|+++.++..+ .++  .+.++|+.+++
T Consensus       244 ~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~  322 (430)
T PRK00178        244 LNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGR  322 (430)
T ss_pred             CcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence            3445667  677766 444444  6888899876543 3444555566788999988776554 333  57777887776


Q ss_pred             eeEEeecccccEEEEEEcC--CeEEEeec-CC--cEEEEECCcccc
Q psy16373        118 CMYSIQAHDGCIHALTYSD--SYVISLGQ-DE--RLCVWDRFQGHL  158 (166)
Q Consensus       118 ~~~~~~~~~~~v~~i~~~~--~~l~~~~~-d~--~i~~wd~~~~~~  158 (166)
                      ... +...........|+|  +.++.... ++  .|.++|+.+++.
T Consensus       323 ~~~-lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~  367 (430)
T PRK00178        323 AER-VTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV  367 (430)
T ss_pred             EEE-eecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCE
Confidence            432 221122234567887  35555443 33  588899887653

>PRK01029 tolB translocation protein TolB; Provisional

Probab=97.88  E-value=0.0024  Score=46.88  Aligned_cols=112  Identities=13%  Similarity=0.046  Sum_probs=64.6

Q ss_pred             eEEEEe--cCcEEEEEec-----CCeEEEEEcccc---cceehhcCCCCceEEEEEcCCCCEEEEec-CCCcEEEE--eC
Q psy16373         47 ITVLEC--VSNRVITGSQ-----DHTLKVYKLEDQ---QLLFTLHGHCGPITTLFIDGVSMMSGSGS-QDGLLCVW--DT  113 (166)
Q Consensus        47 i~~~~~--~~~~l~~~~~-----d~~v~v~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~v~~~--d~  113 (166)
                      ....+|  +|+.|+..+.     +..+..|++..+   +...............+|+|+|+.++..+ .+|...+|  ++
T Consensus       233 ~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~  312 (428)
T PRK01029        233 QLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQI  312 (428)
T ss_pred             ccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEEC
Confidence            334566  7877776542     334455776653   22222222223446789999999777554 46655555  44


Q ss_pred             cC-CeeeEEeecccccEEEEEEcCC--eEEEeecC---CcEEEEECCcccc
Q psy16373        114 VT-GACMYSIQAHDGCIHALTYSDS--YVISLGQD---ERLCVWDRFQGHL  158 (166)
Q Consensus       114 ~~-~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d---~~i~~wd~~~~~~  158 (166)
                      .. +.....+..+...+....|+|+  .|+..+.+   ..|.+||+.+++.
T Consensus       313 ~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~  363 (428)
T PRK01029        313 DPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRD  363 (428)
T ss_pred             cccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCe
Confidence            32 2223444444456678899983  56555432   4699999987764

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=97.88  E-value=0.0024  Score=45.48  Aligned_cols=108  Identities=17%  Similarity=0.134  Sum_probs=76.3

Q ss_pred             cCcEEEEEecCCeEEEEEcccc-----cceehhcC-------CCCceEEEEEcCCCCEEEEec----------CCCcEEE
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQ-----QLLFTLHG-------HCGPITTLFIDGVSMMSGSGS----------QDGLLCV  110 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~-----~~~~~~~~-------~~~~v~~~~~~~~~~~~~~~~----------~d~~v~~  110 (166)
                      ++.+++.... |.|.+.|+...     +....+..       ..+...-+++++++..+....          ..+.|.+
T Consensus       205 dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~V  283 (352)
T TIGR02658       205 SGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFV  283 (352)
T ss_pred             CCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEE
Confidence            5666666555 99999996432     22222111       122334599999977766632          1247999


Q ss_pred             EeCcCCeeeEEeecccccEEEEEEcC--C-eEEEee-cCCcEEEEECCcccceeee
Q psy16373        111 WDTVTGACMYSIQAHDGCIHALTYSD--S-YVISLG-QDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       111 ~d~~~~~~~~~~~~~~~~v~~i~~~~--~-~l~~~~-~d~~i~~wd~~~~~~~~~~  162 (166)
                      +|.++++.+..+.. ...+..+++++  . .+++.. .++.|.+.|..+++.+.++
T Consensus       284 iD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i  338 (352)
T TIGR02658       284 VDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV  338 (352)
T ss_pred             EECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence            99999999998875 45788999998  3 666555 5788999999999999887

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG1645|consensus

Probab=97.86  E-value=6.2e-05  Score=53.09  Aligned_cols=78  Identities=17%  Similarity=0.096  Sum_probs=65.6

Q ss_pred             eeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCc
Q psy16373         39 STRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        39 ~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~  114 (166)
                      -+.++...|..++|   +..++..++.+..+++.|+++...+..+..+ ..+.+.+|..+ .+++..|..+|.|.+||++
T Consensus       188 ~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R  266 (463)
T KOG1645|consen  188 ILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMR  266 (463)
T ss_pred             cccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEcc
Confidence            34567778889999   3447889999999999999999998888877 78999999876 6778888899999999998


Q ss_pred             CCe
Q psy16373        115 TGA  117 (166)
Q Consensus       115 ~~~  117 (166)
                      ..+
T Consensus       267 ~~~  269 (463)
T KOG1645|consen  267 QPE  269 (463)
T ss_pred             CCC
Confidence            653

>KOG3621|consensus

Probab=97.81  E-value=0.00031  Score=52.92  Aligned_cols=134  Identities=18%  Similarity=0.142  Sum_probs=82.8

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccce-----eh
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL-----FT   79 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~-----~~   79 (166)
                      .-.++.|++-|.++++.........      .+..+-.+.+...+.  +..+++.|+..|.|.++-+....+.     ..
T Consensus        45 ~~~l~~GsS~G~lyl~~R~~~~~~~------~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~  118 (726)
T KOG3621|consen   45 EEYLAMGSSAGSVYLYNRHTGEMRK------LKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTP  118 (726)
T ss_pred             CceEEEecccceEEEEecCchhhhc------ccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeecc
Confidence            3456777788888877754433111      111222233333333  6667888889999999988764221     11


Q ss_pred             h-cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC----eeeEEeecccccEEEEEEcCCeEEEeecCC
Q psy16373         80 L-HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG----ACMYSIQAHDGCIHALTYSDSYVISLGQDE  146 (166)
Q Consensus        80 ~-~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~----~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~  146 (166)
                      + +.|...|++++|++++..+.+|...|.|..-.+.+.    ...+.+..-.++|.-+.....+++.++.-.
T Consensus       119 ~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q~~LLVStl~r  190 (726)
T KOG3621|consen  119 CDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQSYLLVSTLTR  190 (726)
T ss_pred             ccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecccceehHhhhhh
Confidence            1 237788999999999999999999999998877662    112222223456666665555554444433

>KOG2066|consensus

Probab=97.75  E-value=0.00015  Score=55.31  Aligned_cols=98  Identities=13%  Similarity=0.082  Sum_probs=75.2

Q ss_pred             CceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec
Q psy16373         45 QPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA  124 (166)
Q Consensus        45 ~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~  124 (166)
                      ..+.|.++.+..|+.|.-+|.|++.+.....  .....|...      ..+|.++++|+.||.+.+..+-+.+...++.-
T Consensus        40 D~is~~av~~~~~~~GtH~g~v~~~~~~~~~--~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df  111 (846)
T KOG2066|consen   40 DAISCCAVHDKFFALGTHRGAVYLTTCQGNP--KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYDF  111 (846)
T ss_pred             hHHHHHHhhcceeeeccccceEEEEecCCcc--ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeEec
Confidence            4577777789999999999999999987443  333334433      55799999999999999999888776666553


Q ss_pred             ccccEEEEEEcCC-------eEEEeecCCcEEEEE
Q psy16373        125 HDGCIHALTYSDS-------YVISLGQDERLCVWD  152 (166)
Q Consensus       125 ~~~~v~~i~~~~~-------~l~~~~~d~~i~~wd  152 (166)
                       ..++.+++++|+       .+++|+.-| +.++.
T Consensus       112 -~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~e  144 (846)
T KOG2066|consen  112 -KRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSE  144 (846)
T ss_pred             -CCcceeEEeccchhhhhhhheeecCcce-EEEeh
Confidence             568889999984       678888777 66654

>PRK04792 tolB translocation protein TolB; Provisional

Probab=97.72  E-value=0.0078  Score=44.55  Aligned_cols=109  Identities=11%  Similarity=0.014  Sum_probs=64.9

Q ss_pred             EEEEe--cCcEEEE-EecCCe--EEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecC-CC--cEEEEeCcCCeee
Q psy16373         48 TVLEC--VSNRVIT-GSQDHT--LKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQ-DG--LLCVWDTVTGACM  119 (166)
Q Consensus        48 ~~~~~--~~~~l~~-~~~d~~--v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~--~v~~~d~~~~~~~  119 (166)
                      ....|  +++.|+. .+.++.  |.++|+.+++. ..+..+........|+|+++.++..+. ++  .+.++|+.+++..
T Consensus       265 ~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~  343 (448)
T PRK04792        265 GAPRFSPDGKKLALVLSKDGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVS  343 (448)
T ss_pred             CCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEE
Confidence            35566  7776654 455664  77778876654 334445555677899999987765543 34  5666777766543


Q ss_pred             EEeecccccEEEEEEcCC--eEEEeec-CC--cEEEEECCcccc
Q psy16373        120 YSIQAHDGCIHALTYSDS--YVISLGQ-DE--RLCVWDRFQGHL  158 (166)
Q Consensus       120 ~~~~~~~~~v~~i~~~~~--~l~~~~~-d~--~i~~wd~~~~~~  158 (166)
                      . +..........+|+|+  .++..+. ++  .|.++|+.+++.
T Consensus       344 ~-Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~  386 (448)
T PRK04792        344 R-LTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAM  386 (448)
T ss_pred             E-EecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCe
Confidence            3 2212222334688883  5555443 34  456678776653

>KOG4640|consensus

Probab=97.62  E-value=0.00057  Score=51.03  Aligned_cols=76  Identities=12%  Similarity=0.080  Sum_probs=66.7

Q ss_pred             CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEE-EEEEcC--CeEEEeecCCcEEEEECCcccceee
Q psy16373         85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIH-ALTYSD--SYVISLGQDERLCVWDRFQGHLLST  161 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~-~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~  161 (166)
                      ..+.-+.|+|.-..+|.+..+|.+.+..+. ...+.++.-+...++ +++|.|  ..++.|=.||+|++.|+.++..+..
T Consensus        21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~   99 (665)
T KOG4640|consen   21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVS   99 (665)
T ss_pred             cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceec
Confidence            457788999999999999999999999887 778888886777777 999998  4888888999999999999988876

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=97.58  E-value=0.015  Score=42.58  Aligned_cols=81  Identities=14%  Similarity=0.140  Sum_probs=64.8

Q ss_pred             eeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCC----cEEEEeC
Q psy16373         40 TRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDG----LLCVWDT  113 (166)
Q Consensus        40 ~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~----~v~~~d~  113 (166)
                      +.+..+.|.++..  +|.+++.+.....+.+.|+.++.....-+...+-|+.+.|+|+++++|-+--+|    .|+++|+
T Consensus       397 ~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm  476 (668)
T COG4946         397 IEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDM  476 (668)
T ss_pred             eeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEec
Confidence            4455677888888  778899988889999999999876554455667899999999999999876665    6899999


Q ss_pred             cCCeeeE
Q psy16373        114 VTGACMY  120 (166)
Q Consensus       114 ~~~~~~~  120 (166)
                      ..++...
T Consensus       477 ~~~Kiy~  483 (668)
T COG4946         477 DGGKIYD  483 (668)
T ss_pred             CCCeEEE
Confidence            8776543

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.50  E-value=0.00055  Score=33.71  Aligned_cols=34  Identities=6%  Similarity=0.104  Sum_probs=29.4

Q ss_pred             cccEEEEEEcC--CeEEEeecCCcEEEEECCccccee
Q psy16373        126 DGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus       126 ~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      ...|..+.|+|  +.++.+..+|.|.+|.+ +++.+.
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qriw   46 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQRIW   46 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcCcc
Confidence            45799999999  79999999999999998 676654

>KOG1008|consensus

Probab=97.49  E-value=2e-05  Score=58.58  Aligned_cols=138  Identities=17%  Similarity=0.251  Sum_probs=92.2

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEe----cCCeEEEEEcccc--cce
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGS----QDHTLKVYKLEDQ--QLL   77 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~----~d~~v~v~~~~~~--~~~   77 (166)
                      +-.++.|...|.|.+-........     -....+++..+.++++|   +.+.|+.|-    .|..+.+||+.+.  -+.
T Consensus        70 ~cIlavG~atG~I~l~s~r~~hdS-----s~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPk  144 (783)
T KOG1008|consen   70 RCILAVGSATGNISLLSVRHPHDS-----SAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPK  144 (783)
T ss_pred             hhhhhhccccCceEEeecCCcccc-----cceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCc
Confidence            456777888888877665444322     12234578889999999   567788873    5788999999876  221


Q ss_pred             --ehhcC-CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe-eeEEeecccccEEEEEEc---CCeEEEeecCCcEEE
Q psy16373         78 --FTLHG-HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA-CMYSIQAHDGCIHALTYS---DSYVISLGQDERLCV  150 (166)
Q Consensus        78 --~~~~~-~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~-~~~~~~~~~~~v~~i~~~---~~~l~~~~~d~~i~~  150 (166)
                        ..+.+ ......+++|..+...+.+|...+.+.++|+|... ....+.  +.-+..+..+   ++++++-. |+.|.+
T Consensus       145 e~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svn--Tk~vqG~tVdp~~~nY~cs~~-dg~iAi  221 (783)
T KOG1008|consen  145 ESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVN--TKYVQGITVDPFSPNYFCSNS-DGDIAI  221 (783)
T ss_pred             cccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhh--hhhcccceecCCCCCceeccc-cCceee
Confidence              12222 33445688888888899999999999999998442 222222  2334444444   46765554 999999


Q ss_pred             EE
Q psy16373        151 WD  152 (166)
Q Consensus       151 wd  152 (166)
                      ||
T Consensus       222 wD  223 (783)
T KOG1008|consen  222 WD  223 (783)
T ss_pred             cc
Confidence            99

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=97.48  E-value=0.003  Score=47.23  Aligned_cols=106  Identities=13%  Similarity=0.114  Sum_probs=72.4

Q ss_pred             EEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEE-----------------ecCCCcEEEEeCcCCee
Q psy16373         56 RVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGS-----------------GSQDGLLCVWDTVTGAC  118 (166)
Q Consensus        56 ~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----------------~~~d~~v~~~d~~~~~~  118 (166)
                      .++.++.+|.+...|.++++.+......   ...+..+| +..++.                 ...+|.+.-.|+++++.
T Consensus       303 ~V~~g~~~G~l~ald~~tG~~~W~~~~~---~~~~~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~  378 (488)
T cd00216         303 AIVHAPKNGFFYVLDRTTGKLISARPEV---EQPMAYDP-GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKV  378 (488)
T ss_pred             EEEEECCCceEEEEECCCCcEeeEeEee---ccccccCC-ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcE
Confidence            5777888999999999999887654321   01122333 222221                 12467888899999988


Q ss_pred             eEEeeccc--------ccE--EEEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        119 MYSIQAHD--------GCI--HALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       119 ~~~~~~~~--------~~v--~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      +.+.....        .+.  ..+....+.++.++.|+.|+.+|.++|+.+.+++++
T Consensus       379 ~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~lW~~~~~  435 (488)
T cd00216         379 VWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKELWKFRTP  435 (488)
T ss_pred             eeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCceeeEEECC
Confidence            87765321        111  234455678999999999999999999999988764

The alignment model contains an 8-bladed beta-propeller.

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=97.43  E-value=0.0033  Score=46.98  Aligned_cols=111  Identities=18%  Similarity=0.136  Sum_probs=74.7

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCCC------ce-E-EEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG------PI-T-TLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA  124 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~------~v-~-~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~  124 (166)
                      .++.++.++.++.+...|.++++.+..+.....      .+ . .+.+. ++..++.++.++.+.-+|.++++.+..+..
T Consensus        60 ~~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~  138 (488)
T cd00216          60 VDGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGN  138 (488)
T ss_pred             ECCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecC
Confidence            567777888899999999999988766543222      00 0 11111 125677778899999999999999887754


Q ss_pred             cccc-----E-EEEEEcCCeEEEee---------cCCcEEEEECCcccceeeeee
Q psy16373        125 HDGC-----I-HALTYSDSYVISLG---------QDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       125 ~~~~-----v-~~i~~~~~~l~~~~---------~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ....     + ....+..+.++.++         .++.+..+|..+|+.+.+++.
T Consensus       139 ~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~  193 (488)
T cd00216         139 NDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYT  193 (488)
T ss_pred             CCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeec
Confidence            3221     1 11223335565554         367899999999999988764

The alignment model contains an 8-bladed beta-propeller.

>KOG2444|consensus

Probab=97.42  E-value=0.0015  Score=43.08  Aligned_cols=103  Identities=15%  Similarity=0.142  Sum_probs=65.0

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehh-cCCCCceEEE-EEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeeccc-ccE
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTL-HGHCGPITTL-FIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHD-GCI  129 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~-~~~~~~v~~~-~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~v  129 (166)
                      -+..++.|+.+|.|.+|........... ..-...|.++ ..-.++.+..++..||.++.|++...+.+.....|. .++
T Consensus        69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~  148 (238)
T KOG2444|consen   69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESG  148 (238)
T ss_pred             cCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCc
Confidence            5677899999999999988632222211 1122333333 223345678889999999999998888777666666 444


Q ss_pred             EEEEEcC--CeEEEe--ecCCcEEEEECCc
Q psy16373        130 HALTYSD--SYVISL--GQDERLCVWDRFQ  155 (166)
Q Consensus       130 ~~i~~~~--~~l~~~--~~d~~i~~wd~~~  155 (166)
                      .......  ..+..+  +.|..++.|++..
T Consensus       149 e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  149 EELIVVGSDEFLKIADTSHDRVLKKWNVEK  178 (238)
T ss_pred             ceeEEecCCceEEeeccccchhhhhcchhh
Confidence            4333332  355555  5666777776643

>KOG1008|consensus

Probab=97.42  E-value=6.7e-05  Score=55.94  Aligned_cols=133  Identities=14%  Similarity=0.182  Sum_probs=82.7

Q ss_pred             CceEEEeecccccceeeceeeeeeee-ccCCceEEEEe--cCcEEEEEecCCeEEEEEccccc-ceehhcCCCCceEEEE
Q psy16373         16 GSLLDFKKMQVEEEMTLTCCKVESTR-AHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ-LLFTLHGHCGPITTLF   91 (166)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~-~~~~~~~~~~~v~~~~   91 (166)
                      +..+.+|+.+..-..+...   ..+. +......+++|  +..++.+|.....+.++|++... ....+  .+..+..+.
T Consensus       128 ds~~~Iwdi~s~ltvPke~---~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~sv--nTk~vqG~t  202 (783)
T KOG1008|consen  128 DSSLKIWDINSLLTVPKES---PLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSV--NTKYVQGIT  202 (783)
T ss_pred             cCCccceecccccCCCccc---cccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhh--hhhhcccce
Confidence            3456677775542211111   1111 23445668888  77788899999999999998432 11111  233466777


Q ss_pred             EcC-CCCEEEEecCCCcEEEEe-CcCC-eeeEEeecccc----cEEEEEEcC---CeEEEeecC-CcEEEEECC
Q psy16373         92 IDG-VSMMSGSGSQDGLLCVWD-TVTG-ACMYSIQAHDG----CIHALTYSD---SYVISLGQD-ERLCVWDRF  154 (166)
Q Consensus        92 ~~~-~~~~~~~~~~d~~v~~~d-~~~~-~~~~~~~~~~~----~v~~i~~~~---~~l~~~~~d-~~i~~wd~~  154 (166)
                      +.| .++++++- .||.+-+|| .++- .++..+...+.    .+..++|.|   ..+++...| ++|+.+|+.
T Consensus       203 Vdp~~~nY~cs~-~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~  275 (783)
T KOG1008|consen  203 VDPFSPNYFCSN-SDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC  275 (783)
T ss_pred             ecCCCCCceecc-ccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence            888 57777664 499999999 4433 33333332222    488999998   467777665 679999875

>KOG0882|consensus

Probab=97.39  E-value=0.00038  Score=50.03  Aligned_cols=113  Identities=19%  Similarity=0.201  Sum_probs=82.3

Q ss_pred             ccCCceEEEEe-cCcEEEEEecCCeEEEEEccc---ccceehhcCCCCceEEEEEcCCCCEEEEecC-CCcEEEEeCcCC
Q psy16373         42 AHHQPITVLEC-VSNRVITGSQDHTLKVYKLED---QQLLFTLHGHCGPITTLFIDGVSMMSGSGSQ-DGLLCVWDTVTG  116 (166)
Q Consensus        42 ~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~~v~~~d~~~~  116 (166)
                      -|.+.|+.+.. -.+++.+++.||.++.|--..   -+.+..+..|-..+.+++.+.++..+.+.+. |..++++|+.+-
T Consensus         7 mhrd~i~hv~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~   86 (558)
T KOG0882|consen    7 MHRDVITHVFPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENF   86 (558)
T ss_pred             cccceeeeEeeehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeecc
Confidence            46677777777 788999999999999998765   2455666778888888888888888888776 888888877432


Q ss_pred             eee------------------------------------------------EEeecccccEEEEEEcC--CeEEEeecCC
Q psy16373        117 ACM------------------------------------------------YSIQAHDGCIHALTYSD--SYVISLGQDE  146 (166)
Q Consensus       117 ~~~------------------------------------------------~~~~~~~~~v~~i~~~~--~~l~~~~~d~  146 (166)
                      ..+                                                ..-.-|..+|..+..++  +.+++....|
T Consensus        87 DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~g  166 (558)
T KOG0882|consen   87 DMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISG  166 (558)
T ss_pred             chhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccc
Confidence            111                                                01113556777777776  5677777778


Q ss_pred             cEEEEECC
Q psy16373        147 RLCVWDRF  154 (166)
Q Consensus       147 ~i~~wd~~  154 (166)
                      .|.-|...
T Consensus       167 mVEyWs~e  174 (558)
T KOG0882|consen  167 MVEYWSAE  174 (558)
T ss_pred             eeEeecCC
Confidence            88888765

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.36  E-value=0.029  Score=40.87  Aligned_cols=108  Identities=16%  Similarity=0.222  Sum_probs=70.6

Q ss_pred             ceEEEEe--cCcEEEEEecCCeEEEEEcccccce-------------------------------------------ehh
Q psy16373         46 PITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL-------------------------------------------FTL   80 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~-------------------------------------------~~~   80 (166)
                      .|..+++  +...|+.|...|.|.+|....++..                                           .-+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            4667777  5667888888888888866432111                                           111


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee--c------ccccEEEEEEcC-----C-----eEEEe
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ--A------HDGCIHALTYSD-----S-----YVISL  142 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~--~------~~~~v~~i~~~~-----~-----~l~~~  142 (166)
                      ....++|++++.+ +--+++.|..+|.+.+.|+|....++.-.  .      ....++++.|.-     +     .+++|
T Consensus        83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG  161 (395)
T PF08596_consen   83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG  161 (395)
T ss_dssp             ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred             eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence            2336788999886 44588899999999999998887776532  1      123677888852     1     78888


Q ss_pred             ecCCcEEEEECC
Q psy16373        143 GQDERLCVWDRF  154 (166)
Q Consensus       143 ~~d~~i~~wd~~  154 (166)
                      +..|.+.+|.+-
T Consensus       162 Tn~G~v~~fkIl  173 (395)
T PF08596_consen  162 TNSGNVLTFKIL  173 (395)
T ss_dssp             ETTSEEEEEEEE
T ss_pred             eCCCCEEEEEEe
Confidence            999999999874

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.35  E-value=0.0012  Score=32.57  Aligned_cols=34  Identities=12%  Similarity=0.076  Sum_probs=29.7

Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC  118 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~  118 (166)
                      ...|..++|+|....+|.+..+|.|.++.+ +++.
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence            356899999999999999999999999998 5543

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=97.33  E-value=0.023  Score=46.52  Aligned_cols=112  Identities=11%  Similarity=0.040  Sum_probs=70.0

Q ss_pred             EEEEe---cCcEEEEEecCCeEEEEEccccccee--------hhcC------CCCceEEEEEcCCCC-EEEEecCCCcEE
Q psy16373         48 TVLEC---VSNRVITGSQDHTLKVYKLEDQQLLF--------TLHG------HCGPITTLFIDGVSM-MSGSGSQDGLLC  109 (166)
Q Consensus        48 ~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~--------~~~~------~~~~v~~~~~~~~~~-~~~~~~~d~~v~  109 (166)
                      ..+++   ++..+++.+.++.|++||..++....        ...+      .-.....++++|++. .+++-..++.|+
T Consensus       686 ~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Ir  765 (1057)
T PLN02919        686 WDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIR  765 (1057)
T ss_pred             eEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEE
Confidence            45666   24455666678999999987664321        0011      112356799999987 556667778999


Q ss_pred             EEeCcCCeeeEEe-------------ecc--------cccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373        110 VWDTVTGACMYSI-------------QAH--------DGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus       110 ~~d~~~~~~~~~~-------------~~~--------~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      +||+.++......             -..        -.....+++++  +.+++-..++.|++||..++...
T Consensus       766 v~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~  838 (1057)
T PLN02919        766 ALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVT  838 (1057)
T ss_pred             EEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEE
Confidence            9999876432111             000        01124677877  35566667889999999876544

>KOG2444|consensus

Probab=97.32  E-value=0.00099  Score=43.87  Aligned_cols=100  Identities=16%  Similarity=0.165  Sum_probs=64.6

Q ss_pred             EEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcCCC-
Q psy16373          9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC-   84 (166)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~-   84 (166)
                      -++.|..++.+..|.........-      -...-..+|.++-.   ++.+.++++.|+.++.|++..++.+.....|. 
T Consensus        72 ~~~vG~~dg~v~~~n~n~~g~~~d------~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~  145 (238)
T KOG2444|consen   72 KLMVGTSDGAVYVFNWNLEGAHSD------RVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNF  145 (238)
T ss_pred             eEEeecccceEEEecCCccchHHH------hhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccC
Confidence            356677788888777653221100      01112234555555   55688999999999999999888877666666 


Q ss_pred             CceEEEEEcCCCCEEEEe--cCCCcEEEEeCc
Q psy16373         85 GPITTLFIDGVSMMSGSG--SQDGLLCVWDTV  114 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~~--~~d~~v~~~d~~  114 (166)
                      .+...+.....+..++.+  +.|..++.|++.
T Consensus       146 ~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve  177 (238)
T KOG2444|consen  146 ESGEELIVVGSDEFLKIADTSHDRVLKKWNVE  177 (238)
T ss_pred             CCcceeEEecCCceEEeeccccchhhhhcchh
Confidence            555555555556666666  677777777765

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=97.30  E-value=0.014  Score=47.12  Aligned_cols=111  Identities=14%  Similarity=0.138  Sum_probs=74.9

Q ss_pred             CCceEEEEe--cCcEEEEEec------CCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecC---CCcEEEEe
Q psy16373         44 HQPITVLEC--VSNRVITGSQ------DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQ---DGLLCVWD  112 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~~~~~------d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---d~~v~~~d  112 (166)
                      ...-..++|  +|.++++.+.      -..++||+-+ |........-.+--.+++|.|.|+++++.-.   ...|.+|.
T Consensus       209 dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE  287 (928)
T PF04762_consen  209 DDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE  287 (928)
T ss_pred             CCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe
Confidence            335567889  8999998774      2578888876 5544333333334467899999999998754   23566665


Q ss_pred             CcCCeeeEEee----cccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373        113 TVTGACMYSIQ----AHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       113 ~~~~~~~~~~~----~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                       ++|.....|.    .....|..+.|++  +.|+....| .|.+|...+..
T Consensus       288 -rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~-~vqLWt~~NYH  336 (928)
T PF04762_consen  288 -RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLED-RVQLWTRSNYH  336 (928)
T ss_pred             -cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecC-CceEEEeeCCE
Confidence             5665544442    3356899999998  366665544 49999887755

>KOG2114|consensus

Probab=97.28  E-value=0.028  Score=43.97  Aligned_cols=117  Identities=16%  Similarity=0.188  Sum_probs=72.1

Q ss_pred             eeeeccCCc-eEEEEe-cC-cEEEEEecCC-----eEEEEEcccc---c---ce--ehhcC-----CCCceEEEEEcCCC
Q psy16373         38 ESTRAHHQP-ITVLEC-VS-NRVITGSQDH-----TLKVYKLEDQ---Q---LL--FTLHG-----HCGPITTLFIDGVS   96 (166)
Q Consensus        38 ~~~~~~~~~-i~~~~~-~~-~~l~~~~~d~-----~v~v~~~~~~---~---~~--~~~~~-----~~~~v~~~~~~~~~   96 (166)
                      +.++.+... |..+.. ++ ++|++.+.|.     .+++|+++..   .   ++  ..+..     ...++++++++.+-
T Consensus        58 ~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l  137 (933)
T KOG2114|consen   58 RGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDL  137 (933)
T ss_pred             ehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccc
Confidence            344555555 444444 33 5777776654     5899999753   1   11  11122     24568899999999


Q ss_pred             CEEEEecCCCcEEEEeCc----CCeeeEEeecccccEEEEEEcCC---eEEEeecCCcEEEEECCc
Q psy16373         97 MMSGSGSQDGLLCVWDTV----TGACMYSIQAHDGCIHALTYSDS---YVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        97 ~~~~~~~~d~~v~~~d~~----~~~~~~~~~~~~~~v~~i~~~~~---~l~~~~~d~~i~~wd~~~  155 (166)
                      ..+|.|-.+|.|..+.-.    .+....-....+++|+.+++..+   .++.++ -..|.+|.+..
T Consensus       138 ~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~T-t~~V~~y~l~g  202 (933)
T KOG2114|consen  138 KTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVAT-TEQVMLYSLSG  202 (933)
T ss_pred             cEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEe-cceeEEEEecC
Confidence            999999999999988432    12212112223679999999752   333333 45688888873

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=97.27  E-value=0.028  Score=38.40  Aligned_cols=159  Identities=14%  Similarity=0.095  Sum_probs=97.6

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeee-ccCCceEEEEe-c-------CcEEEEEecCCeEEEEEcccc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR-AHHQPITVLEC-V-------SNRVITGSQDHTLKVYKLEDQ   74 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~-~-------~~~l~~~~~d~~v~v~~~~~~   74 (166)
                      |+...++|-+...+.|.+++....+-..+..  ...+. .-...|..+.| +       ...|+.-..+|.++-|-+..+
T Consensus        52 SpD~tlLa~a~S~G~i~vfdl~g~~lf~I~p--~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~g  129 (282)
T PF15492_consen   52 SPDCTLLAYAESTGTIRVFDLMGSELFVIPP--AMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVG  129 (282)
T ss_pred             CCCCcEEEEEcCCCeEEEEecccceeEEcCc--ccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcc
Confidence            4567788888888898888765433212111  11112 22356777877 2       125677778888888876432


Q ss_pred             -----cceehhc--C-CCCceEEEEEcCCCCEEEEecCC-C----------cEEEEeCcCCeeeEE--------------
Q psy16373         75 -----QLLFTLH--G-HCGPITTLFIDGVSMMSGSGSQD-G----------LLCVWDTVTGACMYS--------------  121 (166)
Q Consensus        75 -----~~~~~~~--~-~~~~v~~~~~~~~~~~~~~~~~d-~----------~v~~~d~~~~~~~~~--------------  121 (166)
                           +..+.+.  . +...|.++.++|..+.++.|+.. .          -+..|.+-++.+...              
T Consensus       130 t~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~  209 (282)
T PF15492_consen  130 TNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSK  209 (282)
T ss_pred             cCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCcccccccc
Confidence                 2222222  2 35689999999998877766432 1          245564432221110              


Q ss_pred             --------------eec-ccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        122 --------------IQA-HDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       122 --------------~~~-~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                                    .++ ....|..|..+|  ..|++...+|.|.+|++-+-+...+...
T Consensus       210 ~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~  269 (282)
T PF15492_consen  210 RRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQ  269 (282)
T ss_pred             ccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccch
Confidence                          011 234677888888  4899999999999999987776665543

>KOG2079|consensus

Probab=97.18  E-value=0.002  Score=51.19  Aligned_cols=96  Identities=13%  Similarity=0.200  Sum_probs=66.0

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      +...++.|++.+-+...+...+-      .+...-..-.++|++++|  +|..++.|-.+|.|.+||..+++.++.+..|
T Consensus        98 ~~~~ivi~Ts~ghvl~~d~~~nL------~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~  171 (1206)
T KOG2079|consen   98 VVVPIVIGTSHGHVLLSDMTGNL------GPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEH  171 (1206)
T ss_pred             eeeeEEEEcCchhhhhhhhhccc------chhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeec
Confidence            34556777777766655543321      111111234578999999  8899999999999999999999999888877


Q ss_pred             CCceEEEE---EcCCCCEEEEecCCCc
Q psy16373         84 CGPITTLF---IDGVSMMSGSGSQDGL  107 (166)
Q Consensus        84 ~~~v~~~~---~~~~~~~~~~~~~d~~  107 (166)
                      ..+.+.+-   +..++..+.++...|.
T Consensus       172 ~ap~t~vi~v~~t~~nS~llt~D~~Gs  198 (1206)
T KOG2079|consen  172 GAPVTGVIFVGRTSQNSKLLTSDTGGS  198 (1206)
T ss_pred             CCccceEEEEEEeCCCcEEEEccCCCc
Confidence            76655543   3445556777777775

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=97.17  E-value=0.042  Score=38.69  Aligned_cols=108  Identities=10%  Similarity=0.109  Sum_probs=73.6

Q ss_pred             EEEEe--cCcEEEEEec-CCeEEEEEccc-cccee--hhcCCCCc----------eEEEEEcCCCCEEEEecCC-CcEEE
Q psy16373         48 TVLEC--VSNRVITGSQ-DHTLKVYKLED-QQLLF--TLHGHCGP----------ITTLFIDGVSMMSGSGSQD-GLLCV  110 (166)
Q Consensus        48 ~~~~~--~~~~l~~~~~-d~~v~v~~~~~-~~~~~--~~~~~~~~----------v~~~~~~~~~~~~~~~~~d-~~v~~  110 (166)
                      +.+++  ++++++++.. .|.|.++-++. +.+..  ....|.+.          +....+.|+++++++.+.. -.|.+
T Consensus        92 ~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~  171 (346)
T COG2706          92 CYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFL  171 (346)
T ss_pred             eEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEE
Confidence            56666  7778888875 58999999865 32211  11224444          8889999999999887532 27889


Q ss_pred             EeCcCCeeeE----EeecccccEEEEEEcCC--eEEEee-cCCcEEEEECCcc
Q psy16373        111 WDTVTGACMY----SIQAHDGCIHALTYSDS--YVISLG-QDERLCVWDRFQG  156 (166)
Q Consensus       111 ~d~~~~~~~~----~~~~~~~~v~~i~~~~~--~l~~~~-~d~~i~~wd~~~~  156 (166)
                      |++..++...    .++ ....-..|.|+|+  +.+..+ .+++|.+|.....
T Consensus       172 y~~~dg~L~~~~~~~v~-~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~  223 (346)
T COG2706         172 YDLDDGKLTPADPAEVK-PGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPA  223 (346)
T ss_pred             EEcccCccccccccccC-CCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCC
Confidence            9998665322    222 2345578999994  555555 4899999998773

>KOG3617|consensus

Probab=97.14  E-value=0.0015  Score=50.86  Aligned_cols=91  Identities=14%  Similarity=0.185  Sum_probs=69.8

Q ss_pred             cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeE
Q psy16373         62 QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYV  139 (166)
Q Consensus        62 ~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l  139 (166)
                      ..|+|.+|- ++|++-.... ..-.+++++|+|..-.++.|-.-|.+.+|...+.+.-.....|..++..+.|++  +.+
T Consensus        39 r~GSVtIfa-dtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l  116 (1416)
T KOG3617|consen   39 RGGSVTIFA-DTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVL  116 (1416)
T ss_pred             CCceEEEEe-cCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeE
Confidence            357777763 3455432211 122356799999988999999999999999877766555677999999999998  589


Q ss_pred             EEeecCCcEEEEECC
Q psy16373        140 ISLGQDERLCVWDRF  154 (166)
Q Consensus       140 ~~~~~d~~i~~wd~~  154 (166)
                      +++..-|.+.+|...
T Consensus       117 ~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen  117 MTLDNPGSVHLWRYD  131 (1416)
T ss_pred             EEcCCCceeEEEEee
Confidence            999999999999765

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.10  E-value=0.0083  Score=47.07  Aligned_cols=71  Identities=14%  Similarity=0.179  Sum_probs=54.4

Q ss_pred             ccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeC
Q psy16373         42 AHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT  113 (166)
Q Consensus        42 ~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~  113 (166)
                      .......|++- ...+|+.|+.+|.||+||--..+....+.+-..+|..++++.+|++++..+ +..+.+++.
T Consensus       575 ~~~~~Fs~~aTt~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t  646 (794)
T PF08553_consen  575 SSKNNFSCFATTEDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT  646 (794)
T ss_pred             ccCCCceEEEecCCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence            34456778888 788999999999999999543333344556789999999999999887654 556777764

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG2314|consensus

Probab=97.10  E-value=0.042  Score=41.13  Aligned_cols=105  Identities=11%  Similarity=0.097  Sum_probs=73.7

Q ss_pred             EEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecC-----------CCcEEEEeCcC
Q psy16373         49 VLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQ-----------DGLLCVWDTVT  115 (166)
Q Consensus        49 ~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-----------d~~v~~~d~~~  115 (166)
                      -+.|  .|.+|++-..- .|.+|.-++...++.+. |. .|.-+.|+|..++++|=+.           ...++|||+++
T Consensus       215 yv~wSP~GTYL~t~Hk~-GI~lWGG~~f~r~~RF~-Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~t  291 (698)
T KOG2314|consen  215 YVRWSPKGTYLVTFHKQ-GIALWGGESFDRIQRFY-HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIAT  291 (698)
T ss_pred             eEEecCCceEEEEEecc-ceeeecCccHHHHHhcc-CC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccc
Confidence            3455  78888887654 57899888877777765 43 5889999999999998543           24799999999


Q ss_pred             CeeeEEeecc--cccEE-EEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373        116 GACMYSIQAH--DGCIH-ALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       116 ~~~~~~~~~~--~~~v~-~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      |...+.|...  ...++ -..|+.  .+++.-.. ..|.+|+..+..
T Consensus       292 G~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~  337 (698)
T KOG2314|consen  292 GLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFM  337 (698)
T ss_pred             cchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCcee
Confidence            9988887652  22332 356765  35554444 568888865533

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.02  E-value=0.09  Score=41.59  Aligned_cols=106  Identities=13%  Similarity=0.113  Sum_probs=69.8

Q ss_pred             ceEEEEe-------cCcEEEEEecCCeEEEEEccccc--cee-hhc--CCCCceEEEEEcCCCCEEEEecCCCcEEEEeC
Q psy16373         46 PITVLEC-------VSNRVITGSQDHTLKVYKLEDQQ--LLF-TLH--GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT  113 (166)
Q Consensus        46 ~i~~~~~-------~~~~l~~~~~d~~v~v~~~~~~~--~~~-~~~--~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~  113 (166)
                      +|..++.       .++.-+.|-.+..+..||.+-..  .+. ..+  ......+|++-..+| ++|.|+.+|.|++||-
T Consensus       527 ~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~  605 (794)
T PF08553_consen  527 PVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDR  605 (794)
T ss_pred             ceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeecc
Confidence            3666665       24556777788899999998532  221 111  234456788777665 6778999999999994


Q ss_pred             cCCe-eeEEeecccccEEEEEEcCC-eEEEeecCCcEEEEEC
Q psy16373        114 VTGA-CMYSIQAHDGCIHALTYSDS-YVISLGQDERLCVWDR  153 (166)
Q Consensus       114 ~~~~-~~~~~~~~~~~v~~i~~~~~-~l~~~~~d~~i~~wd~  153 (166)
                       .++ ..-.+.+...+|..|..+.+ .-+.|+.+..|.+++.
T Consensus       606 -~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~tyLlLi~t  646 (794)
T PF08553_consen  606 -LGKRAKTALPGLGDPIIGIDVTADGKWILATCKTYLLLIDT  646 (794)
T ss_pred             -cchhhhhcCCCCCCCeeEEEecCCCcEEEEeecceEEEEEE
Confidence             332 22234566789999999873 3333444667777775

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=97.02  E-value=0.1  Score=40.26  Aligned_cols=95  Identities=14%  Similarity=0.128  Sum_probs=63.3

Q ss_pred             EEEecCCeEEEEEcccccceehhc-CCCCceEEEEE--cCCCCEEEEecCCCcEEEEeCc---------CCeeeEEe--e
Q psy16373         58 ITGSQDHTLKVYKLEDQQLLFTLH-GHCGPITTLFI--DGVSMMSGSGSQDGLLCVWDTV---------TGACMYSI--Q  123 (166)
Q Consensus        58 ~~~~~d~~v~v~~~~~~~~~~~~~-~~~~~v~~~~~--~~~~~~~~~~~~d~~v~~~d~~---------~~~~~~~~--~  123 (166)
                      +.-+....+.+||.+.+....+-. ...+.|.+++|  .|+++.+++-+....|.++--.         +..++..+  .
T Consensus        45 ~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~  124 (631)
T PF12234_consen   45 VVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDIS  124 (631)
T ss_pred             EEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEee
Confidence            334456789999999876433222 34678999998  5668888888889999888431         22334333  3


Q ss_pred             ccc-ccEEEEEEcCC-eEEEeecCCcEEEEEC
Q psy16373        124 AHD-GCIHALTYSDS-YVISLGQDERLCVWDR  153 (166)
Q Consensus       124 ~~~-~~v~~i~~~~~-~l~~~~~d~~i~~wd~  153 (166)
                      .++ .+|.+..|.++ .++.++ ++.+.++|-
T Consensus       125 ~~T~h~Igds~Wl~~G~LvV~s-GNqlfv~dk  155 (631)
T PF12234_consen  125 SHTPHPIGDSIWLKDGTLVVGS-GNQLFVFDK  155 (631)
T ss_pred             cCCCCCccceeEecCCeEEEEe-CCEEEEECC
Confidence            344 57889999885 444444 567888874

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.00  E-value=0.043  Score=43.38  Aligned_cols=111  Identities=11%  Similarity=0.061  Sum_probs=75.4

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCCCc--------eEEEEEcC----------------CCCEEEEecCCCcE
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP--------ITTLFIDG----------------VSMMSGSGSQDGLL  108 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~--------v~~~~~~~----------------~~~~~~~~~~d~~v  108 (166)
                      .++.++.++.++.|.-.|..+++.+.++......        ...+.+..                ....++.++.|+.+
T Consensus       193 vgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~L  272 (764)
T TIGR03074       193 VGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARL  272 (764)
T ss_pred             ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeE
Confidence            5778888888999999999999888766532211        12233211                23467778889999


Q ss_pred             EEEeCcCCeeeEEeecccccEE-------------EE----EEcCCeEEEeec----------CCcEEEEECCcccceee
Q psy16373        109 CVWDTVTGACMYSIQAHDGCIH-------------AL----TYSDSYVISLGQ----------DERLCVWDRFQGHLLST  161 (166)
Q Consensus       109 ~~~d~~~~~~~~~~~~~~~~v~-------------~i----~~~~~~l~~~~~----------d~~i~~wd~~~~~~~~~  161 (166)
                      .-.|.++++.+..+.. .+.|.             .+    ....+.++.++.          +|.|+-+|.++|+.+.+
T Consensus       273 iALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~  351 (764)
T TIGR03074       273 IALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWA  351 (764)
T ss_pred             EEEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeE
Confidence            9999999999877642 11110             01    112256777643          68899999999999988


Q ss_pred             eee
Q psy16373        162 IQL  164 (166)
Q Consensus       162 ~~~  164 (166)
                      +..
T Consensus       352 ~~~  354 (764)
T TIGR03074       352 WDP  354 (764)
T ss_pred             Eec
Confidence            764

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=96.96  E-value=0.048  Score=40.37  Aligned_cols=101  Identities=18%  Similarity=0.260  Sum_probs=54.5

Q ss_pred             ceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec
Q psy16373         46 PITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA  124 (166)
Q Consensus        46 ~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~  124 (166)
                      .-....| ..+.+++-..+..|.++.--+.+....++.. ..+..+..   |..+...+.+ .+.+||..+++.++.+..
T Consensus        70 ~g~~~vw~~~n~yAv~~~~~~I~I~kn~~~~~~k~i~~~-~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v  144 (443)
T PF04053_consen   70 SGLSFVWSSRNRYAVLESSSTIKIYKNFKNEVVKSIKLP-FSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDV  144 (443)
T ss_dssp             E-SEEEE-TSSEEEEE-TTS-EEEEETTEE-TT-----S-S-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS
T ss_pred             ceeEEEEecCccEEEEECCCeEEEEEcCccccceEEcCC-cccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEec
Confidence            3445666 5566777777888998633334433333321 23444433   7777766544 899999999999998874


Q ss_pred             ccccEEEEEEcCC--eEEEeecCCcEEEEECC
Q psy16373        125 HDGCIHALTYSDS--YVISLGQDERLCVWDRF  154 (166)
Q Consensus       125 ~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~  154 (166)
                      .  +|..+.|+++  +++..+ +..+.+++..
T Consensus       145 ~--~vk~V~Ws~~g~~val~t-~~~i~il~~~  173 (443)
T PF04053_consen  145 S--AVKYVIWSDDGELVALVT-KDSIYILKYN  173 (443)
T ss_dssp             ---E-EEEEE-TTSSEEEEE--S-SEEEEEE-
T ss_pred             C--CCcEEEEECCCCEEEEEe-CCeEEEEEec
Confidence            3  4899999984  666555 4467777643

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG1920|consensus

Probab=96.95  E-value=0.012  Score=47.54  Aligned_cols=108  Identities=12%  Similarity=0.105  Sum_probs=69.7

Q ss_pred             EEEEe--cCcEEEEEe----cC-CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEe---cCCCcEEEEeCcCCe
Q psy16373         48 TVLEC--VSNRVITGS----QD-HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSG---SQDGLLCVWDTVTGA  117 (166)
Q Consensus        48 ~~~~~--~~~~l~~~~----~d-~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~d~~v~~~d~~~~~  117 (166)
                      .+++|  +|+++++..    .+ ..+++||-+ +..-..-....+.-.+++|-|.|..+++-   ..|+.|.++. ++|.
T Consensus       199 ~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffE-rNGL  276 (1265)
T KOG1920|consen  199 TSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFE-RNGL  276 (1265)
T ss_pred             ceEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEe-cCCc
Confidence            35888  888888732    23 899999987 44322222233444789999999998875   3345788887 3443


Q ss_pred             eeEE----eecccccEEEEEEcC--CeEEE---eecCCcEEEEECCccc
Q psy16373        118 CMYS----IQAHDGCIHALTYSD--SYVIS---LGQDERLCVWDRFQGH  157 (166)
Q Consensus       118 ~~~~----~~~~~~~v~~i~~~~--~~l~~---~~~d~~i~~wd~~~~~  157 (166)
                      .-..    +.....+|..++|+.  +.|++   ......|.+|-+.+-+
T Consensus       277 ~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh  325 (1265)
T KOG1920|consen  277 RHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYH  325 (1265)
T ss_pred             cccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCeE
Confidence            3332    223344589999987  45555   3444559999887654

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=96.88  E-value=0.056  Score=38.28  Aligned_cols=151  Identities=18%  Similarity=0.127  Sum_probs=81.1

Q ss_pred             EEEecCCCceEEEeecccccceeeceeeeeeeeccCCceE-EEEe--cCcEEEEEecCCeEEEEEcccccce--ehhc--
Q psy16373          9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPIT-VLEC--VSNRVITGSQDHTLKVYKLEDQQLL--FTLH--   81 (166)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~--~~~~--   81 (166)
                      ....|++++...+-.....++. ..  ....+.....++. .-.+  .+..++--+.+|.|+--|+......  ..+.  
T Consensus       150 F~~lC~DGsl~~v~Ld~~Gk~~-~~--~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~  226 (342)
T PF06433_consen  150 FSMLCGDGSLLTVTLDADGKEA-QK--STKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLL  226 (342)
T ss_dssp             EEEEETTSCEEEEEETSTSSEE-EE--EEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS
T ss_pred             eEEEecCCceEEEEECCCCCEe-Ee--eccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCccccc
Confidence            4466666666655443333322 11  1123333333333 2233  4455555678888888887654211  1111  


Q ss_pred             -------C-CCCceEEEEEcCCCCE-EEEe--c-----CCC--cEEEEeCcCCeeeEEeecccccEEEEEEcC---CeEE
Q psy16373         82 -------G-HCGPITTLFIDGVSMM-SGSG--S-----QDG--LLCVWDTVTGACMYSIQAHDGCIHALTYSD---SYVI  140 (166)
Q Consensus        82 -------~-~~~~v~~~~~~~~~~~-~~~~--~-----~d~--~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~  140 (166)
                             + ..+.-.-+++++..+. ++.-  +     .|+  .|.++|+.+++.+..+.. +.++.+|..+.   ..|+
T Consensus       227 t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~  305 (342)
T PF06433_consen  227 TDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLY  305 (342)
T ss_dssp             -HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEE
T ss_pred             CccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEE
Confidence                   0 0112234566655333 3321  1     122  588889999999998874 45677888876   3666


Q ss_pred             Eee-cCCcEEEEECCcccceeeee
Q psy16373        141 SLG-QDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       141 ~~~-~d~~i~~wd~~~~~~~~~~~  163 (166)
                      +.+ .++.|.+||..+|+.+.++.
T Consensus       306 ~~~~~~~~l~v~D~~tGk~~~~~~  329 (342)
T PF06433_consen  306 ALSAGDGTLDVYDAATGKLVRSIE  329 (342)
T ss_dssp             EEETTTTEEEEEETTT--EEEEE-
T ss_pred             EEcCCCCeEEEEeCcCCcEEeehh
Confidence            554 57899999999999988775

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PHA02713 hypothetical protein; Provisional

Probab=96.88  E-value=0.02  Score=43.70  Aligned_cols=92  Identities=5%  Similarity=-0.017  Sum_probs=53.1

Q ss_pred             eEEEEEcccccc--eehhcCCCCceEEEEEcCCCCEEEEecCC------CcEEEEeCcC---CeeeEEeecccccEEEEE
Q psy16373         65 TLKVYKLEDQQL--LFTLHGHCGPITTLFIDGVSMMSGSGSQD------GLLCVWDTVT---GACMYSIQAHDGCIHALT  133 (166)
Q Consensus        65 ~v~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~d------~~v~~~d~~~---~~~~~~~~~~~~~v~~i~  133 (166)
                      .+..||.++.+.  +..+....... +++.. ++...+.|+.+      ..+..||..+   +..+..+.........+.
T Consensus       433 ~ve~YDP~td~W~~v~~m~~~r~~~-~~~~~-~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~  510 (557)
T PHA02713        433 KVIRYDTVNNIWETLPNFWTGTIRP-GVVSH-KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTIL  510 (557)
T ss_pred             eEEEECCCCCeEeecCCCCcccccC-cEEEE-CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEE
Confidence            477788876543  22222111111 22222 35666667654      2356799876   344455554445555566


Q ss_pred             EcCCeEEEeecCC--cEEEEECCcccc
Q psy16373        134 YSDSYVISLGQDE--RLCVWDRFQGHL  158 (166)
Q Consensus       134 ~~~~~l~~~~~d~--~i~~wd~~~~~~  158 (166)
                      +.....++|+.|+  .+..||..+.+.
T Consensus       511 ~~~~iyv~Gg~~~~~~~e~yd~~~~~W  537 (557)
T PHA02713        511 HDNTIMMLHCYESYMLQDTFNVYTYEW  537 (557)
T ss_pred             ECCEEEEEeeecceeehhhcCcccccc
Confidence            6667788888887  788888877654

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=96.78  E-value=0.11  Score=37.17  Aligned_cols=109  Identities=12%  Similarity=0.092  Sum_probs=69.8

Q ss_pred             ceEEEEe--cCcEEEEEec-CCeEEEEEccc-ccceeh---h----------cCCCCceEEEEEcCCCCEEEEecC-CCc
Q psy16373         46 PITVLEC--VSNRVITGSQ-DHTLKVYKLED-QQLLFT---L----------HGHCGPITTLFIDGVSMMSGSGSQ-DGL  107 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~~~~-d~~v~v~~~~~-~~~~~~---~----------~~~~~~v~~~~~~~~~~~~~~~~~-d~~  107 (166)
                      .-..+++  ++++|+++.. ++.|.++++.. +.....   +          +......+++.++|+++++++... ...
T Consensus        88 ~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~  167 (345)
T PF10282_consen   88 SPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADR  167 (345)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTE
T ss_pred             CcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCE
Confidence            3445666  7888888774 89999999986 322211   1          112345789999999987777543 348


Q ss_pred             EEEEeCcCCe--e--eEEeec-ccccEEEEEEcCC--eEEEee-cCCcEEEEECC
Q psy16373        108 LCVWDTVTGA--C--MYSIQA-HDGCIHALTYSDS--YVISLG-QDERLCVWDRF  154 (166)
Q Consensus       108 v~~~d~~~~~--~--~~~~~~-~~~~v~~i~~~~~--~l~~~~-~d~~i~~wd~~  154 (166)
                      |.+|++....  .  ...+.. ....-..++|+|+  +++..+ .++.|.++++.
T Consensus       168 v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~  222 (345)
T PF10282_consen  168 VYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYD  222 (345)
T ss_dssp             EEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred             EEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeec
Confidence            9999987554  2  222222 2345678999984  555555 47889999987

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=96.77  E-value=0.091  Score=36.01  Aligned_cols=43  Identities=12%  Similarity=0.097  Sum_probs=36.9

Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeeccc
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHD  126 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~  126 (166)
                      ...|..+..+|++..+++...+|.+.+|++.+-+....+..++
T Consensus       229 ~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~e  271 (282)
T PF15492_consen  229 QDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDE  271 (282)
T ss_pred             CCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhh
Confidence            5668899999999999999999999999998887777665443

>KOG1916|consensus

Probab=96.77  E-value=0.0039  Score=48.92  Aligned_cols=106  Identities=10%  Similarity=0.131  Sum_probs=70.1

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEE-----------EEcCCCCEEEEecCCCcEEEEeCc-----CC
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTL-----------FIDGVSMMSGSGSQDGLLCVWDTV-----TG  116 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~~~~~~~~d~~v~~~d~~-----~~  116 (166)
                      +.-+++.+-.++.+++.++.+... .-+.+|...+..+           ..+|||..++.+..||.++.|.+.     ..
T Consensus       194 ~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~  272 (1283)
T KOG1916|consen  194 NKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVH  272 (1283)
T ss_pred             ccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccH
Confidence            566788888899999988865433 3344465443322           368999999999999999888654     33


Q ss_pred             eeeEEeeccc-ccEEEEEEcC-----------CeEEEeec-CCcEEEEECCcccce
Q psy16373        117 ACMYSIQAHD-GCIHALTYSD-----------SYVISLGQ-DERLCVWDRFQGHLL  159 (166)
Q Consensus       117 ~~~~~~~~~~-~~v~~i~~~~-----------~~l~~~~~-d~~i~~wd~~~~~~~  159 (166)
                      .++..++.|. .+-.|.-++.           .++++++. +..+++|.....+++
T Consensus       273 rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl  328 (1283)
T KOG1916|consen  273 RCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL  328 (1283)
T ss_pred             hhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence            4556666666 3333333442           14555544 677999998877776

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=96.75  E-value=0.076  Score=40.33  Aligned_cols=60  Identities=18%  Similarity=0.231  Sum_probs=42.4

Q ss_pred             CcEEEEeCcCCeeeEEeecccccEEE-EEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        106 GLLCVWDTVTGACMYSIQAHDGCIHA-LTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       106 ~~v~~~d~~~~~~~~~~~~~~~~v~~-i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      |.+.-+|+.+++.............. +.-..+.++.++.||.++.+|.++|+.+.++++.
T Consensus       441 g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g  501 (527)
T TIGR03075       441 GSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTG  501 (527)
T ss_pred             eeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCEeEEEeCC
Confidence            45777888888777765432211111 3334467778888999999999999999988764

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=96.74  E-value=0.24  Score=40.36  Aligned_cols=145  Identities=10%  Similarity=0.062  Sum_probs=84.2

Q ss_pred             ceEEEEecCC---CceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccce--e
Q psy16373          6 HRIHLRTGSA---GSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL--F   78 (166)
Q Consensus         6 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~--~   78 (166)
                      .+.++|+...   ...|.|+..+......+..    .+......|..+.|  +++.|+..-.|. |.+|...+....  +
T Consensus       267 sG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l----~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKq  341 (928)
T PF04762_consen  267 SGNLIASSQRLPDRHDVVFFERNGLRHGEFTL----RFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQ  341 (928)
T ss_pred             CCCEEEEEEEcCCCcEEEEEecCCcEeeeEec----CCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEE
Confidence            3445555543   2345566554443222211    12244567899999  778888866554 999999875422  2


Q ss_pred             hhcC-CCCceEEEEEcCC-CCEEEEecCCCcEEEEeCc----CCe--------eeEEee---------------------
Q psy16373         79 TLHG-HCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTV----TGA--------CMYSIQ---------------------  123 (166)
Q Consensus        79 ~~~~-~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~----~~~--------~~~~~~---------------------  123 (166)
                      ++.. ....+..+.|+|. ...+...+.+|.+..++..    .+.        .+..+.                     
T Consensus       342 ei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~  421 (928)
T PF04762_consen  342 EIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSY  421 (928)
T ss_pred             EEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhce
Confidence            2321 2233455889887 4455555655655544331    110        011110                     


Q ss_pred             --cccccEEEEEEcCC--eEEEeecCCcEEEEECCc
Q psy16373        124 --AHDGCIHALTYSDS--YVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       124 --~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~  155 (166)
                        ....+|.+++|+++  .+++...|+.|.+|....
T Consensus       422 ~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~  457 (928)
T PF04762_consen  422 ELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDL  457 (928)
T ss_pred             EEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEEecC
Confidence              12568999999884  488889999999998543

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=96.72  E-value=0.12  Score=36.91  Aligned_cols=115  Identities=14%  Similarity=0.152  Sum_probs=72.0

Q ss_pred             CceEEEEe--cCcEEEEE-ecCCeEEEEEcc--ccc--ceehhcC----C--CCceEEEEEcCCCCEEEEec-CCCcEEE
Q psy16373         45 QPITVLEC--VSNRVITG-SQDHTLKVYKLE--DQQ--LLFTLHG----H--CGPITTLFIDGVSMMSGSGS-QDGLLCV  110 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~-~~d~~v~v~~~~--~~~--~~~~~~~----~--~~~v~~~~~~~~~~~~~~~~-~d~~v~~  110 (166)
                      ..-..+.|  ++++++.. -.++.|.++++.  +++  .+..+..    .  ......+.++|+++++.++. ....|.+
T Consensus       192 ~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~v  271 (345)
T PF10282_consen  192 SGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISV  271 (345)
T ss_dssp             SSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEE
T ss_pred             CCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEE
Confidence            34567778  66666554 457899999988  332  2222211    1  22578899999999877665 4568999


Q ss_pred             EeCc--CC--eeeEEeecccccEEEEEEcC--CeEEEee-cCCcEEEEEC--Ccccce
Q psy16373        111 WDTV--TG--ACMYSIQAHDGCIHALTYSD--SYVISLG-QDERLCVWDR--FQGHLL  159 (166)
Q Consensus       111 ~d~~--~~--~~~~~~~~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~--~~~~~~  159 (166)
                      |++.  ++  +.+..+.........++++|  ++|++++ .++.|.+|++  .+|...
T Consensus       272 f~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~  329 (345)
T PF10282_consen  272 FDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLT  329 (345)
T ss_dssp             EEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred             EEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEE
Confidence            9983  33  23333333334467899987  5777776 4678999876  455543

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=96.69  E-value=0.039  Score=40.34  Aligned_cols=82  Identities=12%  Similarity=0.126  Sum_probs=59.9

Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEE-EE-Ec---------------C--C--eEEEe
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHA-LT-YS---------------D--S--YVISL  142 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~-i~-~~---------------~--~--~l~~~  142 (166)
                      .-.+.+++.+|.+++.++...-|.|.++|+.++..++.+++-++.=.. +. ..               +  .  .++-+
T Consensus       307 ~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIya  386 (415)
T PF14655_consen  307 KREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYA  386 (415)
T ss_pred             CceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEe
Confidence            445788999999999888877899999999999888777765432110 00 00               0  0  34455


Q ss_pred             ecCCcEEEEECCcccceeeeeec
Q psy16373        143 GQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       143 ~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      ..-|.|.+|++++|..+..+.++
T Consensus       387 prRg~lEvW~~~~g~Rv~a~~v~  409 (415)
T PF14655_consen  387 PRRGILEVWSMRQGPRVAAFNVG  409 (415)
T ss_pred             ccCCeEEEEecCCCCEEEEEEeC
Confidence            66799999999999999988764

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=96.66  E-value=0.054  Score=31.88  Aligned_cols=90  Identities=18%  Similarity=0.110  Sum_probs=58.3

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCCC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG   85 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~   85 (166)
                      ..-|+.|+.|..|++++....         +..+ .-...|.++.. .+..++.+-.+|+|-+|+-..  .+...+. +.
T Consensus        15 ~~eLlvGs~D~~IRvf~~~e~---------~~Ei-~e~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~~~--RlWRiKS-K~   81 (111)
T PF14783_consen   15 ENELLVGSDDFEIRVFKGDEI---------VAEI-TETDKVTSLCSLGGGRFAYALANGTVGVYDRSQ--RLWRIKS-KN   81 (111)
T ss_pred             cceEEEecCCcEEEEEeCCcE---------EEEE-ecccceEEEEEcCCCEEEEEecCCEEEEEeCcc--eeeeecc-CC
Confidence            357888999999998885421         1111 22356777777 778899999999999997743  3333342 33


Q ss_pred             ceEEEEE-cCC---CCEEEEecCCCcEE
Q psy16373         86 PITTLFI-DGV---SMMSGSGSQDGLLC  109 (166)
Q Consensus        86 ~v~~~~~-~~~---~~~~~~~~~d~~v~  109 (166)
                      .+.++.+ ..+   ...+++|-.+|.+-
T Consensus        82 ~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   82 QVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             CeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            3555554 222   24677888888764

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=96.63  E-value=0.078  Score=40.27  Aligned_cols=110  Identities=15%  Similarity=0.091  Sum_probs=72.4

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCC-CceE----------EEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC-GPIT----------TLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS  121 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~-~~v~----------~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~  121 (166)
                      .+..++.++.++.|.-+|.++++.+.++.... ..+.          .+++.  +..++.++.|+.+.-.|.++++.+..
T Consensus        68 ~~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~--~~~v~v~t~dg~l~ALDa~TGk~~W~  145 (527)
T TIGR03075        68 VDGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALY--DGKVFFGTLDARLVALDAKTGKVVWS  145 (527)
T ss_pred             ECCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEE--CCEEEEEcCCCEEEEEECCCCCEEee
Confidence            46778888888999999999998887654211 1111          11221  34566778899999999999998877


Q ss_pred             eecc--cc--cEE-EEEEcCCeEEEeec------CCcEEEEECCcccceeeeee
Q psy16373        122 IQAH--DG--CIH-ALTYSDSYVISLGQ------DERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       122 ~~~~--~~--~v~-~i~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ....  ..  .++ .-....+.++.+..      ++.|..+|.++|+.+.++..
T Consensus       146 ~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~  199 (527)
T TIGR03075       146 KKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYT  199 (527)
T ss_pred             cccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccC
Confidence            6431  11  111 11122356666543      68999999999999887653

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG2314|consensus

Probab=96.62  E-value=0.023  Score=42.43  Aligned_cols=75  Identities=15%  Similarity=0.284  Sum_probs=56.8

Q ss_pred             eEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeec-----------CCcEEEEEC
Q psy16373         87 ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQ-----------DERLCVWDR  153 (166)
Q Consensus        87 v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~-----------d~~i~~wd~  153 (166)
                      -+-+.|+|.|.++++--.-| |.+|--.+...++.|. | ..|.-+.|+|  .+|+|=+.           ...+.|||+
T Consensus       213 etyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-H-p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI  289 (698)
T KOG2314|consen  213 ETYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY-H-PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDI  289 (698)
T ss_pred             eeeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc-C-CCceeeecCCccceEEEecCCccccCcccCCCceEEEEEc
Confidence            36789999999999875554 7799877666666664 3 3567788998  47776543           257999999


Q ss_pred             Ccccceeeeee
Q psy16373        154 FQGHLLSTIQL  164 (166)
Q Consensus       154 ~~~~~~~~~~~  164 (166)
                      ++|.....+.+
T Consensus       290 ~tG~lkrsF~~  300 (698)
T KOG2314|consen  290 ATGLLKRSFPV  300 (698)
T ss_pred             cccchhcceec
Confidence            99999887765

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=96.61  E-value=0.13  Score=35.92  Aligned_cols=50  Identities=10%  Similarity=-0.048  Sum_probs=37.3

Q ss_pred             cCcEEEEEe-----cCCeEEEEEcc-cccceehhcCCCCceEEEEEcCCCCEEEEe
Q psy16373         53 VSNRVITGS-----QDHTLKVYKLE-DQQLLFTLHGHCGPITTLFIDGVSMMSGSG  102 (166)
Q Consensus        53 ~~~~l~~~~-----~d~~v~v~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  102 (166)
                      ++++|++.-     ..|.|-|||.. +.+.+.++..|.-.-..+.+.|++..++.+
T Consensus        61 dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVA  116 (305)
T PF07433_consen   61 DGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVA  116 (305)
T ss_pred             CCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEE
Confidence            788888763     36899999999 557777777776666777788888666554

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=96.59  E-value=0.07  Score=39.47  Aligned_cols=109  Identities=16%  Similarity=0.203  Sum_probs=74.5

Q ss_pred             ccCCceEEEEe--cCcEEE--EEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC---CcEEEEeCc
Q psy16373         42 AHHQPITVLEC--VSNRVI--TGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD---GLLCVWDTV  114 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~--~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d---~~v~~~d~~  114 (166)
                      .-.++|....|  .++.++  +|-....+.++|++.+ ...  ......-+.+.|+|.+++++.++-|   |.+-+||..
T Consensus       272 ~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~--~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~  348 (561)
T COG5354         272 DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRF--YFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPA  348 (561)
T ss_pred             cccccceeeeecccCCceeEEecccccceeecccccc-eEE--ecCCcccccccccCcccEEEEecCCccccceEEeccC
Confidence            34678999999  555544  4456788999999865 332  2334455788899999999987655   689999987


Q ss_pred             CCeeeE-EeecccccEEEEEEcCC--eEEEee------cCCcEEEEECCc
Q psy16373        115 TGACMY-SIQAHDGCIHALTYSDS--YVISLG------QDERLCVWDRFQ  155 (166)
Q Consensus       115 ~~~~~~-~~~~~~~~v~~i~~~~~--~l~~~~------~d~~i~~wd~~~  155 (166)
                      ...... .+.+.  ...-+.|+|+  ++.+..      .|..+.+||+..
T Consensus       349 ~rf~~~~~~~~~--n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g  396 (561)
T COG5354         349 GRFKVAGAFNGL--NTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYG  396 (561)
T ss_pred             CceEEEEEeecC--CceEeeccCCceEEEecCCCcccccCcceEEEEecC
Confidence            665444 55443  3445678884  444442      278899999853

>PRK04043 tolB translocation protein TolB; Provisional

Probab=96.58  E-value=0.19  Score=37.13  Aligned_cols=111  Identities=11%  Similarity=-0.028  Sum_probs=67.6

Q ss_pred             ceEEEEe--cCcE-EEEEec---CCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEE-ecCC--CcEEEEeCcCC
Q psy16373         46 PITVLEC--VSNR-VITGSQ---DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGS-GSQD--GLLCVWDTVTG  116 (166)
Q Consensus        46 ~i~~~~~--~~~~-l~~~~~---d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~d--~~v~~~d~~~~  116 (166)
                      .+....|  +++. ++..+.   +..|.++|+.+++..... ...+......|+|+++.++. .+.+  ..+.++|+.++
T Consensus       189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt-~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g  267 (419)
T PRK04043        189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIA-SSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTK  267 (419)
T ss_pred             CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEe-cCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence            5667777  6664 554333   367888999877554322 24455667789999876654 3333  46788888777


Q ss_pred             eeeEEeecccccEEEEEEcCC--eEEEee-cCC--cEEEEECCcccc
Q psy16373        117 ACMYSIQAHDGCIHALTYSDS--YVISLG-QDE--RLCVWDRFQGHL  158 (166)
Q Consensus       117 ~~~~~~~~~~~~v~~i~~~~~--~l~~~~-~d~--~i~~wd~~~~~~  158 (166)
                      +. ..+..+........|+|+  .|+..+ ..+  .|.+.|+.+++.
T Consensus       268 ~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~  313 (419)
T PRK04043        268 TL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSV  313 (419)
T ss_pred             cE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCe
Confidence            53 334433333345679983  444433 333  588888876654

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=96.52  E-value=0.065  Score=39.11  Aligned_cols=78  Identities=17%  Similarity=0.164  Sum_probs=53.1

Q ss_pred             ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe-------------------------------------------eeEEe
Q psy16373         86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA-------------------------------------------CMYSI  122 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~-------------------------------------------~~~~~  122 (166)
                      .|+.+.+.++...++.+...|.|.+|.....+                                           +..-+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            46778888877777778888887777432110                                           11122


Q ss_pred             ecccccEEEEEEcC-CeEEEeecCCcEEEEECCcccceeeee
Q psy16373        123 QAHDGCIHALTYSD-SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       123 ~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      ....++|++++.+. .+++.|..+|.+.+.|+|.+..++.-.
T Consensus        83 ~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~  124 (395)
T PF08596_consen   83 DAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNEN  124 (395)
T ss_dssp             ---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             eccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeecc
Confidence            33467999999987 899999999999999999988887644

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=96.52  E-value=0.2  Score=39.50  Aligned_cols=72  Identities=11%  Similarity=0.138  Sum_probs=49.6

Q ss_pred             ceEEEEEcCCCCEEEEecCCCcEEEEeCcC---------Cee---eEEe--------ecccccEEEEEEcC-----CeEE
Q psy16373         86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVT---------GAC---MYSI--------QAHDGCIHALTYSD-----SYVI  140 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~---------~~~---~~~~--------~~~~~~v~~i~~~~-----~~l~  140 (166)
                      .|..+.++|+|..++..+..|...+.=.+.         ++.   .+++        ..+...|..+.|+|     .+|+
T Consensus        86 ~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l~  165 (717)
T PF10168_consen   86 EVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHLV  165 (717)
T ss_pred             eEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeEE
Confidence            578899999999999888876444332221         111   1111        12345788999998     3888


Q ss_pred             EeecCCcEEEEECCccc
Q psy16373        141 SLGQDERLCVWDRFQGH  157 (166)
Q Consensus       141 ~~~~d~~i~~wd~~~~~  157 (166)
                      .-+.|+.+++||+...+
T Consensus       166 vLtsdn~lR~y~~~~~~  182 (717)
T PF10168_consen  166 VLTSDNTLRLYDISDPQ  182 (717)
T ss_pred             EEecCCEEEEEecCCCC
Confidence            88999999999997643

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PRK02888 nitrous-oxide reductase; Validated

Probab=96.50  E-value=0.091  Score=40.31  Aligned_cols=99  Identities=8%  Similarity=-0.092  Sum_probs=65.3

Q ss_pred             cCcEEEEEecCCeEEEEEccc----c-cceehhcCCCCceEEEEEcCCCCEEEEec-CCCcEEEEeCcCCee--------
Q psy16373         53 VSNRVITGSQDHTLKVYKLED----Q-QLLFTLHGHCGPITTLFIDGVSMMSGSGS-QDGLLCVWDTVTGAC--------  118 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~----~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~v~~~d~~~~~~--------  118 (166)
                      ++++...  .++.|.+.|..+    + +.+..+. -......+.++|+|++++.++ .+.++.+.|+++.+.        
T Consensus       287 dGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~  363 (635)
T PRK02888        287 AGKFKTI--GGSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKP  363 (635)
T ss_pred             CCCEEEE--CCCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCc
Confidence            3444444  357899999987    3 3333333 345578999999998876654 588999999987543        


Q ss_pred             ----eEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCc
Q psy16373        119 ----MYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       119 ----~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~  155 (166)
                          .....-..++ ...+|+++  ...+.-.|..|..||+.+
T Consensus       364 ~~~vvaevevGlGP-LHTaFDg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        364 RDAVVAEPELGLGP-LHTAFDGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             cceEEEeeccCCCc-ceEEECCCCCEEEeEeecceeEEEehHH
Confidence                2222222223 35677773  445555699999999876

>KOG1832|consensus

Probab=96.49  E-value=0.0046  Score=48.60  Aligned_cols=88  Identities=15%  Similarity=0.226  Sum_probs=69.1

Q ss_pred             cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeec-CC-cEEE
Q psy16373         75 QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQ-DE-RLCV  150 (166)
Q Consensus        75 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~-d~-~i~~  150 (166)
                      +....+..|...-+|++|+.+.+.++.|+..|.++++++.+|.-......|.++|+.+.-+.  +.+++.+. .. ...+
T Consensus      1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaL 1171 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSAL 1171 (1516)
T ss_pred             ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHH
Confidence            44556677888899999999999999999999999999999999999999999999987765  35555443 32 4678


Q ss_pred             EECCc-ccceeee
Q psy16373        151 WDRFQ-GHLLSTI  162 (166)
Q Consensus       151 wd~~~-~~~~~~~  162 (166)
                      |++.. +.+.++|
T Consensus      1172 W~~~s~~~~~Hsf 1184 (1516)
T KOG1832|consen 1172 WDASSTGGPRHSF 1184 (1516)
T ss_pred             hccccccCccccc
Confidence            88754 4444444

>KOG4499|consensus

Probab=96.49  E-value=0.095  Score=35.24  Aligned_cols=96  Identities=15%  Similarity=0.104  Sum_probs=64.9

Q ss_pred             EEEEe--cCc-EEEEEecCCeEEEEE--cccccce-----ehhcC---CCC-ceEEEEEcCCCCEEEEecCCCcEEEEeC
Q psy16373         48 TVLEC--VSN-RVITGSQDHTLKVYK--LEDQQLL-----FTLHG---HCG-PITTLFIDGVSMMSGSGSQDGLLCVWDT  113 (166)
Q Consensus        48 ~~~~~--~~~-~l~~~~~d~~v~v~~--~~~~~~~-----~~~~~---~~~-~v~~~~~~~~~~~~~~~~~d~~v~~~d~  113 (166)
                      +.++|  +.. +.+.-+.+..|..||  ..++...     ..++.   ... ..-.+++.-+|++++++-..++|...|.
T Consensus       161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp  240 (310)
T KOG4499|consen  161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDP  240 (310)
T ss_pred             ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECC
Confidence            35666  222 345566788887787  5555322     22221   111 2235666678999999888899999999


Q ss_pred             cCCeeeEEeecccccEEEEEEcC---CeEEEee
Q psy16373        114 VTGACMYSIQAHDGCIHALTYSD---SYVISLG  143 (166)
Q Consensus       114 ~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~  143 (166)
                      .+++.+..++-....+++++|-.   +.+++.+
T Consensus       241 ~tGK~L~eiklPt~qitsccFgGkn~d~~yvT~  273 (310)
T KOG4499|consen  241 TTGKILLEIKLPTPQITSCCFGGKNLDILYVTT  273 (310)
T ss_pred             CCCcEEEEEEcCCCceEEEEecCCCccEEEEEe
Confidence            99999999988888999999975   4444433

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=96.40  E-value=0.087  Score=35.20  Aligned_cols=69  Identities=16%  Similarity=0.219  Sum_probs=51.3

Q ss_pred             ceEEEEecCcEEEEEecCCeEEEEEcccccceehh-------c-------CCCCceEEEEEcCCCCEEEEecCCCcEEEE
Q psy16373         46 PITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTL-------H-------GHCGPITTLFIDGVSMMSGSGSQDGLLCVW  111 (166)
Q Consensus        46 ~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~-------~-------~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~  111 (166)
                      ++..+...++++++-..+|.+++||+.+.+.+..-       .       .....|..+.++.+|.-+++-+ +|..+.|
T Consensus        14 ~~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y   92 (219)
T PF07569_consen   14 PVSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSY   92 (219)
T ss_pred             ceEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEe
Confidence            45556668889999999999999999987654321       1       2446688888888888887754 5788888


Q ss_pred             eCcC
Q psy16373        112 DTVT  115 (166)
Q Consensus       112 d~~~  115 (166)
                      +..-
T Consensus        93 ~~~L   96 (219)
T PF07569_consen   93 SPDL   96 (219)
T ss_pred             cccc
Confidence            7653

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=96.38  E-value=0.17  Score=34.27  Aligned_cols=119  Identities=14%  Similarity=0.113  Sum_probs=73.8

Q ss_pred             CCceEEEEe--cCcEEEEEecC--------CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEE-EecCCCcEEEEe
Q psy16373         44 HQPITVLEC--VSNRVITGSQD--------HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSG-SGSQDGLLCVWD  112 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~~~~~d--------~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d~~v~~~d  112 (166)
                      ....+.+++  +|++.++....        +.+..++.. ++... ........+.++|+|+++.+. +-+..+.|..++
T Consensus        85 ~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~-~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~  162 (246)
T PF08450_consen   85 FNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTV-VADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFD  162 (246)
T ss_dssp             TEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEE-EEEEESSEEEEEEETTSSEEEEEETTTTEEEEEE
T ss_pred             cCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEE-EecCcccccceEECCcchheeecccccceeEEEe
Confidence            456778888  66655554433        557777776 33322 222345578999999987654 667778899998


Q ss_pred             CcCC-e------eeEEeecccccEEEEEEcC-CeEEEe-ecCCcEEEEECCcccceeeeeec
Q psy16373        113 TVTG-A------CMYSIQAHDGCIHALTYSD-SYVISL-GQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       113 ~~~~-~------~~~~~~~~~~~v~~i~~~~-~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      +... .      ....+....+..-.++++. ..|+++ -..+.|.++|.. |+.+..+.++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p  223 (246)
T PF08450_consen  163 LDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELP  223 (246)
T ss_dssp             EETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-S
T ss_pred             ccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCC
Confidence            8632 1      1112222222366788876 444444 457889999987 8888888765

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG2395|consensus

Probab=96.33  E-value=0.049  Score=40.64  Aligned_cols=100  Identities=15%  Similarity=0.181  Sum_probs=67.0

Q ss_pred             cCcE-EEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCC-------EEEEecCCCcEEEEeCc-CCe-eeEEe
Q psy16373         53 VSNR-VITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSM-------MSGSGSQDGLLCVWDTV-TGA-CMYSI  122 (166)
Q Consensus        53 ~~~~-l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~~~~~~~d~~v~~~d~~-~~~-~~~~~  122 (166)
                      +.++ +.++.....++-.|++.|+.+.+.+.+.. |+-+.+.|+..       .-+.|-.|..|.-||.| .+. .+..-
T Consensus       344 dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~  422 (644)
T KOG2395|consen  344 DSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVV  422 (644)
T ss_pred             ccceEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeee
Confidence            3444 44566678899999999999988887665 66666666521       22345667889999988 222 23223


Q ss_pred             eccc----ccEEEEEEcC-CeEEEeecCCcEEEEEC
Q psy16373        123 QAHD----GCIHALTYSD-SYVISLGQDERLCVWDR  153 (166)
Q Consensus       123 ~~~~----~~v~~i~~~~-~~l~~~~~d~~i~~wd~  153 (166)
                      +.|.    ..-.|.+-.. .+|+.|+.+|.|++||.
T Consensus       423 q~kqy~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdr  458 (644)
T KOG2395|consen  423 QSKQYSTKNNFSCFATTESGYIVVGSLKGDIRLYDR  458 (644)
T ss_pred             eccccccccccceeeecCCceEEEeecCCcEEeehh
Confidence            3332    1333444443 69999999999999996

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=96.31  E-value=0.19  Score=34.40  Aligned_cols=116  Identities=19%  Similarity=0.031  Sum_probs=76.6

Q ss_pred             eEEEEe-c-CcEEEEEecC--CeEEEEEcccccceehhcC-CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373         47 ITVLEC-V-SNRVITGSQD--HTLKVYKLEDQQLLFTLHG-HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS  121 (166)
Q Consensus        47 i~~~~~-~-~~~l~~~~~d--~~v~v~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~  121 (166)
                      ...+.+ + +.++-+.+.-  ..|+.+|+.+++......- ....--.++...+ ..+...-.++...+||..+.+.+.+
T Consensus        47 TQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d-~l~qLTWk~~~~f~yd~~tl~~~~~  125 (264)
T PF05096_consen   47 TQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGD-KLYQLTWKEGTGFVYDPNTLKKIGT  125 (264)
T ss_dssp             EEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETT-EEEEEESSSSEEEEEETTTTEEEEE
T ss_pred             CccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECC-EEEEEEecCCeEEEEccccceEEEE
Confidence            457777 4 4455555554  4888999999877654332 2223345555543 3444457889999999999999888


Q ss_pred             eecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        122 IQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       122 ~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      +.- .+.=+.++...+.|+.+.....|.++|..+.+.+.++++
T Consensus       126 ~~y-~~EGWGLt~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V  167 (264)
T PF05096_consen  126 FPY-PGEGWGLTSDGKRLIMSDGSSRLYFLDPETFKEVRTIQV  167 (264)
T ss_dssp             EE--SSS--EEEECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-
T ss_pred             Eec-CCcceEEEcCCCEEEEECCccceEEECCcccceEEEEEE
Confidence            864 345577887778888888888999999999888887765

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=96.25  E-value=0.3  Score=35.96  Aligned_cols=52  Identities=12%  Similarity=0.153  Sum_probs=35.0

Q ss_pred             CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc-cccEEEEEEcC
Q psy16373         85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH-DGCIHALTYSD  136 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~-~~~v~~i~~~~  136 (166)
                      +++..++++|+++.++.-..+|.+.+.+..-.+.+..+... ......+.|..
T Consensus       217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG  269 (410)
T PF04841_consen  217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCG  269 (410)
T ss_pred             CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEEC
Confidence            35778888888888888888888888876555555555433 23445566654

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=96.24  E-value=0.25  Score=34.93  Aligned_cols=134  Identities=16%  Similarity=0.114  Sum_probs=77.9

Q ss_pred             ceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEccccc-ceehhcC-CCCceEEEEEcC
Q psy16373         17 SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQ-LLFTLHG-HCGPITTLFIDG   94 (166)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~-~~~~~~~-~~~~v~~~~~~~   94 (166)
                      |.+.++..............+.. ....++|.+++.-++.|+.+. +..+.+|++...+ ....-.. ....+.++... 
T Consensus        62 Gri~v~~i~~~~~~~~~l~~i~~-~~~~g~V~ai~~~~~~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~-  138 (321)
T PF03178_consen   62 GRILVFEISESPENNFKLKLIHS-TEVKGPVTAICSFNGRLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF-  138 (321)
T ss_dssp             EEEEEEEECSS-----EEEEEEE-EEESS-EEEEEEETTEEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE-
T ss_pred             cEEEEEEEEcccccceEEEEEEE-EeecCcceEhhhhCCEEEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc-
Confidence            66767666553111111222222 234688999999444444433 5899999998777 3322221 22356666654 


Q ss_pred             CCCEEEEecCCCcEEEEeCcC-CeeeEEee--cccccEEEEEEc-C-CeEEEeecCCcEEEEECC
Q psy16373         95 VSMMSGSGSQDGLLCVWDTVT-GACMYSIQ--AHDGCIHALTYS-D-SYVISLGQDERLCVWDRF  154 (166)
Q Consensus        95 ~~~~~~~~~~d~~v~~~d~~~-~~~~~~~~--~~~~~v~~i~~~-~-~~l~~~~~d~~i~~wd~~  154 (166)
                       +++++.|+....+.++..+. ...+..+.  .....++++.|- . +.++.+..+|.+.++...
T Consensus       139 -~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~  202 (321)
T PF03178_consen  139 -KNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN  202 (321)
T ss_dssp             -TTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred             -ccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence             56888888888888775443 22232222  234467788776 3 589999999999988775

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=96.13  E-value=0.3  Score=35.31  Aligned_cols=111  Identities=17%  Similarity=0.139  Sum_probs=72.3

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCC--CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccc--c
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC--GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDG--C  128 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~--~  128 (166)
                      .+..++.+..+|.+.-.|..+++.+.....-.  ..+..-....+|+ +..++.++.+..+|.++++.+........  .
T Consensus        67 ~dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~  145 (370)
T COG1520          67 GDGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVGGSPYY  145 (370)
T ss_pred             eCCeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecCCCeEE
Confidence            55666666888999999999888664433221  2233322333555 66678888899999989988888766541  1


Q ss_pred             EEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        129 IHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       129 v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ..........++..+.++.+...|..+|+....++.
T Consensus       146 ~~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~  181 (370)
T COG1520         146 ASPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYET  181 (370)
T ss_pred             ecCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEec
Confidence            111112224556665789999999988988776554

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=96.03  E-value=0.27  Score=33.29  Aligned_cols=106  Identities=10%  Similarity=0.057  Sum_probs=64.7

Q ss_pred             eEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC-----CCCceEEEEEcCCCCEEEEecCC--------CcEEEE
Q psy16373         47 ITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG-----HCGPITTLFIDGVSMMSGSGSQD--------GLLCVW  111 (166)
Q Consensus        47 i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~d--------~~v~~~  111 (166)
                      ...+.+  .+..++.+...+ +.++|..+++.......     .....+.+++.|+|+.+++....        |.+..+
T Consensus        42 ~~G~~~~~~~g~l~v~~~~~-~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~  120 (246)
T PF08450_consen   42 PNGMAFDRPDGRLYVADSGG-IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRI  120 (246)
T ss_dssp             EEEEEEECTTSEEEEEETTC-EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEE
T ss_pred             CceEEEEccCCEEEEEEcCc-eEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEE
Confidence            444455  456666666544 45559887744322221     34567899999999988876543        446666


Q ss_pred             eCcCCeeeEEeecccccEEEEEEcCC--eEE-EeecCCcEEEEECCc
Q psy16373        112 DTVTGACMYSIQAHDGCIHALTYSDS--YVI-SLGQDERLCVWDRFQ  155 (166)
Q Consensus       112 d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~-~~~~d~~i~~wd~~~  155 (166)
                      +.. ++...... .-...+.++|+|+  .|+ +-+..+.|..+++..
T Consensus       121 ~~~-~~~~~~~~-~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~  165 (246)
T PF08450_consen  121 DPD-GKVTVVAD-GLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDA  165 (246)
T ss_dssp             ETT-SEEEEEEE-EESSEEEEEEETTSSEEEEEETTTTEEEEEEEET
T ss_pred             CCC-CeEEEEec-CcccccceEECCcchheeecccccceeEEEeccc
Confidence            665 44333332 2345688999983  454 555678888888864

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG3617|consensus

Probab=95.88  E-value=0.027  Score=44.33  Aligned_cols=68  Identities=16%  Similarity=0.065  Sum_probs=56.0

Q ss_pred             eEEEEec--CcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373         47 ITVLECV--SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        47 i~~~~~~--~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~  114 (166)
                      +++++|.  .-.|+.|=.-|.+.+|...+.+.-.....|..+|..+.|+++|..++++..-|.+.+|...
T Consensus        62 atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   62 ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             hhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            5678883  3346777778999999998776655556799999999999999999999999999999654

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=95.77  E-value=0.38  Score=33.07  Aligned_cols=114  Identities=18%  Similarity=0.265  Sum_probs=69.7

Q ss_pred             CceEEEEecCcEEEEEecCCeEEEEEcccccceehhc--C----------CCCceEEEEEcCCCCEEEEecCCCcEEEEe
Q psy16373         45 QPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLH--G----------HCGPITTLFIDGVSMMSGSGSQDGLLCVWD  112 (166)
Q Consensus        45 ~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~--~----------~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d  112 (166)
                      ..+.+++|.++.++.|..+ ...+.|+.++....-+.  .          ...++..+... ++.++++  .|....+.|
T Consensus       139 ~~~~~i~~~~~~i~v~~~~-~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~Ll~--~~~~g~fv~  214 (275)
T PF00780_consen  139 DPPSSIAFLGNKICVGTSK-GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLS-DNEFLLC--YDNIGVFVN  214 (275)
T ss_pred             CCcEEEEEeCCEEEEEeCC-ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeC-CceEEEE--ecceEEEEc
Confidence            6788899978888887755 46778888664432221  1          11233344443 3444443  244444445


Q ss_pred             CcCCeeeE--EeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        113 TVTGACMY--SIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       113 ~~~~~~~~--~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      . .|++.+  .++ -......+++..++++..+. +.|.+|++.+++.++++..+
T Consensus       215 ~-~G~~~r~~~i~-W~~~p~~~~~~~pyli~~~~-~~iEV~~~~~~~lvQ~i~~~  266 (275)
T PF00780_consen  215 K-NGEPSRKSTIQ-WSSAPQSVAYSSPYLIAFSS-NSIEVRSLETGELVQTIPLP  266 (275)
T ss_pred             C-CCCcCcccEEE-cCCchhEEEEECCEEEEECC-CEEEEEECcCCcEEEEEECC
Confidence            4 343332  222 23456677777788877766 45999999999999998865

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG2395|consensus

Probab=95.75  E-value=0.16  Score=38.05  Aligned_cols=68  Identities=15%  Similarity=0.151  Sum_probs=52.7

Q ss_pred             CceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeC
Q psy16373         45 QPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT  113 (166)
Q Consensus        45 ~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~  113 (166)
                      ....|.+- ...+++.||.+|.|++||--..+....+.+-..+|..+..+.+|.+++.. .+..+.+-++
T Consensus       431 ~nFsc~aTT~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~T-c~tyLlLi~t  499 (644)
T KOG2395|consen  431 NNFSCFATTESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILAT-CKTYLLLIDT  499 (644)
T ss_pred             cccceeeecCCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEe-cccEEEEEEE
Confidence            34567776 78899999999999999984444445677788999999999999988654 4556666665

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=95.73  E-value=0.19  Score=37.35  Aligned_cols=106  Identities=13%  Similarity=0.204  Sum_probs=73.1

Q ss_pred             CCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCc--------------
Q psy16373         44 HQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGL--------------  107 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~--------------  107 (166)
                      .-++...++  .|.+|++... ..|.+|+-.....+..+.  ...|..+.|+|.+.+|.+-+..+.              
T Consensus        32 ~~p~~~~~~SP~G~~l~~~~~-~~V~~~~g~~~~~l~~~~--~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n  108 (561)
T COG5354          32 NWPVAYVSESPLGTYLFSEHA-AGVECWGGPSKAKLVRFR--HPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKN  108 (561)
T ss_pred             CcchhheeecCcchheehhhc-cceEEccccchhheeeee--cCCceecccCcccceeeeeccCCccChhhccCCccccC
Confidence            445666677  6667776554 568889888776655554  346889999999999988655443              


Q ss_pred             -EEEEeCcCCeeeEEeeccccc--EE-EEEEcC-C-eEEEeecCCcEEEEEC
Q psy16373        108 -LCVWDTVTGACMYSIQAHDGC--IH-ALTYSD-S-YVISLGQDERLCVWDR  153 (166)
Q Consensus       108 -v~~~d~~~~~~~~~~~~~~~~--v~-~i~~~~-~-~l~~~~~d~~i~~wd~  153 (166)
                       +.+||+.++..+..+.....+  .+ -+.|+- + +++-. ....+.++++
T Consensus       109 ~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~  159 (561)
T COG5354         109 NVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI  159 (561)
T ss_pred             ceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec
Confidence             999999999999888765554  44 566654 2 32222 3456788885

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=95.65  E-value=0.5  Score=33.56  Aligned_cols=118  Identities=16%  Similarity=0.247  Sum_probs=75.6

Q ss_pred             ccCCceEEEEe--cCcEEEEEec---CCeEEEEEccc--ccc--eehhcCCCCceEEEEEcCCCCEEEEecC-CCcEEEE
Q psy16373         42 AHHQPITVLEC--VSNRVITGSQ---DHTLKVYKLED--QQL--LFTLHGHCGPITTLFIDGVSMMSGSGSQ-DGLLCVW  111 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~~~~---d~~v~v~~~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~~v~~~  111 (166)
                      ......+-+++  +++.|.++..   +|.|..|.+..  |+.  +........+-.-+++++++++++++.. .|.|.++
T Consensus        37 ~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~  116 (346)
T COG2706          37 AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVY  116 (346)
T ss_pred             cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEE
Confidence            34455667777  5667777754   58888887765  432  2222223334478999999999988875 4789999


Q ss_pred             eCcC-CeeeE--Eeeccccc----------EEEEEEcC--CeEEEeec-CCcEEEEECCcccce
Q psy16373        112 DTVT-GACMY--SIQAHDGC----------IHALTYSD--SYVISLGQ-DERLCVWDRFQGHLL  159 (166)
Q Consensus       112 d~~~-~~~~~--~~~~~~~~----------v~~i~~~~--~~l~~~~~-d~~i~~wd~~~~~~~  159 (166)
                      -++. |....  .+..|.++          +....+.|  +++++++. --.|.+|++..|+..
T Consensus       117 p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~  180 (346)
T COG2706         117 PLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLT  180 (346)
T ss_pred             EcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccc
Confidence            8864 43222  12224443          67778888  36666654 346899999876643

>PF01011 PQQ: PQQ enzyme repeat family

Probab=95.64  E-value=0.042  Score=25.55  Aligned_cols=28  Identities=25%  Similarity=0.135  Sum_probs=22.0

Q ss_pred             eEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        138 YVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       138 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      .++.++.||.|...|.++|+.+.+++..
T Consensus         2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~~   29 (38)
T PF01011_consen    2 RVYVGTPDGYLYALDAKTGKVLWKFQTG   29 (38)
T ss_dssp             EEEEETTTSEEEEEETTTTSEEEEEESS
T ss_pred             EEEEeCCCCEEEEEECCCCCEEEeeeCC
Confidence            4566688888888888888888877654

; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=95.55  E-value=0.2  Score=37.24  Aligned_cols=57  Identities=11%  Similarity=0.089  Sum_probs=37.2

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeC
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT  113 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~  113 (166)
                      .|.+|+..+. +.|.+||+++++.++++...  +|..+.|++++.+++..+.+ .+.+++.
T Consensus       116 ~G~LL~~~~~-~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~il~~  172 (443)
T PF04053_consen  116 GGNLLGVKSS-DFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYILKY  172 (443)
T ss_dssp             -SSSEEEEET-TEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEEE
T ss_pred             cCcEEEEECC-CCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEEEEe
Confidence            3666666554 48999999999999887743  48999999999999988766 5666653

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=95.51  E-value=0.1  Score=25.02  Aligned_cols=31  Identities=13%  Similarity=0.139  Sum_probs=25.4

Q ss_pred             CceEEEEEcCC-C--CEEEEecCCCcEEEEeCcC
Q psy16373         85 GPITTLFIDGV-S--MMSGSGSQDGLLCVWDTVT  115 (166)
Q Consensus        85 ~~v~~~~~~~~-~--~~~~~~~~d~~v~~~d~~~  115 (166)
                      +.+.++.|+|. +  .+++-+-..+.+.++|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            36789999986 3  5888877889999999985

It contains a characteristic DLL sequence motif.

>KOG4441|consensus

Probab=95.33  E-value=0.74  Score=35.53  Aligned_cols=104  Identities=13%  Similarity=0.132  Sum_probs=60.1

Q ss_pred             cCcEEEEEecC------CeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCCC-----cEEEEeCcCCe--
Q psy16373         53 VSNRVITGSQD------HTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQDG-----LLCVWDTVTGA--  117 (166)
Q Consensus        53 ~~~~l~~~~~d------~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d~-----~v~~~d~~~~~--  117 (166)
                      ++...+.|+.+      .++..||..+++..  ..+..-..... ++. -++...+.|+.|+     ++..+|.++.+  
T Consensus       427 ~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g-~a~-~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~  504 (571)
T KOG4441|consen  427 GGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFG-VAV-LNGKIYVVGGFDGTSALSSVERYDPETNQWT  504 (571)
T ss_pred             CCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccce-EEE-ECCEEEEECCccCCCccceEEEEcCCCCcee
Confidence            78888888744      45667888766432  22221111112 222 2467778888776     36678877553  


Q ss_pred             eeEEeecccccEEEEEEcCCeEEEeecCC-----cEEEEECCcccc
Q psy16373        118 CMYSIQAHDGCIHALTYSDSYVISLGQDE-----RLCVWDRFQGHL  158 (166)
Q Consensus       118 ~~~~~~~~~~~v~~i~~~~~~l~~~~~d~-----~i~~wd~~~~~~  158 (166)
                      .+..+......+..........+.|+.|+     +|..||..+.+.
T Consensus       505 ~v~~m~~~rs~~g~~~~~~~ly~vGG~~~~~~l~~ve~ydp~~d~W  550 (571)
T KOG4441|consen  505 MVAPMTSPRSAVGVVVLGGKLYAVGGFDGNNNLNTVECYDPETDTW  550 (571)
T ss_pred             EcccCccccccccEEEECCEEEEEecccCccccceeEEcCCCCCce
Confidence            34334444555555555666777777764     577787766543

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=95.33  E-value=0.57  Score=32.20  Aligned_cols=111  Identities=12%  Similarity=0.024  Sum_probs=66.1

Q ss_pred             ceEEEEe--cCcEEEEEecCCeEEEEEcccccceehh--------------cCCCCceEEEE--EcCCCCEEEEecCCCc
Q psy16373         46 PITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTL--------------HGHCGPITTLF--IDGVSMMSGSGSQDGL  107 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~--------------~~~~~~v~~~~--~~~~~~~~~~~~~d~~  107 (166)
                      +|..+..  +-+.+++- .|+.+.++++..-......              ......+..++  -...+...+.......
T Consensus        37 ~I~ql~vl~~~~~llvL-sd~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~  115 (275)
T PF00780_consen   37 SITQLSVLPELNLLLVL-SDGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKK  115 (275)
T ss_pred             eEEEEEEecccCEEEEE-cCCccEEEEchhhccccccccccccccccccccccccCCeeEEeeccccccceEEEEEECCE
Confidence            4888888  33444443 3599999999765433311              11223344444  1223333333444558


Q ss_pred             EEEEeCcCC-----eeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccce
Q psy16373        108 LCVWDTVTG-----ACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus       108 v~~~d~~~~-----~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      +.+|.....     +....+.- ...+..+.|.++.++.+..+ ...+.|+.++...
T Consensus       116 i~i~~~~~~~~~f~~~~ke~~l-p~~~~~i~~~~~~i~v~~~~-~f~~idl~~~~~~  170 (275)
T PF00780_consen  116 ILIYEWNDPRNSFSKLLKEISL-PDPPSSIAFLGNKICVGTSK-GFYLIDLNTGSPS  170 (275)
T ss_pred             EEEEEEECCcccccceeEEEEc-CCCcEEEEEeCCEEEEEeCC-ceEEEecCCCCce
Confidence            888876542     34455543 56788999999888888754 4678888866554

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PHA03098 kelch-like protein; Provisional

Probab=95.04  E-value=1.1  Score=34.08  Aligned_cols=103  Identities=11%  Similarity=0.054  Sum_probs=52.1

Q ss_pred             cCcEEEEEecC------CeEEEEEccccccee--hhcCCCCceEEEEEcCCCCEEEEecCCC--------cEEEEeCcCC
Q psy16373         53 VSNRVITGSQD------HTLKVYKLEDQQLLF--TLHGHCGPITTLFIDGVSMMSGSGSQDG--------LLCVWDTVTG  116 (166)
Q Consensus        53 ~~~~l~~~~~d------~~v~v~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~d~--------~v~~~d~~~~  116 (166)
                      ++...+.|+.+      ..+..||..+.+...  .+....... +... .++..++.|+.+.        .+..||..+.
T Consensus       389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~  466 (534)
T PHA03098        389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGG-CAIY-HDGKIYVIGGISYIDNIKVYNIVESYNPVTN  466 (534)
T ss_pred             CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCc-eEEE-ECCEEEEECCccCCCCCcccceEEEecCCCC
Confidence            67777777632      457889987654322  111111111 2222 2455666665432        3788888765


Q ss_pred             ee--eEEeecccccEEEEEEcCCeEEEeecC-----CcEEEEECCccc
Q psy16373        117 AC--MYSIQAHDGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGH  157 (166)
Q Consensus       117 ~~--~~~~~~~~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~  157 (166)
                      +.  +..+.........+.+....++.|+.+     +.+.+||..+.+
T Consensus       467 ~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~  514 (534)
T PHA03098        467 KWTELSSLNFPRINASLCIFNNKIYVVGGDKYEYYINEIEVYDDKTNT  514 (534)
T ss_pred             ceeeCCCCCcccccceEEEECCEEEEEcCCcCCcccceeEEEeCCCCE
Confidence            32  222221122222333444455555543     468889887654

>smart00564 PQQ beta-propeller repeat

Probab=95.03  E-value=0.092  Score=23.25  Aligned_cols=27  Identities=30%  Similarity=0.256  Sum_probs=20.8

Q ss_pred             CCeEEEeecCCcEEEEECCcccceeee
Q psy16373        136 DSYVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       136 ~~~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      ++.++.++.++.+..+|.++|+.+.++
T Consensus         6 ~~~v~~~~~~g~l~a~d~~~G~~~W~~   32 (33)
T smart00564        6 DGTVYVGSTDGTLYALDAKTGEILWTY   32 (33)
T ss_pred             CCEEEEEcCCCEEEEEEcccCcEEEEc
Confidence            346777888888888888888877654

Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=94.74  E-value=0.25  Score=37.69  Aligned_cols=27  Identities=30%  Similarity=0.667  Sum_probs=24.5

Q ss_pred             CeEEEeecCCcEEEEECCcccceeeee
Q psy16373        137 SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       137 ~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      +++++.+.|+.+|+||+.+++++.+..
T Consensus       231 ~~l~tl~~D~~LRiW~l~t~~~~~~~~  257 (547)
T PF11715_consen  231 TFLFTLSRDHTLRIWSLETGQCLATID  257 (547)
T ss_dssp             TEEEEEETTSEEEEEETTTTCEEEEEE
T ss_pred             CEEEEEeCCCeEEEEECCCCeEEEEec
Confidence            699999999999999999999987664

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=94.58  E-value=0.44  Score=36.43  Aligned_cols=70  Identities=21%  Similarity=0.291  Sum_probs=44.4

Q ss_pred             cCcEEEEEecCCeEEEEEccc----cccee-----------hhcC-----------CCCceEEEEEcC----CCCEEEEe
Q psy16373         53 VSNRVITGSQDHTLKVYKLED----QQLLF-----------TLHG-----------HCGPITTLFIDG----VSMMSGSG  102 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~----~~~~~-----------~~~~-----------~~~~v~~~~~~~----~~~~~~~~  102 (166)
                      ++..++.+..||.+.......    +....           .+.+           ....+..++++.    +..++++.
T Consensus       157 ~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~tl  236 (547)
T PF11715_consen  157 SEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFTL  236 (547)
T ss_dssp             SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEEE
T ss_pred             CCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEEE
Confidence            677788888899888877764    11100           0110           123455566666    67888899


Q ss_pred             cCCCcEEEEeCcCCeeeEEe
Q psy16373        103 SQDGLLCVWDTVTGACMYSI  122 (166)
Q Consensus       103 ~~d~~v~~~d~~~~~~~~~~  122 (166)
                      +.|+.+++||+.++.++...
T Consensus       237 ~~D~~LRiW~l~t~~~~~~~  256 (547)
T PF11715_consen  237 SRDHTLRIWSLETGQCLATI  256 (547)
T ss_dssp             ETTSEEEEEETTTTCEEEEE
T ss_pred             eCCCeEEEEECCCCeEEEEe
Confidence            99999999999999986654

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PRK04043 tolB translocation protein TolB; Provisional

Probab=94.48  E-value=1.4  Score=32.60  Aligned_cols=110  Identities=9%  Similarity=0.011  Sum_probs=62.8

Q ss_pred             CceEEEEe--cCcEEEE-Eec--CCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec-CCC--cEEEEeCcCC
Q psy16373         45 QPITVLEC--VSNRVIT-GSQ--DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS-QDG--LLCVWDTVTG  116 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~-~~~--d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~--~v~~~d~~~~  116 (166)
                      +......|  +++.++. .+.  +..+.++|+.+++. ..+..+........|+|+|+.++-.+ ..+  .|.+.|+.++
T Consensus       233 g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g  311 (419)
T PRK04043        233 GMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSG  311 (419)
T ss_pred             CcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence            33444556  7766554 333  35677778876653 33443333334567999998766554 333  6777888777


Q ss_pred             eeeEEeecccccEEEEEEcCC--eEEEeecC---------CcEEEEECCcccc
Q psy16373        117 ACMYSIQAHDGCIHALTYSDS--YVISLGQD---------ERLCVWDRFQGHL  158 (166)
Q Consensus       117 ~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d---------~~i~~wd~~~~~~  158 (166)
                      +....... ...  ...|+|+  .++.....         ..|.+.|+.++..
T Consensus       312 ~~~rlt~~-g~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~  361 (419)
T PRK04043        312 SVEQVVFH-GKN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI  361 (419)
T ss_pred             CeEeCccC-CCc--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe
Confidence            65333221 111  2478883  44444432         3678888877653

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=94.29  E-value=1.3  Score=34.93  Aligned_cols=107  Identities=14%  Similarity=0.134  Sum_probs=70.0

Q ss_pred             ceEEEEe----cCcEEEEEecCCeEEEEEccccc--------------------ceehhcCCCCceEEEEEc--CCCCEE
Q psy16373         46 PITVLEC----VSNRVITGSQDHTLKVYKLEDQQ--------------------LLFTLHGHCGPITTLFID--GVSMMS   99 (166)
Q Consensus        46 ~i~~~~~----~~~~l~~~~~d~~v~v~~~~~~~--------------------~~~~~~~~~~~v~~~~~~--~~~~~~   99 (166)
                      .|+-|..    ..+.|+.+..||.|.+|..++--                    +-..+. -...+.+++++  ...+++
T Consensus       102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlI  180 (717)
T PF08728_consen  102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLI  180 (717)
T ss_pred             eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEE
Confidence            4666655    56779999999999999874310                    001111 23467889998  778888


Q ss_pred             EEecCCCcEEEEeCcC--Cee-eEEeecccccEEEEEEcC-----C---eEEEeecCCcEEEEEC
Q psy16373        100 GSGSQDGLLCVWDTVT--GAC-MYSIQAHDGCIHALTYSD-----S---YVISLGQDERLCVWDR  153 (166)
Q Consensus       100 ~~~~~d~~v~~~d~~~--~~~-~~~~~~~~~~v~~i~~~~-----~---~l~~~~~d~~i~~wd~  153 (166)
                      |.++....|.||-...  .+. ...-..+...|.+|.|-+     .   .+++++-.|.+-+|++
T Consensus       181 AVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  181 AVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            8888888787775432  111 111112456788888854     2   5677778999988887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>KOG4499|consensus

Probab=94.29  E-value=1.1  Score=30.43  Aligned_cols=46  Identities=13%  Similarity=0.165  Sum_probs=39.8

Q ss_pred             EEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcC
Q psy16373         49 VLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDG   94 (166)
Q Consensus        49 ~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~   94 (166)
                      ++.-+|++.++.-+.++|...|..+++.+.+++-....|++.+|-.
T Consensus       218 ~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgG  263 (310)
T KOG4499|consen  218 TIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGG  263 (310)
T ss_pred             eEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecC
Confidence            3444788888888899999999999999999998899999999953

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=94.25  E-value=1.3  Score=31.20  Aligned_cols=111  Identities=17%  Similarity=0.136  Sum_probs=68.9

Q ss_pred             CcEEEEEecCC-eEEEEEcccccceehhcCCCCce--EEEEEcCCCCEEEEec-----CCCcEEEEeCc-CCeeeEEeec
Q psy16373         54 SNRVITGSQDH-TLKVYKLEDQQLLFTLHGHCGPI--TTLFIDGVSMMSGSGS-----QDGLLCVWDTV-TGACMYSIQA  124 (166)
Q Consensus        54 ~~~l~~~~~d~-~v~v~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~-----~d~~v~~~d~~-~~~~~~~~~~  124 (166)
                      +..++.+-.-| ...+||..+++....+....+.-  ---.|+++|+++.+.-     ..|.|-|||.+ +.+.+..+..
T Consensus        17 ~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s   96 (305)
T PF07433_consen   17 PEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPS   96 (305)
T ss_pred             CeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecC
Confidence            33444554433 45578888887776655433222  1357899999998863     34789999998 5677777876


Q ss_pred             ccccEEEEEEcCC--eEEEee------------------cCCcEEEEECCcccceeeeee
Q psy16373        125 HDGCIHALTYSDS--YVISLG------------------QDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       125 ~~~~v~~i~~~~~--~l~~~~------------------~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      |.-.-..+.+.|+  .|+.+.                  .+..+..-|.++|+.+.+..+
T Consensus        97 ~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~L  156 (305)
T PF07433_consen   97 HGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVEL  156 (305)
T ss_pred             CCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeec
Confidence            6544445556552  344332                  234566667777777766544

>KOG4460|consensus

Probab=94.24  E-value=1.2  Score=33.75  Aligned_cols=75  Identities=9%  Similarity=0.094  Sum_probs=50.3

Q ss_pred             ceEEEEEcCCCCEEEEecCCCcEEEEeC---------cCCeeeEEee-----------cccccEEEEEEcCC-----eEE
Q psy16373         86 PITTLFIDGVSMMSGSGSQDGLLCVWDT---------VTGACMYSIQ-----------AHDGCIHALTYSDS-----YVI  140 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~---------~~~~~~~~~~-----------~~~~~v~~i~~~~~-----~l~  140 (166)
                      .|..+..++.|..++..+.+|.+.++=.         +.+++.-..+           ...-.+..++|+|+     ++.
T Consensus       105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~  184 (741)
T KOG4460|consen  105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV  184 (741)
T ss_pred             EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence            4667788999999999999997766532         2332211111           01113456788883     778


Q ss_pred             EeecCCcEEEEECCccccee
Q psy16373        141 SLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus       141 ~~~~d~~i~~wd~~~~~~~~  160 (166)
                      .-+.|..|++||....+.+.
T Consensus       185 iL~sdnviRiy~lS~~tely  204 (741)
T KOG4460|consen  185 LLTSDNVIRIYSLSEPTELY  204 (741)
T ss_pred             EEecCcEEEEEecCCcchhh
Confidence            88889999999998776653

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=94.04  E-value=1.4  Score=31.21  Aligned_cols=97  Identities=13%  Similarity=0.146  Sum_probs=55.2

Q ss_pred             EEEcc-cccceehhcCCCCceEEEEEcCCCCEEEEec-CCCcEEEEeCcC--Cee-----eEEeecccccEEEEEEcC-C
Q psy16373         68 VYKLE-DQQLLFTLHGHCGPITTLFIDGVSMMSGSGS-QDGLLCVWDTVT--GAC-----MYSIQAHDGCIHALTYSD-S  137 (166)
Q Consensus        68 v~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~v~~~d~~~--~~~-----~~~~~~~~~~v~~i~~~~-~  137 (166)
                      +|-+. .+...+.+..+-..-+.++|+|+++.+..+. ..+.+.-+++..  +..     ...+....+..-.++... .
T Consensus       145 lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG  224 (307)
T COG3386         145 LYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADG  224 (307)
T ss_pred             EEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCC
Confidence            34333 3444444444455568999999987666554 447788777652  111     111111223333344443 3


Q ss_pred             eEEEeecC-C-cEEEEECCcccceeeeeec
Q psy16373        138 YVISLGQD-E-RLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       138 ~l~~~~~d-~-~i~~wd~~~~~~~~~~~~~  165 (166)
                      .+.++... + .|..|+.. |+++..+.++
T Consensus       225 ~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP  253 (307)
T COG3386         225 NLWVAAVWGGGRVVRFNPD-GKLLGEIKLP  253 (307)
T ss_pred             CEEEecccCCceEEEECCC-CcEEEEEECC
Confidence            45534333 3 89999987 9999888765

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=93.89  E-value=1  Score=30.14  Aligned_cols=70  Identities=16%  Similarity=0.169  Sum_probs=44.8

Q ss_pred             ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe-------e-------cccccEEEEEEcC-CeEEEeecCCcEEE
Q psy16373         86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI-------Q-------AHDGCIHALTYSD-SYVISLGQDERLCV  150 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~-------~-------~~~~~v~~i~~~~-~~l~~~~~d~~i~~  150 (166)
                      ++..+.  ..+.+++.-+.+|.+++||+++.+.+..-       .       .....|..+..+. +..+..-.+|..+.
T Consensus        14 ~~~~l~--~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~   91 (219)
T PF07569_consen   14 PVSFLE--CNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYS   91 (219)
T ss_pred             ceEEEE--eCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEE
Confidence            344444  35677888899999999999988654322       1       2335677777765 33333334577888


Q ss_pred             EECCccc
Q psy16373        151 WDRFQGH  157 (166)
Q Consensus       151 wd~~~~~  157 (166)
                      ||..-+.
T Consensus        92 y~~~L~~   98 (219)
T PF07569_consen   92 YSPDLGC   98 (219)
T ss_pred             eccccce
Confidence            8876544

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=93.87  E-value=0.35  Score=23.23  Aligned_cols=29  Identities=14%  Similarity=0.245  Sum_probs=23.4

Q ss_pred             ccEEEEEEcC-----CeEEEeecCCcEEEEECCc
Q psy16373        127 GCIHALTYSD-----SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       127 ~~v~~i~~~~-----~~l~~~~~d~~i~~wd~~~  155 (166)
                      +.+.++.|+|     +.|+.+-.-+.+.++|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            3578899996     3777777789999999995

It contains a characteristic DLL sequence motif.

>PHA02713 hypothetical protein; Provisional

Probab=93.85  E-value=2.4  Score=32.75  Aligned_cols=101  Identities=10%  Similarity=0.060  Sum_probs=53.0

Q ss_pred             cCcEEEEEecCC-----eEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCCC-------------------
Q psy16373         53 VSNRVITGSQDH-----TLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQDG-------------------  106 (166)
Q Consensus        53 ~~~~l~~~~~d~-----~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d~-------------------  106 (166)
                      ++...+.|+.++     .+..||..+.+..  ..+...........+  ++...+.|+.++                   
T Consensus       351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~--~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~  428 (557)
T PHA02713        351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVL--DQYIYIIGGRTEHIDYTSVHHMNSIDMEEDT  428 (557)
T ss_pred             CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEE--CCEEEEEeCCCcccccccccccccccccccc
Confidence            777777787653     4788998765332  222211111122222  467777776542                   


Q ss_pred             ----cEEEEeCcCCe--eeEEeecccccEEEEEEcCCeEEEeecC------CcEEEEECCc
Q psy16373        107 ----LLCVWDTVTGA--CMYSIQAHDGCIHALTYSDSYVISLGQD------ERLCVWDRFQ  155 (166)
Q Consensus       107 ----~v~~~d~~~~~--~~~~~~~~~~~v~~i~~~~~~l~~~~~d------~~i~~wd~~~  155 (166)
                          .+..||.++.+  .+..+.........+.+.....+.|+.+      ..+..||..+
T Consensus       429 ~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~  489 (557)
T PHA02713        429 HSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNT  489 (557)
T ss_pred             cccceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCC
Confidence                46678876553  3333322222222334444555555543      2467899876

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=93.78  E-value=1.7  Score=30.80  Aligned_cols=106  Identities=15%  Similarity=0.119  Sum_probs=64.3

Q ss_pred             CceEEEEecCcEEEEEecCCeEEEEEccc-ccceehhc--CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC------
Q psy16373         45 QPITVLECVSNRVITGSQDHTLKVYKLED-QQLLFTLH--GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT------  115 (166)
Q Consensus        45 ~~i~~~~~~~~~l~~~~~d~~v~v~~~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~------  115 (166)
                      ..+.++...+++++.|.....+.++..+. ...+..+.  .....++++.+-++++.++.+..+|.+.++....      
T Consensus       130 ~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~  209 (321)
T PF03178_consen  130 FYITSLSVFKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSR  209 (321)
T ss_dssp             SSEEEEEEETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTT
T ss_pred             EEEEEEeccccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccc
Confidence            37888888788999999988999886553 22122221  1234577888875657899999999999987652      


Q ss_pred             -Ce----eeEEeecccccEEEE---EEcC-----C-----eEEEeecCCcEEEE
Q psy16373        116 -GA----CMYSIQAHDGCIHAL---TYSD-----S-----YVISLGQDERLCVW  151 (166)
Q Consensus       116 -~~----~~~~~~~~~~~v~~i---~~~~-----~-----~l~~~~~d~~i~~w  151 (166)
                       +.    ....+. ....|+++   ...|     +     .++.++.+|.|...
T Consensus       210 ~~~~~L~~~~~f~-lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l  262 (321)
T PF03178_consen  210 DGDPKLERISSFH-LGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL  262 (321)
T ss_dssp             TTTTBEEEEEEEE--SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred             cccccceeEEEEE-CCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence             11    122222 24567776   3333     1     37888888888743

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=93.65  E-value=2.2  Score=31.63  Aligned_cols=85  Identities=7%  Similarity=0.032  Sum_probs=56.5

Q ss_pred             eeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCc-eEEEEEcCCC----------------C--E
Q psy16373         40 TRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP-ITTLFIDGVS----------------M--M   98 (166)
Q Consensus        40 ~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~-v~~~~~~~~~----------------~--~   98 (166)
                      +......+.++..  .+.+.++...-|.|.++|+.++..++-.++..+. +.-+......                .  +
T Consensus       303 l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~L  382 (415)
T PF14655_consen  303 LPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFL  382 (415)
T ss_pred             eccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEE
Confidence            4444555777777  6667777777799999999999888888776543 2212211111                1  2


Q ss_pred             EEEecCCCcEEEEeCcCCeeeEEeec
Q psy16373         99 SGSGSQDGLLCVWDTVTGACMYSIQA  124 (166)
Q Consensus        99 ~~~~~~d~~v~~~d~~~~~~~~~~~~  124 (166)
                      ++=+-.-|.+-+|.++++..+..+..
T Consensus       383 vIyaprRg~lEvW~~~~g~Rv~a~~v  408 (415)
T PF14655_consen  383 VIYAPRRGILEVWSMRQGPRVAAFNV  408 (415)
T ss_pred             EEEeccCCeEEEEecCCCCEEEEEEe
Confidence            23346678899999998888877754

>KOG4441|consensus

Probab=93.63  E-value=2.7  Score=32.61  Aligned_cols=110  Identities=13%  Similarity=0.106  Sum_probs=62.8

Q ss_pred             eEEEEe-cCcEEEEEecC------CeEEEEEccccccee--hhcCCCCceEEEEEcCCCCEEEEecCCC-----cEEEEe
Q psy16373         47 ITVLEC-VSNRVITGSQD------HTLKVYKLEDQQLLF--TLHGHCGPITTLFIDGVSMMSGSGSQDG-----LLCVWD  112 (166)
Q Consensus        47 i~~~~~-~~~~l~~~~~d------~~v~v~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~d~-----~v~~~d  112 (166)
                      -.+++. ++...++|+.|      ..+..||...++...  .+...........  -+|...+.|+.||     ++-.||
T Consensus       325 ~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~--l~g~iYavGG~dg~~~l~svE~YD  402 (571)
T KOG4441|consen  325 RVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAV--LDGKLYAVGGFDGEKSLNSVECYD  402 (571)
T ss_pred             cccEEEECCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEE--ECCEEEEEeccccccccccEEEec
Confidence            344555 77888888888      456677877665332  2222221111111  1577888898886     466777


Q ss_pred             CcCC--eeeEEeecccccEEEEEEcCCeEEEeecC------CcEEEEECCcccc
Q psy16373        113 TVTG--ACMYSIQAHDGCIHALTYSDSYVISLGQD------ERLCVWDRFQGHL  158 (166)
Q Consensus       113 ~~~~--~~~~~~~~~~~~v~~i~~~~~~l~~~~~d------~~i~~wd~~~~~~  158 (166)
                      .++.  ..+..+...........+.....+.|+.+      .++..||..+++.
T Consensus       403 p~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W  456 (571)
T KOG4441|consen  403 PVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTW  456 (571)
T ss_pred             CCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCce
Confidence            7644  33443433334444455555566666644      4577888877654

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=93.44  E-value=0.29  Score=34.82  Aligned_cols=60  Identities=23%  Similarity=0.289  Sum_probs=40.7

Q ss_pred             eEEEEEcccccceehhcCCCCceEEEEEcCCCC-EEE-EecCCCcEEEEeCcCCeeeEEeecc
Q psy16373         65 TLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSM-MSG-SGSQDGLLCVWDTVTGACMYSIQAH  125 (166)
Q Consensus        65 ~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~-~~~~d~~v~~~d~~~~~~~~~~~~~  125 (166)
                      .|-++|+.+++.+.++.. ..++.++.++.+.. +|. ....++.+.+||..+++.+.++..-
T Consensus       270 eVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~l  331 (342)
T PF06433_consen  270 EVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQL  331 (342)
T ss_dssp             EEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---
T ss_pred             EEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhcc
Confidence            455667788888877763 23577899988744 443 3456899999999999999888653

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A

Probab=93.42  E-value=0.39  Score=22.39  Aligned_cols=25  Identities=16%  Similarity=0.032  Sum_probs=18.0

Q ss_pred             EEEEcCCeEEEeecCCcEEEEECCc
Q psy16373        131 ALTYSDSYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       131 ~i~~~~~~l~~~~~d~~i~~wd~~~  155 (166)
                      .++...+.++.++.|+.+..+|.++
T Consensus        16 ~~~v~~g~vyv~~~dg~l~ald~~t   40 (40)
T PF13570_consen   16 SPAVAGGRVYVGTGDGNLYALDAAT   40 (40)
T ss_dssp             --EECTSEEEEE-TTSEEEEEETT-
T ss_pred             CCEEECCEEEEEcCCCEEEEEeCCC
Confidence            3456678999999999999999764

>PHA03098 kelch-like protein; Provisional

Probab=93.20  E-value=3  Score=31.88  Aligned_cols=104  Identities=8%  Similarity=-0.048  Sum_probs=51.0

Q ss_pred             ecCcEEEEEecC-----CeEEEEEccccccee--hhcCCCCceEEEEEcCCCCEEEEecCC------CcEEEEeCcCCee
Q psy16373         52 CVSNRVITGSQD-----HTLKVYKLEDQQLLF--TLHGHCGPITTLFIDGVSMMSGSGSQD------GLLCVWDTVTGAC  118 (166)
Q Consensus        52 ~~~~~l~~~~~d-----~~v~v~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~d------~~v~~~d~~~~~~  118 (166)
                      .++..++.|+.+     ..+..||..+.+...  .+...... .+.+. -++..++.|+.+      ..+..||+.+.+.
T Consensus       341 ~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~-~~~~~-~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W  418 (534)
T PHA03098        341 FNNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYN-PCVVN-VNNLIYVIGGISKNDELLKTVECFSLNTNKW  418 (534)
T ss_pred             ECCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCcc-ceEEE-ECCEEEEECCcCCCCcccceEEEEeCCCCee
Confidence            377777777754     346678877654321  11111111 11222 245666777632      3577888876532


Q ss_pred             e--EEeecccccEEEEEEcCCeEEEeecC--------CcEEEEECCccc
Q psy16373        119 M--YSIQAHDGCIHALTYSDSYVISLGQD--------ERLCVWDRFQGH  157 (166)
Q Consensus       119 ~--~~~~~~~~~v~~i~~~~~~l~~~~~d--------~~i~~wd~~~~~  157 (166)
                      .  ..+.........+......++.|+.+        ..+.+||..+.+
T Consensus       419 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~  467 (534)
T PHA03098        419 SKGSPLPISHYGGCAIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNK  467 (534)
T ss_pred             eecCCCCccccCceEEEECCEEEEECCccCCCCCcccceEEEecCCCCc
Confidence            2  22211111222233333444555432        237888887654

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=92.79  E-value=1.6  Score=33.09  Aligned_cols=67  Identities=12%  Similarity=0.073  Sum_probs=50.6

Q ss_pred             eEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373         47 ITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        47 i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~  114 (166)
                      ..|..- ...+++.++..|.|++||--..+....+.+-...|-.+....+|.++++.+ ...+.+-|++
T Consensus       565 Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTC-k~yllL~d~~  632 (776)
T COG5167         565 FSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATC-KNYLLLTDVP  632 (776)
T ss_pred             ccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEee-cceEEEEecc
Confidence            334444 678999999999999999876665566777788899999999988876654 3466666664

>KOG3616|consensus

Probab=92.64  E-value=0.47  Score=37.51  Aligned_cols=71  Identities=13%  Similarity=0.132  Sum_probs=50.7

Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe--eeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccc
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA--CMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      ...++++.-+|.+..++.+..||++.+++.....  .+...   ..|-..+.|...-+++++.|+...-|. ++|-.
T Consensus        14 ~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~~---~~p~~nlv~tnhgl~~~tsdrr~la~~-~dgvv   86 (1636)
T KOG3616|consen   14 DEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICEE---AKPKENLVFTNHGLVTATSDRRALAWK-EDGVV   86 (1636)
T ss_pred             cceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhhh---cCCccceeeeccceEEEeccchhheee-ccCcc
Confidence            4457888889999999999999999999875433  23332   234445677777788888888887785 34433

>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length

Probab=92.61  E-value=0.41  Score=20.45  Aligned_cols=26  Identities=23%  Similarity=0.273  Sum_probs=21.6

Q ss_pred             ccEEEEEEcCCeEEEeecCCcEEEEE
Q psy16373        127 GCIHALTYSDSYVISLGQDERLCVWD  152 (166)
Q Consensus       127 ~~v~~i~~~~~~l~~~~~d~~i~~wd  152 (166)
                      +.|.+++..+++++.+...+.+|+|.
T Consensus         2 E~i~aia~g~~~vavaTS~~~lRifs   27 (27)
T PF12341_consen    2 EEIEAIAAGDSWVAVATSAGYLRIFS   27 (27)
T ss_pred             ceEEEEEccCCEEEEEeCCCeEEecC
Confidence            45788888899999999889998873

The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=92.13  E-value=2.7  Score=31.06  Aligned_cols=47  Identities=21%  Similarity=0.423  Sum_probs=36.8

Q ss_pred             cEEEEeCcCCeeeEEeecccccEEEEEEcC-CeEEEeecCCcEEEEECC
Q psy16373        107 LLCVWDTVTGACMYSIQAHDGCIHALTYSD-SYVISLGQDERLCVWDRF  154 (166)
Q Consensus       107 ~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~  154 (166)
                      .|.+|+. +|+++.++.-..+.+..+.|.. ..|+....||.+++||+.
T Consensus        62 ~I~iys~-sG~ll~~i~w~~~~iv~~~wt~~e~LvvV~~dG~v~vy~~~  109 (410)
T PF04841_consen   62 SIQIYSS-SGKLLSSIPWDSGRIVGMGWTDDEELVVVQSDGTVRVYDLF  109 (410)
T ss_pred             EEEEECC-CCCEeEEEEECCCCEEEEEECCCCeEEEEEcCCEEEEEeCC
Confidence            4788875 5666666544447899999987 588888899999999985

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=92.04  E-value=4.3  Score=31.83  Aligned_cols=66  Identities=17%  Similarity=0.357  Sum_probs=44.9

Q ss_pred             EEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee-cccccEEEEEEcC----CeEEEeecCCcEEEEEC
Q psy16373         88 TTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ-AHDGCIHALTYSD----SYVISLGQDERLCVWDR  153 (166)
Q Consensus        88 ~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~-~~~~~v~~i~~~~----~~l~~~~~d~~i~~wd~  153 (166)
                      +-+.-+.-+...+..+....+.|||.+.+....... ...+.|.++.|..    ..+++.+..+.|.+|..
T Consensus        33 ~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q  103 (631)
T PF12234_consen   33 SLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQ  103 (631)
T ss_pred             ceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEc
Confidence            334334444444444445589999999886544332 3467899999964    48888899999998854

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=91.95  E-value=3.3  Score=29.33  Aligned_cols=105  Identities=12%  Similarity=0.068  Sum_probs=54.1

Q ss_pred             CCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeC-cCCeeeE
Q psy16373         44 HQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT-VTGACMY  120 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~-~~~~~~~  120 (166)
                      .+.+..+..  ++.+++++.......-||.....-...-+.....|..+.|.|++...+.+ ..|.++.=+. ...+.-.
T Consensus       144 ~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~  222 (302)
T PF14870_consen  144 SGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWS  222 (302)
T ss_dssp             ---EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE-
T ss_pred             cceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccc
Confidence            355666666  67777777666666677765321111112235679999999998777654 7888888762 2222111


Q ss_pred             E----eecccccEEEEEEcC-CeEEEeecCCcEE
Q psy16373        121 S----IQAHDGCIHALTYSD-SYVISLGQDERLC  149 (166)
Q Consensus       121 ~----~~~~~~~v~~i~~~~-~~l~~~~~d~~i~  149 (166)
                      .    +....-.+..++|.+ +.+..++..|.+.
T Consensus       223 ~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~l~  256 (302)
T PF14870_consen  223 EPIIPIKTNGYGILDLAYRPPNEIWAVGGSGTLL  256 (302)
T ss_dssp             --B-TTSS--S-EEEEEESSSS-EEEEESTT-EE
T ss_pred             cccCCcccCceeeEEEEecCCCCEEEEeCCccEE
Confidence            1    111223578899987 5666666677553

>PHA02790 Kelch-like protein; Provisional

Probab=91.94  E-value=4.3  Score=30.71  Aligned_cols=100  Identities=7%  Similarity=-0.088  Sum_probs=53.1

Q ss_pred             cCcEEEEEecC---CeEEEEEccccccee--hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe--eeEEeecc
Q psy16373         53 VSNRVITGSQD---HTLKVYKLEDQQLLF--TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA--CMYSIQAH  125 (166)
Q Consensus        53 ~~~~l~~~~~d---~~v~v~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~--~~~~~~~~  125 (166)
                      ++...+.|+.+   ..+..||.++.+...  .+....... +++ .-++...+.|+   .+-+||.++.+  .+..+...
T Consensus       362 ~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~-~~~-~~~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~~  436 (480)
T PHA02790        362 NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKS-CAL-VFGRRLFLVGR---NAEFYCESSNTWTLIDDPIYP  436 (480)
T ss_pred             CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccc-eEE-EECCEEEEECC---ceEEecCCCCcEeEcCCCCCC
Confidence            77777777754   346778887654322  111111111 222 22456666663   46778877553  33333322


Q ss_pred             cccEEEEEEcCCeEEEeecC-----CcEEEEECCccc
Q psy16373        126 DGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGH  157 (166)
Q Consensus       126 ~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~  157 (166)
                      ......+.......+.|+.+     ..+..||..+++
T Consensus       437 r~~~~~~v~~~~IYviGG~~~~~~~~~ve~Yd~~~~~  473 (480)
T PHA02790        437 RDNPELIIVDNKLLLIGGFYRGSYIDTIEVYNNRTYS  473 (480)
T ss_pred             ccccEEEEECCEEEEECCcCCCcccceEEEEECCCCe
Confidence            33344444555566666643     457888887665

>KOG1920|consensus

Probab=91.61  E-value=2.9  Score=34.87  Aligned_cols=66  Identities=9%  Similarity=-0.047  Sum_probs=51.6

Q ss_pred             CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEE
Q psy16373         45 QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVW  111 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~  111 (166)
                      ..|.++.|  +++.++.+..+|.|.+-|.++....- ...-.+.|.+++|+|++..++..+..+++.+-
T Consensus        69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~ei-vg~vd~GI~aaswS~Dee~l~liT~~~tll~m  136 (1265)
T KOG1920|consen   69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEI-VGNVDNGISAASWSPDEELLALITGRQTLLFM  136 (1265)
T ss_pred             cceEEEEEecccceEEEEecCCcEEEEcccccceee-eeeccCceEEEeecCCCcEEEEEeCCcEEEEE
Confidence            57899999  88889999999999999887654321 11235679999999999999888877776654

>KOG3630|consensus

Probab=91.60  E-value=1.5  Score=36.32  Aligned_cols=124  Identities=10%  Similarity=-0.037  Sum_probs=72.1

Q ss_pred             EEecCCCceEEEeecccccceeeceeeeeeeecc------CCceEEEEec---CcEEEEEecCCeEEEEEcccccceehh
Q psy16373         10 LRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAH------HQPITVLECV---SNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~i~~~~~~---~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      ++..+.|..+..++...-.......  ...+..|      ..-..++.|+   ....+....|+.|++..+........-
T Consensus       117 v~~tsng~~v~~fD~~~fs~s~~~~--~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s  194 (1405)
T KOG3630|consen  117 VVSTSNGEAVYSFDLEEFSESRYET--TVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTS  194 (1405)
T ss_pred             EEEecCCceEEEEehHhhhhhhhhh--ccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhhhcc
Confidence            3444456677777765433222111  1111111      2234456663   344666778888888777544332222


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec----ccccEEEEEEcC
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA----HDGCIHALTYSD  136 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~----~~~~v~~i~~~~  136 (166)
                      -......++++|+|.|..++.|...|++.-|-.. .+....+..    ....|.++.|-.
T Consensus       195 ~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v~Wl~  253 (1405)
T KOG3630|consen  195 FPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSVTWLS  253 (1405)
T ss_pred             cCcccceeeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEEEEec
Confidence            2245678999999999999999999999888653 222222211    135788999865

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=91.56  E-value=5.3  Score=30.94  Aligned_cols=146  Identities=11%  Similarity=0.160  Sum_probs=82.5

Q ss_pred             cceEEEEecCCCceEEEeecccccc-eeeceeeeeeeeccCCceEEEEe------cCcEEEEEecCCeEEEEEccc----
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEE-MTLTCCKVESTRAHHQPITVLEC------VSNRVITGSQDHTLKVYKLED----   73 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~------~~~~l~~~~~d~~v~v~~~~~----   73 (166)
                      .++.+=+++.+|+.+.+-....... ..+..   ...-|....|..++|      +...+++.-....|.||.+..    
T Consensus        19 iHPvhGlaWTDGkqVvLT~L~l~~gE~kfGd---s~viGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e   95 (671)
T PF15390_consen   19 IHPVHGLAWTDGKQVVLTDLQLHNGEPKFGD---SKVIGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTE   95 (671)
T ss_pred             hccccceEecCCCEEEEEeeeeeCCccccCC---ccEeeccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccc
Confidence            4566667788888887766543221 11111   122355567889999      122355555678999999862    


Q ss_pred             -ccceehhcCCC-C----ceEEEEEcCCCCEEEEecCCCcEEEEeCcC--CeeeEEeecccccEEEEEEcCC--eE-EEe
Q psy16373         74 -QQLLFTLHGHC-G----PITTLFIDGVSMMSGSGSQDGLLCVWDTVT--GACMYSIQAHDGCIHALTYSDS--YV-ISL  142 (166)
Q Consensus        74 -~~~~~~~~~~~-~----~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~--~~~~~~~~~~~~~v~~i~~~~~--~l-~~~  142 (166)
                       ++.+..-..+- .    --....|+|....++.-.....-.+++++.  .+....++ ..+-|.+.+|.++  .| +..
T Consensus        96 ~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~-~~G~IhCACWT~DG~RLVVAv  174 (671)
T PF15390_consen   96 RNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIK-TSGLIHCACWTKDGQRLVVAV  174 (671)
T ss_pred             cccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEecc-CCceEEEEEecCcCCEEEEEe
Confidence             23222211111 1    124567899877776655544445566652  33334454 4678999999873  33 333


Q ss_pred             ecCCcEEEEECC
Q psy16373        143 GQDERLCVWDRF  154 (166)
Q Consensus       143 ~~d~~i~~wd~~  154 (166)
                      +..=.-++||-.
T Consensus       175 GSsLHSyiWd~~  186 (671)
T PF15390_consen  175 GSSLHSYIWDSA  186 (671)
T ss_pred             CCeEEEEEecCc
Confidence            434456888853

>PRK02888 nitrous-oxide reductase; Validated

Probab=91.55  E-value=3.7  Score=32.08  Aligned_cols=52  Identities=15%  Similarity=0.014  Sum_probs=34.3

Q ss_pred             CcEEEEeCcC-----CeeeEEeecccccEEEEEEcCC--e-EEEeecCCcEEEEECCcccc
Q psy16373        106 GLLCVWDTVT-----GACMYSIQAHDGCIHALTYSDS--Y-VISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus       106 ~~v~~~d~~~-----~~~~~~~~~~~~~v~~i~~~~~--~-l~~~~~d~~i~~wd~~~~~~  158 (166)
                      +.|.+.|.++     .+.+..+.. ......+.++|+  + ++++..+.++.+.|+.+.+.
T Consensus       296 n~V~VID~~t~~~~~~~v~~yIPV-GKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~  355 (635)
T PRK02888        296 SKVPVVDGRKAANAGSALTRYVPV-PKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDD  355 (635)
T ss_pred             CEEEEEECCccccCCcceEEEEEC-CCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhh
Confidence            4577778776     334444433 345567889984  4 44555589999999987653

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=91.27  E-value=2.7  Score=28.08  Aligned_cols=115  Identities=17%  Similarity=0.053  Sum_probs=69.7

Q ss_pred             EEEe-cCcEEEEEec--CCeEEEEEcccccceehhcCCCCceEEEEEcCCCC-EEEEecCCCcEEEEeCcCCeeeEEeec
Q psy16373         49 VLEC-VSNRVITGSQ--DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSM-MSGSGSQDGLLCVWDTVTGACMYSIQA  124 (166)
Q Consensus        49 ~~~~-~~~~l~~~~~--d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~v~~~d~~~~~~~~~~~~  124 (166)
                      .+.. ++.++.+.+.  ...|++||+.+++.+..-.-....+..--...-+. .....-.+|....+|.++.+.+..+.-
T Consensus        50 GL~~~~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y  129 (262)
T COG3823          50 GLEYLDGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSY  129 (262)
T ss_pred             ceeeeCCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhccccc
Confidence            4555 5655666553  46899999998876644321111111111111122 223345788888999988888777653


Q ss_pred             ccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        125 HDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       125 ~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                       ++.-+.++-....++.+.....++.-|.++...+.++++
T Consensus       130 -~GeGWgLt~d~~~LimsdGsatL~frdP~tfa~~~~v~V  168 (262)
T COG3823         130 -EGEGWGLTSDDKNLIMSDGSATLQFRDPKTFAELDTVQV  168 (262)
T ss_pred             -CCcceeeecCCcceEeeCCceEEEecCHHHhhhcceEEE
Confidence             445567777776677777777788778777666665543

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=90.62  E-value=2.7  Score=25.84  Aligned_cols=104  Identities=12%  Similarity=0.088  Sum_probs=64.6

Q ss_pred             EEEEEecCCeEEEEEcccccc--------eehhcCCCCceEEEEEcC-----CCCEEEEecCCCcEEEEeCcCCeeeEEe
Q psy16373         56 RVITGSQDHTLKVYKLEDQQL--------LFTLHGHCGPITTLFIDG-----VSMMSGSGSQDGLLCVWDTVTGACMYSI  122 (166)
Q Consensus        56 ~l~~~~~d~~v~v~~~~~~~~--------~~~~~~~~~~v~~~~~~~-----~~~~~~~~~~d~~v~~~d~~~~~~~~~~  122 (166)
                      .|++++.-++|.+++......        +..+. ....|++++-.+     +...++.|+ ...+..||+.+..-+..-
T Consensus        12 cL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~~N~d~Fyk   89 (136)
T PF14781_consen   12 CLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVENNSDLFYK   89 (136)
T ss_pred             eEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEcccCchhhhh
Confidence            467777889999998864432        12222 345677775433     255666665 557889999877655433


Q ss_pred             ecccccEEEEEEc-----CCeEEEeecCCcEEEEECCcccceeee
Q psy16373        123 QAHDGCIHALTYS-----DSYVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       123 ~~~~~~v~~i~~~-----~~~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      . -...|+++.+-     +.-++..+.+..|.-||..-.+..++.
T Consensus        90 e-~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWtV  133 (136)
T PF14781_consen   90 E-VPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWTV  133 (136)
T ss_pred             h-CccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEEe
Confidence            3 34667777763     345555666788888887655555544

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=90.36  E-value=3.9  Score=32.91  Aligned_cols=68  Identities=16%  Similarity=0.148  Sum_probs=48.9

Q ss_pred             CCEEEEecCCCcEEEEeCcCCeeeEEeeccccc--------EEEEEE------------------cCCeEEEeecCCcEE
Q psy16373         96 SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGC--------IHALTY------------------SDSYVISLGQDERLC  149 (166)
Q Consensus        96 ~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~--------v~~i~~------------------~~~~l~~~~~d~~i~  149 (166)
                      +..+..++.++.+.-.|.++++.+..+......        +..+.+                  +.+.++.++.|+.|.
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            456667778889999999999888877532210        111222                  224888899999999


Q ss_pred             EEECCcccceeeee
Q psy16373        150 VWDRFQGHLLSTIQ  163 (166)
Q Consensus       150 ~wd~~~~~~~~~~~  163 (166)
                      -.|.++|+.+..+.
T Consensus       274 ALDA~TGk~~W~fg  287 (764)
T TIGR03074       274 ALDADTGKLCEDFG  287 (764)
T ss_pred             EEECCCCCEEEEec
Confidence            99999999987664

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PHA02790 Kelch-like protein; Provisional

Probab=90.36  E-value=6.4  Score=29.82  Aligned_cols=101  Identities=8%  Similarity=-0.069  Sum_probs=49.2

Q ss_pred             ecCcEEEEEecC--CeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCCC---cEEEEeCcCCeee--EEe
Q psy16373         52 CVSNRVITGSQD--HTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQDG---LLCVWDTVTGACM--YSI  122 (166)
Q Consensus        52 ~~~~~l~~~~~d--~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d~---~v~~~d~~~~~~~--~~~  122 (166)
                      .++...+.|+.+  ..+..||..+++..  ..+...........  -++...+.|+.++   .+..||.++....  ..+
T Consensus       317 ~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~--~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m  394 (480)
T PHA02790        317 ANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVAS--INNVIYVIGGHSETDTTTEYLLPNHDQWQFGPST  394 (480)
T ss_pred             ECCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEE--ECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCC
Confidence            377777777753  45778887654322  22221111111222  2467777777554   4667887655322  122


Q ss_pred             ecccccEEEEEEcCCeEEEeecCCcEEEEECCccc
Q psy16373        123 QAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       123 ~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      .........+.+. +.|+..+  |...+||.++.+
T Consensus       395 ~~~r~~~~~~~~~-~~IYv~G--G~~e~ydp~~~~  426 (480)
T PHA02790        395 YYPHYKSCALVFG-RRLFLVG--RNAEFYCESSNT  426 (480)
T ss_pred             CCccccceEEEEC-CEEEEEC--CceEEecCCCCc
Confidence            2112222223333 3443333  345677776554

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=89.77  E-value=4.9  Score=27.58  Aligned_cols=152  Identities=11%  Similarity=0.094  Sum_probs=78.6

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEe-cCCeEEEEEccccc------ce
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGS-QDHTLKVYKLEDQQ------LL   77 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~-~d~~v~v~~~~~~~------~~   77 (166)
                      ++.+++.....+.+...+.+  .. .   .....+.+ .+..-.+++ .++.++..+ .++.+.++++....      ..
T Consensus        33 ~~tLfaV~d~~~~i~els~~--G~-v---lr~i~l~g-~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~  105 (248)
T PF06977_consen   33 TGTLFAVQDEPGEIYELSLD--GK-V---LRRIPLDG-FGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTSLDRADV  105 (248)
T ss_dssp             TTEEEEEETTTTEEEEEETT-----E---EEEEE-SS--SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT--EEEE
T ss_pred             CCeEEEEECCCCEEEEEcCC--CC-E---EEEEeCCC-CCCceeEEEECCCEEEEEEcCCCcEEEEEEeccccccchhhc
Confidence            35566666666666544432  11 1   11122333 345677888 445555444 58999999884321      11


Q ss_pred             ehhc-----CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC---CeeeEE--eec------ccccEEEEEEcC---Ce
Q psy16373         78 FTLH-----GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT---GACMYS--IQA------HDGCIHALTYSD---SY  138 (166)
Q Consensus        78 ~~~~-----~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~---~~~~~~--~~~------~~~~v~~i~~~~---~~  138 (166)
                      ..+.     .+....-.++|++..+.+..+-+..-..++.++.   ...+..  ...      ....+.++.++|   ..
T Consensus       106 ~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~l  185 (248)
T PF06977_consen  106 QKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHL  185 (248)
T ss_dssp             EEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEE
T ss_pred             eEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEcCCCCeE
Confidence            1111     2345588999999877777776666666666553   222111  111      223577889998   26


Q ss_pred             EEEeecCCcEEEEECCcccceeeeeec
Q psy16373        139 VISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       139 l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      ++.+..+..|..+| .+|+.+..+.+.
T Consensus       186 liLS~es~~l~~~d-~~G~~~~~~~L~  211 (248)
T PF06977_consen  186 LILSDESRLLLELD-RQGRVVSSLSLD  211 (248)
T ss_dssp             EEEETTTTEEEEE--TT--EEEEEE-S
T ss_pred             EEEECCCCeEEEEC-CCCCEEEEEEeC
Confidence            66666788888999 678887776653

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG3630|consensus

Probab=89.67  E-value=4.7  Score=33.73  Aligned_cols=96  Identities=15%  Similarity=0.027  Sum_probs=62.0

Q ss_pred             EEEEecCCeEEEEEccccccee-----hhc------CCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCee-eEEee
Q psy16373         57 VITGSQDHTLKVYKLEDQQLLF-----TLH------GHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGAC-MYSIQ  123 (166)
Q Consensus        57 l~~~~~d~~v~v~~~~~~~~~~-----~~~------~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~-~~~~~  123 (166)
                      ++..+++-.|..||+++-..-.     .+.      .......++.|+|. ....+.+..|+.|++..+..... +.++ 
T Consensus       117 v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~-  195 (1405)
T KOG3630|consen  117 VVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSF-  195 (1405)
T ss_pred             EEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhhhccc-
Confidence            3444556688899997642211     111      12234567888887 55667778899998887653322 2222 


Q ss_pred             cccccEEEEEEcC--CeEEEeecCCcEEEEEC
Q psy16373        124 AHDGCIHALTYSD--SYVISLGQDERLCVWDR  153 (166)
Q Consensus       124 ~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~  153 (166)
                      ......++++|+|  ..++.|-..|++.-|-.
T Consensus       196 p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P  227 (1405)
T KOG3630|consen  196 PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP  227 (1405)
T ss_pred             CcccceeeEEeccccceeeEecCCCeEEEeec
Confidence            2356789999999  47888888888887764

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=89.47  E-value=5.8  Score=28.04  Aligned_cols=109  Identities=12%  Similarity=0.075  Sum_probs=70.3

Q ss_pred             eEEEEecCcEEEEEecCCeEEEEEcccccceehhcC--CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee---eEE
Q psy16373         47 ITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHG--HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC---MYS  121 (166)
Q Consensus        47 i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~---~~~  121 (166)
                      +..+.+.+++...+..+.-+++.|+.+-..-..+..  -.+--.++..  .|++...+..|--+.+.|+.+...   ...
T Consensus        89 ~~Dv~vse~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddgfLivdvsdpssP~lagr  166 (370)
T COG5276          89 FADVRVSEEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSSPQLAGR  166 (370)
T ss_pred             hheeEecccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCcEEEEECCCCCCceeeee
Confidence            445555788888888999999999986533222111  1122234444  466776666555566788865432   223


Q ss_pred             eecccccEEEEEEcCCeEEEeecCCcEEEEECCccc
Q psy16373        122 IQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       122 ~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      +......-..++.+.++-+.+..|+-+.+-|+.+..
T Consensus       167 ya~~~~d~~~v~ISGn~AYvA~~d~GL~ivDVSnp~  202 (370)
T COG5276         167 YALPGGDTHDVAISGNYAYVAWRDGGLTIVDVSNPH  202 (370)
T ss_pred             eccCCCCceeEEEecCeEEEEEeCCCeEEEEccCCC
Confidence            333344446788888988889999999999997754

>KOG2247|consensus

Probab=88.75  E-value=0.13  Score=38.15  Aligned_cols=104  Identities=12%  Similarity=0.120  Sum_probs=71.6

Q ss_pred             CceEEEEe--cCcE-EEEEecCCeEEEEEcccccceehhc-CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373         45 QPITVLEC--VSNR-VITGSQDHTLKVYKLEDQQLLFTLH-GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY  120 (166)
Q Consensus        45 ~~i~~~~~--~~~~-l~~~~~d~~v~v~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~  120 (166)
                      +....++|  +++. ++.+-..+.+.+||+.+... .++. +....-.-+.|++....++.+...|.+.+++..+.+.+.
T Consensus        75 g~aldm~wDkegdvlavlAek~~piylwd~n~eyt-qqLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~ii  153 (615)
T KOG2247|consen   75 GKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYT-QQLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRII  153 (615)
T ss_pred             hhHhhhhhccccchhhhhhhcCCCeeechhhhhhH-HHHhccCcchHHHHhhccCCccccccccccceEEEeccchhhhh
Confidence            34456666  4444 45566789999999976432 1222 111122226788888888888889999999988877666


Q ss_pred             EeecccccEEEEEEcC-CeEEEeecCCcEE
Q psy16373        121 SIQAHDGCIHALTYSD-SYVISLGQDERLC  149 (166)
Q Consensus       121 ~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~  149 (166)
                      ..-.|...++.+++.+ ++.+.++.|..+.
T Consensus       154 v~Gkh~RRgtq~av~lEd~vil~dcd~~L~  183 (615)
T KOG2247|consen  154 VMGKHQRRGTQIAVTLEDYVILCDCDNTLS  183 (615)
T ss_pred             hhcccccceeEEEecccceeeecCcHHHHH
Confidence            6655888899999987 7777777775543

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=88.25  E-value=7.3  Score=27.63  Aligned_cols=139  Identities=12%  Similarity=0.075  Sum_probs=69.4

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEc-cccc----ce
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKL-EDQQ----LL   77 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~-~~~~----~~   77 (166)
                      +..+.+++.++.+....-|+.-...      ...+ -..-...|..|.| ....|......|.++.=+. ...+    .+
T Consensus       153 ~~dG~~vavs~~G~~~~s~~~G~~~------w~~~-~r~~~~riq~~gf~~~~~lw~~~~Gg~~~~s~~~~~~~~w~~~~  225 (302)
T PF14870_consen  153 SSDGRYVAVSSRGNFYSSWDPGQTT------WQPH-NRNSSRRIQSMGFSPDGNLWMLARGGQIQFSDDPDDGETWSEPI  225 (302)
T ss_dssp             -TTS-EEEEETTSSEEEEE-TT-SS-------EEE-E--SSS-EEEEEE-TTS-EEEEETTTEEEEEE-TTEEEEE---B
T ss_pred             CCCCcEEEEECcccEEEEecCCCcc------ceEE-ccCccceehhceecCCCCEEEEeCCcEEEEccCCCCcccccccc
Confidence            4456677777888777666643211      1111 1123567999999 4445555568888887762 2221    11


Q ss_pred             ehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee---cccccEEEEEEc-CCeEEEeecCCcEEEE
Q psy16373         78 FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ---AHDGCIHALTYS-DSYVISLGQDERLCVW  151 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~---~~~~~v~~i~~~-~~~l~~~~~d~~i~~w  151 (166)
                      ..+..-...+.++++.++...+++|+.. .+ +.....++.-....   .-.+....+.|. ++.-+..+.+|.|.-|
T Consensus       226 ~~~~~~~~~~ld~a~~~~~~~wa~gg~G-~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~lG~~G~ll~~  301 (302)
T PF14870_consen  226 IPIKTNGYGILDLAYRPPNEIWAVGGSG-TL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVLGQDGVLLRY  301 (302)
T ss_dssp             -TTSS--S-EEEEEESSSS-EEEEESTT--E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE-STTEEEEE
T ss_pred             CCcccCceeeEEEEecCCCCEEEEeCCc-cE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEEECCCcEEEEe
Confidence            2222233457899999988888876544 33 23333444333222   224467788885 4677777888887655

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=88.03  E-value=8.6  Score=28.17  Aligned_cols=105  Identities=14%  Similarity=0.110  Sum_probs=71.9

Q ss_pred             cCc-EEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecC---CCcEEEEeCcCCeeeEEeeccccc
Q psy16373         53 VSN-RVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQ---DGLLCVWDTVTGACMYSIQAHDGC  128 (166)
Q Consensus        53 ~~~-~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---d~~v~~~d~~~~~~~~~~~~~~~~  128 (166)
                      .+. ..+....+..|.+.|..+.+.......-. ....+++++++..+..+..   ++++.+.|..+.+.......-..+
T Consensus        84 ~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P  162 (381)
T COG3391          84 AGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP  162 (381)
T ss_pred             CCCeEEEecCCCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc
Confidence            444 45555557899999977666655443222 5678899999766655544   689999999888888775443345


Q ss_pred             EEEEEEcC--CeEEEee-cCCcEEEEECCcccce
Q psy16373        129 IHALTYSD--SYVISLG-QDERLCVWDRFQGHLL  159 (166)
Q Consensus       129 v~~i~~~~--~~l~~~~-~d~~i~~wd~~~~~~~  159 (166)
                       ..++++|  ..++.+. .++.|.+.|.......
T Consensus       163 -~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~  195 (381)
T COG3391         163 -TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVV  195 (381)
T ss_pred             -ceEEECCCCCeEEEEecCCCeEEEEeCCCccee
Confidence             7889988  3455444 6888999997655443

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=87.88  E-value=7.4  Score=27.28  Aligned_cols=95  Identities=19%  Similarity=0.182  Sum_probs=59.9

Q ss_pred             cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec------CCCcEEEEeCcCCeeeEEeec-----ccccEE
Q psy16373         62 QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS------QDGLLCVWDTVTGACMYSIQA-----HDGCIH  130 (166)
Q Consensus        62 ~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~------~d~~v~~~d~~~~~~~~~~~~-----~~~~v~  130 (166)
                      ....|++||..+.+....-.+-.+.|+++.|..+.+.++.|.      ....+..||..+.... .+..     -.++|.
T Consensus        14 ~C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~-~~~~~~s~~ipgpv~   92 (281)
T PF12768_consen   14 PCPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWS-SLGGGSSNSIPGPVT   92 (281)
T ss_pred             CCCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeee-ecCCcccccCCCcEE
Confidence            357899999987766554445667899999986667777663      3457888998766432 2222     246788


Q ss_pred             EEEEcC---C-eEEEee---cCCcEEEEECCccc
Q psy16373        131 ALTYSD---S-YVISLG---QDERLCVWDRFQGH  157 (166)
Q Consensus       131 ~i~~~~---~-~l~~~~---~d~~i~~wd~~~~~  157 (166)
                      .+.+..   + ..+.|.   .+..|..||-.+..
T Consensus        93 a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~  126 (281)
T PF12768_consen   93 ALTFISNDGSNFWVAGRSANGSTFLMKYDGSSWS  126 (281)
T ss_pred             EEEeeccCCceEEEeceecCCCceEEEEcCCceE
Confidence            887743   3 333333   23457777655443

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=87.75  E-value=2.8  Score=30.23  Aligned_cols=54  Identities=13%  Similarity=0.012  Sum_probs=39.1

Q ss_pred             CCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee
Q psy16373         63 DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC  118 (166)
Q Consensus        63 d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~  118 (166)
                      .+...++|+.+++....... ...+....|+|+++.++-.. ++.+.+.+..++..
T Consensus        22 ~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~   75 (353)
T PF00930_consen   22 KGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQE   75 (353)
T ss_dssp             EEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEE
T ss_pred             ceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEe-cCceEEEECCCCCe
Confidence            46788999998755433332 56788999999999988764 67899998877643

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=87.61  E-value=6.5  Score=26.30  Aligned_cols=47  Identities=19%  Similarity=0.261  Sum_probs=35.8

Q ss_pred             cEEEEEecCCeEEEEEccc--ccceehhcCCCCceEEEEEcCCCCEEEEe
Q psy16373         55 NRVITGSQDHTLKVYKLED--QQLLFTLHGHCGPITTLFIDGVSMMSGSG  102 (166)
Q Consensus        55 ~~l~~~~~d~~v~v~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  102 (166)
                      +.|+.+.....|.+|++..  .+.+..+. .-+.|..+.++..|++++|-
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTl   77 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFS-TVGRVLQLVYSEAGDYLVTL   77 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEc-chhheeEEEeccccceEEEE
Confidence            6665556778899999983  34455555 34789999999999999986

>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)

Probab=86.96  E-value=6.2  Score=27.89  Aligned_cols=67  Identities=13%  Similarity=0.238  Sum_probs=46.4

Q ss_pred             eEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeeccccc---EEE--EEEc--CCeEEEeecCCcEEEEEC
Q psy16373         87 ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGC---IHA--LTYS--DSYVISLGQDERLCVWDR  153 (166)
Q Consensus        87 v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~---v~~--i~~~--~~~l~~~~~d~~i~~wd~  153 (166)
                      ++++...++|.+|++.-.-..|.+.|.++++.+..+.+....   ...  .++-  +.++-....++.|.++|=
T Consensus       146 iNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN  219 (299)
T PF14269_consen  146 INSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDN  219 (299)
T ss_pred             eeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcC
Confidence            678888888999999888889999999999998888664221   111  2221  234434456777888775

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=86.82  E-value=11  Score=28.12  Aligned_cols=145  Identities=14%  Similarity=0.068  Sum_probs=78.4

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe------cCcEEEEEecCCeEEEEEcccc--c-
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC------VSNRVITGSQDHTLKVYKLEDQ--Q-   75 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~l~~~~~d~~v~v~~~~~~--~-   75 (166)
                      .....++.|+..|.++++.....+.........   ..-..||..+..      .+...++.=.-..+.+|.+...  . 
T Consensus        35 ~~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE---~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~  111 (418)
T PF14727_consen   35 SGSDKIIVGSYSGILRIYDPSGNEFQPEDLLLE---TQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTV  111 (418)
T ss_pred             CCccEEEEeccccEEEEEccCCCCCCCccEEEE---EecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCc
Confidence            355688999999999999885433221111111   123467888876      1222233344567777777321  1 


Q ss_pred             ------ceehhcCCC--CceEEEEEcC----C-CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEE
Q psy16373         76 ------LLFTLHGHC--GPITTLFIDG----V-SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVI  140 (166)
Q Consensus        76 ------~~~~~~~~~--~~v~~~~~~~----~-~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~  140 (166)
                            .+..+..|.  .....+++-|    . ..++..-+.||.+.+++-+.-.....+.. ---...+.+.+  +.++
T Consensus       112 ~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfv  190 (418)
T PF14727_consen  112 EHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFV  190 (418)
T ss_pred             ccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEE
Confidence                  111122222  1223344322    1 36777789999999998654432232322 11112355555  6788


Q ss_pred             EeecCCcEEEEEC
Q psy16373        141 SLGQDERLCVWDR  153 (166)
Q Consensus       141 ~~~~d~~i~~wd~  153 (166)
                      +++.+..+..|..
T Consensus       191 t~sss~~l~~Yky  203 (418)
T PF14727_consen  191 TASSSWTLECYKY  203 (418)
T ss_pred             EecCceeEEEecH
Confidence            8888777777754

>PRK13616 lipoprotein LpqB; Provisional

Probab=86.73  E-value=14  Score=29.06  Aligned_cols=100  Identities=12%  Similarity=-0.048  Sum_probs=51.3

Q ss_pred             ceEEEEe--cCcEEEEEe------cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC------------
Q psy16373         46 PITVLEC--VSNRVITGS------QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD------------  105 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~~~------~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d------------  105 (166)
                      .+...+.  +++.++...      .|..-.+|-...+.....+.. ....+.-.|+|++..+.+....            
T Consensus       351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~-g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~  429 (591)
T PRK13616        351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLE-GHSLTRPSWSLDADAVWVVVDGNTVVRVIRDPAT  429 (591)
T ss_pred             CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeec-CCCCCCceECCCCCceEEEecCcceEEEeccCCC
Confidence            4455555  777766554      244444444332222222221 2237788999997766665422            


Q ss_pred             CcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEeecCCcEEE
Q psy16373        106 GLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCV  150 (166)
Q Consensus       106 ~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~  150 (166)
                      +.+.+.++..++...   .....|..+.|+|+  .++... ++.|.+
T Consensus       430 gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~V  472 (591)
T PRK13616        430 GQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYL  472 (591)
T ss_pred             ceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence            223333333332222   22457999999994  444333 466665

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=86.54  E-value=9.6  Score=28.02  Aligned_cols=73  Identities=12%  Similarity=-0.083  Sum_probs=31.2

Q ss_pred             EEcCCCCEEEEe-cCCC--cEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373         91 FIDGVSMMSGSG-SQDG--LLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus        91 ~~~~~~~~~~~~-~~d~--~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      +|.++|+.++-+ ..||  .+.+.|+.+++..+--.+..........++  +.++-...+..|.--|+++.+.-..+.
T Consensus        42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~  119 (386)
T PF14583_consen   42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYE  119 (386)
T ss_dssp             -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE
T ss_pred             CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEE
Confidence            456677555444 3454  566667877765543332112111233344  344333344567777877766543333

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=86.28  E-value=12  Score=28.01  Aligned_cols=103  Identities=14%  Similarity=0.079  Sum_probs=54.0

Q ss_pred             cCcEEEE-EecCCeEE--EEEcccccceehhcCCCCceEEEEEcCCCCEEEEec-CCC--cEEEEeCcCCeeeEEeeccc
Q psy16373         53 VSNRVIT-GSQDHTLK--VYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS-QDG--LLCVWDTVTGACMYSIQAHD  126 (166)
Q Consensus        53 ~~~~l~~-~~~d~~v~--v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~--~v~~~d~~~~~~~~~~~~~~  126 (166)
                      +++.|+. ...|+...  +.|+..... ..+....+.-..-.|+|+|+.++-.+ ..|  .|.+.|...+.. ..+....
T Consensus       248 DG~~l~f~~~rdg~~~iy~~dl~~~~~-~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~  325 (425)
T COG0823         248 DGSKLAFSSSRDGSPDIYLMDLDGKNL-PRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSG  325 (425)
T ss_pred             CCCEEEEEECCCCCccEEEEcCCCCcc-eecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccC
Confidence            5666554 44555544  556665542 33443333333667899988876554 445  455556655543 3332222


Q ss_pred             ccEEEEEEcC--CeEEEeec-CCc--EEEEECCccc
Q psy16373        127 GCIHALTYSD--SYVISLGQ-DER--LCVWDRFQGH  157 (166)
Q Consensus       127 ~~v~~i~~~~--~~l~~~~~-d~~--i~~wd~~~~~  157 (166)
                      ..-..-.|+|  ++++..+. +|.  |.+.|+.++.
T Consensus       326 ~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~  361 (425)
T COG0823         326 GGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGG  361 (425)
T ss_pred             CCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCC
Confidence            2222566677  35555543 343  6666665554

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=86.15  E-value=10  Score=27.02  Aligned_cols=92  Identities=9%  Similarity=0.075  Sum_probs=62.1

Q ss_pred             CCceEEEEe--cCcEEEEEec-CCeEEEEEccc--ccc-----eehhcCCCCceEEEEEcCCCCEEEEecCCC-cEEEEe
Q psy16373         44 HQPITVLEC--VSNRVITGSQ-DHTLKVYKLED--QQL-----LFTLHGHCGPITTLFIDGVSMMSGSGSQDG-LLCVWD  112 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~~~~~-d~~v~v~~~~~--~~~-----~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~-~v~~~d  112 (166)
                      -..-+.++|  +++.++.+.. .+.+.-+++..  +..     ...+....+..-.++...+|++.+++-.+| .|..|+
T Consensus       162 ~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~  241 (307)
T COG3386         162 LTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFN  241 (307)
T ss_pred             EEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEEC
Confidence            344567888  6666666554 47788777752  211     111222345566788888888886555554 899999


Q ss_pred             CcCCeeeEEeecccccEEEEEEcC
Q psy16373        113 TVTGACMYSIQAHDGCIHALTYSD  136 (166)
Q Consensus       113 ~~~~~~~~~~~~~~~~v~~i~~~~  136 (166)
                      .. ++++..+......+++++|-.
T Consensus       242 pd-G~l~~~i~lP~~~~t~~~FgG  264 (307)
T COG3386         242 PD-GKLLGEIKLPVKRPTNPAFGG  264 (307)
T ss_pred             CC-CcEEEEEECCCCCCccceEeC
Confidence            87 999888887767888999965

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=85.67  E-value=12  Score=27.51  Aligned_cols=82  Identities=12%  Similarity=-0.040  Sum_probs=39.3

Q ss_pred             cCcEEEEEec---CCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccE
Q psy16373         53 VSNRVITGSQ---DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCI  129 (166)
Q Consensus        53 ~~~~l~~~~~---d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v  129 (166)
                      +|+.|+.++.   ...+.+.|+.+++..+--.+.........++|+.+.++-...+..+.-.|+++.+....+.....-+
T Consensus        46 dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~  125 (386)
T PF14583_consen   46 DGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVPDDWK  125 (386)
T ss_dssp             TS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--TTEE
T ss_pred             CCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECCcccc
Confidence            5666555554   4566677888877655433322223345566776766544455688888998886544444444433


Q ss_pred             EEEEE
Q psy16373        130 HALTY  134 (166)
Q Consensus       130 ~~i~~  134 (166)
                      -...|
T Consensus       126 g~gt~  130 (386)
T PF14583_consen  126 GYGTW  130 (386)
T ss_dssp             EEEEE
T ss_pred             cccce
Confidence            33333

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=85.32  E-value=5.2  Score=29.85  Aligned_cols=91  Identities=13%  Similarity=0.073  Sum_probs=52.5

Q ss_pred             CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEe-cCCC--cEEEEeCcCCeeeEEeecccccEEEEEEcCC---
Q psy16373         64 HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSG-SQDG--LLCVWDTVTGACMYSIQAHDGCIHALTYSDS---  137 (166)
Q Consensus        64 ~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~d~--~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~---  137 (166)
                      ..+.++++.+++...... ..+.-...+|+|+|+.++-+ ..||  .+.+.|+..+... .+....+.-+.-.|+|+   
T Consensus       218 ~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~-~Lt~~~gi~~~Ps~spdG~~  295 (425)
T COG0823         218 PRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLP-RLTNGFGINTSPSWSPDGSK  295 (425)
T ss_pred             ceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcce-ecccCCccccCccCCCCCCE
Confidence            468888888775543333 23334567899998777654 4566  5666677766533 34433333335567773   


Q ss_pred             eEEEeecCCc--EEEEECCcc
Q psy16373        138 YVISLGQDER--LCVWDRFQG  156 (166)
Q Consensus       138 ~l~~~~~d~~--i~~wd~~~~  156 (166)
                      .+++.+..|.  |.++|...+
T Consensus       296 ivf~Sdr~G~p~I~~~~~~g~  316 (425)
T COG0823         296 IVFTSDRGGRPQIYLYDLEGS  316 (425)
T ss_pred             EEEEeCCCCCcceEEECCCCC
Confidence            4555555565  455555443

>PRK13616 lipoprotein LpqB; Provisional

Probab=85.17  E-value=16  Score=28.61  Aligned_cols=85  Identities=14%  Similarity=0.155  Sum_probs=47.5

Q ss_pred             eEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEE---EeCcCCe-ee---EEee-cccccEEEEEEcC
Q psy16373         65 TLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCV---WDTVTGA-CM---YSIQ-AHDGCIHALTYSD  136 (166)
Q Consensus        65 ~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~---~d~~~~~-~~---~~~~-~~~~~v~~i~~~~  136 (166)
                      .+.+.++..++...   .....|..+.|+|+|..++... ++.+.+   -....+. .+   ..+. .....+..+.|.+
T Consensus       431 ql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~  506 (591)
T PRK13616        431 QLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRT  506 (591)
T ss_pred             eEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccceEec
Confidence            44444554443322   2355799999999999887655 467766   3333443 11   1122 1223457889987


Q ss_pred             -CeEEEeecCCcEEEEEC
Q psy16373        137 -SYVISLGQDERLCVWDR  153 (166)
Q Consensus       137 -~~l~~~~~d~~i~~wd~  153 (166)
                       +.|+.+..++.-.+|.+
T Consensus       507 ~~~L~V~~~~~~~~v~~v  524 (591)
T PRK13616        507 GDSLVVGRSDPEHPVWYV  524 (591)
T ss_pred             CCEEEEEecCCCCceEEE
Confidence             45666655444444543

>KOG3522|consensus

Probab=85.12  E-value=5.7  Score=32.00  Aligned_cols=148  Identities=15%  Similarity=0.171  Sum_probs=76.2

Q ss_pred             EEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEccc-----ccceehhcCC
Q psy16373          9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLED-----QQLLFTLHGH   83 (166)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~-----~~~~~~~~~~   83 (166)
                      .+..|...+.+.++.....   ..+.............+.++.+...-+..|.-||++-.+--..     +++-..+...
T Consensus       549 Tic~gtq~ssisissss~~---s~ke~~~~~~spe~~~v~~l~~ss~Slgagl~dgt~a~y~rap~gSwd~ep~~~~~~g  625 (925)
T KOG3522|consen  549 TICLGTQTSSISISSSSLD---SIKEVTSEPPSPEHESVKLLLFSSGSLGAGLIDGTLAVYGRAPSGSWDGEPNISIPTG  625 (925)
T ss_pred             cccccCccceeEEeeccCC---cccceeccCCCCchhhhhhhhccccccccCccCCccccccCCCCCCCCCCCccccccC
Confidence            3455566666655554311   1111111222233445666666444455555555555432211     1122222333


Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec---ccccEEEEEEcCC-eEEEeecCCcEEEEECCcccce
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA---HDGCIHALTYSDS-YVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~---~~~~v~~i~~~~~-~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      ..+|.+.++..+   ++-++.+|.+.++...+.-.......   |...|+++....+ ..++-.....++.++..+-.-.
T Consensus       626 ~lPvrsla~~ed---~~was~gG~V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafasG~~~rlfhtetl~hl  702 (925)
T KOG3522|consen  626 SLPVRSLAFQED---FVWASEGGCVHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFASGDEERLFHTETLWHL  702 (925)
T ss_pred             Cccccchhhhhc---eeeeecCCceEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcCCCEEEEecccccCCc
Confidence            456777776543   44567899999999877655555443   4568898888874 3333233335666666554444


Q ss_pred             eee
Q psy16373        160 STI  162 (166)
Q Consensus       160 ~~~  162 (166)
                      +.+
T Consensus       703 qd~  705 (925)
T KOG3522|consen  703 QDS  705 (925)
T ss_pred             ccc
Confidence            433

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=85.11  E-value=13  Score=29.83  Aligned_cols=107  Identities=9%  Similarity=-0.034  Sum_probs=63.2

Q ss_pred             eEEEEecCCCceEEEeeccccc----ce---------eeceeeeeeeeccCCceEEEEec----CcEEEEEecCCeEEEE
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEE----EM---------TLTCCKVESTRAHHQPITVLECV----SNRVITGSQDHTLKVY   69 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~----~~---------~~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~d~~v~v~   69 (166)
                      .-.|+.|.++|.+..|..+.--    ..         .....+...+ .-...++++++.    .++||.+++...|.||
T Consensus       114 ~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~-~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVF  192 (717)
T PF08728_consen  114 EEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHL-RVGASAWGLDIHDYKKSRLIAVSSNSQEVTVF  192 (717)
T ss_pred             eeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEe-ecCCceeEEEEEecCcceEEEEecCCceEEEE
Confidence            4567777788888877652110    00         0001111111 233478888873    6678888888999988


Q ss_pred             Ecccc--ccee-hhcCCCCceEEEEEcCC-----CC-EEEEecCCCcEEEEeCc
Q psy16373         70 KLEDQ--QLLF-TLHGHCGPITTLFIDGV-----SM-MSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        70 ~~~~~--~~~~-~~~~~~~~v~~~~~~~~-----~~-~~~~~~~d~~v~~~d~~  114 (166)
                      -....  +... .-..+...|.+++|-++     |. .++.++-.|.+.+|++.
T Consensus       193 af~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I~  246 (717)
T PF08728_consen  193 AFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKIK  246 (717)
T ss_pred             EEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEEE
Confidence            76542  1111 11124556788888554     22 67778889999998873

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=84.91  E-value=7.3  Score=29.81  Aligned_cols=98  Identities=12%  Similarity=0.135  Sum_probs=59.5

Q ss_pred             cCcEE-EEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCC-------CEEEEecCCCcEEEEeCc-CCeeeEEee
Q psy16373         53 VSNRV-ITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVS-------MMSGSGSQDGLLCVWDTV-TGACMYSIQ  123 (166)
Q Consensus        53 ~~~~l-~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~-------~~~~~~~~d~~v~~~d~~-~~~~~~~~~  123 (166)
                      +.++| ..|..-..++-.|++.|+.+.+...|...  -+.+.|..       ..-+.|-.+..|.-.|.| .+..+...+
T Consensus       478 dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~e  555 (776)
T COG5167         478 DSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVE  555 (776)
T ss_pred             CcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeee
Confidence            33443 45666778888999999998888776654  45555541       122344455556666665 333333222


Q ss_pred             cccccEEEEEEc------CCeEEEeecCCcEEEEEC
Q psy16373        124 AHDGCIHALTYS------DSYVISLGQDERLCVWDR  153 (166)
Q Consensus       124 ~~~~~v~~i~~~------~~~l~~~~~d~~i~~wd~  153 (166)
                       ...-++.-.|+      .++++.++..|.|++||.
T Consensus       556 -sKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDR  590 (776)
T COG5167         556 -SKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDR  590 (776)
T ss_pred             -ehhccccccccccccccCceEEEecCCCceeeehh
Confidence             12222223332      369999999999999985

>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)

Probab=84.11  E-value=7.9  Score=27.39  Aligned_cols=68  Identities=13%  Similarity=0.240  Sum_probs=45.8

Q ss_pred             ceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCc-----eEEEEEcCCCCEEEEecCCCcEEEEeC
Q psy16373         46 PITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP-----ITTLFIDGVSMMSGSGSQDGLLCVWDT  113 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~~~~~d~~v~~~d~  113 (166)
                      -++++..  +|++|++.-.-..|.+.|-++++.+..+.+....     -..+++-.+-+.+-.+..++.|.++|=
T Consensus       145 HiNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN  219 (299)
T PF14269_consen  145 HINSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDN  219 (299)
T ss_pred             EeeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcC
Confidence            3777777  7899999999999999999999888887655221     112333333444444456677777764

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=83.49  E-value=4  Score=29.41  Aligned_cols=51  Identities=20%  Similarity=0.299  Sum_probs=34.3

Q ss_pred             CCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCccc
Q psy16373        105 DGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       105 d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~  157 (166)
                      .+.+.++|+++++....... ...+....|+|+  .++.. .++.|.+++..++.
T Consensus        22 ~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v-~~~nly~~~~~~~~   74 (353)
T PF00930_consen   22 KGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFV-RDNNLYLRDLATGQ   74 (353)
T ss_dssp             EEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEE-ETTEEEEESSTTSE
T ss_pred             ceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEE-ecCceEEEECCCCC
Confidence            35788999988765443332 567888999993  44444 46889999887773

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=83.29  E-value=15  Score=26.67  Aligned_cols=109  Identities=17%  Similarity=0.144  Sum_probs=65.5

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCC-CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccc---c
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC-GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDG---C  128 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~---~  128 (166)
                      ....++.++.++.+..+|.++++.+....... ..+..-.+-.++. +...+.++.+.-.|..++...........   .
T Consensus       110 ~~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~~v~~~~~-v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~  188 (370)
T COG1520         110 SDGKIYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASPPVVGDGT-VYVGTDDGHLYALNADTGTLKWTYETPAPLSLS  188 (370)
T ss_pred             eCCeEEEecccceEEEEECCCCcEEEEEecCCCeEEecCcEEcCcE-EEEecCCCeEEEEEccCCcEEEEEecCCccccc
Confidence            34558888889999999998888877666544 1111222222233 33334678888888888887666543221   1


Q ss_pred             E-EEEEEcCCeEEEeec--CCcEEEEECCcccceeee
Q psy16373        129 I-HALTYSDSYVISLGQ--DERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       129 v-~~i~~~~~~l~~~~~--d~~i~~wd~~~~~~~~~~  162 (166)
                      + .......+.++.+..  ++.+.-.|..+|..+.+.
T Consensus       189 ~~~~~~~~~~~vy~~~~~~~~~~~a~~~~~G~~~w~~  225 (370)
T COG1520         189 IYGSPAIASGTVYVGSDGYDGILYALNAEDGTLKWSQ  225 (370)
T ss_pred             cccCceeecceEEEecCCCcceEEEEEccCCcEeeee
Confidence            1 111123355666655  567888888888877663

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=83.26  E-value=17  Score=27.30  Aligned_cols=149  Identities=11%  Similarity=0.005  Sum_probs=68.0

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeee--ee---ccCCceEEEEe-cCcEEEEEe------cCCeEEEEEcc
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVES--TR---AHHQPITVLEC-VSNRVITGS------QDHTLKVYKLE   72 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~i~~~~~-~~~~l~~~~------~d~~v~v~~~~   72 (166)
                      .|+++++-|-..+.|.+.+.........-.+.+..  +.   +-..+-+.-+. +++.++++-      .-|.+.++|-+
T Consensus        86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~  165 (461)
T PF05694_consen   86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE  165 (461)
T ss_dssp             -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred             cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence            47788888877777766665432211111111111  11   11223333333 666776642      23567778877


Q ss_pred             cccceehhcCC---CCceEEEEEcCCCCEEEEecC--------------------CCcEEEEeCcCCeeeEEeeccc--c
Q psy16373         73 DQQLLFTLHGH---CGPITTLFIDGVSMMSGSGSQ--------------------DGLLCVWDTVTGACMYSIQAHD--G  127 (166)
Q Consensus        73 ~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~--------------------d~~v~~~d~~~~~~~~~~~~~~--~  127 (166)
                      +.+........   ...-..+.+.|..+.++|..-                    ..++.+||+++.+.++++.-..  .
T Consensus       166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~  245 (461)
T PF05694_consen  166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQ  245 (461)
T ss_dssp             T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEE
T ss_pred             cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCC
Confidence            66655544332   223467788888888877532                    3579999999999999886432  2


Q ss_pred             cEEEEEEc--CC---eEEEeecCCcEEEEEC
Q psy16373        128 CIHALTYS--DS---YVISLGQDERLCVWDR  153 (166)
Q Consensus       128 ~v~~i~~~--~~---~l~~~~~d~~i~~wd~  153 (166)
                      ....+.|.  |+   -++.+...++|..|--
T Consensus       246 ~pLEvRflH~P~~~~gFvg~aLss~i~~~~k  276 (461)
T PF05694_consen  246 MPLEVRFLHDPDANYGFVGCALSSSIWRFYK  276 (461)
T ss_dssp             EEEEEEE-SSTT--EEEEEEE--EEEEEEEE
T ss_pred             ceEEEEecCCCCccceEEEEeccceEEEEEE
Confidence            45567774  32   3444444555555543

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=82.90  E-value=3.4  Score=19.00  Aligned_cols=31  Identities=19%  Similarity=0.112  Sum_probs=21.6

Q ss_pred             CCCCEE-EEecCCCcEEEEeCcCCeeeEEeec
Q psy16373         94 GVSMMS-GSGSQDGLLCVWDTVTGACMYSIQA  124 (166)
Q Consensus        94 ~~~~~~-~~~~~d~~v~~~d~~~~~~~~~~~~  124 (166)
                      |+++.+ ++...++.|.++|..+++.+..+..
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v   32 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV   32 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence            344444 4445678999999988887777765

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=82.49  E-value=13  Score=25.51  Aligned_cols=109  Identities=12%  Similarity=0.138  Sum_probs=60.6

Q ss_pred             ccCCceEEEEe--cCcEEEEEecCCeEEEEEccc---cccee-----h---hcCCCCceEEEEEcCC-CCEEEEecCCCc
Q psy16373         42 AHHQPITVLEC--VSNRVITGSQDHTLKVYKLED---QQLLF-----T---LHGHCGPITTLFIDGV-SMMSGSGSQDGL  107 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~---~~~~~-----~---~~~~~~~v~~~~~~~~-~~~~~~~~~d~~  107 (166)
                      .+...+-.++|  .++.|+.+-...-..++.+..   ...+.     .   .......++++.++|. +.+++....+..
T Consensus       115 ~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~  194 (248)
T PF06977_consen  115 KGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRL  194 (248)
T ss_dssp             --SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTE
T ss_pred             CCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCe
Confidence            34566889999  456677777776667777653   11110     1   1223445789999998 677888888899


Q ss_pred             EEEEeCcCCeeeEEeeccc---------ccEEEEEEcC-CeEEEeecCCcEEEE
Q psy16373        108 LCVWDTVTGACMYSIQAHD---------GCIHALTYSD-SYVISLGQDERLCVW  151 (166)
Q Consensus       108 v~~~d~~~~~~~~~~~~~~---------~~v~~i~~~~-~~l~~~~~d~~i~~w  151 (166)
                      +..+| .+|+++..+.-..         ...-.|+|.+ +.|+..++.+..+.+
T Consensus       195 l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEpNlfy~f  247 (248)
T PF06977_consen  195 LLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEPNLFYRF  247 (248)
T ss_dssp             EEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETTTEEEEE
T ss_pred             EEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCCceEEEe
Confidence            99999 5777666553221         1345688887 467777776655544

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	166
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		7e-12
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		9e-11
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		6e-10
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		3e-09
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		1e-08
2gnq_A	336	Structure Of Wdr5 Length = 336		1e-08
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		1e-08
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		1e-08
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		2e-08
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		2e-08
2g99_A	308	Structural Basis For The Specific Recognition Of Me		2e-08
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		2e-08
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		2e-08
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		2e-08
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		2e-08
2h9l_A	329	Wdr5delta23 Length = 329		2e-08
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		2e-08
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		2e-08
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		2e-08
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		2e-08
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		3e-08
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		3e-08
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		5e-08
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		3e-07
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		3e-06
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		5e-04
4g56_B	357	Crystal Structure Of Full Length Prmt5/mep50 Comple		1e-04
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		1e-04
4gqb_B	344	Crystal Structure Of The Human Prmt5:mep50 Complex		2e-04
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		5e-04
3odt_A	313	Crystal Structure Of Wd40 Beta Propeller Domain Of		8e-04
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		8e-04
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		8e-04

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Query: 47  ITVLECV---SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS 103
           +  + CV     RV++G+ D  +KV+  E +  L TL GH   + +L  DG+ ++SGS  
Sbjct: 239 VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGS-- 296
Query: 104 QDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQ 163
            D  + VWD  TG C++++  H      +   D+ ++S   D  + +WD   G  L T+Q
Sbjct: 297 LDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 356

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 57  VITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG 116
           +++ S D T+KV+ L + +L  TL GH G ++T+ +     +  SG +DG++ +WD   G
Sbjct: 534 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG 593
Query: 117 ACMYSIQAHDGCIHALTYS-DSYVISLGQDERLCVWD 152
             +YS++A +  IHAL +S + Y +    +  + +WD
Sbjct: 594 KKLYSLEA-NSVIHALCFSPNRYWLCAATEHGIKIWD 629

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 32/159 (20%)
Query: 34  CCKVESTRAHHQPITVLECVSNR----VITGSQDHTLKVYKLE------------DQQLL 77
           CC       H+  +  L+ V  +    ++TGS+D+TL V+KL             D  L+
Sbjct: 194 CC-THVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLV 252
Query: 78  F-----------TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHD 126
           F            L GH   + T  + G   +  SGS D  L VWD     C+Y +  H 
Sbjct: 253 FHTPEENPYFVGVLRGHMASVRT--VSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT 310
Query: 127 GCIHALTY--SDSYVISLGQDERLCVWDRFQGHLLSTIQ 163
             I++  Y       IS   D  + +WD   G L+ T+Q
Sbjct: 311 DRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ 349

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 32/159 (20%)
Query: 34  CCKVESTRAHHQPITVLECVSNR----VITGSQDHTLKVYKLE------------DQQLL 77
           CC       H+  +  L+ V  +    ++TGS+D+TL V+KL             D  L+
Sbjct: 194 CC-THVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLV 252
Query: 78  F-----------TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHD 126
           F            L GH   + T  + G   +  SGS D  L VWD     C+Y +  H 
Sbjct: 253 FHTPEENPYFVGVLRGHXASVRT--VSGHGNIVVSGSYDNTLIVWDVAQXKCLYILSGHT 310
Query: 127 GCIHALTY--SDSYVISLGQDERLCVWDRFQGHLLSTIQ 163
             I++  Y       IS   D  + +WD   G L  T+Q
Sbjct: 311 DRIYSTIYDHERKRCISASXDTTIRIWDLENGELXYTLQ 349

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 55/142 (38%), Gaps = 18/142 (12%)
Query: 24  MQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGH 83
           M  EE+      K E+  A  QP        ++      ++ LK          FTL GH
Sbjct: 1   MATEEK------KPETEAARAQPTPSSSATQSKPTPVKPNYALK----------FTLAGH 44
Query: 84  CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYS--DSYVIS 141
              ++++          S S D L+ +W    G    +I  H   I  + +S   + ++S
Sbjct: 45  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVS 104
Query: 142 LGQDERLCVWDRFQGHLLSTIQ 163
              D+ L +WD   G  L T++
Sbjct: 105 ASDDKTLKIWDVSSGKCLKTLK 126

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 55/142 (38%), Gaps = 18/142 (12%)
Query: 24  MQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGH 83
           M  EE+      K E+  A  QP        ++      ++ LK          FTL GH
Sbjct: 3   MATEEK------KPETEAARAQPTPSSSATQSKPTPVKPNYALK----------FTLAGH 46
Query: 84  CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYS--DSYVIS 141
              ++++          S S D L+ +W    G    +I  H   I  + +S   + ++S
Sbjct: 47  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVS 106
Query: 142 LGQDERLCVWDRFQGHLLSTIQ 163
              D+ L +WD   G  L T++
Sbjct: 107 ASDDKTLKIWDVSSGKCLKTLK 128

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 17  SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQL 76
           S  D K +++ +  +  C K     +++         SN +++GS D +++++ ++  + 
Sbjct: 85  SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 144
Query: 77  LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS-IQAHDGCIHALTYS 135
           L TL  H  P++ +  +    +  S S DGL  +WDT +G C+ + I   +  +  + +S
Sbjct: 145 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 204
Query: 136 DS--YVISLGQDERLCVWDRFQGHLLST 161
            +  Y+++   D  L +WD  +G  L T
Sbjct: 205 PNGKYILAATLDNTLKLWDYSKGKCLKT 232

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 17  SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQL 76
           S  D K +++ +  +  C K     +++         SN +++GS D +++++ ++  + 
Sbjct: 81  SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 140
Query: 77  LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS-IQAHDGCIHALTYS 135
           L TL  H  P++ +  +    +  S S DGL  +WDT +G C+ + I   +  +  + +S
Sbjct: 141 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 200
Query: 136 DS--YVISLGQDERLCVWDRFQGHLLST 161
            +  Y+++   D  L +WD  +G  L T
Sbjct: 201 PNGKYILAATLDNTLKLWDYSKGKCLKT 228

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 17  SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQL 76
           S  D K +++ +  +  C K     +++         SN +++GS D +++++ ++  + 
Sbjct: 88  SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 147
Query: 77  LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS-IQAHDGCIHALTYS 135
           L TL  H  P++ +  +    +  S S DGL  +WDT +G C+ + I   +  +  + +S
Sbjct: 148 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 207
Query: 136 DS--YVISLGQDERLCVWDRFQGHLLST 161
            +  Y+++   D  L +WD  +G  L T
Sbjct: 208 PNGKYILAATLDNTLKLWDYSKGKCLKT 235

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 17  SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQL 76
           S  D K +++ +  +  C K     +++         SN +++GS D +++++ ++  + 
Sbjct: 82  SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 141
Query: 77  LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS-IQAHDGCIHALTYS 135
           L TL  H  P++ +  +    +  S S DGL  +WDT +G C+ + I   +  +  + +S
Sbjct: 142 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 201
Query: 136 DS--YVISLGQDERLCVWDRFQGHLLST 161
            +  Y+++   D  L +WD  +G  L T
Sbjct: 202 PNGKYILAATLDNTLKLWDYSKGKCLKT 229

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 54  SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT 113
           SN +++GS D +++++ ++  + L TL  H  P++ +  +    +  S S DGL  +WDT
Sbjct: 115 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 174
Query: 114 VTGACMYS-IQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLST 161
            +G C+ + I   +  +  + +S +  Y+++   D  L +WD  +G  L T
Sbjct: 175 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 225

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 17  SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQL 76
           S  D K +++ +  +  C K     +++         SN +++GS D +++++ ++  + 
Sbjct: 85  SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 144
Query: 77  LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS-IQAHDGCIHALTYS 135
           L TL  H  P++ +  +    +  S S DGL  +WDT +G C+ + I   +  +  + +S
Sbjct: 145 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 204
Query: 136 DS--YVISLGQDERLCVWDRFQGHLLST 161
            +  Y+++   D  L +WD  +G  L T
Sbjct: 205 PNGKYILAATLDNTLKLWDYSKGKCLKT 232

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 17  SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQL 76
           S  D K +++ +  +  C K     +++         SN +++GS D +++++ ++  + 
Sbjct: 88  SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 147
Query: 77  LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS-IQAHDGCIHALTYS 135
           L TL  H  P++ +  +    +  S S DGL  +WDT +G C+ + I   +  +  + +S
Sbjct: 148 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 207
Query: 136 DS--YVISLGQDERLCVWDRFQGHLLST 161
            +  Y+++   D  L +WD  +G  L T
Sbjct: 208 PNGKYILAATLDNTLKLWDYSKGKCLKT 235

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 17  SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQL 76
           S  D K +++ +  +  C K     +++         SN +++GS D +++++ ++  + 
Sbjct: 85  SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 144
Query: 77  LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS-IQAHDGCIHALTYS 135
           L TL  H  P++ +  +    +  S S DGL  +WDT +G C+ + I   +  +  + +S
Sbjct: 145 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 204
Query: 136 DS--YVISLGQDERLCVWDRFQGHLLST 161
            +  Y+++   D  L +WD  +G  L T
Sbjct: 205 PNGKYILAATLDNTLKLWDYSKGKCLKT 232

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 54  SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT 113
           SN +++GS D +++++ ++  + L TL  H  P++ +  +    +  S S DGL  +WDT
Sbjct: 119 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 178
Query: 114 VTGACMYS-IQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLST 161
            +G C+ + I   +  +  + +S +  Y+++   D  L +WD  +G  L T
Sbjct: 179 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 229

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 17  SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQL 76
           S  D K +++ +  +  C K     +++         SN +++GS D +++++ ++  + 
Sbjct: 99  SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 158
Query: 77  LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS-IQAHDGCIHALTYS 135
           L TL  H  P++ +  +    +  S S DGL  +WDT +G C+ + I   +  +  + +S
Sbjct: 159 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 218
Query: 136 DS--YVISLGQDERLCVWDRFQGHLLST 161
            +  Y+++   D  L +WD  +G  L T
Sbjct: 219 PNGKYILAATLDNTLKLWDYSKGKCLKT 246

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 13  GSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSN--RVITGSQDHTLKVYK 70
           G+ GS    K   V+    L      +   H + ++ ++   N   + + S D  +K++ 
Sbjct: 1   GAMGSATQSKPTPVKPNYALKF----TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG 56
Query: 71  LEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIH 130
             D +   T+ GH   I+ +     S +  S S D  L +WD  +G C+ +++ H   + 
Sbjct: 57  AYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF 116
Query: 131 ALTYS--DSYVISLGQDERLCVWDRFQGHLLSTIQ 163
              ++   + ++S   DE + +WD   G  L T+ 
Sbjct: 117 CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP 151

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 54  SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT 113
           SN +++GS D +++++ ++  + L TL  H  P++ +  +    +  S S DGL  +WDT
Sbjct: 125 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 184
Query: 114 VTGACMYS-IQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLST 161
            +G C+ + I   +  +  + +S +  Y+++   D  L +WD  +G  L T
Sbjct: 185 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 235

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 17  SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQL 76
           S  D K +++ +  +  C K     +++         SN +++GS D +++++ ++  + 
Sbjct: 83  SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 142
Query: 77  LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS-IQAHDGCIHALTYS 135
           L TL  H  P++ +  +    +  S S DGL  +WDT +G C+ + I   +  +  + +S
Sbjct: 143 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 202
Query: 136 DS--YVISLGQDERLCVWDRFQGHLLST 161
            +  Y+++   D  L +WD  +G  L T
Sbjct: 203 PNGKYILAATLDNTLKLWDYSKGKCLKT 230

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 43  HHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTL-FIDGVSMMSGS 101
           H   + V++     +++ S D T+KV+     + + TL+GH   I  L + D + +   S
Sbjct: 255 HRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVV---S 311
Query: 102 GSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWD 152
           GS D  + +WD   GAC+  ++ H+  +  + + +  ++S   D ++ VWD
Sbjct: 312 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWD 362

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 54  SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT 113
           SN +++ S D TLK++ +   + L TL GH   +     +  S +  SGS D  + +WD 
Sbjct: 80  SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 139
Query: 114 VTGACMYSIQAHDGCIHALTYS--DSYVISLGQDERLCVWDRFQGHLLSTI 162
            TG C+ ++ AH   + A+ ++   S ++S   D    +WD   G  L T+
Sbjct: 140 KTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 190

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 54  SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT 113
           SN +++ S D TLK++ +   + L TL GH   +     +  S +  SGS D  + +WD 
Sbjct: 80  SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 139
Query: 114 VTGACMYSIQAHDGCIHALTYS--DSYVISLGQDERLCVWDRFQGHLLSTI 162
            TG C+ ++ AH   + A+ ++   S ++S   D    +WD   G  L T+
Sbjct: 140 KTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 190

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 59  TGSQDHTLKVYKLEDQQLLFTLHGHCGPITTL--FIDGVSMMSGSGSQDGLLCVWDTVTG 116
           TG++D  ++++ +E+++++  L GH   I +L  F  G  ++SGSG  D  + +WD  TG
Sbjct: 140 TGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG--DRTVRIWDLRTG 197
Query: 117 ACMYSIQAHDGCIH-ALTYSDSYVISLGQ-DERLCVWDRFQGHLLSTI 162
            C  ++   DG    A++  D   I+ G  D  + VWD   G L+  +
Sbjct: 198 QCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERL 245

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 55  NRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV 114
           N  ++ S DH+L+++ L++ Q  +   GH   + ++     +    SG +D  L VW+ V
Sbjct: 80  NFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQIVSGGRDNALRVWN-V 138
Query: 115 TGACMYSIQ--AHDGCIHALTYSDS----YVISLGQDERLCVWDRFQGHLLSTIQ 163
            G CM+++   AH   +  + +S S     ++S G D  + VWD   G L++ ++
Sbjct: 139 KGECMHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLK 193

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 42  AHHQPIT--VLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMS 99
            H  P+T  +   V + +++ S+D T+KV+  E      TL GH   +  +  D    + 
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 100 GSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTY--SDSYVISLGQDERLCVWDRFQGH 157
            S S D  + +WD     C+ ++  HD  + +++   +  +++S  +D+ + +W+   G+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 158 LLSTI 162
            + T 
Sbjct: 226 CVKTF 230

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 101 SGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTY--SDSYVISLGQDERLCVWDRFQGHL 158
           SGS+D  + +WD  TG C+ ++  HD  +  + +     +++S   D+ L VWD      
Sbjct: 313 SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 372
Query: 159 LSTIQ 163
           + T+ 
Sbjct: 373 MKTLN 377

>pdb|4G56|B Chain B, Crystal Structure Of Full Length Prmt5/mep50 Complexes From Xenopus Laevis Length = 357

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 16/159 (10%)
Query: 16  GSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNR-VITGSQDHTLKVYK-LED 73
           GS+  FK  +     +L    V++       +T +  VS + ++  S    +++++ LE 
Sbjct: 70  GSIWVFKDPEGAPNESLCTAGVQTEAG----VTDVAWVSEKGILVASDSGAVELWEILEK 125
Query: 74  QQLL---FTLHGHCGPITTL--FIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHD-- 126
           + LL   F  + H   + TL  F DG   +SG   +D  + VWD    A + S  AH   
Sbjct: 126 ESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG--KDFSVKVWDLSQKAVLKSYNAHSSE 183
Query: 127 -GCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL 164
             C+ A    D+  +S G+D R+ +WD  +    + I  
Sbjct: 184 VNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDF 222

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 56  RVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSG----SGSQDGLLCVW 111
           +++T S D T  ++ +E  QLL + HGH   +  L +D     +G    SG  D    VW
Sbjct: 168 QILTASGDGTCALWDVESGQLLQSFHGHGADV--LCLDLAPSETGNTFVSGGCDKKAMVW 225
Query: 112 DTVTGACMYSIQAHDGCIHALTYSDS-YVISLGQDERLC 149
           D  +G C+ + + H+  ++++ Y  S    + G D+  C
Sbjct: 226 DMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATC 264

>pdb|4GQB|B Chain B, Crystal Structure Of The Human Prmt5:mep50 Complex Length = 344

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 57  VITGSQDHTLKVYKLEDQQLL----FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWD 112
           ++  S    +++++L++ + L    F  + H   ++T+ +      + SGS+D  + VWD
Sbjct: 96  ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWD 155
Query: 113 TVTGACMYSIQAHDG---CIHALTYSDSYVISLGQDERLCVWD 152
                 + S +AH     C+ A  + DS  +S  +D R+ +WD
Sbjct: 156 LAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWD 198

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 57  VITGSQDHTLKVYKL--EDQQLLF-----TLHGHCGPITTLFIDGVSMMSGSGSQDGLLC 109
           +I+GS+D T+ ++KL  E+Q   F      L GH   ++ L +   +  + S S D  L 
Sbjct: 42  LISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLR 101
Query: 110 VWDTVTGACMYSIQAHDGCIHALTYS--DSYVISLGQDERLCVWD 152
           +WD  TG        H   ++++ +S  +  ++S G +  + +W+
Sbjct: 102 LWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWN 146

>pdb|3ODT|A Chain A, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1 Length = 313

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 20/152 (13%)
Query: 22  KKMQVEEEMTLTCCKVESTRAHHQPITVLECVS---NRVITGSQDHTLKVYKLEDQQLLF 78
           K  +V +E +L    V + +AH+  +   + VS   N+ +T S D T+K++  ++ +++ 
Sbjct: 124 KTAKVWKEGSL----VYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLW--QNDKVIK 177
Query: 79  TLHG-HCGPITTLFI--DGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDG---CIHAL 132
           T  G H   +  L +  DG  +   S S DGL+ + D  TG  + + + H+    CI  L
Sbjct: 178 TFSGIHNDVVRHLAVVDDGHFI---SCSNDGLIKLVDXHTGDVLRTYEGHESFVYCIKLL 234
Query: 133 TYSDSYVISLGQDERLCVWDRFQGHLLSTIQL 164
              D  ++S G+D  + +W +  G L   I L
Sbjct: 235 PNGD--IVSCGEDRTVRIWSKENGSLKQVITL 264

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 54  SNRVITG-SQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWD 112
           SN +I     D  +KV+ L + +L     GH G + T+ +     +  SG +DG   +WD
Sbjct: 161 SNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Query: 113 TVTGACMYSIQAHDGCIHALTYS-DSYVISLGQDERLCVWDRFQGHLL 159
              G  +Y++   D  I+AL +S + Y +       + +WD  +G ++
Sbjct: 221 LNEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKIWD-LEGKII 266

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 54  SNRVITG-SQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWD 112
           SN +I     D  +KV+ L + +L     GH G + T+ +     +  SG +DG   +WD
Sbjct: 184 SNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 243
Query: 113 TVTGACMYSIQAHDGCIHALTYS-DSYVISLGQDERLCVWDRFQGHLL 159
              G  +Y++   D  I+AL +S + Y +       + +WD  +G ++
Sbjct: 244 LNEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKIWD-LEGKII 289

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	166
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.97
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.97
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.96
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.96
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.96
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.96
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.96
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.96
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.96
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.96
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.96
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.96
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.96
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.96
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.95
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.95
2pm7_B	297	Protein transport protein SEC13, protein transport	99.95
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.95
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.95
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.95
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.95
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.95
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.95
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.95
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.95
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.94
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.94
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.94
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.94
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.94
2pm7_B	297	Protein transport protein SEC13, protein transport	99.94
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.94
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.94
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.94
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.94
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.94
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.93
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.93
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.93
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.93
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.93
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.93
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.93
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.93
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.93
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.93
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.93
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.93
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.93
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.93
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.93
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.93
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.93
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.93
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.93
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.93
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.93
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.93
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.93
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.93
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.93
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.93
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.92
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.92
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.92
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.92
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.92
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.92
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.92
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.92
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.92
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.92
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.92
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.92
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.92
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.92
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.91
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.91
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.91
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.91
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.91
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.91
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.91
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.91
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.91
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.91
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.91
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.91
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.91
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.91
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.91
3jro_A	753	Fusion protein of protein transport protein SEC13	99.91
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.91
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.91
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.9
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.9
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.9
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.9
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.9
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.9
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.9
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.9
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.9
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.89
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.89
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.89
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.89
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.89
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.89
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.89
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.89
3jro_A	753	Fusion protein of protein transport protein SEC13	99.88
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.88
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.88
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.88
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.88
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.88
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.88
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.88
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.87
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.87
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.86
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.85
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.84
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.83
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.83
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.77
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.77
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.67
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.62
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.61
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.59
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.56
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.56
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.52
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.52
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.52
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.51
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.48
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.48
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.46
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.46
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.46
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.45
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.45
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.45
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.44
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.43
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.42
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.41
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.41
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.37
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.37
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.33
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.31
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.31
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.31
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.26
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.25
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.24
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.23
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.21
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.14
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.13
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.13
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.13
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.11
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.1
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.07
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.04
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.03
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.02
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.01
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.01
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	98.99
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	98.95
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	98.94
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	98.94
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	98.91
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	98.9
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.89
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	98.88
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	98.87
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	98.87
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	98.85
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	98.85
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	98.83
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.82
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	98.82
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	98.82
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	98.78
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	98.75
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.73
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.73
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.7
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	98.69
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	98.66
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	98.66
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	98.61
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	98.61
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.58
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.56
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.55
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	98.54
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.52
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	98.48
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	98.48
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	98.47
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.46
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.44
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.44
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	98.44
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.41
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.41
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	98.41
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	98.39
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.39
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.39
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.38
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.37
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.36
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	98.34
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	98.29
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.28
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	98.28
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	98.26
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	98.2
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.19
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.19
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.15
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.11
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.1
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.09
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.09
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	98.07
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.04
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.03
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.03
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.03
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.03
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.02
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	97.97
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	97.95
2ece_A	462	462AA long hypothetical selenium-binding protein;	97.92
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	97.91
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	97.83
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	97.77
2qe8_A	343	Uncharacterized protein; structural genomics, join	97.75
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	97.72
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	97.52
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	97.44
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	97.43
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	97.11
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	97.03
4a2l_A	795	BT_4663, two-component system sensor histidine kin	97.02
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.85
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	96.58
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	96.5
3v9f_A	781	Two-component system sensor histidine kinase/RESP	96.49
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	96.39
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	96.32
4a2l_A	795	BT_4663, two-component system sensor histidine kin	96.25
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	96.23
3v9f_A	781	Two-component system sensor histidine kinase/RESP	96.07
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	95.81
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	95.8
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	95.72
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	95.53
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	95.4
3v65_B	386	Low-density lipoprotein receptor-related protein;	95.33
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	95.12
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	94.95
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	94.91
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	94.83
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	94.8
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	94.68
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	94.64
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	94.58
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	94.36
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	94.32
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	94.31
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	94.19
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	93.93
3v65_B	386	Low-density lipoprotein receptor-related protein;	93.7
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	93.52
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	93.49
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	93.29
3f7f_A	729	Nucleoporin NUP120; nuclear pore complex, macromol	93.14
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	93.1
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	93.08
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	92.59
2p4o_A	306	Hypothetical protein; putative lactonase, structur	92.33
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	92.27
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	92.24
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	92.21
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	92.16
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	91.81
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	91.7
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	91.6
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	91.19
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	90.93
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	90.91
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	90.8
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	90.68
2p4o_A	306	Hypothetical protein; putative lactonase, structur	90.4
3f7f_A	729	Nucleoporin NUP120; nuclear pore complex, macromol	90.31
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	90.2
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	89.72
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	88.93
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	88.52
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	88.4
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	88.14
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	88.13
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	88.01
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	87.44
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	87.31
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	87.18
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	87.04
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	86.83
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	85.75
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	85.06
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	84.72
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	83.09
3ott_A	758	Two-component system sensor histidine kinase; beta	82.84
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	81.87

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.97  E-value=9.2e-29  Score=169.97  Aligned_cols=152  Identities=17%  Similarity=0.223  Sum_probs=135.2

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      ++.+..+++|+.|+.+++|+.....       ....+..|..+|.+++|  ++++|++|+.|+.|++||+.+++.+..+.
T Consensus        22 sp~~~~l~s~~~dg~v~lWd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~   94 (304)
T 2ynn_A           22 HPTEPWVLTTLYSGRVELWNYETQV-------EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE   94 (304)
T ss_dssp             CSSSSEEEEEETTSEEEEEETTTTE-------EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             CCCCCEEEEEcCCCcEEEEECCCCc-------eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEe
Confidence            4567789999999999999986533       34466789999999999  88999999999999999999999999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC-eeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCccc
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      +|...|.+++|+|++.++++++.|++|++||++++ .....+.+|...|.+++|+|   ..+++++.|+.|++||++++.
T Consensus        95 ~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~  174 (304)
T 2ynn_A           95 AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST  174 (304)
T ss_dssp             CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSS
T ss_pred             CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence            99999999999999999999999999999999987 55667889999999999998   389999999999999998877


Q ss_pred             ceeee
Q psy16373        158 LLSTI  162 (166)
Q Consensus       158 ~~~~~  162 (166)
                      +...+
T Consensus       175 ~~~~~  179 (304)
T 2ynn_A          175 PNFTL  179 (304)
T ss_dssp             CSEEE
T ss_pred             cccee
Confidence            65544

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.97  E-value=3.2e-28  Score=168.60  Aligned_cols=153  Identities=20%  Similarity=0.280  Sum_probs=138.4

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      ++.+..+++|+.++.+.+|+.....       ....+..|...|.+++|  ++++|++|+.|+.|++||+++++.+..+.
T Consensus       131 spdg~~l~~g~~dg~v~i~~~~~~~-------~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~  203 (321)
T 3ow8_A          131 SPDSQYLATGTHVGKVNIFGVESGK-------KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE  203 (321)
T ss_dssp             CTTSSEEEEECTTSEEEEEETTTCS-------EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred             CCCCCEEEEEcCCCcEEEEEcCCCc-------eeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc
Confidence            3456789999999999999986543       23356678889999999  88999999999999999999999999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      +|..+|.+++|+|++.++++++.|+.|++||+++++.+..+.+|...|.+++|+|  .+|++++.|+.|++||+++++++
T Consensus       204 ~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~  283 (321)
T 3ow8_A          204 GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV  283 (321)
T ss_dssp             CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred             ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence            9999999999999999999999999999999999999999999999999999998  48999999999999999999988


Q ss_pred             eeee
Q psy16373        160 STIQ  163 (166)
Q Consensus       160 ~~~~  163 (166)
                      .++.
T Consensus       284 ~~~~  287 (321)
T 3ow8_A          284 HTFF  287 (321)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            7764

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.96  E-value=2.2e-28  Score=174.43  Aligned_cols=152  Identities=15%  Similarity=0.252  Sum_probs=138.2

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      +....+++|+.|+.+++|+.....       ....+.+|...|.+++|  ++++|++|+.|+.|++||+.+++.+..+.+
T Consensus       118 p~~~~l~s~s~Dg~i~vwd~~~~~-------~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~  190 (410)
T 1vyh_C          118 PVFSVMVSASEDATIKVWDYETGD-------FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG  190 (410)
T ss_dssp             SSSSEEEEEESSSCEEEEETTTCC-------CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCC
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCc-------EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcC
Confidence            345689999999999999976543       33467899999999999  788999999999999999999999999999


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccccee
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      |...|.+++|+|++..+++++.|++|++||++++.++..+.+|...|.++.|++  ..+++++.|+.|++||+++++...
T Consensus       191 h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~  270 (410)
T 1vyh_C          191 HDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA  270 (410)
T ss_dssp             CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred             CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceee
Confidence            999999999999999999999999999999999999999999999999999998  489999999999999999988776


Q ss_pred             eee
Q psy16373        161 TIQ  163 (166)
Q Consensus       161 ~~~  163 (166)
                      .+.
T Consensus       271 ~~~  273 (410)
T 1vyh_C          271 ELR  273 (410)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            654

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.96  E-value=1.1e-27  Score=167.34  Aligned_cols=154  Identities=15%  Similarity=0.195  Sum_probs=129.7

Q ss_pred             EEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCc
Q psy16373          9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP   86 (166)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~   86 (166)
                      .+++|+.|+.+++|+....+...   .......+|...|.+++|  ++++|++|+.|+.|++||+++++.+..+.+|...
T Consensus        95 ~l~~~s~dg~v~lWd~~~~~~~~---~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~  171 (344)
T 4gqb_B           95 GILVASDSGAVELWELDENETLI---VSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQ  171 (344)
T ss_dssp             EEEEEETTSEEEEEEECTTSSCE---EEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred             eEEEEECCCEEEEEeccCCCcee---EeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCc
Confidence            57899999999999986554221   122345689999999999  8899999999999999999999999999999999


Q ss_pred             eEEEEEcCCC-CEEEEecCCCcEEEEeCcCCeeeEEee--cccccEEEEEEcC---CeEEEeecCCcEEEEECCccccee
Q psy16373         87 ITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSIQ--AHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus        87 v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~~~~~~--~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      |.+++|+|++ ..+++++.|++|++||++++++...+.  .+...+.+++|+|   .++++++.|+.|++||+++++++.
T Consensus       172 V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~  251 (344)
T 4gqb_B          172 VTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVL  251 (344)
T ss_dssp             EEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCE
T ss_pred             eEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEE
Confidence            9999999986 578999999999999999998887764  3455789999997   378899999999999999999988


Q ss_pred             eeeec
Q psy16373        161 TIQLQ  165 (166)
Q Consensus       161 ~~~~~  165 (166)
                      ++..+
T Consensus       252 ~~~~h  256 (344)
T 4gqb_B          252 SSAVH  256 (344)
T ss_dssp             EEECC
T ss_pred             EEcCC
Confidence            87643

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.96  E-value=1.5e-27  Score=166.27  Aligned_cols=157  Identities=18%  Similarity=0.261  Sum_probs=138.4

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      ++.+..+++|+.++.+++|+......   .......+.+|...|.++.| .++.+++++.|+.|++||+++++.+..+.+
T Consensus       106 s~~~~~l~s~~~d~~v~iw~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~  182 (340)
T 1got_B          106 APSGNYVACGGLDNICSIYNLKTREG---NVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTG  182 (340)
T ss_dssp             CTTSSEEEEEETTCEEEEEETTTCSB---SCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred             CCCCCEEEEEeCCCeEEEEECccCCC---cceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcC
Confidence            34566889999999999999865431   12234467799999999999 777899999999999999999999999999


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccccee
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      |...|.+++|+|++.++++++.|+.|++||++++.++..+.+|...|++++|+|  +.+++++.|+.|++||+++++.+.
T Consensus       183 h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~  262 (340)
T 1got_B          183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM  262 (340)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred             CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence            999999999999999999999999999999999999999999999999999998  599999999999999999887766


Q ss_pred             eee
Q psy16373        161 TIQ  163 (166)
Q Consensus       161 ~~~  163 (166)
                      .+.
T Consensus       263 ~~~  265 (340)
T 1got_B          263 TYS  265 (340)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            553

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.96  E-value=5.9e-28  Score=167.24  Aligned_cols=143  Identities=23%  Similarity=0.371  Sum_probs=130.7

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      ++.+..+++|+.++.+++|+.....       .+..+.+|..+|.+++|  ++.+|++|+.|+.|++||+++++....+.
T Consensus       173 spdg~~lasg~~dg~i~iwd~~~~~-------~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~  245 (321)
T 3ow8_A          173 SPDGKYLASGAIDGIINIFDIATGK-------LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS  245 (321)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred             CCCCCEEEEEcCCCeEEEEECCCCc-------EEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc
Confidence            3456789999999999999976432       34567789999999999  78899999999999999999999999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEEC
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDR  153 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~  153 (166)
                      +|...|.+++|+|++.++++++.|+.|++||+++++++..+.+|...|.+++|+|  ..|++++.|+.|++||.
T Consensus       246 ~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~  319 (321)
T 3ow8_A          246 GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC  319 (321)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred             CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence            9999999999999999999999999999999999999999999999999999998  48999999999999996

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.96  E-value=2.3e-27  Score=163.00  Aligned_cols=155  Identities=17%  Similarity=0.228  Sum_probs=133.3

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      ++.+..+++|+.|+.+++|+.....      .....+.+|...|.+++|   ++..|++|+.|+.|++||+.+......+
T Consensus       106 ~~~~~~l~sgs~D~~v~lWd~~~~~------~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~  179 (304)
T 2ynn_A          106 HPTKPYVLSGSDDLTVKLWNWENNW------ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL  179 (304)
T ss_dssp             CSSSSEEEEEETTSCEEEEEGGGTT------EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEE
T ss_pred             cCCCCEEEEECCCCeEEEEECCCCc------chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcccee
Confidence            3456689999999999999986542      223456789999999999   3578999999999999999887666555


Q ss_pred             c-CCCCceEEEEEcC--CCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373         81 H-GHCGPITTLFIDG--VSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        81 ~-~~~~~v~~~~~~~--~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~  155 (166)
                      . +|...+..++++|  ++.++++++.|+.|++||+++++++..+.+|...|..++|+|  ..|++++.|+.|++||+++
T Consensus       180 ~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~  259 (304)
T 2ynn_A          180 TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST  259 (304)
T ss_dssp             ECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred             ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence            4 4667899999976  578999999999999999999999999999999999999999  4899999999999999999


Q ss_pred             ccceeeeee
Q psy16373        156 GHLLSTIQL  164 (166)
Q Consensus       156 ~~~~~~~~~  164 (166)
                      ++.+.++..
T Consensus       260 ~~~~~~~~~  268 (304)
T 2ynn_A          260 YKVEKTLNV  268 (304)
T ss_dssp             CCEEEEECC
T ss_pred             CceeeeccC
Confidence            998887754

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.96  E-value=3.9e-27  Score=162.87  Aligned_cols=154  Identities=20%  Similarity=0.274  Sum_probs=135.1

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      +.++++|+.|+.+++|+......  ....+...+.+|...|.+++|  ++.+|++|+.|+.|++||+++++.+..+.+|.
T Consensus        30 ~~~l~s~s~D~~v~~W~~~~~~~--~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~  107 (319)
T 3frx_A           30 PNLLLSASRDKTLISWKLTGDDQ--KFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHK  107 (319)
T ss_dssp             TTEEEEEETTSEEEEEEEEEETT--EEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred             ccEEEEecCCccEEEecCCCCCc--cccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCC
Confidence            36899999999999999864432  112355678899999999999  88999999999999999999999999999999


Q ss_pred             CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--------eEEEeecCCcEEEEECCcc
Q psy16373         85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--------YVISLGQDERLCVWDRFQG  156 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--------~l~~~~~d~~i~~wd~~~~  156 (166)
                      ..|.+++|+|++.++++++.|++|++||++ +..+..+.+|...|.++.|.|.        .+++++.|+.|++||++++
T Consensus       108 ~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~  186 (319)
T 3frx_A          108 SDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF  186 (319)
T ss_dssp             SCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT
T ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc
Confidence            999999999999999999999999999996 5667788899999999999873        7999999999999999988


Q ss_pred             cceeeee
Q psy16373        157 HLLSTIQ  163 (166)
Q Consensus       157 ~~~~~~~  163 (166)
                      +....+.
T Consensus       187 ~~~~~~~  193 (319)
T 3frx_A          187 QIEADFI  193 (319)
T ss_dssp             EEEEEEC
T ss_pred             hhheeec
Confidence            7665553

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.96  E-value=4.7e-27  Score=161.63  Aligned_cols=152  Identities=26%  Similarity=0.375  Sum_probs=136.8

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      ++.+..+++|+.|+.+++|+.....       ....+.+|...|.+++|  ++++|++++.|+.|++||+++++.+..+.
T Consensus        32 s~~~~~l~s~~~dg~i~iw~~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~  104 (312)
T 4ery_A           32 SPNGEWLASSSADKLIKIWGAYDGK-------FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK  104 (312)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTCC-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             CCCCCEEEEeeCCCeEEEEeCCCcc-------cchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEc
Confidence            3456689999999999999875432       23456789999999999  78899999999999999999999999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      +|...|.+++|+|++.++++++.|+.+++||+++++.+..+..|..+|.+++|+|  ..+++++.|+.|++||+++++.+
T Consensus       105 ~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~  184 (312)
T 4ery_A          105 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL  184 (312)
T ss_dssp             CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred             CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcee
Confidence            9999999999999999999999999999999999999999999999999999998  48999999999999999998877


Q ss_pred             eee
Q psy16373        160 STI  162 (166)
Q Consensus       160 ~~~  162 (166)
                      ..+
T Consensus       185 ~~~  187 (312)
T 4ery_A          185 KTL  187 (312)
T ss_dssp             EEE
T ss_pred             eEE
Confidence            655

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.96  E-value=2.4e-27  Score=164.64  Aligned_cols=153  Identities=15%  Similarity=0.274  Sum_probs=123.3

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc----cce
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ----QLL   77 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~----~~~   77 (166)
                      ++.+..+++|+.|+.+++|+................+.+|..+|.+++|  ++++|++|+.|+.|++||+...    +.+
T Consensus        67 sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~  146 (330)
T 2hes_X           67 RPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECI  146 (330)
T ss_dssp             CTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEE
T ss_pred             CCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEE
Confidence            3456789999999999999875432111222345567899999999999  7889999999999999999532    456


Q ss_pred             ehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC--eeeEEeecccccEEEEEEcCC----eEEEeecCCcEEEE
Q psy16373         78 FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG--ACMYSIQAHDGCIHALTYSDS----YVISLGQDERLCVW  151 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~--~~~~~~~~~~~~v~~i~~~~~----~l~~~~~d~~i~~w  151 (166)
                      ..+.+|...|.+++|+|++.++++++.|++|++||.+++  +++..+.+|...|.+++|+|+    .+++++.|+.|++|
T Consensus       147 ~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw  226 (330)
T 2hes_X          147 SVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVW  226 (330)
T ss_dssp             EEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEE
T ss_pred             EEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEE
Confidence            678889999999999999999999999999999999876  678889999999999999984    68999999999999


Q ss_pred             ECCcc
Q psy16373        152 DRFQG  156 (166)
Q Consensus       152 d~~~~  156 (166)
                      |++++
T Consensus       227 ~~~~~  231 (330)
T 2hes_X          227 KYMGD  231 (330)
T ss_dssp             EEEEE
T ss_pred             EecCC
Confidence            98765

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.96  E-value=1.9e-27  Score=166.20  Aligned_cols=150  Identities=19%  Similarity=0.252  Sum_probs=127.1

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cC-cEEEEEecCCeEEEEEcccccceehh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VS-NRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~-~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      +..+.+|++|+.|+.+++|+....       ..+..+.+|...|.+++|  ++ .+|++++.|+.|++||+++++....+
T Consensus       136 spdg~~l~sgs~d~~i~iwd~~~~-------~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~  208 (344)
T 4gqb_B          136 LSSGTQAVSGSKDICIKVWDLAQQ-------VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI  208 (344)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC
T ss_pred             CCCCCEEEEEeCCCeEEEEECCCC-------cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeee
Confidence            445778999999999999998643       245577899999999999  34 57899999999999999999887766


Q ss_pred             c--CCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC---eEEEeecCCcEEEEECC
Q psy16373         81 H--GHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS---YVISLGQDERLCVWDRF  154 (166)
Q Consensus        81 ~--~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~---~l~~~~~d~~i~~wd~~  154 (166)
                      .  .+...+.+++|+|+ +.++++|+.|+.|++||+++++++..+.+|...|++++|+|+   +|++++.|+.|++||++
T Consensus       209 ~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~  288 (344)
T 4gqb_B          209 GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSS  288 (344)
T ss_dssp             C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred             ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECC
Confidence            4  35567999999986 678899999999999999999999999999999999999983   68999999999999999


Q ss_pred             ccccee
Q psy16373        155 QGHLLS  160 (166)
Q Consensus       155 ~~~~~~  160 (166)
                      +++.+.
T Consensus       289 ~~~~~~  294 (344)
T 4gqb_B          289 LSELFR  294 (344)
T ss_dssp             CCEEEE
T ss_pred             CCcEEE
Confidence            887653

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.96  E-value=1.2e-26  Score=162.59  Aligned_cols=158  Identities=18%  Similarity=0.281  Sum_probs=136.5

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      ++.+..+++|+.|+.+.+|+......... ......+.+|...|.+++|  ++..|++++.|++|++||+++++.+..+.
T Consensus       115 sp~g~~lasg~~d~~i~v~~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~  193 (354)
T 2pbi_B          115 APSGCAIACGGLDNKCSVYPLTFDKNENM-AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH  193 (354)
T ss_dssp             CTTSSEEEEESTTSEEEEEECCCCTTCCS-GGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             CCCCCEEEEeeCCCCEEEEEEeccccccc-cccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc
Confidence            34567899999999999998754322111 1234456789999999999  77799999999999999999999999999


Q ss_pred             CCCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373         82 GHCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        82 ~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      +|...|.+++++|.  +..+++|+.|+.+++||+++++++..+.+|...|++++|+|  +.+++++.|+.|++||+++++
T Consensus       194 ~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~  273 (354)
T 2pbi_B          194 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR  273 (354)
T ss_dssp             CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred             CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence            99999999999874  68999999999999999999999999999999999999998  599999999999999999887


Q ss_pred             ceeee
Q psy16373        158 LLSTI  162 (166)
Q Consensus       158 ~~~~~  162 (166)
                      .+..+
T Consensus       274 ~~~~~  278 (354)
T 2pbi_B          274 EVAIY  278 (354)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            65544

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.96  E-value=8.8e-27  Score=166.15  Aligned_cols=153  Identities=19%  Similarity=0.334  Sum_probs=138.0

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      +.+..+++|+.|+.+++|+.....       ...++.+|...|.++.+  ++.+|++|+.|+.|++||+.+++....+.+
T Consensus       202 p~~~~l~s~s~D~~i~~wd~~~~~-------~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~  274 (410)
T 1vyh_C          202 PNGDHIVSASRDKTIKMWEVQTGY-------CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE  274 (410)
T ss_dssp             SSSSEEEEEETTSEEEEEETTTCC-------EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCc-------EEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecC
Confidence            345689999999999999986543       34467799999999999  788999999999999999999999889999


Q ss_pred             CCCceEEEEEcCC--------------------CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEE
Q psy16373         83 HCGPITTLFIDGV--------------------SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVI  140 (166)
Q Consensus        83 ~~~~v~~~~~~~~--------------------~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~  140 (166)
                      |...|.+++|+|+                    +.++++|+.|+.|++||++++.++..+.+|...|.+++|+|  .+|+
T Consensus       275 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~  354 (410)
T 1vyh_C          275 HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL  354 (410)
T ss_dssp             CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEE
T ss_pred             CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEE
Confidence            9999999999996                    56899999999999999999999999999999999999998  4899


Q ss_pred             EeecCCcEEEEECCcccceeeeee
Q psy16373        141 SLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       141 ~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      +++.|+.|++||+++++++.++..
T Consensus       355 s~s~D~~i~vwd~~~~~~~~~~~~  378 (410)
T 1vyh_C          355 SCADDKTLRVWDYKNKRCMKTLNA  378 (410)
T ss_dssp             EEETTTEEEEECCTTSCCCEEEEC
T ss_pred             EEeCCCeEEEEECCCCceEEEEcC
Confidence            999999999999999998887764

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.96  E-value=2.4e-26  Score=158.98  Aligned_cols=153  Identities=20%  Similarity=0.278  Sum_probs=134.7

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      +..+.++++|+.|+.+++|+....+       ....+.+|..+|.+++|  ++.+|++|+.|+.|++||++ ++.+..+.
T Consensus        74 s~dg~~l~s~s~D~~v~~wd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~  145 (319)
T 3frx_A           74 TADGAYALSASWDKTLRLWDVATGE-------TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLL  145 (319)
T ss_dssp             CTTSSEEEEEETTSEEEEEETTTTE-------EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEEC
T ss_pred             CCCCCEEEEEeCCCEEEEEECCCCC-------eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEe
Confidence            3456789999999999999986543       34467799999999999  78899999999999999997 55667788


Q ss_pred             CCCCceEEEEEcCC------CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEEC
Q psy16373         82 GHCGPITTLFIDGV------SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDR  153 (166)
Q Consensus        82 ~~~~~v~~~~~~~~------~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~  153 (166)
                      +|...|.++.+.|.      +..+++++.|+.|++||+++.+....+.+|...|.+++|+|  .+|++++.|+.|++||+
T Consensus       146 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~  225 (319)
T 3frx_A          146 GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNL  225 (319)
T ss_dssp             CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred             ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence            89999999999885      44899999999999999999999999999999999999998  48999999999999999


Q ss_pred             Ccccceeeeee
Q psy16373        154 FQGHLLSTIQL  164 (166)
Q Consensus       154 ~~~~~~~~~~~  164 (166)
                      ++++.+.++..
T Consensus       226 ~~~~~~~~~~~  236 (319)
T 3frx_A          226 AAKKAMYTLSA  236 (319)
T ss_dssp             TTTEEEEEEEC
T ss_pred             CCCcEEEEecC
Confidence            99988877654

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.95  E-value=4.5e-26  Score=158.92  Aligned_cols=155  Identities=20%  Similarity=0.254  Sum_probs=129.0

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      .+..|++|+.|+.+++|+....+...........+.+|..+|.+++|  ++.++++++.|+.|++||+++++.+..+.+|
T Consensus        38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h  117 (343)
T 2xzm_R           38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH  117 (343)
T ss_dssp             CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC
T ss_pred             CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence            56789999999999999986543322223445677899999999999  7889999999999999999999999999999


Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee---cccccEEEEEEcCC------------eEEEeecCCcE
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ---AHDGCIHALTYSDS------------YVISLGQDERL  148 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~---~~~~~v~~i~~~~~------------~l~~~~~d~~i  148 (166)
                      ...|.+++|+|++.++++++.|+.|++||+.... .....   .|...|.+++|+|+            ++++++.|+.|
T Consensus       118 ~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i  196 (343)
T 2xzm_R          118 QSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRL  196 (343)
T ss_dssp             CSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEE
T ss_pred             CCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEE
Confidence            9999999999999999999999999999997443 33332   68889999999873            69999999999


Q ss_pred             EEEECCcccceeee
Q psy16373        149 CVWDRFQGHLLSTI  162 (166)
Q Consensus       149 ~~wd~~~~~~~~~~  162 (166)
                      ++||. +.+....+
T Consensus       197 ~iwd~-~~~~~~~~  209 (343)
T 2xzm_R          197 KVWNT-NFQIRYTF  209 (343)
T ss_dssp             EEEET-TTEEEEEE
T ss_pred             EEEcC-CCceeEEE
Confidence            99994 34444443

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.95  E-value=4.1e-26  Score=158.97  Aligned_cols=149  Identities=14%  Similarity=0.195  Sum_probs=131.3

Q ss_pred             EEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCc
Q psy16373          9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP   86 (166)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~   86 (166)
                      .+++++.|+.+++|+.....       ....+.+|...|.+++|  ++.++++|+.|+.|++||+++++....+.+|...
T Consensus       156 ~l~s~s~d~~i~~wd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~  228 (340)
T 1got_B          156 QIVTSSGDTTCALWDIETGQ-------QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD  228 (340)
T ss_dssp             EEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSC
T ss_pred             cEEEEECCCcEEEEECCCCc-------EEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCC
Confidence            47889999999999976543       34467789999999999  7889999999999999999999999999999999


Q ss_pred             eEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec--ccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeee
Q psy16373         87 ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA--HDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus        87 v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~--~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      |.+++|+|++.++++++.|+.|++||+++++.+..+..  +...|.+++|+|  .++++++.|+.|++||+.+++.+..+
T Consensus       229 v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~  308 (340)
T 1got_B          229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVL  308 (340)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             EEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEe
Confidence            99999999999999999999999999999988777653  234799999998  48999999999999999998887776


Q ss_pred             ee
Q psy16373        163 QL  164 (166)
Q Consensus       163 ~~  164 (166)
                      ..
T Consensus       309 ~~  310 (340)
T 1got_B          309 AG  310 (340)
T ss_dssp             EC
T ss_pred             ec
Confidence            53

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.95  E-value=2.9e-26  Score=157.02  Aligned_cols=149  Identities=14%  Similarity=0.169  Sum_probs=126.4

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-c---CcEEEEEecCCeEEEEEccccc--ce
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-V---SNRVITGSQDHTLKVYKLEDQQ--LL   77 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~---~~~l~~~~~d~~v~v~~~~~~~--~~   77 (166)
                      ++.+..|++|+.|+.+++|+.....     .....++.+|..+|.+++| .   +++|++|+.|++|++||+++++  .+
T Consensus        18 s~~g~~las~s~D~~v~iw~~~~~~-----~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~   92 (297)
T 2pm7_B           18 DYYGKRMATCSSDKTIKIFEVEGET-----HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQI   92 (297)
T ss_dssp             CTTSSEEEEEETTSCEEEEEBCSSC-----BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCC
T ss_pred             CCCCCEEEEEeCCCEEEEEecCCCC-----cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEE
Confidence            4557789999999999999975321     1234577899999999999 2   6899999999999999998774  45


Q ss_pred             ehhcCCCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCCe--eeEEeecccccEEEEEEcCC---------------e
Q psy16373         78 FTLHGHCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTGA--CMYSIQAHDGCIHALTYSDS---------------Y  138 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~v~~i~~~~~---------------~  138 (166)
                      ..+.+|...|.+++|+|+  +.++++++.|+.+++||++++.  ....+.+|...|.+++|+|+               .
T Consensus        93 ~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~  172 (297)
T 2pm7_B           93 AVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK  172 (297)
T ss_dssp             EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCE
T ss_pred             EEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcce
Confidence            567789999999999997  8899999999999999998763  24567789999999999984               7


Q ss_pred             EEEeecCCcEEEEECCccc
Q psy16373        139 VISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       139 l~~~~~d~~i~~wd~~~~~  157 (166)
                      |++++.|+.|++||+++++
T Consensus       173 l~sgs~D~~v~lwd~~~~~  191 (297)
T 2pm7_B          173 FVTGGADNLVKIWKYNSDA  191 (297)
T ss_dssp             EEEEETTSCEEEEEEETTT
T ss_pred             EEEEcCCCcEEEEEEcCCC
Confidence            9999999999999998766

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.95  E-value=4.4e-26  Score=158.31  Aligned_cols=150  Identities=17%  Similarity=0.347  Sum_probs=119.6

Q ss_pred             EEEecCCCceEEEeecccccceeeceeeeeee-ec-cCCceEEEEe--cCcEEEEEecCCeEEEEEccc-------ccce
Q psy16373          9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVEST-RA-HHQPITVLEC--VSNRVITGSQDHTLKVYKLED-------QQLL   77 (166)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~-------~~~~   77 (166)
                      ++++|+.|+.+++|+......     .....+ .+ |..+|.+++|  ++++|++|+.|+.|++||+..       .+.+
T Consensus        26 ~las~~~D~~i~lw~~~~~~~-----~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~  100 (330)
T 2hes_X           26 ILATGSTDRKIKLVSVKYDDF-----TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLL  100 (330)
T ss_dssp             EEEEEESSSCEEEEECSSSCC-----EEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEE
T ss_pred             EEEEEcCCCEEEEEEecCCCe-----EEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeE
Confidence            899999999999999864321     122233 34 9999999999  788999999999999999953       3455


Q ss_pred             ehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC----CeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEE
Q psy16373         78 FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT----GACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVW  151 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~----~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~w  151 (166)
                      ..+.+|...|.+++|+|+++++++++.|++|++||++.    .+++..+.+|...|.+++|+|  .+|++++.|+.|++|
T Consensus       101 ~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW  180 (330)
T 2hes_X          101 AIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIW  180 (330)
T ss_dssp             EEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred             EEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEE
Confidence            67789999999999999999999999999999999953    256778889999999999998  489999999999999


Q ss_pred             ECCcc--cceeeee
Q psy16373        152 DRFQG--HLLSTIQ  163 (166)
Q Consensus       152 d~~~~--~~~~~~~  163 (166)
                      |.+++  +++..+.
T Consensus       181 ~~~~~~~~~~~~~~  194 (330)
T 2hes_X          181 KDYDDDWECVAVLN  194 (330)
T ss_dssp             EEETTEEEEEEEEC
T ss_pred             ECCCCCeeEEEEcc
Confidence            98765  4444443

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.95  E-value=1.1e-25  Score=157.79  Aligned_cols=151  Identities=15%  Similarity=0.188  Sum_probs=131.6

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe----cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC----VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      ....+++++.|+.+++|+.....       ....+.+|...|.++++    ++++|++|+.|+.|++||+++++.+..+.
T Consensus       165 ~~~~l~t~s~D~~v~lwd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~  237 (354)
T 2pbi_B          165 SDMQILTASGDGTCALWDVESGQ-------LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE  237 (354)
T ss_dssp             SSSEEEEEETTSEEEEEETTTCC-------EEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             CCCEEEEEeCCCcEEEEeCCCCe-------EEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence            34578999999999999986543       34567799999999998    35799999999999999999999999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc--cccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH--DGCIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~--~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      +|...|.+++|+|++..+++++.|+++++||+++.+.+..+..+  ...+.+++|+|  .++++++.|+.|++||+.+++
T Consensus       238 ~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~  317 (354)
T 2pbi_B          238 THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS  317 (354)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred             CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc
Confidence            99999999999999999999999999999999998877766543  34789999998  589999999999999999988


Q ss_pred             ceeeee
Q psy16373        158 LLSTIQ  163 (166)
Q Consensus       158 ~~~~~~  163 (166)
                      .+..+.
T Consensus       318 ~~~~l~  323 (354)
T 2pbi_B          318 RVSILF  323 (354)
T ss_dssp             EEEEEC
T ss_pred             eEEEEE
Confidence            777654

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.95  E-value=4.5e-26  Score=159.13  Aligned_cols=151  Identities=14%  Similarity=0.239  Sum_probs=127.6

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc--cceeh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ--QLLFT   79 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~--~~~~~   79 (166)
                      ++.+.+|++|+.|+.+++|+.......    .......+|...|.+++|  ++++|++|+.|+.+++|++..+  +.+..
T Consensus        25 sp~g~~las~~~D~~i~iw~~~~~~~~----~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~  100 (345)
T 3fm0_A           25 NPAGTLLASCGGDRRIRIWGTEGDSWI----CKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTT  100 (345)
T ss_dssp             CTTSSCEEEEETTSCEEEEEEETTEEE----EEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEE
T ss_pred             CCCCCEEEEEcCCCeEEEEEcCCCcce----eeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEE
Confidence            455678999999999999997543211    111223589999999999  7899999999999999999866  45678


Q ss_pred             hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC---eeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECC
Q psy16373         80 LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG---ACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRF  154 (166)
Q Consensus        80 ~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~---~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~  154 (166)
                      +.+|...|.+++|+|+++++++++.|+.|++||++++   ..+..+.+|...|.+++|+|  .+|++++.|+.|++||.+
T Consensus       101 ~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~  180 (345)
T 3fm0_A          101 LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREE  180 (345)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEE
T ss_pred             ccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEec
Confidence            8899999999999999999999999999999999866   34567788999999999998  589999999999999998


Q ss_pred             cccc
Q psy16373        155 QGHL  158 (166)
Q Consensus       155 ~~~~  158 (166)
                      +++.
T Consensus       181 ~~~~  184 (345)
T 3fm0_A          181 EDDW  184 (345)
T ss_dssp             TTEE
T ss_pred             CCCE
Confidence            7653

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.95  E-value=2.3e-26  Score=162.51  Aligned_cols=147  Identities=19%  Similarity=0.273  Sum_probs=126.9

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      .+..+++|+.|+.+++|+.....      .....+.+|...|.+++|  ++.+|++|+.|+.|++||+++++.+..+..+
T Consensus       217 ~~~~l~sgs~D~~v~~wd~~~~~------~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~  290 (380)
T 3iz6_a          217 NANMFISGSCDTTVRLWDLRITS------RAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNRE  290 (380)
T ss_dssp             SCCEEEEEETTSCEEEEETTTTC------CCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCC
T ss_pred             CCCEEEEEECCCeEEEEECCCCC------cceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccc
Confidence            46789999999999999986432      234467799999999999  7889999999999999999998877666543


Q ss_pred             C-------CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe----ecccccEEEEEEcC--CeEEEeecCCcEEE
Q psy16373         84 C-------GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI----QAHDGCIHALTYSD--SYVISLGQDERLCV  150 (166)
Q Consensus        84 ~-------~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~----~~~~~~v~~i~~~~--~~l~~~~~d~~i~~  150 (166)
                      .       ..|.+++|+|++.++++|+.||.|++||+.+++.+..+    .+|.+.|++++|+|  .+|++++.|+.|++
T Consensus       291 ~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~i  370 (380)
T 3iz6_a          291 PDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKI  370 (380)
T ss_dssp             CSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEE
T ss_pred             ccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEE
Confidence            2       34899999999999999999999999999999888777    67899999999998  49999999999999


Q ss_pred             EECCcccc
Q psy16373        151 WDRFQGHL  158 (166)
Q Consensus       151 wd~~~~~~  158 (166)
                      |++...+.
T Consensus       371 W~~~~~~~  378 (380)
T 3iz6_a          371 WAFSGHRK  378 (380)
T ss_dssp             EECCSSSS
T ss_pred             EecCCCcc
Confidence            99987654

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.95  E-value=9.3e-26  Score=168.00  Aligned_cols=160  Identities=16%  Similarity=0.247  Sum_probs=134.6

Q ss_pred             ccceEEEEecCCCceEEEeeccccccee---ec------------------------------------eeeeeeeeccC
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMT---LT------------------------------------CCKVESTRAHH   44 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------------------------~~~~~~~~~~~   44 (166)
                      ++.+.++++|+.|+.+++|+........   ..                                    ......+.+|.
T Consensus        68 spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~  147 (611)
T 1nr0_A           68 SPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQA  147 (611)
T ss_dssp             CTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCS
T ss_pred             CCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCC
Confidence            5667899999999999999974211100   00                                    00122456889


Q ss_pred             CceEEEEe--cCc-EEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373         45 QPITVLEC--VSN-RVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS  121 (166)
Q Consensus        45 ~~i~~~~~--~~~-~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~  121 (166)
                      ..|.+++|  ++. .|++|+.|+.|++||..+++....+.+|...|.+++|+|++.++++++.|++|++||+++++.+..
T Consensus       148 ~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~  227 (611)
T 1nr0_A          148 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGV  227 (611)
T ss_dssp             SCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred             CCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeee
Confidence            99999999  443 699999999999999999988889999999999999999999999999999999999999998888


Q ss_pred             ee-------cccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373        122 IQ-------AHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       122 ~~-------~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      +.       +|.+.|.+++|+|  .+|++++.|+.|++||+++++.+.++.
T Consensus       228 ~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~  278 (611)
T 1nr0_A          228 FEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIP  278 (611)
T ss_dssp             CBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             eccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeec
Confidence            74       7999999999998  489999999999999999998877664

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.95  E-value=3.3e-25  Score=152.40  Aligned_cols=153  Identities=22%  Similarity=0.409  Sum_probs=134.8

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      +..+..+++|+.++.+++|+.....       ....+.+|...|.+++|  ++++|++|+.|+.|++||+++++.+..+.
T Consensus        74 ~~~~~~l~s~~~d~~i~vwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~  146 (312)
T 4ery_A           74 SSDSNLLVSASDDKTLKIWDVSSGK-------CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP  146 (312)
T ss_dssp             CTTSSEEEEEETTSEEEEEETTTCC-------EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             cCCCCEEEEECCCCEEEEEECCCCc-------EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec
Confidence            3456789999999999999976543       34467789999999999  78899999999999999999999999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee-cccccEEEEEEcC--CeEEEeecCCcEEEEECCcccc
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ-AHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~-~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      .|..+|.+++|+|++.++++++.|+.+++||+++++.+..+. .+..++..++|+|  .++++++.|+.|++||+++++.
T Consensus       147 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  226 (312)
T 4ery_A          147 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC  226 (312)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE
T ss_pred             CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcE
Confidence            999999999999999999999999999999999998887764 4566899999998  4899999999999999999988


Q ss_pred             eeeee
Q psy16373        159 LSTIQ  163 (166)
Q Consensus       159 ~~~~~  163 (166)
                      +..+.
T Consensus       227 ~~~~~  231 (312)
T 4ery_A          227 LKTYT  231 (312)
T ss_dssp             EEEEC
T ss_pred             EEEEE
Confidence            77664

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.95  E-value=8.4e-26  Score=157.75  Aligned_cols=147  Identities=15%  Similarity=0.263  Sum_probs=126.4

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccc---cee
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ---LLF   78 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~---~~~   78 (166)
                      ++.+..|++|+.|+.+++|+.....     ......+.+|..+|.+++|  ++++|++|+.|+.|++||+.++.   .+.
T Consensus        70 sp~g~~l~s~s~D~~v~iw~~~~~~-----~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~  144 (345)
T 3fm0_A           70 SPCGNYLASASFDATTCIWKKNQDD-----FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVS  144 (345)
T ss_dssp             CTTSSEEEEEETTSCEEEEEECCC------EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred             CCCCCEEEEEECCCcEEEEEccCCC-----eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEE
Confidence            3456789999999999999875432     2234567899999999999  78999999999999999998753   455


Q ss_pred             hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe--eeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECC
Q psy16373         79 TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA--CMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRF  154 (166)
Q Consensus        79 ~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~  154 (166)
                      .+.+|...|.+++|+|++.++++++.|+.+++||.++++  +...+.+|...|++++|+|  .+|++++.|+.|++||..
T Consensus       145 ~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~  224 (345)
T 3fm0_A          145 VLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY  224 (345)
T ss_dssp             EECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred             EecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence            677899999999999999999999999999999998775  4567889999999999998  489999999999999974


Q ss_pred             c
Q psy16373        155 Q  155 (166)
Q Consensus       155 ~  155 (166)
                      .
T Consensus       225 ~  225 (345)
T 3fm0_A          225 L  225 (345)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.95  E-value=1.2e-26  Score=163.98  Aligned_cols=160  Identities=19%  Similarity=0.242  Sum_probs=134.3

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      ++.+..+++|+.|+.+++|+................+.+|...|.++.|   .+..|++|+.|+.|++||+.+++.+..+
T Consensus       117 s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~  196 (380)
T 3iz6_a          117 APNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIF  196 (380)
T ss_dssp             CTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEE
T ss_pred             CCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEe
Confidence            4456789999999999999986533222222334467799999999999   3567999999999999999998877655


Q ss_pred             -----cCCCCceEEEEEcC-CCCEEEEecCCCcEEEEeCc-CCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEE
Q psy16373         81 -----HGHCGPITTLFIDG-VSMMSGSGSQDGLLCVWDTV-TGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVW  151 (166)
Q Consensus        81 -----~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~-~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~w  151 (166)
                           .+|...|.++++++ ++.++++|+.|+.|++||++ ..+.+..+.+|...|++++|+|  .++++++.|+.|++|
T Consensus       197 ~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lw  276 (380)
T 3iz6_a          197 GSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLF  276 (380)
T ss_dssp             CCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEE
T ss_pred             ecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEE
Confidence                 57899999999977 68999999999999999998 5577888999999999999998  489999999999999


Q ss_pred             ECCcccceeeee
Q psy16373        152 DRFQGHLLSTIQ  163 (166)
Q Consensus       152 d~~~~~~~~~~~  163 (166)
                      |+++++.+..+.
T Consensus       277 d~~~~~~~~~~~  288 (380)
T 3iz6_a          277 DMRTGHQLQVYN  288 (380)
T ss_dssp             ETTTTEEEEEEC
T ss_pred             ECCCCcEEEEec
Confidence            999998876654

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.94  E-value=7.6e-26  Score=158.73  Aligned_cols=146  Identities=13%  Similarity=0.064  Sum_probs=121.5

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      ...+++++.|+.+++|+.......     .......|...+.+++|   .+.+|++|+.|+.|++||+++++.+..+.+|
T Consensus       194 ~~~~~s~~~dg~v~~wd~~~~~~~-----~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~  268 (357)
T 4g56_B          194 DTIFLSCGEDGRILLWDTRKPKPA-----TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVH  268 (357)
T ss_dssp             SSCEEEEETTSCEEECCTTSSSCB-----CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCC
T ss_pred             CceeeeeccCCceEEEECCCCcee-----eeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecc
Confidence            357889999999999998654321     11233457788999999   3568999999999999999999999999999


Q ss_pred             CCceEEEEEcCCC-CEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCcccc
Q psy16373         84 CGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus        84 ~~~v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      ...|.+++|+|++ .++++++.|++|++||+++++.+..+ +|.+.|++++|+|   .+|++++.|+.|++||+.+...
T Consensus       269 ~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~  346 (357)
T 4g56_B          269 SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR  346 (357)
T ss_dssp             SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred             ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence            9999999999986 67899999999999999999877655 6999999999997   3899999999999999976443

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.94  E-value=2.8e-25  Score=157.71  Aligned_cols=152  Identities=20%  Similarity=0.314  Sum_probs=131.5

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc-------cce
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ-------QLL   77 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~-------~~~   77 (166)
                      ..+++++.++.+.+|+.......   ......+.+|..+|.+++|   ++++|++|+.|+.|++||+.++       +.+
T Consensus        48 ~~~~~~~~~g~i~v~~~~~~~~~---~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~  124 (402)
T 2aq5_A           48 ALICEASGGGAFLVLPLGKTGRV---DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPV  124 (402)
T ss_dssp             EEEBCCSSSCCEEEEETTCCEEC---CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCS
T ss_pred             EEEEEEcCCCEEEEEECccCCCC---CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCce
Confidence            45556888999999997543321   1233456789999999999   5689999999999999999987       567


Q ss_pred             ehhcCCCCceEEEEEcCCC-CEEEEecCCCcEEEEeCcCCeeeEEe--ecccccEEEEEEcC--CeEEEeecCCcEEEEE
Q psy16373         78 FTLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSI--QAHDGCIHALTYSD--SYVISLGQDERLCVWD  152 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~~~~~--~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd  152 (166)
                      ..+.+|...|.+++|+|++ ..+++++.|+.|++||+++++.+..+  ..|...|.+++|+|  ..+++++.|+.|++||
T Consensus       125 ~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd  204 (402)
T 2aq5_A          125 ITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIE  204 (402)
T ss_dssp             EEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEE
T ss_pred             EEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEe
Confidence            7888999999999999997 79999999999999999999999999  78999999999998  5899999999999999


Q ss_pred             CCcccceeee
Q psy16373        153 RFQGHLLSTI  162 (166)
Q Consensus       153 ~~~~~~~~~~  162 (166)
                      +++++.+..+
T Consensus       205 ~~~~~~~~~~  214 (402)
T 2aq5_A          205 PRKGTVVAEK  214 (402)
T ss_dssp             TTTTEEEEEE
T ss_pred             CCCCceeeee
Confidence            9999888776

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.94  E-value=6.5e-25  Score=158.18  Aligned_cols=158  Identities=25%  Similarity=0.340  Sum_probs=138.3

Q ss_pred             ceEEEEecCCCceEEEeecccccceeece----------------eeeeeeeccCCceEEEEecCcEEEEEecCCeEEEE
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTC----------------CKVESTRAHHQPITVLECVSNRVITGSQDHTLKVY   69 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~   69 (166)
                      .+..+++|+.++.+++|+...........                .....+.+|...+.++..+++++++++.|+.|++|
T Consensus       216 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vw  295 (464)
T 3v7d_B          216 NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVW  295 (464)
T ss_dssp             SCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEE
T ss_pred             CCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEE
Confidence            45789999999999999986543221100                02445678999999998899999999999999999


Q ss_pred             EcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEE
Q psy16373         70 KLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLC  149 (166)
Q Consensus        70 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~  149 (166)
                      |+.+++.+..+.+|...|.+++++|++..+++++.|+.|++||+++++++..+.+|...|.++.|+++++++++.|+.|+
T Consensus       296 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~  375 (464)
T 3v7d_B          296 DVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIR  375 (464)
T ss_dssp             ETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEETTSEEE
T ss_pred             ECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEECCcccceeeee
Q psy16373        150 VWDRFQGHLLSTIQ  163 (166)
Q Consensus       150 ~wd~~~~~~~~~~~  163 (166)
                      +||++++.....+.
T Consensus       376 vwd~~~~~~~~~~~  389 (464)
T 3v7d_B          376 GWDANDYSRKFSYH  389 (464)
T ss_dssp             EEETTTCCEEEEEE
T ss_pred             EEECCCCceeeeec
Confidence            99999887665543

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.94  E-value=3.6e-25  Score=164.86  Aligned_cols=146  Identities=16%  Similarity=0.151  Sum_probs=126.6

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc----
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH----   81 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~----   81 (166)
                      ..+++|+.|+.+++|+....       ....++.+|...|.+++|  ++++|++++.|+.|++||+.+++.+..+.    
T Consensus       161 ~~l~s~s~D~~v~lwd~~~~-------~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~  233 (611)
T 1nr0_A          161 FRIISGSDDNTVAIFEGPPF-------KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSL  233 (611)
T ss_dssp             CEEEEEETTSCEEEEETTTB-------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTS
T ss_pred             eEEEEEeCCCeEEEEECCCC-------eEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccc
Confidence            47999999999999986432       234567899999999999  88999999999999999999888777663    


Q ss_pred             ---CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE-------------------------------------
Q psy16373         82 ---GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS-------------------------------------  121 (166)
Q Consensus        82 ---~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~-------------------------------------  121 (166)
                         +|...|.+++|+|++.++++++.|++|++||+++++.+..                                     
T Consensus       234 ~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~  313 (611)
T 1nr0_A          234 KNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPEL  313 (611)
T ss_dssp             SSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTT
T ss_pred             cccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCC
Confidence               7999999999999999999999999999999987765433                                     


Q ss_pred             ------eecccccEEEEEEcC--CeEEEeecCCcEEEEECCccccee
Q psy16373        122 ------IQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus       122 ------~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                            +.+|...|++++|+|  .+|++++.|+.|++||+.+++...
T Consensus       314 ~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~  360 (611)
T 1nr0_A          314 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNR  360 (611)
T ss_dssp             TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred             CCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceee
Confidence                  346888999999998  499999999999999999876544

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.94  E-value=2e-25  Score=156.58  Aligned_cols=157  Identities=17%  Similarity=0.214  Sum_probs=121.4

Q ss_pred             ccceEEEEecCC------CceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccc
Q psy16373          4 SVHRIHLRTGSA------GSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQL   76 (166)
Q Consensus         4 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~   76 (166)
                      ++.+.+|++|+.      |+.+.+|+........   .......+|...|.+++| ..+.+++++.|+.|++||+.+++.
T Consensus        51 SpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~---~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~  127 (357)
T 4g56_B           51 RRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNE---SLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKES  127 (357)
T ss_dssp             CSSSCEEEEEECSSSSSCCEEEEEESSCC---CG---GGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC-------
T ss_pred             CCCCCEEEEEcCCCCccccCeEEEEECCCCCcce---eEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccce
Confidence            566788999987      5667777654332111   122234578889999999 556778889999999999998765


Q ss_pred             eeh----hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC---CeEEEeecCCcEE
Q psy16373         77 LFT----LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD---SYVISLGQDERLC  149 (166)
Q Consensus        77 ~~~----~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~  149 (166)
                      ...    ..+|...|.+++|+|+++++++++.|+.|++||+++++.+..+.+|...|++++|++   ..+++++.|+.|+
T Consensus       128 ~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~  207 (357)
T 4g56_B          128 LLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRIL  207 (357)
T ss_dssp             -CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEE
T ss_pred             eEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceE
Confidence            432    347899999999999999999999999999999999999999999999999999987   3789999999999


Q ss_pred             EEECCcccceeeee
Q psy16373        150 VWDRFQGHLLSTIQ  163 (166)
Q Consensus       150 ~wd~~~~~~~~~~~  163 (166)
                      +||+++++++..+.
T Consensus       208 ~wd~~~~~~~~~~~  221 (357)
T 4g56_B          208 LWDTRKPKPATRID  221 (357)
T ss_dssp             ECCTTSSSCBCBCC
T ss_pred             EEECCCCceeeeee
Confidence            99999988776544

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.94  E-value=8.8e-25  Score=149.68  Aligned_cols=145  Identities=14%  Similarity=0.236  Sum_probs=122.5

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c--CcEEEEEecCCeEEEEEcccccc--eehh
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V--SNRVITGSQDHTLKVYKLEDQQL--LFTL   80 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~--~~~l~~~~~d~~v~v~~~~~~~~--~~~~   80 (166)
                      +..|++|+.|+.+++|+.....     ......+.+|...|.+++|  +  +.+|++++.|+.|++||+++...  ...+
T Consensus        67 g~~l~s~s~D~~v~iWd~~~~~-----~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~  141 (297)
T 2pm7_B           67 GTILASCSYDGKVMIWKEENGR-----WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIII  141 (297)
T ss_dssp             CSEEEEEETTTEEEEEEBSSSC-----BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEE
T ss_pred             CCEEEEEcCCCEEEEEEcCCCc-----eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeee
Confidence            5689999999999999986432     1223356689999999999  3  67999999999999999987632  3456


Q ss_pred             cCCCCceEEEEEcCC-------------CCEEEEecCCCcEEEEeCcCCe----eeEEeecccccEEEEEEcCC-----e
Q psy16373         81 HGHCGPITTLFIDGV-------------SMMSGSGSQDGLLCVWDTVTGA----CMYSIQAHDGCIHALTYSDS-----Y  138 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~-------------~~~~~~~~~d~~v~~~d~~~~~----~~~~~~~~~~~v~~i~~~~~-----~  138 (166)
                      .+|...|.+++|+|+             ++++++|+.|+.|++||+++++    ....+.+|...|.+++|+|+     +
T Consensus       142 ~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~  221 (297)
T 2pm7_B          142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY  221 (297)
T ss_dssp             ECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred             ecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceE
Confidence            789999999999996             4699999999999999998765    56678899999999999984     7


Q ss_pred             EEEeecCCcEEEEECCcc
Q psy16373        139 VISLGQDERLCVWDRFQG  156 (166)
Q Consensus       139 l~~~~~d~~i~~wd~~~~  156 (166)
                      |++++.|+.|++||++++
T Consensus       222 las~s~D~~v~iWd~~~~  239 (297)
T 2pm7_B          222 MASVSQDRTCIIWTQDNE  239 (297)
T ss_dssp             EEEEETTSCEEEEEESST
T ss_pred             EEEEECCCcEEEEEeCCC
Confidence            999999999999999774

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.94  E-value=9.2e-25  Score=164.64  Aligned_cols=156  Identities=15%  Similarity=0.179  Sum_probs=132.3

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      ..++++|+.|+.+++|+.......  .......+.+|...|.+++|  ++++|++|+.|+.|++||+.+++....+.+|.
T Consensus       395 ~~~l~s~s~D~~i~~W~~~~~~~~--~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~  472 (694)
T 3dm0_A          395 ADIIVSASRDKSIILWKLTKDDKA--YGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHT  472 (694)
T ss_dssp             CSEEEEEETTSEEEEEECCCSTTC--SCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred             CCEEEEEeCCCcEEEEEccCCCcc--cccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCC
Confidence            458999999999999998654321  12234567899999999999  88999999999999999999999999999999


Q ss_pred             CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe---ecccccEEEEEEcCC----eEEEeecCCcEEEEECCccc
Q psy16373         85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI---QAHDGCIHALTYSDS----YVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~---~~~~~~v~~i~~~~~----~l~~~~~d~~i~~wd~~~~~  157 (166)
                      ..|.+++|+|++..+++++.|++|++||..........   .+|...|.+++|+|+    .+++++.|+.|++||+++++
T Consensus       473 ~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~  552 (694)
T 3dm0_A          473 KDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK  552 (694)
T ss_dssp             SCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC
T ss_pred             CCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc
Confidence            99999999999999999999999999998755433322   468889999999983    69999999999999999988


Q ss_pred             ceeeeee
Q psy16373        158 LLSTIQL  164 (166)
Q Consensus       158 ~~~~~~~  164 (166)
                      ....+..
T Consensus       553 ~~~~~~~  559 (694)
T 3dm0_A          553 LRSTLAG  559 (694)
T ss_dssp             EEEEECC
T ss_pred             EEEEEcC
Confidence            7766643

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.94  E-value=4e-25  Score=156.73  Aligned_cols=151  Identities=17%  Similarity=0.212  Sum_probs=122.9

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc---------
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ---------   74 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~---------   74 (166)
                      .+..+++|+.|+.+++|+..................+|...|.+++|  ++.+|++|+.|+.|++||+++.         
T Consensus       218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~  297 (393)
T 1erj_A          218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP  297 (393)
T ss_dssp             TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred             CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence            56789999999999999976543211111111223579999999999  7889999999999999999763         


Q ss_pred             ---cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--------CeEEEee
Q psy16373         75 ---QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--------SYVISLG  143 (166)
Q Consensus        75 ---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--------~~l~~~~  143 (166)
                         .....+.+|...|.+++++|++.++++++.|+.|++||+++++++..+.+|...|.+++|++        +.+++++
T Consensus       298 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs  377 (393)
T 1erj_A          298 NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS  377 (393)
T ss_dssp             ---CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred             CCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEEC
Confidence               23445678999999999999999999999999999999999999999999999999999975        3799999


Q ss_pred             cCCcEEEEECCcc
Q psy16373        144 QDERLCVWDRFQG  156 (166)
Q Consensus       144 ~d~~i~~wd~~~~  156 (166)
                      .|+.|++|+++..
T Consensus       378 ~Dg~i~iW~~~~~  390 (393)
T 1erj_A          378 GDCKARIWKYKKI  390 (393)
T ss_dssp             TTSEEEEEEEEEC
T ss_pred             CCCcEEECccccc
Confidence            9999999998654

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.94  E-value=6.7e-26  Score=156.52  Aligned_cols=148  Identities=16%  Similarity=0.190  Sum_probs=124.3

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-c---CcEEEEEecCCeEEEEEccccc--ce
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-V---SNRVITGSQDHTLKVYKLEDQQ--LL   77 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~---~~~l~~~~~d~~v~v~~~~~~~--~~   77 (166)
                      ++.+..|++|+.|+.+++|+.....     ......+.+|..+|.+++| .   +++|++|+.|++|++||+++++  ..
T Consensus        22 s~~g~~lasgs~D~~v~lwd~~~~~-----~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~   96 (316)
T 3bg1_A           22 DYYGTRLATCSSDRSVKIFDVRNGG-----QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKS   96 (316)
T ss_dssp             CGGGCEEEEEETTTEEEEEEEETTE-----EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEE
T ss_pred             cCCCCEEEEEeCCCeEEEEEecCCC-----cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEE
Confidence            4557789999999999999976432     1234567899999999999 2   6899999999999999998863  55


Q ss_pred             ehhcCCCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCCe---eeEEeecccccEEEEEEcCC---------------
Q psy16373         78 FTLHGHCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTGA---CMYSIQAHDGCIHALTYSDS---------------  137 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~---~~~~~~~~~~~v~~i~~~~~---------------  137 (166)
                      ..+.+|...|.+++|+|+  +.++++++.|+.+++||++.+.   ....+.+|...|.+++|+|+               
T Consensus        97 ~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~  176 (316)
T 3bg1_A           97 HEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKP  176 (316)
T ss_dssp             EEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCC
T ss_pred             EEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCc
Confidence            667789999999999998  7899999999999999998753   23455678889999999874               


Q ss_pred             ----eEEEeecCCcEEEEECCcc
Q psy16373        138 ----YVISLGQDERLCVWDRFQG  156 (166)
Q Consensus       138 ----~l~~~~~d~~i~~wd~~~~  156 (166)
                          .|++++.|+.|++||++.+
T Consensus       177 ~~~~~l~sgs~D~~v~lWd~~~~  199 (316)
T 3bg1_A          177 NYIKRFASGGCDNLIKLWKEEED  199 (316)
T ss_dssp             CCCCBEECCBTTSBCCEEEECTT
T ss_pred             cccceEEEecCCCeEEEEEeCCC
Confidence                7999999999999999754

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.94  E-value=7e-25  Score=154.28  Aligned_cols=146  Identities=14%  Similarity=0.064  Sum_probs=121.9

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCC----eEEEEEcccccc-
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDH----TLKVYKLEDQQL-   76 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~----~v~v~~~~~~~~-   76 (166)
                      ++.+.++++++.++++++|......      .......+|...|.+++|  ++..+++++.|+    .+++|++..... 
T Consensus       185 spdg~~l~s~s~~~~~~~~~~~~~~------~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~  258 (365)
T 4h5i_A          185 STDGKVVAYITGSSLEVISTVTGSC------IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTS  258 (365)
T ss_dssp             CTTSSEEEEECSSCEEEEETTTCCE------EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEE
T ss_pred             ccCCceEEeccceeEEEEEeccCcc------eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceec
Confidence            4567788999988888887754332      122234578889999999  888999999887    688899876532 


Q ss_pred             ---eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe-ecccccEEEEEEcC--CeEEEeecCCcEEE
Q psy16373         77 ---LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI-QAHDGCIHALTYSD--SYVISLGQDERLCV  150 (166)
Q Consensus        77 ---~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~v~~i~~~~--~~l~~~~~d~~i~~  150 (166)
                         ...+.+|...|++++|+|+++++++|+.|++|++||+++++++..+ .+|..+|++++|+|  .+|++++.|++|++
T Consensus       259 ~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrv  338 (365)
T 4h5i_A          259 VLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHI  338 (365)
T ss_dssp             EEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred             ceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence               3456789999999999999999999999999999999999999885 78999999999999  49999999999999


Q ss_pred             EECCc
Q psy16373        151 WDRFQ  155 (166)
Q Consensus       151 wd~~~  155 (166)
                      ||+..
T Consensus       339 w~ip~  343 (365)
T 4h5i_A          339 IKLPL  343 (365)
T ss_dssp             EECCT
T ss_pred             EEcCC
Confidence            99854

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.94  E-value=2.1e-24  Score=149.13  Aligned_cols=157  Identities=12%  Similarity=0.198  Sum_probs=129.4

Q ss_pred             eEEEEecCCCceEEEeeccccccee--eceeeeeeeeccCCceEEEEe--c--CcEEEEEecCCeEEEEEcccccc----
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMT--LTCCKVESTRAHHQPITVLEC--V--SNRVITGSQDHTLKVYKLEDQQL----   76 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~--~--~~~l~~~~~d~~v~v~~~~~~~~----   76 (166)
                      +..+++|+.|+.+++|+........  ........+.+|..+|.+++|  +  +++|++++.|+.|++||+++++.    
T Consensus        71 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~  150 (351)
T 3f3f_A           71 GRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSW  150 (351)
T ss_dssp             CSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCC
T ss_pred             CCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccc
Confidence            6789999999999999986543211  111345567789999999999  5  88999999999999999875432    


Q ss_pred             --------------------------------------------------------eehhcCCCCceEEEEEcCCC----
Q psy16373         77 --------------------------------------------------------LFTLHGHCGPITTLFIDGVS----   96 (166)
Q Consensus        77 --------------------------------------------------------~~~~~~~~~~v~~~~~~~~~----   96 (166)
                                                                              +..+.+|...|.+++|+|++    
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~  230 (351)
T 3f3f_A          151 TLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWY  230 (351)
T ss_dssp             EEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSS
T ss_pred             cccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcc
Confidence                                                                    33455788999999999998    


Q ss_pred             CEEEEecCCCcEEEEeCcCC----------------------------------------------eeeEEeecccccEE
Q psy16373         97 MMSGSGSQDGLLCVWDTVTG----------------------------------------------ACMYSIQAHDGCIH  130 (166)
Q Consensus        97 ~~~~~~~~d~~v~~~d~~~~----------------------------------------------~~~~~~~~~~~~v~  130 (166)
                      .++++++.||.|++||++++                                              +.+..+.+|...|+
T Consensus       231 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~  310 (351)
T 3f3f_A          231 QLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVW  310 (351)
T ss_dssp             EEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEE
T ss_pred             eEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEE
Confidence            89999999999999999875                                              56777888999999


Q ss_pred             EEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373        131 ALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       131 ~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      +++|+|  .+|++++.|+.|++||+.+++.+..+.
T Consensus       311 ~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~  345 (351)
T 3f3f_A          311 SVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS  345 (351)
T ss_dssp             EEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred             EEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence            999998  489999999999999999887665544

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.93  E-value=2.1e-24  Score=153.11  Aligned_cols=145  Identities=22%  Similarity=0.358  Sum_probs=123.9

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      ..+..+++|+.|+.+++|+.....       ....+.+|...|.+++|  ++++|++++.|+.|++||+++++....+. 
T Consensus       133 ~dg~~l~s~~~d~~i~iwd~~~~~-------~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-  204 (393)
T 1erj_A          133 PDGKFLATGAEDRLIRIWDIENRK-------IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-  204 (393)
T ss_dssp             TTSSEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-
T ss_pred             CCCCEEEEEcCCCeEEEEECCCCc-------EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-
Confidence            456789999999999999976432       34467799999999999  78899999999999999999988776665 


Q ss_pred             CCCceEEEEEcC-CCCEEEEecCCCcEEEEeCcCCeeeEEe-------ecccccEEEEEEcC--CeEEEeecCCcEEEEE
Q psy16373         83 HCGPITTLFIDG-VSMMSGSGSQDGLLCVWDTVTGACMYSI-------QAHDGCIHALTYSD--SYVISLGQDERLCVWD  152 (166)
Q Consensus        83 ~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~~~~~~~-------~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd  152 (166)
                      +...+.+++++| ++.++++++.|+.|++||+++++.+..+       .+|...|.+++|+|  ..+++++.|+.|++||
T Consensus       205 ~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd  284 (393)
T 1erj_A          205 IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN  284 (393)
T ss_dssp             CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence            567899999999 7999999999999999999999877766       56889999999998  4899999999999999


Q ss_pred             CCccc
Q psy16373        153 RFQGH  157 (166)
Q Consensus       153 ~~~~~  157 (166)
                      +++..
T Consensus       285 ~~~~~  289 (393)
T 1erj_A          285 LQNAN  289 (393)
T ss_dssp             C----
T ss_pred             CCCCC
Confidence            98643

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.93  E-value=2.9e-24  Score=152.57  Aligned_cols=153  Identities=17%  Similarity=0.353  Sum_probs=134.4

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcc-cccceehhcCC
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLE-DQQLLFTLHGH   83 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~-~~~~~~~~~~~   83 (166)
                      ..+..+++|+.++.+.+|+.....       ....+.+|...|.+++|+++.+++++.|+.|++||++ .......+.+|
T Consensus       144 ~~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  216 (401)
T 4aez_A          144 HDGSFLSVGLGNGLVDIYDVESQT-------KLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGH  216 (401)
T ss_dssp             TTSSEEEEEETTSCEEEEETTTCC-------EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred             CCCCEEEEECCCCeEEEEECcCCe-------EEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCC
Confidence            356688999999999999976443       3445678999999999999999999999999999998 45667788899


Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC---CeEEEee--cCCcEEEEECCcccc
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD---SYVISLG--QDERLCVWDRFQGHL  158 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~--~d~~i~~wd~~~~~~  158 (166)
                      ...|.+++|+|++.++++++.|+.|++||+++++++..+..|...|.+++|+|   ..+++++  .|+.|++||+++++.
T Consensus       217 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~  296 (401)
T 4aez_A          217 SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR  296 (401)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE
T ss_pred             CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE
Confidence            99999999999999999999999999999999999999999999999999998   3666655  699999999999998


Q ss_pred             eeeeee
Q psy16373        159 LSTIQL  164 (166)
Q Consensus       159 ~~~~~~  164 (166)
                      +..+..
T Consensus       297 ~~~~~~  302 (401)
T 4aez_A          297 VNTVDA  302 (401)
T ss_dssp             EEEEEC
T ss_pred             EEEEeC
Confidence            887754

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.93  E-value=4.7e-25  Score=156.87  Aligned_cols=152  Identities=21%  Similarity=0.271  Sum_probs=129.9

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      ..+..+++|+.++.+++|+.....       ....+.+|...|.+++|  ++++|++++.|+.|++||+.+++.+..+.+
T Consensus       107 ~~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~  179 (420)
T 3vl1_A          107 LQMRRFILGTTEGDIKVLDSNFNL-------QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG  179 (420)
T ss_dssp             SSSCEEEEEETTSCEEEECTTSCE-------EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC
T ss_pred             cCCCEEEEEECCCCEEEEeCCCcc-------eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC
Confidence            456689999999999999976432       23345689999999999  788999999999999999999999999999


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec---ccccEEEEEE---------------------cC--
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA---HDGCIHALTY---------------------SD--  136 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~---~~~~v~~i~~---------------------~~--  136 (166)
                      |...|.+++|+|++..+++++.|+.+++||+++++.+..+..   +...+.+++|                     +|  
T Consensus       180 h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  259 (420)
T 3vl1_A          180 HRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG  259 (420)
T ss_dssp             CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT
T ss_pred             CCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC
Confidence            999999999999999999999999999999999999888875   3345555554                     55  


Q ss_pred             CeEEEeecCCcEEEEECCcccceeeee
Q psy16373        137 SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       137 ~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      .++++++.|+.|++||+++++.+..+.
T Consensus       260 ~~l~~~~~dg~i~i~d~~~~~~~~~~~  286 (420)
T 3vl1_A          260 KYVIAGHVSGVITVHNVFSKEQTIQLP  286 (420)
T ss_dssp             EEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             CEEEEEcCCCeEEEEECCCCceeEEcc
Confidence            389999999999999999988776653

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.93  E-value=4e-25  Score=158.59  Aligned_cols=151  Identities=16%  Similarity=0.174  Sum_probs=121.6

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc---------
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ---------   74 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~---------   74 (166)
                      +.+|++|+.|+.|++|+......     .....+.+|..+|++++|   ++++|++|+.|++|++||++++         
T Consensus       132 ~~~lasGs~dg~i~lWd~~~~~~-----~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~  206 (435)
T 4e54_B          132 PSTVAVGSKGGDIMLWNFGIKDK-----PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSD  206 (435)
T ss_dssp             TTCEEEEETTSCEEEECSSCCSC-----CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCS
T ss_pred             CCEEEEEeCCCEEEEEECCCCCc-----eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccC
Confidence            45799999999999999865431     223345689999999999   4679999999999999998632         


Q ss_pred             ----------------------------------cceehhcCCCCceEEEEEcCCCC-EEEEecCCCcEEEEeCcCCeee
Q psy16373         75 ----------------------------------QLLFTLHGHCGPITTLFIDGVSM-MSGSGSQDGLLCVWDTVTGACM  119 (166)
Q Consensus        75 ----------------------------------~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~v~~~d~~~~~~~  119 (166)
                                                        +.+..+.+|...|.+++|+|++. ++++++.|+.|++||+++.+..
T Consensus       207 ~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~  286 (435)
T 4e54_B          207 TINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGK  286 (435)
T ss_dssp             SCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSS
T ss_pred             CCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccccccc
Confidence                                              12234467888999999999865 7889999999999999877654


Q ss_pred             EE---eecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeee
Q psy16373        120 YS---IQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       120 ~~---~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      ..   ..+|..+|++++|+|  .+|++++.|+.|++||+++++....+
T Consensus       287 ~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~  334 (435)
T 4e54_B          287 ASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGL  334 (435)
T ss_dssp             SCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEE
T ss_pred             ceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEE
Confidence            43   356889999999998  49999999999999999998776554

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.93  E-value=6.5e-24  Score=146.56  Aligned_cols=158  Identities=18%  Similarity=0.212  Sum_probs=132.3

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccc--ceeh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ--LLFT   79 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~--~~~~   79 (166)
                      +..+..+++++ ++.+++|+........  ........+|..+|.+++|  ++++|++++.|+.|++||+.+++  ....
T Consensus        60 ~~~~~~l~~~~-dg~i~iw~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~  136 (337)
T 1gxr_A           60 SNPTRHVYTGG-KGCVKVWDISHPGNKS--PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAE  136 (337)
T ss_dssp             CSSSSEEEEEC-BSEEEEEETTSTTCCS--CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEE
T ss_pred             ecCCcEEEEcC-CCeEEEEECCCCCcee--eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeee
Confidence            34566788888 8999999986543211  1111122378899999999  78899999999999999999876  5566


Q ss_pred             hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373         80 LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        80 ~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      +..|...+.+++|+|+++.+++++.|+.+++||+++++.+..+..|...+.+++|+|  +.+++++.|+.|++||+++++
T Consensus       137 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~  216 (337)
T 1gxr_A          137 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR  216 (337)
T ss_dssp             EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred             cccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCc
Confidence            778999999999999999999999999999999999999999999999999999998  489999999999999999998


Q ss_pred             ceeeeee
Q psy16373        158 LLSTIQL  164 (166)
Q Consensus       158 ~~~~~~~  164 (166)
                      .+..+..
T Consensus       217 ~~~~~~~  223 (337)
T 1gxr_A          217 QLQQHDF  223 (337)
T ss_dssp             EEEEEEC
T ss_pred             eEeeecC
Confidence            8776653

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.93  E-value=1.3e-24  Score=154.21  Aligned_cols=153  Identities=12%  Similarity=0.152  Sum_probs=130.7

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cC-cEEEEEecCCeEEEEEcccccceehh--
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VS-NRVITGSQDHTLKVYKLEDQQLLFTL--   80 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~-~~l~~~~~d~~v~v~~~~~~~~~~~~--   80 (166)
                      .+..+++|+.|+.+++|+................+.+|...|.+++|  ++ ++|++++.|+.|++||+++++.+..+  
T Consensus        93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  172 (402)
T 2aq5_A           93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP  172 (402)
T ss_dssp             CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT
T ss_pred             CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec
Confidence            56789999999999999987653222222345567899999999999  44 69999999999999999999998888  


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe-eccccc-EEEEEEcCC--eEEEe---ecCCcEEEEEC
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI-QAHDGC-IHALTYSDS--YVISL---GQDERLCVWDR  153 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~-v~~i~~~~~--~l~~~---~~d~~i~~wd~  153 (166)
                      ..|...|.+++|+|++..+++++.|+.+++||+++++.+..+ ..|.+. +..+.|+|+  +++++   +.|+.|++||+
T Consensus       173 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~  252 (402)
T 2aq5_A          173 DVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDT  252 (402)
T ss_dssp             TTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEET
T ss_pred             CCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcC
Confidence            789999999999999999999999999999999999999888 678765 889999983  66666   68999999999


Q ss_pred             Ccccc
Q psy16373        154 FQGHL  158 (166)
Q Consensus       154 ~~~~~  158 (166)
                      ++++.
T Consensus       253 ~~~~~  257 (402)
T 2aq5_A          253 KHLEE  257 (402)
T ss_dssp             TBCSS
T ss_pred             ccccC
Confidence            98765

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.93  E-value=1.1e-23  Score=146.92  Aligned_cols=143  Identities=15%  Similarity=0.285  Sum_probs=120.8

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccce--ehh
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL--FTL   80 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~--~~~   80 (166)
                      ..+..+++|+.|+.+++|+.....       ....+.+|..+|.+++|  ++++|++++.|+.|++||+......  ...
T Consensus        86 ~~~~~l~s~s~D~~v~lwd~~~~~-------~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~  158 (343)
T 2xzm_R           86 QENCFAISSSWDKTLRLWDLRTGT-------TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEK  158 (343)
T ss_dssp             SSTTEEEEEETTSEEEEEETTSSC-------EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTT
T ss_pred             CCCCEEEEEcCCCcEEEEECCCCc-------EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecc
Confidence            345678999999999999986543       34467799999999999  7889999999999999999744322  223


Q ss_pred             cCCCCceEEEEEcCCC----------CEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcE
Q psy16373         81 HGHCGPITTLFIDGVS----------MMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERL  148 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~----------~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i  148 (166)
                      ..|...|.+++|+|++          .++++++.|+.|++|| .+.+....+.+|...|.+++|+|  .+|++++.|+.|
T Consensus       159 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v  237 (343)
T 2xzm_R          159 ENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKL  237 (343)
T ss_dssp             TSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred             cCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeE
Confidence            3688999999999986          7899999999999999 45677788899999999999998  489999999999


Q ss_pred             EEEECCc
Q psy16373        149 CVWDRFQ  155 (166)
Q Consensus       149 ~~wd~~~  155 (166)
                      ++||+++
T Consensus       238 ~iwd~~~  244 (343)
T 2xzm_R          238 LIWDILN  244 (343)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999954

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.93  E-value=1.8e-24  Score=159.41  Aligned_cols=139  Identities=17%  Similarity=0.325  Sum_probs=124.0

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      ++....+++++.|+.+++|+...        .....+.+|..+|.+++|  ++.+|++++.|+.|++||. +++.+..+.
T Consensus       435 s~d~~~l~~~~~d~~v~~w~~~~--------~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~  505 (577)
T 2ymu_A          435 SPDDQTIASASDDKTVKLWNRNG--------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT  505 (577)
T ss_dssp             CTTSSEEEEEETTSEEEEEETTS--------CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEE
T ss_pred             CCCCCEEEEEcCCCEEEEEECCC--------CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEe
Confidence            34456889999999999998532        234467789999999999  8899999999999999995 578888899


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEE
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWD  152 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd  152 (166)
                      +|...|++++|+|+++++++++.|+.|++||. +++.+..+.+|.+.|++++|+|  .+|++++.|+.|++||
T Consensus       506 ~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd  577 (577)
T 2ymu_A          506 GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN  577 (577)
T ss_dssp             CCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             CCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence            99999999999999999999999999999995 6888999999999999999998  4899999999999997

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.93  E-value=2.3e-24  Score=162.53  Aligned_cols=153  Identities=18%  Similarity=0.224  Sum_probs=131.5

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccccee---
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF---   78 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~---   78 (166)
                      +..+.++++|+.|+.+++|+.....       ....+.+|...|.+++|  ++++|++++.|+.|++||........   
T Consensus       439 s~~g~~l~sgs~Dg~v~vwd~~~~~-------~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~  511 (694)
T 3dm0_A          439 SSDGQFALSGSWDGELRLWDLAAGV-------STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISE  511 (694)
T ss_dssp             CTTSSEEEEEETTSEEEEEETTTTE-------EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS
T ss_pred             CCCCCEEEEEeCCCcEEEEECCCCc-------ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeecc
Confidence            3456789999999999999986432       33467799999999999  78899999999999999986543322   


Q ss_pred             hhcCCCCceEEEEEcCCC--CEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECC
Q psy16373         79 TLHGHCGPITTLFIDGVS--MMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRF  154 (166)
Q Consensus        79 ~~~~~~~~v~~~~~~~~~--~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~  154 (166)
                      ...+|...|.+++|+|++  ..+++++.|+.|++||+++++....+.+|...|++++|+|  .++++++.|+.|++||++
T Consensus       512 ~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~  591 (694)
T 3dm0_A          512 GGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA  591 (694)
T ss_dssp             STTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT
T ss_pred             CCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence            234688999999999985  6899999999999999999999999999999999999998  489999999999999999


Q ss_pred             cccceeeee
Q psy16373        155 QGHLLSTIQ  163 (166)
Q Consensus       155 ~~~~~~~~~  163 (166)
                      +++.+..+.
T Consensus       592 ~~~~~~~~~  600 (694)
T 3dm0_A          592 EGKKLYSLE  600 (694)
T ss_dssp             TTEEEECCB
T ss_pred             CCceEEEec
Confidence            998876654

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.93  E-value=4.1e-24  Score=153.23  Aligned_cols=150  Identities=21%  Similarity=0.370  Sum_probs=132.1

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG   85 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~   85 (166)
                      .+..+++|+.++.+++|+....+       ....+.+|..+|.+++++++.|++|+.||.|++||+.+++.+..+.+|..
T Consensus       142 d~~~l~~g~~dg~i~iwd~~~~~-------~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~  214 (435)
T 1p22_A          142 DDQKIVSGLRDNTIKIWDKNTLE-------CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCE  214 (435)
T ss_dssp             CSSEEEEEESSSCEEEEESSSCC-------EEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCS
T ss_pred             CCCEEEEEeCCCeEEEEeCCCCe-------EEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCC
Confidence            45688999999999999975432       34467799999999999999999999999999999999999999999999


Q ss_pred             ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeee---EEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeee
Q psy16373         86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACM---YSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~---~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      .|.++++++  ..+++++.||.|++||++++...   ..+.+|...|.++.|+++.+++++.|+.|++||+++++.+.++
T Consensus       215 ~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~  292 (435)
T 1p22_A          215 AVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL  292 (435)
T ss_dssp             CEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             cEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEE
Confidence            999999974  58999999999999999887655   5677889999999998899999999999999999999888777


Q ss_pred             ee
Q psy16373        163 QL  164 (166)
Q Consensus       163 ~~  164 (166)
                      ..
T Consensus       293 ~~  294 (435)
T 1p22_A          293 NG  294 (435)
T ss_dssp             EC
T ss_pred             cC
Confidence            64

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.93  E-value=1.1e-24  Score=155.02  Aligned_cols=153  Identities=18%  Similarity=0.149  Sum_probs=129.6

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      +..+..+++++.++.+++|+......       ...+..| ..+....+  ++++|++++.|+.|++||+.+++....+.
T Consensus        65 s~~g~~l~~~~~d~~v~i~d~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  136 (420)
T 3vl1_A           65 EKVGSHLYKARLDGHDFLFNTIIRDG-------SKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ  136 (420)
T ss_dssp             EEEETTEEEEEETTEEEEEECCSEET-------TTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred             eecCCeEEEEEcCCcEEEEEecccce-------eeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence            34456789999999999999754431       1122333 22333344  88899999999999999999999888888


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      +|...|.+++|+|++.++++++.|+.|++||+++++.+..+.+|...|.+++|+|  ..+++++.|+.|++||+++++.+
T Consensus       137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~  216 (420)
T 3vl1_A          137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTI  216 (420)
T ss_dssp             SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred             cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCcee
Confidence            9999999999999999999999999999999999999999999999999999998  48999999999999999999988


Q ss_pred             eeeee
Q psy16373        160 STIQL  164 (166)
Q Consensus       160 ~~~~~  164 (166)
                      ..+..
T Consensus       217 ~~~~~  221 (420)
T 3vl1_A          217 HTFNR  221 (420)
T ss_dssp             EEECB
T ss_pred             EEeec
Confidence            87753

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.93  E-value=6.4e-25  Score=160.78  Aligned_cols=157  Identities=11%  Similarity=0.061  Sum_probs=128.1

Q ss_pred             eEEEEecCCCceEEEeeccccccee----eceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEccccc-ceehh
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMT----LTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQ-LLFTL   80 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~-~~~~~   80 (166)
                      +.+|++++.|+.+++|+........    ....+...+.+|..+|.+++| .+..|++|+.||+|++||+++++ +...+
T Consensus       225 ~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~  304 (524)
T 2j04_B          225 VGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYD  304 (524)
T ss_dssp             SCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEE
T ss_pred             CceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEe
Confidence            4589999999999999986543110    011233467789999999999 66799999999999999999763 44567


Q ss_pred             cCCCCceEEE--EEcCCC-CEEEEecCCCcEEEEeCcCCeeeEEeecccc--cEEEEEEcC--CeEEEeecCCcEEEEEC
Q psy16373         81 HGHCGPITTL--FIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSIQAHDG--CIHALTYSD--SYVISLGQDERLCVWDR  153 (166)
Q Consensus        81 ~~~~~~v~~~--~~~~~~-~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~--~v~~i~~~~--~~l~~~~~d~~i~~wd~  153 (166)
                      .+|...|.++  +++|++ .++++++.|+++++||+++++++..+.+|..  .|.+++|+|  ..+++++.|+.|++||+
T Consensus       305 ~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~  384 (524)
T 2j04_B          305 QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPS  384 (524)
T ss_dssp             ECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEET
T ss_pred             ecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEEC
Confidence            8899999999  567877 8999999999999999999887777776653  578999999  37899999999999999


Q ss_pred             Ccccceeeee
Q psy16373        154 FQGHLLSTIQ  163 (166)
Q Consensus       154 ~~~~~~~~~~  163 (166)
                      +++.++.++.
T Consensus       385 ~~~~~~~~l~  394 (524)
T 2j04_B          385 RAAFAVHPLV  394 (524)
T ss_dssp             TCTTCCEEEE
T ss_pred             cccccceeee
Confidence            9988766654

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.93  E-value=2.2e-24  Score=166.61  Aligned_cols=158  Identities=12%  Similarity=0.180  Sum_probs=127.6

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeee-----eccCCceEEEEe--cCcEEEEEecCCeEEEEEccccc-
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVEST-----RAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ-   75 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~-   75 (166)
                      +..+..+++|+.|+.+++|+............. ..+     .+|...|.+++|  ++.+|++|+.|++|++||+.+++ 
T Consensus       444 spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~-~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~  522 (902)
T 2oaj_A          444 AEYGTAFITGHSNGSVRIYDASHGDIQDNASFE-VNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQF  522 (902)
T ss_dssp             CSEEEEEEEEETTSEEEEEESSCCTTTTTBCEE-EEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC
T ss_pred             cccCcEEEEecCCCcEEEEECCCccccCCceEE-eechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccc
Confidence            456889999999999999998654311100000 011     278899999999  89999999999999999998662 


Q ss_pred             --------------------------------------------ceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEE
Q psy16373         76 --------------------------------------------LLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVW  111 (166)
Q Consensus        76 --------------------------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~  111 (166)
                                                                  ++..+.+|.+.|++++|+|+| ++++|+.|++|++|
T Consensus       523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lw  601 (902)
T 2oaj_A          523 YSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLI  601 (902)
T ss_dssp             ---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEE
T ss_pred             cCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEE
Confidence                                                        255677899999999999999 99999999999999


Q ss_pred             eCcCCeeeE-----Eee-cccccEEEEEEc-----CC-----eEEEeecCCcEEEEEC---Ccccceeeee
Q psy16373        112 DTVTGACMY-----SIQ-AHDGCIHALTYS-----DS-----YVISLGQDERLCVWDR---FQGHLLSTIQ  163 (166)
Q Consensus       112 d~~~~~~~~-----~~~-~~~~~v~~i~~~-----~~-----~l~~~~~d~~i~~wd~---~~~~~~~~~~  163 (166)
                      |+++...+.     .+. +|.+.|++++|+     |+     +|++++.|++|++||+   .+|+.+.++.
T Consensus       602 d~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~  672 (902)
T 2oaj_A          602 DRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLM  672 (902)
T ss_dssp             ETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEE
T ss_pred             ECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEec
Confidence            998877654     233 788899999999     64     8999999999999999   7777665543

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.93  E-value=6.4e-24  Score=152.22  Aligned_cols=150  Identities=22%  Similarity=0.307  Sum_probs=134.3

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccce---ehhcC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLL---FTLHG   82 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~---~~~~~   82 (166)
                      .+..+++|+.|+.+++|+.....       ....+.+|...|.+++++++.+++|+.|+.|++||+.+++..   ..+.+
T Consensus       182 ~~~~l~sg~~dg~i~vwd~~~~~-------~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~  254 (435)
T 1p22_A          182 DERVIITGSSDSTVRVWDVNTGE-------MLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVG  254 (435)
T ss_dssp             CSSEEEEEETTSCEEEEESSSCC-------EEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECC
T ss_pred             CCCEEEEEcCCCeEEEEECCCCc-------EEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecC
Confidence            45689999999999999986543       344667899999999998889999999999999999987655   56778


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeee
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      |...|.++++  ++..+++++.||.+++||+++++.+..+.+|...|.++.|+++.+++++.|+.|++||+++++++.++
T Consensus       255 ~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~  332 (435)
T 1p22_A          255 HRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL  332 (435)
T ss_dssp             CSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred             CCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEE
Confidence            9999999999  67899999999999999999999999999999999999999999999999999999999999988877


Q ss_pred             ee
Q psy16373        163 QL  164 (166)
Q Consensus       163 ~~  164 (166)
                      ..
T Consensus       333 ~~  334 (435)
T 1p22_A          333 EG  334 (435)
T ss_dssp             CC
T ss_pred             eC
Confidence            64

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.93  E-value=4e-24  Score=151.02  Aligned_cols=145  Identities=12%  Similarity=0.160  Sum_probs=127.9

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeec---c---CCceEEEEe--cCcEEEEEecC---CeEEEEEccc
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRA---H---HQPITVLEC--VSNRVITGSQD---HTLKVYKLED   73 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~i~~~~~--~~~~l~~~~~d---~~v~v~~~~~   73 (166)
                      ..+ .+++++.++.+.+|+.....       ....+..   |   ..+|.+++|  ++.+|++++.|   +.|++||+++
T Consensus       196 ~~~-~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~  267 (397)
T 1sq9_A          196 ERG-LIATGFNNGTVQISELSTLR-------PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF  267 (397)
T ss_dssp             TTS-EEEEECTTSEEEEEETTTTE-------EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT
T ss_pred             CCc-eEEEEeCCCcEEEEECCCCc-------eeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence            345 89999999999999986432       3345556   8   899999999  78999999999   9999999999


Q ss_pred             ccceehhcC-------------CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee------cc---------
Q psy16373         74 QQLLFTLHG-------------HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ------AH---------  125 (166)
Q Consensus        74 ~~~~~~~~~-------------~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~------~~---------  125 (166)
                      ++.+..+..             |...|.+++|+|++.++++++.|+.|++||+++++.+..+.      .|         
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~  347 (397)
T 1sq9_A          268 GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDE  347 (397)
T ss_dssp             CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCT
T ss_pred             CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhcccc
Confidence            999888888             99999999999999999999999999999999999999998      77         


Q ss_pred             ------cccEEEEEEcCC------------eEEEeecCCcEEEEECCccc
Q psy16373        126 ------DGCIHALTYSDS------------YVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       126 ------~~~v~~i~~~~~------------~l~~~~~d~~i~~wd~~~~~  157 (166)
                            ..+|++++|+|+            .|++++.|+.|++||+++++
T Consensus       348 ~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~  397 (397)
T 1sq9_A          348 HGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK  397 (397)
T ss_dssp             TSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred             ccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence                  899999999985            79999999999999998764

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.93  E-value=4.1e-24  Score=153.53  Aligned_cols=149  Identities=27%  Similarity=0.385  Sum_probs=127.9

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG   85 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~   85 (166)
                      .+..+++|+.|+.+++|+.....       ....+.+|..+|.+++++++.+++|+.|+.|++||+.+++.+..+.+|..
T Consensus       128 ~g~~l~sg~~dg~i~vwd~~~~~-------~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~  200 (445)
T 2ovr_B          128 CGNRIVSGSDDNTLKVWSAVTGK-------CLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTS  200 (445)
T ss_dssp             ETTEEEEEETTSCEEEEETTTCC-------EEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred             cCCEEEEEECCCcEEEEECCCCc-------EEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCC
Confidence            45678999999999999976433       34456789999999999888999999999999999999988888888999


Q ss_pred             ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeee
Q psy16373         86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      .|.++.++  +..+++++.||.+++||+++++.+..+.+|...|.++.|+++.+++++.|+.|++||+++++.+.++.
T Consensus       201 ~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  276 (445)
T 2ovr_B          201 TVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ  276 (445)
T ss_dssp             CEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEEC
T ss_pred             cEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEec
Confidence            99999885  46788999999999999999988888888888999999977889999999999999998888777665

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.93  E-value=7.7e-24  Score=146.34  Aligned_cols=150  Identities=17%  Similarity=0.266  Sum_probs=125.4

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-c---CcEEEEEecCCeEEEEEcccc-----
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-V---SNRVITGSQDHTLKVYKLEDQ-----   74 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~---~~~l~~~~~d~~v~v~~~~~~-----   74 (166)
                      +..+..|++|+.++.+++|+.......   ......+.+|..+|.+++| .   +++|++++.|+.|++||+.++     
T Consensus        20 ~~~~~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~   96 (351)
T 3f3f_A           20 DFYGRHVATCSSDQHIKVFKLDKDTSN---WELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECS   96 (351)
T ss_dssp             CSSSSEEEEEETTSEEEEEEECSSSCC---EEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTS
T ss_pred             cCCCCEEEEeeCCCeEEEEECCCCCCc---ceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccccc
Confidence            445678999999999999998654311   2344567789999999999 2   789999999999999999876     


Q ss_pred             ----cceehhcCCCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCCee------------------------------
Q psy16373         75 ----QLLFTLHGHCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTGAC------------------------------  118 (166)
Q Consensus        75 ----~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~~------------------------------  118 (166)
                          +.+..+..|...|.+++|+|+  +.++++++.|+.+++||+++++.                              
T Consensus        97 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (351)
T 3f3f_A           97 GRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWC  176 (351)
T ss_dssp             SCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEEC
T ss_pred             ccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEec
Confidence                456777889999999999999  99999999999999999875431                              


Q ss_pred             ------------------------------eEEeecccccEEEEEEcCC------eEEEeecCCcEEEEECCcc
Q psy16373        119 ------------------------------MYSIQAHDGCIHALTYSDS------YVISLGQDERLCVWDRFQG  156 (166)
Q Consensus       119 ------------------------------~~~~~~~~~~v~~i~~~~~------~l~~~~~d~~i~~wd~~~~  156 (166)
                                                    +..+.+|...|++++|+|+      ++++++.|+.|++||++++
T Consensus       177 p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~  250 (351)
T 3f3f_A          177 PSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK  250 (351)
T ss_dssp             CCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred             cCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence                                          3445578889999999985      6999999999999999875

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.93  E-value=8.1e-24  Score=144.84  Aligned_cols=149  Identities=15%  Similarity=0.157  Sum_probs=127.0

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeec-cCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRA-HHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      .+..+++++.++.+.+|+..         .....+.. |...+.++++ ....+++++.|+.|++||+++++.+..+..|
T Consensus       154 ~~~~l~~~~~d~~i~i~d~~---------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~  224 (313)
T 3odt_A          154 SENKFLTASADKTIKLWQND---------KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGH  224 (313)
T ss_dssp             TTTEEEEEETTSCEEEEETT---------EEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred             CCCEEEEEECCCCEEEEecC---------ceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcC
Confidence            45678899999999999832         12234444 8889999999 4445999999999999999999999999999


Q ss_pred             CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-CeEEEeecCCcEEEEECCcccceeee
Q psy16373         84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-SYVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      ...|.+++|+|++ .+++++.|+.|++||+++++.+..+..|..+|.+++|+| +.+++++.|+.|++||+++++.+...
T Consensus       225 ~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~~~~  303 (313)
T 3odt_A          225 ESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSRWASED  303 (313)
T ss_dssp             SSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGGGCCC--
T ss_pred             CceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCCceeehh
Confidence            9999999999998 588999999999999999999999999999999999998 46888999999999999998877665


Q ss_pred             ee
Q psy16373        163 QL  164 (166)
Q Consensus       163 ~~  164 (166)
                      ..
T Consensus       304 ~~  305 (313)
T 3odt_A          304 EI  305 (313)
T ss_dssp             --
T ss_pred             hh
Confidence            54

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.93  E-value=4.7e-25  Score=154.98  Aligned_cols=154  Identities=14%  Similarity=0.109  Sum_probs=121.8

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccc---ceeh
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ---LLFT   79 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~---~~~~   79 (166)
                      ..+..|++++.|+.+++|+.....    .......+.+|...|.+++|  ++++|++++.|+.|++||+++++   ....
T Consensus        65 ~~~~~l~s~s~d~~v~vwd~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~  140 (377)
T 3dwl_C           65 PKSNRIVTCSQDRNAYVYEKRPDG----TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKH  140 (377)
T ss_dssp             TTTCCEEEEETTSSEEEC----------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEE
T ss_pred             CCCCEEEEEeCCCeEEEEEcCCCC----ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeE
Confidence            345689999999999999986543    11233456689999999999  78899999999999999999876   3666


Q ss_pred             hcC-CCCceEEEEEcCCCCEEEEecCCCcEEEEeCc------------------CCeeeEEeecccccEEEEEEcC--Ce
Q psy16373         80 LHG-HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV------------------TGACMYSIQAHDGCIHALTYSD--SY  138 (166)
Q Consensus        80 ~~~-~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~------------------~~~~~~~~~~~~~~v~~i~~~~--~~  138 (166)
                      +.. |...|.+++|+|++.++++++.|+.+++||++                  .++++..+ .|...|.+++|+|  .+
T Consensus       141 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~  219 (377)
T 3dwl_C          141 LKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNA  219 (377)
T ss_dssp             ECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSC
T ss_pred             eecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCE
Confidence            777 99999999999999999999999999999985                  34556666 8899999999998  48


Q ss_pred             EEEeecCCcEEEEECCcccc----eeeee
Q psy16373        139 VISLGQDERLCVWDRFQGHL----LSTIQ  163 (166)
Q Consensus       139 l~~~~~d~~i~~wd~~~~~~----~~~~~  163 (166)
                      |++++.|+.|++||+++++.    +..+.
T Consensus       220 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~  248 (377)
T 3dwl_C          220 LAYAGHDSSVTIAYPSAPEQPPRALITVK  248 (377)
T ss_dssp             EEEEETTTEEC-CEECSTTSCEEECCCEE
T ss_pred             EEEEeCCCcEEEEECCCCCCcceeeEeec
Confidence            99999999999999999887    55544

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.93  E-value=7.5e-24  Score=147.73  Aligned_cols=152  Identities=13%  Similarity=0.151  Sum_probs=124.8

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c----CcEEEEEecCCeEEEEEcccccceehh
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V----SNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~----~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      ...+++++.+ .+.+|+........  .........|...|.+++|  +    +.+|++|+.|+.|++||+.+++.+..+
T Consensus        35 ~~~~~~~~~~-~v~vw~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~  111 (366)
T 3k26_A           35 PLVFATVGSN-RVTLYECHSQGEIR--LLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHY  111 (366)
T ss_dssp             CEEEEEEETT-EEEEEEECGGGCEE--EEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEE
T ss_pred             ceEEEECCCC-EEEEEEcCCCcEEE--eeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeee
Confidence            3455555555 88888876543211  1111122246788999999  4    568999999999999999999999999


Q ss_pred             cCCCCceEEEEEcC-CCCEEEEecCCCcEEEEeCcCCeeeEEe---ecccccEEEEEEcC--CeEEEeecCCcEEEEECC
Q psy16373         81 HGHCGPITTLFIDG-VSMMSGSGSQDGLLCVWDTVTGACMYSI---QAHDGCIHALTYSD--SYVISLGQDERLCVWDRF  154 (166)
Q Consensus        81 ~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~~~~~~~---~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~  154 (166)
                      .+|...|.+++|+| ++..+++++.||.|++||+++++.+..+   ..|...|.+++|+|  +.+++++.|+.|++||++
T Consensus       112 ~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~  191 (366)
T 3k26_A          112 VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRIN  191 (366)
T ss_dssp             ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESC
T ss_pred             cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECC
Confidence            99999999999999 8999999999999999999999998888   67999999999998  589999999999999999


Q ss_pred             cccceee
Q psy16373        155 QGHLLST  161 (166)
Q Consensus       155 ~~~~~~~  161 (166)
                      +++.+..
T Consensus       192 ~~~~~~~  198 (366)
T 3k26_A          192 SKRMMNA  198 (366)
T ss_dssp             SHHHHHH
T ss_pred             CCccccc
Confidence            8776543

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.93  E-value=5.2e-25  Score=154.78  Aligned_cols=147  Identities=16%  Similarity=0.131  Sum_probs=119.2

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccc---cee
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ---LLF   78 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~---~~~   78 (166)
                      +..+..+++|+.++.+++|+.....     ......+.+|..+|.+++|  ++++|++++.|+.|++||+.+++   ...
T Consensus        20 s~~g~~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~   94 (377)
T 3dwl_C           20 NSQRTEFVTTTATNQVELYEQDGNG-----WKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTL   94 (377)
T ss_dssp             CSSSSEEECCCSSSCBCEEEEETTE-----EEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEE
T ss_pred             CCCCCEEEEecCCCEEEEEEccCCc-----eEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeee
Confidence            4456789999999999999986432     1344567789999999999  77899999999999999999877   566


Q ss_pred             hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe---eeEEeec-ccccEEEEEEcC--CeEEEeecCCcEEEEE
Q psy16373         79 TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA---CMYSIQA-HDGCIHALTYSD--SYVISLGQDERLCVWD  152 (166)
Q Consensus        79 ~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~---~~~~~~~-~~~~v~~i~~~~--~~l~~~~~d~~i~~wd  152 (166)
                      .+..|...|.+++|+|++..+++++.|+.+++||+++++   ....+.. |...|.+++|+|  .++++++.|+.|++||
T Consensus        95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd  174 (377)
T 3dwl_C           95 VLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLS  174 (377)
T ss_dssp             ECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEE
T ss_pred             EecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEE
Confidence            777899999999999999999999999999999999876   4677777 999999999998  4899999999999999


Q ss_pred             CCc
Q psy16373        153 RFQ  155 (166)
Q Consensus       153 ~~~  155 (166)
                      +++
T Consensus       175 ~~~  177 (377)
T 3dwl_C          175 AYV  177 (377)
T ss_dssp             ECC
T ss_pred             EEe
Confidence            853

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.93  E-value=4.9e-25  Score=161.40  Aligned_cols=142  Identities=11%  Similarity=0.026  Sum_probs=122.6

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEE--Ee--cC-cEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVL--EC--VS-NRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~--~~-~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      ..|++|+.|+.+++|+.....      .+...+.+|..+|.++  .+  ++ .+|++|+.|++|++||+++++....+.+
T Consensus       278 ~~lasgs~DgtV~lWD~~~~~------~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~  351 (524)
T 2j04_B          278 TTVVCGFKNGFVAEFDLTDPE------VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVS  351 (524)
T ss_dssp             SEEEEEETTSEEEEEETTBCS------SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEE
T ss_pred             CeEEEEeCCCEEEEEECCCCC------CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccc
Confidence            479999999999999986432      1233567899999999  45  45 7899999999999999999887777766


Q ss_pred             CCC--ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373         83 HCG--PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        83 ~~~--~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~  155 (166)
                      |..  .|.+++|+|++..+++++.|++|++||++++.++..+.+|.+.|++++|+|  ..|++|+.|++|++||+..
T Consensus       352 ~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~  428 (524)
T 2j04_B          352 RFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAAR  428 (524)
T ss_dssp             ECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred             ccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence            653  478999999999999999999999999999988888999999999999999  4899999999999999754

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.93  E-value=8.9e-24  Score=148.00  Aligned_cols=151  Identities=14%  Similarity=0.156  Sum_probs=128.8

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c--CcEEEEEecCCeEEEEEccccc--ce
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V--SNRVITGSQDHTLKVYKLEDQQ--LL   77 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~--~~~l~~~~~d~~v~v~~~~~~~--~~   77 (166)
                      +..+..+++|+.++.+++|+.....     ......+.+|..+|.+++|  +  +++|++++.|+.|++||+.+++  .+
T Consensus        20 s~~~~~l~~~~~dg~i~iw~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~   94 (379)
T 3jrp_A           20 DYYGKRLATCSSDKTIKIFEVEGET-----HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQI   94 (379)
T ss_dssp             CSSSSEEEEEETTSCEEEEEEETTE-----EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEE
T ss_pred             cCCCCEEEEEECCCcEEEEecCCCc-----ceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEe
Confidence            4456789999999999999986322     2344567789999999999  3  7899999999999999999886  66


Q ss_pred             ehhcCCCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCCe--eeEEeecccccEEEEEEcC---------------Ce
Q psy16373         78 FTLHGHCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTGA--CMYSIQAHDGCIHALTYSD---------------SY  138 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~v~~i~~~~---------------~~  138 (166)
                      ..+..|...|.+++|+|+  +..+++++.|+.+++||+++..  ....+..|...|.+++|+|               ..
T Consensus        95 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  174 (379)
T 3jrp_A           95 AVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK  174 (379)
T ss_dssp             EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCE
T ss_pred             eeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCE
Confidence            777889999999999999  9999999999999999998773  4445678899999999987               38


Q ss_pred             EEEeecCCcEEEEECCcccce
Q psy16373        139 VISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus       139 l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      +++++.|+.|++||++++...
T Consensus       175 l~~~~~dg~i~i~d~~~~~~~  195 (379)
T 3jrp_A          175 FVTGGADNLVKIWKYNSDAQT  195 (379)
T ss_dssp             EEEEETTSCEEEEEEETTTTE
T ss_pred             EEEEeCCCeEEEEEecCCCcc
Confidence            999999999999999877643

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.93  E-value=6e-24  Score=148.12  Aligned_cols=120  Identities=13%  Similarity=0.108  Sum_probs=103.7

Q ss_pred             ccCCceEEEEe----cCcEEEEEecCCeEEEEEcccccceehhc-CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC
Q psy16373         42 AHHQPITVLEC----VSNRVITGSQDHTLKVYKLEDQQLLFTLH-GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG  116 (166)
Q Consensus        42 ~~~~~i~~~~~----~~~~l~~~~~d~~v~v~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~  116 (166)
                      +|..+|.++++    +++++++++.|+.|++||+++++...... .+...+.+++|+|++.++++|+.||.|++||++++
T Consensus       123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~  202 (343)
T 3lrv_A          123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP  202 (343)
T ss_dssp             CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT
T ss_pred             CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence            56688999999    46789999999999999999988866553 35568999999999999999999999999999999


Q ss_pred             eee-EEeec-ccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeee
Q psy16373        117 ACM-YSIQA-HDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       117 ~~~-~~~~~-~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      +.+ ..+.. |.++|++++|+|  .+|++++ |+.|++||+++++.+..+
T Consensus       203 ~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~  251 (343)
T 3lrv_A          203 DQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAY  251 (343)
T ss_dssp             TSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSS
T ss_pred             CCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceee
Confidence            877 77887 999999999998  3788888 559999999998876543

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.93  E-value=3.7e-23  Score=143.14  Aligned_cols=156  Identities=19%  Similarity=0.202  Sum_probs=129.0

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccc--------
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQL--------   76 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~--------   76 (166)
                      +.+|++|+.|+.+++|+....+.  ....+...+.+|..+|.+++|  ++++|++++.|+.|++|+......        
T Consensus        51 ~~~l~S~s~D~~i~vWd~~~~~~--~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~  128 (340)
T 4aow_A           51 PDMILSASRDKTIIMWKLTRDET--NYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT  128 (340)
T ss_dssp             TTEEEEEETTSCEEEEEECCSSS--CSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred             CCEEEEEcCCCeEEEEECCCCCc--ccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCC
Confidence            46899999999999999865442  223345677899999999999  788999999999999998863211        


Q ss_pred             -----------------------------------eehhcCCCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCCeee
Q psy16373         77 -----------------------------------LFTLHGHCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTGACM  119 (166)
Q Consensus        77 -----------------------------------~~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~~~  119 (166)
                                                         .....+|...+..++++++  ...+++++.|+.+++||+++++.+
T Consensus       129 ~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~  208 (340)
T 4aow_A          129 KDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLK  208 (340)
T ss_dssp             SCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEE
T ss_pred             CceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCcee
Confidence                                               1123457778899999876  457889999999999999999999


Q ss_pred             EEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        120 YSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       120 ~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ..+.+|..+|++++|+|  .+|++++.|+.|++||+++++++..+..
T Consensus       209 ~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~  255 (340)
T 4aow_A          209 TNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG  255 (340)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred             eEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC
Confidence            99999999999999998  4899999999999999999988877654

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.93  E-value=1.7e-23  Score=150.35  Aligned_cols=149  Identities=26%  Similarity=0.402  Sum_probs=132.7

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCc
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP   86 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~   86 (166)
                      +..+++|+.|+.+++|+....+       ....+.+|...|.++.++++.+++|+.|+.|++||+.+++.+..+.+|...
T Consensus       169 ~~~l~s~~~dg~i~vwd~~~~~-------~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~  241 (445)
T 2ovr_B          169 DNIIISGSTDRTLKVWNAETGE-------CIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAA  241 (445)
T ss_dssp             TTEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSC
T ss_pred             CCEEEEEeCCCeEEEEECCcCc-------EEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCccc
Confidence            4578999999999999976542       344667899999999998899999999999999999999998889999999


Q ss_pred             eEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373         87 ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus        87 v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      |.++++  ++..+++++.|+.+++||+++++.+..+.+|...|.++.|++..+++++.|+.|++||+++++.+.++..
T Consensus       242 v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  317 (445)
T 2ovr_B          242 VRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG  317 (445)
T ss_dssp             EEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred             EEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcC
Confidence            999998  6788999999999999999999999999999999999999888999999999999999999988876653

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.92  E-value=3.2e-23  Score=146.11  Aligned_cols=151  Identities=13%  Similarity=0.165  Sum_probs=127.8

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      .+..+++++.|+.+++|+.....     ........+|...|.+++|  ++++|++++.|+.|++||+ +++.+..+.+|
T Consensus       130 ~~~~l~s~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h  203 (383)
T 3ei3_B          130 NTNQLFVSSIRGATTLRDFSGSV-----IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLH  203 (383)
T ss_dssp             EEEEEEEEETTTEEEEEETTSCE-----EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECS
T ss_pred             CCCEEEEEeCCCEEEEEECCCCc-----eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccC
Confidence            45789999999999999987321     1112222345688999999  7899999999999999999 57778888899


Q ss_pred             CCceEEEEEcCCCC-EEEEecCCCcEEEEeCcC----CeeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCc
Q psy16373         84 CGPITTLFIDGVSM-MSGSGSQDGLLCVWDTVT----GACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        84 ~~~v~~~~~~~~~~-~~~~~~~d~~v~~~d~~~----~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~  155 (166)
                      ...|.+++|+|++. .+++++.|+.|++||+++    +..+..+ +|...|.+++|+|   .++++++.|+.|++||+++
T Consensus       204 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~  282 (383)
T 3ei3_B          204 KAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD  282 (383)
T ss_dssp             SSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB
T ss_pred             CCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC
Confidence            99999999999988 999999999999999998    5566666 6899999999998   4899999999999999999


Q ss_pred             ccceeeee
Q psy16373        156 GHLLSTIQ  163 (166)
Q Consensus       156 ~~~~~~~~  163 (166)
                      ++.+..+.
T Consensus       283 ~~~~~~~~  290 (383)
T 3ei3_B          283 WSKPDQII  290 (383)
T ss_dssp             TTSCSEEE
T ss_pred             Cccccccc
Confidence            88876665

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.92  E-value=3.4e-24  Score=149.50  Aligned_cols=145  Identities=15%  Similarity=0.238  Sum_probs=126.3

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehh---
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTL---   80 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~---   80 (166)
                      +..+++|+.++.+++|+....+       ....+.+|..+|.+++|   ++++|++++.|+.|++||+++++.+..+   
T Consensus        85 ~~~l~~~~~dg~i~v~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  157 (366)
T 3k26_A           85 HPLLAVAGSRGIIRIINPITMQ-------CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGV  157 (366)
T ss_dssp             CEEEEEEETTCEEEEECTTTCC-------EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECST
T ss_pred             CCEEEEecCCCEEEEEEchhce-------EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccc
Confidence            5689999999999999976433       34456789999999999   5689999999999999999999888777   


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee----------------------------cccccEEEE
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ----------------------------AHDGCIHAL  132 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~----------------------------~~~~~v~~i  132 (166)
                      ..|...|.+++|+|++..+++++.|+.+++||+++++....+.                            .|...|.++
T Consensus       158 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  237 (366)
T 3k26_A          158 EGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCV  237 (366)
T ss_dssp             TSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEE
T ss_pred             ccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEE
Confidence            6899999999999999999999999999999998776544333                            388999999


Q ss_pred             EEcCCeEEEeecCCcEEEEECCcccc
Q psy16373        133 TYSDSYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus       133 ~~~~~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      +|+++++++++.|+.|++||+++++.
T Consensus       238 ~~~~~~l~~~~~d~~i~~wd~~~~~~  263 (366)
T 3k26_A          238 RWLGDLILSKSCENAIVCWKPGKMED  263 (366)
T ss_dssp             EEETTEEEEECSSSEEEEEEESSTTC
T ss_pred             EEcCCEEEEEecCCEEEEEeCCCccc
Confidence            99999999999999999999988754

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.92  E-value=2.4e-24  Score=152.87  Aligned_cols=156  Identities=12%  Similarity=0.161  Sum_probs=119.5

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe----------cCcEEEEEecCCeEEEEEcccc
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC----------VSNRVITGSQDHTLKVYKLEDQ   74 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----------~~~~l~~~~~d~~v~v~~~~~~   74 (166)
                      .....+++++.|+.+++|+.......  .......+.+|.+.|++++|          ++++|++++.|++|++||+.++
T Consensus        99 ~~~~~las~~~d~~v~lw~~~~~~~~--~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~  176 (393)
T 4gq1_A           99 VYSLFLACVCQDNTVRLIITKNETII--TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE  176 (393)
T ss_dssp             EEEEEEEEEETTSCEEEEEEETTEEE--EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred             CCCCEEEEEeCCCcEEEEECCCCccc--eeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence            34668999999999999998655422  22334567899999999999          3578999999999999999988


Q ss_pred             cceehhcCCCCceEEEEEcCCC-CEEEEecCCCcEEEEeCcCCeeeEEe-------------------------eccccc
Q psy16373         75 QLLFTLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSI-------------------------QAHDGC  128 (166)
Q Consensus        75 ~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~~~~~-------------------------~~~~~~  128 (166)
                      .....+..|...+.+++|+|++ .++++++.|++|++||+++++.....                         .+|...
T Consensus       177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  256 (393)
T 4gq1_A          177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS  256 (393)
T ss_dssp             EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS
T ss_pred             ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc
Confidence            8887788899999999999986 58999999999999999877543222                         346667


Q ss_pred             EEEEEEcC---CeEEEeecCCcEEEEECCcccceeee
Q psy16373        129 IHALTYSD---SYVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       129 v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      +.++.|.+   ..+++++.|+.+++||+.+++....+
T Consensus       257 v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l  293 (393)
T 4gq1_A          257 LANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEI  293 (393)
T ss_dssp             CSEEEEETTTTCEEEEECTTSEEEEEEC---------
T ss_pred             ceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceE
Confidence            88888863   48999999999999999887765544

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.92  E-value=1.3e-23  Score=154.91  Aligned_cols=150  Identities=19%  Similarity=0.347  Sum_probs=130.4

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      ++.+..+++++.++.+++|+...        .....+.+|...|.+++|  ++.+|++++.|+.|++||. +++.+..+.
T Consensus       394 s~dg~~l~~~~~d~~v~~~~~~~--------~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~  464 (577)
T 2ymu_A          394 SPDGQTIASASDDKTVKLWNRNG--------QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLT  464 (577)
T ss_dssp             CTTSSCEEEEETTSEEEEECTTC--------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEE
T ss_pred             CCCCCEEEEEeCCCEEEEEeCCC--------CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEc
Confidence            34456789999999999998532        234567789999999999  7889999999999999996 467778888


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      +|...|.+++|+|++.++++++.|+.|++||. +++.+..+.+|...|++++|+|  .+|++++.|+.|++||. +++.+
T Consensus       465 ~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~  542 (577)
T 2ymu_A          465 GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLL  542 (577)
T ss_dssp             CCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEE
T ss_pred             CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEE
Confidence            99999999999999999999999999999995 7888899999999999999998  48999999999999995 67777


Q ss_pred             eeeee
Q psy16373        160 STIQL  164 (166)
Q Consensus       160 ~~~~~  164 (166)
                      .++..
T Consensus       543 ~~~~~  547 (577)
T 2ymu_A          543 QTLTG  547 (577)
T ss_dssp             EEEEC
T ss_pred             EEEcC
Confidence            77654

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.92  E-value=1.8e-23  Score=150.73  Aligned_cols=152  Identities=19%  Similarity=0.251  Sum_probs=132.7

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      .+..+++|+.|+.+++|+.....       ....+.+|..+|.+++| .+..+++|+.|+.|++||+++++.+..+.+|.
T Consensus       131 ~~~~l~sgs~dg~i~vwd~~~~~-------~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~  203 (464)
T 3v7d_B          131 EDNYVITGADDKMIRVYDSINKK-------FLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHN  203 (464)
T ss_dssp             ETTEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred             CCCEEEEEcCCCcEEEEECCCCc-------EEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCC
Confidence            45689999999999999976443       44567799999999999 55599999999999999999999999999999


Q ss_pred             CceEEEEEc--CCCCEEEEecCCCcEEEEeCcCCee-----------------------eEEeecccccEEEEEEcCCeE
Q psy16373         85 GPITTLFID--GVSMMSGSGSQDGLLCVWDTVTGAC-----------------------MYSIQAHDGCIHALTYSDSYV  139 (166)
Q Consensus        85 ~~v~~~~~~--~~~~~~~~~~~d~~v~~~d~~~~~~-----------------------~~~~~~~~~~v~~i~~~~~~l  139 (166)
                      ..|.+++++  +++..+++++.|+.+++||++++..                       +..+.+|...+.++..+++.+
T Consensus       204 ~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l  283 (464)
T 3v7d_B          204 STVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIV  283 (464)
T ss_dssp             SCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEE
T ss_pred             CccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEE
Confidence            999999998  5678999999999999999987652                       456778889999998888999


Q ss_pred             EEeecCCcEEEEECCcccceeeeee
Q psy16373        140 ISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       140 ~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ++++.|+.|++||+++++.+..+..
T Consensus       284 ~~~~~d~~i~vwd~~~~~~~~~~~~  308 (464)
T 3v7d_B          284 VSGSYDNTLIVWDVAQMKCLYILSG  308 (464)
T ss_dssp             EEEETTSCEEEEETTTTEEEEEECC
T ss_pred             EEEeCCCeEEEEECCCCcEEEEecC
Confidence            9999999999999999988877653

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.92  E-value=1.3e-23  Score=166.41  Aligned_cols=153  Identities=20%  Similarity=0.309  Sum_probs=137.7

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      +..+..+++|+.++.+++|+.....       ....+.+|...|.+++|  ++++|++++.|+.|++||+.+++.+..+.
T Consensus       624 s~~~~~l~s~~~d~~i~vw~~~~~~-------~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~  696 (1249)
T 3sfz_A          624 SQDGQRIASCGADKTLQVFKAETGE-------KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYD  696 (1249)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTCC-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             CCCCCEEEEEeCCCeEEEEECCCCC-------EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEc
Confidence            4456789999999999999986543       34467799999999999  78899999999999999999999999999


Q ss_pred             CCCCceEEEEEcC--CCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373         82 GHCGPITTLFIDG--VSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        82 ~~~~~v~~~~~~~--~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      +|...|.+++|+|  ++..+++++.|+.+++||+++++.+..+.+|...|++++|+|  +.+++++.|+.|++||+++++
T Consensus       697 ~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~  776 (1249)
T 3sfz_A          697 EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSAN  776 (1249)
T ss_dssp             CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTE
T ss_pred             CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCc
Confidence            9999999999999  466899999999999999999999999999999999999998  489999999999999999988


Q ss_pred             ceeeee
Q psy16373        158 LLSTIQ  163 (166)
Q Consensus       158 ~~~~~~  163 (166)
                      ....+.
T Consensus       777 ~~~~~~  782 (1249)
T 3sfz_A          777 ERKSIN  782 (1249)
T ss_dssp             EEEEEE
T ss_pred             ccceec
Confidence            776654

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.92  E-value=3e-23  Score=148.49  Aligned_cols=159  Identities=13%  Similarity=0.205  Sum_probs=129.6

Q ss_pred             cceEEEEecCCCceEEEeecccc---ccee-eceeeeeeee--c--cCCceEEEEe----cCcEEEEEecCCeEEEEEcc
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVE---EEMT-LTCCKVESTR--A--HHQPITVLEC----VSNRVITGSQDHTLKVYKLE   72 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~--~--~~~~i~~~~~----~~~~l~~~~~d~~v~v~~~~   72 (166)
                      ..+..+++|+.|+.+++|+....   .... .....+..+.  .  +...+.++.+    ++.+|++++.|+.|++||++
T Consensus       121 ~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~  200 (437)
T 3gre_A          121 PNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR  200 (437)
T ss_dssp             TTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT
T ss_pred             CCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence            34568999999999999988522   1111 0111122222  2  5667888875    58899999999999999999


Q ss_pred             cccceehhcC--CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee-cccccEEEEEEcCC------eEEEee
Q psy16373         73 DQQLLFTLHG--HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ-AHDGCIHALTYSDS------YVISLG  143 (166)
Q Consensus        73 ~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~-~~~~~v~~i~~~~~------~l~~~~  143 (166)
                      +++.+..+..  |...|.+++|+|++.++++++.||.|++||+++++++..+. .|..+|.+++|+|.      ++++++
T Consensus       201 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~  280 (437)
T 3gre_A          201 TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGS  280 (437)
T ss_dssp             TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEES
T ss_pred             CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEc
Confidence            9999988887  88999999999999999999999999999999999999886 78889999977752      899999


Q ss_pred             cCCcEEEEECCcccceeeee
Q psy16373        144 QDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       144 ~d~~i~~wd~~~~~~~~~~~  163 (166)
                      .|+.|++||+++++.+..+.
T Consensus       281 ~dg~i~iwd~~~~~~~~~~~  300 (437)
T 3gre_A          281 SKTFLTIWNFVKGHCQYAFI  300 (437)
T ss_dssp             TTEEEEEEETTTTEEEEEEE
T ss_pred             CCCcEEEEEcCCCcEEEEEE
Confidence            99999999999999887765

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.92  E-value=2.7e-23  Score=145.41  Aligned_cols=155  Identities=13%  Similarity=0.113  Sum_probs=130.4

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccc----ee
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQL----LF   78 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~----~~   78 (166)
                      ..+..+++++.++.+++|+.....     ......+..|...|.+++|  ++++|++++.|+.|++||+...+.    ..
T Consensus        62 ~~~~~l~~~~~dg~i~vwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~  136 (372)
T 1k8k_C           62 PDSNRIVTCGTDRNAYVWTLKGRT-----WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKH  136 (372)
T ss_dssp             TTTTEEEEEETTSCEEEEEEETTE-----EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEE
T ss_pred             CCCCEEEEEcCCCeEEEEECCCCe-----eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeee
Confidence            345678999999999999975433     1223344578899999999  788999999999999999988763    22


Q ss_pred             hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeC------------------cCCeeeEEeecccccEEEEEEcC--Ce
Q psy16373         79 TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT------------------VTGACMYSIQAHDGCIHALTYSD--SY  138 (166)
Q Consensus        79 ~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~------------------~~~~~~~~~~~~~~~v~~i~~~~--~~  138 (166)
                      ....|...|.+++|+|++.++++++.|+.+++||+                  ..++.+..+..|...|.+++|+|  ++
T Consensus       137 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  216 (372)
T 1k8k_C          137 IKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSR  216 (372)
T ss_dssp             ECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSE
T ss_pred             eecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCE
Confidence            33568899999999999999999999999999995                  36788888889999999999998  49


Q ss_pred             EEEeecCCcEEEEECCcccceeeeee
Q psy16373        139 VISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       139 l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      +++++.|+.|++||+++++.+..+..
T Consensus       217 l~~~~~d~~i~i~d~~~~~~~~~~~~  242 (372)
T 1k8k_C          217 VAWVSHDSTVCLADADKKMAVATLAS  242 (372)
T ss_dssp             EEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred             EEEEeCCCEEEEEECCCCceeEEEcc
Confidence            99999999999999999998877764

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.92  E-value=1.1e-23  Score=148.79  Aligned_cols=156  Identities=16%  Similarity=0.222  Sum_probs=132.2

Q ss_pred             cceEE-EEecCCCceEEEeeccc------ccceeeceeeeeee-------eccCCceEEEEe--cCcEEEEEecCCeEEE
Q psy16373          5 VHRIH-LRTGSAGSLLDFKKMQV------EEEMTLTCCKVEST-------RAHHQPITVLEC--VSNRVITGSQDHTLKV   68 (166)
Q Consensus         5 ~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-------~~~~~~i~~~~~--~~~~l~~~~~d~~v~v   68 (166)
                      ..+.. +++++.++.+++|+...      .....  ..+...+       ..|...|.+++|  ++ .+++++.|+.|++
T Consensus       135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i  211 (397)
T 1sq9_A          135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN--WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQI  211 (397)
T ss_dssp             ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTC--CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEE
T ss_pred             CCCceEEEEEeCCCcEEEEeCCccccccccceee--ccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEE
Confidence            34556 89999999999999876      32211  1111133       348889999999  56 9999999999999


Q ss_pred             EEcccccceehhcC---C---CCceEEEEEcCCCCEEEEecCC---CcEEEEeCcCCeeeEEeec-------------cc
Q psy16373         69 YKLEDQQLLFTLHG---H---CGPITTLFIDGVSMMSGSGSQD---GLLCVWDTVTGACMYSIQA-------------HD  126 (166)
Q Consensus        69 ~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~~~~~~~d---~~v~~~d~~~~~~~~~~~~-------------~~  126 (166)
                      ||+++++.+..+..   |   ...|.+++|+|++.++++++.|   +.|++||+++++.+..+..             |.
T Consensus       212 ~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (397)
T 1sq9_A          212 SELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHS  291 (397)
T ss_dssp             EETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBS
T ss_pred             EECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccC
Confidence            99999999888888   8   9999999999999999999999   9999999999999999988             99


Q ss_pred             ccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373        127 GCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       127 ~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      ..|.+++|+|  .+|++++.|+.|++||+++++.+..+.
T Consensus       292 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  330 (397)
T 1sq9_A          292 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN  330 (397)
T ss_dssp             SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             CcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence            9999999998  599999999999999999999888876

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.92  E-value=3e-23  Score=148.71  Aligned_cols=147  Identities=18%  Similarity=0.244  Sum_probs=124.9

Q ss_pred             EEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc---cceehhcC
Q psy16373          9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ---QLLFTLHG   82 (166)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~---~~~~~~~~   82 (166)
                      .|++|+.++.+.+|+................+.+|...|.+++|   ++.+|++++.|+.|++||+++.   +.+..+..
T Consensus       196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~  275 (430)
T 2xyi_A          196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA  275 (430)
T ss_dssp             EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred             eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence            89999999999999987633211112234456689999999999   4678999999999999999987   56667778


Q ss_pred             CCCceEEEEEcCCCC-EEEEecCCCcEEEEeCcC-CeeeEEeecccccEEEEEEcCC---eEEEeecCCcEEEEECCc
Q psy16373         83 HCGPITTLFIDGVSM-MSGSGSQDGLLCVWDTVT-GACMYSIQAHDGCIHALTYSDS---YVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~-~~~~~~~d~~v~~~d~~~-~~~~~~~~~~~~~v~~i~~~~~---~l~~~~~d~~i~~wd~~~  155 (166)
                      |...|++++|+|++. .+++++.||.|++||+++ ..++..+..|...|++++|+|+   .+++++.|+.|++||++.
T Consensus       276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~  353 (430)
T 2xyi_A          276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK  353 (430)
T ss_dssp             CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred             CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence            999999999999876 688999999999999997 5778889999999999999983   699999999999999987

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.92  E-value=3e-23  Score=158.21  Aligned_cols=153  Identities=17%  Similarity=0.219  Sum_probs=136.2

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      ++.+..+++|+.++.+.+|+.....       ....+.+|..+|.+++|  ++++|++++.|+.|++||+.+++.+..+.
T Consensus        22 sp~~~~la~~~~~g~v~iwd~~~~~-------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~   94 (814)
T 3mkq_A           22 HPTEPWVLTTLYSGRVEIWNYETQV-------EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE   94 (814)
T ss_dssp             CSSSSEEEEEETTSEEEEEETTTTE-------EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             CCCCCEEEEEeCCCEEEEEECCCCc-------eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence            4567789999999999999975432       34466789999999999  88899999999999999999999999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC-eeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCccc
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      +|...|.+++|+|++..+++++.||.+++||++++ .....+.+|...|.+++|+|   +.+++++.|+.|++||+++++
T Consensus        95 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~  174 (814)
T 3mkq_A           95 AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST  174 (814)
T ss_dssp             CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSS
T ss_pred             cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence            99999999999999999999999999999999987 67778888999999999998   389999999999999998887


Q ss_pred             ceeeee
Q psy16373        158 LLSTIQ  163 (166)
Q Consensus       158 ~~~~~~  163 (166)
                      ....+.
T Consensus       175 ~~~~~~  180 (814)
T 3mkq_A          175 PNFTLT  180 (814)
T ss_dssp             CSEEEE
T ss_pred             ceeEEe
Confidence            766654

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.92  E-value=5e-23  Score=142.47  Aligned_cols=151  Identities=18%  Similarity=0.325  Sum_probs=129.3

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe----cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC----VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      ....+++|+.|+.+++|+.....      .......+|...+.++++    ...++++++.|+.|++||+++++.+..+.
T Consensus       139 ~~~~l~s~s~d~~~~~~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~  212 (340)
T 4aow_A          139 DNRQIVSGSRDKTIKLWNTLGVC------KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI  212 (340)
T ss_dssp             TSSCEEEEETTSCEEEECTTSCE------EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred             cCccceeecCCCeEEEEEeCCCc------eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec
Confidence            45578899999999999875433      223345688999999998    34578899999999999999999999999


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-CeEEEeecCCcEEEEECCccccee
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-SYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      +|...|.+++|+|+++++++++.|+.+++||+++.+++..+.. ...+.++.|+| ..+++++.|+.|++||++++..+.
T Consensus       213 ~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~  291 (340)
T 4aow_A          213 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVD  291 (340)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-SSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEE
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC-CceEEeeecCCCCceeeccCCCEEEEEECCCCeEEE
Confidence            9999999999999999999999999999999999999988875 56899999998 588888999999999999887766


Q ss_pred             eee
Q psy16373        161 TIQ  163 (166)
Q Consensus       161 ~~~  163 (166)
                      .+.
T Consensus       292 ~~~  294 (340)
T 4aow_A          292 ELK  294 (340)
T ss_dssp             EEC
T ss_pred             ecc
Confidence            543

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.92  E-value=1e-23  Score=150.93  Aligned_cols=152  Identities=14%  Similarity=0.232  Sum_probs=128.8

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeec--cCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRA--HHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      .+..+++|+.++.+++|+.....       ....+.+  |...|.+++|  ++.+|++|+.|+.|++||+++++.+..+.
T Consensus       181 ~~~~l~~~~~d~~i~iwd~~~~~-------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  253 (437)
T 3gre_A          181 EKSLLVALTNLSRVIIFDIRTLE-------RLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWS  253 (437)
T ss_dssp             SCEEEEEEETTSEEEEEETTTCC-------EEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEB
T ss_pred             CCCEEEEEeCCCeEEEEeCCCCe-------eeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEe
Confidence            47789999999999999986543       2334555  8899999999  78899999999999999999998888776


Q ss_pred             -CCCCceEEEEEcC----CCCEEEEecCCCcEEEEeCcCCeeeEEeec--------------------------ccccEE
Q psy16373         82 -GHCGPITTLFIDG----VSMMSGSGSQDGLLCVWDTVTGACMYSIQA--------------------------HDGCIH  130 (166)
Q Consensus        82 -~~~~~v~~~~~~~----~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~--------------------------~~~~v~  130 (166)
                       .|...|.+++++|    ++.++++++.|+.|++||+++++.+..+.+                          |...|+
T Consensus       254 ~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~  333 (437)
T 3gre_A          254 FGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALS  333 (437)
T ss_dssp             CTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGC
T ss_pred             cCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceE
Confidence             6888999996654    577999999999999999999988877764                          455688


Q ss_pred             EEEEcC-CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        131 ALTYSD-SYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       131 ~i~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      +++|++ .+|++++.|+.|++||+++++.+..+..
T Consensus       334 ~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~  368 (437)
T 3gre_A          334 TISVSNDKILLTDEATSSIVMFSLNELSSSKAVIS  368 (437)
T ss_dssp             CEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEEC
T ss_pred             EEEECCceEEEecCCCCeEEEEECCCcccceEEec
Confidence            889987 4899999999999999999998877653

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.92  E-value=5e-23  Score=145.09  Aligned_cols=148  Identities=11%  Similarity=0.161  Sum_probs=122.9

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcC--
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHG--   82 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~--   82 (166)
                      ..+++|+.++.+++|+......     .......+|...|.+++|   ++++|++++.|+.|++||+++ +.+..+..  
T Consensus        87 ~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~  160 (383)
T 3ei3_B           87 TTVAVGSKGGDIILWDYDVQNK-----TSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTD  160 (383)
T ss_dssp             TEEEEEEBTSCEEEEETTSTTC-----EEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCC
T ss_pred             CEEEEEcCCCeEEEEeCCCccc-----ceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccC
Confidence            6899999999999999875432     122233479999999999   347899999999999999986 44444443  


Q ss_pred             -CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC---eEEEeecCCcEEEEECCc---
Q psy16373         83 -HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS---YVISLGQDERLCVWDRFQ---  155 (166)
Q Consensus        83 -~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~---~l~~~~~d~~i~~wd~~~---  155 (166)
                       |...|.+++|+|++..+++++.|+.|++||+ +++++..+..|...|.+++|+|+   .+++++.|+.|++||+++   
T Consensus       161 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~  239 (383)
T 3ei3_B          161 SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKD  239 (383)
T ss_dssp             CSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCS
T ss_pred             CCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCc
Confidence             4478999999999999999999999999999 57788889999999999999983   899999999999999998   


Q ss_pred             -ccceeee
Q psy16373        156 -GHLLSTI  162 (166)
Q Consensus       156 -~~~~~~~  162 (166)
                       +..+..+
T Consensus       240 ~~~~~~~~  247 (383)
T 3ei3_B          240 KNSYIAEM  247 (383)
T ss_dssp             TTCEEEEE
T ss_pred             ccceEEEe
Confidence             4455444

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.91  E-value=4.3e-24  Score=147.48  Aligned_cols=144  Identities=15%  Similarity=0.148  Sum_probs=121.1

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c--CcEEEEEecCCeEEEEEccccc---ceeh
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V--SNRVITGSQDHTLKVYKLEDQQ---LLFT   79 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~--~~~l~~~~~d~~v~v~~~~~~~---~~~~   79 (166)
                      +..|++|+.|+.+++|+.....     ......+.+|...|.+++|  +  +.+|++|+.|+.|++||++...   ....
T Consensus        71 ~~~l~s~s~D~~v~iWd~~~~~-----~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~  145 (316)
T 3bg1_A           71 GNILASCSYDRKVIIWREENGT-----WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKI  145 (316)
T ss_dssp             SSCEEEEETTSCEEEECCSSSC-----CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCB
T ss_pred             CCEEEEEECCCEEEEEECCCCc-----ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeee
Confidence            5689999999999999976432     1233456789999999999  3  6789999999999999998753   2455


Q ss_pred             hcCCCCceEEEEEcCC-----------------CCEEEEecCCCcEEEEeCcCC---eeeEEeecccccEEEEEEcCC--
Q psy16373         80 LHGHCGPITTLFIDGV-----------------SMMSGSGSQDGLLCVWDTVTG---ACMYSIQAHDGCIHALTYSDS--  137 (166)
Q Consensus        80 ~~~~~~~v~~~~~~~~-----------------~~~~~~~~~d~~v~~~d~~~~---~~~~~~~~~~~~v~~i~~~~~--  137 (166)
                      +.+|...|.+++|+|+                 +.++++++.|+.|++||++..   +++..+.+|...|.+++|+|+  
T Consensus       146 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~  225 (316)
T 3bg1_A          146 NNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG  225 (316)
T ss_dssp             TTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSS
T ss_pred             eccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCC
Confidence            6789999999999987                 368999999999999999755   466778899999999999983  


Q ss_pred             ----eEEEeecCCcEEEEECCc
Q psy16373        138 ----YVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       138 ----~l~~~~~d~~i~~wd~~~  155 (166)
                          .|++++.|+.|++||+.+
T Consensus       226 ~~~~~las~s~D~~v~iw~~~~  247 (316)
T 3bg1_A          226 LPTSTIASCSQDGRVFIWTCDD  247 (316)
T ss_dssp             CSCCEEEEEETTCEEEEEECSS
T ss_pred             CCCceEEEEcCCCeEEEEEccC
Confidence                699999999999999876

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.91  E-value=9.4e-23  Score=139.54  Aligned_cols=148  Identities=22%  Similarity=0.310  Sum_probs=128.1

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      .+..+++++.++.+.+|+.         ......+..|..++.++.+   +++.+++++.|+.|++||.  .+....+..
T Consensus       113 ~~~~l~~~~~d~~i~~~d~---------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~  181 (313)
T 3odt_A          113 QDGVVISGSWDKTAKVWKE---------GSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSG  181 (313)
T ss_dssp             ETTEEEEEETTSEEEEEET---------TEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECS
T ss_pred             cCCEEEEEeCCCCEEEEcC---------CcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEec
Confidence            3457899999999999982         1234456789999999998   6889999999999999994  445555665


Q ss_pred             -CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC-eEEEeecCCcEEEEECCccccee
Q psy16373         83 -HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS-YVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus        83 -~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~-~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                       |...+.+++++|++. +++++.|+.+++||+++++++..+..|...|++++|+|+ .+++++.|+.|++||+++++.+.
T Consensus       182 ~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~  260 (313)
T 3odt_A          182 IHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQ  260 (313)
T ss_dssp             SCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEE
T ss_pred             cCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeE
Confidence             889999999999988 889999999999999999999999999999999999994 89999999999999999999888


Q ss_pred             eeeec
Q psy16373        161 TIQLQ  165 (166)
Q Consensus       161 ~~~~~  165 (166)
                      .+..+
T Consensus       261 ~~~~~  265 (313)
T 3odt_A          261 VITLP  265 (313)
T ss_dssp             EEECS
T ss_pred             EEecc
Confidence            77643

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.91  E-value=1.2e-22  Score=141.63  Aligned_cols=105  Identities=23%  Similarity=0.252  Sum_probs=90.0

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      +..+++|+.++.+++|+......     .....+.+|..+|.+++|  ++++|++++.|+.|++||+.+++... +..|.
T Consensus        54 g~~l~~~~~dg~i~iw~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~  127 (368)
T 3mmy_A           54 GNFLIAGSWANDVRCWEVQDSGQ-----TIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHD  127 (368)
T ss_dssp             SEEEEEEETTSEEEEEEECTTSC-----EEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECS
T ss_pred             ceEEEEECCCCcEEEEEcCCCCc-----eeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-ecccc
Confidence            47899999999999999865221     222456789999999999  78899999999999999999887765 55699


Q ss_pred             CceEEEEE--cCCCCEEEEecCCCcEEEEeCcCCe
Q psy16373         85 GPITTLFI--DGVSMMSGSGSQDGLLCVWDTVTGA  117 (166)
Q Consensus        85 ~~v~~~~~--~~~~~~~~~~~~d~~v~~~d~~~~~  117 (166)
                      ..|.+++|  +|++.++++++.|+.+++||+++++
T Consensus       128 ~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  162 (368)
T 3mmy_A          128 APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN  162 (368)
T ss_dssp             SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred             CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence            99999999  8899999999999999999987664

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.91  E-value=3.4e-23  Score=148.30  Aligned_cols=154  Identities=14%  Similarity=0.157  Sum_probs=122.7

Q ss_pred             ccceEEEEecCCCceEEEeecccccc----eeeceeeeeeeeccC------------CceEEEEe--cC--cEEEEEecC
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEE----MTLTCCKVESTRAHH------------QPITVLEC--VS--NRVITGSQD   63 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~------------~~i~~~~~--~~--~~l~~~~~d   63 (166)
                      +..+.+|++|+.|+.+++|+......    ..........+.+|.            .+|.+++|  ++  ..|++++.|
T Consensus        37 s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d  116 (447)
T 3dw8_B           37 NHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTND  116 (447)
T ss_dssp             CSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECS
T ss_pred             CCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCC
Confidence            44567899999999999999865431    111223455677898            88999999  44  689999999


Q ss_pred             CeEEEEEcccccce---------------------------------------eh-hcCCCCceEEEEEcCCCCEEEEec
Q psy16373         64 HTLKVYKLEDQQLL---------------------------------------FT-LHGHCGPITTLFIDGVSMMSGSGS  103 (166)
Q Consensus        64 ~~v~v~~~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~~~~~~~~~~~~  103 (166)
                      +.|++||+.+++..                                       .. ..+|...|.+++|+|++.+++++ 
T Consensus       117 ~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-  195 (447)
T 3dw8_B          117 KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-  195 (447)
T ss_dssp             SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-
T ss_pred             CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-
Confidence            99999999875431                                       11 35799999999999999999998 


Q ss_pred             CCCcEEEEeCcCC-eeeE-------EeecccccEEEEEEcC---CeEEEeecCCcEEEEECCcccc
Q psy16373        104 QDGLLCVWDTVTG-ACMY-------SIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus       104 ~d~~v~~~d~~~~-~~~~-------~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      .|+.|++||+++. +.+.       .+.+|...|.+++|+|   ..+++++.|+.|++||+++++.
T Consensus       196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~  261 (447)
T 3dw8_B          196 DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL  261 (447)
T ss_dssp             CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred             CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence            7999999999844 4444       2557889999999998   4799999999999999999886

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.91  E-value=5e-23  Score=148.22  Aligned_cols=152  Identities=12%  Similarity=0.150  Sum_probs=129.0

Q ss_pred             ceEE-EEecCCCceEEEeecc--cccceeeceeeeeeee--ccCCceEEEEe--cCcEEEEEecCCeEEEEEccccccee
Q psy16373          6 HRIH-LRTGSAGSLLDFKKMQ--VEEEMTLTCCKVESTR--AHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF   78 (166)
Q Consensus         6 ~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~   78 (166)
                      .+.. +++|+.++.+++|+..  ...       ....+.  .|...|.+++|  ++.+|++++.++.+++|++.+++...
T Consensus       113 d~~~l~~~~~~dg~v~iwd~~~~~~~-------~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~  185 (450)
T 2vdu_B          113 DESRLIACADSDKSLLVFDVDKTSKN-------VLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEK  185 (450)
T ss_dssp             TSSEEEEEEGGGTEEEEEEECSSSSS-------CEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSS
T ss_pred             CCCEEEEEECCCCeEEEEECcCCCCc-------eeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccc
Confidence            3444 5899999999999986  322       122232  56788999999  78899999999999999998876554


Q ss_pred             ----hhcCCCCceEEEEEcCC---CCEEEEecCCCcEEEEeCcCCeeeEE-eecccccEEEEEEc-CCeEEEeecCCcEE
Q psy16373         79 ----TLHGHCGPITTLFIDGV---SMMSGSGSQDGLLCVWDTVTGACMYS-IQAHDGCIHALTYS-DSYVISLGQDERLC  149 (166)
Q Consensus        79 ----~~~~~~~~v~~~~~~~~---~~~~~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~v~~i~~~-~~~l~~~~~d~~i~  149 (166)
                          .+.+|...|.+++|+|+   +.++++++.|+.|++||+++++.+.. +.+|...|.+++|+ ..+|++++.|+.|+
T Consensus       186 ~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~  265 (450)
T 2vdu_B          186 FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIF  265 (450)
T ss_dssp             CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEECSTTEEEEEESSSEEE
T ss_pred             ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEECCCCEEEEEeCCCeEE
Confidence                77889999999999999   99999999999999999999988877 56899999999997 35999999999999


Q ss_pred             EEECCcccceeeeee
Q psy16373        150 VWDRFQGHLLSTIQL  164 (166)
Q Consensus       150 ~wd~~~~~~~~~~~~  164 (166)
                      +||+++++.+..+..
T Consensus       266 vwd~~~~~~~~~~~~  280 (450)
T 2vdu_B          266 AWDWKTGKNLSTFDY  280 (450)
T ss_dssp             EEETTTCCEEEEEEC
T ss_pred             EEECCCCcEeeeecc
Confidence            999999998887763

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.91  E-value=2.5e-22  Score=138.58  Aligned_cols=149  Identities=15%  Similarity=0.154  Sum_probs=129.7

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      ..+..+++++.++.+.+|+.....     ......+..|...|.+++|  +++++++++.|+.|++||+++++.+..+..
T Consensus       107 ~~~~~l~~~~~d~~i~~~d~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~  181 (337)
T 1gxr_A          107 PDGCTLIVGGEASTLSIWDLAAPT-----PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG  181 (337)
T ss_dssp             TTSSEEEEEESSSEEEEEECCCC-------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred             CCCCEEEEEcCCCcEEEEECCCCC-----cceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec
Confidence            345678899999999999986543     1234456788999999999  788999999999999999999999999999


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      |...+.+++|+|++..+++++.|+.+++||+++++.+..+. +...+.+++|+|  ..+++++.|+.|++||+++++..
T Consensus       182 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~  259 (337)
T 1gxr_A          182 HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY  259 (337)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE
T ss_pred             ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE
Confidence            99999999999999999999999999999999998888775 678899999998  48999999999999999887654

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.91  E-value=1.7e-22  Score=144.81  Aligned_cols=157  Identities=17%  Similarity=0.219  Sum_probs=128.8

Q ss_pred             eEEEEecCCCceEEEeeccccccee---eceeeeeeeeccCCceEEEEe--cCc-EEEEEecCCeEEEEEcccccc----
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMT---LTCCKVESTRAHHQPITVLEC--VSN-RVITGSQDHTLKVYKLEDQQL----   76 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~--~~~-~l~~~~~d~~v~v~~~~~~~~----   76 (166)
                      +.++++++.++.+.+|+........   ........+.+|...|.+++|  ++. +|++|+.||.|++|++.++..    
T Consensus       141 ~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~  220 (430)
T 2xyi_A          141 ACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRV  220 (430)
T ss_dssp             EEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGE
T ss_pred             CcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCce
Confidence            6789999999999999986531111   113455677899999999999  445 999999999999999987322    


Q ss_pred             ---eehhcCCCCceEEEEEcC-CCCEEEEecCCCcEEEEeCcCC---eeeEEeecccccEEEEEEcCC---eEEEeecCC
Q psy16373         77 ---LFTLHGHCGPITTLFIDG-VSMMSGSGSQDGLLCVWDTVTG---ACMYSIQAHDGCIHALTYSDS---YVISLGQDE  146 (166)
Q Consensus        77 ---~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~---~~~~~~~~~~~~v~~i~~~~~---~l~~~~~d~  146 (166)
                         ...+.+|...|.+++|+| ++..+++++.|+.|++||++++   +++..+..|...|++++|+|+   .+++++.|+
T Consensus       221 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg  300 (430)
T 2xyi_A          221 IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK  300 (430)
T ss_dssp             EECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred             eccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC
Confidence               345668999999999999 6889999999999999999977   577788889999999999982   688999999


Q ss_pred             cEEEEECCc-ccceeeee
Q psy16373        147 RLCVWDRFQ-GHLLSTIQ  163 (166)
Q Consensus       147 ~i~~wd~~~-~~~~~~~~  163 (166)
                      .|++||+++ ..++..+.
T Consensus       301 ~v~vwd~~~~~~~~~~~~  318 (430)
T 2xyi_A          301 TVALWDLRNLKLKLHSFE  318 (430)
T ss_dssp             EEEEEETTCTTSCSEEEE
T ss_pred             eEEEEeCCCCCCCeEEee
Confidence            999999998 45566654

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.91  E-value=2.5e-22  Score=140.06  Aligned_cols=152  Identities=18%  Similarity=0.185  Sum_probs=125.5

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      +..+..+++|+.++.+++|+.....       ....+.+|...|.+++|  ++++|++++.|+.|++||+.+++.+..+.
T Consensus        41 s~~~~~l~~~~~dg~i~vwd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  113 (369)
T 3zwl_B           41 NKEGDLLFSCSKDSSASVWYSLNGE-------RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK  113 (369)
T ss_dssp             CTTSCEEEEEESSSCEEEEETTTCC-------EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred             cCCCCEEEEEeCCCEEEEEeCCCch-------hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee
Confidence            4456789999999999999875432       34466789999999999  78899999999999999998765544332


Q ss_pred             CCCC------------------------------------------------------------ceEEEEEcCCCCEEEE
Q psy16373         82 GHCG------------------------------------------------------------PITTLFIDGVSMMSGS  101 (166)
Q Consensus        82 ~~~~------------------------------------------------------------~v~~~~~~~~~~~~~~  101 (166)
                       +..                                                            .+.+++|+|++..+++
T Consensus       114 -~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  192 (369)
T 3zwl_B          114 -SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIA  192 (369)
T ss_dssp             -CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEE
T ss_pred             -cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEE
Confidence             222                                                            5677777777788888


Q ss_pred             ecCCCcEEEEeCcC-CeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373        102 GSQDGLLCVWDTVT-GACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       102 ~~~d~~v~~~d~~~-~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      ++.||.|++||+++ .+.+..+..|...|.+++|+|  .+|++++.|+.|++||+++++.+..+.
T Consensus       193 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~  257 (369)
T 3zwl_B          193 GHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE  257 (369)
T ss_dssp             EETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             EcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence            88889999999988 688888888999999999998  489999999999999999998887765

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.91  E-value=3.2e-22  Score=140.10  Aligned_cols=146  Identities=14%  Similarity=0.228  Sum_probs=124.2

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c--CcEEEEEecCCeEEEEEccccc--ceehh
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V--SNRVITGSQDHTLKVYKLEDQQ--LLFTL   80 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~--~~~l~~~~~d~~v~v~~~~~~~--~~~~~   80 (166)
                      +..+++|+.|+.+++|+.....     ......+.+|...|.+++|  +  +.+|++++.|+.|++||+.+..  ....+
T Consensus        69 ~~~l~s~~~dg~v~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~  143 (379)
T 3jrp_A           69 GTILASCSYDGKVLIWKEENGR-----WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII  143 (379)
T ss_dssp             CSEEEEEETTSCEEEEEEETTE-----EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEE
T ss_pred             CCEEEEeccCCEEEEEEcCCCc-----eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEe
Confidence            6789999999999999976543     1234456689999999999  4  7899999999999999998873  33456


Q ss_pred             cCCCCceEEEEEcC-------------CCCEEEEecCCCcEEEEeCcCCe----eeEEeecccccEEEEEEcCC-----e
Q psy16373         81 HGHCGPITTLFIDG-------------VSMMSGSGSQDGLLCVWDTVTGA----CMYSIQAHDGCIHALTYSDS-----Y  138 (166)
Q Consensus        81 ~~~~~~v~~~~~~~-------------~~~~~~~~~~d~~v~~~d~~~~~----~~~~~~~~~~~v~~i~~~~~-----~  138 (166)
                      ..|...|.+++|+|             ++..+++++.|+.|++||++++.    ....+.+|...|.+++|+|+     +
T Consensus       144 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~  223 (379)
T 3jrp_A          144 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY  223 (379)
T ss_dssp             ECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred             cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCe
Confidence            68999999999999             68999999999999999998764    45667889999999999974     7


Q ss_pred             EEEeecCCcEEEEECCccc
Q psy16373        139 VISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       139 l~~~~~d~~i~~wd~~~~~  157 (166)
                      +++++.|+.|++||++++.
T Consensus       224 l~s~~~dg~i~iwd~~~~~  242 (379)
T 3jrp_A          224 LASVSQDRTCIIWTQDNEQ  242 (379)
T ss_dssp             EEEEETTSCEEEEEESSTT
T ss_pred             EEEEeCCCEEEEEeCCCCC
Confidence            9999999999999998864

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.91  E-value=1.6e-22  Score=143.59  Aligned_cols=147  Identities=16%  Similarity=0.179  Sum_probs=127.1

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeee-ccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR-AHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      ..+++++.++.+++|+.......       ..+. .|...|.+++|  ++++|++|+.||.|++||+.+++.+..+.+|.
T Consensus       104 ~~l~~~~~d~~v~lw~~~~~~~~-------~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  176 (401)
T 4aez_A          104 LNVVAVALERNVYVWNADSGSVS-------ALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQ  176 (401)
T ss_dssp             TSEEEEEETTEEEEEETTTCCEE-------EEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS
T ss_pred             CCEEEEECCCeEEEeeCCCCcEe-------EeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCC
Confidence            45777888999999998654311       1222 37889999999  78899999999999999999999999999999


Q ss_pred             CceEEEEEcCCCCEEEEecCCCcEEEEeCc-CCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceee
Q psy16373         85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTV-TGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLST  161 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~-~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~  161 (166)
                      ..|.+++|+  +..+++++.||.+++||++ ....+..+.+|...|.+++|+|  ..+++++.|+.|++||+++++.+..
T Consensus       177 ~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~  254 (401)
T 4aez_A          177 ARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFT  254 (401)
T ss_dssp             SCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEE
T ss_pred             CceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEE
Confidence            999999994  5799999999999999999 5677888899999999999998  4899999999999999999888776


Q ss_pred             ee
Q psy16373        162 IQ  163 (166)
Q Consensus       162 ~~  163 (166)
                      +.
T Consensus       255 ~~  256 (401)
T 4aez_A          255 KT  256 (401)
T ss_dssp             EC
T ss_pred             ec
Confidence            64

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.91  E-value=5.4e-23  Score=152.23  Aligned_cols=143  Identities=13%  Similarity=0.204  Sum_probs=125.9

Q ss_pred             eEEEEecCC-CceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC-
Q psy16373          7 RIHLRTGSA-GSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG-   82 (166)
Q Consensus         7 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~-   82 (166)
                      +..+++++. ++.+++|+......     .. ..+.+|...|.+++|  ++++|++++.|+.|++||+.+++.+..+.+ 
T Consensus       456 ~~~l~~~~~~d~~i~~~~~~~~~~-----~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~  529 (615)
T 1pgu_A          456 QNYVAVGLEEGNTIQVFKLSDLEV-----SF-DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAF  529 (615)
T ss_dssp             SSEEEEEETTTSCEEEEETTEEEE-----EE-ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCC
T ss_pred             CCEEEEeecCCCeEEEEECCCccc-----cc-cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecC
Confidence            456778888 89999999865421     11 456689999999999  889999999999999999999999998888 


Q ss_pred             CCCceEEEEEcC----------CCCEEEEecCCCcEEEEeCcCC-eeeEEeecccccEEEEEEcC-CeEEEeecCCcEEE
Q psy16373         83 HCGPITTLFIDG----------VSMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDGCIHALTYSD-SYVISLGQDERLCV  150 (166)
Q Consensus        83 ~~~~v~~~~~~~----------~~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~  150 (166)
                      |...|++++|+|          ++.++++++.|+.|++||++++ +++..+.+|...|++++|+| +.|++++.|+.|++
T Consensus       530 h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~l~s~~~d~~v~i  609 (615)
T 1pgu_A          530 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKR  609 (615)
T ss_dssp             CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTEEEEEETTSCEEE
T ss_pred             CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCCeEEecCCceEEE
Confidence            999999999999          9999999999999999999988 78888999999999999998 24999999999999


Q ss_pred             EECCc
Q psy16373        151 WDRFQ  155 (166)
Q Consensus       151 wd~~~  155 (166)
                      |++.+
T Consensus       610 w~~~~  614 (615)
T 1pgu_A          610 WNVVL  614 (615)
T ss_dssp             EEEC-
T ss_pred             Eeeec
Confidence            99865

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.91  E-value=2.4e-22  Score=140.61  Aligned_cols=146  Identities=10%  Similarity=0.089  Sum_probs=122.0

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccccee--h
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF--T   79 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~--~   79 (166)
                      +..+..+++|+.++.+++|+.....     ......+.+|...|.+++|  ++++|++++.|+.|++||+++++...  .
T Consensus        17 s~~~~~l~~~~~d~~v~i~~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~   91 (372)
T 1k8k_C           17 NKDRTQIAICPNNHEVHIYEKSGNK-----WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLV   91 (372)
T ss_dssp             CTTSSEEEEECSSSEEEEEEEETTE-----EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred             CCCCCEEEEEeCCCEEEEEeCCCCc-----EEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEE
Confidence            3456789999999999999976432     1245567789999999999  78899999999999999998876443  3


Q ss_pred             hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee---eEE-eecccccEEEEEEcC--CeEEEeecCCcEEEEEC
Q psy16373         80 LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC---MYS-IQAHDGCIHALTYSD--SYVISLGQDERLCVWDR  153 (166)
Q Consensus        80 ~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~---~~~-~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~  153 (166)
                      +..|...|.+++|+|++.++++++.|+.+++||++.+..   ... ...|...|.+++|+|  ..+++++.|+.|++||+
T Consensus        92 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~  171 (372)
T 1k8k_C           92 ILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA  171 (372)
T ss_dssp             CCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred             eecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEc
Confidence            456889999999999999999999999999999987763   233 356788999999998  48999999999999996


Q ss_pred             C
Q psy16373        154 F  154 (166)
Q Consensus       154 ~  154 (166)
                      +
T Consensus       172 ~  172 (372)
T 1k8k_C          172 Y  172 (372)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.91  E-value=5.6e-22  Score=138.95  Aligned_cols=103  Identities=18%  Similarity=0.261  Sum_probs=89.7

Q ss_pred             cEEEE--EecCCeEEEEEccccc----------------ceehhcCCCCceEEEEEcCCCCEEEEecCCCc-EEEEeCcC
Q psy16373         55 NRVIT--GSQDHTLKVYKLEDQQ----------------LLFTLHGHCGPITTLFIDGVSMMSGSGSQDGL-LCVWDTVT  115 (166)
Q Consensus        55 ~~l~~--~~~d~~v~v~~~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~-v~~~d~~~  115 (166)
                      ..++.  |+.||.|++||+.+++                .+..+.+|...|.+++|+|++.++++++.|++ |++||+++
T Consensus       148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~  227 (355)
T 3vu4_A          148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED  227 (355)
T ss_dssp             TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred             cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence            34444  5788999999998765                26778899999999999999999999999998 99999999


Q ss_pred             CeeeEEee-c-ccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373        116 GACMYSIQ-A-HDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       116 ~~~~~~~~-~-~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      ++++..+. + |...|.+++|+|  .+|++++.|+.|++||++.+.
T Consensus       228 ~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~  273 (355)
T 3vu4_A          228 GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ  273 (355)
T ss_dssp             CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred             CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence            99999998 5 899999999999  489999999999999998764

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.91  E-value=2.6e-22  Score=143.33  Aligned_cols=153  Identities=20%  Similarity=0.279  Sum_probs=124.7

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEE--EecCCeEEEEEcccccceeh
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVIT--GSQDHTLKVYKLEDQQLLFT   79 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~--~~~d~~v~v~~~~~~~~~~~   79 (166)
                      ..+..+++++.|+.+.+|+.......   .........|...|.+++|   .+..+++  |+.|+.|++||+.+++....
T Consensus       240 ~~g~~l~s~~~D~~v~i~~~~~~~~~---~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~  316 (420)
T 4gga_A          240 PDGRHLASGGNDNLVNVWPSAPGEGG---WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA  316 (420)
T ss_dssp             TTSSEEEEEETTSCEEEEESSCCSSC---SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEE
T ss_pred             CCCCeeeeeeccccceEEeecccccc---ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccccee
Confidence            34567899999999999987654321   1233455688999999999   4566665  45799999999999998887


Q ss_pred             hcCCCCceEEEEEcCCCCEEEEec--CCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373         80 LHGHCGPITTLFIDGVSMMSGSGS--QDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        80 ~~~~~~~v~~~~~~~~~~~~~~~~--~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~  155 (166)
                      +..+ ..+.++.++|++..+++++  .|+.|++||+++++++..+.+|.+.|++++|+|  .+|++++.|++|++||+.+
T Consensus       317 ~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~  395 (420)
T 4gga_A          317 VDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE  395 (420)
T ss_dssp             EECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred             eccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence            7744 5788999999988887654  789999999999999999999999999999998  4899999999999999987


Q ss_pred             ccceee
Q psy16373        156 GHLLST  161 (166)
Q Consensus       156 ~~~~~~  161 (166)
                      ..+..+
T Consensus       396 ~~~~~~  401 (420)
T 4gga_A          396 LDPARR  401 (420)
T ss_dssp             SSCC--
T ss_pred             CCccch
Confidence            665543

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.91  E-value=1.5e-22  Score=141.12  Aligned_cols=151  Identities=15%  Similarity=0.088  Sum_probs=132.3

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      ..+..+++++.++.+.+|+.....      .....+..|..+|.+++|  ++.+|++++.|+.|++||+++++.+..+. 
T Consensus       185 ~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-  257 (369)
T 3zwl_B          185 TKGKYIIAGHKDGKISKYDVSNNY------EYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-  257 (369)
T ss_dssp             GGGCEEEEEETTSEEEEEETTTTT------EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred             CCCCEEEEEcCCCEEEEEECCCCc------EeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-
Confidence            345688999999999999986532      234466789999999999  88899999999999999999998888777 


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCC--------------cEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCC
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDG--------------LLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDE  146 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~--------------~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~  146 (166)
                      +...+.+++++|++..+++++.++              .+++||..+++.+..+.+|...|++++|+|  .+|++++.|+
T Consensus       258 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  337 (369)
T 3zwl_B          258 TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDG  337 (369)
T ss_dssp             CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCC
Confidence            778899999999999999999888              899999999999999999999999999998  4899999999


Q ss_pred             cEEEEECCcccceeee
Q psy16373        147 RLCVWDRFQGHLLSTI  162 (166)
Q Consensus       147 ~i~~wd~~~~~~~~~~  162 (166)
                      .|++|+++++.....+
T Consensus       338 ~v~iw~~~~~~~~~~~  353 (369)
T 3zwl_B          338 FIRLHHFEKSYFDFKY  353 (369)
T ss_dssp             EEEEEEECHHHHTCCC
T ss_pred             eEEEEECccccchhHH
Confidence            9999999887665544

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.91  E-value=1.3e-22  Score=154.29  Aligned_cols=150  Identities=14%  Similarity=0.160  Sum_probs=128.6

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c--CcEEEEEecCCeEEEEEccccc--ce
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V--SNRVITGSQDHTLKVYKLEDQQ--LL   77 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~--~~~l~~~~~d~~v~v~~~~~~~--~~   77 (166)
                      +..+..+++|+.++.+++|+.....     ......+.+|..+|.+++|  +  +++|++|+.||.|++||+.+++  ..
T Consensus        18 s~dg~~latg~~dg~I~vwd~~~~~-----~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~   92 (753)
T 3jro_A           18 DYYGKRLATCSSDKTIKIFEVEGET-----HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQI   92 (753)
T ss_dssp             CSSSCCEEEEETTTEEEEEEEETTE-----EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEE
T ss_pred             CCCCCeEEEEECCCcEEEEecCCCC-----CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccc
Confidence            4556789999999999999976322     2344567799999999999  4  7899999999999999999886  66


Q ss_pred             ehhcCCCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCC--eeeEEeecccccEEEEEEcC---------------Ce
Q psy16373         78 FTLHGHCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTG--ACMYSIQAHDGCIHALTYSD---------------SY  138 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~--~~~~~~~~~~~~v~~i~~~~---------------~~  138 (166)
                      ..+.+|...|.+++|+|+  +..+++++.||.|++||++++  .....+.+|...|.++.|+|               ..
T Consensus        93 ~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~  172 (753)
T 3jro_A           93 AVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK  172 (753)
T ss_dssp             EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCC
T ss_pred             ccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCE
Confidence            777889999999999999  999999999999999999877  34456678899999999987               38


Q ss_pred             EEEeecCCcEEEEECCcccc
Q psy16373        139 VISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus       139 l~~~~~d~~i~~wd~~~~~~  158 (166)
                      +++++.|+.|++||++++..
T Consensus       173 l~sgs~dg~I~iwd~~~~~~  192 (753)
T 3jro_A          173 FVTGGADNLVKIWKYNSDAQ  192 (753)
T ss_dssp             EEEEETTSCEEEEEEETTTT
T ss_pred             EEEEECCCeEEEEeccCCcc
Confidence            99999999999999988743

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.91  E-value=2.2e-22  Score=142.78  Aligned_cols=142  Identities=18%  Similarity=0.148  Sum_probs=127.9

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG   85 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~   85 (166)
                      ..+++++.++.+.+|+.....       ....+.+|..+|.+++|  ++++|++++.|+.|++||+.+++.+..+..|..
T Consensus       218 ~~~~~~~~~g~i~~~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  290 (425)
T 1r5m_A          218 DKFVIPGPKGAIFVYQITEKT-------PTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQ  290 (425)
T ss_dssp             TEEEEECGGGCEEEEETTCSS-------CSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSS
T ss_pred             CEEEEEcCCCeEEEEEcCCCc-------eeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCc
Confidence            357888889999999976542       23355688999999999  788999999999999999999999888889999


Q ss_pred             ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373         86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      .|.+++|+|++ .+++++.|+.+++||+++++.+..+..|...|.+++|+|  .++++++.|+.|++||+++++
T Consensus       291 ~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~  363 (425)
T 1r5m_A          291 SIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN  363 (425)
T ss_dssp             CEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred             cEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence            99999999999 999999999999999999999999999999999999998  589999999999999999887

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.91  E-value=4.7e-22  Score=140.47  Aligned_cols=150  Identities=15%  Similarity=0.233  Sum_probs=118.8

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCc-EEEEEecCCeEEEEEccccc-ceehh-
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSN-RVITGSQDHTLKVYKLEDQQ-LLFTL-   80 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~-~l~~~~~d~~v~v~~~~~~~-~~~~~-   80 (166)
                      ....+++++.++.+.+|+.....       ....+.+|..+|.+++|  ++. .+++++.|+.|++||++++. ....+ 
T Consensus       155 ~~~~~~~~~~~~~v~~~d~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~  227 (408)
T 4a11_B          155 KHCLVAVGTRGPKVQLCDLKSGS-------CSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLD  227 (408)
T ss_dssp             SCCEEEEEESSSSEEEEESSSSC-------CCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECC
T ss_pred             CCcEEEEEcCCCeEEEEeCCCcc-------eeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccc
Confidence            44588999999999999986443       23456789999999999  455 69999999999999998654 22222 


Q ss_pred             --------------cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC------------------------------
Q psy16373         81 --------------HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG------------------------------  116 (166)
Q Consensus        81 --------------~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~------------------------------  116 (166)
                                    ..|...|.+++|+|++.++++++.|+.+++||++++                              
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (408)
T 4a11_B          228 QHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEF  307 (408)
T ss_dssp             TTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCE
T ss_pred             ccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceE
Confidence                          568899999999999999999999999999998754                              


Q ss_pred             -----------------eeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeee
Q psy16373        117 -----------------ACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       117 -----------------~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                                       +++..+.+|...|++++|+|  .+|++++.|+.|++||+++++++...
T Consensus       308 ~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~  372 (408)
T 4a11_B          308 VFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDD  372 (408)
T ss_dssp             EEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-------
T ss_pred             EEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCC
Confidence                             34556677899999999998  48999999999999999998877643

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.90  E-value=3.6e-22  Score=142.99  Aligned_cols=155  Identities=14%  Similarity=0.158  Sum_probs=122.9

Q ss_pred             EEEEecCCCceEEEeecccccceee--------------------------------ceeeeee-eeccCCceEEEEe--
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTL--------------------------------TCCKVES-TRAHHQPITVLEC--   52 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~-~~~~~~~i~~~~~--   52 (166)
                      ..+++++.|+.+++|+.........                                ....... ..+|...|.+++|  
T Consensus       108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~  187 (447)
T 3dw8_B          108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS  187 (447)
T ss_dssp             SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred             ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence            5788999999999999865321100                                0001112 3579999999999  


Q ss_pred             cCcEEEEEecCCeEEEEEccc-cccee-------hhcCCCCceEEEEEcCCC-CEEEEecCCCcEEEEeCcCCee----e
Q psy16373         53 VSNRVITGSQDHTLKVYKLED-QQLLF-------TLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGAC----M  119 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~----~  119 (166)
                      ++++|++| .|+.|++||+++ ++...       .+.+|...|.+++|+|++ ..+++++.||.|++||+++++.    +
T Consensus       188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  266 (447)
T 3dw8_B          188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHS  266 (447)
T ss_dssp             TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTC
T ss_pred             CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccccee
Confidence            78899998 799999999994 44433       466899999999999998 9999999999999999998886    6


Q ss_pred             EEeecccc------------cEEEEEEcC--CeEEEeecCCcEEEEECCc-ccceeeeee
Q psy16373        120 YSIQAHDG------------CIHALTYSD--SYVISLGQDERLCVWDRFQ-GHLLSTIQL  164 (166)
Q Consensus       120 ~~~~~~~~------------~v~~i~~~~--~~l~~~~~d~~i~~wd~~~-~~~~~~~~~  164 (166)
                      ..+..|..            .|.+++|+|  .+|++++. +.|++||+++ ++++..+..
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~  325 (447)
T 3dw8_B          267 KLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQV  325 (447)
T ss_dssp             EEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEES
T ss_pred             eEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeec
Confidence            77887776            899999998  48888888 9999999997 777776653

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.90  E-value=1.9e-22  Score=140.64  Aligned_cols=130  Identities=22%  Similarity=0.335  Sum_probs=113.8

Q ss_pred             eeeeeeeccCCceEEEEe--c---CcEEEEEecCCeEEEEEccc-ccce-ehhcCCCCceEEEEEcCCCCEEEEecCCCc
Q psy16373         35 CKVESTRAHHQPITVLEC--V---SNRVITGSQDHTLKVYKLED-QQLL-FTLHGHCGPITTLFIDGVSMMSGSGSQDGL  107 (166)
Q Consensus        35 ~~~~~~~~~~~~i~~~~~--~---~~~l~~~~~d~~v~v~~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~  107 (166)
                      .....+.+|...|.+++|  +   +++|++|+.|+.|++||+.+ ++.+ ..+.+|...|.+++|+|++.++++++.||.
T Consensus        30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~  109 (368)
T 3mmy_A           30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT  109 (368)
T ss_dssp             CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence            445567799999999999  4   48999999999999999997 4444 677889999999999999999999999999


Q ss_pred             EEEEeCcCCeeeEEeecccccEEEEEE--cC--CeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        108 LCVWDTVTGACMYSIQAHDGCIHALTY--SD--SYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       108 v~~~d~~~~~~~~~~~~~~~~v~~i~~--~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      |++||+++++.+. +..|...|.+++|  ++  ..+++++.|+.|++||+++++.+..+..+
T Consensus       110 v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~  170 (368)
T 3mmy_A          110 AKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP  170 (368)
T ss_dssp             EEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS
T ss_pred             EEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC
Confidence            9999999988766 5568999999999  66  37999999999999999999988877643

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.90  E-value=2.9e-22  Score=139.42  Aligned_cols=147  Identities=11%  Similarity=0.062  Sum_probs=121.8

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEec-----CcEEEEEecCCeEEEEEccccccee
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECV-----SNRVITGSQDHTLKVYKLEDQQLLF   78 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~l~~~~~d~~v~v~~~~~~~~~~   78 (166)
                      +..+..+++++.++.+++|+......        .....|...|.+++|.     ++.+++++.|+.|++||+++++...
T Consensus       177 ~~~~~~l~~~~~d~~i~i~d~~~~~~--------~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~  248 (357)
T 3i2n_A          177 NQEERVVCAGYDNGDIKLFDLRNMAL--------RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK  248 (357)
T ss_dssp             C-CCCEEEEEETTSEEEEEETTTTEE--------EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT
T ss_pred             CCCCCEEEEEccCCeEEEEECccCce--------eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc
Confidence            35677899999999999999865431        1235678899999993     5889999999999999999887766


Q ss_pred             hhc-----CCCCceEEEEEcCCCC-EEEEecCCCcEEEEeCcCC-------------------eeeEEeecccccEEEEE
Q psy16373         79 TLH-----GHCGPITTLFIDGVSM-MSGSGSQDGLLCVWDTVTG-------------------ACMYSIQAHDGCIHALT  133 (166)
Q Consensus        79 ~~~-----~~~~~v~~~~~~~~~~-~~~~~~~d~~v~~~d~~~~-------------------~~~~~~~~~~~~v~~i~  133 (166)
                      .+.     +|...|.+++|+|++. ++++++.||.+++||++++                   +.+..+.+|..+|++++
T Consensus       249 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~  328 (357)
T 3i2n_A          249 GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLD  328 (357)
T ss_dssp             EEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEE
T ss_pred             ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEE
Confidence            655     8999999999999988 8999999999999999754                   35677888999999999


Q ss_pred             EcCC--eEE-EeecCCcEEEEECCcccc
Q psy16373        134 YSDS--YVI-SLGQDERLCVWDRFQGHL  158 (166)
Q Consensus       134 ~~~~--~l~-~~~~d~~i~~wd~~~~~~  158 (166)
                      |+|+  .++ +++.|+.|++||+.+.+.
T Consensus       329 ~s~~~~~l~~s~~~d~~i~iw~~~~~~~  356 (357)
T 3i2n_A          329 WSPDKRGLCVCSSFDQTVRVLIVTKLNK  356 (357)
T ss_dssp             ECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred             EcCCCCeEEEEecCCCcEEEEECCCccc
Confidence            9983  676 899999999999987654

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.90  E-value=8.4e-23  Score=144.93  Aligned_cols=158  Identities=12%  Similarity=0.181  Sum_probs=131.8

Q ss_pred             eEEEEecCCCceEEEeecccccceee--ceeeeeeeeccCCceEEEEe--c-CcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTL--TCCKVESTRAHHQPITVLEC--V-SNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~--~-~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      +..+++++.++.+++|+.........  .........+|...|.+++|  + +.+|++++.|+.|++||+++++.+..+.
T Consensus       126 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~  205 (416)
T 2pm9_A          126 DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLS  205 (416)
T ss_dssp             TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEEC
T ss_pred             CCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEe
Confidence            56889999999999999865541100  11112234678999999999  4 6799999999999999999998888777


Q ss_pred             CC------CCceEEEEEcCCC-CEEEEecCCC---cEEEEeCcCC-eeeEEee-cccccEEEEEEcC---CeEEEeecCC
Q psy16373         82 GH------CGPITTLFIDGVS-MMSGSGSQDG---LLCVWDTVTG-ACMYSIQ-AHDGCIHALTYSD---SYVISLGQDE  146 (166)
Q Consensus        82 ~~------~~~v~~~~~~~~~-~~~~~~~~d~---~v~~~d~~~~-~~~~~~~-~~~~~v~~i~~~~---~~l~~~~~d~  146 (166)
                      .+      ...|.+++|+|++ ..+++++.|+   .|++||++++ .++..+. +|...|.+++|+|   .++++++.|+
T Consensus       206 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg  285 (416)
T 2pm9_A          206 YTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN  285 (416)
T ss_dssp             CCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS
T ss_pred             ccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCC
Confidence            66      7889999999996 6899999998   9999999986 6777787 8999999999987   4899999999


Q ss_pred             cEEEEECCcccceeeeee
Q psy16373        147 RLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       147 ~i~~wd~~~~~~~~~~~~  164 (166)
                      .|++||+++++++..+..
T Consensus       286 ~v~~wd~~~~~~~~~~~~  303 (416)
T 2pm9_A          286 TVLLWNPESAEQLSQFPA  303 (416)
T ss_dssp             EEEEECSSSCCEEEEEEC
T ss_pred             CEEEeeCCCCccceeecC
Confidence            999999999998887764

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.90  E-value=1.1e-21  Score=134.51  Aligned_cols=155  Identities=17%  Similarity=0.210  Sum_probs=118.3

Q ss_pred             ccceEEEEecCCCceEEEeecccccceee----------------------------------ceeeeeeeeccCCceEE
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTL----------------------------------TCCKVESTRAHHQPITV   49 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~i~~   49 (166)
                      +..+..+++|+.|+.+++|+.+..+....                                  .......+.+|...+.+
T Consensus        76 ~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (318)
T 4ggc_A           76 IKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCG  155 (318)
T ss_dssp             CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEE
T ss_pred             CCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEE
Confidence            45667888889999988888754332110                                  01223445688899999


Q ss_pred             EEe--cCcEEEEEecCCeEEEEEcccccceeh----h-------------------------------------------
Q psy16373         50 LEC--VSNRVITGSQDHTLKVYKLEDQQLLFT----L-------------------------------------------   80 (166)
Q Consensus        50 ~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~----~-------------------------------------------   80 (166)
                      +.+  .++++++++.|+.|++||+++++....    .                                           
T Consensus       156 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~  235 (318)
T 4ggc_A          156 LRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS  235 (318)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEE
T ss_pred             EEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccc
Confidence            999  888999999999999999976532110    0                                           


Q ss_pred             -cCCCCceEEEEEcCCCCEEEEe--cCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373         81 -HGHCGPITTLFIDGVSMMSGSG--SQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        81 -~~~~~~v~~~~~~~~~~~~~~~--~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~  155 (166)
                       ..+...+..+.++|.+..++++  +.|+.|++||+++++++..+.+|.+.|++++|+|  .+|++++.|++|++||+.+
T Consensus       236 ~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~  315 (318)
T 4ggc_A          236 AVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE  315 (318)
T ss_dssp             EEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred             cccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence             1123345677778877766654  4799999999999999999999999999999998  4899999999999999977


Q ss_pred             ccc
Q psy16373        156 GHL  158 (166)
Q Consensus       156 ~~~  158 (166)
                      ..+
T Consensus       316 ~dP  318 (318)
T 4ggc_A          316 LDP  318 (318)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.90  E-value=1.5e-21  Score=144.48  Aligned_cols=126  Identities=17%  Similarity=0.218  Sum_probs=112.3

Q ss_pred             eeccCCceEEEEe--cCc-EEEEEecCCeEEEEEcccccceehhcCCCC---ceEEEEEcCC-CCEEEEecCCCcEEEEe
Q psy16373         40 TRAHHQPITVLEC--VSN-RVITGSQDHTLKVYKLEDQQLLFTLHGHCG---PITTLFIDGV-SMMSGSGSQDGLLCVWD  112 (166)
Q Consensus        40 ~~~~~~~i~~~~~--~~~-~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~~~~~~~d~~v~~~d  112 (166)
                      +.+|...|.+++|  ++. .+++++.|+.|++||+.+++.+..+.+|..   .|.+++|+|+ ++++++++.|+.+++||
T Consensus       156 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd  235 (615)
T 1pgu_A          156 VSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFD  235 (615)
T ss_dssp             CCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEE
T ss_pred             eecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence            4456777888888  443 799999999999999999999999999998   9999999999 99999999999999999


Q ss_pred             CcCCeeeEEe-e---cccccEEEEEEc-CCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        113 TVTGACMYSI-Q---AHDGCIHALTYS-DSYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       113 ~~~~~~~~~~-~---~~~~~v~~i~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      +++++.+..+ .   .|...|.+++|+ ...+++++.|+.|++||+++++.+..+..+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  293 (615)
T 1pgu_A          236 GKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLD  293 (615)
T ss_dssp             TTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             CCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence            9999999988 6   899999999996 358999999999999999999888877643

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.90  E-value=1.7e-22  Score=143.39  Aligned_cols=147  Identities=15%  Similarity=0.170  Sum_probs=126.5

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeec------cCCceEEEEe--cC-cEEEEEecCC---eEEEEEcccc
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRA------HHQPITVLEC--VS-NRVITGSQDH---TLKVYKLEDQ   74 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~--~~-~~l~~~~~d~---~v~v~~~~~~   74 (166)
                      +..+++++.++.+++|+......       ...+..      |...|.+++|  ++ .++++++.|+   .|++||++++
T Consensus       178 ~~~l~~~~~dg~v~iwd~~~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~  250 (416)
T 2pm9_A          178 AHVFASAGSSNFASIWDLKAKKE-------VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA  250 (416)
T ss_dssp             TTEEEEESSSSCEEEEETTTTEE-------EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred             CcEEEEEcCCCCEEEEECCCCCc-------ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence            56889999999999999865431       222233      3789999999  43 5899999998   9999999986


Q ss_pred             -cceehhc-CCCCceEEEEEcC-CCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC---CeEEEeecCCcE
Q psy16373         75 -QLLFTLH-GHCGPITTLFIDG-VSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD---SYVISLGQDERL  148 (166)
Q Consensus        75 -~~~~~~~-~~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i  148 (166)
                       +.+..+. +|...|.+++|+| ++.++++++.|+.+++||+++++++..+..|...|.+++|+|   .++++++.|+.|
T Consensus       251 ~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i  330 (416)
T 2pm9_A          251 NTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKI  330 (416)
T ss_dssp             TSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEE
T ss_pred             CCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcE
Confidence             6677777 8999999999999 899999999999999999999999999999999999999998   489999999999


Q ss_pred             EEEECCccccee
Q psy16373        149 CVWDRFQGHLLS  160 (166)
Q Consensus       149 ~~wd~~~~~~~~  160 (166)
                      ++||+.++....
T Consensus       331 ~iw~~~~~~~~~  342 (416)
T 2pm9_A          331 EVQTLQNLTNTL  342 (416)
T ss_dssp             EEEESCCCCCSS
T ss_pred             EEEEccCCCCCc
Confidence            999998876543

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.90  E-value=1.8e-22  Score=140.64  Aligned_cols=146  Identities=10%  Similarity=0.002  Sum_probs=115.6

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeee-eccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccce-ehhc
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVEST-RAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL-FTLH   81 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~-~~~~   81 (166)
                      .+..+++|+.|+.+++|+......       .... ..|...+.+++|  ++.+|++|+.|+.|++||+++++.+ ..+.
T Consensus       138 ~~~~l~s~s~dg~i~~wd~~~~~~-------~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~  210 (343)
T 3lrv_A          138 NTEYFIWADNRGTIGFQSYEDDSQ-------YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFP  210 (343)
T ss_dssp             -CCEEEEEETTCCEEEEESSSSCE-------EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECC
T ss_pred             CCCEEEEEeCCCcEEEEECCCCcE-------EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEe
Confidence            567899999999999999875442       1122 245567999999  7889999999999999999999877 7788


Q ss_pred             C-CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec---ccccEE--EEEEcC--CeEEEeec-CCcEEEEE
Q psy16373         82 G-HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA---HDGCIH--ALTYSD--SYVISLGQ-DERLCVWD  152 (166)
Q Consensus        82 ~-~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~---~~~~v~--~i~~~~--~~l~~~~~-d~~i~~wd  152 (166)
                      . |..+|.+++|+|++.++++++ ++.|++||+++++.+..+..   |...+.  +++|+|  .++++++. |+.|++|+
T Consensus       211 ~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~  289 (343)
T 3lrv_A          211 VDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYK  289 (343)
T ss_dssp             CCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             ccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEE
Confidence            7 999999999999999999999 45999999998877655543   333443  599998  48888888 99999999


Q ss_pred             CCcccce
Q psy16373        153 RFQGHLL  159 (166)
Q Consensus       153 ~~~~~~~  159 (166)
                      +.+....
T Consensus       290 ~~~~~~~  296 (343)
T 3lrv_A          290 FDKKTKN  296 (343)
T ss_dssp             ECTTTCS
T ss_pred             Ecccccc
Confidence            8665443

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.90  E-value=2.3e-22  Score=142.64  Aligned_cols=142  Identities=18%  Similarity=0.074  Sum_probs=124.9

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      .+..+++++.++.+++|+.....       ....+.+|...|.+++| ....+++++.|+.|++||+.+++.+..+..|.
T Consensus       258 ~~~~l~~~~~d~~i~i~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  330 (425)
T 1r5m_A          258 TNKLLLSASDDGTLRIWHGGNGN-------SQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDG  330 (425)
T ss_dssp             TTTEEEEEETTSCEEEECSSSBS-------CSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTT
T ss_pred             CCCEEEEEcCCCEEEEEECCCCc-------cceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCC
Confidence            44578899999999999976533       23355678999999999 33399999999999999999999999999999


Q ss_pred             CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe--------------------eeEEeecccc--cEEEEEEcC--CeEE
Q psy16373         85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA--------------------CMYSIQAHDG--CIHALTYSD--SYVI  140 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~--------------------~~~~~~~~~~--~v~~i~~~~--~~l~  140 (166)
                      ..+.+++|+|++.++++++.||.|++||+++++                    .+..+..|..  .|++++|+|  .+|+
T Consensus       331 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  410 (425)
T 1r5m_A          331 VPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKIS  410 (425)
T ss_dssp             CCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEE
T ss_pred             ccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEE
Confidence            999999999999999999999999999999888                    8888988876  999999998  4899


Q ss_pred             EeecCCcEEEEECC
Q psy16373        141 SLGQDERLCVWDRF  154 (166)
Q Consensus       141 ~~~~d~~i~~wd~~  154 (166)
                      +++.|+.|++||++
T Consensus       411 ~~~~dg~i~iw~~~  424 (425)
T 1r5m_A          411 VAYSLQEGSVVAIP  424 (425)
T ss_dssp             EEESSSCCEEEECC
T ss_pred             EEecCceEEEEeec
Confidence            99999999999985

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.89  E-value=1.1e-21  Score=136.54  Aligned_cols=149  Identities=16%  Similarity=0.209  Sum_probs=120.6

Q ss_pred             EEEEecCC---CceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c---CcEEEEEecCCeEEEEEccccc-cee
Q psy16373          8 IHLRTGSA---GSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V---SNRVITGSQDHTLKVYKLEDQQ-LLF   78 (166)
Q Consensus         8 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~---~~~l~~~~~d~~v~v~~~~~~~-~~~   78 (166)
                      .++++|+.   ++.+++|+.......      .....+|..+|.+++|  +   +++|++++.|+.|++||+.+++ .+.
T Consensus        32 ~l~~~~s~~~~d~~v~iw~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  105 (357)
T 3i2n_A           32 KFVTMGNFARGTGVIQLYEIQHGDLK------LLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVY  105 (357)
T ss_dssp             EEEEEEC--CCCEEEEEEEECSSSEE------EEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSE
T ss_pred             eEEEecCccCCCcEEEEEeCCCCccc------ceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEE
Confidence            56777776   899999998654311      1122378899999999  4   5899999999999999999887 888


Q ss_pred             hhcCCCCceEEEEE------cCCCCEEEEecCCCcEEEEeCcCCe-eeEEeecccc----cEEEEE----EcC--CeEEE
Q psy16373         79 TLHGHCGPITTLFI------DGVSMMSGSGSQDGLLCVWDTVTGA-CMYSIQAHDG----CIHALT----YSD--SYVIS  141 (166)
Q Consensus        79 ~~~~~~~~v~~~~~------~~~~~~~~~~~~d~~v~~~d~~~~~-~~~~~~~~~~----~v~~i~----~~~--~~l~~  141 (166)
                      .+.+|...|.++++      +|+++.+++++.|+.+++||+++++ ++..+..|.+    .+.+++    |++  ..+++
T Consensus       106 ~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~  185 (357)
T 3i2n_A          106 SVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCA  185 (357)
T ss_dssp             EECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEE
T ss_pred             EEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEE
Confidence            88999999999954      6789999999999999999999886 6777766554    788888    455  58999


Q ss_pred             eecCCcEEEEECCcccceeee
Q psy16373        142 LGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       142 ~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      ++.|+.|++||+++++.+...
T Consensus       186 ~~~d~~i~i~d~~~~~~~~~~  206 (357)
T 3i2n_A          186 GYDNGDIKLFDLRNMALRWET  206 (357)
T ss_dssp             EETTSEEEEEETTTTEEEEEE
T ss_pred             EccCCeEEEEECccCceeeec
Confidence            999999999999998875543

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.89  E-value=8.5e-22  Score=152.27  Aligned_cols=143  Identities=17%  Similarity=0.192  Sum_probs=120.2

Q ss_pred             EEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccce---------
Q psy16373          9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL---------   77 (166)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~---------   77 (166)
                      ++++++.|+.+++|+.....       .+..+. |...|.+++|  ++++|++|+.||.|++||+++++..         
T Consensus        71 ~L~S~s~D~~v~lWd~~~~~-------~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~  142 (902)
T 2oaj_A           71 YLVVINAKDTVYVLSLYSQK-------VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQK  142 (902)
T ss_dssp             EEEEEETTCEEEEEETTTCS-------EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHH
T ss_pred             EEEEEECcCeEEEEECCCCc-------EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccc
Confidence            68888888899988876432       122332 6678999999  8899999999999999999987653         


Q ss_pred             --ehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeEEeecc------------------cccEEEEEEcC
Q psy16373         78 --FTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMYSIQAH------------------DGCIHALTYSD  136 (166)
Q Consensus        78 --~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~------------------~~~v~~i~~~~  136 (166)
                        ..+.+|.+.|.+++|+|+ +..+++++.|+.+ +||+++++++..+..|                  ...|++++|+|
T Consensus       143 ~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp  221 (902)
T 2oaj_A          143 SSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP  221 (902)
T ss_dssp             HHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT
T ss_pred             cccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC
Confidence              344679999999999996 5789999999999 9999999988888765                  46799999998


Q ss_pred             --CeEEEeecCCcEEEEECCccccee
Q psy16373        137 --SYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus       137 --~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                        .+|++++.|+.|++||+++++++.
T Consensus       222 dg~~lasgs~Dg~i~lWd~~~g~~~~  247 (902)
T 2oaj_A          222 NSLHIITIHEDNSLVFWDANSGHMIM  247 (902)
T ss_dssp             TSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred             CCCEEEEEECCCeEEEEECCCCcEEE
Confidence              489999999999999999988765

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.89  E-value=5.8e-22  Score=136.69  Aligned_cols=138  Identities=10%  Similarity=0.119  Sum_probs=103.3

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeecc---CCceEEEEe--cCcEE------------EEEecCCeEEEE
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAH---HQPITVLEC--VSNRV------------ITGSQDHTLKVY   69 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~--~~~~l------------~~~~~d~~v~v~   69 (166)
                      +..+++|+.|+.+++|+....+       .+.++.+|   ...+.+++|  ++.++            ++|+.|+++++|
T Consensus       193 ~~~LaSgS~D~TIkIWDl~TGk-------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklW  265 (356)
T 2w18_A          193 QEALLGTTIMNNIVIWNLKTGQ-------LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVI  265 (356)
T ss_dssp             TTEEEEEETTSEEEEEETTTCC-------EEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEE
T ss_pred             CceEEEecCCCcEEEEECCCCc-------EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEE
Confidence            3678999999999999986543       23344443   235666677  56554            678899999999


Q ss_pred             Ecccccceehh-----cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEE-EEEEcCC--eEEE
Q psy16373         70 KLEDQQLLFTL-----HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIH-ALTYSDS--YVIS  141 (166)
Q Consensus        70 ~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~-~i~~~~~--~l~~  141 (166)
                      |..+++.+..+     .+|.....+..++  +..+++++.|++|++||+++++.+.++.+|...+. .++|+|+  +|++
T Consensus       266 d~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaS  343 (356)
T 2w18_A          266 NPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLA  343 (356)
T ss_dssp             ETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEE
T ss_pred             ECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEE
Confidence            99999876544     3566554444443  77899999999999999999999999998887655 5899994  8999


Q ss_pred             eecCCcEEEEEC
Q psy16373        142 LGQDERLCVWDR  153 (166)
Q Consensus       142 ~~~d~~i~~wd~  153 (166)
                      |+.|++|++||+
T Consensus       344 GS~D~TIklWd~  355 (356)
T 2w18_A          344 GQKDGNIFVYHY  355 (356)
T ss_dssp             ECTTSCEEEEEE
T ss_pred             EECCCcEEEecC
Confidence            999999999995

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.89  E-value=9.6e-22  Score=136.21  Aligned_cols=147  Identities=13%  Similarity=0.064  Sum_probs=124.7

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCc-EEEEEecCCeEEEEEc-ccccceehh
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSN-RVITGSQDHTLKVYKL-EDQQLLFTL   80 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~-~l~~~~~d~~v~v~~~-~~~~~~~~~   80 (166)
                      ..+..+++++.++.+++|+.......    .....+.+|...|.+++|  +++ +|++++.|+.|++||+ .+++. ..+
T Consensus        21 ~~~~~l~~~~~d~~v~iw~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~   95 (342)
T 1yfq_A           21 PSKSLLLITSWDGSLTVYKFDIQAKN----VDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QAL   95 (342)
T ss_dssp             GGGTEEEEEETTSEEEEEEEETTTTE----EEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EEC
T ss_pred             CCCCEEEEEcCCCeEEEEEeCCCCcc----ccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-Eec
Confidence            34567899999999999998654311    122344589999999999  788 9999999999999999 76654 667


Q ss_pred             cC--CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC---------CeeeEEeecccccEEEEEEcCCeEEEeecCCcEE
Q psy16373         81 HG--HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT---------GACMYSIQAHDGCIHALTYSDSYVISLGQDERLC  149 (166)
Q Consensus        81 ~~--~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~---------~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~  149 (166)
                      .+  |...|.+++|+| +..+++++.|+.+++||+++         ++++..+. |...|.+++|+++.+++++.|+.|+
T Consensus        96 ~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~  173 (342)
T 1yfq_A           96 TNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQ  173 (342)
T ss_dssp             BSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEE
T ss_pred             cccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEE
Confidence            78  999999999999 99999999999999999988         77777666 8889999999998899999999999


Q ss_pred             EEECCc-ccc
Q psy16373        150 VWDRFQ-GHL  158 (166)
Q Consensus       150 ~wd~~~-~~~  158 (166)
                      +||+++ +..
T Consensus       174 i~d~~~~~~~  183 (342)
T 1yfq_A          174 WFRLPLCEDD  183 (342)
T ss_dssp             EEESSCCTTC
T ss_pred             EEECCccccc
Confidence            999988 553

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.89  E-value=3e-21  Score=133.13  Aligned_cols=143  Identities=12%  Similarity=0.135  Sum_probs=109.4

Q ss_pred             CCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-----cCcEEEEEecCCeEEEEEcccccceehhcCCC---Cc
Q psy16373         15 AGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-----VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC---GP   86 (166)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~---~~   86 (166)
                      .++.+++|......      ..+..+.+|...+..++|     ++..|++++.|++|++||+++++.++++.+|.   ..
T Consensus       155 ~d~~V~~~~~s~dG------~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~  228 (356)
T 2w18_A          155 SDQQVEVMTFAEDG------GGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQAS  228 (356)
T ss_dssp             TTCEEEEEEECTTS------CEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CC
T ss_pred             CCCcEEEEEECCCC------ceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceee
Confidence            47778888774432      122344566666655555     45899999999999999999999999998654   35


Q ss_pred             eEEEEEcCCCCEE------------EEecCCCcEEEEeCcCCeeeEEe-----ecccccEEEEEEcCCeEEEeecCCcEE
Q psy16373         87 ITTLFIDGVSMMS------------GSGSQDGLLCVWDTVTGACMYSI-----QAHDGCIHALTYSDSYVISLGQDERLC  149 (166)
Q Consensus        87 v~~~~~~~~~~~~------------~~~~~d~~v~~~d~~~~~~~~~~-----~~~~~~v~~i~~~~~~l~~~~~d~~i~  149 (166)
                      +.+++|+|++..+            ++|+.|+++++||..+++.+..+     .+|.....+..++...+++++.|++|+
T Consensus       229 v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIk  308 (356)
T 2w18_A          229 VCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIA  308 (356)
T ss_dssp             CEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEE
T ss_pred             eEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEE
Confidence            7788999999876            56788999999999999887765     356655656666667899999999999


Q ss_pred             EEECCcccceeeee
Q psy16373        150 VWDRFQGHLLSTIQ  163 (166)
Q Consensus       150 ~wd~~~~~~~~~~~  163 (166)
                      +||+.+++.+.+++
T Consensus       309 IWDl~tGk~l~tL~  322 (356)
T 2w18_A          309 IWDLLLGQCTALLP  322 (356)
T ss_dssp             EEETTTCSEEEEEC
T ss_pred             EEECCCCcEEEEec
Confidence            99999999998876

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.89  E-value=2.3e-21  Score=147.85  Aligned_cols=155  Identities=16%  Similarity=0.207  Sum_probs=133.8

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      +..+..+++++.++.+++|+.....      .....+.+|..+|.+++|   +++.+++++.|+.|++||+.+++....+
T Consensus       106 s~~~~~l~~~~~dg~i~vw~~~~~~------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~  179 (814)
T 3mkq_A          106 HPTKPYVLSGSDDLTVKLWNWENNW------ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL  179 (814)
T ss_dssp             CSSSSEEEEEETTSEEEEEEGGGTS------EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEE
T ss_pred             eCCCCEEEEEcCCCEEEEEECCCCc------eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEE
Confidence            3455678999999999999986542      233456789999999999   3568999999999999999988777776


Q ss_pred             cCCC-CceEEEEEcC--CCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373         81 HGHC-GPITTLFIDG--VSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        81 ~~~~-~~v~~~~~~~--~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~  155 (166)
                      ..+. ..+.+++|+|  ++..+++++.||.+++||+++++.+..+.+|...|.+++|+|  +.+++++.|+.|++||+.+
T Consensus       180 ~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~  259 (814)
T 3mkq_A          180 TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST  259 (814)
T ss_dssp             ECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred             ecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence            6554 8899999999  899999999999999999999999999999999999999999  4899999999999999999


Q ss_pred             ccceeeeee
Q psy16373        156 GHLLSTIQL  164 (166)
Q Consensus       156 ~~~~~~~~~  164 (166)
                      ++.+..+..
T Consensus       260 ~~~~~~~~~  268 (814)
T 3mkq_A          260 YKVEKTLNV  268 (814)
T ss_dssp             CSEEEEECC
T ss_pred             CcEEEEeec
Confidence            888776653

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.89  E-value=2.1e-21  Score=137.77  Aligned_cols=109  Identities=14%  Similarity=0.118  Sum_probs=94.4

Q ss_pred             cCcEEEEEecCCeEEEEEcccccc-----eehhcCCCCceEEEEEcC--------CCCEEEEecCCCcEEEEeCcCCeee
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQL-----LFTLHGHCGPITTLFIDG--------VSMMSGSGSQDGLLCVWDTVTGACM  119 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~-----~~~~~~~~~~v~~~~~~~--------~~~~~~~~~~d~~v~~~d~~~~~~~  119 (166)
                      .+.+|++++.|++|++||.++++.     +..+.+|.+.|.+++|+|        +++++++++.|++|++||++++.++
T Consensus       100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~  179 (393)
T 4gq1_A          100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI  179 (393)
T ss_dssp             EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred             CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence            445799999999999999987643     456789999999999987        6889999999999999999999888


Q ss_pred             EEeecccccEEEEEEcCC---eEEEeecCCcEEEEECCcccceee
Q psy16373        120 YSIQAHDGCIHALTYSDS---YVISLGQDERLCVWDRFQGHLLST  161 (166)
Q Consensus       120 ~~~~~~~~~v~~i~~~~~---~l~~~~~d~~i~~wd~~~~~~~~~  161 (166)
                      ..+..|..++.+++|+|+   +|++++.|+.|++||+++++....
T Consensus       180 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~  224 (393)
T 4gq1_A          180 LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEE  224 (393)
T ss_dssp             EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----
T ss_pred             eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCccccc
Confidence            888889999999999983   799999999999999998876543

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.89  E-value=7.3e-21  Score=136.95  Aligned_cols=155  Identities=14%  Similarity=0.126  Sum_probs=125.3

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c---CcEEEEEecCCeEEEEEcccccceeh
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V---SNRVITGSQDHTLKVYKLEDQQLLFT   79 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~---~~~l~~~~~d~~v~v~~~~~~~~~~~   79 (166)
                      +.+..+++|+.++.+..|+........   .....+.+|...|.+++|  +   +.+|++++.|+.|++||+.+++.+..
T Consensus       159 p~~~~l~~~~~~g~v~~~~~~~~~~~~---~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~  235 (450)
T 2vdu_B          159 EDDTTVIIADKFGDVYSIDINSIPEEK---FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDK  235 (450)
T ss_dssp             TTSSEEEEEETTSEEEEEETTSCCCSS---CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEE
T ss_pred             CCCCEEEEEeCCCcEEEEecCCccccc---ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeee
Confidence            345678888889988888875433111   023356789999999999  5   67999999999999999999888776


Q ss_pred             -hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc-------------------------cccEEEEE
Q psy16373         80 -LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH-------------------------DGCIHALT  133 (166)
Q Consensus        80 -~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~-------------------------~~~v~~i~  133 (166)
                       +.+|...|.+++|+ ++.++++++.|+.|++||+++++.+..+..+                         ...|..++
T Consensus       236 ~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~  314 (450)
T 2vdu_B          236 WLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII  314 (450)
T ss_dssp             ECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred             eecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence             56899999999999 9999999999999999999999988877632                         34688999


Q ss_pred             EcC--CeEEEee-cCCcEEEEEC--Ccc---cceeeee
Q psy16373        134 YSD--SYVISLG-QDERLCVWDR--FQG---HLLSTIQ  163 (166)
Q Consensus       134 ~~~--~~l~~~~-~d~~i~~wd~--~~~---~~~~~~~  163 (166)
                      |+|  .++++++ .|+.|++|++  .++   +.+..+.
T Consensus       315 ~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~  352 (450)
T 2vdu_B          315 KSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIIT  352 (450)
T ss_dssp             ECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEE
T ss_pred             EeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEec
Confidence            998  4888888 8999999999  555   4444444

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.88  E-value=2.1e-21  Score=147.77  Aligned_cols=146  Identities=14%  Similarity=0.223  Sum_probs=125.2

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c--CcEEEEEecCCeEEEEEccccc--ceehh
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V--SNRVITGSQDHTLKVYKLEDQQ--LLFTL   80 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~--~~~l~~~~~d~~v~v~~~~~~~--~~~~~   80 (166)
                      +..+++|+.|+.+++|+.....     ......+.+|..+|.+++|  +  ++.+++|+.|+.|++||+.++.  ....+
T Consensus        67 ~~~l~s~s~Dg~I~vwd~~~~~-----~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~  141 (753)
T 3jro_A           67 GTILASCSYDGKVLIWKEENGR-----WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII  141 (753)
T ss_dssp             CSEEEEEETTSCEEEEEEETTE-----EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEE
T ss_pred             CCEEEEEeCCCeEEEEECCCCc-----ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEe
Confidence            6789999999999999976532     2244456789999999999  4  7899999999999999998873  34456


Q ss_pred             cCCCCceEEEEEcC-------------CCCEEEEecCCCcEEEEeCcCC----eeeEEeecccccEEEEEEcCC-----e
Q psy16373         81 HGHCGPITTLFIDG-------------VSMMSGSGSQDGLLCVWDTVTG----ACMYSIQAHDGCIHALTYSDS-----Y  138 (166)
Q Consensus        81 ~~~~~~v~~~~~~~-------------~~~~~~~~~~d~~v~~~d~~~~----~~~~~~~~~~~~v~~i~~~~~-----~  138 (166)
                      .+|...|.+++|+|             ++..+++++.||.|++||++++    .....+.+|..+|++++|+|+     .
T Consensus       142 ~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~  221 (753)
T 3jro_A          142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY  221 (753)
T ss_dssp             ECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred             ecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCE
Confidence            68999999999999             4899999999999999999877    556678889999999999975     7


Q ss_pred             EEEeecCCcEEEEECCccc
Q psy16373        139 VISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       139 l~~~~~d~~i~~wd~~~~~  157 (166)
                      +++++.|+.|++||+++++
T Consensus       222 l~s~s~Dg~I~iwd~~~~~  240 (753)
T 3jro_A          222 LASVSQDRTCIIWTQDNEQ  240 (753)
T ss_dssp             EEEEESSSCEEEEEESSSS
T ss_pred             EEEEecCCEEEEecCCCCC
Confidence            9999999999999998864

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.88  E-value=2.6e-21  Score=135.54  Aligned_cols=146  Identities=16%  Similarity=0.130  Sum_probs=113.7

Q ss_pred             cCCCceEEEeeccccccee--------eceee-eeeeeccCCceEEEEe--cCcEEEEEecCCe-EEEEEcccccceehh
Q psy16373         13 GSAGSLLDFKKMQVEEEMT--------LTCCK-VESTRAHHQPITVLEC--VSNRVITGSQDHT-LKVYKLEDQQLLFTL   80 (166)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~-v~v~~~~~~~~~~~~   80 (166)
                      |+.++.+++|+........        ....+ ...+.+|..+|.+++|  ++.+|++|+.|++ |++||+++++.+..+
T Consensus       155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~  234 (355)
T 3vu4_A          155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREF  234 (355)
T ss_dssp             SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred             CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence            7899999999986532110        00112 5567899999999999  8899999999998 999999999999998


Q ss_pred             c-C-CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee--eEEee---------------------cccccEEEEEEc
Q psy16373         81 H-G-HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC--MYSIQ---------------------AHDGCIHALTYS  135 (166)
Q Consensus        81 ~-~-~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~--~~~~~---------------------~~~~~v~~i~~~  135 (166)
                      . + |...|.+++|+|++.++++++.|+++++||++....  ...+.                     ....+...++|+
T Consensus       235 ~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  314 (355)
T 3vu4_A          235 RRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWI  314 (355)
T ss_dssp             ECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEES
T ss_pred             EcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEe
Confidence            8 5 999999999999999999999999999999975531  11110                     011233668999


Q ss_pred             CC--eEEEeecCCcEEEEECCcccc
Q psy16373        136 DS--YVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus       136 ~~--~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      ++  .+++++.||.+++|++..++.
T Consensus       315 ~d~~~l~~~~~dg~~~~~~~~~~~~  339 (355)
T 3vu4_A          315 SESSLVVVWPHTRMIETFKVVFDDE  339 (355)
T ss_dssp             SSSEEEEEETTTTEEEEEEEEEETT
T ss_pred             CCCCEEEEEeCCCeEEEEEEEcCCC
Confidence            83  899999999999999877654

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.88  E-value=3.8e-21  Score=133.21  Aligned_cols=157  Identities=13%  Similarity=0.151  Sum_probs=125.8

Q ss_pred             eEEEEecCCCceEEEeeccccccee--eceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEccc-ccc--eehhc
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMT--LTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLED-QQL--LFTLH   81 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~-~~~--~~~~~   81 (166)
                      +..+++++.++.+++|+........  ........+. |...|.+++|.++.+++++.|+.|++||+++ +..  .....
T Consensus       112 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  190 (342)
T 1yfq_A          112 DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEES  190 (342)
T ss_dssp             TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEEC
T ss_pred             CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeec
Confidence            5678899999999999986411100  0011222333 7889999999666699999999999999998 542  23344


Q ss_pred             CCCCceEEEEEcC-CCCEEEEecCCCcEEEEeCcCC------eeeEEeecccc---------cEEEEEEcC--CeEEEee
Q psy16373         82 GHCGPITTLFIDG-VSMMSGSGSQDGLLCVWDTVTG------ACMYSIQAHDG---------CIHALTYSD--SYVISLG  143 (166)
Q Consensus        82 ~~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~------~~~~~~~~~~~---------~v~~i~~~~--~~l~~~~  143 (166)
                      .|...+.+++|+| ++..+++++.||.+++|+++..      +....+..|..         .|.+++|+|  .+|++++
T Consensus       191 ~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  270 (342)
T 1yfq_A          191 GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG  270 (342)
T ss_dssp             SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE
T ss_pred             CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEec
Confidence            6788999999999 9999999999999999999876      77788887765         999999998  5899999


Q ss_pred             cCCcEEEEECCcccceeeeee
Q psy16373        144 QDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       144 ~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .|+.|++||+++++.+..+..
T Consensus       271 ~dg~i~vwd~~~~~~~~~~~~  291 (342)
T 1yfq_A          271 SDGIISCWNLQTRKKIKNFAK  291 (342)
T ss_dssp             TTSCEEEEETTTTEEEEECCC
T ss_pred             CCceEEEEcCccHhHhhhhhc
Confidence            999999999999998877654

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.88  E-value=2e-21  Score=141.68  Aligned_cols=142  Identities=11%  Similarity=0.036  Sum_probs=116.5

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCC-----ceEEEEe--cCcEEEEEecCCeEEEEEcccccc
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQ-----PITVLEC--VSNRVITGSQDHTLKVYKLEDQQL   76 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~   76 (166)
                      ++.+..+++++.++.+++|+.+.         ....+. |..     .+.+++|  ++++|++|+.||.|++||+.++..
T Consensus        94 SPdG~~LAs~s~dg~V~iwd~~~---------~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l  163 (588)
T 2j04_A           94 SPIDDWMAVLSNNGNVSVFKDNK---------MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSE  163 (588)
T ss_dssp             CSSSSCEEEEETTSCEEEEETTE---------EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTT
T ss_pred             CCCCCEEEEEeCCCcEEEEeCCc---------eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcc
Confidence            56778899999999999998432         222334 444     5999999  999999999999999999998753


Q ss_pred             -------eehh----cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee---eEEe-ecccccEEEEEEcCCeEEE
Q psy16373         77 -------LFTL----HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC---MYSI-QAHDGCIHALTYSDSYVIS  141 (166)
Q Consensus        77 -------~~~~----~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~---~~~~-~~~~~~v~~i~~~~~~l~~  141 (166)
                             +..+    .+|...|.+++|+|++  +++++.|+++++||+..+..   ...+ .+|...|.+++|+...+++
T Consensus       164 ~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~LAS  241 (588)
T 2j04_A          164 NTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKVVL  241 (588)
T ss_dssp             TCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEEEE
T ss_pred             ccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEECCEEEE
Confidence                   4555    5678899999999999  78888999999999987763   3456 3788899999999667887


Q ss_pred             eecCCcEEEEECCcccc
Q psy16373        142 LGQDERLCVWDRFQGHL  158 (166)
Q Consensus       142 ~~~d~~i~~wd~~~~~~  158 (166)
                      ++ ++.|++||+.+++.
T Consensus       242 a~-~~tIkLWd~~~~~~  257 (588)
T 2j04_A          242 TC-PGYVHKIDLKNYSI  257 (588)
T ss_dssp             EC-SSEEEEEETTTTEE
T ss_pred             Ee-CCeEEEEECCCCeE
Confidence            76 79999999987766

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.88  E-value=2.7e-20  Score=132.95  Aligned_cols=154  Identities=18%  Similarity=0.310  Sum_probs=131.0

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccc-cceehhcC
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQ-QLLFTLHG   82 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~-~~~~~~~~   82 (166)
                      +..+.++++|+.|+.+++|+.....       .+..+.+|...+.++++++..|++|+.|+.+++||.... ..+..+.+
T Consensus       156 spdg~~lasgs~Dg~v~iWd~~~~~-------~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~  228 (420)
T 4gga_A          156 IKEGNYLAVGTSSAEVQLWDVQQQK-------RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSG  228 (420)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEEC
T ss_pred             CCCCCEEEEEECCCeEEEEEcCCCc-------EEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecc
Confidence            4456789999999999999986543       345677999999999999999999999999999999864 45567788


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe----eeEEeecccccEEEEEEcC---CeEEE--eecCCcEEEEEC
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA----CMYSIQAHDGCIHALTYSD---SYVIS--LGQDERLCVWDR  153 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~----~~~~~~~~~~~v~~i~~~~---~~l~~--~~~d~~i~~wd~  153 (166)
                      |...+..+.++|++..+++++.|+.+++|+..+++    .+.....|...|.+++|+|   ..+++  ++.|+.|++||+
T Consensus       229 h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~  308 (420)
T 4gga_A          229 HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV  308 (420)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEET
T ss_pred             cccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeC
Confidence            99999999999999999999999999999998764    3556677889999999998   35555  457999999999


Q ss_pred             Ccccceeeeee
Q psy16373        154 FQGHLLSTIQL  164 (166)
Q Consensus       154 ~~~~~~~~~~~  164 (166)
                      ++++++..+..
T Consensus       309 ~t~~~~~~~~~  319 (420)
T 4gga_A          309 CSGACLSAVDA  319 (420)
T ss_dssp             TTTEEEEEEEC
T ss_pred             Cccccceeecc
Confidence            99998877664

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.88  E-value=2.8e-21  Score=138.77  Aligned_cols=120  Identities=10%  Similarity=0.054  Sum_probs=102.2

Q ss_pred             ccCCceEEEEe--cCcEEE----EEecCCeEEEEEcccc--------cc---eehhcCCCCceEEEEEcCC-CCEEEEec
Q psy16373         42 AHHQPITVLEC--VSNRVI----TGSQDHTLKVYKLEDQ--------QL---LFTLHGHCGPITTLFIDGV-SMMSGSGS  103 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~----~~~~d~~v~v~~~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~~~~~~  103 (166)
                      .+...|.+++|  ++++|+    +++.|+.|++||+.+.        +.   ...+.+|...|.+++|+|+ +.++++++
T Consensus        90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s  169 (434)
T 2oit_A           90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL  169 (434)
T ss_dssp             CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred             cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence            45678999999  788888    7888999999999765        11   3455678999999999998 88999999


Q ss_pred             CCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeee
Q psy16373        104 QDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       104 ~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      .||+|++||++++..+....+|...|.+++|+|  .+|++++.|+.|++||++ ++....+
T Consensus       170 ~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~  229 (434)
T 2oit_A          170 ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVI  229 (434)
T ss_dssp             TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEE
T ss_pred             CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccccccc
Confidence            999999999999877777777899999999998  599999999999999998 4444433

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.88  E-value=5.7e-21  Score=151.45  Aligned_cols=126  Identities=19%  Similarity=0.279  Sum_probs=118.2

Q ss_pred             eeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC
Q psy16373         38 ESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT  115 (166)
Q Consensus        38 ~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~  115 (166)
                      ..+.+|...|++++|  ++.++++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++.++++++.|+.|++||+.+
T Consensus       609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~  688 (1249)
T 3sfz_A          609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT  688 (1249)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred             EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC
Confidence            356789999999999  889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeeeEEeecccccEEEEEEcC--C--eEEEeecCCcEEEEECCcccceeeee
Q psy16373        116 GACMYSIQAHDGCIHALTYSD--S--YVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       116 ~~~~~~~~~~~~~v~~i~~~~--~--~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      ++.+..+.+|...|.+++|+|  +  .+++++.|+.|++||+++++.+..+.
T Consensus       689 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~  740 (1249)
T 3sfz_A          689 GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF  740 (1249)
T ss_dssp             CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC
T ss_pred             CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec
Confidence            999999999999999999987  2  78999999999999999998877664

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.88  E-value=1.6e-20  Score=132.63  Aligned_cols=151  Identities=16%  Similarity=0.251  Sum_probs=124.7

Q ss_pred             ceEEEEecCCCceEEEeecccccceeece-eee-----eeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccc
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTC-CKV-----ESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQL   76 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~   76 (166)
                      .+..+++|+.++.+++|+........... ...     ....+|..+|.+++|   ++.+|++++.|+.|++||+.+++.
T Consensus        55 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~  134 (408)
T 4a11_B           55 EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT  134 (408)
T ss_dssp             TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE
T ss_pred             CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc
Confidence            56789999999999999987544222111 110     011358999999999   456899999999999999999888


Q ss_pred             eehhcCCCCceEEEEEcCC---CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC---eEEEeecCCcEEE
Q psy16373         77 LFTLHGHCGPITTLFIDGV---SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS---YVISLGQDERLCV  150 (166)
Q Consensus        77 ~~~~~~~~~~v~~~~~~~~---~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~---~l~~~~~d~~i~~  150 (166)
                      ...+. +...+.++.+.|.   +..+++++.|+.+++||+++++.+..+..|...|.+++|+|+   .+++++.|+.|++
T Consensus       135 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i  213 (408)
T 4a11_B          135 ADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKL  213 (408)
T ss_dssp             EEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred             ceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEE
Confidence            77766 7788999999885   459999999999999999999999999999999999999983   5889999999999


Q ss_pred             EECCccc
Q psy16373        151 WDRFQGH  157 (166)
Q Consensus       151 wd~~~~~  157 (166)
                      ||++++.
T Consensus       214 ~d~~~~~  220 (408)
T 4a11_B          214 WDVRRAS  220 (408)
T ss_dssp             EETTCSS
T ss_pred             EECCCCC
Confidence            9998765

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.87  E-value=8.5e-21  Score=138.36  Aligned_cols=150  Identities=9%  Similarity=0.067  Sum_probs=116.0

Q ss_pred             ccceEEEEecCCCceEEEeeccccccee--------e-------------c-eeeeeeee-ccCCceEEEEe--cCcEEE
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMT--------L-------------T-CCKVESTR-AHHQPITVLEC--VSNRVI   58 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-------------~-~~~~~~~~-~~~~~i~~~~~--~~~~l~   58 (166)
                      +..+..+|+++.|+.++  +........        .             . ......+. .|...|.+++|  +|..|+
T Consensus        24 SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LA  101 (588)
T 2j04_A           24 ARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMA  101 (588)
T ss_dssp             CTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEE
T ss_pred             CCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEE
Confidence            56788999999999996  222111000        0             0 00001122 45788999999  899999


Q ss_pred             EEecCCeEEEEEcccccceehhcCCCC-----ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe-------eeEEe----
Q psy16373         59 TGSQDHTLKVYKLEDQQLLFTLHGHCG-----PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA-------CMYSI----  122 (166)
Q Consensus        59 ~~~~d~~v~v~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~-------~~~~~----  122 (166)
                      +++.||.|++||.+.  .+..+. |..     .+.+++|+|+|+++++|+.||+|++||+++++       .+..+    
T Consensus       102 s~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~  178 (588)
T 2j04_A          102 VLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSD  178 (588)
T ss_dssp             EEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSC
T ss_pred             EEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccc
Confidence            999999999999654  555556 655     49999999999999999999999999999875       35666    


Q ss_pred             ecccccEEEEEEcCCeEEEeecCCcEEEEECCcccc
Q psy16373        123 QAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus       123 ~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      .+|...|.+++|+|+.+++++.|+.+++||+..+..
T Consensus       179 ~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~  214 (588)
T 2j04_A          179 AGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSH  214 (588)
T ss_dssp             TTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSS
T ss_pred             ccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCcc
Confidence            567789999999996699999999999999987773

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.87  E-value=3.5e-20  Score=130.34  Aligned_cols=144  Identities=7%  Similarity=-0.018  Sum_probs=114.7

Q ss_pred             EEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccccee--hhcCCCC
Q psy16373         10 LRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF--TLHGHCG   85 (166)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~--~~~~~~~   85 (166)
                      +++++.|+.+++|+.....       ....+ .|...|.+++|  ++.++++++.+ .+.+|+..+++.+.  ....|..
T Consensus       150 ~as~~~d~~i~iwd~~~~~-------~~~~~-~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~  220 (365)
T 4h5i_A          150 IASSKVPAIMRIIDPSDLT-------EKFEI-ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNW  220 (365)
T ss_dssp             EEESCSSCEEEEEETTTTE-------EEEEE-ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTE
T ss_pred             EEECCCCCEEEEeECCCCc-------EEEEe-CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCC
Confidence            4577789999999986543       12233 46778999999  78889888754 56677776665543  3456888


Q ss_pred             ceEEEEEcCCCCEEEEecCCC----cEEEEeCcCCee----eEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373         86 PITTLFIDGVSMMSGSGSQDG----LLCVWDTVTGAC----MYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~~d~----~v~~~d~~~~~~----~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~  155 (166)
                      .|.+++|+|++..+++++.|+    .++.|++.....    ...+.+|..+|++++|+|  .+|++|+.|+.|++||+++
T Consensus       221 ~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~  300 (365)
T 4h5i_A          221 SLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD  300 (365)
T ss_dssp             EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred             CEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC
Confidence            999999999999999998887    688899876643    345678889999999999  4899999999999999999


Q ss_pred             ccceeee
Q psy16373        156 GHLLSTI  162 (166)
Q Consensus       156 ~~~~~~~  162 (166)
                      ++++.++
T Consensus       301 ~~~~~~~  307 (365)
T 4h5i_A          301 LSMSKIF  307 (365)
T ss_dssp             TEEEEEE
T ss_pred             CcEEEEe
Confidence            9988765

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.86  E-value=9.3e-20  Score=124.98  Aligned_cols=143  Identities=15%  Similarity=0.222  Sum_probs=119.7

Q ss_pred             EEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCc
Q psy16373          9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP   86 (166)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~   86 (166)
                      .|++| .|+.|++|+....+     ......+.+|...|.+++|  ++++|++|+.|+.|++||+++++.+..+.+|...
T Consensus        38 ~lAvg-~D~tV~iWd~~tg~-----~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~  111 (318)
T 4ggc_A           38 VLAVA-LDNSVYLWSASSGD-----ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSAR  111 (318)
T ss_dssp             EEEEE-ETTEEEEEETTTCC-----EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred             EEEEE-eCCEEEEEECCCCC-----EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccce
Confidence            45555 47889999976543     1222344578889999999  8899999999999999999999999999999998


Q ss_pred             eEEEEEcCCCCEEEEecCCCcEEEEeCcCC-eeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373         87 ITTLFIDGVSMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        87 v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      +.++...  +..+++++.++.+++|+.... ..+..+.+|...+..+.+.+  ..+++++.|+.|++||+++++..
T Consensus       112 ~~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~  185 (318)
T 4ggc_A          112 VGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG  185 (318)
T ss_dssp             EEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB
T ss_pred             EEEeecC--CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccc
Confidence            8877664  578999999999999998865 56677888999999999987  58999999999999999987643

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.85  E-value=1.2e-20  Score=135.30  Aligned_cols=151  Identities=14%  Similarity=0.153  Sum_probs=116.5

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c-CcEEEEEecCCeEEEEEcccccceehh-
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V-SNRVITGSQDHTLKVYKLEDQQLLFTL-   80 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~-~~~l~~~~~d~~v~v~~~~~~~~~~~~-   80 (166)
                      ..+.++++|+.++.+++|+....        .+..+.+|...|.+++|  + ..++++|+.|+.|++||+++.+....+ 
T Consensus       219 ~~~~~l~~g~~dg~i~~wd~~~~--------~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~  290 (435)
T 4e54_B          219 ASSRMVVTGDNVGNVILLNMDGK--------ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFL  290 (435)
T ss_dssp             TTTTEEEEECSSSBEEEEESSSC--------BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCS
T ss_pred             CCCCEEEEEeCCCcEeeeccCcc--------eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEE
Confidence            34568999999999999997532        23456789999999999  3 347889999999999999887654333 


Q ss_pred             --cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccc------cEEEEEEcC--CeEEEee-------
Q psy16373         81 --HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDG------CIHALTYSD--SYVISLG-------  143 (166)
Q Consensus        81 --~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~------~v~~i~~~~--~~l~~~~-------  143 (166)
                        .+|...|++++|+|++.++++++.|+.|++||++++.....+..|..      .+....|++  +.++++.       
T Consensus       291 ~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  370 (435)
T 4e54_B          291 YSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFK  370 (435)
T ss_dssp             BCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSC
T ss_pred             EeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeE
Confidence              56899999999999999999999999999999999887777655432      122344554  2333332       


Q ss_pred             -----cCCcEEEEECCcccceeeee
Q psy16373        144 -----QDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       144 -----~d~~i~~wd~~~~~~~~~~~  163 (166)
                           .++.|++||..+++.+.++.
T Consensus       371 ~~~~~~~~~i~iwd~~~g~~~~~l~  395 (435)
T 4e54_B          371 SCTPYELRTIDVFDGNSGKMMCQLY  395 (435)
T ss_dssp             CSSTTCCCCEEEECSSSCCEEEEEC
T ss_pred             EEEecCCCEEEEEECCCCcEEEEEe
Confidence                 34679999999998877653

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.84  E-value=2e-19  Score=129.21  Aligned_cols=150  Identities=9%  Similarity=0.033  Sum_probs=113.3

Q ss_pred             ceEEEE----ecCCCceEEEeecccccce----eeceeeeeeeeccCCceEEEEe--c-CcEEEEEecCCeEEEEEcccc
Q psy16373          6 HRIHLR----TGSAGSLLDFKKMQVEEEM----TLTCCKVESTRAHHQPITVLEC--V-SNRVITGSQDHTLKVYKLEDQ   74 (166)
Q Consensus         6 ~~~~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~--~-~~~l~~~~~d~~v~v~~~~~~   74 (166)
                      .+..++    +|+.|+.+++|+.......    .........+.+|...|.+++|  + +++|++++.|+.|++||++++
T Consensus       103 dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~  182 (434)
T 2oit_A          103 DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET  182 (434)
T ss_dssp             TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS
T ss_pred             CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC
Confidence            345666    8999999999998653100    0011123455689999999999  3 678999999999999999988


Q ss_pred             cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc-------cccEEEEEEcCC-eEE--Eeec
Q psy16373         75 QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH-------DGCIHALTYSDS-YVI--SLGQ  144 (166)
Q Consensus        75 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~-------~~~v~~i~~~~~-~l~--~~~~  144 (166)
                      .......+|...|.+++|+|++.++++|+.||.|++||++ ++....+..|       ...|.++.|+++ .++  ..+.
T Consensus       183 ~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~  261 (434)
T 2oit_A          183 VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAA  261 (434)
T ss_dssp             EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEET
T ss_pred             cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccC
Confidence            7666666788999999999999999999999999999998 5555555433       338899999984 222  2333


Q ss_pred             CC------cEEEEECCcc
Q psy16373        145 DE------RLCVWDRFQG  156 (166)
Q Consensus       145 d~------~i~~wd~~~~  156 (166)
                      ||      .+++|++++.
T Consensus       262 dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          262 DGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             TCCSSSCCEEEEEECCCT
T ss_pred             CCccCCCCceEEEEeccC
Confidence            43      3899999865

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.83  E-value=8e-19  Score=125.28  Aligned_cols=155  Identities=13%  Similarity=0.049  Sum_probs=125.8

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      .+.++++++.++.+.+|+....+..  .......+.+|...|.+++|  ++.++++++.|+.|++||+++++.+..+..|
T Consensus       133 ~~~~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~  210 (433)
T 3bws_A          133 NTRLAIPLLEDEGMDVLDINSGQTV--RLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLT  210 (433)
T ss_dssp             SSEEEEEBTTSSSEEEEETTTCCEE--EECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECS
T ss_pred             CCeEEEEeCCCCeEEEEECCCCeEe--eecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCC
Confidence            5678888888998999987654321  11112234578899999999  7888999999999999999999888888889


Q ss_pred             CCceEEEEEcCCCCEE-EEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEee--------cCCcEEEEE
Q psy16373         84 CGPITTLFIDGVSMMS-GSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLG--------QDERLCVWD  152 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~-~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~--------~d~~i~~wd  152 (166)
                      ...+.+++|+|++..+ ++++.|+.|++||+++++.+..+..+ ..+..++|+|  +.+++++        .|+.|++||
T Consensus       211 ~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d  289 (433)
T 3bws_A          211 GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYS  289 (433)
T ss_dssp             SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEE
T ss_pred             CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEE
Confidence            9999999999998877 55568999999999999988887754 4589999998  3777777        488999999


Q ss_pred             CCcccceeeee
Q psy16373        153 RFQGHLLSTIQ  163 (166)
Q Consensus       153 ~~~~~~~~~~~  163 (166)
                      +++++.+..+.
T Consensus       290 ~~~~~~~~~~~  300 (433)
T 3bws_A          290 MDKEKLIDTIG  300 (433)
T ss_dssp             TTTTEEEEEEE
T ss_pred             CCCCcEEeecc
Confidence            99888776553

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.83  E-value=5.8e-18  Score=119.37  Aligned_cols=148  Identities=8%  Similarity=0.091  Sum_probs=118.8

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEE-EEEecCCeEEEEEcccccceehhcCC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRV-ITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l-~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      ++++++++.++.+++|+....+       ....+..|. .+.+++|  +++.+ ++++.|+.|++||+.+++.+..+..+
T Consensus         2 ~~l~vs~~~d~~v~v~d~~~~~-------~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~   73 (391)
T 1l0q_A            2 TFAYIANSESDNISVIDVTSNK-------VTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG   73 (391)
T ss_dssp             EEEEEEETTTTEEEEEETTTTE-------EEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred             CEEEEEcCCCCEEEEEECCCCe-------EEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC
Confidence            5789999999999999976442       223344454 4789999  67666 67778999999999999888887755


Q ss_pred             CCceEEEEEcCCCCEEE-EecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eE-EEeecCCcEEEEECCcccce
Q psy16373         84 CGPITTLFIDGVSMMSG-SGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YV-ISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~~-~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l-~~~~~d~~i~~wd~~~~~~~  159 (166)
                      . .+.+++|+|+++.++ +++.++.|++||+++++.+..+..+ ..+.+++|+|+  .+ ++++.|+.|++||+++++.+
T Consensus        74 ~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~  151 (391)
T 1l0q_A           74 S-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI  151 (391)
T ss_dssp             S-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred             C-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence            5 899999999998774 5567799999999999988887754 56789999984  55 67778999999999999887


Q ss_pred             eeeee
Q psy16373        160 STIQL  164 (166)
Q Consensus       160 ~~~~~  164 (166)
                      ..+..
T Consensus       152 ~~~~~  156 (391)
T 1l0q_A          152 NTVSV  156 (391)
T ss_dssp             EEEEC
T ss_pred             EEEec
Confidence            76654

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.77  E-value=1.3e-16  Score=113.78  Aligned_cols=150  Identities=9%  Similarity=0.029  Sum_probs=120.1

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEE-EEecCCeEEEEEcccccceehhc
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVI-TGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~-~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      ..+..+++++.++.+.+|+.....       ....+..|...+.+++|  +++.++ +++.|+.|++||+++++.+..+.
T Consensus       179 ~~~~~~~s~~~d~~v~~~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~  251 (433)
T 3bws_A          179 EHNELWVSQMQANAVHVFDLKTLA-------YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD  251 (433)
T ss_dssp             GGTEEEEEEGGGTEEEEEETTTCC-------EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC
T ss_pred             CCCEEEEEECCCCEEEEEECCCce-------EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec
Confidence            356788999999999999975432       23345578889999999  666664 55579999999999988877776


Q ss_pred             CCCCceEEEEEcCCCCEEEEec--------CCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC---eEEEeecCCcEEE
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGS--------QDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS---YVISLGQDERLCV  150 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~--------~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~---~l~~~~~d~~i~~  150 (166)
                      .+ ..+.+++++|++..+++++        .|+.|++||+++++.+..+ .+...+..++|+|+   .+++++.|+.|++
T Consensus       252 ~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v  329 (433)
T 3bws_A          252 KI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEV  329 (433)
T ss_dssp             CC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEE
T ss_pred             CC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEE
Confidence            54 4589999999999988887        5889999999998877665 35668889999983   4566688999999


Q ss_pred             EECCcccceeeee
Q psy16373        151 WDRFQGHLLSTIQ  163 (166)
Q Consensus       151 wd~~~~~~~~~~~  163 (166)
                      ||+.+++.+..+.
T Consensus       330 ~d~~~~~~~~~~~  342 (433)
T 3bws_A          330 YDLKEKKVQKSIP  342 (433)
T ss_dssp             EETTTTEEEEEEE
T ss_pred             EECCCCcEEEEec
Confidence            9999988877665

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.77  E-value=2.8e-16  Score=110.78  Aligned_cols=147  Identities=12%  Similarity=0.088  Sum_probs=114.5

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEE-EEecCCeEEEEEcccccceehhcCCC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVI-TGSQDHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~-~~~~d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      .++++++.++.+.+|+....+       ....+..+. .+.+++|  +++.|+ +++.++.|++||+.+++.+..+..+ 
T Consensus        45 ~l~~~~~~d~~i~v~d~~~~~-------~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-  115 (391)
T 1l0q_A           45 KVYVANAHSNDVSIIDTATNN-------VIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-  115 (391)
T ss_dssp             EEEEEEGGGTEEEEEETTTTE-------EEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-
T ss_pred             EEEEECCCCCeEEEEECCCCe-------EEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-
Confidence            455788888999999875432       222333333 8899999  677665 5556799999999999887777644 


Q ss_pred             CceEEEEEcCCCCEE-EEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eE-EEeecCCcEEEEECCccccee
Q psy16373         85 GPITTLFIDGVSMMS-GSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YV-ISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~-~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l-~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      ..+.+++|+|+++.+ ++++.++.|++||+++++.+..+..+ ..+..++|+|+  .+ ++++.|+.|++||+++++.+.
T Consensus       116 ~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~  194 (391)
T 1l0q_A          116 KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID  194 (391)
T ss_dssp             SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence            568999999999877 78888999999999999988888765 45689999983  55 567788999999999988776


Q ss_pred             eeee
Q psy16373        161 TIQL  164 (166)
Q Consensus       161 ~~~~  164 (166)
                      .+..
T Consensus       195 ~~~~  198 (391)
T 1l0q_A          195 TVKV  198 (391)
T ss_dssp             EEEC
T ss_pred             EEec
Confidence            6643

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.67  E-value=3.2e-14  Score=101.62  Aligned_cols=132  Identities=10%  Similarity=-0.010  Sum_probs=104.1

Q ss_pred             ceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCC---eEEEEEcccccceehhcCCCCceEEEE
Q psy16373         17 SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDH---TLKVYKLEDQQLLFTLHGHCGPITTLF   91 (166)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~---~v~v~~~~~~~~~~~~~~~~~~v~~~~   91 (166)
                      +.+.+|+....        ....+.+|...+.+++|  +++.|++++.++   .|++||+.+++.. .+..|...+.+++
T Consensus       159 ~~i~i~d~~g~--------~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~  229 (415)
T 2hqs_A          159 YELRVSDYDGY--------NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPA  229 (415)
T ss_dssp             EEEEEEETTSC--------SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEE
T ss_pred             ceEEEEcCCCC--------CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEE
Confidence            68888887532        12355678889999999  888999999875   9999999988764 4566888899999


Q ss_pred             EcCCCCEEE-EecCCCc--EEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEeec-CC--cEEEEECCcccc
Q psy16373         92 IDGVSMMSG-SGSQDGL--LCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQ-DE--RLCVWDRFQGHL  158 (166)
Q Consensus        92 ~~~~~~~~~-~~~~d~~--v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~-d~--~i~~wd~~~~~~  158 (166)
                      |+|+++.++ +++.++.  |++||+++++. ..+..|...+..++|+|+  .|++++. ++  .|.+||+.+++.
T Consensus       230 ~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~  303 (415)
T 2hqs_A          230 FSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP  303 (415)
T ss_dssp             ECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC
T ss_pred             EcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE
Confidence            999999887 6666654  99999988775 566778889999999984  6777765 44  688889887764

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.62  E-value=1.8e-13  Score=100.95  Aligned_cols=146  Identities=7%  Similarity=0.042  Sum_probs=116.4

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeee-ccCCceEEEEe--cCcEEEEEecCCeEEEEEc--ccccceeh
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR-AHHQPITVLEC--VSNRVITGSQDHTLKVYKL--EDQQLLFT   79 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~--~~~~~~~~   79 (166)
                      ..+..+++++.++.+.+|+....+       .+.++. ++.  +.++++  ++++|++++.|+.|.+||+  .+++.+.+
T Consensus       147 p~~~~~vs~~~d~~V~v~D~~t~~-------~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~  217 (543)
T 1nir_A          147 LPNLFSVTLRDAGQIALVDGDSKK-------IVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE  217 (543)
T ss_dssp             GGGEEEEEEGGGTEEEEEETTTCC-------EEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred             CCCEEEEEEcCCCeEEEEECCCce-------EEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEE
Confidence            456788999999999999865433       233444 333  778888  8899999999999999999  78888877


Q ss_pred             hcCCCCceEEEEEcC----CCCEEEEecC-CCcEEEEeCcCCeeeEEeecc----------cc-cEEEEEEcCC---eEE
Q psy16373         80 LHGHCGPITTLFIDG----VSMMSGSGSQ-DGLLCVWDTVTGACMYSIQAH----------DG-CIHALTYSDS---YVI  140 (166)
Q Consensus        80 ~~~~~~~v~~~~~~~----~~~~~~~~~~-d~~v~~~d~~~~~~~~~~~~~----------~~-~v~~i~~~~~---~l~  140 (166)
                      +. +...+..++|+|    +++++++++. +++|.+||..+++++..+..+          .. .+..+.++++   +++
T Consensus       218 i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~v  296 (543)
T 1nir_A          218 IK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIV  296 (543)
T ss_dssp             EE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEE
T ss_pred             Ee-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEE
Confidence            77 455679999999    9999988874 899999999999998887642          22 6888999872   677


Q ss_pred             EeecCCcEEEEECCccccee
Q psy16373        141 SLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus       141 ~~~~d~~i~~wd~~~~~~~~  160 (166)
                      +...++.|.+||..+.+.+.
T Consensus       297 s~~~~g~i~vvd~~~~~~l~  316 (543)
T 1nir_A          297 NVKETGKVLLVNYKDIDNLT  316 (543)
T ss_dssp             EETTTTEEEEEECTTSSSCE
T ss_pred             EECCCCeEEEEEecCCCcce
Confidence            77789999999998876554

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.61  E-value=2.1e-13  Score=97.39  Aligned_cols=145  Identities=13%  Similarity=0.014  Sum_probs=106.6

Q ss_pred             ccceEEEEecCCCc---eEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEE-EEecCC--eEEEEEccccc
Q psy16373          4 SVHRIHLRTGSAGS---LLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVI-TGSQDH--TLKVYKLEDQQ   75 (166)
Q Consensus         4 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~-~~~~d~--~v~v~~~~~~~   75 (166)
                      ++.+..++.++.++   .+.+|+......        ..+..|...+.+++|  +++.|+ +++.++  .|.+||+.+++
T Consensus       187 Spdg~~la~~s~~~~~~~i~~~d~~tg~~--------~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~  258 (415)
T 2hqs_A          187 SPDGSKLAYVTFESGRSALVIQTLANGAV--------RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ  258 (415)
T ss_dssp             CTTSSEEEEEECTTSSCEEEEEETTTCCE--------EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred             cCCCCEEEEEEecCCCcEEEEEECCCCcE--------EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC
Confidence            34455667666654   788888754321        134567778999999  777777 666555  49999998876


Q ss_pred             ceehhcCCCCceEEEEEcCCCCEEEEecC-CC--cEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecC---Cc
Q psy16373         76 LLFTLHGHCGPITTLFIDGVSMMSGSGSQ-DG--LLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQD---ER  147 (166)
Q Consensus        76 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~--~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d---~~  147 (166)
                      . ..+..|...+.+++|+|+++.++.++. ++  .+.+||+.+++. ..+..+...+..++|+|  ++|++++.+   ..
T Consensus       259 ~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~  336 (415)
T 2hqs_A          259 I-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQH  336 (415)
T ss_dssp             E-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEE
T ss_pred             E-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceE
Confidence            5 556678889999999999998887775 44  677889887764 34555667888999999  467777654   58


Q ss_pred             EEEEECCcccc
Q psy16373        148 LCVWDRFQGHL  158 (166)
Q Consensus       148 i~~wd~~~~~~  158 (166)
                      |.+||+.+++.
T Consensus       337 i~~~d~~~~~~  347 (415)
T 2hqs_A          337 IAKQDLATGGV  347 (415)
T ss_dssp             EEEEETTTCCE
T ss_pred             EEEEECCCCCE
Confidence            99999988765

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.59  E-value=9.6e-13  Score=91.27  Aligned_cols=150  Identities=13%  Similarity=0.071  Sum_probs=112.2

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccC---------CceEEEEe--cCcEEEEEe--cCCeEEEEEcccc
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHH---------QPITVLEC--VSNRVITGS--QDHTLKVYKLEDQ   74 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~i~~~~~--~~~~l~~~~--~d~~v~v~~~~~~   74 (166)
                      ..++++..++.+.+|+......       ...+..+.         ..+.++.+  +++.++.++  .++.|.+||..++
T Consensus       102 ~l~v~~~~~~~v~~~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~  174 (353)
T 3vgz_A          102 TLWFGNTVNSAVTAIDAKTGEV-------KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI  174 (353)
T ss_dssp             EEEEEETTTTEEEEEETTTCCE-------EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT
T ss_pred             EEEEEecCCCEEEEEeCCCCee-------EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC
Confidence            4666777777888887654331       11222211         12677888  677777665  4789999999999


Q ss_pred             cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec----ccccEEEEEEcC--CeEEEeec-CCc
Q psy16373         75 QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA----HDGCIHALTYSD--SYVISLGQ-DER  147 (166)
Q Consensus        75 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~----~~~~v~~i~~~~--~~l~~~~~-d~~  147 (166)
                      +....+..+...+.+++++|+++.+++++.++.+.+||+.+++.+..+..    +...+..++|+|  +.++.++. ++.
T Consensus       175 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~  254 (353)
T 3vgz_A          175 KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE  254 (353)
T ss_dssp             EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE
T ss_pred             ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE
Confidence            88877775666688999999999999999999999999999988877654    445678899998  35655554 589


Q ss_pred             EEEEECCcccceeeeee
Q psy16373        148 LCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       148 i~~wd~~~~~~~~~~~~  164 (166)
                      |.+||..+++.+..+..
T Consensus       255 v~~~d~~~~~~~~~~~~  271 (353)
T 3vgz_A          255 VLVVDTRNGNILAKVAA  271 (353)
T ss_dssp             EEEEETTTCCEEEEEEC
T ss_pred             EEEEECCCCcEEEEEEc
Confidence            99999999998877764

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.56  E-value=3e-13  Score=93.32  Aligned_cols=147  Identities=12%  Similarity=0.134  Sum_probs=103.8

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecC-CeEEEEEcc--ccc--ce
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQD-HTLKVYKLE--DQQ--LL   77 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d-~~v~v~~~~--~~~--~~   77 (166)
                      .+++.+++++.++.+.+|+.......    ..... ..+...+.+++|  ++++|++++.+ +.|.+|++.  +++  .+
T Consensus         3 ~~~~l~~~~~~~~~v~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~   77 (343)
T 1ri6_A            3 LKQTVYIASPESQQIHVWNLNHEGAL----TLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFA   77 (343)
T ss_dssp             CEEEEEEEEGGGTEEEEEEECTTSCE----EEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred             ceEEEEEeCCCCCeEEEEEECCCCcE----EEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeec
Confidence            45677788788899999987532211    11111 245667888888  78888888876 999999997  443  33


Q ss_pred             ehhcCCCCceEEEEEcCCCCEEEEec-CCCcEEEEeCc---CCeeeEEeecccccEEEEEEcCC--eEEEee-cCCcEEE
Q psy16373         78 FTLHGHCGPITTLFIDGVSMMSGSGS-QDGLLCVWDTV---TGACMYSIQAHDGCIHALTYSDS--YVISLG-QDERLCV  150 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~v~~~d~~---~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~-~d~~i~~  150 (166)
                      ..+..+. .+..++|+|+++.+++++ .++.+.+||+.   ..+.+..+.. ...+..++|+|+  .+++++ .++.|.+
T Consensus        78 ~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~  155 (343)
T 1ri6_A           78 AESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICL  155 (343)
T ss_dssp             EEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEE
T ss_pred             cccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEE
Confidence            4444333 788999999999776554 58899999994   4444555543 345788999983  677776 7999999


Q ss_pred             EECCc-ccc
Q psy16373        151 WDRFQ-GHL  158 (166)
Q Consensus       151 wd~~~-~~~  158 (166)
                      ||+.+ ++.
T Consensus       156 ~d~~~~~~~  164 (343)
T 1ri6_A          156 FTVSDDGHL  164 (343)
T ss_dssp             EEECTTSCE
T ss_pred             EEecCCCce
Confidence            99987 543

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.56  E-value=2e-12  Score=89.12  Aligned_cols=145  Identities=7%  Similarity=-0.025  Sum_probs=106.3

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEec-CCeEEEEEcccccc-eehh
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQ-DHTLKVYKLEDQQL-LFTL   80 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~-d~~v~v~~~~~~~~-~~~~   80 (166)
                      ..+..+++++.++.+.+|+....+.       ...+..+.... ++++  +++++++++. ++.|.+||..+++. ...+
T Consensus         8 ~~~~~~v~~~~~~~v~~~d~~~~~~-------~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~   79 (331)
T 3u4y_A            8 TSNFGIVVEQHLRRISFFSTDTLEI-------LNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI   79 (331)
T ss_dssp             CCCEEEEEEGGGTEEEEEETTTCCE-------EEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE
T ss_pred             CCCEEEEEecCCCeEEEEeCcccce-------eeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec
Confidence            4567788899999999998754431       11222334455 8888  6776666655 89999999999887 6666


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCC---cEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEe-ecCCc-EEEEEC
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDG---LLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISL-GQDER-LCVWDR  153 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~---~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~-~~d~~-i~~wd~  153 (166)
                      ..+..+..+++++|++++++++..++   .+.+||+.+++.+..+..+ .....++|+|+  +++++ ..++. |.+|++
T Consensus        80 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~  158 (331)
T 3u4y_A           80 QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKI  158 (331)
T ss_dssp             EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred             ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence            66666666699999999988665553   8999999999888877653 45589999994  45555 45588 999998


Q ss_pred             Ccccc
Q psy16373        154 FQGHL  158 (166)
Q Consensus       154 ~~~~~  158 (166)
                      .....
T Consensus       159 ~~~g~  163 (331)
T 3u4y_A          159 DADGV  163 (331)
T ss_dssp             CTTCC
T ss_pred             CCCCc
Confidence            75443

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.52  E-value=5.5e-13  Score=98.32  Aligned_cols=110  Identities=7%  Similarity=-0.018  Sum_probs=95.0

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeC--cCCeeeEEeecccccEE
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT--VTGACMYSIQAHDGCIH  130 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~--~~~~~~~~~~~~~~~v~  130 (166)
                      ++..+++++.|++|.+||..+++.+..+..+.. +..++++|+++++++++.|+.|.+||+  .+++.+..+.. ...+.
T Consensus       148 ~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~  225 (543)
T 1nir_A          148 PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEAR  225 (543)
T ss_dssp             GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEE
T ss_pred             CCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcc
Confidence            677888889999999999999999888874333 889999999999999999999999999  88888888874 45678


Q ss_pred             EEEEcC----C--eEEEeec-CCcEEEEECCcccceeeeee
Q psy16373        131 ALTYSD----S--YVISLGQ-DERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       131 ~i~~~~----~--~l~~~~~-d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .++|+|    +  ++++++. ++.|.+||..+++++.++..
T Consensus       226 ~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~  266 (543)
T 1nir_A          226 SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVST  266 (543)
T ss_dssp             EEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEEC
T ss_pred             eEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecc
Confidence            999998    5  7777774 89999999999999888764

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.52  E-value=3.3e-12  Score=88.59  Aligned_cols=142  Identities=14%  Similarity=0.058  Sum_probs=103.5

Q ss_pred             CCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC----CCCce
Q psy16373         14 SAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG----HCGPI   87 (166)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~----~~~~v   87 (166)
                      ..++.+.+|+.....       ....+..+...+.++++  +++.+++++.++.+.+||..+++....+..    +...+
T Consensus       161 ~~~~~i~~~d~~~~~-------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~  233 (353)
T 3vgz_A          161 GKESVIWVVDGGNIK-------LKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFF  233 (353)
T ss_dssp             SSSCEEEEEETTTTE-------EEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCE
T ss_pred             CCCceEEEEcCCCCc-------eEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCccc
Confidence            345666666654322       22233333444667777  788999999999999999999887766653    45567


Q ss_pred             EEEEEcCCCCEEEEec-CCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEee-cCCcEEEEECCcccceeeee
Q psy16373         88 TTLFIDGVSMMSGSGS-QDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLG-QDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus        88 ~~~~~~~~~~~~~~~~-~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~~~~~~~~~~  163 (166)
                      ..++++|+++.++.++ .++.+.+||+.+++.+..+.....  ..++|+|  +.++.++ .++.|.+||..+++.+..+.
T Consensus       234 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~  311 (353)
T 3vgz_A          234 INISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD  311 (353)
T ss_dssp             EEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             ceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEe
Confidence            8899999988665554 458999999999988887765332  4688888  3455555 68999999999998887776


Q ss_pred             e
Q psy16373        164 L  164 (166)
Q Consensus       164 ~  164 (166)
                      .
T Consensus       312 ~  312 (353)
T 3vgz_A          312 T  312 (353)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.52  E-value=1e-12  Score=92.77  Aligned_cols=149  Identities=11%  Similarity=0.038  Sum_probs=106.9

Q ss_pred             ccceEEEEecCCCceEEEeecccccce----eeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceeh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEM----TLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFT   79 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~   79 (166)
                      ++++.++++|+.++++. |+.......    .....+.. ...+.. |..++|+++.|+++ .++.|++||+.+......
T Consensus        46 s~~~gll~a~~~~~l~v-~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv~sl~~~~~  121 (388)
T 1xip_A           46 SNSKSLFVAASGSKAVV-GELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCFHGDQVLVS-TRNALYSLDLEELSEFRT  121 (388)
T ss_dssp             ETTTTEEEEEETTEEEE-EEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEEETTEEEEE-ESSEEEEEESSSTTCEEE
T ss_pred             cCCCCEEEEeCCCEEEE-EEhhHhhhhhccccccccceE-EeeCCC-eeEEEECCCEEEEE-cCCcEEEEEchhhhccCc
Confidence            45566778888887777 554322200    00011111 123555 99999988889988 889999999987665555


Q ss_pred             hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccc-
Q psy16373         80 LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHL-  158 (166)
Q Consensus        80 ~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~-  158 (166)
                      ...|...+.++.+.+.  .+++++.||.+.+||++++....    +...|++++|+|+-++.+..||.+++|+...++. 
T Consensus       122 ~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~~~~  195 (388)
T 1xip_A          122 VTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEME  195 (388)
T ss_dssp             EEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSEEEEEETTSCEEEEEEETTEEE
T ss_pred             cceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCceEEEEcCCcEEEEcCCCcccc
Confidence            5667777888776543  38888999999999999776543    4568999999997788999999999998876664 


Q ss_pred             -eeee
Q psy16373        159 -LSTI  162 (166)
Q Consensus       159 -~~~~  162 (166)
                       ..++
T Consensus       196 ~k~~I  200 (388)
T 1xip_A          196 KQFEF  200 (388)
T ss_dssp             EEEEE
T ss_pred             cccee
Confidence             4444

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.51  E-value=2.8e-12  Score=86.49  Aligned_cols=115  Identities=15%  Similarity=0.085  Sum_probs=88.7

Q ss_pred             ceEEEEe--cCcEEE-EEecCCeEEEEEccc-ccceehhcCCCCceEEEEEcCCCCEEEEec-CCCcEEEEeCc-CCeee
Q psy16373         46 PITVLEC--VSNRVI-TGSQDHTLKVYKLED-QQLLFTLHGHCGPITTLFIDGVSMMSGSGS-QDGLLCVWDTV-TGACM  119 (166)
Q Consensus        46 ~i~~~~~--~~~~l~-~~~~d~~v~v~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~v~~~d~~-~~~~~  119 (166)
                      .+.+++|  +++.|+ +++.++.+.+|++.. ......+..+...+.+++|+|+++.++.++ .++.+.+|++. .+..+
T Consensus       130 ~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~  209 (297)
T 2ojh_A          130 PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSV  209 (297)
T ss_dssp             SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCE
T ss_pred             CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCc
Confidence            4788888  677666 788899999999643 233455566778899999999999877655 58899999886 55666


Q ss_pred             EEeecccccEEEEEEcC--CeEEEeecC-----------CcEEEEECCccccee
Q psy16373        120 YSIQAHDGCIHALTYSD--SYVISLGQD-----------ERLCVWDRFQGHLLS  160 (166)
Q Consensus       120 ~~~~~~~~~v~~i~~~~--~~l~~~~~d-----------~~i~~wd~~~~~~~~  160 (166)
                      ..+..+...+..+.|+|  .+|++++.+           +.|.+||+.+++...
T Consensus       210 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~  263 (297)
T 2ojh_A          210 ERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVET  263 (297)
T ss_dssp             EECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEE
T ss_pred             EEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCcee
Confidence            77777888899999998  467777665           569999998876543

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.48  E-value=5.2e-12  Score=86.88  Aligned_cols=76  Identities=13%  Similarity=0.037  Sum_probs=63.9

Q ss_pred             eEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373         87 ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus        87 v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      +.+++++|++++++++  ++.+.+||+.+++.+..+.. ...+.+++|+|  +.+++++.++.|.+||+.+++.+..+..
T Consensus       243 ~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~  319 (337)
T 1pby_B          243 YFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL  319 (337)
T ss_dssp             EEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred             eeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence            4568999999988887  79999999999988877764 34567899998  4788888899999999999999888875


Q ss_pred             c
Q psy16373        165 Q  165 (166)
Q Consensus       165 ~  165 (166)
                      +
T Consensus       320 ~  320 (337)
T 1pby_B          320 P  320 (337)
T ss_dssp             G
T ss_pred             C
Confidence            4

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.48  E-value=3.1e-12  Score=88.06  Aligned_cols=147  Identities=13%  Similarity=0.008  Sum_probs=106.3

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeee-ccCC-ceEEEEe--cCcEE-EEEecCCeEEEEEcccccceehhcC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR-AHHQ-PITVLEC--VSNRV-ITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~i~~~~~--~~~~l-~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      ..+++++.++.+.+|+....+       ....+. ++.. .+.++++  +++.+ +++..++.|.+||+.+++.+..+..
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~-------~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~   74 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMA-------VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDL   74 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTE-------EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEEC
T ss_pred             cEEEEcCCCCeEEEEECCCCc-------EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEc
Confidence            367888888899998875432       112222 2211 3667778  66555 5556679999999999887766553


Q ss_pred             C-----CCceEEEEEcCCCCEEEEec------------CCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEee
Q psy16373         83 H-----CGPITTLFIDGVSMMSGSGS------------QDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLG  143 (166)
Q Consensus        83 ~-----~~~v~~~~~~~~~~~~~~~~------------~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~  143 (166)
                      .     ...+..++++|+++.++++.            .++.+.+||+.+++.+..+.. ...+..++|+|+  .++++ 
T Consensus        75 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~-  152 (337)
T 1pby_B           75 STPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL-  152 (337)
T ss_dssp             CBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE-
T ss_pred             CCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe-
Confidence            2     12567899999998888875            579999999999888877764 445778899983  56666 


Q ss_pred             cCCcEEEEECCcccceeeeee
Q psy16373        144 QDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       144 ~d~~i~~wd~~~~~~~~~~~~  164 (166)
                       ++.|.+||+.+++.+..+..
T Consensus       153 -~~~i~~~d~~~~~~~~~~~~  172 (337)
T 1pby_B          153 -GRDLHVMDPEAGTLVEDKPI  172 (337)
T ss_dssp             -SSSEEEEETTTTEEEEEECS
T ss_pred             -CCeEEEEECCCCcEeeeeec
Confidence             68899999999887766543

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.46  E-value=2.5e-12  Score=97.61  Aligned_cols=99  Identities=15%  Similarity=0.045  Sum_probs=77.2

Q ss_pred             ceEEEEe--cCcEEEEEecCCeEEEEEccccc--ceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373         46 PITVLEC--VSNRVITGSQDHTLKVYKLEDQQ--LLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS  121 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~  121 (166)
                      .+.+++|  ++++|++++. +.|.+||+.+++  ....+..+...+..++|+|+|+.++.++ ++.|++||+.+++....
T Consensus       110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~  187 (741)
T 2ecf_A          110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQL  187 (741)
T ss_dssp             ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEEC
T ss_pred             CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEe
Confidence            3677888  8888998886 999999999873  4456667888899999999999999886 56899999998876654


Q ss_pred             eeccccc----------------EEEEEEcCC--eEEEeecCC
Q psy16373        122 IQAHDGC----------------IHALTYSDS--YVISLGQDE  146 (166)
Q Consensus       122 ~~~~~~~----------------v~~i~~~~~--~l~~~~~d~  146 (166)
                      ...+...                +..++|+|+  .|++++.|+
T Consensus       188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~  230 (741)
T 2ecf_A          188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE  230 (741)
T ss_dssp             CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred             ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence            4433332                467999994  788877665

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.46  E-value=4.1e-12  Score=87.89  Aligned_cols=76  Identities=12%  Similarity=-0.007  Sum_probs=62.7

Q ss_pred             eEEEEEcC-CCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373         87 ITTLFIDG-VSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus        87 v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      +.+++++| +++.++++  ++.+.+||+++++.+..+.. ...+..++|+|  +.|++++.++.|.+||.++++.+..++
T Consensus       257 ~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~  333 (349)
T 1jmx_B          257 YFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK  333 (349)
T ss_dssp             EEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEE
T ss_pred             ceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeee
Confidence            45667789 99888887  88999999999988877764 34567899998  377778889999999999999998887


Q ss_pred             ec
Q psy16373        164 LQ  165 (166)
Q Consensus       164 ~~  165 (166)
                      ++
T Consensus       334 ~~  335 (349)
T 1jmx_B          334 LP  335 (349)
T ss_dssp             CS
T ss_pred             cC
Confidence            65

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.46  E-value=3.8e-11  Score=82.69  Aligned_cols=149  Identities=8%  Similarity=0.024  Sum_probs=100.8

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCC---eEEEEEcccccceehhcC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDH---TLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~---~v~v~~~~~~~~~~~~~~   82 (166)
                      .+++++..++.+..|+......      ....+..+..+..++++  ++++++++..++   .|.+||+.+++.+..+..
T Consensus        53 ~l~~~~~~~~~i~~~d~~~~~~------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~  126 (331)
T 3u4y_A           53 NVVVTSDFCQTLVQIETQLEPP------KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI  126 (331)
T ss_dssp             EEEEEESTTCEEEEEECSSSSC------EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC
T ss_pred             EEEEEeCCCCeEEEEECCCCce------eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC
Confidence            4556666577777777654331      12334455556655777  788888655553   899999999888777664


Q ss_pred             CCCceEEEEEcCCCCEEE-EecCCCc-EEEEeCcCCeee----EEeecccccEEEEEEcCC--eEEEee-cCCcEEEEEC
Q psy16373         83 HCGPITTLFIDGVSMMSG-SGSQDGL-LCVWDTVTGACM----YSIQAHDGCIHALTYSDS--YVISLG-QDERLCVWDR  153 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~-~~~~d~~-v~~~d~~~~~~~----~~~~~~~~~v~~i~~~~~--~l~~~~-~d~~i~~wd~  153 (166)
                       .....+++|+|++++++ +...++. +.+|++.....+    ............++|+|+  +++.++ .++.|.+||+
T Consensus       127 -~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~  205 (331)
T 3u4y_A          127 -PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILET  205 (331)
T ss_dssp             -CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred             -CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence             34568999999987554 4456678 999998754322    111223455788999983  455544 6889999999


Q ss_pred             Ccccc---eeeee
Q psy16373        154 FQGHL---LSTIQ  163 (166)
Q Consensus       154 ~~~~~---~~~~~  163 (166)
                      .+++.   +..+.
T Consensus       206 ~~~~~~~~~~~~~  218 (331)
T 3u4y_A          206 QNPENITLLNAVG  218 (331)
T ss_dssp             SSTTSCEEEEEEE
T ss_pred             CCCcccceeeecc
Confidence            99988   66554

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.45  E-value=1.5e-12  Score=98.49  Aligned_cols=148  Identities=5%  Similarity=-0.123  Sum_probs=104.8

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCC---ceEEEEe--cCcEEEEEecC---------CeEEEEEc
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQ---PITVLEC--VSNRVITGSQD---------HTLKVYKL   71 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~--~~~~l~~~~~d---------~~v~v~~~   71 (166)
                      .+.++++ +.++.+.+|+......       ...+.+|..   .|.+++|  ++++|++++.+         +.+.+||+
T Consensus        27 dg~~~~~-~~dg~i~~~d~~~g~~-------~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~   98 (723)
T 1xfd_A           27 DTEFIYR-EQKGTVRLWNVETNTS-------TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKI   98 (723)
T ss_dssp             SSCBCCC-CSSSCEEEBCGGGCCC-------EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEES
T ss_pred             CCcEEEE-eCCCCEEEEECCCCcE-------EEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEEC
Confidence            3444555 6677888888765432       122334443   4888888  88999998764         78889999


Q ss_pred             ccccc--eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccE------------------EE
Q psy16373         72 EDQQL--LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCI------------------HA  131 (166)
Q Consensus        72 ~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v------------------~~  131 (166)
                      .+++.  +.....|...+..++|+|+|+.++.++. +.|++||+.+++.......+...+                  ..
T Consensus        99 ~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~  177 (723)
T 1xfd_A           99 PHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIA  177 (723)
T ss_dssp             SSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEE
T ss_pred             CCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcce
Confidence            98865  2222345556889999999999998875 799999999887766555433333                  78


Q ss_pred             EEEcCC--eEEEeecCC----------------------------------cEEEEECCcccceeee
Q psy16373        132 LTYSDS--YVISLGQDE----------------------------------RLCVWDRFQGHLLSTI  162 (166)
Q Consensus       132 i~~~~~--~l~~~~~d~----------------------------------~i~~wd~~~~~~~~~~  162 (166)
                      ++|+|+  .|++++.|+                                  .|++||+.+++....+
T Consensus       178 ~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l  244 (723)
T 1xfd_A          178 HWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEM  244 (723)
T ss_dssp             EEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEEC
T ss_pred             EEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEe
Confidence            999994  777776543                                  7999999888754433

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.45  E-value=1.7e-12  Score=96.18  Aligned_cols=138  Identities=9%  Similarity=0.028  Sum_probs=103.1

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecC----CeEEEEEcccccceehh
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQD----HTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d----~~v~v~~~~~~~~~~~~   80 (166)
                      +..+++++.++.. +|+......        ..+..+..  .+++|  +|+.|++++.+    ..|.+||+.+++.. .+
T Consensus       123 ~~~~~s~~~~~~~-l~d~~~g~~--------~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l  190 (582)
T 3o4h_A          123 AVVFTGATEDRVA-LYALDGGGL--------RELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VF  190 (582)
T ss_dssp             CEEEEEECSSCEE-EEEEETTEE--------EEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EE
T ss_pred             eEEEEecCCCCce-EEEccCCcE--------EEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-Ee
Confidence            3566677777666 565533221        11222222  56666  89999988877    78999999887754 56


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCC--cEEEEeCcCCeeeEEeecccccEEEEE--------EcCC--eEEEeecCCcE
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDG--LLCVWDTVTGACMYSIQAHDGCIHALT--------YSDS--YVISLGQDERL  148 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~--~v~~~d~~~~~~~~~~~~~~~~v~~i~--------~~~~--~l~~~~~d~~i  148 (166)
                      ..|...+..++|+|+|+.++++..++  .|++||+.+++.. .+..|...+..++        |+|+  .+++++.|+.+
T Consensus       191 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~  269 (582)
T 3o4h_A          191 DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRS  269 (582)
T ss_dssp             CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEE
T ss_pred             ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcE
Confidence            77888899999999999999888888  8999999988877 6666766666666        9984  77888899999


Q ss_pred             EEEECCcccce
Q psy16373        149 CVWDRFQGHLL  159 (166)
Q Consensus       149 ~~wd~~~~~~~  159 (166)
                      ++|++  ++.+
T Consensus       270 ~l~~~--g~~~  278 (582)
T 3o4h_A          270 AVFID--GERV  278 (582)
T ss_dssp             EEEET--TEEE
T ss_pred             EEEEE--CCee
Confidence            99998  5443

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.45  E-value=1e-11  Score=83.70  Aligned_cols=134  Identities=9%  Similarity=-0.039  Sum_probs=95.4

Q ss_pred             EEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccc-ccceehhcCC-CC
Q psy16373         10 LRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLED-QQLLFTLHGH-CG   85 (166)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~-~~~~~~~~~~-~~   85 (166)
                      ...++.++.+.+|+.....        ...+..|...+.+++|  ++++|++++ ++.|.+||+.+ ++.......+ ..
T Consensus        15 ~~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~   85 (297)
T 2ojh_A           15 GPGGSMRSSIEIFNIRTRK--------MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATI   85 (297)
T ss_dssp             ---CCCCEEEEEEETTTTE--------EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCC
T ss_pred             cCCCCcceeEEEEeCCCCc--------eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccc
Confidence            3455678889888875433        1134467889999999  788888876 78999999998 7776665555 36


Q ss_pred             ceEEEEEcCCCCEEEEec--CCCcEEEE--eCcCCeeeEEeecccccEEEEEEcCC--eEE-EeecCCcEEEEECC
Q psy16373         86 PITTLFIDGVSMMSGSGS--QDGLLCVW--DTVTGACMYSIQAHDGCIHALTYSDS--YVI-SLGQDERLCVWDRF  154 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~--~d~~v~~~--d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~-~~~~d~~i~~wd~~  154 (166)
                      .+.+++|+|+++.+++++  .++...+|  +..+++ ...+..+ ..+..++|+|+  .++ ++..|+.+.+|++.
T Consensus        86 ~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~  159 (297)
T 2ojh_A           86 CNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMD  159 (297)
T ss_dssp             BCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred             cccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEE
Confidence            788999999999999988  33445555  544444 3444433 35888999983  454 77889999999853

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.44  E-value=1.8e-11  Score=84.35  Aligned_cols=142  Identities=9%  Similarity=0.102  Sum_probs=93.3

Q ss_pred             EEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEec-CCeEEEEEc---ccccceehhcC
Q psy16373          9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQ-DHTLKVYKL---EDQQLLFTLHG   82 (166)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~-d~~v~v~~~---~~~~~~~~~~~   82 (166)
                      +++++..++.+.+|+.......   ......+..+. .+.+++|  +++++++++. ++.|.+||+   ...+....+..
T Consensus        52 l~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~  127 (343)
T 1ri6_A           52 LYVGVRPEFRVLAYRIAPDDGA---LTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG  127 (343)
T ss_dssp             EEEEETTTTEEEEEEECTTTCC---EEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC
T ss_pred             EEEeecCCCeEEEEEecCCCCc---eeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC
Confidence            4444444488888887522110   11222333333 6778888  7777766654 889999999   44444444443


Q ss_pred             CCCceEEEEEcCCCCEEEEec-CCCcEEEEeCcC-CeeeE----Eeec-ccccEEEEEEcCC--eEEEee-cCCcEEEEE
Q psy16373         83 HCGPITTLFIDGVSMMSGSGS-QDGLLCVWDTVT-GACMY----SIQA-HDGCIHALTYSDS--YVISLG-QDERLCVWD  152 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~-~d~~v~~~d~~~-~~~~~----~~~~-~~~~v~~i~~~~~--~l~~~~-~d~~i~~wd  152 (166)
                       ...+.+++|+|+++.+++++ .++.+.+||+.+ ++...    .+.. ....+..++|+|+  .++.++ .++.|.+||
T Consensus       128 -~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~  206 (343)
T 1ri6_A          128 -LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWE  206 (343)
T ss_dssp             -CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             -CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence             34588999999998777776 889999999987 54322    2222 2346788999983  555554 789999999


Q ss_pred             CCc
Q psy16373        153 RFQ  155 (166)
Q Consensus       153 ~~~  155 (166)
                      +..
T Consensus       207 ~~~  209 (343)
T 1ri6_A          207 LKD  209 (343)
T ss_dssp             SSC
T ss_pred             ecC
Confidence            953

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.43  E-value=4.6e-12  Score=99.71  Aligned_cols=117  Identities=12%  Similarity=0.081  Sum_probs=96.9

Q ss_pred             eeccCC-ceEEEEe-cCcEEEEEecCCeEE-EEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC
Q psy16373         40 TRAHHQ-PITVLEC-VSNRVITGSQDHTLK-VYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG  116 (166)
Q Consensus        40 ~~~~~~-~i~~~~~-~~~~l~~~~~d~~v~-v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~  116 (166)
                      +..|.. .+.+++| +++.|+.++.+..+. +|++.+++... +..|...+..++|+|+++.+++++.++.+++||+.++
T Consensus       332 ~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg  410 (1045)
T 1k32_A          332 VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG  410 (1045)
T ss_dssp             CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred             ccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCC
Confidence            345666 7888888 677888888888888 89998765443 3477788999999999999999999999999999999


Q ss_pred             eeeEEeecccccEEEEEEcCC--eEEEeecCC----------cEEEEECCccc
Q psy16373        117 ACMYSIQAHDGCIHALTYSDS--YVISLGQDE----------RLCVWDRFQGH  157 (166)
Q Consensus       117 ~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~----------~i~~wd~~~~~  157 (166)
                      +.......|...+..++|+|+  +|++++.++          .|++||+.+++
T Consensus       411 ~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~  463 (1045)
T 1k32_A          411 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK  463 (1045)
T ss_dssp             CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred             ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence            887777788889999999994  677776644          89999998876

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.42  E-value=1.5e-11  Score=96.84  Aligned_cols=115  Identities=11%  Similarity=0.040  Sum_probs=97.4

Q ss_pred             eccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCC----------cE
Q psy16373         41 RAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDG----------LL  108 (166)
Q Consensus        41 ~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~----------~v  108 (166)
                      .+|...+.+++|  +++.|++++.++.|++||+.+++....+..|...+.+++|+|++++++.++.++          .+
T Consensus       375 ~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i  454 (1045)
T 1k32_A          375 EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI  454 (1045)
T ss_dssp             CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred             cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeE
Confidence            367778999999  889999999999999999999887777667888999999999999998876644          89


Q ss_pred             EEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcc
Q psy16373        109 CVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQG  156 (166)
Q Consensus       109 ~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~  156 (166)
                      ++||+.+++ +..+..|...+..++|+|  ..|++++.++....|+....
T Consensus       455 ~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~  503 (1045)
T 1k32_A          455 HVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL  503 (1045)
T ss_dssp             EEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred             EEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcc
Confidence            999999887 666777888889999998  47888888888888876543

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.41  E-value=1.1e-11  Score=85.63  Aligned_cols=150  Identities=9%  Similarity=-0.018  Sum_probs=104.5

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccC-CceEEEEe--cCcEEE-EEecCCeEEEEEcccccceeh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHH-QPITVLEC--VSNRVI-TGSQDHTLKVYKLEDQQLLFT   79 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~--~~~~l~-~~~~d~~v~v~~~~~~~~~~~   79 (166)
                      +..+..+++++.++.+.+|+.....       ....+..+. ..+..+++  +++.++ ++..++.|.+||+.+++....
T Consensus         8 ~~~~~~~v~~~~~~~v~~~d~~~~~-------~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~   80 (349)
T 1jmx_B            8 KAGHEYMIVTNYPNNLHVVDVASDT-------VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH   80 (349)
T ss_dssp             CTTCEEEEEEETTTEEEEEETTTTE-------EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             cCCCEEEEEeCCCCeEEEEECCCCc-------EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEE
Confidence            4456788888889999999875432       112222222 24567777  666554 555789999999998887766


Q ss_pred             hcCCC------CceEEEEEcCCCCEEEEecCC------------CcEEEEeCcCCee---eEEeecccccEEEEEEcCC-
Q psy16373         80 LHGHC------GPITTLFIDGVSMMSGSGSQD------------GLLCVWDTVTGAC---MYSIQAHDGCIHALTYSDS-  137 (166)
Q Consensus        80 ~~~~~------~~v~~~~~~~~~~~~~~~~~d------------~~v~~~d~~~~~~---~~~~~~~~~~v~~i~~~~~-  137 (166)
                      +....      ..+..++++|+++++++++.+            +.+.+||+.+++.   +..+.. ...+.+++|+|+ 
T Consensus        81 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg  159 (349)
T 1jmx_B           81 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDG  159 (349)
T ss_dssp             EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTS
T ss_pred             EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCC
Confidence            55322      237889999999999888765            8999999988533   333433 345788899983 


Q ss_pred             eEEEeecCCcEEEEECCcccceeeee
Q psy16373        138 YVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       138 ~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      .+++++  +.|.+||+.+++.+..+.
T Consensus       160 ~l~~~~--~~i~~~d~~~~~~~~~~~  183 (349)
T 1jmx_B          160 SLYVAG--PDIYKMDVKTGKYTVALP  183 (349)
T ss_dssp             CEEEES--SSEEEECTTTCCEEEEEC
T ss_pred             cEEEcc--CcEEEEeCCCCceecccc
Confidence            455554  449999999998877654

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.41  E-value=6.2e-12  Score=95.15  Aligned_cols=153  Identities=8%  Similarity=-0.035  Sum_probs=104.3

Q ss_pred             ccceEEEEecCCC---------ceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcc
Q psy16373          4 SVHRIHLRTGSAG---------SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLE   72 (166)
Q Consensus         4 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~   72 (166)
                      ++.+..+++++.+         +.+.+|+......     ..+....+|...+..++|  +++.|+.++. +.|++||+.
T Consensus        69 SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-----~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~  142 (723)
T 1xfd_A           69 SPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-----QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHV  142 (723)
T ss_dssp             CTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-----EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSS
T ss_pred             CCCCCEEEEEecCccceeecceeeEEEEECCCCce-----EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECC
Confidence            3445555655543         5666777654331     112222345555778888  8888998876 799999999


Q ss_pred             cccceehhcCCCCc------------------eEEEEEcCCCCEEEEecCCC----------------------------
Q psy16373         73 DQQLLFTLHGHCGP------------------ITTLFIDGVSMMSGSGSQDG----------------------------  106 (166)
Q Consensus        73 ~~~~~~~~~~~~~~------------------v~~~~~~~~~~~~~~~~~d~----------------------------  106 (166)
                      +++.......+...                  +.+++|+|+++.++.++.++                            
T Consensus       143 ~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  222 (723)
T 1xfd_A          143 GKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAG  222 (723)
T ss_dssp             SSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTT
T ss_pred             CCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCC
Confidence            88765544443333                  37899999999999886543                            


Q ss_pred             ------cEEEEeCcCCeeeEEeecc------cccEEEEEEcCC--eEEEeec----CCcEEEEECCcccceeee
Q psy16373        107 ------LLCVWDTVTGACMYSIQAH------DGCIHALTYSDS--YVISLGQ----DERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       107 ------~v~~~d~~~~~~~~~~~~~------~~~v~~i~~~~~--~l~~~~~----d~~i~~wd~~~~~~~~~~  162 (166)
                            .+++||+.+++....+..+      ...+..++|+|+  .+++...    +..|.+||+.+++....+
T Consensus       223 ~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~  296 (723)
T 1xfd_A          223 SENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKH  296 (723)
T ss_dssp             SCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEE
T ss_pred             CCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEE
Confidence                  7999999888765556543      567899999994  5545432    357999999988765543

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.37  E-value=3.3e-11  Score=91.09  Aligned_cols=134  Identities=13%  Similarity=0.119  Sum_probs=97.6

Q ss_pred             ceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccc-----ccceehhcCCCCc---
Q psy16373         17 SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLED-----QQLLFTLHGHCGP---   86 (166)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~-----~~~~~~~~~~~~~---   86 (166)
                      +.+.+|+.....        ...+..+...+.+++|  +++.|+.+ .++.|.+||+.+     ++.......+...   
T Consensus       101 ~~i~~~d~~~~~--------~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~  171 (706)
T 2z3z_A          101 GGLVGFDMLARK--------VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVY  171 (706)
T ss_dssp             TEEEEEETTTTE--------EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEE
T ss_pred             CEEEEEECCCCc--------eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEc
Confidence            677777764332        1123345566777888  78888884 689999999998     7665544433332   


Q ss_pred             -----------eEEEEEcCCCCEEEEec---------------------------------CCCcEEEEeCcCCeeeEEe
Q psy16373         87 -----------ITTLFIDGVSMMSGSGS---------------------------------QDGLLCVWDTVTGACMYSI  122 (166)
Q Consensus        87 -----------v~~~~~~~~~~~~~~~~---------------------------------~d~~v~~~d~~~~~~~~~~  122 (166)
                                 +.+++|+|+++.+++++                                 .+..+++||+.+++.....
T Consensus       172 g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~  251 (706)
T 2z3z_A          172 GQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQ  251 (706)
T ss_dssp             SSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECC
T ss_pred             ccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeec
Confidence                       47899999999999887                                 4468999999988765443


Q ss_pred             e--cccccEEEEEEcCC--eEEEeecCC-----cEEEEECCcccce
Q psy16373        123 Q--AHDGCIHALTYSDS--YVISLGQDE-----RLCVWDRFQGHLL  159 (166)
Q Consensus       123 ~--~~~~~v~~i~~~~~--~l~~~~~d~-----~i~~wd~~~~~~~  159 (166)
                      .  .|...+..++|+|+  .|++++.++     .|.+||+.+++..
T Consensus       252 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~  297 (706)
T 2z3z_A          252 TGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFV  297 (706)
T ss_dssp             CCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEE
T ss_pred             cCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCcee
Confidence            2  45678899999994  688877765     8999999988433

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.37  E-value=3.9e-10  Score=78.71  Aligned_cols=150  Identities=8%  Similarity=0.007  Sum_probs=95.4

Q ss_pred             EEEEecCCCceEEEeecccccc------eeec-eeeeeeeeccCCceEEEEe--cCcEEEEEe-cCCeEEEEEcccccc-
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEE------MTLT-CCKVESTRAHHQPITVLEC--VSNRVITGS-QDHTLKVYKLEDQQL-   76 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~i~~~~~--~~~~l~~~~-~d~~v~v~~~~~~~~-   76 (166)
                      .+++++..++.+.+|+......      .... ...... ..+......++|  +++++++++ .++.|.+|++.+++. 
T Consensus       168 ~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~  246 (361)
T 3scy_A          168 YLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK-VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLD  246 (361)
T ss_dssp             EEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE-CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEE
T ss_pred             EEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee-cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceE
Confidence            3555666667777776654321      1100 001111 123445678888  777777776 689999999986643 


Q ss_pred             -eehh---cCCCCceEEEEEcCCCCEEEEecC--CCcEEEEeCc--CCe--eeEEeecccccEEEEEEcCC--eEEEee-
Q psy16373         77 -LFTL---HGHCGPITTLFIDGVSMMSGSGSQ--DGLLCVWDTV--TGA--CMYSIQAHDGCIHALTYSDS--YVISLG-  143 (166)
Q Consensus        77 -~~~~---~~~~~~v~~~~~~~~~~~~~~~~~--d~~v~~~d~~--~~~--~~~~~~~~~~~v~~i~~~~~--~l~~~~-  143 (166)
                       +..+   ..+......++|+|++++++++..  ++.+.+|++.  +++  .+..+.. ...+..++|+|+  +|++++ 
T Consensus       247 ~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~  325 (361)
T 3scy_A          247 EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACR  325 (361)
T ss_dssp             EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEET
T ss_pred             EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEEC
Confidence             2222   233455789999999998866655  4899999985  444  3444444 456778999983  677777 


Q ss_pred             cCCcEEEE--ECCcccce
Q psy16373        144 QDERLCVW--DRFQGHLL  159 (166)
Q Consensus       144 ~d~~i~~w--d~~~~~~~  159 (166)
                      .++.|.+|  |..+++..
T Consensus       326 ~~~~v~v~~~d~~~g~~~  343 (361)
T 3scy_A          326 DTNVIQIFERDQATGLLT  343 (361)
T ss_dssp             TTTEEEEEEECTTTCCEE
T ss_pred             CCCCEEEEEEECCCCcEe
Confidence            57889996  55566543

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.33  E-value=1.8e-11  Score=92.89  Aligned_cols=115  Identities=15%  Similarity=0.100  Sum_probs=91.0

Q ss_pred             CCceEEEEe--cCcEEEEEec-CC-----eEEEEEcccccceehhcCCC------------------------CceEEEE
Q psy16373         44 HQPITVLEC--VSNRVITGSQ-DH-----TLKVYKLEDQQLLFTLHGHC------------------------GPITTLF   91 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~~~~~-d~-----~v~v~~~~~~~~~~~~~~~~------------------------~~v~~~~   91 (166)
                      ...+.+++|  ++++|++++. |+     .|.+||+.+++....+..+.                        ..+.+++
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  115 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ  115 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence            346889999  8899999998 88     99999999887655444332                        2378899


Q ss_pred             EcCCCCEEEEecCCCcEEEEeCcCCe--eeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCccccee
Q psy16373         92 IDGVSMMSGSGSQDGLLCVWDTVTGA--CMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus        92 ~~~~~~~~~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      |+|+++.+++++. +.+++||+.++.  .+..+..+...+..++|+|+  .|+.++ ++.|++||+.+++...
T Consensus       116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~  186 (741)
T 2ecf_A          116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQ  186 (741)
T ss_dssp             ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred             ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEE
Confidence            9999999998876 899999998873  34556667788999999994  677666 5699999998876543

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.31  E-value=6.9e-10  Score=77.00  Aligned_cols=148  Identities=9%  Similarity=0.040  Sum_probs=95.4

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeec-cCCceEEEEe--cCcEEEE-EecCCeEEEEEccc--ccc--eeh
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRA-HHQPITVLEC--VSNRVIT-GSQDHTLKVYKLED--QQL--LFT   79 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--~~~~l~~-~~~d~~v~v~~~~~--~~~--~~~   79 (166)
                      .+++++..++.+.+|+.......    .....+.. .......++|  +++++++ ...++.+.+|++..  ++.  +..
T Consensus       153 ~l~v~~~~~~~v~~~~~~~~g~~----~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~  228 (347)
T 3hfq_A          153 RLAVIDLGSDKVYVYNVSDAGQL----SEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGI  228 (347)
T ss_dssp             CEEEEETTTTEEEEEEECTTSCE----EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEE
T ss_pred             cEEEEeCCCCEEEEEEECCCCcE----EEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeee
Confidence            36666667777777776522211    11111121 2235667888  7776555 55689999999874  332  222


Q ss_pred             hcCCC------CceEEEEEcCCCCEE-EEecCCCcEEEEeCcC---CeeeEEeecccccEEEEEEcCC--eEEEeec-CC
Q psy16373         80 LHGHC------GPITTLFIDGVSMMS-GSGSQDGLLCVWDTVT---GACMYSIQAHDGCIHALTYSDS--YVISLGQ-DE  146 (166)
Q Consensus        80 ~~~~~------~~v~~~~~~~~~~~~-~~~~~d~~v~~~d~~~---~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~-d~  146 (166)
                      +....      ..+..++|+|+++++ ++...++.+.+|++..   .+.+..+..+...+..++|+|+  +|++++. ++
T Consensus       229 ~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~  308 (347)
T 3hfq_A          229 VKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTD  308 (347)
T ss_dssp             EESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTT
T ss_pred             eeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCC
Confidence            22211      358899999999876 5566689999999872   2455555555666789999983  6777775 48


Q ss_pred             cEEEE--ECCcccce
Q psy16373        147 RLCVW--DRFQGHLL  159 (166)
Q Consensus       147 ~i~~w--d~~~~~~~  159 (166)
                      .|.+|  |..+++..
T Consensus       309 ~v~v~~~d~~tg~l~  323 (347)
T 3hfq_A          309 NATLYARDLTSGKLS  323 (347)
T ss_dssp             EEEEEEECTTTCCEE
T ss_pred             cEEEEEEeCCCCeEE
Confidence            99999  55566654

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.31  E-value=3.1e-10  Score=78.78  Aligned_cols=139  Identities=13%  Similarity=0.121  Sum_probs=88.6

Q ss_pred             CCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEec---CCeEEEEEccccc--ceehhcCCCCc
Q psy16373         14 SAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQ---DHTLKVYKLEDQQ--LLFTLHGHCGP   86 (166)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~---d~~v~v~~~~~~~--~~~~~~~~~~~   86 (166)
                      +.++-+.+|.........   ... ....+......++|  +++ |++++.   ++.|.+|++.+++  .+..+..+...
T Consensus        13 ~~~~~i~v~~~d~~tg~~---~~~-~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~   87 (347)
T 3hfq_A           13 KTSQGIYQGTLDTTAKTL---TND-GLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTP   87 (347)
T ss_dssp             SSCCEEEEEEEETTTTEE---EEE-EEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCC
T ss_pred             CCCCCEEEEEEcCCCCeE---EEe-eeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCC
Confidence            344556666665422111   111 12234455667888  666 665554   6899999997664  34444446677


Q ss_pred             eEEEEEcCCCCEEEEec-CCCcEEEEeCc-CC--eeeEEeecc---------cccEEEEEEcC--CeEEEeecCCcEEEE
Q psy16373         87 ITTLFIDGVSMMSGSGS-QDGLLCVWDTV-TG--ACMYSIQAH---------DGCIHALTYSD--SYVISLGQDERLCVW  151 (166)
Q Consensus        87 v~~~~~~~~~~~~~~~~-~d~~v~~~d~~-~~--~~~~~~~~~---------~~~v~~i~~~~--~~l~~~~~d~~i~~w  151 (166)
                      +..++++|+++++++++ .++.+.+|++. ++  ..+..+...         ...+..++|+|  ..+++...++.|.+|
T Consensus        88 p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~  167 (347)
T 3hfq_A           88 PAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVY  167 (347)
T ss_dssp             CSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred             CEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEE
Confidence            88999999999887776 77899999996 33  333333221         12478899998  344444567889999


Q ss_pred             ECC-ccc
Q psy16373        152 DRF-QGH  157 (166)
Q Consensus       152 d~~-~~~  157 (166)
                      ++. +++
T Consensus       168 ~~~~~g~  174 (347)
T 3hfq_A          168 NVSDAGQ  174 (347)
T ss_dssp             EECTTSC
T ss_pred             EECCCCc
Confidence            998 443

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.31  E-value=1e-09  Score=74.19  Aligned_cols=143  Identities=13%  Similarity=0.097  Sum_probs=96.2

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeee--ccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR--AHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      +.++++...++.+..++....        ....+.  ++...+.++++  +++++++...++.|.+||.. ++.+..+..
T Consensus       132 g~l~v~~~~~~~i~~~~~~g~--------~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~  202 (286)
T 1q7f_A          132 GRIIVVECKVMRVIIFDQNGN--------VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGG  202 (286)
T ss_dssp             SCEEEEETTTTEEEEECTTSC--------EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESC
T ss_pred             CCEEEEECCCCEEEEEcCCCC--------EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEcc
Confidence            345555555555655553211        111121  34456788998  56666666778999999985 444444433


Q ss_pred             C--CCceEEEEEcCCCCEEEEecCCC-cEEEEeCcCCeeeEEeecccc--cEEEEEEcC-CeEEEeecCCcEEEEECCcc
Q psy16373         83 H--CGPITTLFIDGVSMMSGSGSQDG-LLCVWDTVTGACMYSIQAHDG--CIHALTYSD-SYVISLGQDERLCVWDRFQG  156 (166)
Q Consensus        83 ~--~~~v~~~~~~~~~~~~~~~~~d~-~v~~~d~~~~~~~~~~~~~~~--~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~  156 (166)
                      +  ...+..++++++++.+++...++ .|.+||. +++.+..+..+..  .+.+++++| ..++.++.|+.|++|+....
T Consensus       203 ~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~~  281 (286)
T 1q7f_A          203 EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQL  281 (286)
T ss_dssp             TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSCC
T ss_pred             CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEcccc
Confidence            2  35789999999999998887776 9999995 5666666654432  467899998 45555578999999998765


Q ss_pred             cce
Q psy16373        157 HLL  159 (166)
Q Consensus       157 ~~~  159 (166)
                      .++
T Consensus       282 ~pv  284 (286)
T 1q7f_A          282 APV  284 (286)
T ss_dssp             CCT
T ss_pred             ccc
Confidence            543

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.26  E-value=4.9e-09  Score=73.12  Aligned_cols=146  Identities=5%  Similarity=0.065  Sum_probs=91.2

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeee--------ccCCceEEEEe--cCcEEEEEe-cCCeEEEEEcccccc
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR--------AHHQPITVLEC--VSNRVITGS-QDHTLKVYKLEDQQL   76 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~~~--~~~~l~~~~-~d~~v~v~~~~~~~~   76 (166)
                      .++++...++.+.+|+.......... .......        .+...+.+++|  +++++++++ .++.|.+|++.....
T Consensus       111 ~l~~~~~~~~~v~~~~~~~~g~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~  189 (361)
T 3scy_A          111 NIVTANYSGGSITVFPIGQDGALLPA-SDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNAN  189 (361)
T ss_dssp             EEEEEETTTTEEEEEEBCTTSCBCSC-SEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCC
T ss_pred             EEEEEECCCCEEEEEEeCCCCcCccc-ceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCC
Confidence            35555556778888887543211100 0000011        12234578888  777666555 489999999875431


Q ss_pred             ------e-------ehhcCCCCceEEEEEcCCCCEEEEec-CCCcEEEEeCcCCee--eEEee---cccccEEEEEEcCC
Q psy16373         77 ------L-------FTLHGHCGPITTLFIDGVSMMSGSGS-QDGLLCVWDTVTGAC--MYSIQ---AHDGCIHALTYSDS  137 (166)
Q Consensus        77 ------~-------~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~v~~~d~~~~~~--~~~~~---~~~~~v~~i~~~~~  137 (166)
                            +       ............++|+|+++++++++ .++.|.+||+.+++.  +..+.   .+......++|+|+
T Consensus       190 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spd  269 (361)
T 3scy_A          190 ADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPD  269 (361)
T ss_dssp             TTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTT
T ss_pred             cccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCC
Confidence                  1       11122445678999999998776665 689999999987743  33332   22345679999983


Q ss_pred             --eEEEeec--CCcEEEEECC
Q psy16373        138 --YVISLGQ--DERLCVWDRF  154 (166)
Q Consensus       138 --~l~~~~~--d~~i~~wd~~  154 (166)
                        +|+++..  ++.|.+|++.
T Consensus       270 g~~l~v~~~~~~~~i~v~~~~  290 (361)
T 3scy_A          270 GKYLYASNRLKADGVAIFKVD  290 (361)
T ss_dssp             SSEEEEEECSSSCEEEEEEEC
T ss_pred             CCEEEEECCCCCCEEEEEEEc
Confidence              6766655  4889999985

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.25  E-value=1.2e-09  Score=73.91  Aligned_cols=148  Identities=12%  Similarity=0.069  Sum_probs=107.9

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccC-CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHH-QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      .....+++++.++.+.+++....+       .+..+..+. ..+.++.+  ++++++  +.++.|..||. +++.+.++.
T Consensus         3 ~~~~~lv~~~~~~~v~~~d~~tG~-------~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~   72 (276)
T 3no2_A            3 SPQHLLVGGSGWNKIAIINKDTKE-------IVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIA   72 (276)
T ss_dssp             CCCEEEEECTTCSEEEEEETTTTE-------EEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEE
T ss_pred             CCCcEEEeeCCCCEEEEEECCCCe-------EEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEc
Confidence            345778889999999988864433       233444443 35667777  777777  45788999999 788888887


Q ss_pred             CC-CCceEEEEEcCCCCEEEEecC-CCcEEEEeCcCCeeeEEeec------ccccEEEEEEcC--CeEEEeecCCcEEEE
Q psy16373         82 GH-CGPITTLFIDGVSMMSGSGSQ-DGLLCVWDTVTGACMYSIQA------HDGCIHALTYSD--SYVISLGQDERLCVW  151 (166)
Q Consensus        82 ~~-~~~v~~~~~~~~~~~~~~~~~-d~~v~~~d~~~~~~~~~~~~------~~~~v~~i~~~~--~~l~~~~~d~~i~~w  151 (166)
                      .+ ...+.+..+.++++.+++.+. ++.+..+|. +++.+..+..      +......+++.+  +++++...++.|..|
T Consensus        73 ~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~  151 (276)
T 3no2_A           73 APAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREI  151 (276)
T ss_dssp             CCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEE
T ss_pred             CCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEE
Confidence            64 357889999999999998876 778888885 6777666542      112333445555  588888889999999


Q ss_pred             ECCcccceeeeee
Q psy16373        152 DRFQGHLLSTIQL  164 (166)
Q Consensus       152 d~~~~~~~~~~~~  164 (166)
                      |.. |+.+.++..
T Consensus       152 d~~-G~~~w~~~~  163 (276)
T 3no2_A          152 APN-GQLLNSVKL  163 (276)
T ss_dssp             CTT-SCEEEEEEC
T ss_pred             CCC-CCEEEEEEC
Confidence            987 999988765

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.24  E-value=1.2e-10  Score=88.30  Aligned_cols=129  Identities=12%  Similarity=0.038  Sum_probs=87.2

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCC---ceEEEEe--cCcEEEEEec---------CCeEEEEEcc
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQ---PITVLEC--VSNRVITGSQ---------DHTLKVYKLE   72 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~--~~~~l~~~~~---------d~~v~v~~~~   72 (166)
                      +..++++ .++.+.+|+......       ...+.++..   .+.+++|  ++++|++++.         ++.+++||+.
T Consensus        27 g~~~~~~-~d~~i~~~~~~~g~~-------~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~   98 (719)
T 1z68_A           27 QEYLHQS-ADNNIVLYNIETGQS-------YTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS   98 (719)
T ss_dssp             SEEEEEC-TTSCEEEEESSSCCE-------EEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred             CeEEEEc-CCCCEEEEEcCCCcE-------EEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence            4344444 577888888754431       112223322   3788888  8899988876         7899999999


Q ss_pred             cccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe-ecccccE-----------------EEEEE
Q psy16373         73 DQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI-QAHDGCI-----------------HALTY  134 (166)
Q Consensus        73 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~v-----------------~~i~~  134 (166)
                      +++.+.... ....+..++|+|+|+.++.+. ++.|++||+.+++..... .++...+                 ..++|
T Consensus        99 ~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~w  176 (719)
T 1z68_A           99 NGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWW  176 (719)
T ss_dssp             TTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEE
T ss_pred             CCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEE
Confidence            887631111 124688899999999999875 789999999887654422 2222222                 47999


Q ss_pred             cCC--eEEEeecC
Q psy16373        135 SDS--YVISLGQD  145 (166)
Q Consensus       135 ~~~--~l~~~~~d  145 (166)
                      +|+  .|++++.|
T Consensus       177 SPDG~~la~~~~d  189 (719)
T 1z68_A          177 SPNGKFLAYAEFN  189 (719)
T ss_dssp             CTTSSEEEEEEEE
T ss_pred             CCCCCEEEEEEEC
Confidence            994  78877755

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.23  E-value=3.9e-10  Score=85.21  Aligned_cols=116  Identities=13%  Similarity=0.116  Sum_probs=85.3

Q ss_pred             ccCCceEEEEe--cCcEEEEEecCC-----eEEEEEcccccceehhc--CCC---CceEEEEEcC--CCCEEEEecCCCc
Q psy16373         42 AHHQPITVLEC--VSNRVITGSQDH-----TLKVYKLEDQQLLFTLH--GHC---GPITTLFIDG--VSMMSGSGSQDGL  107 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~~~~d~-----~v~v~~~~~~~~~~~~~--~~~---~~v~~~~~~~--~~~~~~~~~~d~~  107 (166)
                      .|...+.+++|  +++.|++++.++     .|.+||+.+++....+.  .+.   ..+..+.|+|  +++++++++.|+.
T Consensus       255 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~  334 (706)
T 2z3z_A          255 PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGW  334 (706)
T ss_dssp             CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSS
T ss_pred             CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCc
Confidence            46678999999  888898887775     99999999883333322  122   2346789999  9999999999999


Q ss_pred             EEEEeCc-CCeeeEEeecccccEEE-EEEcCC--eEEEe-ecCC----cEEEEECCccc
Q psy16373        108 LCVWDTV-TGACMYSIQAHDGCIHA-LTYSDS--YVISL-GQDE----RLCVWDRFQGH  157 (166)
Q Consensus       108 v~~~d~~-~~~~~~~~~~~~~~v~~-i~~~~~--~l~~~-~~d~----~i~~wd~~~~~  157 (166)
                      +++|++. ++..+..+..+...+.. ++|+|+  .|+.+ ..++    .|..||..+++
T Consensus       335 ~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~  393 (706)
T 2z3z_A          335 NHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK  393 (706)
T ss_dssp             CEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred             cEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence            9999876 66777777777777876 799983  55444 4444    67777877664

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.21  E-value=7.6e-10  Score=82.04  Aligned_cols=109  Identities=17%  Similarity=0.103  Sum_probs=81.1

Q ss_pred             eEEEEecCc-EEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC----CcEEEEeCcCCeeeEE
Q psy16373         47 ITVLECVSN-RVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD----GLLCVWDTVTGACMYS  121 (166)
Q Consensus        47 i~~~~~~~~-~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d----~~v~~~d~~~~~~~~~  121 (166)
                      +.+++++++ .+++.+.++.+.+||+.+++.......+ .  .+++|+|+|+.+++++.+    +.|++||+.+++.. .
T Consensus       114 ~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~  189 (582)
T 3o4h_A          114 ILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-V  189 (582)
T ss_dssp             EEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-E
T ss_pred             eeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-E
Confidence            445555554 3344444455569999988654433322 2  789999999999987766    78999999888754 5


Q ss_pred             eecccccEEEEEEcCC--eEEEeecCC--cEEEEECCcccce
Q psy16373        122 IQAHDGCIHALTYSDS--YVISLGQDE--RLCVWDRFQGHLL  159 (166)
Q Consensus       122 ~~~~~~~v~~i~~~~~--~l~~~~~d~--~i~~wd~~~~~~~  159 (166)
                      +..|...+..++|+|+  .|+++..++  .|++||+.+++..
T Consensus       190 l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~  231 (582)
T 3o4h_A          190 FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE  231 (582)
T ss_dssp             ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred             eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence            6778888999999994  788777788  8999999887765

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.14  E-value=2.3e-08  Score=69.21  Aligned_cols=121  Identities=12%  Similarity=0.102  Sum_probs=88.1

Q ss_pred             ccCCceEEEEe--cCcEEEEEecCCeEEEEEccccc-ceehh---------cCCCCceEEEEEcC-CCCEEEEec-CCCc
Q psy16373         42 AHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ-LLFTL---------HGHCGPITTLFIDG-VSMMSGSGS-QDGL  107 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~~~~~~-~d~~  107 (166)
                      ++......+++  +++++++...++.|++||..... .+..+         ..+......++++| ++..+++.+ .++.
T Consensus        88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~  167 (329)
T 3fvz_A           88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR  167 (329)
T ss_dssp             TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE
T ss_pred             CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe
Confidence            34456788888  67778887888999999986442 33333         23445689999999 788888886 6899


Q ss_pred             EEEEeCcCCeeeEEeeccc----------ccEEEEEEcC--CeE-EEeecCCcEEEEECCcccceeeee
Q psy16373        108 LCVWDTVTGACMYSIQAHD----------GCIHALTYSD--SYV-ISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       108 v~~~d~~~~~~~~~~~~~~----------~~v~~i~~~~--~~l-~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      |++|| .++..+..+....          .....++++|  +.+ ++...++.|++||..+++.+..+.
T Consensus       168 I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~  235 (329)
T 3fvz_A          168 IVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIK  235 (329)
T ss_dssp             EEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred             EEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEe
Confidence            99999 5677666664221          2378899987  344 444567899999998888877663

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.13  E-value=2.2e-08  Score=69.24  Aligned_cols=149  Identities=9%  Similarity=0.077  Sum_probs=100.8

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeee---------eccCCceEEEEe---cCcEEEEEe-cCCeEEEEEccc
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVEST---------RAHHQPITVLEC---VSNRVITGS-QDHTLKVYKLED   73 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~~~---~~~~l~~~~-~d~~v~v~~~~~   73 (166)
                      +.++++...++.+..++......      .+..+         .++......+++   ++.++++.+ .++.|++|+ .+
T Consensus       102 g~l~v~d~~~~~v~~~~~~g~~~------~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~  174 (329)
T 3fvz_A          102 GNYWVTDVALHQVFKLDPHSKEG------PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PS  174 (329)
T ss_dssp             SCEEEEETTTTEEEEECTTCSSC------CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TT
T ss_pred             CCEEEEECCCCEEEEEeCCCCeE------EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CC
Confidence            34566666666666666532210      11111         234446788898   245555554 589999999 45


Q ss_pred             ccceehhcC----------CCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeEEee--cccccEEEEEEcCCeEE
Q psy16373         74 QQLLFTLHG----------HCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMYSIQ--AHDGCIHALTYSDSYVI  140 (166)
Q Consensus        74 ~~~~~~~~~----------~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~~~~--~~~~~v~~i~~~~~~l~  140 (166)
                      ++.+..+..          +......++++|+ +..+++...++.|++||..+++.+..+.  .+...+..++|+|..++
T Consensus       175 g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~  254 (329)
T 3fvz_A          175 GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLF  254 (329)
T ss_dssp             SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEE
T ss_pred             CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEE
Confidence            665555432          2234789999998 8888888889999999998888888774  34567888999986444


Q ss_pred             Eeec--------CCcEEEEECCcccceeee
Q psy16373        141 SLGQ--------DERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       141 ~~~~--------d~~i~~wd~~~~~~~~~~  162 (166)
                      ....        +..|++||..+++.+..+
T Consensus       255 ~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~  284 (329)
T 3fvz_A          255 AVNGKPYFGDQEPVQGFVMNFSSGEIIDVF  284 (329)
T ss_dssp             EEECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred             EeCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence            4432        348999999999888766

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.13  E-value=2.1e-09  Score=80.70  Aligned_cols=115  Identities=10%  Similarity=-0.017  Sum_probs=85.5

Q ss_pred             cCCceEEEEe--cCcEEEEEecC----------CeEEEEEccc------ccceehhc-CCCCceEEEEEcCCCCEEEEec
Q psy16373         43 HHQPITVLEC--VSNRVITGSQD----------HTLKVYKLED------QQLLFTLH-GHCGPITTLFIDGVSMMSGSGS  103 (166)
Q Consensus        43 ~~~~i~~~~~--~~~~l~~~~~d----------~~v~v~~~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~  103 (166)
                      |...+.+++|  +++.|+.++.+          ..|.+||+.+      ++. ..+. .+...+..++|+|+|+.++..+
T Consensus       128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~  206 (662)
T 3azo_A          128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLA  206 (662)
T ss_dssp             TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEE
T ss_pred             CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEE
Confidence            5567888888  88899988877          5899999987      544 3444 5566788899999999998776


Q ss_pred             CC--------CcEEEEeCc-CC---eeeEEeecccccEEEEEEcCC--eEEEeecCC--cEEEEECCcccc
Q psy16373        104 QD--------GLLCVWDTV-TG---ACMYSIQAHDGCIHALTYSDS--YVISLGQDE--RLCVWDRFQGHL  158 (166)
Q Consensus       104 ~d--------~~v~~~d~~-~~---~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~--~i~~wd~~~~~~  158 (166)
                      .+        ..|++||+. ++   +.......+...+..+.|+|+  +++++..++  .|..||+.+++.
T Consensus       207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~  277 (662)
T 3azo_A          207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAA  277 (662)
T ss_dssp             ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCE
T ss_pred             CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCce
Confidence            44        379999998 56   443334445678999999983  667777777  677777656553

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.13  E-value=2.8e-10  Score=86.19  Aligned_cols=149  Identities=14%  Similarity=0.067  Sum_probs=96.2

Q ss_pred             ccceEEEEecCC---------CceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcc
Q psy16373          4 SVHRIHLRTGSA---------GSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLE   72 (166)
Q Consensus         4 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~   72 (166)
                      ++.+..++.++.         ++.+.+|+....+...     ...+   ...+..++|  +|+.|+.+. ++.|++|++.
T Consensus        68 SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~-----~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~  138 (719)
T 1z68_A           68 SPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR-----GNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRP  138 (719)
T ss_dssp             CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-----SSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESST
T ss_pred             CCCCCeEEEEecCceeEEeecceEEEEEECCCCcccc-----ceec---CcccccceECCCCCEEEEEE-CCeEEEEeCC
Confidence            344555555554         5677778765433100     0111   135777888  888888875 7899999998


Q ss_pred             cccceehh-cCCCCce-----------------EEEEEcCCCCEEEEecCCC----------------------------
Q psy16373         73 DQQLLFTL-HGHCGPI-----------------TTLFIDGVSMMSGSGSQDG----------------------------  106 (166)
Q Consensus        73 ~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~~~~~~~d~----------------------------  106 (166)
                      +++..... .++...+                 .+++|+|+|+.++.++.|.                            
T Consensus       139 ~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g  218 (719)
T 1z68_A          139 GDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAG  218 (719)
T ss_dssp             TSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTT
T ss_pred             CCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCC
Confidence            87654332 2222222                 4899999999999887552                            


Q ss_pred             ------cEEEEeCcCCeee--------EEeecccccEEEEEEcCC--eEEEeecC----CcEEEEE----CCcccceee
Q psy16373        107 ------LLCVWDTVTGACM--------YSIQAHDGCIHALTYSDS--YVISLGQD----ERLCVWD----RFQGHLLST  161 (166)
Q Consensus       107 ------~v~~~d~~~~~~~--------~~~~~~~~~v~~i~~~~~--~l~~~~~d----~~i~~wd----~~~~~~~~~  161 (166)
                            .+++||+.+++..        ..+.+|...+..++|+|+  .+++....    ..|.+||    +.+++....
T Consensus       219 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~  297 (719)
T 1z68_A          219 AKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKT  297 (719)
T ss_dssp             SCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGG
T ss_pred             CCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEE
Confidence                  7889999877642        123357778999999995  44443322    2488899    777765443

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.11  E-value=3.6e-08  Score=66.54  Aligned_cols=118  Identities=10%  Similarity=0.169  Sum_probs=84.8

Q ss_pred             cCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc--CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee
Q psy16373         43 HHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH--GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC  118 (166)
Q Consensus        43 ~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~  118 (166)
                      +...+.++++  +++++++...++.|.+||.. ++.+..+.  .+...+..++++++++.+++...++.|.+||. +++.
T Consensus       119 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~  196 (286)
T 1q7f_A          119 ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQY  196 (286)
T ss_dssp             TCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCE
T ss_pred             cCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCE
Confidence            3456788888  66777776778999999965 44444443  34456899999999998888888999999997 4555


Q ss_pred             eEEeecc--cccEEEEEEcCC--eEEEeecCC-cEEEEECCcccceeeee
Q psy16373        119 MYSIQAH--DGCIHALTYSDS--YVISLGQDE-RLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       119 ~~~~~~~--~~~v~~i~~~~~--~l~~~~~d~-~i~~wd~~~~~~~~~~~  163 (166)
                      +..+..+  ...+..++++++  .+++...++ .|.+||. +++.+..+.
T Consensus       197 ~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~  245 (286)
T 1q7f_A          197 LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALE  245 (286)
T ss_dssp             EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEE
T ss_pred             EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEc
Confidence            6666433  256789999883  445554565 9999995 566666554

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.10  E-value=1e-08  Score=72.49  Aligned_cols=116  Identities=10%  Similarity=0.091  Sum_probs=86.0

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCce
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPI   87 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v   87 (166)
                      ..++.+ .++.+.+|+........       ....|..++.++.+....+++++.||.+.+||+.++....    +...|
T Consensus        98 ~~L~v~-~~~~l~v~dv~sl~~~~-------~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~~~~V  165 (388)
T 1xip_A           98 DQVLVS-TRNALYSLDLEELSEFR-------TVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----LAQNV  165 (388)
T ss_dssp             TEEEEE-ESSEEEEEESSSTTCEE-------EEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE----EEESE
T ss_pred             CEEEEE-cCCcEEEEEchhhhccC-------ccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc----ccCCc
Confidence            355556 77788888876543211       2345566788888833348889999999999999776542    45689


Q ss_pred             EEEEEcCCCCEEEEecCCCcEEEEeCcCCee--eEEe------e---cccccEEEEEEcCC
Q psy16373         88 TTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC--MYSI------Q---AHDGCIHALTYSDS  137 (166)
Q Consensus        88 ~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~--~~~~------~---~~~~~v~~i~~~~~  137 (166)
                      ++++|+|.|  ++.|..||.+++|+....+.  ...+      .   +|...|.++.|.++
T Consensus       166 s~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~  224 (388)
T 1xip_A          166 TSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSP  224 (388)
T ss_dssp             EEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSS
T ss_pred             eEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecC
Confidence            999999999  67788999999999877764  4555      2   36778999999974

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.07  E-value=1.5e-07  Score=65.88  Aligned_cols=141  Identities=7%  Similarity=-0.004  Sum_probs=89.8

Q ss_pred             CCceEEEeecccccceeeceeeeeeee-ccCCceEEEEe--cCcEEEEEec-CCeEEEEEcc-cccce--ehhc--CCCC
Q psy16373         15 AGSLLDFKKMQVEEEMTLTCCKVESTR-AHHQPITVLEC--VSNRVITGSQ-DHTLKVYKLE-DQQLL--FTLH--GHCG   85 (166)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~--~~~~l~~~~~-d~~v~v~~~~-~~~~~--~~~~--~~~~   85 (166)
                      .++.+.+|+........   .....+. .+...+.+++|  +++++++++. ++.|.+|++. +++..  ..+.  .+..
T Consensus       117 ~~g~v~v~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~  193 (365)
T 1jof_A          117 FAGYGNVFSVSETGKLE---KNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGD  193 (365)
T ss_dssp             SCCEEEEEEECTTCCEE---EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC
T ss_pred             CCceEEEEccCCCCcCc---ceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC
Confidence            56677777765322111   1111111 24567889999  7778877654 6899999998 66542  2333  2356


Q ss_pred             ceEEEEEcCCCCEEEEec-CCCcEEEEeCc--CCeee---EEee-------cccc------cEEEEE-EcCC--eEEEee
Q psy16373         86 PITTLFIDGVSMMSGSGS-QDGLLCVWDTV--TGACM---YSIQ-------AHDG------CIHALT-YSDS--YVISLG  143 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~-~d~~v~~~d~~--~~~~~---~~~~-------~~~~------~v~~i~-~~~~--~l~~~~  143 (166)
                      .+..++|+|+++++++++ .++.+.+|++.  +++..   ..+.       +|..      .+..++ |+|+  +|++++
T Consensus       194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~  273 (365)
T 1jof_A          194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS  273 (365)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred             CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence            689999999998887765 46899999765  45432   1222       1121      478899 9984  676665


Q ss_pred             cC-C-----cEEEEECC-cccc
Q psy16373        144 QD-E-----RLCVWDRF-QGHL  158 (166)
Q Consensus       144 ~d-~-----~i~~wd~~-~~~~  158 (166)
                      .+ .     .|.+|++. +++.
T Consensus       274 ~~~~~~~~~~i~v~~~~~~g~~  295 (365)
T 1jof_A          274 RANKFELQGYIAGFKLRDCGSI  295 (365)
T ss_dssp             EESSTTSCCEEEEEEECTTSCE
T ss_pred             CCCCCCCCCeEEEEEECCCCCE
Confidence            43 3     89999996 5554

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.04  E-value=1.5e-08  Score=77.34  Aligned_cols=127  Identities=10%  Similarity=-0.039  Sum_probs=85.3

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCC-----ceEEEEe--cCcEEEEEecC---------CeEEEEE
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQ-----PITVLEC--VSNRVITGSQD---------HTLKVYK   70 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~--~~~~l~~~~~d---------~~v~v~~   70 (166)
                      +..++++  ++.+.+|+.......       ..+.+|..     ....++|  ++++|+.++.+         +.+.+||
T Consensus        28 g~~~~~~--~~~i~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d   98 (740)
T 4a5s_A           28 HEYLYKQ--ENNILVFNAEYGNSS-------VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD   98 (740)
T ss_dssp             SEEEEEE--TTEEEEEETTTCCEE-------EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             CcEEEEc--CCcEEEEECCCCceE-------EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEE
Confidence            4566665  778888887654321       12333332     2333556  88999988876         5667999


Q ss_pred             cccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE-eecccccE-----------------EEE
Q psy16373         71 LEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS-IQAHDGCI-----------------HAL  132 (166)
Q Consensus        71 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~v-----------------~~i  132 (166)
                      +.+++.. .+..+...+...+|+|+|+.++.+ .++.|++||+.+++..+. ..++...+                 ..+
T Consensus        99 ~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~  176 (740)
T 4a5s_A           99 LNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSAL  176 (740)
T ss_dssp             TTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCE
T ss_pred             CCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcce
Confidence            9988754 456677889999999999999887 478999999987764432 22222222                 248


Q ss_pred             EEcCC--eEEEeec
Q psy16373        133 TYSDS--YVISLGQ  144 (166)
Q Consensus       133 ~~~~~--~l~~~~~  144 (166)
                      .|+|+  .|+..+.
T Consensus       177 ~wSpDg~~la~~~~  190 (740)
T 4a5s_A          177 WWSPNGTFLAYAQF  190 (740)
T ss_dssp             EECTTSSEEEEEEE
T ss_pred             EECCCCCEEEEEEE
Confidence            89994  6766643

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.03  E-value=1.2e-08  Score=69.14  Aligned_cols=107  Identities=8%  Similarity=0.073  Sum_probs=86.9

Q ss_pred             CcEEEEEecCCeEEEEEcccccceehhcCCC-CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeeccc-ccEEE
Q psy16373         54 SNRVITGSQDHTLKVYKLEDQQLLFTLHGHC-GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHD-GCIHA  131 (166)
Q Consensus        54 ~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~v~~  131 (166)
                      ++.|++++.++.|.+||.++++.+.++..+. ..+.++.+.|+++.++  +.++.+..||. +++.+..+..+. ..+.+
T Consensus         5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~   81 (276)
T 3no2_A            5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQT   81 (276)
T ss_dssp             CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred             CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence            5788999999999999999999999888765 4788999999999888  34778999998 899998887653 46778


Q ss_pred             EEEcC--CeEEEeec-CCcEEEEECCcccceeeeee
Q psy16373        132 LTYSD--SYVISLGQ-DERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       132 i~~~~--~~l~~~~~-d~~i~~wd~~~~~~~~~~~~  164 (166)
                      +.+.+  +.+++.+. ++.|..+|. +|+.+.++.+
T Consensus        82 ~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~  116 (276)
T 3no2_A           82 ARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEF  116 (276)
T ss_dssp             EEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEE
T ss_pred             cEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEec
Confidence            88877  46776666 677888875 7888777664

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.02  E-value=3.6e-08  Score=69.05  Aligned_cols=144  Identities=7%  Similarity=-0.040  Sum_probs=88.2

Q ss_pred             EEEecCCCceEEEeecccccceeeceeeeeeee--ccCCceEEEEe--cCcEEEEEec-CCeEEEEEcc--cccce----
Q psy16373          9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR--AHHQPITVLEC--VSNRVITGSQ-DHTLKVYKLE--DQQLL----   77 (166)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~--~~~~l~~~~~-d~~v~v~~~~--~~~~~----   77 (166)
                      ++++...++.+.+|+.....  ..  .....+.  .|...+..++|  +++++++++. ++.|.+|++.  +++..    
T Consensus       159 l~~~~~~~~~v~~~~~~~~g--~~--~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~  234 (365)
T 1jof_A          159 LYSADLTANKLWTHRKLASG--EV--ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHH  234 (365)
T ss_dssp             EEEEETTTTEEEEEEECTTS--CE--EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred             EEEEcCCCCEEEEEEECCCC--CE--EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccc
Confidence            33344345567777764211  11  1111222  23456788888  7778877764 7899999875  44432    


Q ss_pred             --ehhcC----CCC------ceEEEE-EcCCCCEEEEecCCC------cEEEEeCc-CCeeeE---EeecccccEEEEEE
Q psy16373         78 --FTLHG----HCG------PITTLF-IDGVSMMSGSGSQDG------LLCVWDTV-TGACMY---SIQAHDGCIHALTY  134 (166)
Q Consensus        78 --~~~~~----~~~------~v~~~~-~~~~~~~~~~~~~d~------~v~~~d~~-~~~~~~---~~~~~~~~v~~i~~  134 (166)
                        ..+..    |..      .+..++ |+|+++++++++.+.      .|.+|++. +++...   ....+...+..++|
T Consensus       235 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~  314 (365)
T 1jof_A          235 SFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAV  314 (365)
T ss_dssp             EEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCE
T ss_pred             eEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCccccee
Confidence              12221    122      478999 999999887765432      89999986 565433   13233444556778


Q ss_pred             cC-----CeEEEeec-CCcEEEEECCcc
Q psy16373        135 SD-----SYVISLGQ-DERLCVWDRFQG  156 (166)
Q Consensus       135 ~~-----~~l~~~~~-d~~i~~wd~~~~  156 (166)
                      +|     ++|++++. ++.|.+|++...
T Consensus       315 sp~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          315 SPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             EECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             cCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence            76     37888776 489999998654

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.01  E-value=1.2e-09  Score=83.31  Aligned_cols=110  Identities=9%  Similarity=-0.039  Sum_probs=84.5

Q ss_pred             ceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCc-----eEEEEEcCCCCEEEEecCC---------CcEE
Q psy16373         46 PITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP-----ITTLFIDGVSMMSGSGSQD---------GLLC  109 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~~~~~d---------~~v~  109 (166)
                      ...++.|  ++.+++++  |+.|++||+.+++....+.+|...     ...+.|+|+++.++.++.+         +.+.
T Consensus        18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~   95 (740)
T 4a5s_A           18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD   95 (740)
T ss_dssp             CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred             cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence            3457788  66777775  999999999998876666655432     2458899999999988775         5677


Q ss_pred             EEeCcCCeeeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCcccce
Q psy16373        110 VWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus       110 ~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      +||+.+++.. .+..+...+...+|+|+  .|+.+ .|+.|++||+.+++..
T Consensus        96 ~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~  145 (740)
T 4a5s_A           96 IYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSY  145 (740)
T ss_dssp             EEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCE
T ss_pred             EEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceE
Confidence            9999998754 35666778999999994  66666 5789999999877643

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.01  E-value=4.4e-08  Score=67.78  Aligned_cols=118  Identities=9%  Similarity=0.013  Sum_probs=88.6

Q ss_pred             ceEEEEecCc-EEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec
Q psy16373         46 PITVLECVSN-RVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA  124 (166)
Q Consensus        46 ~i~~~~~~~~-~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~  124 (166)
                      ....+.++++ ..++...++.|.+||..+++.+.++. .......+++++++..+++...++.|.+||..+++....+..
T Consensus        45 ~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~  123 (328)
T 3dsm_A           45 VAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIEC  123 (328)
T ss_dssp             CEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEEC
T ss_pred             cceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEc
Confidence            3567777444 45555567999999999999888775 345688999988886666655889999999999988777654


Q ss_pred             cc-----ccEEEEEEcCCeEEEee--cCCcEEEEECCcccceeeeee
Q psy16373        125 HD-----GCIHALTYSDSYVISLG--QDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       125 ~~-----~~v~~i~~~~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ..     .....+++..+.++.+.  .++.|.++|+.+++.+.++..
T Consensus       124 g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~  170 (328)
T 3dsm_A          124 PDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTI  170 (328)
T ss_dssp             TTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEEC
T ss_pred             CCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc
Confidence            33     13445666667777666  488999999999988877764

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=98.99  E-value=9.7e-09  Score=77.13  Aligned_cols=115  Identities=16%  Similarity=0.066  Sum_probs=79.2

Q ss_pred             ccCCceEEEEe--cCcEEEEEecC--------CeEEEEEcc-cc---cceehhcCCCCceEEEEEcCCCCEEEEecCCC-
Q psy16373         42 AHHQPITVLEC--VSNRVITGSQD--------HTLKVYKLE-DQ---QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDG-  106 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~~~~d--------~~v~v~~~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~-  106 (166)
                      .+...+..++|  +++.|+.++.+        ..|.+||+. ++   +.......+...+..+.|+|+++.+++++.++ 
T Consensus       185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~  264 (662)
T 3azo_A          185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGW  264 (662)
T ss_dssp             SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSS
T ss_pred             cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCC
Confidence            34456667777  88899887755        379999998 46   33333344567899999999999888888888 


Q ss_pred             -cEEEEeCcCCeeeEEeeccccc--------EEEEEEcC--CeEEEeecCCcEEEE--ECCccc
Q psy16373        107 -LLCVWDTVTGACMYSIQAHDGC--------IHALTYSD--SYVISLGQDERLCVW--DRFQGH  157 (166)
Q Consensus       107 -~v~~~d~~~~~~~~~~~~~~~~--------v~~i~~~~--~~l~~~~~d~~i~~w--d~~~~~  157 (166)
                       .+.+||+.+++.......+...        +..++|++  ..++++.. +.+++|  |..+++
T Consensus       265 ~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~  327 (662)
T 3azo_A          265 WNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE  327 (662)
T ss_dssp             CEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred             eEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc
Confidence             6667777666644333332222        45688876  46777777 888888  554443

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=98.95  E-value=5.1e-09  Score=73.51  Aligned_cols=100  Identities=9%  Similarity=0.113  Sum_probs=79.0

Q ss_pred             cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec----------CCCcEEEEeCcCCeeeEEeecc------
Q psy16373         62 QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS----------QDGLLCVWDTVTGACMYSIQAH------  125 (166)
Q Consensus        62 ~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~d~~v~~~d~~~~~~~~~~~~~------  125 (166)
                      .|+.|.+||..+++.+..+..+..+  .++++|+++++.+++          .++.|.+||..+.+.+..+...      
T Consensus        29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~  106 (361)
T 2oiz_A           29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG  106 (361)
T ss_dssp             GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred             ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence            4789999999999888877766555  899999999888875          2568999999998888877532      


Q ss_pred             cccEEEEEEcC--CeEEEeec--CCcEEEEECCcccceee-ee
Q psy16373        126 DGCIHALTYSD--SYVISLGQ--DERLCVWDRFQGHLLST-IQ  163 (166)
Q Consensus       126 ~~~v~~i~~~~--~~l~~~~~--d~~i~~wd~~~~~~~~~-~~  163 (166)
                      ......++++|  .+++++..  ++.|.+||+.+++.+.+ +.
T Consensus       107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~  149 (361)
T 2oiz_A          107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA  149 (361)
T ss_dssp             CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG
T ss_pred             CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec
Confidence            23345788988  47887764  57899999999988776 44

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=98.94  E-value=4.2e-08  Score=68.86  Aligned_cols=111  Identities=14%  Similarity=-0.042  Sum_probs=80.9

Q ss_pred             EEe--cCcEEEEEec-CC--eEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec
Q psy16373         50 LEC--VSNRVITGSQ-DH--TLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA  124 (166)
Q Consensus        50 ~~~--~~~~l~~~~~-d~--~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~  124 (166)
                      .+|  +++.|+.++. ++  .|.+||+.+++......++...+....|+|+++.++.++.++.+++||+.+++....+..
T Consensus        41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~  120 (388)
T 3pe7_A           41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV  120 (388)
T ss_dssp             CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred             ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence            566  7888888877 66  488889988887666666655555678999999999999899999999999887666665


Q ss_pred             ccccEEEEEE--cCC--eEEE----------------------eecCCcEEEEECCccccee
Q psy16373        125 HDGCIHALTY--SDS--YVIS----------------------LGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus       125 ~~~~v~~i~~--~~~--~l~~----------------------~~~d~~i~~wd~~~~~~~~  160 (166)
                      +...+....|  +++  .++.                      ...+..|.+||+.+++...
T Consensus       121 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~  182 (388)
T 3pe7_A          121 PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV  182 (388)
T ss_dssp             CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE
T ss_pred             hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE
Confidence            5554443433  553  4432                      2234679999998886543

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=98.94  E-value=7.6e-08  Score=64.27  Aligned_cols=115  Identities=6%  Similarity=-0.018  Sum_probs=82.4

Q ss_pred             CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe
Q psy16373         45 QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI  122 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~  122 (166)
                      ..+.++++  +++++++...++.|.+||............+...+.++++++++..+++...++.|.+||..........
T Consensus       150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~  229 (270)
T 1rwi_B          150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLP  229 (270)
T ss_dssp             CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECC
T ss_pred             CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeec
Confidence            34567777  5666666666789999998876544333333366889999999988888888899999998655433222


Q ss_pred             ecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373        123 QAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus       123 ~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      ..+...+..+++++  ..+++...++.|++++....+.+
T Consensus       230 ~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~~  268 (270)
T 1rwi_B          230 FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHHH  268 (270)
T ss_dssp             CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGSC
T ss_pred             cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcccc
Confidence            22335678999987  35666667899999998877654

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=98.91  E-value=8.8e-07  Score=65.77  Aligned_cols=108  Identities=6%  Similarity=-0.066  Sum_probs=78.3

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcc--cccceehhc
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLE--DQQLLFTLH   81 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~--~~~~~~~~~   81 (166)
                      ....+++...++.+.+++....+       .+..+.. ...+..+.+  +++++++++.|+.|.+||+.  +.+.+.++.
T Consensus       166 ~~~~~V~~~~~~~V~viD~~t~~-------v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~  237 (567)
T 1qks_A          166 ENLFSVTLRDAGQIALIDGSTYE-------IKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK  237 (567)
T ss_dssp             GGEEEEEETTTTEEEEEETTTCC-------EEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred             CceEEEEeCCCCeEEEEECCCCe-------EEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe
Confidence            45677888888888888765433       1122221 223457777  88999999999999999995  777777766


Q ss_pred             CCCCceEEEEEc----CCCCEEEEecC-CCcEEEEeCcCCeeeEEe
Q psy16373         82 GHCGPITTLFID----GVSMMSGSGSQ-DGLLCVWDTVTGACMYSI  122 (166)
Q Consensus        82 ~~~~~v~~~~~~----~~~~~~~~~~~-d~~v~~~d~~~~~~~~~~  122 (166)
                      .. .....++++    |+++++++++. ++.+.++|..+.+.+..+
T Consensus       238 ~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i  282 (567)
T 1qks_A          238 IG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQ  282 (567)
T ss_dssp             CC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEE
T ss_pred             cC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEE
Confidence            43 345789999    69988777664 589999999888776654

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=98.90  E-value=3.4e-07  Score=63.05  Aligned_cols=119  Identities=8%  Similarity=-0.051  Sum_probs=83.7

Q ss_pred             eeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC----CcEEEEe
Q psy16373         39 STRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD----GLLCVWD  112 (166)
Q Consensus        39 ~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d----~~v~~~d  112 (166)
                      .+..+...+.+++|  ++++++++..++.|.+||..+++.......+...+.+++++|+++++++...+    +.|.+||
T Consensus        39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d  118 (333)
T 2dg1_A           39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAAT  118 (333)
T ss_dssp             EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred             EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEe
Confidence            44455566788999  66766777888999999998776554333456789999999999988877666    6899999


Q ss_pred             CcCCeeeEEee--cccccEEEEEEcC-CeEEEeec-------CCcEEEEECCccc
Q psy16373        113 TVTGACMYSIQ--AHDGCIHALTYSD-SYVISLGQ-------DERLCVWDRFQGH  157 (166)
Q Consensus       113 ~~~~~~~~~~~--~~~~~v~~i~~~~-~~l~~~~~-------d~~i~~wd~~~~~  157 (166)
                      ..++.....+.  .+...+..++++| +.++.++.       .+.|..+|..+++
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~  173 (333)
T 2dg1_A          119 ENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT  173 (333)
T ss_dssp             TTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC
T ss_pred             CCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE
Confidence            88776543332  2345688999998 34444443       2556667765444

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.89  E-value=1.1e-10  Score=82.14  Aligned_cols=143  Identities=11%  Similarity=0.044  Sum_probs=73.5

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG   85 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~   85 (166)
                      ..+++++.++.+..|+....+.       ...+..  .++.+..+  ++..+++++.|+.|+.||.++++.+..+..+..
T Consensus        10 ~~v~~gs~dg~v~a~d~~tG~~-------~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~   80 (369)
T 2hz6_A           10 TLLFVSTLDGSLHAVSKRTGSI-------KWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP   80 (369)
T ss_dssp             TEEEEEETTSEEEEEETTTCCE-------EEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH
T ss_pred             CEEEEEcCCCEEEEEECCCCCE-------EEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc
Confidence            4566677777787777654331       112222  23333333  555777778999999999998877655443211


Q ss_pred             c-eE-EEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEc--CCeEEEeecCCcEEEEECCcccceee
Q psy16373         86 P-IT-TLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYS--DSYVISLGQDERLCVWDRFQGHLLST  161 (166)
Q Consensus        86 ~-v~-~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~  161 (166)
                      . +. +..+. .+..+++++.++.+..||.++++.+..+..+..    ..++  .+.+++++.|+.|+.||.++|+.+.+
T Consensus        81 ~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~  155 (369)
T 2hz6_A           81 ELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSPSTSLLYLGRTEYTITMYDTKTRELRWN  155 (369)
T ss_dssp             HHHTTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCE
T ss_pred             cccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----ccccccCCEEEEEecCCEEEEEECCCCCEEEe
Confidence            1 10 00111 234567778899999999999998887765432    2233  36888899999999999999998877


Q ss_pred             eee
Q psy16373        162 IQL  164 (166)
Q Consensus       162 ~~~  164 (166)
                      ++.
T Consensus       156 ~~~  158 (369)
T 2hz6_A          156 ATY  158 (369)
T ss_dssp             EEE
T ss_pred             Eec
Confidence            653

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=98.88  E-value=6.6e-08  Score=67.84  Aligned_cols=107  Identities=17%  Similarity=0.059  Sum_probs=76.5

Q ss_pred             cCcEEEEEecCCeEEEEEcccccce--ehhcC------CC----CceEEEEEcCCCCEEEEecC-----------CCcEE
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLL--FTLHG------HC----GPITTLFIDGVSMMSGSGSQ-----------DGLLC  109 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~--~~~~~------~~----~~v~~~~~~~~~~~~~~~~~-----------d~~v~  109 (166)
                      ++..++..+.++.|.++|+......  ..+..      +.    .....++++|++..+..+..           +..+.
T Consensus       210 ~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~  289 (361)
T 2oiz_A          210 DKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIW  289 (361)
T ss_dssp             CSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEE
T ss_pred             cCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEE
Confidence            4566666778899999998654321  11100      00    11113688999766665432           34899


Q ss_pred             EEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcc--cceeee
Q psy16373        110 VWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQG--HLLSTI  162 (166)
Q Consensus       110 ~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~--~~~~~~  162 (166)
                      +||+++++.+..+..+.  +..++|+|  .++++++. +.|.+||..++  +.+.++
T Consensus       290 viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i  343 (361)
T 2oiz_A          290 VMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI  343 (361)
T ss_dssp             EEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE
T ss_pred             EEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe
Confidence            99999999999998776  88999998  47777776 99999999999  888776

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=98.87  E-value=2.2e-07  Score=65.21  Aligned_cols=115  Identities=10%  Similarity=-0.086  Sum_probs=79.5

Q ss_pred             ccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEE--EEcCCCCEEEEe---------------
Q psy16373         42 AHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTL--FIDGVSMMSGSG---------------  102 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~---------------  102 (166)
                      ++...+....|  +++.|+.++.++.+.+||+.+++....+..+...+...  .++|++..++..               
T Consensus        78 ~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~  157 (388)
T 3pe7_A           78 GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKK  157 (388)
T ss_dssp             SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHH
T ss_pred             CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccch
Confidence            44444434556  88999999999999999999887665555555544433  348888888632               


Q ss_pred             -------cCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-C--eEEEeec------CCcEEEEECCccc
Q psy16373        103 -------SQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-S--YVISLGQ------DERLCVWDRFQGH  157 (166)
Q Consensus       103 -------~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~--~l~~~~~------d~~i~~wd~~~~~  157 (166)
                             ..+..+.+||+.+++... +..+...+..+.|+| +  .|+.+..      ...|.++|...+.
T Consensus       158 ~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~  227 (388)
T 3pe7_A          158 FHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN  227 (388)
T ss_dssp             HHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC
T ss_pred             hhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc
Confidence                   244689999999886543 444566788999999 5  5555554      2378888876543

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=98.87  E-value=1.6e-07  Score=69.69  Aligned_cols=110  Identities=9%  Similarity=-0.057  Sum_probs=88.3

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc--CCeeeEEeecccccEE
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV--TGACMYSIQAHDGCIH  130 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~--~~~~~~~~~~~~~~v~  130 (166)
                      .+..+++...++.|.++|..+++.+..+.. ...+..+.++|+++++.+++.|+.|.+||+.  +.+.+..+.... ...
T Consensus       166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~  243 (567)
T 1qks_A          166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EAR  243 (567)
T ss_dssp             GGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEE
T ss_pred             CceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCc
Confidence            344566777889999999999988887763 3456799999999999999999999999996  778888776533 346


Q ss_pred             EEEEc----CC--eEEEeec-CCcEEEEECCcccceeeeee
Q psy16373        131 ALTYS----DS--YVISLGQ-DERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       131 ~i~~~----~~--~l~~~~~-d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .++|+    |+  ++++++. ++.+.++|..+.+.+..+.+
T Consensus       244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~  284 (567)
T 1qks_A          244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST  284 (567)
T ss_dssp             EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred             eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEec
Confidence            89999    43  6666665 68999999999999888764

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=98.85  E-value=3.8e-07  Score=63.06  Aligned_cols=110  Identities=9%  Similarity=-0.042  Sum_probs=82.0

Q ss_pred             eEEEEecCcEEEEEe--cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC----------CcEEEEeCc
Q psy16373         47 ITVLECVSNRVITGS--QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD----------GLLCVWDTV  114 (166)
Q Consensus        47 i~~~~~~~~~l~~~~--~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d----------~~v~~~d~~  114 (166)
                      ...+++++..++.+.  .++.|.++|..+++.+..+.. ......+.++|+++.++++..+          +.|.++|.+
T Consensus       133 p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~  211 (328)
T 3dsm_A          133 TEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE  211 (328)
T ss_dssp             CCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred             cceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC
Confidence            445666566666655  489999999999887776654 2345788899999988887655          789999999


Q ss_pred             CCeeeEEeecc-cccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373        115 TGACMYSIQAH-DGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus       115 ~~~~~~~~~~~-~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      +++....+... ......++++|  +.++++..  .|.+||..+++..
T Consensus       212 t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~  257 (328)
T 3dsm_A          212 TFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVP  257 (328)
T ss_dssp             TTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCC
T ss_pred             CCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCcee
Confidence            99877666532 23678999997  46666654  8999999887753

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=98.85  E-value=2.3e-06  Score=58.84  Aligned_cols=141  Identities=8%  Similarity=-0.091  Sum_probs=88.5

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecC----CeEEEEEcccccceehh
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQD----HTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d----~~v~v~~~~~~~~~~~~   80 (166)
                      +.+++++..++.+..|+......       ......+...+.++++  +++++++...+    +.|.+||..+++....+
T Consensus        56 g~l~~~~~~~~~i~~~d~~~~~~-------~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~  128 (333)
T 2dg1_A           56 GQLFLLDVFEGNIFKINPETKEI-------KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDII  128 (333)
T ss_dssp             SCEEEEETTTCEEEEECTTTCCE-------EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEE
T ss_pred             CCEEEEECCCCEEEEEeCCCCcE-------EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE
Confidence            34555666666666665433221       1111134567899999  56666666555    68999999876543222


Q ss_pred             c--CCCCceEEEEEcCCCCEEEEecC------CCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEe-ecCCcEE
Q psy16373         81 H--GHCGPITTLFIDGVSMMSGSGSQ------DGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISL-GQDERLC  149 (166)
Q Consensus        81 ~--~~~~~v~~~~~~~~~~~~~~~~~------d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~-~~d~~i~  149 (166)
                      .  .+...+.+++++|+++.+++...      .+.+..+|..+++... +......+..++|+|+  .++.+ ..++.|.
T Consensus       129 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~  207 (333)
T 2dg1_A          129 EDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLH  207 (333)
T ss_dssp             CSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEE
T ss_pred             ccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEE
Confidence            2  23457899999999988887654      3566667765544332 2223345788999984  45444 4578999


Q ss_pred             EEECCc
Q psy16373        150 VWDRFQ  155 (166)
Q Consensus       150 ~wd~~~  155 (166)
                      +||..+
T Consensus       208 ~~d~~~  213 (333)
T 2dg1_A          208 RIALED  213 (333)
T ss_dssp             EEEECT
T ss_pred             EEEecC
Confidence            999864

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=98.83  E-value=6.4e-08  Score=73.37  Aligned_cols=114  Identities=7%  Similarity=-0.128  Sum_probs=79.9

Q ss_pred             ccCCceEEEEe--cCcEEE-----EEecCCeEEEEEcccccceehhcCCCCce--EEEEEcCCCCEEEEecCCCc-----
Q psy16373         42 AHHQPITVLEC--VSNRVI-----TGSQDHTLKVYKLEDQQLLFTLHGHCGPI--TTLFIDGVSMMSGSGSQDGL-----  107 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~-----~~~~d~~v~v~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~~d~~-----  107 (166)
                      +|...+..++|  ++++|+     .|+.+..|++||+.+++.+..  .+...+  ..++|+|+++.++.++.|..     
T Consensus       118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~  195 (695)
T 2bkl_A          118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV--DVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV  195 (695)
T ss_dssp             SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS--CCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred             CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC--cccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence            45557888888  888888     344457899999999876511  122222  68999999999998888766     


Q ss_pred             --------EEEEeCcCCe----eeEEeecccccEEEEEEcCC--eEEEeecCC----cEEEEECCccc
Q psy16373        108 --------LCVWDTVTGA----CMYSIQAHDGCIHALTYSDS--YVISLGQDE----RLCVWDRFQGH  157 (166)
Q Consensus       108 --------v~~~d~~~~~----~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~----~i~~wd~~~~~  157 (166)
                              |++|++.++.    .+.....+...+..+.|+|+  +|+..+.++    .|.+|+..+++
T Consensus       196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~  263 (695)
T 2bkl_A          196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD  263 (695)
T ss_dssp             GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS
T ss_pred             ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc
Confidence                    9999998775    33333345567889999994  666666554    67777665443

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.82  E-value=6.2e-10  Score=78.37  Aligned_cols=110  Identities=13%  Similarity=0.096  Sum_probs=65.5

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccc-cEE-
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDG-CIH-  130 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~-~v~-  130 (166)
                      .++.+++++.|+.|..||..+++.+..+..  ..+.+..+..++..+++++.|+.++.||.++++.+..+..+.. .+. 
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~   85 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA   85 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence            688899999999999999999998877765  3444444445677788888999999999999987766654321 111 


Q ss_pred             EEEE-cCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        131 ALTY-SDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       131 ~i~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ...+ ..+.+++++.|+.|+.||.++|+.+.++..
T Consensus        86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~  120 (369)
T 2hz6_A           86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSS  120 (369)
T ss_dssp             CSCC-----CCCCEEEEEEEEECCC----------
T ss_pred             CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecC
Confidence            1111 335788888999999999999998877654

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=98.82  E-value=1.2e-07  Score=71.96  Aligned_cols=112  Identities=13%  Similarity=-0.015  Sum_probs=80.0

Q ss_pred             cCCceEEEEe--cCcEEEEEecCC-----eEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCc--------
Q psy16373         43 HHQPITVLEC--VSNRVITGSQDH-----TLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGL--------  107 (166)
Q Consensus        43 ~~~~i~~~~~--~~~~l~~~~~d~-----~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~--------  107 (166)
                      |...+..++|  ++++|+.+..++     .|++||+.+++....... ...+..++|+|+++.++.++.++.        
T Consensus       123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~  201 (710)
T 2xdw_A          123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE  201 (710)
T ss_dssp             SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred             CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc-CcccceEEEEeCCCEEEEEEECCccccccccc
Confidence            4446778888  888888765543     899999999877653222 223678999999999988877765        


Q ss_pred             --------EEEEeCcCCee----eEEeecccccEEEEEEcCC--eEEEeec-----CCcEEEEECCc
Q psy16373        108 --------LCVWDTVTGAC----MYSIQAHDGCIHALTYSDS--YVISLGQ-----DERLCVWDRFQ  155 (166)
Q Consensus       108 --------v~~~d~~~~~~----~~~~~~~~~~v~~i~~~~~--~l~~~~~-----d~~i~~wd~~~  155 (166)
                              |++|++.++..    +.....+...+..+.|+|+  +|+..+.     +..|.+||+.+
T Consensus       202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~  268 (710)
T 2xdw_A          202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ  268 (710)
T ss_dssp             CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred             cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence                    99999987752    2222224455788999984  5655554     57899999976

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=98.82  E-value=2.6e-07  Score=62.75  Aligned_cols=115  Identities=10%  Similarity=-0.047  Sum_probs=76.8

Q ss_pred             ceEEEEe--cCcEEEE----Ee-------------cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCC
Q psy16373         46 PITVLEC--VSNRVIT----GS-------------QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDG  106 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~----~~-------------~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~  106 (166)
                      .+..+++  +++++++    |.             ..+.|..++.. ++ ...+..+......++++|+++.+++.+.++
T Consensus       116 ~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~  193 (296)
T 3e5z_A          116 SPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDN  193 (296)
T ss_dssp             CCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTT
T ss_pred             CCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCC
Confidence            4566777  6777776    32             13455555554 33 333444566778999999999887778889


Q ss_pred             cEEEEeCc-CCee---eEEeecccccEEEEEEcC-CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        107 LLCVWDTV-TGAC---MYSIQAHDGCIHALTYSD-SYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       107 ~v~~~d~~-~~~~---~~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .|.+||+. +++.   ...+..+...+..+++++ ..++.++ ++.|.+||.. ++.+..+..
T Consensus       194 ~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~~~~  254 (296)
T 3e5z_A          194 ATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELGRVLT  254 (296)
T ss_dssp             EEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEEEEEC
T ss_pred             eEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEEEEEC
Confidence            99999986 4443   223333344566789987 4566666 8899999986 777666654

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=98.78  E-value=1e-06  Score=58.71  Aligned_cols=113  Identities=3%  Similarity=-0.089  Sum_probs=78.4

Q ss_pred             CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe
Q psy16373         45 QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI  122 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~  122 (166)
                      ..+.++++  +++++++...++.|.+|+..+.............+.+++++++++.+++...++.|.+||..........
T Consensus       108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~  187 (270)
T 1rwi_B          108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLP  187 (270)
T ss_dssp             SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECC
T ss_pred             CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeec
Confidence            45788888  5666666667889999976654433222223345788999999998888777889999998766544332


Q ss_pred             ecccccEEEEEEcCC-eEEEee-cCCcEEEEECCccc
Q psy16373        123 QAHDGCIHALTYSDS-YVISLG-QDERLCVWDRFQGH  157 (166)
Q Consensus       123 ~~~~~~v~~i~~~~~-~l~~~~-~d~~i~~wd~~~~~  157 (166)
                      ..+...+..++++++ .++.+. .++.|..||.....
T Consensus       188 ~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~  224 (270)
T 1rwi_B          188 FTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT  224 (270)
T ss_dssp             CSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred             ccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence            333356788999884 555554 57789999986543

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=98.75  E-value=7.8e-07  Score=67.48  Aligned_cols=138  Identities=8%  Similarity=-0.062  Sum_probs=87.4

Q ss_pred             ecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCe-------------EEEEEccccc-
Q psy16373         12 TGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHT-------------LKVYKLEDQQ-   75 (166)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~-------------v~v~~~~~~~-   75 (166)
                      .|+.+..+++|+....+...     ...+...  ....++|  +++.|+.++.+..             |++|++.++. 
T Consensus       142 ~G~~~~~i~v~dl~tg~~~~-----~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~  214 (695)
T 2bkl_A          142 NAADEAVLHVIDVDSGEWSK-----VDVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPS  214 (695)
T ss_dssp             TTCSCCEEEEEETTTCCBCS-----SCCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGG
T ss_pred             CCCceEEEEEEECCCCCCcC-----CcccCcc--cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCch
Confidence            55555678888875543210     0011111  1156778  7888998888765             9999998765 


Q ss_pred             ---ceehhcCCCCceEEEEEcCCCCEEEEecCCC----cEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeec----
Q psy16373         76 ---LLFTLHGHCGPITTLFIDGVSMMSGSGSQDG----LLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQ----  144 (166)
Q Consensus        76 ---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~----~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~----  144 (166)
                         .+.....+...+..+.++|+|++++..+.++    .+++++..+++ ...+..+...+....+.++.++..+.    
T Consensus       215 ~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~  293 (695)
T 2bkl_A          215 KDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHAWKDRFYVLTDEGAP  293 (695)
T ss_dssp             GCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEEETTEEEEEECTTCT
T ss_pred             hceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEecCCcEEEEECCCCC
Confidence               3333334556788999999999888776655    67777765554 34444455555555565532544443    


Q ss_pred             CCcEEEEECCccc
Q psy16373        145 DERLCVWDRFQGH  157 (166)
Q Consensus       145 d~~i~~wd~~~~~  157 (166)
                      ++.|.+||+.+++
T Consensus       294 ~~~l~~~d~~~~~  306 (695)
T 2bkl_A          294 RQRVFEVDPAKPA  306 (695)
T ss_dssp             TCEEEEEBTTBCS
T ss_pred             CCEEEEEeCCCCC
Confidence            5789999998765

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.73  E-value=2.7e-06  Score=59.65  Aligned_cols=114  Identities=12%  Similarity=0.137  Sum_probs=80.5

Q ss_pred             EEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeeccccc
Q psy16373         49 VLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGC  128 (166)
Q Consensus        49 ~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~  128 (166)
                      .+...+..++.++.++.|..+|.++++.+................  +..++.++.++.+..+|.++++.+.........
T Consensus        98 ~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~  175 (376)
T 3q7m_A           98 GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPS  175 (376)
T ss_dssp             EEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC--
T ss_pred             CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCc
Confidence            334478888889999999999999998876655332221122222  346777788999999999999988777543221


Q ss_pred             E-----EEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        129 I-----HALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       129 v-----~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .     .......+.++.++.++.|..+|.++++.+.+...
T Consensus       176 ~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~  216 (376)
T 3q7m_A          176 LSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRI  216 (376)
T ss_dssp             ---CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEEC
T ss_pred             eeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEec
Confidence            1     22233357888888899999999999998877653

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.73  E-value=1.7e-07  Score=66.13  Aligned_cols=111  Identities=14%  Similarity=0.053  Sum_probs=86.3

Q ss_pred             cCcEEEEEec-----CCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec----------CCCcEEEEeCcCCe
Q psy16373         53 VSNRVITGSQ-----DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS----------QDGLLCVWDTVTGA  117 (166)
Q Consensus        53 ~~~~l~~~~~-----d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~d~~v~~~d~~~~~  117 (166)
                      +++.++....     ++.|.+.|..+++.+.++.....+ . +.++|+++.+..++          .++.|.+||..+.+
T Consensus        43 d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~  120 (386)
T 3sjl_D           43 DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL  120 (386)
T ss_dssp             CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred             CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe
Confidence            6666666654     679999999999998888765555 4 99999998877665          35789999999999


Q ss_pred             eeEEeeccc-------ccEEEEEEcC--CeEEEeec--CCcEEEEECCcccceeeeeec
Q psy16373        118 CMYSIQAHD-------GCIHALTYSD--SYVISLGQ--DERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       118 ~~~~~~~~~-------~~v~~i~~~~--~~l~~~~~--d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      .+..+....       .....++|+|  .+++.+..  ++.|.++|+.+++.+.++.++
T Consensus       121 v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~  179 (386)
T 3sjl_D          121 PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP  179 (386)
T ss_dssp             EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred             EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC
Confidence            888875321       1334688888  47777764  689999999999999988764

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.70  E-value=4.7e-06  Score=55.70  Aligned_cols=116  Identities=16%  Similarity=0.087  Sum_probs=87.0

Q ss_pred             eEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc
Q psy16373         47 ITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH  125 (166)
Q Consensus        47 i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~  125 (166)
                      ...+.+ .+.+..+.+.++.|+++|+++++.+..+......-..+++..+ ..+.....++.+.++|.++.+.+.++...
T Consensus        57 tqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~  135 (268)
T 3nok_A           57 TQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQRERTTRYS  135 (268)
T ss_dssp             EEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSS-CEEEEESSSCEEEEEETTTTEEEEEEECS
T ss_pred             cceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCC-EEEEEEccCCEEEEEECCcCcEEEEEeCC
Confidence            468888 5555667777889999999999888776222222244666543 45555667899999999999999998753


Q ss_pred             cccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        126 DGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       126 ~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .. -+.+++....|+.+..++.|.++|..+.+.+.++++
T Consensus       136 ~e-GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V  173 (268)
T 3nok_A          136 GE-GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV  173 (268)
T ss_dssp             SC-CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred             Cc-eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence            33 356777777888887899999999999999888875

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=98.69  E-value=1.4e-06  Score=60.23  Aligned_cols=109  Identities=12%  Similarity=0.087  Sum_probs=75.0

Q ss_pred             eEEEEecCcEEEEEe---------cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC---C--cEEEEe
Q psy16373         47 ITVLECVSNRVITGS---------QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD---G--LLCVWD  112 (166)
Q Consensus        47 i~~~~~~~~~l~~~~---------~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d---~--~v~~~d  112 (166)
                      +....++++.++...         .++.|.+||+.+++.. .+    ..+..+.|+|+++.++..+.+   +  .+.+||
T Consensus        17 ~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~   91 (347)
T 2gop_A           17 LSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVAD   91 (347)
T ss_dssp             EEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEE
T ss_pred             cccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEE
Confidence            344444677666542         3678999999877643 22    467889999999988877643   3  488889


Q ss_pred             CcCCeeeEEeecccccEEEEEEcCC--eEEEeecC---------------------------CcEEEEECCcccceeee
Q psy16373        113 TVTGACMYSIQAHDGCIHALTYSDS--YVISLGQD---------------------------ERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       113 ~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d---------------------------~~i~~wd~~~~~~~~~~  162 (166)
                      +.+++....... .. +..+.|+|+  .|+.++.+                           ..|.+||+.+++.+..+
T Consensus        92 ~~~g~~~~l~~~-~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l  168 (347)
T 2gop_A           92 LETLSSKKILEA-KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF  168 (347)
T ss_dssp             TTTTEEEEEEEE-SE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEE
T ss_pred             CCCCceEEEEcC-CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeee
Confidence            888776554443 34 899999983  66666532                           56999999887763433

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=98.66  E-value=1.5e-06  Score=59.98  Aligned_cols=97  Identities=11%  Similarity=0.048  Sum_probs=67.9

Q ss_pred             CceEEEEe--cCcEEEEEecC---C--eEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC------------
Q psy16373         45 QPITVLEC--VSNRVITGSQD---H--TLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD------------  105 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~~d---~--~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d------------  105 (166)
                      ..+..+.|  +++.|+..+.+   +  .|.+|++.+++........ . +..+.|+|+++.++.++.+            
T Consensus        59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~  136 (347)
T 2gop_A           59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD  136 (347)
T ss_dssp             ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred             ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence            34667788  78888877654   3  4777888877654433333 3 8999999999988877532            


Q ss_pred             ---------------CcEEEEeCcCCeeeEEeecccccEEEEEEcCC-eEEEeecC
Q psy16373        106 ---------------GLLCVWDTVTGACMYSIQAHDGCIHALTYSDS-YVISLGQD  145 (166)
Q Consensus       106 ---------------~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~-~l~~~~~d  145 (166)
                                     ..+.+||+.+++.+..+.. . .+..+.|+|+ .++++..+
T Consensus       137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~  190 (347)
T 2gop_A          137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHR  190 (347)
T ss_dssp             CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTEEEEEEECC
T ss_pred             cceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCeEEEEEecc
Confidence                           5788999988877455554 3 7788999996 45555443

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=98.66  E-value=1.3e-05  Score=54.01  Aligned_cols=114  Identities=7%  Similarity=-0.046  Sum_probs=76.8

Q ss_pred             cCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373         43 HHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY  120 (166)
Q Consensus        43 ~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~  120 (166)
                      +...+.++++  ++.+.++...++.|..|+.........+......+.++++.+++..+++...++.+..||. +++...
T Consensus        55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~  133 (299)
T 2z2n_A           55 PDAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE  133 (299)
T ss_dssp             TTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE
T ss_pred             ccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE
Confidence            3456888888  5666666556789999998622111112224457899999999998888777889999998 554332


Q ss_pred             E-eecccccEEEEEEcC-CeEEEee-cCCcEEEEECCcccc
Q psy16373        121 S-IQAHDGCIHALTYSD-SYVISLG-QDERLCVWDRFQGHL  158 (166)
Q Consensus       121 ~-~~~~~~~v~~i~~~~-~~l~~~~-~d~~i~~wd~~~~~~  158 (166)
                      . .......+..+++++ +.++.+. .++.|..||. +++.
T Consensus       134 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~  173 (299)
T 2z2n_A          134 YELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI  173 (299)
T ss_dssp             EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred             ecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE
Confidence            2 222345678899987 3454444 4678999998 5554

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=98.61  E-value=4e-06  Score=56.84  Aligned_cols=113  Identities=12%  Similarity=0.058  Sum_probs=80.6

Q ss_pred             ccCCceEEEEe--cCcEEEEEecCCeEEEEEcc-cccc---eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC
Q psy16373         42 AHHQPITVLEC--VSNRVITGSQDHTLKVYKLE-DQQL---LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT  115 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~-~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~  115 (166)
                      .+......++|  +++.+++.+.++.|.+|++. +++.   ...+..+...+.+++++++++.+++.  ++.|.+||.. 
T Consensus       169 ~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-  245 (296)
T 3e5z_A          169 RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-  245 (296)
T ss_dssp             CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-
T ss_pred             cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-
Confidence            44455678888  67777777778999999996 4433   22223344556789999999987776  7889999986 


Q ss_pred             CeeeEEeecccccEEEEEEc-CC--eEEEeecCCcEEEEECCcccce
Q psy16373        116 GACMYSIQAHDGCIHALTYS-DS--YVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus       116 ~~~~~~~~~~~~~v~~i~~~-~~--~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      ++.+..+..+.. +++++|. ++  .|+.++.+ .+.-++.++.+..
T Consensus       246 g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~~  290 (296)
T 3e5z_A          246 GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGLE  290 (296)
T ss_dssp             SCEEEEEECSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBCC
T ss_pred             CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEccccccc
Confidence            777777776666 8899994 53  67777765 4556676665543

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=98.61  E-value=5.9e-06  Score=62.83  Aligned_cols=110  Identities=8%  Similarity=-0.110  Sum_probs=75.5

Q ss_pred             eEEEEe--cCcEEEEEecCCe----------------EEEEEcccccc----eehhcCCCCceEEEEEcCCCCEEEEecC
Q psy16373         47 ITVLEC--VSNRVITGSQDHT----------------LKVYKLEDQQL----LFTLHGHCGPITTLFIDGVSMMSGSGSQ  104 (166)
Q Consensus        47 i~~~~~--~~~~l~~~~~d~~----------------v~v~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~  104 (166)
                      +..++|  +++.|+.++.++.                |.+|++.+++.    +.....+...+..+.++|++++++..+.
T Consensus       173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~  252 (710)
T 2xdw_A          173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR  252 (710)
T ss_dssp             SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred             cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence            556788  7888988887765                99999987653    2222234555789999999998887654


Q ss_pred             -----CCcEEEEeCcC------Ce-eeEEeecccccEEEEEEcC--CeEEEeecC----CcEEEEECCccc
Q psy16373        105 -----DGLLCVWDTVT------GA-CMYSIQAHDGCIHALTYSD--SYVISLGQD----ERLCVWDRFQGH  157 (166)
Q Consensus       105 -----d~~v~~~d~~~------~~-~~~~~~~~~~~v~~i~~~~--~~l~~~~~d----~~i~~wd~~~~~  157 (166)
                           +..+++||+.+      +. ....+..+...+.. .|++  +.++..+.+    ..|.+||+.++.
T Consensus       253 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~  322 (710)
T 2xdw_A          253 EGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPE  322 (710)
T ss_dssp             CSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred             ccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence                 56899999986      43 35556655555544 3554  555554442    369999998764

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.58  E-value=9.6e-06  Score=54.15  Aligned_cols=127  Identities=16%  Similarity=0.030  Sum_probs=88.9

Q ss_pred             eeeeeeeccCCc--eEEEEe-cCcEEEEEecCC--eEEEEEcccccceehhcCCCC-ceEEEEEcCCCCEEEEecCCCcE
Q psy16373         35 CKVESTRAHHQP--ITVLEC-VSNRVITGSQDH--TLKVYKLEDQQLLFTLHGHCG-PITTLFIDGVSMMSGSGSQDGLL  108 (166)
Q Consensus        35 ~~~~~~~~~~~~--i~~~~~-~~~~l~~~~~d~--~v~v~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~d~~v  108 (166)
                      ..+.++ .|...  ...+.| ++.++.+.+.+|  .|+++|+++++.+..+..... .--.++... ...+.....++.+
T Consensus        32 ~vv~~~-phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g-~~ly~ltw~~~~v  109 (262)
T 3nol_A           32 QIVHSY-PHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWK-DKIVGLTWKNGLG  109 (262)
T ss_dssp             EEEEEE-ECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEE
T ss_pred             EEEEEe-cCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeC-CEEEEEEeeCCEE
Confidence            344444 34333  467888 555566666665  999999999998877654322 123455543 3444555678899


Q ss_pred             EEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        109 CVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       109 ~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .++|.++.+.+.++.... .-+.+++..+.|+.+..++.|.++|..+.+.+.++++
T Consensus       110 ~v~D~~t~~~~~ti~~~~-eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V  164 (262)
T 3nol_A          110 FVWNIRNLRQVRSFNYDG-EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV  164 (262)
T ss_dssp             EEEETTTCCEEEEEECSS-CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred             EEEECccCcEEEEEECCC-CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence            999999999999887533 2246667777777777788899999999998888765

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.56  E-value=2.5e-05  Score=51.68  Aligned_cols=117  Identities=12%  Similarity=-0.058  Sum_probs=85.4

Q ss_pred             ceEEEEecCcE-EEEEecC--CeEEEEEcccccceehhcCCCC-ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373         46 PITVLECVSNR-VITGSQD--HTLKVYKLEDQQLLFTLHGHCG-PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS  121 (166)
Q Consensus        46 ~i~~~~~~~~~-l~~~~~d--~~v~v~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~  121 (166)
                      -...+.|+++. ..+.+.+  ..|+.+|+++++.+..+..... .-..+++.. +..+.....++.+.++|.++.+.+.+
T Consensus        22 ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~tl~~~~t  100 (243)
T 3mbr_X           22 FTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLATLTPRAR  100 (243)
T ss_dssp             CEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTTTEEEEE
T ss_pred             ccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEEEECCcCcEEEE
Confidence            45688884454 4455554  4999999999998877653322 223445543 44555567789999999999999999


Q ss_pred             eecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        122 IQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       122 ~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      +..... -+.++.....|+.+..++.|.++|..+.+.+.++++
T Consensus       101 i~~~~~-Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V  142 (243)
T 3mbr_X          101 FRYPGE-GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV  142 (243)
T ss_dssp             EECSSC-CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred             EeCCCC-ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence            875433 356777777777777889999999999999888875

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.55  E-value=3.7e-06  Score=59.33  Aligned_cols=109  Identities=11%  Similarity=-0.018  Sum_probs=80.4

Q ss_pred             cCcEEEEEec--CC---eEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec----------CCCcEEEEeCcCCe
Q psy16373         53 VSNRVITGSQ--DH---TLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS----------QDGLLCVWDTVTGA  117 (166)
Q Consensus        53 ~~~~l~~~~~--d~---~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~d~~v~~~d~~~~~  117 (166)
                      ++..++....  ..   .|.++|..+++.+..+.....+  .+.++|+++.+..+.          .++.+.++|..+.+
T Consensus        31 ~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~  108 (373)
T 2mad_H           31 DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL  108 (373)
T ss_pred             CCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc
Confidence            5565555543  22   8899999999888777654444  999999999888875          36789999999888


Q ss_pred             eeEEeecc-------cccEEEEEEcC--CeEEEeec--CCcEEEEECCcccceee-eee
Q psy16373        118 CMYSIQAH-------DGCIHALTYSD--SYVISLGQ--DERLCVWDRFQGHLLST-IQL  164 (166)
Q Consensus       118 ~~~~~~~~-------~~~v~~i~~~~--~~l~~~~~--d~~i~~wd~~~~~~~~~-~~~  164 (166)
                      .+..+...       ......++|+|  .+++.++.  ++.|.++| .+++.+.+ +..
T Consensus       109 ~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~  166 (373)
T 2mad_H          109 PIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS  166 (373)
T ss_pred             EEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC
Confidence            87766432       12234788998  47777764  47899999 99988877 654

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=98.54  E-value=3.2e-05  Score=51.98  Aligned_cols=111  Identities=3%  Similarity=-0.101  Sum_probs=75.1

Q ss_pred             cCCceEEEEe--cCcEEEEEecCCeEEEEEccccccee-hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeee
Q psy16373         43 HHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF-TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACM  119 (166)
Q Consensus        43 ~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~  119 (166)
                      ....+.++++  ++.+.++...++.|.+||. +++... ....+...+.+++++++++.+++...++.|..||. +++ +
T Consensus       181 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~  257 (299)
T 2z2n_A          181 PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNI-I  257 (299)
T ss_dssp             TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTE-E
T ss_pred             CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCc-e
Confidence            3455778888  5666555556789999999 555332 12234567899999999998887767889999998 454 2


Q ss_pred             EEe--ecccccEEEEEEcC-CeEEEeecCCcEEEEECCccc
Q psy16373        120 YSI--QAHDGCIHALTYSD-SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       120 ~~~--~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      ..+  ..+...+.++++ + +.++.++..+.|..++.++++
T Consensus       258 ~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~~  297 (299)
T 2z2n_A          258 EEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKDN  297 (299)
T ss_dssp             EEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC---
T ss_pred             EEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCccc
Confidence            333  233456788888 6 566666656778888876653

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.52  E-value=3.3e-06  Score=59.22  Aligned_cols=110  Identities=14%  Similarity=0.179  Sum_probs=80.5

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCC---------CCceE-EEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH---------CGPIT-TLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI  122 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~---------~~~v~-~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~  122 (166)
                      .++.++.++.++.|..+|.++++.+......         ...+. ....  .+..+..++.++.+..+|.++++.+...
T Consensus        52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~~W~~  129 (376)
T 3q7m_A           52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTVAWQT  129 (376)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence            6788888888999999999999887655432         12232 2333  3456667788999999999999988776


Q ss_pred             ecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        123 QAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       123 ~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ..............+.++.++.++.|..+|.++|+.+.++..
T Consensus       130 ~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~  171 (376)
T 3q7m_A          130 KVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNL  171 (376)
T ss_dssp             ECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             eCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeC
Confidence            644332222334467888899999999999999998887764

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=98.48  E-value=3.2e-05  Score=52.51  Aligned_cols=110  Identities=9%  Similarity=0.073  Sum_probs=77.5

Q ss_pred             ceEEEEec------CcEEEEE-ecCCeEEEEEcc-ccc-----ceehhcCCC-CceEEEEEcCCCCEEEEecCCCcEEEE
Q psy16373         46 PITVLECV------SNRVITG-SQDHTLKVYKLE-DQQ-----LLFTLHGHC-GPITTLFIDGVSMMSGSGSQDGLLCVW  111 (166)
Q Consensus        46 ~i~~~~~~------~~~l~~~-~~d~~v~v~~~~-~~~-----~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~d~~v~~~  111 (166)
                      ....++++      ++.++.+ ..++.|.+|+.. +++     ....+..+. ..+..++++++++.+++...++.|.+|
T Consensus       173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~  252 (314)
T 1pjx_A          173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF  252 (314)
T ss_dssp             SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred             CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEE
Confidence            34555554      3345544 467899999986 333     222333343 567889999999998888788899999


Q ss_pred             eCcCCeeeEEeecccccEEEEEEcC--CeEEEee-cCCcEEEEECCc
Q psy16373        112 DTVTGACMYSIQAHDGCIHALTYSD--SYVISLG-QDERLCVWDRFQ  155 (166)
Q Consensus       112 d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~~  155 (166)
                      |.++++.+..+..+...+.+++|++  +.|+.++ .++.|..|++..
T Consensus       253 d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          253 GPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             CTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             cCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            9987777666666667789999987  3355554 467899999865

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=98.48  E-value=7.7e-05  Score=50.14  Aligned_cols=113  Identities=7%  Similarity=-0.026  Sum_probs=76.6

Q ss_pred             cCCceEEEEe--cCcEEEEEecCCeEEEEEcccccce-ehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeee
Q psy16373         43 HHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL-FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACM  119 (166)
Q Consensus        43 ~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~  119 (166)
                      ....+.++++  ++++.++...++.|..+|.. ++.. ..+......+.++++.+++..+++...++.+..+|.. ++..
T Consensus        60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~  137 (300)
T 2qc5_A           60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY  137 (300)
T ss_dssp             TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE
T ss_pred             CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE
Confidence            3456788888  55666655557889999987 5432 1222234668999999999988887778899999987 5443


Q ss_pred             E-EeecccccEEEEEEcC-CeEEEee-cCCcEEEEECCcccc
Q psy16373        120 Y-SIQAHDGCIHALTYSD-SYVISLG-QDERLCVWDRFQGHL  158 (166)
Q Consensus       120 ~-~~~~~~~~v~~i~~~~-~~l~~~~-~d~~i~~wd~~~~~~  158 (166)
                      . .+......+..+++++ +.++.+. .++.|..+|. +++.
T Consensus       138 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~  178 (300)
T 2qc5_A          138 EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKL  178 (300)
T ss_dssp             EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE
T ss_pred             EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcE
Confidence            2 2222345678899987 3455444 4678999987 5443

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.47  E-value=3.3e-05  Score=54.03  Aligned_cols=114  Identities=9%  Similarity=-0.127  Sum_probs=72.2

Q ss_pred             ccCCceEEEEe---cCcEEEEEecC------CeEEEEEcccccceehhcCC-CCceEEEEEcCCCCEEEEecCC-----C
Q psy16373         42 AHHQPITVLEC---VSNRVITGSQD------HTLKVYKLEDQQLLFTLHGH-CGPITTLFIDGVSMMSGSGSQD-----G  106 (166)
Q Consensus        42 ~~~~~i~~~~~---~~~~l~~~~~d------~~v~v~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~d-----~  106 (166)
                      .+...+..+.|   ++..|+..+.+      ..|.+||+..++........ ...+..+.|+|+++.++..+.+     +
T Consensus       185 ~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~  264 (396)
T 3c5m_A          185 QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDR  264 (396)
T ss_dssp             EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCE
T ss_pred             cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccc
Confidence            45566778888   25556665543      36888888765433322211 2357889999999877666433     3


Q ss_pred             cEEEEeCcCCeeeEEeecccccEEEEEEcC-C--eEEEee----------------cCCcEEEEECCcccc
Q psy16373        107 LLCVWDTVTGACMYSIQAHDGCIHALTYSD-S--YVISLG----------------QDERLCVWDRFQGHL  158 (166)
Q Consensus       107 ~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~--~l~~~~----------------~d~~i~~wd~~~~~~  158 (166)
                      .+.+||+.+++....... .. .. +.|+| +  .++.++                .+..|.+||+.+++.
T Consensus       265 ~l~~~d~~~g~~~~l~~~-~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~  332 (396)
T 3c5m_A          265 VIYKANPETLENEEVMVM-PP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA  332 (396)
T ss_dssp             EEEEECTTTCCEEEEEEC-CS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred             eEEEEECCCCCeEEeeeC-CC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence            499999988765432221 11 23 78887 4  555543                347899999987764

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.46  E-value=1.8e-06  Score=61.92  Aligned_cols=111  Identities=13%  Similarity=0.006  Sum_probs=85.4

Q ss_pred             cCcEEEEEecC-----CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec----------CCCcEEEEeCcCCe
Q psy16373         53 VSNRVITGSQD-----HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS----------QDGLLCVWDTVTGA  117 (166)
Q Consensus        53 ~~~~l~~~~~d-----~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~d~~v~~~d~~~~~  117 (166)
                      ++..++.....     +.|.++|..+.+.+.++..-..+  .+.++|+++.+..+.          .++.|.++|..+.+
T Consensus        83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~  160 (426)
T 3c75_H           83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL  160 (426)
T ss_dssp             CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred             CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence            56666655542     69999999999999888765555  899999998877765          36789999999999


Q ss_pred             eeEEeecc-------cccEEEEEEcC--CeEEEeec--CCcEEEEECCcccceeeeeec
Q psy16373        118 CMYSIQAH-------DGCIHALTYSD--SYVISLGQ--DERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       118 ~~~~~~~~-------~~~v~~i~~~~--~~l~~~~~--d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      .+..+...       ......+.|+|  .+++.+..  ++.|.+.|+.+++.+.++.++
T Consensus       161 vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~  219 (426)
T 3c75_H          161 PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP  219 (426)
T ss_dssp             EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred             EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC
Confidence            88877532       12234678888  47777764  578999999999999888763

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.44  E-value=6e-05  Score=50.43  Aligned_cols=115  Identities=12%  Similarity=-0.046  Sum_probs=83.2

Q ss_pred             EEEEecCcE-EEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc-
Q psy16373         48 TVLECVSNR-VITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH-  125 (166)
Q Consensus        48 ~~~~~~~~~-l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~-  125 (166)
                      ..+.+.++. ....-.++.+.++|.++.+.+.++.... .-..++  +++..++.+..++.+.++|.++.+.+..+... 
T Consensus        99 eGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~-eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~  175 (268)
T 3nok_A           99 EGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSG-EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL  175 (268)
T ss_dssp             EEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSS-CCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred             eEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCC-ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC
Confidence            346664444 4444468999999999999988877422 223444  45666666667889999999999888877542 


Q ss_pred             -cc---cEEEEEEcCCeEEEee-cCCcEEEEECCcccceeeeeec
Q psy16373        126 -DG---CIHALTYSDSYVISLG-QDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       126 -~~---~v~~i~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                       ..   .++.+.|....++... .+..|.+-|.++++.+..+.+.
T Consensus       176 ~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~  220 (268)
T 3nok_A          176 RGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDAS  220 (268)
T ss_dssp             TTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECH
T ss_pred             CCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECC
Confidence             22   4567788777777666 5788999999999999988764

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.44  E-value=0.00012  Score=51.58  Aligned_cols=108  Identities=9%  Similarity=-0.113  Sum_probs=77.1

Q ss_pred             EEEe--cCcEEEEEe----------cCCeEEEEEcccccceehhcCC-------CCceEEEEEcCCCCEEEEecC--CCc
Q psy16373         49 VLEC--VSNRVITGS----------QDHTLKVYKLEDQQLLFTLHGH-------CGPITTLFIDGVSMMSGSGSQ--DGL  107 (166)
Q Consensus        49 ~~~~--~~~~l~~~~----------~d~~v~v~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~--d~~  107 (166)
                      .+.+  +++.++.+.          .++.|.++|..+.+.+..+...       ......+.++|++++++.++.  +..
T Consensus        70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~  149 (373)
T 2mad_H           70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA  149 (373)
T ss_pred             CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence            6666  888888875          3678999999988776655321       123458999999999988764  478


Q ss_pred             EEEEeCcCCeeeEE-eecccccEEEEEEcCCeEEEeecCCcEEEEECCcccce
Q psy16373        108 LCVWDTVTGACMYS-IQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus       108 v~~~d~~~~~~~~~-~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      |.++| .+++.+.. +.. ...+....+.+..+++.+.|+.+.++|. +++.+
T Consensus       150 v~viD-~t~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~  199 (373)
T 2mad_H          150 VGLVV-QGGSSDDQLLSS-PTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAA  199 (373)
T ss_pred             EEEEE-CCCCEEeEEcCC-CceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEE
Confidence            99999 99988877 543 2233222223356677778999999999 77665

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.44  E-value=4.5e-07  Score=63.62  Aligned_cols=114  Identities=14%  Similarity=-0.046  Sum_probs=73.1

Q ss_pred             eEEEEe--cCcEEEEEecC---CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373         47 ITVLEC--VSNRVITGSQD---HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS  121 (166)
Q Consensus        47 i~~~~~--~~~~l~~~~~d---~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~  121 (166)
                      +.+++|  +++.|+.....   ..+.+||+.+++.......+......+.|+|+++.++..+.++.+++||+.+++....
T Consensus        38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~  117 (396)
T 3c5m_A           38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI  117 (396)
T ss_dssp             TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred             eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence            556667  78887766543   4788889988765443332322233478999999999988888999999988876555


Q ss_pred             eecccccEEE---E----------------EEcC--CeEEEe-----ecCCcEEEEECCccccee
Q psy16373        122 IQAHDGCIHA---L----------------TYSD--SYVISL-----GQDERLCVWDRFQGHLLS  160 (166)
Q Consensus       122 ~~~~~~~v~~---i----------------~~~~--~~l~~~-----~~d~~i~~wd~~~~~~~~  160 (166)
                      ...+......   +                .|+|  +.++..     ..+..|.+||+.+++...
T Consensus       118 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~  182 (396)
T 3c5m_A          118 YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEV  182 (396)
T ss_dssp             EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEE
T ss_pred             EecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEe
Confidence            4433332222   2                3344  222222     356689999998876543

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.41  E-value=5.1e-06  Score=63.14  Aligned_cols=61  Identities=18%  Similarity=0.217  Sum_probs=47.6

Q ss_pred             CCcEEEEeCcCCeeeEEeecccccEE-EEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        105 DGLLCVWDTVTGACMYSIQAHDGCIH-ALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       105 d~~v~~~d~~~~~~~~~~~~~~~~v~-~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      +|.+..||+++++.+..+..+..... .+.-..+.++.++.|+.|+.||.++|+.+.+++++
T Consensus       454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~  515 (689)
T 1yiq_A          454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA  515 (689)
T ss_dssp             EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence            37799999999999888765432211 23334578999999999999999999999988764

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.41  E-value=3.5e-06  Score=63.88  Aligned_cols=110  Identities=16%  Similarity=0.170  Sum_probs=80.2

Q ss_pred             cEEEEEecCCeEEEEEcccccceehhcCCC-----------Cce------------------------EEEEEcCCCCEE
Q psy16373         55 NRVITGSQDHTLKVYKLEDQQLLFTLHGHC-----------GPI------------------------TTLFIDGVSMMS   99 (166)
Q Consensus        55 ~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~-----------~~v------------------------~~~~~~~~~~~~   99 (166)
                      ..++.++.+|.+.++|..+++.+..+....           .++                        ..++++|+...+
T Consensus       328 ~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~  407 (677)
T 1kb0_A          328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLV  407 (677)
T ss_dssp             EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEE
T ss_pred             eEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEE
Confidence            678899999999999999998876543211           001                        146778876666


Q ss_pred             EEecC-------------------------------------------CCcEEEEeCcCCeeeEEeecccccEEE--EEE
Q psy16373        100 GSGSQ-------------------------------------------DGLLCVWDTVTGACMYSIQAHDGCIHA--LTY  134 (166)
Q Consensus       100 ~~~~~-------------------------------------------d~~v~~~d~~~~~~~~~~~~~~~~v~~--i~~  134 (166)
                      .+...                                           .+.+..||+.+++.+..+.. ..++..  +.-
T Consensus       408 yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~  486 (677)
T 1kb0_A          408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH-VSPWNGGTLTT  486 (677)
T ss_dssp             EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE-SSSCCCCEEEE
T ss_pred             EEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC-CCCCcCcceEe
Confidence            55422                                           27899999999998887763 333332  233


Q ss_pred             cCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        135 SDSYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       135 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      ..+.++.++.|+.+++||.++++.+.++.++
T Consensus       487 ~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~  517 (677)
T 1kb0_A          487 AGNVVFQGTADGRLVAYHAATGEKLWEAPTG  517 (677)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             CCCEEEEECCCCcEEEEECCCCceeeeeeCC
Confidence            3468888999999999999999999998764

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=98.41  E-value=3.7e-05  Score=52.19  Aligned_cols=118  Identities=11%  Similarity=0.095  Sum_probs=75.0

Q ss_pred             CceEEEEe--cCcEEEEEecC---------------CeEEEEEcccccceehhcCCCCceEEEEEc----CCCCE-EEEe
Q psy16373         45 QPITVLEC--VSNRVITGSQD---------------HTLKVYKLEDQQLLFTLHGHCGPITTLFID----GVSMM-SGSG  102 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~~d---------------~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~-~~~~  102 (166)
                      ..+.++++  ++++.++...+               +.|..++.. ++... +..+......++++    |+++. +++.
T Consensus       117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~  194 (314)
T 1pjx_A          117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAE  194 (314)
T ss_dssp             BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred             cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEE
Confidence            34778888  56666665544               567777765 43322 22233456889999    99865 4555


Q ss_pred             cCCCcEEEEeCc-CCe-----eeEEeeccc-ccEEEEEEcC-CeE-EEeecCCcEEEEECCcccceeeeee
Q psy16373        103 SQDGLLCVWDTV-TGA-----CMYSIQAHD-GCIHALTYSD-SYV-ISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       103 ~~d~~v~~~d~~-~~~-----~~~~~~~~~-~~v~~i~~~~-~~l-~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ..++.|.+||.. +++     ....+..+. .....+++++ ..+ ++...++.|..||..+++.+..+..
T Consensus       195 ~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~  265 (314)
T 1pjx_A          195 TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC  265 (314)
T ss_dssp             TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC
T ss_pred             CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeC
Confidence            677899999986 443     222233333 5577899987 344 4444678999999987777665543

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=98.39  E-value=5e-06  Score=63.57  Aligned_cols=112  Identities=13%  Similarity=-0.007  Sum_probs=75.0

Q ss_pred             cCCceEEEEe--cCcEEEEEecC-----CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCc--------
Q psy16373         43 HHQPITVLEC--VSNRVITGSQD-----HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGL--------  107 (166)
Q Consensus        43 ~~~~i~~~~~--~~~~l~~~~~d-----~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~--------  107 (166)
                      |...+..++|  ++++|+.++.+     ..|++||+.+++.+.. ..+...+..++|+|+ +.++.++.++.        
T Consensus       161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~  238 (741)
T 1yr2_A          161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA  238 (741)
T ss_dssp             --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred             CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence            3346778888  78888876553     4699999999876543 112222357899999 88887776554        


Q ss_pred             ------EEEEeCcCCee--eEEee--cccccEEEEEEcCC--eEEEeecC-----CcEEEEECCcc
Q psy16373        108 ------LCVWDTVTGAC--MYSIQ--AHDGCIHALTYSDS--YVISLGQD-----ERLCVWDRFQG  156 (166)
Q Consensus       108 ------v~~~d~~~~~~--~~~~~--~~~~~v~~i~~~~~--~l~~~~~d-----~~i~~wd~~~~  156 (166)
                            |++|++.++..  ...+.  .+...+..+.|+|+  +|+..+.+     ..|.+||+.++
T Consensus       239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~  304 (741)
T 1yr2_A          239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG  304 (741)
T ss_dssp             CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred             CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence                  88999876642  22222  23335788999984  56665543     38999999776

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.39  E-value=6.6e-05  Score=50.44  Aligned_cols=116  Identities=12%  Similarity=0.014  Sum_probs=82.3

Q ss_pred             EEEEecCcEEEEEe-cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeeccc
Q psy16373         48 TVLECVSNRVITGS-QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHD  126 (166)
Q Consensus        48 ~~~~~~~~~l~~~~-~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~  126 (166)
                      ..+.+.++.|+.+. .++.+.++|..+.+.+.++......-..  +++++..+..+..++.+.++|..+.+.+..+....
T Consensus        69 eGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~g--lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~  146 (266)
T 2iwa_A           69 EGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGWG--LATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKY  146 (266)
T ss_dssp             EEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSCCE--EEECSSSEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred             EEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCeEE--EEECCCEEEEECCCCeEEEEECCCCcEEEEEEECC
Confidence            35666555555544 5799999999999888877532122123  44566656566678899999999988887775321


Q ss_pred             --c---cEEEEEEcCCeEEEee-cCCcEEEEECCcccceeeeeec
Q psy16373        127 --G---CIHALTYSDSYVISLG-QDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       127 --~---~v~~i~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                        .   ..+.+.|....++... .++.|.+-|..+++.+..+.+.
T Consensus       147 ~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~  191 (266)
T 2iwa_A          147 NGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWILLP  191 (266)
T ss_dssp             TTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEECH
T ss_pred             CCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEECC
Confidence              1   3567788776666665 4789999999999999988763

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.39  E-value=1.1e-05  Score=55.25  Aligned_cols=112  Identities=10%  Similarity=0.026  Sum_probs=79.9

Q ss_pred             ceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec
Q psy16373         46 PITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA  124 (166)
Q Consensus        46 ~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~  124 (166)
                      .+.++.. .+..++.++.++.+..+|.. ++....+......+.++...+++..++..   +.+..+| .+++.+..+..
T Consensus       138 ~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~  212 (330)
T 3hxj_A          138 IYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYA  212 (330)
T ss_dssp             CCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECC
T ss_pred             eeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEcc
Confidence            3444555 35567778888999999998 77666555555566777777777766554   7899999 77777766665


Q ss_pred             ccccEEEEEEcCC-eEEEeecCCcEEEEECCcccceeeee
Q psy16373        125 HDGCIHALTYSDS-YVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       125 ~~~~v~~i~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      ....+.++...++ .++.++.++.|..+|. +++.+..+.
T Consensus       213 ~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~  251 (330)
T 3hxj_A          213 GYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFK  251 (330)
T ss_dssp             SSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEE
T ss_pred             CCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEee
Confidence            5556777777774 8888888888888874 566665554

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.38  E-value=7.1e-05  Score=52.96  Aligned_cols=108  Identities=10%  Similarity=-0.093  Sum_probs=77.9

Q ss_pred             EEe--cCcEEEEEe----------cCCeEEEEEcccccceehhcCC-------CCceEEEEEcCCCCEEEEecC--CCcE
Q psy16373         50 LEC--VSNRVITGS----------QDHTLKVYKLEDQQLLFTLHGH-------CGPITTLFIDGVSMMSGSGSQ--DGLL  108 (166)
Q Consensus        50 ~~~--~~~~l~~~~----------~d~~v~v~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~--d~~v  108 (166)
                      +.+  ++++++.++          .++.|.+||..+.+.+.++...       ......+.++|+++++..+..  ++.|
T Consensus        83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V  162 (386)
T 3sjl_D           83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV  162 (386)
T ss_dssp             EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred             EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence            666  788777765          3678999999999888776422       123567999999998887764  6899


Q ss_pred             EEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCc-ccc
Q psy16373        109 CVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQ-GHL  158 (166)
Q Consensus       109 ~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~-~~~  158 (166)
                      .++|+.+++.+..+.... ...........+++.+.||.+.+.++.+ ++.
T Consensus       163 sVID~~t~~vv~tI~v~g-~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v  212 (386)
T 3sjl_D          163 GVVDLEGKAFKRMLDVPD-CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP  212 (386)
T ss_dssp             EEEETTTTEEEEEEECCS-EEEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred             EEEECCCCcEEEEEECCC-cceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence            999999999998885422 1111111235677888899999999876 554

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.37  E-value=8.3e-05  Score=49.68  Aligned_cols=115  Identities=10%  Similarity=0.053  Sum_probs=82.5

Q ss_pred             EEEEecCcEEEEEe-cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc-
Q psy16373         48 TVLECVSNRVITGS-QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH-  125 (166)
Q Consensus        48 ~~~~~~~~~l~~~~-~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~-  125 (166)
                      ..+.+.++.|+... .++.+.++|.++.+.+.++..... -..++  +++..++.+..++.+.++|..+.+.+..+... 
T Consensus        90 eGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~e-G~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~  166 (262)
T 3nol_A           90 EGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGE-GWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTA  166 (262)
T ss_dssp             EEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEE
T ss_pred             eEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCC-ceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEecc
Confidence            34666555555544 589999999999998888774321 12333  45666666666788999999999888877542 


Q ss_pred             -c---ccEEEEEEcCCeEEEee-cCCcEEEEECCcccceeeeeec
Q psy16373        126 -D---GCIHALTYSDSYVISLG-QDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       126 -~---~~v~~i~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                       .   ..++.+.|....++... .+..|.+.|.++++.+..+.+.
T Consensus       167 ~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~  211 (262)
T 3nol_A          167 HGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLN  211 (262)
T ss_dssp             TTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECT
T ss_pred             CCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECC
Confidence             1   23456778777777666 5789999999999999988864

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.36  E-value=0.00017  Score=48.50  Aligned_cols=117  Identities=8%  Similarity=-0.049  Sum_probs=84.1

Q ss_pred             eEEEEecC-cEEEEEec---CCeEEEEEcccccceehhcC-CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373         47 ITVLECVS-NRVITGSQ---DHTLKVYKLEDQQLLFTLHG-HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS  121 (166)
Q Consensus        47 i~~~~~~~-~~l~~~~~---d~~v~v~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~  121 (166)
                      ...+.+++ ..|+.++.   ++.|.++|..+++.+..+.. .......+++.. +..+++.-.++.+.++|..+.+.+..
T Consensus        23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~~  101 (266)
T 2iwa_A           23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIKN  101 (266)
T ss_dssp             EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEEE
T ss_pred             cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEEE
Confidence            57888832 45555442   58999999999998877652 222334566653 35566667789999999999999988


Q ss_pred             eecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        122 IQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       122 ~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      +......-+.++.+...++++..++.|.+.|..+.+.+.++.+
T Consensus       102 i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V  144 (266)
T 2iwa_A          102 FTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV  144 (266)
T ss_dssp             EECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred             EECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence            8543122245777667777777889999999999988888765

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=98.34  E-value=0.00018  Score=48.28  Aligned_cols=111  Identities=6%  Similarity=-0.026  Sum_probs=75.3

Q ss_pred             CCceEEEEe--cCcEEEEEecCCeEEEEEccccccee-hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373         44 HQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF-TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY  120 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~  120 (166)
                      ...+.++++  ++.+.++...++.|..+|.. ++... .+......+..+++.++++.+++...++.+..+|. +++...
T Consensus       103 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~  180 (300)
T 2qc5_A          103 DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE  180 (300)
T ss_dssp             TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE
T ss_pred             CCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE
Confidence            356788888  56666665557899999987 54332 22324456899999999998887777889999998 554433


Q ss_pred             E-eecccccEEEEEEcC-CeEEEee-cCCcEEEEECCccc
Q psy16373        121 S-IQAHDGCIHALTYSD-SYVISLG-QDERLCVWDRFQGH  157 (166)
Q Consensus       121 ~-~~~~~~~v~~i~~~~-~~l~~~~-~d~~i~~wd~~~~~  157 (166)
                      . .......+..+++++ +.++.+. ..+.|..||. +++
T Consensus       181 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~  219 (300)
T 2qc5_A          181 YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE  219 (300)
T ss_dssp             EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred             eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc
Confidence            1 222334678899987 4555554 4567999997 444

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=98.29  E-value=2.1e-05  Score=56.15  Aligned_cols=111  Identities=10%  Similarity=0.089  Sum_probs=78.2

Q ss_pred             CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCC--cEEEEeCcCCeeeE
Q psy16373         45 QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDG--LLCVWDTVTGACMY  120 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~--~v~~~d~~~~~~~~  120 (166)
                      .....+++  +++++++...++.|++||..++.......... ... ++++++++.++.+..++  .+.+++...+....
T Consensus       131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~  208 (409)
T 3hrp_A          131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT  208 (409)
T ss_dssp             CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred             CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence            35678888  56666666667999999998776554433322 233 99999999888877765  78889887665433


Q ss_pred             Ee---ec-ccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373        121 SI---QA-HDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       121 ~~---~~-~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      .+   .. ....+..++++|  ..|+.+..++.|+.||..++.
T Consensus       209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~  251 (409)
T 3hrp_A          209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE  251 (409)
T ss_dssp             EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC
T ss_pred             EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC
Confidence            33   12 345567899998  467777778899999987665

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.28  E-value=0.00023  Score=47.09  Aligned_cols=115  Identities=16%  Similarity=0.073  Sum_probs=82.4

Q ss_pred             EEEEecCcEEE-EEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeeccc
Q psy16373         48 TVLECVSNRVI-TGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHD  126 (166)
Q Consensus        48 ~~~~~~~~~l~-~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~  126 (166)
                      ..+.+.++.|+ ..-.++.+.++|.++.+.+.++..... -..++  +++..+..+..++.+.++|..+.+.+..+....
T Consensus        68 eGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~-Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~  144 (243)
T 3mbr_X           68 AGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGE-GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA  144 (243)
T ss_dssp             EEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSC-CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred             eEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCC-ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc
Confidence            34555445444 444689999999999998888774332 24444  455555555568899999999998888775422


Q ss_pred             -----ccEEEEEEcCCeEEEee-cCCcEEEEECCcccceeeeeec
Q psy16373        127 -----GCIHALTYSDSYVISLG-QDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       127 -----~~v~~i~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                           ..++.+.+....++... .+..|.+-|.++++.+..+.+.
T Consensus       145 ~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~  189 (243)
T 3mbr_X          145 GGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQ  189 (243)
T ss_dssp             TTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECG
T ss_pred             CCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECC
Confidence                 24567778777676666 5778999999999999988864

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=98.28  E-value=0.00012  Score=49.72  Aligned_cols=121  Identities=12%  Similarity=0.066  Sum_probs=74.4

Q ss_pred             CceEEEEe--cCcEEEEEecC---------CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEE-EEecCCCcEEEEe
Q psy16373         45 QPITVLEC--VSNRVITGSQD---------HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMS-GSGSQDGLLCVWD  112 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~~d---------~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~d~~v~~~d  112 (166)
                      ..++.+++  ++++.++....         ..-.+|.+........+.......+.++|+|+++.+ ++.+.++.|..||
T Consensus        98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~  177 (297)
T 3g4e_A           98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFD  177 (297)
T ss_dssp             EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred             CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEe
Confidence            34677888  56655543221         233455554322222222233456889999998755 5556678999998


Q ss_pred             C--cCCee-----eEEeecccccEEEEEEcC-CeEEEee-cCCcEEEEECCcccceeeeeec
Q psy16373        113 T--VTGAC-----MYSIQAHDGCIHALTYSD-SYVISLG-QDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       113 ~--~~~~~-----~~~~~~~~~~v~~i~~~~-~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      +  .++..     ...+..+......+++++ ..++.+. .++.|..||..+++.+..+..+
T Consensus       178 ~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p  239 (297)
T 3g4e_A          178 YDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP  239 (297)
T ss_dssp             ECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS
T ss_pred             ccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC
Confidence            7  45532     222233345667889987 3454444 5677999999989988877654

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=98.26  E-value=0.0002  Score=54.85  Aligned_cols=120  Identities=12%  Similarity=-0.012  Sum_probs=75.8

Q ss_pred             cCCceEEEEe--cCcEEEEEecCC-----eEEEEEcccc--cceehhcCCCCceEEEEEcCCCCEEEEecC----CCcEE
Q psy16373         43 HHQPITVLEC--VSNRVITGSQDH-----TLKVYKLEDQ--QLLFTLHGHCGPITTLFIDGVSMMSGSGSQ----DGLLC  109 (166)
Q Consensus        43 ~~~~i~~~~~--~~~~l~~~~~d~-----~v~v~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----d~~v~  109 (166)
                      +...+..+.|  ++++|+..+.++     .|.+||+.++  +....+..+...+.... .|++..++..+.    ++.|.
T Consensus       266 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~  344 (741)
T 1yr2_A          266 LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIV  344 (741)
T ss_dssp             CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEE
T ss_pred             CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEE
Confidence            3345778888  788888777544     8999999876  31344554544444443 477777776654    34599


Q ss_pred             EEeCcCC--eeeEEeecccccEEEEEEcCC-eEEEeecCCcEEEEECC-cccceeeee
Q psy16373        110 VWDTVTG--ACMYSIQAHDGCIHALTYSDS-YVISLGQDERLCVWDRF-QGHLLSTIQ  163 (166)
Q Consensus       110 ~~d~~~~--~~~~~~~~~~~~v~~i~~~~~-~l~~~~~d~~i~~wd~~-~~~~~~~~~  163 (166)
                      +||+.++  .....+..+...+..+.|..+ .+++...|+..++|.+. +++.+..+.
T Consensus       345 ~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~  402 (741)
T 1yr2_A          345 RVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVS  402 (741)
T ss_dssp             EEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECB
T ss_pred             EEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeecc
Confidence            9999874  333333444455667777764 66777778877777553 355444443

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=98.20  E-value=0.00011  Score=49.85  Aligned_cols=91  Identities=12%  Similarity=0.116  Sum_probs=68.1

Q ss_pred             CceEEEEe--cCcEEE-EEecCCeEEEEEc--ccccc-----eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373         45 QPITVLEC--VSNRVI-TGSQDHTLKVYKL--EDQQL-----LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~-~~~~d~~v~v~~~--~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~  114 (166)
                      ...+.++|  +++.|+ +.+.++.|.+|++  .++..     ...+..+......++++++++++++...++.|..||..
T Consensus       149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~  228 (297)
T 3g4e_A          149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV  228 (297)
T ss_dssp             SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred             ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence            34567888  566554 5556789999987  34432     22222334567899999999988888788899999999


Q ss_pred             CCeeeEEeecccccEEEEEEc
Q psy16373        115 TGACMYSIQAHDGCIHALTYS  135 (166)
Q Consensus       115 ~~~~~~~~~~~~~~v~~i~~~  135 (166)
                      +++.+..+..+...+++++|.
T Consensus       229 tG~~~~~i~~p~~~~t~~~f~  249 (297)
T 3g4e_A          229 TGKRLQTVKLPVDKTTSCCFG  249 (297)
T ss_dssp             TCCEEEEEECSSSBEEEEEEE
T ss_pred             CceEEEEEECCCCCceEEEEe
Confidence            899888888776789999998

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.19  E-value=0.00015  Score=55.08  Aligned_cols=112  Identities=18%  Similarity=0.255  Sum_probs=78.6

Q ss_pred             cCcEEEEEec------CCeEEEEEcccccceehhcCCCC--------------------------------ceEEEEEcC
Q psy16373         53 VSNRVITGSQ------DHTLKVYKLEDQQLLFTLHGHCG--------------------------------PITTLFIDG   94 (166)
Q Consensus        53 ~~~~l~~~~~------d~~v~v~~~~~~~~~~~~~~~~~--------------------------------~v~~~~~~~   94 (166)
                      .++.++.++.      ++.|+.+|.++++.+..+.....                                ....++++|
T Consensus       173 ~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~  252 (677)
T 1kb0_A          173 FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA  252 (677)
T ss_dssp             ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET
T ss_pred             ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC
Confidence            4556666553      79999999999988766543211                                112567888


Q ss_pred             CCCEEEEecCCC-------------------cEEEEeCcCCeeeEEeec--cc--------ccE-EEEEEcC---CeEEE
Q psy16373         95 VSMMSGSGSQDG-------------------LLCVWDTVTGACMYSIQA--HD--------GCI-HALTYSD---SYVIS  141 (166)
Q Consensus        95 ~~~~~~~~~~d~-------------------~v~~~d~~~~~~~~~~~~--~~--------~~v-~~i~~~~---~~l~~  141 (166)
                      ++..+..+..++                   .|..+|.++++.+..++.  |.        .++ .......   +.++.
T Consensus       253 ~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~  332 (677)
T 1kb0_A          253 ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILH  332 (677)
T ss_dssp             TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEE
T ss_pred             CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEE
Confidence            878887776654                   599999999999888764  21        122 2222233   57889


Q ss_pred             eecCCcEEEEECCcccceeeeee
Q psy16373        142 LGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       142 ~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ++.+|.++++|.++|+.+..++.
T Consensus       333 ~~~~G~l~~lD~~tG~~l~~~~~  355 (677)
T 1kb0_A          333 APKNGFFFVLDRTNGKFISAKNF  355 (677)
T ss_dssp             CCTTSEEEEEETTTCCEEEEEES
T ss_pred             ECCCCEEEEEECCCCCEeccccc
Confidence            99999999999999999887653

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.19  E-value=0.00028  Score=50.63  Aligned_cols=108  Identities=9%  Similarity=-0.153  Sum_probs=75.5

Q ss_pred             EEEe--cCcEEEEEe----------cCCeEEEEEcccccceehhcCC-------CCceEEEEEcCCCCEEEEecC--CCc
Q psy16373         49 VLEC--VSNRVITGS----------QDHTLKVYKLEDQQLLFTLHGH-------CGPITTLFIDGVSMMSGSGSQ--DGL  107 (166)
Q Consensus        49 ~~~~--~~~~l~~~~----------~d~~v~v~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~--d~~  107 (166)
                      .+.+  +++.++.+.          .++.|.++|..+.+.+.++...       ......+.++|+++++..+..  ++.
T Consensus       122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~  201 (426)
T 3c75_H          122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA  201 (426)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred             ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence            5666  777777765          4679999999999887776421       123467899999998888764  578


Q ss_pred             EEEEeCcCCeeeEEeecccccEEEEEE-cCCeEEEeecCCcEEEEECCcccc
Q psy16373        108 LCVWDTVTGACMYSIQAHDGCIHALTY-SDSYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus       108 v~~~d~~~~~~~~~~~~~~~~v~~i~~-~~~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      |.+.|+.+.+.+..+.....  ..+.- .+..+++.+.|+.+.+.+..+++.
T Consensus       202 VsVID~~t~kvv~~I~v~g~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v  251 (426)
T 3c75_H          202 VGVVDLEGKTFDRMLDVPDC--YHIFPASPTVFYMNCRDGSLARVDFADGET  251 (426)
T ss_dssp             EEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSSEEEEECCTTCC
T ss_pred             EEEEECCCCeEEEEEEcCCc--eeeccCCCcEEEEEcCCCCEEEEECCCCcE
Confidence            99999999998888764221  11211 224566667778777777755443

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.15  E-value=0.00053  Score=46.67  Aligned_cols=137  Identities=7%  Similarity=-0.044  Sum_probs=83.5

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehh---cC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTL---HG   82 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~---~~   82 (166)
                      .+++++..++.+..|+.. ..        ...+..+...+..+++  +++++++...++.|.+|+.. ++.....   .+
T Consensus        58 ~l~~~d~~~~~i~~~~~~-g~--------~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~  127 (305)
T 3dr2_A           58 TLVWSDLVGRRVLGWRED-GT--------VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAG  127 (305)
T ss_dssp             EEEEEETTTTEEEEEETT-SC--------EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETT
T ss_pred             EEEEEECCCCEEEEEeCC-CC--------EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCC
Confidence            355666666666555432 11        1123334566788888  66655555556889999986 4322111   11


Q ss_pred             -CCCceEEEEEcCCCCEEEE----ecC-------------CCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEe
Q psy16373         83 -HCGPITTLFIDGVSMMSGS----GSQ-------------DGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISL  142 (166)
Q Consensus        83 -~~~~v~~~~~~~~~~~~~~----~~~-------------d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~  142 (166)
                       ....+..++++++++.+++    |..             .+.|..+|..+++.....  .....+.++|+|+  .|+.+
T Consensus       128 ~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~  205 (305)
T 3dr2_A          128 KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVS  205 (305)
T ss_dssp             EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEE
T ss_pred             CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEE
Confidence             1134678999999998886    332             246777887666543332  3345678999984  57766


Q ss_pred             ecC------CcEEEEECCcc
Q psy16373        143 GQD------ERLCVWDRFQG  156 (166)
Q Consensus       143 ~~d------~~i~~wd~~~~  156 (166)
                      ...      +.|..|++..+
T Consensus       206 ~~~~~~~~~~~i~~~~~~~~  225 (305)
T 3dr2_A          206 QTPEQGHGSVEITAFAWRDG  225 (305)
T ss_dssp             ECCC---CCCEEEEEEEETT
T ss_pred             ecCCcCCCCCEEEEEEecCC
Confidence            654      68999998654

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.11  E-value=7e-05  Score=51.19  Aligned_cols=114  Identities=11%  Similarity=0.051  Sum_probs=75.9

Q ss_pred             CceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee
Q psy16373         45 QPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ  123 (166)
Q Consensus        45 ~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~  123 (166)
                      ..+.++.. .+..+..++  +.+..+| .+++....+......+.++...+++..++ ++.++.+..+|. +++.+..+.
T Consensus       177 ~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~-~g~~~~~~~  251 (330)
T 3hxj_A          177 AITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYV-TSLDGHLYAINP-DGTEKWRFK  251 (330)
T ss_dssp             CCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEE-EETTTEEEEECT-TSCEEEEEE
T ss_pred             CceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEE-EcCCCeEEEECC-CCCEeEEee
Confidence            34455555 344455555  8889999 67766665555556678888888776555 456777888874 566666655


Q ss_pred             cccccEEEEEEc-CCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        124 AHDGCIHALTYS-DSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       124 ~~~~~v~~i~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .....+..+... .+.++.++.++.|..+|. +++.+..+..
T Consensus       252 ~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~~~~  292 (330)
T 3hxj_A          252 TGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWNFET  292 (330)
T ss_dssp             CSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEEEEEC
T ss_pred             CCCCccccceEcCCCeEEEecCCCCEEEECC-CCcEEEEEEc
Confidence            444434445556 368888998989999996 6777666553

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.10  E-value=0.00022  Score=49.49  Aligned_cols=115  Identities=14%  Similarity=0.099  Sum_probs=76.4

Q ss_pred             CceEEEEe--cCcEEEEEec--CCeEEEEEcccccceehh-------cCCCCceEEEEEcCCCCEEEEecC-----CCcE
Q psy16373         45 QPITVLEC--VSNRVITGSQ--DHTLKVYKLEDQQLLFTL-------HGHCGPITTLFIDGVSMMSGSGSQ-----DGLL  108 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~~--d~~v~v~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~-----d~~v  108 (166)
                      .....+++  +++.+++...  ++.++||.+.+++.. .+       ..+...+..++++++++++++-..     ++.|
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i   95 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL   95 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence            46778888  6677777532  342555555444332 12       124567899999999887776543     5789


Q ss_pred             EEEeCcCCeeeEEeecc------cccEEEEEEcC--CeEEEe-e---cCCcEEEEECCccccee
Q psy16373        109 CVWDTVTGACMYSIQAH------DGCIHALTYSD--SYVISL-G---QDERLCVWDRFQGHLLS  160 (166)
Q Consensus       109 ~~~d~~~~~~~~~~~~~------~~~v~~i~~~~--~~l~~~-~---~d~~i~~wd~~~~~~~~  160 (166)
                      .+||+.+++.+..+...      ...+..+++++  +.++.+ .   .++.|.+||+.+++...
T Consensus        96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r  159 (343)
T 2qe8_A           96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAAR  159 (343)
T ss_dssp             EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEE
T ss_pred             EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEE
Confidence            99999999877666432      23467899985  355444 3   57899999998776544

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.09  E-value=0.00055  Score=51.94  Aligned_cols=61  Identities=16%  Similarity=0.250  Sum_probs=47.5

Q ss_pred             CCcEEEEeCcCCeeeEEeecccccE-EEEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        105 DGLLCVWDTVTGACMYSIQAHDGCI-HALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       105 d~~v~~~d~~~~~~~~~~~~~~~~v-~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      +|.+..||+.+++.+.....+.... ..+....+.++.++.|+.++.||.++++.+.+++++
T Consensus       437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~  498 (668)
T 1kv9_A          437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQ  498 (668)
T ss_dssp             EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCC
Confidence            4789999999999888776433221 234445678999999999999999999999988754

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.09  E-value=0.00083  Score=46.25  Aligned_cols=108  Identities=12%  Similarity=-0.021  Sum_probs=67.0

Q ss_pred             CCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc--C--CCCceEEEEEcCCCCEEEEecC------CCcEEEE
Q psy16373         44 HQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH--G--HCGPITTLFIDGVSMMSGSGSQ------DGLLCVW  111 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~--~--~~~~v~~~~~~~~~~~~~~~~~------d~~v~~~  111 (166)
                      ...+.++.+  ++++++ ++. ..|.+||..+++......  .  ....+.++.++|+++.+++...      .+.+..+
T Consensus        89 ~~~v~~i~~~~dg~l~v-~~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~  166 (326)
T 2ghs_A           89 PFMGSALAKISDSKQLI-ASD-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV  166 (326)
T ss_dssp             SSCEEEEEEEETTEEEE-EET-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred             CCcceEEEEeCCCeEEE-EEC-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence            356888888  555554 444 459999998776432111  1  1245889999999987776532      2455555


Q ss_pred             eCcCCeeeEEeecccccEEEEEEcCC--eEEEe-ecCCcEEEEECC--cc
Q psy16373        112 DTVTGACMYSIQAHDGCIHALTYSDS--YVISL-GQDERLCVWDRF--QG  156 (166)
Q Consensus       112 d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~-~~d~~i~~wd~~--~~  156 (166)
                      +  +++.. .+.........++|+++  .++.+ +.++.|.+||+.  ++
T Consensus       167 ~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~G  213 (326)
T 2ghs_A          167 A--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTG  213 (326)
T ss_dssp             E--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTC
T ss_pred             e--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccC
Confidence            5  45433 23223345678999983  45444 456889999985  55

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=98.07  E-value=0.00031  Score=50.13  Aligned_cols=104  Identities=13%  Similarity=-0.011  Sum_probs=67.5

Q ss_pred             EEe--cCcEEEEEecCC--eEEEEEcccccceehh----cCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373         50 LEC--VSNRVITGSQDH--TLKVYKLEDQQLLFTL----HGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMY  120 (166)
Q Consensus        50 ~~~--~~~~l~~~~~d~--~v~v~~~~~~~~~~~~----~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~  120 (166)
                      +++  +++.|+.+..++  .|.+++...+.....+    ......+.+++++|+ +..++ +..++.|..||..++....
T Consensus       176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~  254 (409)
T 3hrp_A          176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTL  254 (409)
T ss_dssp             CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEE
T ss_pred             eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEE
Confidence            666  777888887765  7888888765443332    213456788999995 55554 6678899999998765322


Q ss_pred             E----eeccccc--EEEEEEcC--CeEEEe-ecCCcEEEEECC
Q psy16373        121 S----IQAHDGC--IHALTYSD--SYVISL-GQDERLCVWDRF  154 (166)
Q Consensus       121 ~----~~~~~~~--v~~i~~~~--~~l~~~-~~d~~i~~wd~~  154 (166)
                      .    ..+....  ...++|+|  +.|+.+ ..++.|+.|+..
T Consensus       255 ~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~  297 (409)
T 3hrp_A          255 IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPD  297 (409)
T ss_dssp             EEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred             EecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecC
Confidence            2    1122222  23899998  355444 457889999865

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.04  E-value=7.2e-05  Score=55.70  Aligned_cols=61  Identities=18%  Similarity=0.156  Sum_probs=46.3

Q ss_pred             CCCcEEEEeCcCCeeeEEeecccccEE--EEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        104 QDGLLCVWDTVTGACMYSIQAHDGCIH--ALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       104 ~d~~v~~~d~~~~~~~~~~~~~~~~v~--~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      .++.+..||+.+++.+.++.... .+.  .+....+.++.++.|+.|+.+|.++++.+.++++.
T Consensus       442 ~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~  504 (571)
T 2ad6_A          442 EMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMP  504 (571)
T ss_dssp             CCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             CCCeEEEEECCCCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence            35789999999999887775322 221  12334578888999999999999999999988764

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.03  E-value=2.6e-05  Score=54.87  Aligned_cols=89  Identities=12%  Similarity=-0.080  Sum_probs=69.7

Q ss_pred             eEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec----------CCCcEEEEeCcCCeeeEEeeccc-------c
Q psy16373         65 TLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS----------QDGLLCVWDTVTGACMYSIQAHD-------G  127 (166)
Q Consensus        65 ~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~d~~v~~~d~~~~~~~~~~~~~~-------~  127 (166)
                      .|.++|..+++.+.++.....+  .+.++|++..+..+.          .++.|.+||+.+++.+..+....       .
T Consensus        47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~  124 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP  124 (368)
T ss_dssp             EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred             eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence            8889999999999888765555  799999988887775          36789999999999999886431       1


Q ss_pred             cEEEEEEcC--CeEEEeec--CCcEEE--EECCc
Q psy16373        128 CIHALTYSD--SYVISLGQ--DERLCV--WDRFQ  155 (166)
Q Consensus       128 ~v~~i~~~~--~~l~~~~~--d~~i~~--wd~~~  155 (166)
                      ....++++|  .+++++..  +..+.+  +|..+
T Consensus       125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t  158 (368)
T 1mda_H          125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD  158 (368)
T ss_dssp             CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred             CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence            234688888  37777764  456888  89876

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.03  E-value=0.00049  Score=52.44  Aligned_cols=110  Identities=17%  Similarity=0.210  Sum_probs=76.6

Q ss_pred             CcEEEEEe------cCCeEEEEEcccccceehhcCC--C-----------------------------CceEEEEEcCCC
Q psy16373         54 SNRVITGS------QDHTLKVYKLEDQQLLFTLHGH--C-----------------------------GPITTLFIDGVS   96 (166)
Q Consensus        54 ~~~l~~~~------~d~~v~v~~~~~~~~~~~~~~~--~-----------------------------~~v~~~~~~~~~   96 (166)
                      +..++.++      .++.|..||.++++.+..+...  .                             ..-..++++|+.
T Consensus       167 ~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~  246 (689)
T 1yiq_A          167 NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPEL  246 (689)
T ss_dssp             TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTT
T ss_pred             CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCC
Confidence            44555544      3789999999999887655420  0                             011256788888


Q ss_pred             CEEEEecCCCc-------------------EEEEeCcCCeeeEEeec--cc-------cc--EEEEEEcC---CeEEEee
Q psy16373         97 MMSGSGSQDGL-------------------LCVWDTVTGACMYSIQA--HD-------GC--IHALTYSD---SYVISLG  143 (166)
Q Consensus        97 ~~~~~~~~d~~-------------------v~~~d~~~~~~~~~~~~--~~-------~~--v~~i~~~~---~~l~~~~  143 (166)
                      ..+..+..++.                   +..+|.++++.+..++.  |.       .+  +..+.+..   +.++.++
T Consensus       247 ~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~  326 (689)
T 1yiq_A          247 NLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAP  326 (689)
T ss_dssp             TEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECC
T ss_pred             CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEEC
Confidence            88888877763                   99999999999888764  21       11  12233333   2788899


Q ss_pred             cCCcEEEEECCcccceeeee
Q psy16373        144 QDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       144 ~d~~i~~wd~~~~~~~~~~~  163 (166)
                      .+|.++++|.++|+.+...+
T Consensus       327 ~~G~l~~lD~~tG~~l~~~~  346 (689)
T 1yiq_A          327 KNGFFYVIDRATGELLSAKG  346 (689)
T ss_dssp             TTSEEEEEETTTCCEEEEEE
T ss_pred             CCCeEEEEECCCCCEecccc
Confidence            99999999999999986544

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.03  E-value=0.0015  Score=47.09  Aligned_cols=147  Identities=8%  Similarity=0.004  Sum_probs=93.0

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeee--------ccCCceEEEEe--cCcEEEEEecC------CeEE
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR--------AHHQPITVLEC--VSNRVITGSQD------HTLK   67 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~~~--~~~~l~~~~~d------~~v~   67 (166)
                      ..+++++++|..++.|.+.+........   +...+++        +... -..+..  ++ .++++..+      +.+.
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p---~~~k~ie~~~~~~~~g~s~-Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~  167 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREP---KIIKVIEPEEVKKVSGYSR-LHTVHCGPDA-IYISALGNEEGEGPGGIL  167 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSC---EEEEEECHHHHHHHHCEEE-EEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCc---eeeeeechhhcccccCCCc-ccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence            3478899999999988887764322111   1111221        1111 122333  55 66665555      7899


Q ss_pred             EEEcccccceehhcCCC---CceEEEEEcCCCCEEEEec-------------------CCCcEEEEeCcCCeeeEEeecc
Q psy16373         68 VYKLEDQQLLFTLHGHC---GPITTLFIDGVSMMSGSGS-------------------QDGLLCVWDTVTGACMYSIQAH  125 (166)
Q Consensus        68 v~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~-------------------~d~~v~~~d~~~~~~~~~~~~~  125 (166)
                      ++|.++.+.+.++....   ..-..+.|+|+++.+++..                   .+.+|.+||+.+++.+.++...
T Consensus       168 vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg  247 (462)
T 2ece_A          168 MLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG  247 (462)
T ss_dssp             EECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred             EEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence            99999998887776321   2235688899999888874                   3679999999998888887653


Q ss_pred             -c-ccEEEEEE--cCC--eEEEee------cCCcEEEEECCc
Q psy16373        126 -D-GCIHALTY--SDS--YVISLG------QDERLCVWDRFQ  155 (166)
Q Consensus       126 -~-~~v~~i~~--~~~--~l~~~~------~d~~i~~wd~~~  155 (166)
                       . .....+.|  +|+  +.+.++      .+++|.+|....
T Consensus       248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~  289 (462)
T 2ece_A          248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED  289 (462)
T ss_dssp             TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET
T ss_pred             CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC
Confidence             1 23345555  773  555554      566787765543

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.03  E-value=6.8e-05  Score=57.01  Aligned_cols=114  Identities=16%  Similarity=0.043  Sum_probs=74.0

Q ss_pred             ccCCceEEEEe--cCcEEEE-----EecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCC--------
Q psy16373         42 AHHQPITVLEC--VSNRVIT-----GSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDG--------  106 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~-----~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~--------  106 (166)
                      ++...+..++|  ++++|+-     |+....|++||+.+++.+.. .........++|+ +++.++.++.+.        
T Consensus       126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~  203 (693)
T 3iuj_A          126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA  203 (693)
T ss_dssp             TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred             CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence            35556778888  7887774     33346799999999876543 1111113567899 998888777663        


Q ss_pred             -----cEEEEeCcCCe----eeEEeec-ccccEEEEEEcCC--eE-EEeec---CCcEEEEECCccc
Q psy16373        107 -----LLCVWDTVTGA----CMYSIQA-HDGCIHALTYSDS--YV-ISLGQ---DERLCVWDRFQGH  157 (166)
Q Consensus       107 -----~v~~~d~~~~~----~~~~~~~-~~~~v~~i~~~~~--~l-~~~~~---d~~i~~wd~~~~~  157 (166)
                           .|++|++.+..    .+..... +......+.|+|+  +| ++...   ++.|.++|+.++.
T Consensus       204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~  270 (693)
T 3iuj_A          204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQEN  270 (693)
T ss_dssp             -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTT
T ss_pred             cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCC
Confidence                 39999987664    2333333 3445678899984  44 33332   3589999987763

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.02  E-value=8.2e-05  Score=55.53  Aligned_cols=60  Identities=22%  Similarity=0.232  Sum_probs=46.5

Q ss_pred             CCcEEEEeCcCCeeeEEeecccccEE--EEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        105 DGLLCVWDTVTGACMYSIQAHDGCIH--ALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       105 d~~v~~~d~~~~~~~~~~~~~~~~v~--~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      +|.+..||+.+++.+.+..... ++.  .+....+.++.++.|+.++.||.++|+.+.+++++
T Consensus       465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~  526 (582)
T 1flg_A          465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTG  526 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCC
Confidence            5789999999999887765432 221  23334578888999999999999999999988764

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=97.97  E-value=0.00015  Score=54.35  Aligned_cols=61  Identities=16%  Similarity=0.189  Sum_probs=46.5

Q ss_pred             CCCcEEEEeCcCCeeeEEeecccccEE--EEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        104 QDGLLCVWDTVTGACMYSIQAHDGCIH--ALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       104 ~d~~v~~~d~~~~~~~~~~~~~~~~v~--~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      .+|.+..||+.+++.+...... .+..  .+.-..+.++.++.|+.|+.||.++|+.+.+++++
T Consensus       451 ~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~  513 (599)
T 1w6s_A          451 GLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIP  513 (599)
T ss_dssp             CCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             CcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCC
Confidence            3578999999999888776422 1221  13445578888999999999999999999988764

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=97.95  E-value=0.001  Score=50.65  Aligned_cols=110  Identities=14%  Similarity=0.030  Sum_probs=68.8

Q ss_pred             EEEe-cCcEEEEEecCC-------------eEEEEEcccccc----eehhcC-CCCceEEEEEcCCCCEEEEec----CC
Q psy16373         49 VLEC-VSNRVITGSQDH-------------TLKVYKLEDQQL----LFTLHG-HCGPITTLFIDGVSMMSGSGS----QD  105 (166)
Q Consensus        49 ~~~~-~~~~l~~~~~d~-------------~v~v~~~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~~~~~~----~d  105 (166)
                      .++| +++.|+.++.+.             .|.+|++.+...    +..... +......+.++|++++++...    .+
T Consensus       179 ~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~  258 (693)
T 3iuj_A          179 GISWLGNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSG  258 (693)
T ss_dssp             CCEEETTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSC
T ss_pred             cEEEeCCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCC
Confidence            3445 788888887774             499999976542    223233 334567899999998875432    23


Q ss_pred             CcEEEEeCcCCe-eeEEeecccccEEEEEE-cCCeE-EEeecC---CcEEEEECCcccc
Q psy16373        106 GLLCVWDTVTGA-CMYSIQAHDGCIHALTY-SDSYV-ISLGQD---ERLCVWDRFQGHL  158 (166)
Q Consensus       106 ~~v~~~d~~~~~-~~~~~~~~~~~v~~i~~-~~~~l-~~~~~d---~~i~~wd~~~~~~  158 (166)
                      ..++++|+.++. ....+..+......... ..+.+ +....+   +.|..+|+.++..
T Consensus       259 ~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~  317 (693)
T 3iuj_A          259 NRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGP  317 (693)
T ss_dssp             CEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred             cEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence            589999997763 34455555554444322 23444 444333   5799999987654

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=97.92  E-value=0.00015  Score=52.24  Aligned_cols=110  Identities=10%  Similarity=0.150  Sum_probs=77.4

Q ss_pred             CcE-EEEEecCCeEEEEEcccc----cceehhc-------CCCCceEEEEEcCCCCEEEEecCC------CcEEEEeCcC
Q psy16373         54 SNR-VITGSQDHTLKVYKLEDQ----QLLFTLH-------GHCGPITTLFIDGVSMMSGSGSQD------GLLCVWDTVT  115 (166)
Q Consensus        54 ~~~-l~~~~~d~~v~v~~~~~~----~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~d------~~v~~~d~~~  115 (166)
                      .++ ++.+-.+++|.++|+.+.    +....+.       .....-..+...|++ .++++..+      +.+.+.|.++
T Consensus        95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T  173 (462)
T 2ece_A           95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYS  173 (462)
T ss_dssp             SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTT
T ss_pred             CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCC
Confidence            444 555667899999999755    3333331       112245667788999 66666555      7899999999


Q ss_pred             CeeeEEeeccccc---EEEEEEcC--CeEEEee-------------------cCCcEEEEECCcccceeeeee
Q psy16373        116 GACMYSIQAHDGC---IHALTYSD--SYVISLG-------------------QDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       116 ~~~~~~~~~~~~~---v~~i~~~~--~~l~~~~-------------------~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .+.+..+.....+   -..+.|+|  +.+++..                   .+.+|.+||+.+++.++++.+
T Consensus       174 ~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v  246 (462)
T 2ece_A          174 FEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL  246 (462)
T ss_dssp             CCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred             CeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence            9999888633222   34577787  5777774                   368999999999888888876

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=97.91  E-value=0.0021  Score=44.25  Aligned_cols=98  Identities=10%  Similarity=0.037  Sum_probs=67.6

Q ss_pred             ceEEEEe--cCcEEEEE-ecCCeEEEEEcc--cc-cc-----eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373         46 PITVLEC--VSNRVITG-SQDHTLKVYKLE--DQ-QL-----LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~~-~~d~~v~v~~~~--~~-~~-----~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~  114 (166)
                      ....++|  +++.++.+ +.++.|.+|++.  ++ +.     ...+.........++++++++++++...++.|..||. 
T Consensus       180 ~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-  258 (326)
T 2ghs_A          180 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-  258 (326)
T ss_dssp             SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-
T ss_pred             ccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-
Confidence            4567777  56666544 457899999986  45 32     1222223455788999999988887767788999998 


Q ss_pred             CCeeeEEeecccccEEEEEEc-C--CeEEEeec
Q psy16373        115 TGACMYSIQAHDGCIHALTYS-D--SYVISLGQ  144 (166)
Q Consensus       115 ~~~~~~~~~~~~~~v~~i~~~-~--~~l~~~~~  144 (166)
                      +++.+..+..+...+++++|. +  +.|+.++.
T Consensus       259 ~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~  291 (326)
T 2ghs_A          259 DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSA  291 (326)
T ss_dssp             TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred             CCCEEEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence            677777776666678999998 5  35544443

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=97.83  E-value=0.0012  Score=50.06  Aligned_cols=111  Identities=19%  Similarity=0.226  Sum_probs=76.7

Q ss_pred             cCcEEEEEec------CCeEEEEEcccccceehhcCC--C-----------------------------CceEEEEEcCC
Q psy16373         53 VSNRVITGSQ------DHTLKVYKLEDQQLLFTLHGH--C-----------------------------GPITTLFIDGV   95 (166)
Q Consensus        53 ~~~~l~~~~~------d~~v~v~~~~~~~~~~~~~~~--~-----------------------------~~v~~~~~~~~   95 (166)
                      .+..++.+..      ++.|..+|.++++.+.++...  .                             .....++++|+
T Consensus       161 ~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~  240 (668)
T 1kv9_A          161 VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPE  240 (668)
T ss_dssp             ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETT
T ss_pred             ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCC
Confidence            3455555543      589999999999887665421  0                             01124678887


Q ss_pred             CCEEEEecCCC-------------------cEEEEeCcCCeeeEEeec--cc-------ccE--EEEEEcC---CeEEEe
Q psy16373         96 SMMSGSGSQDG-------------------LLCVWDTVTGACMYSIQA--HD-------GCI--HALTYSD---SYVISL  142 (166)
Q Consensus        96 ~~~~~~~~~d~-------------------~v~~~d~~~~~~~~~~~~--~~-------~~v--~~i~~~~---~~l~~~  142 (166)
                      ...+..+..++                   .|..+|.++++.+..++.  |.       .+.  ..+.+..   +.++.+
T Consensus       241 ~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~  320 (668)
T 1kv9_A          241 LDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQA  320 (668)
T ss_dssp             TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEEC
T ss_pred             CCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEE
Confidence            77777777665                   399999999999888764  21       222  2333443   268899


Q ss_pred             ecCCcEEEEECCcccceeeee
Q psy16373        143 GQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       143 ~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      +.+|.++++|.++|+.+..++
T Consensus       321 ~~~G~l~~lD~~tG~~l~~~~  341 (668)
T 1kv9_A          321 PKNGFFYVLDRTNGKLISAEK  341 (668)
T ss_dssp             CTTSEEEEEETTTCCEEEEEE
T ss_pred             CCCCEEEEEECCCCCEecccc
Confidence            999999999999999886544

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=97.77  E-value=0.0004  Score=52.06  Aligned_cols=112  Identities=13%  Similarity=0.052  Sum_probs=75.8

Q ss_pred             cCcEEEEEec-CCeEEEEEc-ccccceehhcCCCC-----------ceEEEEEcCCCCE----EEEecCCCcEEEEeCcC
Q psy16373         53 VSNRVITGSQ-DHTLKVYKL-EDQQLLFTLHGHCG-----------PITTLFIDGVSMM----SGSGSQDGLLCVWDTVT  115 (166)
Q Consensus        53 ~~~~l~~~~~-d~~v~v~~~-~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~----~~~~~~d~~v~~~d~~~  115 (166)
                      .+..++.++. ++.|.-+|. .+++.+.++.....           ....+++.|.+..    ++.++.|+.+..+|.++
T Consensus        61 ~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~T  140 (599)
T 1w6s_A           61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAET  140 (599)
T ss_dssp             ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTT
T ss_pred             ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCC
Confidence            4667777777 899999999 89988766543221           0123455433333    77778899999999999


Q ss_pred             CeeeEEeecccc----cEE-EEEEcCCeEEEeec------CCcEEEEECCcccceeeeee
Q psy16373        116 GACMYSIQAHDG----CIH-ALTYSDSYVISLGQ------DERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       116 ~~~~~~~~~~~~----~v~-~i~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ++.+........    .+. ......+.++.++.      ++.|+.+|.++|+.+.++..
T Consensus       141 G~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~  200 (599)
T 1w6s_A          141 GETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA  200 (599)
T ss_dssp             CCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred             CCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence            998877643220    111 11223456666653      79999999999999988764

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=97.75  E-value=0.0023  Score=44.36  Aligned_cols=111  Identities=10%  Similarity=0.029  Sum_probs=72.6

Q ss_pred             ccCCceEEEEe--cCcEEEEEec-----CCeEEEEEcccccceehhcC------CCCceEEEEEcCC-CCEEEEec---C
Q psy16373         42 AHHQPITVLEC--VSNRVITGSQ-----DHTLKVYKLEDQQLLFTLHG------HCGPITTLFIDGV-SMMSGSGS---Q  104 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~~~~-----d~~v~v~~~~~~~~~~~~~~------~~~~v~~~~~~~~-~~~~~~~~---~  104 (166)
                      .+...+..+++  +++++++-..     +..|.+||+.+++.+..+..      +...+..++++++ +..+++..   .
T Consensus        64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~  143 (343)
T 2qe8_A           64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD  143 (343)
T ss_dssp             CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred             cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence            45567899999  3444444333     57999999998876655432      2235689999976 55556655   5


Q ss_pred             CCcEEEEeCcCCeeeEEeeccc-----------------------------ccEEEEEEcCC--eEEEeecCC-cEEEEE
Q psy16373        105 DGLLCVWDTVTGACMYSIQAHD-----------------------------GCIHALTYSDS--YVISLGQDE-RLCVWD  152 (166)
Q Consensus       105 d~~v~~~d~~~~~~~~~~~~~~-----------------------------~~v~~i~~~~~--~l~~~~~d~-~i~~wd  152 (166)
                      ++.|.+||+.+++....+..|.                             ..+..++|+|+  .|+.+..++ .+..++
T Consensus       144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~  223 (343)
T 2qe8_A          144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK  223 (343)
T ss_dssp             GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred             CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence            7899999998776655443221                             13577999983  677776655 444444

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=97.72  E-value=0.0022  Score=43.60  Aligned_cols=116  Identities=6%  Similarity=-0.102  Sum_probs=75.1

Q ss_pred             eeeccCCceEEEEe--cCc-EEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC
Q psy16373         39 STRAHHQPITVLEC--VSN-RVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT  115 (166)
Q Consensus        39 ~~~~~~~~i~~~~~--~~~-~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~  115 (166)
                      .+...........|  +++ ++++...++.|..|+.. ++ ...+..+...+..++++++++++++...++.|..|+.. 
T Consensus        39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-  115 (305)
T 3dr2_A           39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-  115 (305)
T ss_dssp             EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred             EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-
Confidence            34444455677888  566 56777778999999884 43 33444456678999999999987776666889999975 


Q ss_pred             CeeeEEeecc-----cccEEEEEEcCC-eEEE-----eec-------------CCcEEEEECCcccc
Q psy16373        116 GACMYSIQAH-----DGCIHALTYSDS-YVIS-----LGQ-------------DERLCVWDRFQGHL  158 (166)
Q Consensus       116 ~~~~~~~~~~-----~~~v~~i~~~~~-~l~~-----~~~-------------d~~i~~wd~~~~~~  158 (166)
                      ++.. .+..+     ...+..++++++ .++.     +..             .+.|..+|..+++.
T Consensus       116 g~~~-~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~  181 (305)
T 3dr2_A          116 GQAH-LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL  181 (305)
T ss_dssp             SCEE-EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC
T ss_pred             CCEE-EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE
Confidence            5432 22111     124567888873 3443     321             25678888766654

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=97.52  E-value=0.00082  Score=50.07  Aligned_cols=110  Identities=13%  Similarity=0.074  Sum_probs=74.4

Q ss_pred             cCcEEEEEec-CCeEEEEEc-ccccceehhcCCCC----------c-eEEEEEcCCCCEEEEecCCCcEEEEeCcCCeee
Q psy16373         53 VSNRVITGSQ-DHTLKVYKL-EDQQLLFTLHGHCG----------P-ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACM  119 (166)
Q Consensus        53 ~~~~l~~~~~-d~~v~v~~~-~~~~~~~~~~~~~~----------~-v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~  119 (166)
                      .+..++.++. ++.|..+|. .+++.+.++.....          . ...+.+  .+..++.++.|+.+..+|.++++.+
T Consensus        61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~  138 (571)
T 2ad6_A           61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKIN  138 (571)
T ss_dssp             ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred             ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEE
Confidence            4667777777 899999999 89988766542211          0 011223  2456777788999999999999988


Q ss_pred             EEeecccc----cEE-EEEEcCCeEEEeec------CCcEEEEECCcccceeeeee
Q psy16373        120 YSIQAHDG----CIH-ALTYSDSYVISLGQ------DERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       120 ~~~~~~~~----~v~-~i~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ........    .+. ......+.++.++.      ++.|..+|.++|+.+.++..
T Consensus       139 W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~  194 (571)
T 2ad6_A          139 WEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA  194 (571)
T ss_dssp             EEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred             EEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence            77653210    111 11123466666665      78999999999999988764

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=97.44  E-value=0.0011  Score=46.64  Aligned_cols=75  Identities=11%  Similarity=-0.082  Sum_probs=57.4

Q ss_pred             EEEcCCCCEEEEecC---------CCcEEEEeCcCCeeeEEeecccccEEEEEEcCC---eEEEee-cCCcEEEEECCcc
Q psy16373         90 LFIDGVSMMSGSGSQ---------DGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS---YVISLG-QDERLCVWDRFQG  156 (166)
Q Consensus        90 ~~~~~~~~~~~~~~~---------d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~---~l~~~~-~d~~i~~wd~~~~  156 (166)
                      +.++|++..+..+..         +..+.++|+.+.+.+..+.... ....++|+++   .+++.. .++.|.++|+.++
T Consensus       269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~  347 (368)
T 1mda_H          269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD  347 (368)
T ss_dssp             EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred             eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence            678999776665432         2356699999999988886533 5788999983   456666 5899999999999


Q ss_pred             cceeeeeec
Q psy16373        157 HLLSTIQLQ  165 (166)
Q Consensus       157 ~~~~~~~~~  165 (166)
                      +.+.++...
T Consensus       348 kvv~~I~vg  356 (368)
T 1mda_H          348 QDQSSVELD  356 (368)
T ss_dssp             EEEEECCCC
T ss_pred             cEEEEEECC
Confidence            999988754

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=97.43  E-value=0.00038  Score=48.42  Aligned_cols=111  Identities=11%  Similarity=0.153  Sum_probs=73.8

Q ss_pred             CcEEEEEecCCeEEEEEcccccceehhcCC-CCceEEEEE--cC-CCCEEEEe-cCCCcEEEEeCcCCeeeEEeecc---
Q psy16373         54 SNRVITGSQDHTLKVYKLEDQQLLFTLHGH-CGPITTLFI--DG-VSMMSGSG-SQDGLLCVWDTVTGACMYSIQAH---  125 (166)
Q Consensus        54 ~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~-~~~v~~~~~--~~-~~~~~~~~-~~d~~v~~~d~~~~~~~~~~~~~---  125 (166)
                      ++.++.++.||.|.-+|.++|+.+.++... ..++....-  .+ ++..++.. ..||.+..++..++.....+...   
T Consensus        10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv   89 (339)
T 2be1_A           10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV   89 (339)
T ss_dssp             EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence            457888999999999999999888776643 122222110  01 22334343 68999999999888655544321   


Q ss_pred             -cccEEE---EEE-------cCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        126 -DGCIHA---LTY-------SDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       126 -~~~v~~---i~~-------~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                       .+++..   ...       ..+.+++++.++.+...|+++|+.+.++..
T Consensus        90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~  139 (339)
T 2be1_A           90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP  139 (339)
T ss_dssp             TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred             eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence             112221   011       446889999999999999999999988764

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=97.11  E-value=0.026  Score=37.38  Aligned_cols=117  Identities=9%  Similarity=-0.010  Sum_probs=74.6

Q ss_pred             ceEEEEe--cCcEEEEEec---CCeEEEEEcccccceehhc-CCCCceEEEEEcCCCC-EEEEecCCCcEEEEeCcCCee
Q psy16373         46 PITVLEC--VSNRVITGSQ---DHTLKVYKLEDQQLLFTLH-GHCGPITTLFIDGVSM-MSGSGSQDGLLCVWDTVTGAC  118 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~~~~---d~~v~v~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~~~~~~~d~~v~~~d~~~~~~  118 (166)
                      ....+++  ++..|+.+..   .+.|..+++.... ...+. ........+++++++. .+++....+.|..+|......
T Consensus       123 ~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~  201 (267)
T 1npe_A          123 NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR  201 (267)
T ss_dssp             SEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE
T ss_pred             CccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce
Confidence            4567778  3566655553   3688888876332 22221 2234578999999754 556666678999999875443


Q ss_pred             eEEeecccccEEEEEEcCCeEEEee-cCCcEEEEECCcccceeeeee
Q psy16373        119 MYSIQAHDGCIHALTYSDSYVISLG-QDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       119 ~~~~~~~~~~v~~i~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ...+... .....++...+.++.+. ..+.|..+|..+++.+.++..
T Consensus       202 ~~~~~~~-~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~  247 (267)
T 1npe_A          202 RKVLEGL-QYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHP  247 (267)
T ss_dssp             EEEEECC-CSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECC
T ss_pred             EEEecCC-CCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEcc
Confidence            3333322 22356666666666666 457899999999988887754

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=97.03  E-value=0.0081  Score=44.93  Aligned_cols=109  Identities=15%  Similarity=0.060  Sum_probs=71.2

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCCCc---------eEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP---------ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ  123 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~  123 (166)
                      .+..++.++.++.|..+|.++++.+.++......         ...+.+  .+..++.++.|+.+..+|.++++.+....
T Consensus        67 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~  144 (582)
T 1flg_A           67 SDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKK  144 (582)
T ss_dssp             ETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred             ECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeec
Confidence            4666666666455999999999887766533211         011222  24566677889999999999999887765


Q ss_pred             cccc----cEE-EEEEcCC------eEEEeec------CCcEEEEECCcccceeeee
Q psy16373        124 AHDG----CIH-ALTYSDS------YVISLGQ------DERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       124 ~~~~----~v~-~i~~~~~------~l~~~~~------d~~i~~wd~~~~~~~~~~~  163 (166)
                      ....    .+. ......+      .+++++.      ++.|..+|.++|+.+.+..
T Consensus       145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~  201 (582)
T 1flg_A          145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRP  201 (582)
T ss_dssp             CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred             CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecC
Confidence            4321    111 1111223      6666653      7899999999999988664

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=97.02  E-value=0.075  Score=41.10  Aligned_cols=113  Identities=13%  Similarity=0.104  Sum_probs=76.0

Q ss_pred             CCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhc--------CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373         44 HQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLH--------GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        44 ~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~  114 (166)
                      ...|.++.. ....|..|+.++.+..|+..+++...-..        .....|.++...+++..+..|+.++-+..+|.+
T Consensus       356 ~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~  435 (795)
T 4a2l_A          356 DNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRN  435 (795)
T ss_dssp             CSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETT
T ss_pred             CCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCC
Confidence            346888888 45567788888889999987654322111        123568999988888834456666678999988


Q ss_pred             CCeeeEEee----cccccEEEEEEcC-CeEEEeecCCcEEEEECCccc
Q psy16373        115 TGACMYSIQ----AHDGCIHALTYSD-SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       115 ~~~~~~~~~----~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      +++......    .....|.++...+ +.|+.++. +.|..||..+++
T Consensus       436 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~  482 (795)
T 4a2l_A          436 SGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRS  482 (795)
T ss_dssp             TCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTE
T ss_pred             CCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCe
Confidence            765332211    1235688888876 57777776 458889887654

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.85  E-value=0.072  Score=38.31  Aligned_cols=101  Identities=13%  Similarity=0.204  Sum_probs=70.7

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCC----CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe-----------
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH----CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA-----------  117 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~-----------  117 (166)
                      ++..++.+- ++.||..++......+.+...    -..+..+..+|+|.+++..+ +..|.+..+..+.           
T Consensus        31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~  108 (452)
T 3pbp_A           31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA  108 (452)
T ss_dssp             TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred             CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence            666666543 478888888754444444332    22577899999999999875 5578888876321           


Q ss_pred             -eeEEeec------ccccEEEEEEcC-----CeEEEeecCCcEEEEECCc
Q psy16373        118 -CMYSIQA------HDGCIHALTYSD-----SYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       118 -~~~~~~~------~~~~v~~i~~~~-----~~l~~~~~d~~i~~wd~~~  155 (166)
                       ..+.+.-      ...+|..+.|+|     ..|++-..|+.|++||+..
T Consensus       109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~  158 (452)
T 3pbp_A          109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN  158 (452)
T ss_dssp             TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred             cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence             1122321      246799999999     3899999999999999986

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=96.58  E-value=0.035  Score=42.02  Aligned_cols=105  Identities=10%  Similarity=0.039  Sum_probs=63.9

Q ss_pred             cCcEEEEEecCC-----------eEEEEEccccccee--hhc-CCCCceEEEEEcCCCCEEEEecC-CCcEEEEeCcCCe
Q psy16373         53 VSNRVITGSQDH-----------TLKVYKLEDQQLLF--TLH-GHCGPITTLFIDGVSMMSGSGSQ-DGLLCVWDTVTGA  117 (166)
Q Consensus        53 ~~~~l~~~~~d~-----------~v~v~~~~~~~~~~--~~~-~~~~~v~~~~~~~~~~~~~~~~~-d~~v~~~d~~~~~  117 (166)
                      ++..++.|+.+.           .+.+||..+++...  .+. .+.....+.++..++..++.|+. +..+.+||..+.+
T Consensus       197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~  276 (656)
T 1k3i_A          197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS  276 (656)
T ss_dssp             TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred             CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence            566777776432           58889998765322  221 12233445677788899999884 4589999988764


Q ss_pred             ee--EEeecccccEEEEEE-cCCeEEEee-cC-----CcEEEEECCccc
Q psy16373        118 CM--YSIQAHDGCIHALTY-SDSYVISLG-QD-----ERLCVWDRFQGH  157 (166)
Q Consensus       118 ~~--~~~~~~~~~v~~i~~-~~~~l~~~~-~d-----~~i~~wd~~~~~  157 (166)
                      ..  ..+...+.....+.. ....++.|+ .+     ..+.+||..+.+
T Consensus       277 W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~  325 (656)
T 1k3i_A          277 WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT  325 (656)
T ss_dssp             EEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred             eeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence            33  222222223333444 335666666 33     568999997765

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=96.50  E-value=0.017  Score=43.14  Aligned_cols=89  Identities=9%  Similarity=-0.054  Sum_probs=57.5

Q ss_pred             eEEEEEccc--ccc-eehhcCCCCceEEEEEcCCCCEEEEe-cCCCcEEEEeCcCCe------------eeEEeeccccc
Q psy16373         65 TLKVYKLED--QQL-LFTLHGHCGPITTLFIDGVSMMSGSG-SQDGLLCVWDTVTGA------------CMYSIQAHDGC  128 (166)
Q Consensus        65 ~v~v~~~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~-~~d~~v~~~d~~~~~------------~~~~~~~~~~~  128 (166)
                      .|.+.|..+  ++. +..+.. .....++.++|+|++++.+ ..+.++.++|+.+.+            ....... ...
T Consensus       255 ~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~g  332 (595)
T 1fwx_A          255 GVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLG  332 (595)
T ss_dssp             TEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSC
T ss_pred             cEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCC
Confidence            366666665  322 223321 2345788999999876655 467899999998653            2333332 345


Q ss_pred             EEEEEEcC-CeEEE-eecCCcEEEEECCc
Q psy16373        129 IHALTYSD-SYVIS-LGQDERLCVWDRFQ  155 (166)
Q Consensus       129 v~~i~~~~-~~l~~-~~~d~~i~~wd~~~  155 (166)
                      ...++|++ ..+++ .-.|+.|..||+.+
T Consensus       333 P~h~aF~~dG~aY~t~~ldsqV~kwdi~~  361 (595)
T 1fwx_A          333 PLHTAFDGRGNAYTSLFLDSQVVKWNIED  361 (595)
T ss_dssp             EEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred             cceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence            67899998 44444 44599999999987

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=96.49  E-value=0.2  Score=38.67  Aligned_cols=112  Identities=4%  Similarity=-0.016  Sum_probs=74.3

Q ss_pred             CCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehh--cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373         44 HQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTL--HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY  120 (166)
Q Consensus        44 ~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~  120 (166)
                      ...|.++.. ....|..|+.++.+..++..+++.....  ......|.++...+++...+.. . +-+..+|..+++...
T Consensus       406 ~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~  483 (781)
T 3v9f_A          406 SNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGT-H-AGVFVIDLASKKVIH  483 (781)
T ss_dssp             CSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEE-T-TEEEEEESSSSSCCE
T ss_pred             CcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEE-C-CceEEEeCCCCeEEe
Confidence            456888888 4566777887778999998766543221  1134578999888888766654 3 458889987665433


Q ss_pred             Eeecc-----cccEEEEEEcC-CeEEEeecCCcEEEEECCccc
Q psy16373        121 SIQAH-----DGCIHALTYSD-SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       121 ~~~~~-----~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      .....     ...|.++...+ +.|..++.++-|..||..+++
T Consensus       484 ~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~  526 (781)
T 3v9f_A          484 HYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQL  526 (781)
T ss_dssp             EECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCE
T ss_pred             cccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCe
Confidence            22211     35688888876 577778775557788876543

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=96.39  E-value=0.2  Score=37.59  Aligned_cols=109  Identities=13%  Similarity=-0.021  Sum_probs=72.5

Q ss_pred             ceEEEEe----cCcEEEEEe------------------cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec
Q psy16373         46 PITVLEC----VSNRVITGS------------------QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS  103 (166)
Q Consensus        46 ~i~~~~~----~~~~l~~~~------------------~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~  103 (166)
                      ....+++    +++++++++                  .++.+.+.|.++.+...++.--. ....++++|++.++.+.+
T Consensus       135 ~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~  213 (595)
T 1fwx_A          135 GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTS  213 (595)
T ss_dssp             SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEE
T ss_pred             CCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEe
Confidence            3455554    677877774                  35689999999888877766322 346677899988888777


Q ss_pred             CCC--------------------------------------cEEEEeCcC--Cee-eEEeecccccEEEEEEcCC--eE-
Q psy16373        104 QDG--------------------------------------LLCVWDTVT--GAC-MYSIQAHDGCIHALTYSDS--YV-  139 (166)
Q Consensus       104 ~d~--------------------------------------~v~~~d~~~--~~~-~~~~~~~~~~v~~i~~~~~--~l-  139 (166)
                      .+.                                      .|.+.|.++  ++. +..+.. ......+.++|+  ++ 
T Consensus       214 ~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~  292 (595)
T 1fwx_A          214 YNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLC  292 (595)
T ss_dssp             SCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEE
T ss_pred             cCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEE
Confidence            553                                      366667666  433 344432 223456888884  44 


Q ss_pred             EEeecCCcEEEEECCcc
Q psy16373        140 ISLGQDERLCVWDRFQG  156 (166)
Q Consensus       140 ~~~~~d~~i~~wd~~~~  156 (166)
                      ++...+..|.++|+.+.
T Consensus       293 V~~~~s~~VsVid~~~~  309 (595)
T 1fwx_A          293 VAGKLSPTVTVLDVTRF  309 (595)
T ss_dssp             EECTTSSBEEEEEGGGH
T ss_pred             EeCCCCCeEEEEECccc
Confidence            44446889999999865

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=96.32  E-value=0.12  Score=34.42  Aligned_cols=114  Identities=15%  Similarity=0.101  Sum_probs=74.9

Q ss_pred             eeeccCCceEEEEe--cCcE-EEEEecCCeEEEEEcccccceehhcC-CCCceEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373         39 STRAHHQPITVLEC--VSNR-VITGSQDHTLKVYKLEDQQLLFTLHG-HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        39 ~~~~~~~~i~~~~~--~~~~-l~~~~~d~~v~v~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~  114 (166)
                      .+++-...+..+++  +++. +++...++.|...|.. ++.+..+.- -......+++.+++.++++.-.++.+.++++.
T Consensus        21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~   99 (255)
T 3qqz_A           21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT   99 (255)
T ss_dssp             ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred             ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence            44455567899999  3454 4557778899999998 777666532 22457888998888877776677888888876


Q ss_pred             CCee---eEEee------cccccEEEEEEcC--CeEEEeecCCcEEEEEC
Q psy16373        115 TGAC---MYSIQ------AHDGCIHALTYSD--SYVISLGQDERLCVWDR  153 (166)
Q Consensus       115 ~~~~---~~~~~------~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~  153 (166)
                      ....   +....      ......-.++|+|  +.|+++.+.....+|..
T Consensus       100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~  149 (255)
T 3qqz_A          100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV  149 (255)
T ss_dssp             TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred             CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence            4432   22221      1223457899998  47777776554455544

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=96.25  E-value=0.28  Score=37.93  Aligned_cols=111  Identities=10%  Similarity=0.041  Sum_probs=74.5

Q ss_pred             CCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhc-------CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC
Q psy16373         44 HQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLH-------GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT  115 (166)
Q Consensus        44 ~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~  115 (166)
                      ...|.++.. ....+..|+.++.+..||..+++......       .....|.++...+++...+.. .+ -+.++|..+
T Consensus       214 ~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~-Gl~~~~~~~  291 (795)
T 4a2l_A          214 TKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-FN-DLNIYHEGT  291 (795)
T ss_dssp             CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-SS-CEEEEETTT
T ss_pred             CCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-CC-hhheEcCCC
Confidence            456888887 55667777766668899987654322111       123569999998888877654 44 488899876


Q ss_pred             CeeeEEeec-------ccccEEEEEEcC-CeEEEeecCCcEEEEECCcc
Q psy16373        116 GACMYSIQA-------HDGCIHALTYSD-SYVISLGQDERLCVWDRFQG  156 (166)
Q Consensus       116 ~~~~~~~~~-------~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~  156 (166)
                      +........       ....|.++..++ +.|..|+.++-|..|+..++
T Consensus       292 ~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~  340 (795)
T 4a2l_A          292 DSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRN  340 (795)
T ss_dssp             TEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGG
T ss_pred             CeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcc
Confidence            654322111       134688998887 68888888888999987554

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=96.23  E-value=0.15  Score=34.42  Aligned_cols=104  Identities=12%  Similarity=0.107  Sum_probs=56.8

Q ss_pred             ecCcEEEEEecC-------CeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCC-----CcEEEEeCcCCe
Q psy16373         52 CVSNRVITGSQD-------HTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQD-----GLLCVWDTVTGA  117 (166)
Q Consensus        52 ~~~~~l~~~~~d-------~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~~  117 (166)
                      .++..++.|+.+       ..+.+||+.+.+..  ..+.........+.+  ++..++.|+.+     ..+.+||+.+.+
T Consensus       154 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~  231 (302)
T 2xn4_A          154 VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA  231 (302)
T ss_dssp             ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred             ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence            377777777642       45888998875432  222222222222222  46677777654     368899987664


Q ss_pred             ee--EEeecccccEEEEEEcCCeEEEeecC-----CcEEEEECCccc
Q psy16373        118 CM--YSIQAHDGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGH  157 (166)
Q Consensus       118 ~~--~~~~~~~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~  157 (166)
                      -.  ..+.........+......++.|+.+     ..+.+||+.+.+
T Consensus       232 W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  278 (302)
T 2xn4_A          232 WRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDK  278 (302)
T ss_dssp             EEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred             EeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence            32  22221122223344444566666654     348999987654

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=96.07  E-value=0.35  Score=37.35  Aligned_cols=112  Identities=7%  Similarity=0.003  Sum_probs=74.6

Q ss_pred             CceEEEEe-cCcEEEEEecCCeEEEEEcccccceehh---cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373         45 QPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTL---HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY  120 (166)
Q Consensus        45 ~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~  120 (166)
                      ..|.++.. ....|..|+.++.+..++..+++...-.   ......|.++...+++...+ |+.++-+..+|.++++...
T Consensus       363 ~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~  441 (781)
T 3v9f_A          363 KVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQI  441 (781)
T ss_dssp             SCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEE
T ss_pred             cceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEE
Confidence            45888888 4466777887778999998765432211   12346789998888877665 5555668888887665332


Q ss_pred             Eee--cccccEEEEEEcC-CeEEEeecCCcEEEEECCcccc
Q psy16373        121 SIQ--AHDGCIHALTYSD-SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus       121 ~~~--~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      ...  .....|.++...+ +.|..++. +.|..+|..+++.
T Consensus       442 ~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~  481 (781)
T 3v9f_A          442 IELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKV  481 (781)
T ss_dssp             CCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSC
T ss_pred             eccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeE
Confidence            111  1235788888876 57777776 5688899876543

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=95.81  E-value=0.22  Score=32.87  Aligned_cols=112  Identities=12%  Similarity=-0.004  Sum_probs=66.7

Q ss_pred             CceEEEEe--cCcEEEEE-ecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecC--CCcEEEEeCcCCee
Q psy16373         45 QPITVLEC--VSNRVITG-SQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQ--DGLLCVWDTVTGAC  118 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~-~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~--d~~v~~~d~~~~~~  118 (166)
                      .....+++  .+..|+.+ ...+.|.+++...................++++|+ +..+++...  .+.|..+++... .
T Consensus        79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~  157 (267)
T 1npe_A           79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-N  157 (267)
T ss_dssp             CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-C
T ss_pred             CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-C
Confidence            35677888  34555544 45688999998643221111212245689999996 444555433  468888887533 2


Q ss_pred             eEEee-cccccEEEEEEcC--CeEEEee-cCCcEEEEECCccc
Q psy16373        119 MYSIQ-AHDGCIHALTYSD--SYVISLG-QDERLCVWDRFQGH  157 (166)
Q Consensus       119 ~~~~~-~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~~~~  157 (166)
                      ...+. ..-.....+++++  +.|+.+. ..+.|..+|.....
T Consensus       158 ~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~  200 (267)
T 1npe_A          158 RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG  200 (267)
T ss_dssp             CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred             cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc
Confidence            22222 2223567899987  4565555 46789999986543

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=95.80  E-value=0.24  Score=33.32  Aligned_cols=104  Identities=10%  Similarity=0.143  Sum_probs=55.9

Q ss_pred             ecCcEEEEEecCC-----eEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCC-------CcEEEEeCcCCe
Q psy16373         52 CVSNRVITGSQDH-----TLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQD-------GLLCVWDTVTGA  117 (166)
Q Consensus        52 ~~~~~l~~~~~d~-----~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d-------~~v~~~d~~~~~  117 (166)
                      +++..++.|+.++     .+.+||+.+.+..  ..+...........+  ++..++.|+.+       ..+..||+.+.+
T Consensus       107 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~  184 (302)
T 2xn4_A          107 LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE  184 (302)
T ss_dssp             ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred             ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence            3777777777553     5778888765432  222211222222222  45666666543       358889987664


Q ss_pred             ee--EEeecccccEEEEEEcCCeEEEeecC-----CcEEEEECCccc
Q psy16373        118 CM--YSIQAHDGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGH  157 (166)
Q Consensus       118 ~~--~~~~~~~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~  157 (166)
                      -.  ..+.........+.+....++.|+.+     ..+.+||+.+.+
T Consensus       185 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~  231 (302)
T 2xn4_A          185 WTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNA  231 (302)
T ss_dssp             EEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred             EEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCC
Confidence            32  22222222333344444566666653     468899987654

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=95.72  E-value=0.32  Score=34.08  Aligned_cols=108  Identities=10%  Similarity=0.182  Sum_probs=74.4

Q ss_pred             EEEEEecCCeEEEEEcc-------cccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc-----CCeeeEEee
Q psy16373         56 RVITGSQDHTLKVYKLE-------DQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV-----TGACMYSIQ  123 (166)
Q Consensus        56 ~l~~~~~d~~v~v~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~-----~~~~~~~~~  123 (166)
                      +++....+|.+..|++.       +.+.++++.. .+.+..+...+....+..+-++.-|..++.+     ++..+..+.
T Consensus       145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~  223 (355)
T 3amr_A          145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRAD  223 (355)
T ss_dssp             EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBS
T ss_pred             EEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEec
Confidence            57788888999999983       3455666663 4578888899887888888888777777754     234454442


Q ss_pred             -c-ccccEEEEEE--cC---CeEEEee-cCCcEEEEECC-cccceeeeee
Q psy16373        124 -A-HDGCIHALTY--SD---SYVISLG-QDERLCVWDRF-QGHLLSTIQL  164 (166)
Q Consensus       124 -~-~~~~v~~i~~--~~---~~l~~~~-~d~~i~~wd~~-~~~~~~~~~~  164 (166)
                       + ....+..|+.  .+   .+|++++ .++.+.+||.. +.+.+..|.+
T Consensus       224 ~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~I  273 (355)
T 3amr_A          224 GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFRI  273 (355)
T ss_dssp             SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEEE
T ss_pred             CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEEe
Confidence             1 1235666766  33   3666666 57799999996 6677777754

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=95.53  E-value=0.61  Score=36.03  Aligned_cols=107  Identities=12%  Similarity=0.018  Sum_probs=62.6

Q ss_pred             EEEe--cCcEEEEEecC-----CeEEEEEcccccce--ehhc-CCCCceEEEEEcCCCCEEEEecC---CCcEEEEeCcC
Q psy16373         49 VLEC--VSNRVITGSQD-----HTLKVYKLEDQQLL--FTLH-GHCGPITTLFIDGVSMMSGSGSQ---DGLLCVWDTVT  115 (166)
Q Consensus        49 ~~~~--~~~~l~~~~~d-----~~v~v~~~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~~~~~~---d~~v~~~d~~~  115 (166)
                      .+.|  +++.|+....+     ..|.++++.++...  ..+. ........+.++|++++++....   ...+.++|+.+
T Consensus       225 ~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~  304 (751)
T 2xe4_A          225 EIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK  304 (751)
T ss_dssp             CCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred             eEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence            4667  67777766654     36788888765422  2222 22234567899999998876542   34688889876


Q ss_pred             Ce-ee--EEe-ecccccEEEEEEcC-CeEEEe-ecC----CcEEEEECCc
Q psy16373        116 GA-CM--YSI-QAHDGCIHALTYSD-SYVISL-GQD----ERLCVWDRFQ  155 (166)
Q Consensus       116 ~~-~~--~~~-~~~~~~v~~i~~~~-~~l~~~-~~d----~~i~~wd~~~  155 (166)
                      +. ..  ..+ .........+.|+. +.|+.. ..+    ..|..+|+.+
T Consensus       305 ~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~  354 (751)
T 2xe4_A          305 GNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ  354 (751)
T ss_dssp             CTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred             CCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence            52 12  333 22345566677554 444433 333    3577777764

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=95.40  E-value=0.35  Score=32.46  Aligned_cols=105  Identities=10%  Similarity=0.085  Sum_probs=58.0

Q ss_pred             ecCcEEEEEecC-----CeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCC-----CcEEEEeCcCCeee
Q psy16373         52 CVSNRVITGSQD-----HTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQD-----GLLCVWDTVTGACM  119 (166)
Q Consensus        52 ~~~~~l~~~~~d-----~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~~~~  119 (166)
                      .++..++.|+.+     ..+.+||+.+.+..  ..+.........+.+  ++..++.|+.+     ..+.+||+.+.+-.
T Consensus       158 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~  235 (301)
T 2vpj_A          158 ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWT  235 (301)
T ss_dssp             ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred             ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEE
Confidence            377777777654     46888998765432  222211222222333  45677777654     46889998866432


Q ss_pred             --EEeecccccEEEEEEcCCeEEEeecC-----CcEEEEECCcccc
Q psy16373        120 --YSIQAHDGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGHL  158 (166)
Q Consensus       120 --~~~~~~~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~~  158 (166)
                        ..+.........+.+....++.++.+     ..+.+||+.+.+.
T Consensus       236 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W  281 (301)
T 2vpj_A          236 TVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSW  281 (301)
T ss_dssp             EECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred             ECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence              22222222233344444566666654     4678899876543

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=95.33  E-value=0.47  Score=33.47  Aligned_cols=119  Identities=9%  Similarity=-0.024  Sum_probs=69.7

Q ss_pred             CceEEEEe--cCcEEEEEe-cC-CeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeee
Q psy16373         45 QPITVLEC--VSNRVITGS-QD-HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACM  119 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~-~d-~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~  119 (166)
                      .....+++  .+..|+... .. +.|...+...................++++|+ +.++++-...+.|..+|+......
T Consensus       202 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~  281 (386)
T 3v65_B          202 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK  281 (386)
T ss_dssp             SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE
T ss_pred             CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE
Confidence            34567777  344444443 34 67888877643222222222334689999976 555566566788999998643322


Q ss_pred             EEeecccccEEEEEEcCCeEEEe-ecCCcEEEEECCcccceeeee
Q psy16373        120 YSIQAHDGCIHALTYSDSYVISL-GQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       120 ~~~~~~~~~v~~i~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      ..+.........+++..+.++.+ ...+.|..+|..+++.+..+.
T Consensus       282 ~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~  326 (386)
T 3v65_B          282 AVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR  326 (386)
T ss_dssp             EEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             EEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence            22222223445666666555444 456788888877777666654

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=95.12  E-value=0.45  Score=32.06  Aligned_cols=105  Identities=12%  Similarity=0.069  Sum_probs=57.1

Q ss_pred             EecCcEEEEEecC----CeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCC------CcEEEEeCcCCee
Q psy16373         51 ECVSNRVITGSQD----HTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQD------GLLCVWDTVTGAC  118 (166)
Q Consensus        51 ~~~~~~l~~~~~d----~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d------~~v~~~d~~~~~~  118 (166)
                      ..++..++.|+.+    ..+.+||..+.+..  ..+......-....+  ++..++.|+.+      ..+.+||+.+.+-
T Consensus        53 ~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W  130 (306)
T 3ii7_A           53 FWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESW  130 (306)
T ss_dssp             EETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred             EECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCce
Confidence            3477777777754    67888998876432  222221222222222  46677777654      4688899887643


Q ss_pred             eE--EeecccccEEEEEEcCCeEEEeec---------CCcEEEEECCccc
Q psy16373        119 MY--SIQAHDGCIHALTYSDSYVISLGQ---------DERLCVWDRFQGH  157 (166)
Q Consensus       119 ~~--~~~~~~~~v~~i~~~~~~l~~~~~---------d~~i~~wd~~~~~  157 (166)
                      ..  .+.........+......++.|+.         -..+.+||+.+.+
T Consensus       131 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~  180 (306)
T 3ii7_A          131 HTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET  180 (306)
T ss_dssp             EEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTE
T ss_pred             EeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCe
Confidence            22  222222222333444445555543         3458889887764

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=94.95  E-value=0.7  Score=33.39  Aligned_cols=106  Identities=10%  Similarity=0.080  Sum_probs=68.8

Q ss_pred             ceEEEEe--cCcEEEEEecCCeEEEEEcccccce------------ehhcC------CCCceEEEEEcCC---CCEEEEe
Q psy16373         46 PITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL------------FTLHG------HCGPITTLFIDGV---SMMSGSG  102 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~------------~~~~~------~~~~v~~~~~~~~---~~~~~~~  102 (166)
                      .|..+..  +|++|+..+ +..|.|..+..+...            +.+.-      ...+|..+.|||-   +..+++-
T Consensus        67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL  145 (452)
T 3pbp_A           67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL  145 (452)
T ss_dssp             TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred             ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence            4666666  777877765 568899888732110            11111      2467999999997   5678888


Q ss_pred             cCCCcEEEEeCcCC--eeeEEee---------cccccEEEEEEcCC----eEEEeecCCcEEEEEC
Q psy16373        103 SQDGLLCVWDTVTG--ACMYSIQ---------AHDGCIHALTYSDS----YVISLGQDERLCVWDR  153 (166)
Q Consensus       103 ~~d~~v~~~d~~~~--~~~~~~~---------~~~~~v~~i~~~~~----~l~~~~~d~~i~~wd~  153 (166)
                      ..|+.|++||+...  ++. .+.         .....|.+++|.++    ++++.+.+|.|+....
T Consensus       146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlcP  210 (452)
T 3pbp_A          146 KEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFYP  210 (452)
T ss_dssp             ETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEESS
T ss_pred             ecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEECC
Confidence            99999999999753  222 232         12256888999874    3444557777765543

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=94.91  E-value=0.24  Score=38.18  Aligned_cols=109  Identities=7%  Similarity=-0.057  Sum_probs=64.0

Q ss_pred             ceEEEEe---cCcEEEEEec-C----CeEEEEEcccc-cceehhcCCCCceEEEEEcCCCCEEEEecCC-----CcEEEE
Q psy16373         46 PITVLEC---VSNRVITGSQ-D----HTLKVYKLEDQ-QLLFTLHGHCGPITTLFIDGVSMMSGSGSQD-----GLLCVW  111 (166)
Q Consensus        46 ~i~~~~~---~~~~l~~~~~-d----~~v~v~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~~~  111 (166)
                      .+...+|   ++++|+.+.. +    ..|+++|+.++ +.+...  -......+.|+|+++.++....+     ..|..+
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~--~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~  252 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK--VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH  252 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC--EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc--ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence            4444555   5666664432 3    35999999988 632210  01123468899998877666554     257778


Q ss_pred             eCcCCee--eEEee-cccccEEEEEEcCC--eEEEee---cCCcEEEEECCcc
Q psy16373        112 DTVTGAC--MYSIQ-AHDGCIHALTYSDS--YVISLG---QDERLCVWDRFQG  156 (166)
Q Consensus       112 d~~~~~~--~~~~~-~~~~~v~~i~~~~~--~l~~~~---~d~~i~~wd~~~~  156 (166)
                      ++.++..  ...+. ........+.|+|+  +|+...   ....|.++|+.++
T Consensus       253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~  305 (751)
T 2xe4_A          253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG  305 (751)
T ss_dssp             ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred             ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence            8876532  22222 22234567889984  444433   2456888898775

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=94.83  E-value=0.57  Score=31.83  Aligned_cols=109  Identities=13%  Similarity=0.027  Sum_probs=68.9

Q ss_pred             ceEEEEec--CcEEEEEecCCeEEEEEcccccc--eehh-cC-CCCceEEEEEcC-CCCEEEEecC--------------
Q psy16373         46 PITVLECV--SNRVITGSQDHTLKVYKLEDQQL--LFTL-HG-HCGPITTLFIDG-VSMMSGSGSQ--------------  104 (166)
Q Consensus        46 ~i~~~~~~--~~~l~~~~~d~~v~v~~~~~~~~--~~~~-~~-~~~~v~~~~~~~-~~~~~~~~~~--------------  104 (166)
                      ....++++  +..|+.+...+.+..+|..+++.  +... .+ .......+++.+ +++.+++...              
T Consensus        81 ~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~  160 (322)
T 2fp8_A           81 RTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDT  160 (322)
T ss_dssp             CEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHH
T ss_pred             CCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcc
Confidence            46788883  56777776666788888775532  1111 11 113468899999 8888776532              


Q ss_pred             ---CCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEe-ecCCcEEEEECCc
Q psy16373        105 ---DGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISL-GQDERLCVWDRFQ  155 (166)
Q Consensus       105 ---d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~-~~d~~i~~wd~~~  155 (166)
                         ++.+..+|..+++....... -.....++++++  .|+.+ ...+.|..|++..
T Consensus       161 ~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~  216 (322)
T 2fp8_A          161 SDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG  216 (322)
T ss_dssp             TCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred             cCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence               36788888776654322221 123456889884  56555 4568899999874

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=94.80  E-value=0.58  Score=31.77  Aligned_cols=106  Identities=14%  Similarity=-0.017  Sum_probs=65.3

Q ss_pred             EEEEe--cCcEEEEE-ecCCeEEEEEcccccc--eehhcCCCCceEEEEEcCCCCEEEEecC----------CCcEEEEe
Q psy16373         48 TVLEC--VSNRVITG-SQDHTLKVYKLEDQQL--LFTLHGHCGPITTLFIDGVSMMSGSGSQ----------DGLLCVWD  112 (166)
Q Consensus        48 ~~~~~--~~~~l~~~-~~d~~v~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~----------d~~v~~~d  112 (166)
                      +.+++  +++.|+.+ ...+.|.++++.....  ...+....+ ...+++.++|+++++...          .+.|..+|
T Consensus       188 ~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d  266 (322)
T 2fp8_A          188 GGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFD  266 (322)
T ss_dssp             CEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEEC
T ss_pred             cceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEEC
Confidence            45677  55655555 4568999999874211  111111123 678999999988777654          45688888


Q ss_pred             CcCCeeeEEeeccc----ccEEEEEEcCCeEEEee-cCCcEEEEECCc
Q psy16373        113 TVTGACMYSIQAHD----GCIHALTYSDSYVISLG-QDERLCVWDRFQ  155 (166)
Q Consensus       113 ~~~~~~~~~~~~~~----~~v~~i~~~~~~l~~~~-~d~~i~~wd~~~  155 (166)
                      . .++.+..+....    ..++.+++..+.|+.++ ..+.|..+++..
T Consensus       267 ~-~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~  313 (322)
T 2fp8_A          267 E-FGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDK  313 (322)
T ss_dssp             T-TSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC--
T ss_pred             C-CCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEeccc
Confidence            6 466666665432    24566666666555554 567898888754

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=94.68  E-value=0.61  Score=31.50  Aligned_cols=104  Identities=8%  Similarity=0.033  Sum_probs=56.5

Q ss_pred             ecCcEEEEEecC-----CeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCC-----CcEEEEeCcCCeee
Q psy16373         52 CVSNRVITGSQD-----HTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQD-----GLLCVWDTVTGACM  119 (166)
Q Consensus        52 ~~~~~l~~~~~d-----~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~~~~  119 (166)
                      .++..++.|+.+     ..+.+||..+.+..  ..+......-....+  ++..++.|+.+     ..+..||+.+.+-.
T Consensus       120 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~  197 (308)
T 1zgk_A          120 IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWR  197 (308)
T ss_dssp             ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred             ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEe
Confidence            377777777643     46788898765432  222211222222223  46677777654     45888998766432


Q ss_pred             --EEeecccccEEEEEEcCCeEEEeecC-----CcEEEEECCccc
Q psy16373        120 --YSIQAHDGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGH  157 (166)
Q Consensus       120 --~~~~~~~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~  157 (166)
                        ..+.........+.+....++.|+.+     ..+.+||+.+.+
T Consensus       198 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~  242 (308)
T 1zgk_A          198 MITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETET  242 (308)
T ss_dssp             ECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred             eCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence              22222222233344444566666554     568899987654

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=94.64  E-value=0.28  Score=37.63  Aligned_cols=115  Identities=10%  Similarity=-0.011  Sum_probs=63.5

Q ss_pred             EEEEe--cCcEEEEEec--CCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeEEe
Q psy16373         48 TVLEC--VSNRVITGSQ--DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMYSI  122 (166)
Q Consensus        48 ~~~~~--~~~~l~~~~~--d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~~~  122 (166)
                      ..+++  .+..|+.+..  .+.|.+.++........+.......+.|+++|+ +.++++-...+.|..+++.... ...+
T Consensus       499 ~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~  577 (699)
T 1n7d_A          499 RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTI  577 (699)
T ss_dssp             CCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEE
T ss_pred             ceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEE
Confidence            45555  2344443332  266776666532211111112234578999987 5566666677889999986432 2222


Q ss_pred             ec---ccccEEEEEEcCCe-EEEeecCCcEEEEECCcccceeeee
Q psy16373        123 QA---HDGCIHALTYSDSY-VISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       123 ~~---~~~~v~~i~~~~~~-l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      ..   .-.....|++..+. +++....+.|..+|..+++.+..+.
T Consensus       578 ~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~  622 (699)
T 1n7d_A          578 LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA  622 (699)
T ss_dssp             CCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred             EecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEee
Confidence            21   11222345555654 4455556889999988887766554

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=94.58  E-value=0.63  Score=31.19  Aligned_cols=104  Identities=14%  Similarity=0.132  Sum_probs=56.7

Q ss_pred             ecCcEEEEEecC-----CeEEEEEccccc---c--eehhcCCCCceEEEEEcCCCCEEEEecCC-----CcEEEEeCcCC
Q psy16373         52 CVSNRVITGSQD-----HTLKVYKLEDQQ---L--LFTLHGHCGPITTLFIDGVSMMSGSGSQD-----GLLCVWDTVTG  116 (166)
Q Consensus        52 ~~~~~l~~~~~d-----~~v~v~~~~~~~---~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~  116 (166)
                      .++..++.|+.+     ..+.+||..+.+   .  +..+......-....+  ++..++.|+.+     ..+.++|+.+.
T Consensus        61 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~  138 (301)
T 2vpj_A           61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNID  138 (301)
T ss_dssp             ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred             ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCC
Confidence            377777777754     468899988765   2  2222211222222222  46677777644     35888898765


Q ss_pred             ee--eEEeecccccEEEEEEcCCeEEEeecC-----CcEEEEECCccc
Q psy16373        117 AC--MYSIQAHDGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGH  157 (166)
Q Consensus       117 ~~--~~~~~~~~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~  157 (166)
                      +.  +..+.........+.+....++.|+.+     ..+..||+.+.+
T Consensus       139 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~  186 (301)
T 2vpj_A          139 QWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGH  186 (301)
T ss_dssp             EEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred             eEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCc
Confidence            43  333322222233344444555666543     458888887654

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=94.36  E-value=0.61  Score=30.56  Aligned_cols=100  Identities=8%  Similarity=-0.015  Sum_probs=58.5

Q ss_pred             CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCce--------EEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373         45 QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPI--------TTLFIDGVSMMSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v--------~~~~~~~~~~~~~~~~~d~~v~~~d~~  114 (166)
                      ..+..++|  ++. |... .++.+.-.+..+.....-+.. ...|        .++.|.|++.+.++  .||.|.-++..
T Consensus        41 ~~~~~laf~P~G~-LYaV-~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP  115 (236)
T 1tl2_A           41 SNFKFLFLSPGGE-LYGV-LNDKIYKGTPPTHDNDNWMGR-AKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPP  115 (236)
T ss_dssp             TTCSEEEECTTSC-EEEE-ETTEEEEESCCCSTTCCHHHH-CEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred             ccceeEEECCCcc-EEEE-eCCeEEEECCCCCCccccccc-ccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence            46778998  455 4444 777766666544222111111 1222        67889999999888  56988877753


Q ss_pred             CCee---e--EEeec--ccccEEEEEEcC-CeEEEeecCCcEEE
Q psy16373        115 TGAC---M--YSIQA--HDGCIHALTYSD-SYVISLGQDERLCV  150 (166)
Q Consensus       115 ~~~~---~--~~~~~--~~~~v~~i~~~~-~~l~~~~~d~~i~~  150 (166)
                      +...   +  ....+  -=..+..|.|.| ..|+... |+.++-
T Consensus       116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr  158 (236)
T 1tl2_A          116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYK  158 (236)
T ss_dssp             CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEE
T ss_pred             cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEe
Confidence            3211   0  01111  113678899998 5777777 887543

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=94.32  E-value=0.81  Score=31.37  Aligned_cols=108  Identities=10%  Similarity=0.002  Sum_probs=62.9

Q ss_pred             CCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhc----CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee
Q psy16373         44 HQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLH----GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC  118 (166)
Q Consensus        44 ~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~  118 (166)
                      ...+..+.+ .+..++.++.+|.+.+.+...++.-..+.    .....+.++.+.+++..++.+. ++.+ .+....++.
T Consensus       204 ~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~t  281 (327)
T 2xbg_A          204 SRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQT  281 (327)
T ss_dssp             SSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSS
T ss_pred             CCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcc
Confidence            456777877 33445566677887776433232222121    1223578898988777777654 6656 333333433


Q ss_pred             eEEee---cccccEEEEEEc-CCeEEEeecCCcEEEEEC
Q psy16373        119 MYSIQ---AHDGCIHALTYS-DSYVISLGQDERLCVWDR  153 (166)
Q Consensus       119 ~~~~~---~~~~~v~~i~~~-~~~l~~~~~d~~i~~wd~  153 (166)
                      -..+.   .....+.++.|. ++.++.++.+|.|.-++-
T Consensus       282 W~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~  320 (327)
T 2xbg_A          282 WQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT  320 (327)
T ss_dssp             CEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred             cEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence            23232   123456778885 467888888998776653

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=94.31  E-value=0.86  Score=31.62  Aligned_cols=107  Identities=9%  Similarity=-0.070  Sum_probs=64.5

Q ss_pred             EEEEe---cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCC-CcEEEEeCcCCeeeEEe
Q psy16373         48 TVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQD-GLLCVWDTVTGACMYSI  122 (166)
Q Consensus        48 ~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d-~~v~~~d~~~~~~~~~~  122 (166)
                      ..+++   .+.+.++-...+.|.+.+.........+.........++++|. +.++.+-... +.|...++.... ...+
T Consensus       119 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~  197 (349)
T 3v64_C          119 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRII  197 (349)
T ss_dssp             CEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEES
T ss_pred             cEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEE
Confidence            45555   3445555556788999988754322222233355789999986 5555555555 788888875432 2222


Q ss_pred             -ecccccEEEEEEcC--CeEEEee-cCCcEEEEECCc
Q psy16373        123 -QAHDGCIHALTYSD--SYVISLG-QDERLCVWDRFQ  155 (166)
Q Consensus       123 -~~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~~  155 (166)
                       ...-...+.+++++  +.|+.+. ..+.|..+|+..
T Consensus       198 ~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG  234 (349)
T 3v64_C          198 ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG  234 (349)
T ss_dssp             CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             EECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence             22223467899986  4555554 456788888753

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=94.19  E-value=1.1  Score=32.22  Aligned_cols=109  Identities=7%  Similarity=0.006  Sum_probs=64.7

Q ss_pred             CCceEEEEe--cCcEEEEEecC----C-eEEEEEcccccce--ehhcCCCCceEEEEEcC-CCCEEEEecCCCcEEEEeC
Q psy16373         44 HQPITVLEC--VSNRVITGSQD----H-TLKVYKLEDQQLL--FTLHGHCGPITTLFIDG-VSMMSGSGSQDGLLCVWDT  113 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~~~~~d----~-~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~  113 (166)
                      ......+++  +++.|+.+...    . .+.+.+. .+...  ..+. .......++++| ++..+++-..++.|..++.
T Consensus       178 ~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~  255 (430)
T 3tc9_A          178 LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDF  255 (430)
T ss_dssp             CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEET
T ss_pred             CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence            345677888  67756655541    1 3333343 33222  1222 123457788999 6887877777889999998


Q ss_pred             cCCeeeEEeec-ccccEEEEEEcC--CeEEEee-cCCcEEEEECC
Q psy16373        114 VTGACMYSIQA-HDGCIHALTYSD--SYVISLG-QDERLCVWDRF  154 (166)
Q Consensus       114 ~~~~~~~~~~~-~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~  154 (166)
                      ..+........ .......++|+|  ++|+.+. ..+.|..++..
T Consensus       256 ~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d  300 (430)
T 3tc9_A          256 TTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD  300 (430)
T ss_dssp             TTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             CCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence            76654222221 123457899998  4455554 56788887754

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=93.93  E-value=1  Score=31.20  Aligned_cols=119  Identities=9%  Similarity=-0.033  Sum_probs=69.5

Q ss_pred             CceEEEEec--CcEEEEE-ecC-CeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeee
Q psy16373         45 QPITVLECV--SNRVITG-SQD-HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACM  119 (166)
Q Consensus        45 ~~i~~~~~~--~~~l~~~-~~d-~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~  119 (166)
                      .....++++  +..|+.. ... +.|...+.................+.++++|+ +.++++-...+.|..+|+......
T Consensus       159 ~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~  238 (349)
T 3v64_C          159 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK  238 (349)
T ss_dssp             SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred             CCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceE
Confidence            345677772  4444443 344 77888887643222222222345689999976 555555566778999998643322


Q ss_pred             EEeecccccEEEEEEcCCeEEEee-cCCcEEEEECCcccceeeee
Q psy16373        120 YSIQAHDGCIHALTYSDSYVISLG-QDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       120 ~~~~~~~~~v~~i~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~  163 (166)
                      ..+...-.....+++..+.++.+. ..+.|..+|..+|+.+..+.
T Consensus       239 ~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~  283 (349)
T 3v64_C          239 AVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR  283 (349)
T ss_dssp             EEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             EEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence            222222233456666666555554 56778888876777666554

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=93.70  E-value=1.2  Score=31.30  Aligned_cols=110  Identities=8%  Similarity=-0.091  Sum_probs=65.7

Q ss_pred             CceEEEEe--cCcE-EEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373         45 QPITVLEC--VSNR-VITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMY  120 (166)
Q Consensus        45 ~~i~~~~~--~~~~-l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~  120 (166)
                      .....++|  .++. +++-...+.|..++.........+.........+++++. +..+++-...+.|.+.++.......
T Consensus       116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~  195 (386)
T 3v65_B          116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV  195 (386)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred             CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence            34677888  3344 445456788999998765433222222334567888875 5566666667788888876443222


Q ss_pred             EeecccccEEEEEEcC--CeEEEeec-C-CcEEEEECC
Q psy16373        121 SIQAHDGCIHALTYSD--SYVISLGQ-D-ERLCVWDRF  154 (166)
Q Consensus       121 ~~~~~~~~v~~i~~~~--~~l~~~~~-d-~~i~~wd~~  154 (166)
                      .+...-.....++++|  ..|+.+.. . +.|...++.
T Consensus       196 l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d  233 (386)
T 3v65_B          196 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD  233 (386)
T ss_dssp             EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred             eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence            2322224567888886  45555443 3 567777764

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=93.52  E-value=1.1  Score=30.20  Aligned_cols=105  Identities=10%  Similarity=0.076  Sum_probs=57.7

Q ss_pred             ecCcEEEEEecC-----CeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCC-----CcEEEEeCcCCeee
Q psy16373         52 CVSNRVITGSQD-----HTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQD-----GLLCVWDTVTGACM  119 (166)
Q Consensus        52 ~~~~~l~~~~~d-----~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~~~~  119 (166)
                      +++..++.|+.+     ..+.+||+.+.+..  ..+.........+.+  ++..++.|+.+     ..+.+||+.+.+-.
T Consensus       167 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~  244 (308)
T 1zgk_A          167 LNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWT  244 (308)
T ss_dssp             ETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred             ECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence            377777777654     45888998765432  222211222223333  56677777654     46889998766432


Q ss_pred             --EEeecccccEEEEEEcCCeEEEeecC-----CcEEEEECCcccc
Q psy16373        120 --YSIQAHDGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGHL  158 (166)
Q Consensus       120 --~~~~~~~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~~  158 (166)
                        ..+.........+......++.|+.+     ..+.+||+.+.+-
T Consensus       245 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W  290 (308)
T 1zgk_A          245 FVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTW  290 (308)
T ss_dssp             ECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred             ECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence              22222222233344444566666643     4678899877543

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=93.49  E-value=1.2  Score=30.50  Aligned_cols=118  Identities=8%  Similarity=0.001  Sum_probs=69.8

Q ss_pred             CceEEEEe--cCcEEEEEe--cCCeEEEEEcccccceehh-cCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCee
Q psy16373         45 QPITVLEC--VSNRVITGS--QDHTLKVYKLEDQQLLFTL-HGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGAC  118 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~--~d~~v~v~~~~~~~~~~~~-~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~  118 (166)
                      .....+++  .+..|+.+.  ..+.|...+..... ...+ ...-...+.++++++ +..+++-...+.|..+|+.....
T Consensus       122 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~  200 (318)
T 3sov_A          122 DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR  200 (318)
T ss_dssp             SSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred             CCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce
Confidence            34567777  344555544  35778888776322 2222 222344689999986 55555556678999999864322


Q ss_pred             eEEeecccccEEEEEEcCCeE-EEeecCCcEEEEECCcccceeeee
Q psy16373        119 MYSIQAHDGCIHALTYSDSYV-ISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       119 ~~~~~~~~~~v~~i~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      .............+++..+.+ ++-...+.|..+|..+|+.+..+.
T Consensus       201 ~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~  246 (318)
T 3sov_A          201 QAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH  246 (318)
T ss_dssp             EEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             EEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence            222222223445666666544 444456789999988887766554

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=93.29  E-value=1.2  Score=30.05  Aligned_cols=105  Identities=5%  Similarity=0.005  Sum_probs=56.8

Q ss_pred             ecCcEEEEEec------CCeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCCC-----cEEEEeCcCCee
Q psy16373         52 CVSNRVITGSQ------DHTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQDG-----LLCVWDTVTGAC  118 (166)
Q Consensus        52 ~~~~~l~~~~~------d~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d~-----~v~~~d~~~~~~  118 (166)
                      .++..++.|+.      -..+.+||..+.+-.  ..+......-....+  ++..++.|+.++     .+.+||+.+.+-
T Consensus       147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W  224 (315)
T 4asc_A          147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKW  224 (315)
T ss_dssp             ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred             ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeE
Confidence            47777777775      246888998875432  222211212222223  456777776544     577889876643


Q ss_pred             e--EEeecccccEEEEEEcCCeEEEeecC--------------CcEEEEECCcccc
Q psy16373        119 M--YSIQAHDGCIHALTYSDSYVISLGQD--------------ERLCVWDRFQGHL  158 (166)
Q Consensus       119 ~--~~~~~~~~~v~~i~~~~~~l~~~~~d--------------~~i~~wd~~~~~~  158 (166)
                      .  ..+.........+.+....++.|+.+              ..+.+||+.+.+-
T Consensus       225 ~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W  280 (315)
T 4asc_A          225 APFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW  280 (315)
T ss_dssp             EEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred             EECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence            2  22222222333444455566666653              2477888876643

>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A

Probab=93.14  E-value=0.19  Score=38.61  Aligned_cols=37  Identities=24%  Similarity=0.450  Sum_probs=31.8

Q ss_pred             cEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        128 CIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       128 ~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .|.++.+...++++-+.|+++|+||+++++++.+..+
T Consensus       223 ~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL  259 (729)
T 3f7f_A          223 VISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM  259 (729)
T ss_dssp             EEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred             eEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence            4666677778999999999999999999999887765

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=93.10  E-value=1.3  Score=29.74  Aligned_cols=105  Identities=10%  Similarity=0.054  Sum_probs=56.0

Q ss_pred             EecCcEEEEEecC------CeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecC---------CCcEEEEeC
Q psy16373         51 ECVSNRVITGSQD------HTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQ---------DGLLCVWDT  113 (166)
Q Consensus        51 ~~~~~~l~~~~~d------~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~---------d~~v~~~d~  113 (166)
                      ..++..++.|+.+      ..+.+||..+.+..  ..+......-..+.+  ++..++.|+.         -..+.+||+
T Consensus        99 ~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~  176 (306)
T 3ii7_A           99 AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDP  176 (306)
T ss_dssp             EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEET
T ss_pred             EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCC
Confidence            3377777777765      46888998876432  222211111222222  4566666653         345888998


Q ss_pred             cCCee--eEEeecccccEEEEEEcCCeEEEeecC-----CcEEEEECCccc
Q psy16373        114 VTGAC--MYSIQAHDGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGH  157 (166)
Q Consensus       114 ~~~~~--~~~~~~~~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~  157 (166)
                      .+.+-  +..+.........+......++.|+.+     ..+.+||+.+.+
T Consensus       177 ~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~  227 (306)
T 3ii7_A          177 ATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNE  227 (306)
T ss_dssp             TTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred             CCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence            76643  222222222233344444555555543     458888887654

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=93.08  E-value=0.64  Score=35.67  Aligned_cols=102  Identities=13%  Similarity=-0.020  Sum_probs=57.1

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCC-CcEEEEeCcCCeeeEEee-cccccE
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQD-GLLCVWDTVTGACMYSIQ-AHDGCI  129 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d-~~v~~~d~~~~~~~~~~~-~~~~~v  129 (166)
                      .++++++-...+.|.+.++........+.........++++|. +.++++-... +.|...++.... ...+. ..-...
T Consensus       464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~P  542 (699)
T 1n7d_A          464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWP  542 (699)
T ss_dssp             SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSC
T ss_pred             CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCc
Confidence            3445555556788999988754332222222344578889886 4444443222 677777764322 22221 112234


Q ss_pred             EEEEEcC--CeEEEee-cCCcEEEEECCc
Q psy16373        130 HALTYSD--SYVISLG-QDERLCVWDRFQ  155 (166)
Q Consensus       130 ~~i~~~~--~~l~~~~-~d~~i~~wd~~~  155 (166)
                      +.|+|++  +.|+.+. ..+.|..+++..
T Consensus       543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG  571 (699)
T 1n7d_A          543 NGITLDLLSGRLYWVDSKLHSISSIDVNG  571 (699)
T ss_dssp             CCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred             cEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence            5788886  3555444 456788888753

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=92.59  E-value=1.8  Score=30.07  Aligned_cols=93  Identities=8%  Similarity=0.070  Sum_probs=63.6

Q ss_pred             CCeEEEEEcc---cccceehhc--C-----------CCCceEEEEEcCCCCEEEEecCC-CcEEEEeCcCCeeeEEee--
Q psy16373         63 DHTLKVYKLE---DQQLLFTLH--G-----------HCGPITTLFIDGVSMMSGSGSQD-GLLCVWDTVTGACMYSIQ--  123 (166)
Q Consensus        63 d~~v~v~~~~---~~~~~~~~~--~-----------~~~~v~~~~~~~~~~~~~~~~~d-~~v~~~d~~~~~~~~~~~--  123 (166)
                      +..|..+|+.   +++.+....  .           -......++..++|+..++++.. +.|...+.... .+..+.  
T Consensus        99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~  177 (334)
T 2p9w_A           99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWE  177 (334)
T ss_dssp             CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEEC
T ss_pred             CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeec
Confidence            6789999998   776653322  1           11247899999999999998888 88877776433 333221  


Q ss_pred             c----ccccEEEEEEcC--CeEEEeecCCcEEEEECCcc
Q psy16373        124 A----HDGCIHALTYSD--SYVISLGQDERLCVWDRFQG  156 (166)
Q Consensus       124 ~----~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~  156 (166)
                      .    .....+.|+++|  ..|++...++.|..+|+++.
T Consensus       178 ~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p  216 (334)
T 2p9w_A          178 SGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP  216 (334)
T ss_dssp             CCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred             CCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence            1    112356899997  36666656999999998743

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=92.33  E-value=1.7  Score=29.25  Aligned_cols=71  Identities=10%  Similarity=0.107  Sum_probs=39.4

Q ss_pred             ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-CeEEEeec--CC-cEEEEECCcccc
Q psy16373         86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-SYVISLGQ--DE-RLCVWDRFQGHL  158 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~~l~~~~~--d~-~i~~wd~~~~~~  158 (166)
                      ....++++++++.+++...++.|..+|.... ....+. .......+++.+ +.++.+..  ++ .|..+|..+++.
T Consensus        33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~  107 (306)
T 2p4o_A           33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV  107 (306)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred             CcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence            4567777777776666666777777776543 222222 233566777776 33444442  22 355566555543

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=92.27  E-value=2  Score=29.85  Aligned_cols=109  Identities=6%  Similarity=0.017  Sum_probs=69.0

Q ss_pred             CceEEEEec--CcEEEEEe-cCCeEEEEEccccccee-hhcC----C--CCceEEEEE---cCCCCEEEEec--------
Q psy16373         45 QPITVLECV--SNRVITGS-QDHTLKVYKLEDQQLLF-TLHG----H--CGPITTLFI---DGVSMMSGSGS--------  103 (166)
Q Consensus        45 ~~i~~~~~~--~~~l~~~~-~d~~v~v~~~~~~~~~~-~~~~----~--~~~v~~~~~---~~~~~~~~~~~--------  103 (166)
                      -.-.++.|+  ...++.++ ..++|..|+...+.... .+..    .  ...+..+.+   .|+++++++..        
T Consensus        13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~   92 (334)
T 2p9w_A           13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA   92 (334)
T ss_dssp             CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred             cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence            334577883  45555555 78999999997553222 2221    1  113578999   68877777543        


Q ss_pred             -----CCCcEEEEeCc---CCeeeEEee--ccc-----------ccEEEEEEcC--CeEEEeecC-CcEEEEEC
Q psy16373        104 -----QDGLLCVWDTV---TGACMYSIQ--AHD-----------GCIHALTYSD--SYVISLGQD-ERLCVWDR  153 (166)
Q Consensus       104 -----~d~~v~~~d~~---~~~~~~~~~--~~~-----------~~v~~i~~~~--~~l~~~~~d-~~i~~wd~  153 (166)
                           .+..+..+|+.   +++.+....  ...           .....++..+  +..++.+.. +.|...+.
T Consensus        93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p  166 (334)
T 2p9w_A           93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA  166 (334)
T ss_dssp             SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred             ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence                 25779999998   777665543  111           2477888887  466667666 66655554

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=92.24  E-value=3.4  Score=32.37  Aligned_cols=109  Identities=10%  Similarity=-0.069  Sum_probs=65.4

Q ss_pred             eEEEEe--cC-cEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCC-CcEEEEeCcCCeeeEE
Q psy16373         47 ITVLEC--VS-NRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQD-GLLCVWDTVTGACMYS  121 (166)
Q Consensus        47 i~~~~~--~~-~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d-~~v~~~d~~~~~~~~~  121 (166)
                      ...|++  .+ +++++-...+.|.+.++........+.........|+++|. +.++++-... +.|...++........
T Consensus       473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~l  552 (791)
T 3m0c_C          473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL  552 (791)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE
T ss_pred             cceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEE
Confidence            445555  34 55555566789999998754332222233445789999987 5555554333 6788888864433222


Q ss_pred             eecccccEEEEEEcC--CeEEEeec-CCcEEEEECCc
Q psy16373        122 IQAHDGCIHALTYSD--SYVISLGQ-DERLCVWDRFQ  155 (166)
Q Consensus       122 ~~~~~~~v~~i~~~~--~~l~~~~~-d~~i~~wd~~~  155 (166)
                      +...-.....|++++  +.|+.+.. .+.|...++..
T Consensus       553 v~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG  589 (791)
T 3m0c_C          553 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  589 (791)
T ss_dssp             ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             EeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence            332224567888885  56666643 46788888743

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=92.21  E-value=4.1  Score=33.37  Aligned_cols=108  Identities=15%  Similarity=0.120  Sum_probs=68.3

Q ss_pred             CceEEEEecCcEEEEEecCCeEEEEEcccccceeh-hcCCCCceEEEEEcCC------CCEEEEecC-CCcEEEEeCcCC
Q psy16373         45 QPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFT-LHGHCGPITTLFIDGV------SMMSGSGSQ-DGLLCVWDTVTG  116 (166)
Q Consensus        45 ~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~-~~~~~~~v~~~~~~~~------~~~~~~~~~-d~~v~~~d~~~~  116 (166)
                      ..|...+.++.+++.++ ++.+.++.+.+++.... -..-...|.|+++.|.      ..+++.|.. |++++++++.+.
T Consensus       514 ~~I~~As~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l  592 (1158)
T 3ei3_A          514 KNISVASCNSSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF  592 (1158)
T ss_dssp             CCCCEEEECSSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC
T ss_pred             CEEEEEEeCCCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC
Confidence            35766677566666664 67888888765432111 0123467999998763      468888886 999999999877


Q ss_pred             eeeEEeecc-cccEEEEE---EcC-CeEEEeecCCcEEEEEC
Q psy16373        117 ACMYSIQAH-DGCIHALT---YSD-SYVISLGQDERLCVWDR  153 (166)
Q Consensus       117 ~~~~~~~~~-~~~v~~i~---~~~-~~l~~~~~d~~i~~wd~  153 (166)
                      +.+....-. .....++.   +.. .++..+-.||.+.-+.+
T Consensus       593 ~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~  634 (1158)
T 3ei3_A          593 ELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGL  634 (1158)
T ss_dssp             CEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEE
T ss_pred             CeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEE
Confidence            665443211 12233333   323 47888888998755544

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=92.16  E-value=2.4  Score=30.42  Aligned_cols=107  Identities=6%  Similarity=-0.026  Sum_probs=61.1

Q ss_pred             EEEEec---CcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecC-CC----cEEEEeCcCCeee
Q psy16373         48 TVLECV---SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQ-DG----LLCVWDTVTGACM  119 (166)
Q Consensus        48 ~~~~~~---~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~----~v~~~d~~~~~~~  119 (166)
                      ..++++   +..|+.+...+.|+.+|+..++... +.........++++++++.+..+.. ++    .+...+. .+...
T Consensus       140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~  217 (430)
T 3tc9_A          140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFK  217 (430)
T ss_dssp             CEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSC
T ss_pred             CEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCcee
Confidence            456664   3556666655888889987654432 2224456789999999985544443 22    2333443 22211


Q ss_pred             --EEeecccccEEEEEEcC--CeEEEee-cCCcEEEEECCccc
Q psy16373        120 --YSIQAHDGCIHALTYSD--SYVISLG-QDERLCVWDRFQGH  157 (166)
Q Consensus       120 --~~~~~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~~~~  157 (166)
                        ..+.. ......++++|  ..|+.+. .++.|..++...+.
T Consensus       218 ~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~  259 (430)
T 3tc9_A          218 VITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE  259 (430)
T ss_dssp             SEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE
T ss_pred             eeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc
Confidence              22221 12345677777  3555544 56788888887554

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=91.81  E-value=3.2  Score=33.21  Aligned_cols=37  Identities=24%  Similarity=0.152  Sum_probs=31.8

Q ss_pred             ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe
Q psy16373         86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI  122 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~  122 (166)
                      .+.+++..++..++.+-+.|+++++|++.+++++.+.
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~  273 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI  273 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence            4677777888889999999999999999999887765

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=91.70  E-value=2.1  Score=28.93  Aligned_cols=105  Identities=9%  Similarity=0.046  Sum_probs=55.3

Q ss_pred             ecCcEEEEEec------CCeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCC-----CcEEEEeCcCCee
Q psy16373         52 CVSNRVITGSQ------DHTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQD-----GLLCVWDTVTGAC  118 (166)
Q Consensus        52 ~~~~~l~~~~~------d~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~~~  118 (166)
                      .++..++.|+.      ...+.+||..+.+-.  ..+...........+  ++..++.|+.+     ..+.+||+.+.+-
T Consensus       157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W  234 (318)
T 2woz_A          157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKW  234 (318)
T ss_dssp             ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred             ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeE
Confidence            36777777764      245889998876432  222211111222222  45666666543     2466888876532


Q ss_pred             --eEEeecccccEEEEEEcCCeEEEeecC--------------CcEEEEECCcccc
Q psy16373        119 --MYSIQAHDGCIHALTYSDSYVISLGQD--------------ERLCVWDRFQGHL  158 (166)
Q Consensus       119 --~~~~~~~~~~v~~i~~~~~~l~~~~~d--------------~~i~~wd~~~~~~  158 (166)
                        +..+.........+.+....++.|+.+              ..+.+||+.+.+-
T Consensus       235 ~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W  290 (318)
T 2woz_A          235 EVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW  290 (318)
T ss_dssp             EECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred             EECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence              222222222333344444566666543              4578889877554

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=91.60  E-value=4.4  Score=32.41  Aligned_cols=37  Identities=24%  Similarity=0.333  Sum_probs=30.0

Q ss_pred             cEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        128 CIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       128 ~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .+.+++..+  .++++.+.|+++|+|++.+++++.+..+
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL  275 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL  275 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence            345555555  4899999999999999999999887654

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=91.19  E-value=2.9  Score=29.59  Aligned_cols=111  Identities=13%  Similarity=0.033  Sum_probs=66.6

Q ss_pred             CCceEEEEe--cCcEEE-EEecCCeEEEEEccccc----ceehhcCCCCceEEEEEcC-CCCEEEEecCCCcEEEEeCcC
Q psy16373         44 HQPITVLEC--VSNRVI-TGSQDHTLKVYKLEDQQ----LLFTLHGHCGPITTLFIDG-VSMMSGSGSQDGLLCVWDTVT  115 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~-~~~~d~~v~v~~~~~~~----~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~  115 (166)
                      ...+..++|  .++.|+ +-...+.|..+++....    ....+.........+++.+ .++.+++-...+.|.+.++..
T Consensus       111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g  190 (400)
T 3p5b_L          111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG  190 (400)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred             cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence            445778888  344444 44456888888886521    2222222334578899987 466666767788999999875


Q ss_pred             CeeeEEeecccccEEEEEEcC--CeEEEeec--CCcEEEEECC
Q psy16373        116 GACMYSIQAHDGCIHALTYSD--SYVISLGQ--DERLCVWDRF  154 (166)
Q Consensus       116 ~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~--d~~i~~wd~~  154 (166)
                      ......+...-.....|+++|  +.|+....  .+.|...++.
T Consensus       191 ~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d  233 (400)
T 3p5b_L          191 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN  233 (400)
T ss_dssp             CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred             CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence            543333332234467888887  45555542  3667777764

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=90.93  E-value=2.4  Score=28.17  Aligned_cols=110  Identities=8%  Similarity=0.055  Sum_probs=69.3

Q ss_pred             cCCceEEEEe--cCcEEEEEecCCeEEEEEccc---ccceehh-------cCCCCceEEEEEcCC-CCEEEEecCCCcEE
Q psy16373         43 HHQPITVLEC--VSNRVITGSQDHTLKVYKLED---QQLLFTL-------HGHCGPITTLFIDGV-SMMSGSGSQDGLLC  109 (166)
Q Consensus        43 ~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~---~~~~~~~-------~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~  109 (166)
                      .......+++  .++.|+++.......+|.+..   ...+..+       ..+.....+++++|. +.+++....++.+.
T Consensus       119 ~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~  198 (255)
T 3qqz_A          119 TNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQ  198 (255)
T ss_dssp             CSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred             ccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEE
Confidence            3455789999  555777777665556666541   1111111       113345789999998 66777777888999


Q ss_pred             EEeCcCCeeeEEeeccc---------ccEEEEEEcC-CeEEEeecCCcEEEEEC
Q psy16373        110 VWDTVTGACMYSIQAHD---------GCIHALTYSD-SYVISLGQDERLCVWDR  153 (166)
Q Consensus       110 ~~d~~~~~~~~~~~~~~---------~~v~~i~~~~-~~l~~~~~d~~i~~wd~  153 (166)
                      .+|.. ++.+..+.-..         ..--.|+|.+ ..|+..++.+.++.+.-
T Consensus       199 ~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~~  251 (255)
T 3qqz_A          199 EVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTP  251 (255)
T ss_dssp             EECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEEC
T ss_pred             EEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEEe
Confidence            99965 55555543221         1446789988 46777788877776653

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=90.91  E-value=4.1  Score=30.83  Aligned_cols=65  Identities=11%  Similarity=0.055  Sum_probs=43.0

Q ss_pred             cCcEEEEEe-cCCeEEEEEccccccee--hhcCCCCceEEEEEcCCCCEEEEec-CC-----CcEEEEeCcCCee
Q psy16373         53 VSNRVITGS-QDHTLKVYKLEDQQLLF--TLHGHCGPITTLFIDGVSMMSGSGS-QD-----GLLCVWDTVTGAC  118 (166)
Q Consensus        53 ~~~~l~~~~-~d~~v~v~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~-~d-----~~v~~~d~~~~~~  118 (166)
                      ++..++.|+ .+..+.+||..+.+...  .+..... -.+.+..++++.++.|+ .+     ..+.+||..+.+.
T Consensus       253 ~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W  326 (656)
T 1k3i_A          253 NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW  326 (656)
T ss_dssp             TSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred             CCCEEEeCCCCCCceEEecCcCCceeECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence            788888887 45689999998764332  2221111 13455567888888888 34     4689999987653

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=90.68  E-value=2.8  Score=28.50  Aligned_cols=108  Identities=13%  Similarity=0.009  Sum_probs=64.1

Q ss_pred             eEEEEe--cC-cEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCC-CcEEEEeCcCCeeeEE
Q psy16373         47 ITVLEC--VS-NRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQD-GLLCVWDTVTGACMYS  121 (166)
Q Consensus        47 i~~~~~--~~-~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d-~~v~~~d~~~~~~~~~  121 (166)
                      ...+++  .+ ++.++-...+.|.+.+.........+.........++++|. +..+++.... +.|...++. +.....
T Consensus        79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~  157 (316)
T 1ijq_A           79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYS  157 (316)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEE
T ss_pred             cCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEE
Confidence            355665  34 44455556789999998744322222223346789999986 4444554333 678888875 333333


Q ss_pred             ee-cccccEEEEEEcC--CeEEEee-cCCcEEEEECCc
Q psy16373        122 IQ-AHDGCIHALTYSD--SYVISLG-QDERLCVWDRFQ  155 (166)
Q Consensus       122 ~~-~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~~  155 (166)
                      +. ..-...+.+++++  +.|+.+. ..+.|..+|...
T Consensus       158 ~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg  195 (316)
T 1ijq_A          158 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  195 (316)
T ss_dssp             EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             EEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence            32 2223567899986  4665555 456899998853

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=90.40  E-value=2.9  Score=28.15  Aligned_cols=110  Identities=8%  Similarity=0.012  Sum_probs=65.3

Q ss_pred             CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC--CcEEEEeCcCCeeeE
Q psy16373         45 QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD--GLLCVWDTVTGACMY  120 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d--~~v~~~d~~~~~~~~  120 (166)
                      .....+++  +++++++-..++.|..+|.... ....+. .......+++.++++.+++....  ..+..+|..+++...
T Consensus        32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~  109 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET  109 (306)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence            34667888  5665556557899999988753 222222 23468899999999877665432  246677777776432


Q ss_pred             Eeec-ccccEEEEEEcC-CeEEEee-cCCcEEEEECCcc
Q psy16373        121 SIQA-HDGCIHALTYSD-SYVISLG-QDERLCVWDRFQG  156 (166)
Q Consensus       121 ~~~~-~~~~v~~i~~~~-~~l~~~~-~d~~i~~wd~~~~  156 (166)
                      .... .......++..+ ..++.+. .++.|..+|..++
T Consensus       110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~  148 (306)
T 2p4o_A          110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP  148 (306)
T ss_dssp             EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred             EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence            2211 111223343333 4444444 4788888887643

>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A

Probab=90.31  E-value=1  Score=34.74  Aligned_cols=72  Identities=17%  Similarity=0.116  Sum_probs=44.9

Q ss_pred             EEEEecCCCceEEEeecccccceeeceee--------eeeeec-----cCCceEEEEecCcEEEEEecCCeEEEEEcccc
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCK--------VESTRA-----HHQPITVLECVSNRVITGSQDHTLKVYKLEDQ   74 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-----~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~   74 (166)
                      ..+++-.+||++++..... .+.......        ..-+.+     ....|.++.++..++++-+.|+++|+|+++++
T Consensus       173 ~liVsL~DGGLLrL~r~~~-~d~~~~~Fnd~s~l~SL~~lf~~~~~~~~~~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~  251 (729)
T 3f7f_A          173 FSVVFLEDGGLLGLKKVDG-VHYEPLLFNDNSYLKCLTRFFSRSSKSDYDSVISCKLFHERYLIVLTQNCHLKIWDLTSF  251 (729)
T ss_dssp             BEEEEETTSCEECCEESSS-SCEECCCCCCCGGGGGGSTTCCTTCSSCCCCEEEEEEETTTEEEEEETTCEEEEEETTTT
T ss_pred             eEEEEEcCCCEEEEEeccC-CCcceeeecCCchhhhhHHhhcCCCCCCcCceEEEeccCCcEEEEEEcCCeEEEEEcCCC
Confidence            3677778888887765432 111100000        000111     22346777778889999999999999999998


Q ss_pred             cceehh
Q psy16373         75 QLLFTL   80 (166)
Q Consensus        75 ~~~~~~   80 (166)
                      +++...
T Consensus       252 ~lv~t~  257 (729)
T 3f7f_A          252 TLIQDY  257 (729)
T ss_dssp             EEEEEE
T ss_pred             ceEEee
Confidence            866544

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=90.20  E-value=6.8  Score=32.16  Aligned_cols=109  Identities=11%  Similarity=0.105  Sum_probs=65.9

Q ss_pred             cCCceEEEEe-cCcEEEEEecCCeEEEEEccccccee-hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc--CCee
Q psy16373         43 HHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLF-TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV--TGAC  118 (166)
Q Consensus        43 ~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~--~~~~  118 (166)
                      ..+++++++- .| +|++| ....+++|++...+.+. ....+. .+..+.....+++++.|+.-..+.+...+  ..+ 
T Consensus       884 v~g~v~al~~~~g-~Lla~-ig~~l~vy~l~~~~~L~~~~~~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~-  959 (1158)
T 3ei3_A          884 VKGAVYSMVEFNG-KLLAS-INSTVRLYEWTTEKELRTECNHYN-NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGN-  959 (1158)
T ss_dssp             ESSCEEEEEEETT-EEEEE-ETTEEEEEEECTTSCEEEEEEECC-CSCEEEEEEETTEEEEEESSBCEEEEEEETTTTE-
T ss_pred             cCCcCEEEeeeCC-EEEEE-cCCEEEEEECCCCceEEEEeeccc-cEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCe-
Confidence            4678999998 66 44443 35799999998655433 111111 12222332346788888877777765433  332 


Q ss_pred             eEEee--cccccEEEEEEc-CCeEEEeecCCcEEEEECCc
Q psy16373        119 MYSIQ--AHDGCIHALTYS-DSYVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       119 ~~~~~--~~~~~v~~i~~~-~~~l~~~~~d~~i~~wd~~~  155 (166)
                      +..+.  .....++++.+- .+.++.+..++.|.+.....
T Consensus       960 L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~  999 (1158)
T 3ei3_A          960 FEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS  999 (1158)
T ss_dssp             EEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECT
T ss_pred             EEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCC
Confidence            22222  234567777774 47888899999988886543

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=89.72  E-value=4.3  Score=29.14  Aligned_cols=110  Identities=10%  Similarity=0.058  Sum_probs=61.7

Q ss_pred             eEEEEec----CcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC---Cc-EEEEeCcCCee
Q psy16373         47 ITVLECV----SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD---GL-LCVWDTVTGAC  118 (166)
Q Consensus        47 i~~~~~~----~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d---~~-v~~~d~~~~~~  118 (166)
                      ...++++    ...|+.+...+.|+.+|..+++.... .........++++++++++++....   .. +...+...+..
T Consensus       141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~  219 (433)
T 4hw6_A          141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT  219 (433)
T ss_dssp             CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred             CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence            4577774    25566665558899999877655433 2244568899999999866554322   12 33333222211


Q ss_pred             -eEEeecccccEEEEEEcC--CeEEEee-cCCcEEEEECCcccc
Q psy16373        119 -MYSIQAHDGCIHALTYSD--SYVISLG-QDERLCVWDRFQGHL  158 (166)
Q Consensus       119 -~~~~~~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~~~~~  158 (166)
                       ...+. .-.....+++++  ..|+.+. .++.|+.+|..++..
T Consensus       220 ~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~  262 (433)
T 4hw6_A          220 ERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL  262 (433)
T ss_dssp             CEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred             cccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence             01111 112234566776  3555444 466788888776654

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=88.93  E-value=1.8  Score=30.09  Aligned_cols=67  Identities=13%  Similarity=0.146  Sum_probs=45.7

Q ss_pred             CEEEEecCCCcEEEEeCcCCeeeEEeeccc-ccEEEEEEc----CCeEEEe--ecCCcEEEEECCcccceeeee
Q psy16373         97 MMSGSGSQDGLLCVWDTVTGACMYSIQAHD-GCIHALTYS----DSYVISL--GQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus        97 ~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~v~~i~~~----~~~l~~~--~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      ..++.++.||.+.-+|.++|+....+.... .++....-.    .+.++.+  ..||.|..++..+|.....+.
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~   84 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLS   84 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEE
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeec
Confidence            467788999999999999999999887541 232221111    1234433  579999999998886655443

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=88.52  E-value=3.5  Score=33.62  Aligned_cols=36  Identities=25%  Similarity=0.155  Sum_probs=29.3

Q ss_pred             eEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe
Q psy16373         87 ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI  122 (166)
Q Consensus        87 v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~  122 (166)
                      +.+++..++..++.+-+.|+++++|++.++.++.+.
T Consensus       240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~  275 (1139)
T 4fhn_B          240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI  275 (1139)
T ss_dssp             BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred             eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence            345556677788889999999999999999887764

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=88.40  E-value=4.3  Score=27.40  Aligned_cols=104  Identities=10%  Similarity=0.074  Sum_probs=54.4

Q ss_pred             ecCcEEEEEecC-------CeEEEEEccccccee--hhcCCCCceEEEEEcCCCCEEEEecC------CCcEEEEeCcCC
Q psy16373         52 CVSNRVITGSQD-------HTLKVYKLEDQQLLF--TLHGHCGPITTLFIDGVSMMSGSGSQ------DGLLCVWDTVTG  116 (166)
Q Consensus        52 ~~~~~l~~~~~d-------~~v~v~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~------d~~v~~~d~~~~  116 (166)
                      .++..++.|+.+       ..+.+||..+.+...  .+......-..+.  .++..++.|+.      -..+.+||+.+.
T Consensus       108 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~  185 (318)
T 2woz_A          108 VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKG  185 (318)
T ss_dssp             ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTT
T ss_pred             ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCC
Confidence            377777777754       357788887654322  2221111112222  34566666654      235889998876


Q ss_pred             eee--EEeecccccEEEEEEcCCeEEEeecC-----CcEEEEECCccc
Q psy16373        117 ACM--YSIQAHDGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGH  157 (166)
Q Consensus       117 ~~~--~~~~~~~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~  157 (166)
                      +-.  ..+.........+.+....++.|+.+     ..+.+||+.+.+
T Consensus       186 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~  233 (318)
T 2woz_A          186 DWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK  233 (318)
T ss_dssp             EEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred             EEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence            432  22222222233344444555666543     356788887654

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=88.14  E-value=2.7  Score=34.28  Aligned_cols=28  Identities=29%  Similarity=0.343  Sum_probs=25.4

Q ss_pred             CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373        137 SYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       137 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .++++.+.|+++|+|++.+++++.+..+
T Consensus       250 ~~lftL~~D~~LRiWsl~t~~~v~t~DL  277 (1139)
T 4fhn_B          250 NVLVMLSLDYKLKVLDLSTNQCVETIEL  277 (1139)
T ss_dssp             TEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred             cEEEEEeCCCEEEEEECCCCCeEEeech
Confidence            5899999999999999999999988764

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=88.13  E-value=4.7  Score=27.54  Aligned_cols=104  Identities=8%  Similarity=0.092  Sum_probs=58.3

Q ss_pred             CceEEEEe-cCcEEEEEecCCeEE-EEEc-ccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeC--cCCeee
Q psy16373         45 QPITVLEC-VSNRVITGSQDHTLK-VYKL-EDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT--VTGACM  119 (166)
Q Consensus        45 ~~i~~~~~-~~~~l~~~~~d~~v~-v~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~--~~~~~~  119 (166)
                      ..+..+.+ .+..++.++.++.+. -.|- ++.+.+.  ......+..+.+.+++..++.+...+..+-.|-  .+.+.+
T Consensus       122 ~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~--~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~  199 (327)
T 2xbg_A          122 GSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALV--QEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH  199 (327)
T ss_dssp             SCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEE--CSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE
T ss_pred             CCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEee--cCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC
Confidence            34666776 444444445556442 2221 1112221  234456889999998888877655444444552  344444


Q ss_pred             EEeecccccEEEEEEcC-CeEEEeecCCcEEEEE
Q psy16373        120 YSIQAHDGCIHALTYSD-SYVISLGQDERLCVWD  152 (166)
Q Consensus       120 ~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd  152 (166)
                      .  ......+..+.+.+ +.++.++.++.++..+
T Consensus       200 ~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~  231 (327)
T 2xbg_A          200 N--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSD  231 (327)
T ss_dssp             E--CCSSSCEEEEEECTTSCEEEEETTTEEEEEE
T ss_pred             C--CCCCCccceeEECCCCCEEEEeCCceEEEec
Confidence            2  22345678888876 4666667777776663

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=88.01  E-value=5.5  Score=28.19  Aligned_cols=110  Identities=11%  Similarity=-0.074  Sum_probs=66.1

Q ss_pred             ceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecC-CCcEEEEeCcCCeeeE
Q psy16373         46 PITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQ-DGLLCVWDTVTGACMY  120 (166)
Q Consensus        46 ~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~-d~~v~~~d~~~~~~~~  120 (166)
                      ....+++   .+++.++-...+.|.+.++........+.........++++|. +.++.+-.. .+.|...++.......
T Consensus       160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~  239 (400)
T 3p5b_L          160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS  239 (400)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE
T ss_pred             CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE
Confidence            4556666   3445555556788988888754333333333445789999986 445554422 4688888876433222


Q ss_pred             EeecccccEEEEEEcC--CeEEEee-cCCcEEEEECCc
Q psy16373        121 SIQAHDGCIHALTYSD--SYVISLG-QDERLCVWDRFQ  155 (166)
Q Consensus       121 ~~~~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~~  155 (166)
                      .....-...+.|++++  +.|+.+. ..+.|..+|+..
T Consensus       240 ~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG  277 (400)
T 3p5b_L          240 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  277 (400)
T ss_dssp             EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             EEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence            2222224567889986  4666664 456788888753

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=87.44  E-value=6.3  Score=28.27  Aligned_cols=69  Identities=9%  Similarity=0.065  Sum_probs=45.5

Q ss_pred             ceEEEEEcC-CCCEEEEecCCCcEEEEeCcCCeeeEEe-ecc-cccEEEEEEcC--CeEEEee-cCCcEEEEECC
Q psy16373         86 PITTLFIDG-VSMMSGSGSQDGLLCVWDTVTGACMYSI-QAH-DGCIHALTYSD--SYVISLG-QDERLCVWDRF  154 (166)
Q Consensus        86 ~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~~~~~~~-~~~-~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~  154 (166)
                      ....++++| ++..+++-..++.|+.+|..++.....+ ... ...-..++|+|  +.|+.+. ..+.|..++..
T Consensus       229 ~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d  303 (433)
T 4hw6_A          229 GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN  303 (433)
T ss_dssp             SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred             CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence            346788899 6777777777889999998877652222 211 12234699998  3455554 46788887754

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=87.31  E-value=7  Score=28.62  Aligned_cols=121  Identities=10%  Similarity=0.134  Sum_probs=78.0

Q ss_pred             eeeeccCCceEEEEecC-----cEEEEEecC---CeEEEEEcccc---ccee-----h-h---cCCCCceEEEEEcCCCC
Q psy16373         38 ESTRAHHQPITVLECVS-----NRVITGSQD---HTLKVYKLEDQ---QLLF-----T-L---HGHCGPITTLFIDGVSM   97 (166)
Q Consensus        38 ~~~~~~~~~i~~~~~~~-----~~l~~~~~d---~~v~v~~~~~~---~~~~-----~-~---~~~~~~v~~~~~~~~~~   97 (166)
                      +.++||.+....+..++     ..++.+...   +.+++.++...   ....     . +   ..-.+...++.+++...
T Consensus       192 Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg  271 (494)
T 1bpo_A          192 QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD  271 (494)
T ss_dssp             EEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT
T ss_pred             chheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC
Confidence            44567766665555532     234444442   78999988542   1100     1 0   11234567888888877


Q ss_pred             EEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccc
Q psy16373         98 MSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus        98 ~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      .+..-+.-|.+.++|+.++.++..-+-...+|..-+.+.  .-++.....|.|.--.+.....
T Consensus       272 viyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i  334 (494)
T 1bpo_A          272 VVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI  334 (494)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred             EEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccc
Confidence            777788999999999999999987766666766555543  4667777777776665554443

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=87.18  E-value=9.3  Score=29.95  Aligned_cols=118  Identities=10%  Similarity=-0.004  Sum_probs=69.3

Q ss_pred             CceEEEEe--cCcEEEEEec--CCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeee
Q psy16373         45 QPITVLEC--VSNRVITGSQ--DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACM  119 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~~--d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~  119 (166)
                      .....|++  ....|+....  .+.|.+.++........+.........|++++. +.++++-.....|...++......
T Consensus       514 ~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~  593 (791)
T 3m0c_C          514 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK  593 (791)
T ss_dssp             CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred             CCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceE
Confidence            34567777  3345554442  367888887643332222223356789999976 445555556678999998644332


Q ss_pred             EEeecc--cccEEEEEEcCCeEEEee-cCCcEEEEECCcccceeee
Q psy16373        120 YSIQAH--DGCIHALTYSDSYVISLG-QDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       120 ~~~~~~--~~~v~~i~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~  162 (166)
                      ..+...  -....+|++..+.|+.+. ..+.|...|..+|+.+..+
T Consensus       594 ~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l  639 (791)
T 3m0c_C          594 TILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLL  639 (791)
T ss_dssp             EEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred             EEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence            222221  123346676666666555 4577888887777766555

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=87.04  E-value=5.4  Score=27.07  Aligned_cols=117  Identities=13%  Similarity=0.044  Sum_probs=68.9

Q ss_pred             CceEEEEe--cCcEEEEEec-C-CeEEEEEcccccceehh-cCCCCceEEEEEcCCC-CEEEEecCCCcEEEEeCcCCee
Q psy16373         45 QPITVLEC--VSNRVITGSQ-D-HTLKVYKLEDQQLLFTL-HGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGAC  118 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~~-d-~~v~v~~~~~~~~~~~~-~~~~~~v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~  118 (166)
                      .....+++  .+..|+.+.. . +.|...+.... ....+ ...-.....+++++++ ..+++-...+.|..+|+.... 
T Consensus       120 ~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-  197 (316)
T 1ijq_A          120 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-  197 (316)
T ss_dssp             CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-
T ss_pred             CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-
Confidence            34567777  3455554443 2 67888877532 22222 1223457899999874 455555667799999986432 


Q ss_pred             eEEe-ec--ccccEEEEEEcCCeEEEee-cCCcEEEEECCcccceeeee
Q psy16373        119 MYSI-QA--HDGCIHALTYSDSYVISLG-QDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       119 ~~~~-~~--~~~~v~~i~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~  163 (166)
                      ...+ ..  .-.....+++..+.++.+. ..+.|..+|..+++.+..+.
T Consensus       198 ~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~  246 (316)
T 1ijq_A          198 RKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA  246 (316)
T ss_dssp             CEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred             eEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence            2222 21  1223456676666555544 56789999987887666553

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=86.83  E-value=5.8  Score=27.20  Aligned_cols=58  Identities=9%  Similarity=-0.063  Sum_probs=31.8

Q ss_pred             cEEEEeCcCC--eeeEEeecccccEEEEEEcCCeEEEeecCC------cEEEEECCcccceeeeee
Q psy16373        107 LLCVWDTVTG--ACMYSIQAHDGCIHALTYSDSYVISLGQDE------RLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       107 ~v~~~d~~~~--~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~------~i~~wd~~~~~~~~~~~~  164 (166)
                      .+.+||+.+.  ..+..+........++.+....++.|+.++      .+.++++++++.+...+.
T Consensus       286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~  351 (357)
T 2uvk_A          286 STDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLE  351 (357)
T ss_dssp             CCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred             eEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence            4678888754  344444333333344555556777777542      466668888887765544

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=85.75  E-value=6.6  Score=26.82  Aligned_cols=107  Identities=10%  Similarity=-0.037  Sum_probs=63.1

Q ss_pred             eEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEec-CCCcEEEEeCcCCeeeEE
Q psy16373         47 ITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGS-QDGLLCVWDTVTGACMYS  121 (166)
Q Consensus        47 i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~-~d~~v~~~d~~~~~~~~~  121 (166)
                      ...+++   .+++.++-...+.|.+++.........+.........++++|. +.++.+-. ..+.|...++.... ...
T Consensus        81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~  159 (318)
T 3sov_A           81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFI  159 (318)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEE
T ss_pred             ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEE
Confidence            344555   3445555556788999998754322222233455789999986 44455442 35788888875332 222


Q ss_pred             e-ecccccEEEEEEcC--CeEEEee-cCCcEEEEECC
Q psy16373        122 I-QAHDGCIHALTYSD--SYVISLG-QDERLCVWDRF  154 (166)
Q Consensus       122 ~-~~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~  154 (166)
                      + ...-...+.+++++  +.|+.+. ..+.|..+|+.
T Consensus       160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d  196 (318)
T 3sov_A          160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD  196 (318)
T ss_dssp             EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence            2 22223457899986  4565554 45778888875

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=84.72  E-value=7  Score=26.27  Aligned_cols=103  Identities=12%  Similarity=0.074  Sum_probs=53.8

Q ss_pred             cCcEEEEEec-----------CCeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCC--------CcEEEE
Q psy16373         53 VSNRVITGSQ-----------DHTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQD--------GLLCVW  111 (166)
Q Consensus        53 ~~~~l~~~~~-----------d~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d--------~~v~~~  111 (166)
                      ++..++.|+.           ...+..||..+.+..  ..+......-....+  ++..++.|+.+        ..+.++
T Consensus        45 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~  122 (315)
T 4asc_A           45 ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCY  122 (315)
T ss_dssp             TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEE
T ss_pred             CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEE
Confidence            7777777773           122778888775432  122111111122222  45666666632        358889


Q ss_pred             eCcCCee--eEEeecccccEEEEEEcCCeEEEeec-C-----CcEEEEECCccc
Q psy16373        112 DTVTGAC--MYSIQAHDGCIHALTYSDSYVISLGQ-D-----ERLCVWDRFQGH  157 (166)
Q Consensus       112 d~~~~~~--~~~~~~~~~~v~~i~~~~~~l~~~~~-d-----~~i~~wd~~~~~  157 (166)
                      |+.+.+-  +..+.........+......++.|+. +     ..+.+||+.+.+
T Consensus       123 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~  176 (315)
T 4asc_A          123 DRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFE  176 (315)
T ss_dssp             ETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred             CCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence            9876642  22222222233334444455666665 2     468888887654

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=83.09  E-value=5.6  Score=30.06  Aligned_cols=69  Identities=4%  Similarity=-0.148  Sum_probs=46.5

Q ss_pred             eEEEEEcCCCCEEEEec-CCCcEEEEeCcCC------ee-------eEEeecccccEEEEEEcC-CeEEEee-cCCcEEE
Q psy16373         87 ITTLFIDGVSMMSGSGS-QDGLLCVWDTVTG------AC-------MYSIQAHDGCIHALTYSD-SYVISLG-QDERLCV  150 (166)
Q Consensus        87 v~~~~~~~~~~~~~~~~-~d~~v~~~d~~~~------~~-------~~~~~~~~~~v~~i~~~~-~~l~~~~-~d~~i~~  150 (166)
                      ...+.++|+|.+++.++ .+.++.++|++.-      +.       ..... -.-.....+|++ ...+|.- .|..|..
T Consensus       325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvk  403 (638)
T 3sbq_A          325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVK  403 (638)
T ss_dssp             CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred             CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEE
Confidence            46788999998877654 5779999998732      11       11222 123456788987 4555554 6999999


Q ss_pred             EECCcc
Q psy16373        151 WDRFQG  156 (166)
Q Consensus       151 wd~~~~  156 (166)
                      |++...
T Consensus       404 Wni~~a  409 (638)
T 3sbq_A          404 WNMEEA  409 (638)
T ss_dssp             EEHHHH
T ss_pred             EeccHH
Confidence            999764

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=82.84  E-value=14  Score=28.38  Aligned_cols=110  Identities=16%  Similarity=0.144  Sum_probs=63.0

Q ss_pred             CceEEEEe-cCcEEEEEecCCeEEEEEccccccee-hhcC----CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee
Q psy16373         45 QPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLF-TLHG----HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC  118 (166)
Q Consensus        45 ~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~-~~~~----~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~  118 (166)
                      ..|.++.. ....|..|..+ .+..++..+++... ....    ....|.++...+++..+..|+. +-+..+|..+++.
T Consensus       146 ~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~  223 (758)
T 3ott_A          146 NTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQI  223 (758)
T ss_dssp             SCEEEEEECTTCCEEEEETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEE
T ss_pred             CeEEEEEEcCCCCEEEEeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeE
Confidence            35777777 34555556654 57778876654321 1111    1234888888776654334443 3577888776643


Q ss_pred             eEEeecccccEEEEEEcC-CeEEEeecCCcEEEEECCccc
Q psy16373        119 MYSIQAHDGCIHALTYSD-SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       119 ~~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      ..........|.++...+ +.|..|+. +-+.+++..+++
T Consensus       224 ~~~~~l~~~~i~~i~~d~~g~lWigT~-~Gl~~~~~~~~~  262 (758)
T 3ott_A          224 KQTEAFHNNSIKSLALDGNGDLLAGTD-NGLYVYHNDTTP  262 (758)
T ss_dssp             EEEEEEEEEEEEEEEECTTCCEEEEET-TEEEEECCTTSC
T ss_pred             EeccCCCCCeEEEEEEcCCCCEEEEeC-CceeEEecCCCc
Confidence            221111234577777765 57777774 457888876543

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=81.87  E-value=2.3  Score=27.90  Aligned_cols=64  Identities=11%  Similarity=0.107  Sum_probs=40.2

Q ss_pred             ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeeccccc--------EEEEEEcCC-eEEEeecCCcEEEEEC
Q psy16373         86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGC--------IHALTYSDS-YVISLGQDERLCVWDR  153 (166)
Q Consensus        86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~--------v~~i~~~~~-~l~~~~~d~~i~~wd~  153 (166)
                      .+..++|+|++.+.+.  .+|.+.-.+..+... ..+.+....        -.++.|+++ .|+.+ .|+.|+-++.
T Consensus        42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~-~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~p  114 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDN-DNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASP  114 (236)
T ss_dssp             TCSEEEECTTSCEEEE--ETTEEEEESCCCSTT-CCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESC
T ss_pred             cceeEEECCCccEEEE--eCCeEEEECCCCCCc-ccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCC
Confidence            5679999999998877  677777666544211 111111112        257888884 55555 6798887775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	166
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	4e-15
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	7e-10
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	3e-06
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-05
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	9e-05
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-10
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	5e-08
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	6e-08
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-04
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	0.002
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	5e-10
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	4e-05
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	1e-04
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	0.003
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-09
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-06
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	6e-09
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	9e-08
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	1e-06
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	6e-06
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-05
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	5e-04
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	0.003
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	3e-07
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	4e-07
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	5e-06
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	1e-05
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	0.002
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-05
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	5e-05
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	3e-05
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	3e-04
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	4e-05
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	4e-04
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	4e-05
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	5e-05
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	8e-05
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	2e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	7e-04
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	9e-05
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	9e-04
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	4e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	7e-04
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.002

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.0 bits (167), Expect = 4e-15
 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 2/112 (1%)

Query: 43  HHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSG 102
                         +++GS+D T+K++ +     L TL GH   +  +          S 
Sbjct: 206 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSC 265

Query: 103 SQDGLLCVWDTVTGACMYSIQAHDGCIHALTYS--DSYVISLGQDERLCVWD 152
           + D  L VWD     CM ++ AH+  + +L +     YV++   D+ + VW+
Sbjct: 266 ADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.0 bits (128), Expect = 7e-10
 Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 22/164 (13%)

Query: 22  KKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLH 81
           K +++ E  T  C K  +       +         + + S D T++V+ +  ++    L 
Sbjct: 123 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 182

Query: 82  GHCGPITTLFIDGVSMMSG--------------------SGSQDGLLCVWDTVTGACMYS 121
            H   +  +     S  S                     SGS+D  + +WD  TG C+ +
Sbjct: 183 EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 242

Query: 122 IQAHDGCIHALTYS--DSYVISLGQDERLCVWDRFQGHLLSTIQ 163
           +  HD  +  + +     +++S   D+ L VWD      + T+ 
Sbjct: 243 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 286

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.6 bits (101), Expect = 3e-06
 Identities = 17/94 (18%), Positives = 34/94 (36%)

Query: 73  DQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHAL 132
                + L GH  P+T +    V  +  S S+D  + VWD  TG    +++ H   +  +
Sbjct: 6   RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDI 65

Query: 133 TYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQG 166
           ++  S  +       + +             + G
Sbjct: 66  SFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG 99

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.0 bits (97), Expect = 1e-05
 Identities = 28/127 (22%), Positives = 59/127 (46%), Gaps = 4/127 (3%)

Query: 41  RAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMM 98
             H  P+T +    V + +++ S+D T+KV+  E      TL GH   +  +  D    +
Sbjct: 14  SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 73

Query: 99  SGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYS--DSYVISLGQDERLCVWDRFQG 156
             S S D  + +WD     C+ ++  HD  + +++      +++S  +D+ + +W+   G
Sbjct: 74  LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG 133

Query: 157 HLLSTIQ 163
           + + T  
Sbjct: 134 YCVKTFT 140

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.3 bits (90), Expect = 9e-05
 Identities = 22/132 (16%), Positives = 53/132 (40%), Gaps = 22/132 (16%)

Query: 54  SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT 113
            + +++ S+D T+K+++++    + T  GH   +  +  +    +  S S D  + VW  
Sbjct: 113 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 172

Query: 114 VTGACMYSIQAHDGCIHALTY----------------------SDSYVISLGQDERLCVW 151
            T  C   ++ H   +  +++                         +++S  +D+ + +W
Sbjct: 173 ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 232

Query: 152 DRFQGHLLSTIQ 163
           D   G  L T+ 
Sbjct: 233 DVSTGMCLMTLV 244

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 56.7 bits (135), Expect = 1e-10
 Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 6/122 (4%)

Query: 37  VESTRAHHQPITVLECV--SNRVITGSQDHTLKV--YKLEDQQLLFTLHGHCGPITTLFI 92
            ++   H   I  +      N   TGS D T ++   + + + + ++       IT++  
Sbjct: 219 RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF 278

Query: 93  DGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCV 150
                +  +G  D    VWD +       +  HD  +  L  +D    V +   D  L +
Sbjct: 279 SKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338

Query: 151 WD 152
           W+
Sbjct: 339 WN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.0 bits (115), Expect = 5e-08
 Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 2/93 (2%)

Query: 22  KKMQVEEEMTLTCCKVESTRAHHQPITVLECVSN--RVITGSQDHTLKVYKLEDQQLLFT 79
              ++ +          S       IT +    +   ++ G  D    V+          
Sbjct: 248 ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGV 307

Query: 80  LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWD 112
           L GH   ++ L +    M   +GS D  L +W+
Sbjct: 308 LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 48.6 bits (114), Expect = 6e-08
 Identities = 19/116 (16%), Positives = 41/116 (35%), Gaps = 4/116 (3%)

Query: 52  CVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFI--DGVSMMSGSGSQDGLLC 109
             +   ++G+ D + K++ + +     T  GH   I  +    +G +  +GS      L 
Sbjct: 194 PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLF 253

Query: 110 VWDTVTGACMYSIQAHDGCIHALTYS--DSYVISLGQDERLCVWDRFQGHLLSTIQ 163
                     YS       I ++++S     +++   D    VWD  +      + 
Sbjct: 254 DLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA 309

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.8 bits (86), Expect = 3e-04
 Identities = 25/139 (17%), Positives = 49/139 (35%), Gaps = 2/139 (1%)

Query: 21  FKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTL 80
                ++          E                N+++T S D T  ++ +E  Q   T 
Sbjct: 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF 180

Query: 81  HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYS--DSY 138
            GH G + +L +   + +  SG+ D    +WD   G C  +   H+  I+A+ +    + 
Sbjct: 181 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 240

Query: 139 VISLGQDERLCVWDRFQGH 157
             +   D    ++D     
Sbjct: 241 FATGSDDATCRLFDLRADQ 259

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 35.1 bits (79), Expect = 0.002
 Identities = 18/64 (28%), Positives = 28/64 (43%)

Query: 75  QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTY 134
           +   TL GH   I  +     S +  S SQDG L +WD+ T   +++I      +    Y
Sbjct: 46  RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105

Query: 135 SDSY 138
           + S 
Sbjct: 106 APSG 109

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (129), Expect = 5e-10
 Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 11/129 (8%)

Query: 33  TCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFI 92
           TC  V +   H + I  L+     V++GS D+T++++ +E    L  L GH   +  +  
Sbjct: 167 TCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 226

Query: 93  DGVSMMSGSGSQDGLLCVWDTVTGA---------CMYSIQAHDGCIHALTYSDSYVISLG 143
           D   ++SG+   DG + VWD V            C+ ++  H G +  L + +  ++S  
Sbjct: 227 DNKRIVSGAY--DGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSS 284

Query: 144 QDERLCVWD 152
            D+ + +WD
Sbjct: 285 HDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (92), Expect = 4e-05
 Identities = 24/117 (20%), Positives = 55/117 (47%), Gaps = 2/117 (1%)

Query: 36  KVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV 95
           ++       + +  L+    ++++G +D+T+K++     +    L GH G +  L  D  
Sbjct: 7   RIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER 66

Query: 96  SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWD 152
            +++GS        VWD  TG  + ++  H   +  L +++  +++  +D  + VWD
Sbjct: 67  VIITGSSDSTV--RVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 121

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (88), Expect = 1e-04
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 2/83 (2%)

Query: 75  QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTY 134
           Q +         +  L  D   ++SG   +D  + +WD  T  C   +  H G +  L Y
Sbjct: 6   QRIHCRSETSKGVYCLQYDDQKIVSGL--RDNTIKIWDKNTLECKRILTGHTGSVLCLQY 63

Query: 135 SDSYVISLGQDERLCVWDRFQGH 157
            +  +I+   D  + VWD   G 
Sbjct: 64  DERVIITGSSDSTVRVWDVNTGE 86

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (77), Expect = 0.003
 Identities = 19/67 (28%), Positives = 29/67 (43%)

Query: 97  MMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQG 156
               S S D  + VW+T T   + ++  H   I  L Y D  V+S   D  + +WD   G
Sbjct: 149 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG 208

Query: 157 HLLSTIQ 163
             L  ++
Sbjct: 209 ACLRVLE 215

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.0 bits (128), Expect = 1e-09
 Identities = 22/166 (13%), Positives = 55/166 (33%), Gaps = 22/166 (13%)

Query: 9   HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSN--RVITGSQDHTL 66
           ++  GS    +     +    +     + ES   H   +  +    +   V++GS D ++
Sbjct: 219 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV 278

Query: 67  KVYKLEDQQLLFTLHGHC------------GPITTLFIDGVSMMSGSGSQDGLLCVWDTV 114
           K++ L++                         + ++          SGS+D  +  WD  
Sbjct: 279 KLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKK 338

Query: 115 TGACMYSIQAHDGCIHALTYSDS--------YVISLGQDERLCVWD 152
           +G  +  +Q H   + ++  ++            +   D +  +W 
Sbjct: 339 SGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.6 bits (101), Expect = 3e-06
 Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 21/151 (13%)

Query: 34  CCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLH-------GHCGP 86
           C    S       + V       +  GS D  ++V+  E   L+  L        GH   
Sbjct: 197 CSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS 256

Query: 87  ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIH--------------AL 132
           + ++          SGS D  + +W+          +  +                  A 
Sbjct: 257 VYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT 316

Query: 133 TYSDSYVISLGQDERLCVWDRFQGHLLSTIQ 163
           T +D Y++S  +D  +  WD+  G+ L  +Q
Sbjct: 317 TQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ 347

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (121), Expect = 6e-09
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 2/115 (1%)

Query: 43  HHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSG 102
           H   +  ++    RV++G+ D  +KV+  E +  L TL GH   + +L  DG+ ++SGS 
Sbjct: 136 HVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGS- 194

Query: 103 SQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGH 157
             D  + VWD  TG C++++  H      +   D+ ++S   D  + +WD   G 
Sbjct: 195 -LDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ 248

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (113), Expect = 9e-08
 Identities = 29/133 (21%), Positives = 63/133 (47%), Gaps = 5/133 (3%)

Query: 34  CCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFID 93
              + + + H   +  L+     V++GS D +++V+ +E    + TL GH    + + + 
Sbjct: 167 ETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK 226

Query: 94  GVSMMSGSGSQDGLLCVWDTVTGACMYSIQ---AHDGCIHALTYSDSYVISLGQDERLCV 150
              ++SG+   D  + +WD  TG C+ ++Q    H   +  L ++ ++VI+   D  + +
Sbjct: 227 DNILVSGNA--DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 284

Query: 151 WDRFQGHLLSTIQ 163
           WD   G  +  + 
Sbjct: 285 WDLKTGEFIRNLV 297

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (104), Expect = 1e-06
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 70  KLEDQQLLFTLHGHCGPITTLF-IDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGC 128
           +  + +    L GH   + T     G  ++  SGS D  L VW  VTG C+ ++  H G 
Sbjct: 2   RRGELKSPKVLKGHDDHVITCLQFCGNRIV--SGSDDNTLKVWSAVTGKCLRTLVGHTGG 59

Query: 129 IHALTYSDSYVISLGQDERLCVWDRFQGH 157
           + +    D+ +IS   D  L VW+   G 
Sbjct: 60  VWSSQMRDNIIISGSTDRTLKVWNAETGE 88

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (99), Expect = 6e-06
 Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 3/118 (2%)

Query: 41  RAHHQPI-TVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMS 99
           + H   + T L+   NR+++GS D+TLKV+     + L TL GH G + +  +    ++S
Sbjct: 13  KGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIIS 72

Query: 100 GSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGH 157
           GS  +   +   +T    C++++  H   +  +   +  V+S  +D  L VWD   G 
Sbjct: 73  GSTDRTLKVWNAETGE--CIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQ 128

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (93), Expect = 3e-05
 Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 12/131 (9%)

Query: 34  CCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPI-TTLFI 92
              + +   H    + +E   N +++G+ D T+K++ ++  Q L TL G          +
Sbjct: 207 GNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 266

Query: 93  DGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA-----HDGCIHALTYS-DSYVISLG--- 143
                   + S DG + +WD  TG  + ++         G +  +  S    V ++G   
Sbjct: 267 QFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 326

Query: 144 --QDERLCVWD 152
             ++ +L V D
Sbjct: 327 GTEETKLLVLD 337

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (84), Expect = 5e-04
 Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 2/130 (1%)

Query: 34  CCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFID 93
              + +   H   +  +     RV++GS+D TL+V+ +E  Q L  L GH   +    + 
Sbjct: 87  GECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQ 144

Query: 94  GVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDR 153
                  SG+ D ++ VWD  T  C++++Q H   +++L +   +V+S   D  + VWD 
Sbjct: 145 YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDV 204

Query: 154 FQGHLLSTIQ 163
             G+ + T+ 
Sbjct: 205 ETGNCIHTLT 214

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (78), Expect = 0.003
 Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 1/54 (1%)

Query: 111 WDTVTGACMYSIQAHDGCI-HALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQ 163
           W          ++ HD  +   L +  + ++S   D  L VW    G  L T+ 
Sbjct: 1   WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV 54

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 46.7 bits (109), Expect = 3e-07
 Identities = 19/140 (13%), Positives = 44/140 (31%), Gaps = 4/140 (2%)

Query: 2   NKSVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVS---NRVI 58
              +H+I L +G A  L   + +   E             A+H+ +  +  +    +   
Sbjct: 215 TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWR 274

Query: 59  TGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFI-DGVSMMSGSGSQDGLLCVWDTVTGA 117
             +    + V   +  + L          +     D   ++    + D  L + D  +G 
Sbjct: 275 HKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 334

Query: 118 CMYSIQAHDGCIHALTYSDS 137
            + S+         +T +D 
Sbjct: 335 ELRSVNQLGHGPQVITTADM 354

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.0 bits (107), Expect = 4e-07
 Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 3/119 (2%)

Query: 47  ITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTL-FIDGVSMMSGSGSQD 105
           IT L+   N VITG+ D  ++VY   +++ L  L GH G +  L +  G  ++SGS  + 
Sbjct: 16  ITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRT 75

Query: 106 GLLCVWDT--VTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTI 162
             +        T                   +  Y+++  +D  L VW   +   +   
Sbjct: 76  VRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDH 134

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.0 bits (99), Expect = 5e-06
 Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 3/81 (3%)

Query: 78  FTLHGHCGPITT-LFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD 136
            TL GH   + T L  +   ++  +G+ D ++ V+D++    +  +  HDG + AL Y+ 
Sbjct: 6   TTLRGHMTSVITCLQFEDNYVI--TGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH 63

Query: 137 SYVISLGQDERLCVWDRFQGH 157
             ++  G  +R       +  
Sbjct: 64  GGILVSGSTDRTVRVWDIKKG 84

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.1 bits (97), Expect = 1e-05
 Identities = 13/119 (10%), Positives = 30/119 (25%), Gaps = 13/119 (10%)

Query: 37  VESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTL------HGHCGPITTL 90
             + +AH   I  +   ++  ++ S D  LKV+  +                H   +  +
Sbjct: 7   ANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHV 66

Query: 91  FIDGVSMMSG-------SGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISL 142
            +               + S  G L  +          +      +           +L
Sbjct: 67  DVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWAL 125

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.6 bits (80), Expect = 0.002
 Identities = 12/64 (18%), Positives = 18/64 (28%)

Query: 72  EDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHA 131
              Q       H   + +L  +       S   DG L  WD  T   + ++  H   I  
Sbjct: 277 HSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEI 336

Query: 132 LTYS 135
               
Sbjct: 337 EEDI 340

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (95), Expect = 2e-05
 Identities = 8/61 (13%), Positives = 21/61 (34%), Gaps = 1/61 (1%)

Query: 54  SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT 113
               ++  +D+ L  ++      +F        + +  I        +GS D    V++ 
Sbjct: 277 GKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335

Query: 114 V 114
           +
Sbjct: 336 I 336

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (92), Expect = 5e-05
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 3/54 (5%)

Query: 101 SGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYS--DSYVISLGQDERLCVWD 152
           S  +D LL  W T  GA ++        + +   S  D Y+++   D++  V++
Sbjct: 282 STGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYE 334

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.0 bits (94), Expect = 3e-05
 Identities = 10/78 (12%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 55  NRVITGSQDHTLKVYKLEDQQ--LLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWD 112
            ++     +H + +Y+    +   +  L  H G +T +     S    +   D    VW 
Sbjct: 20  TQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 79

Query: 113 TVTGACMYSIQAHDGCIH 130
                   ++        
Sbjct: 80  LKGRTWKPTLVILRINRA 97

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.9 bits (86), Expect = 3e-04
 Identities = 6/61 (9%), Positives = 24/61 (39%), Gaps = 4/61 (6%)

Query: 101 SGSQDGLLCVWDTVTG--ACMYSIQAHDGCIHALTYS--DSYVISLGQDERLCVWDRFQG 156
               +  + +++        ++ ++ H+G +  + ++   + +++ G D    VW     
Sbjct: 24  ICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR 83

Query: 157 H 157
            
Sbjct: 84  T 84

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.3 bits (92), Expect = 4e-05
 Identities = 12/82 (14%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 34  CCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFID 93
             + +          +    S +  T   D T++V+ +   + +         +    + 
Sbjct: 243 YIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVG 302

Query: 94  GVSMMSG---SGSQDGLLCVWD 112
            V+  +G   S S DG L  ++
Sbjct: 303 VVATGNGRIISLSLDGTLNFYE 324

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.6 bits (85), Expect = 4e-04
 Identities = 11/57 (19%), Positives = 19/57 (33%), Gaps = 5/57 (8%)

Query: 101 SGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYS-----DSYVISLGQDERLCVWD 152
           +   D  + VWD  T  C+         +           +  +ISL  D  L  ++
Sbjct: 268 TVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 40.3 bits (93), Expect = 4e-05
 Identities = 14/124 (11%), Positives = 24/124 (19%), Gaps = 18/124 (14%)

Query: 61  SQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDG-----VSMMSG---SGSQDGLLCVWD 112
           +      V        L    G    +      G      S        G +   + V+D
Sbjct: 43  AGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFD 102

Query: 113 TVTGACMYSIQAHDGCI---------HALTYSDSYV-ISLGQDERLCVWDRFQGHLLSTI 162
            VT   +  I+  D                 S + +   L                    
Sbjct: 103 PVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLT 162

Query: 163 QLQG 166
           +   
Sbjct: 163 KSAS 166

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 40.1 bits (92), Expect = 5e-05
 Identities = 14/138 (10%), Positives = 32/138 (23%), Gaps = 9/138 (6%)

Query: 34  CCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLL---FTLHGHCGPITTL 90
                   +    I   +       T    +      L+  +     F            
Sbjct: 200 HQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLR 259

Query: 91  FIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYS--DSYVISLGQDERL 148
                + + G       L  +D      + +    D   + + +      +   G    L
Sbjct: 260 SPKDPNQIYGV---LNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDL 315

Query: 149 CVWDRFQGHLLSTIQLQG 166
            V++      +  I+L G
Sbjct: 316 AVFNPDTLEKVKNIKLPG 333

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.6 bits (90), Expect = 8e-05
 Identities = 11/74 (14%), Positives = 27/74 (36%), Gaps = 2/74 (2%)

Query: 81  HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT-GACMYSIQAHDGCIHALTYS-DSY 138
                       +    +  +GS D  + ++        + ++ AH   ++ L +   S 
Sbjct: 212 SWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST 271

Query: 139 VISLGQDERLCVWD 152
           ++S G D  +  W+
Sbjct: 272 LVSSGADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.0 bits (86), Expect = 2e-04
 Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 9/85 (10%)

Query: 73  DQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHAL 132
             ++L T+ GH   IT L ++ +     SGS DG +  W + +       Q H   I +L
Sbjct: 2   HDEVLKTISGHNKGITALTVNPLI----SGSYDGRIMEWSSSSMH-----QDHSNLIVSL 52

Query: 133 TYSDSYVISLGQDERLCVWDRFQGH 157
             S +   S    +     +    H
Sbjct: 53  DNSKAQEYSSISWDDTLKVNGITKH 77

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.5 bits (82), Expect = 7e-04
 Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 2/96 (2%)

Query: 20  DFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLED-QQLLF 78
             +          +     S +   +     E   + V TGS D  + +Y ++   +++ 
Sbjct: 193 SREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIK 252

Query: 79  TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV 114
            L+ H   +  L  +  S +  S   D  +  W+ V
Sbjct: 253 ALNAHKDGVNNLLWETPSTLV-SSGADACIKRWNVV 287

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 39.5 bits (90), Expect = 9e-05
 Identities = 7/55 (12%), Positives = 21/55 (38%), Gaps = 3/55 (5%)

Query: 101 SGSQDGLLCVWDTVTGACMYSIQAH---DGCIHALTYSDSYVISLGQDERLCVWD 152
           S S D  + +W+  T     +I      +     + ++   ++S+  +  +   +
Sbjct: 255 SASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 36.4 bits (82), Expect = 9e-04
 Identities = 10/60 (16%), Positives = 23/60 (38%), Gaps = 1/60 (1%)

Query: 54  SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG-PITTLFIDGVSMMSGSGSQDGLLCVWD 112
             ++ + S D T+K++ +   ++  T+          L I        S S +G +   +
Sbjct: 250 GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 37.3 bits (84), Expect = 4e-04
 Identities = 14/86 (16%), Positives = 23/86 (26%), Gaps = 1/86 (1%)

Query: 75  QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI-QAHDGCIHALT 133
            +    +GH   IT L          S   +G +  WD  TG         H   I  + 
Sbjct: 3   SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62

Query: 134 YSDSYVISLGQDERLCVWDRFQGHLL 159
            +    +     +         G  +
Sbjct: 63  TTSKGDLFTVSWDDHLKVVPAGGSGV 88

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.8 bits (83), Expect = 7e-04
 Identities = 11/97 (11%), Positives = 30/97 (30%), Gaps = 1/97 (1%)

Query: 59  TGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC 118
            G   ++ K +     +L         P+ ++          +   DG++  W+  T   
Sbjct: 226 QGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK 285

Query: 119 MYSIQAHDG-CIHALTYSDSYVISLGQDERLCVWDRF 154
           + +    +   +  +  SD+ +     D+        
Sbjct: 286 IKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAI 322

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 35.2 bits (79), Expect = 0.002
 Identities = 11/87 (12%), Positives = 26/87 (29%), Gaps = 5/87 (5%)

Query: 57  VITGSQDHTLKVYKLEDQQLL--FTLHGHCGPITTLFI--DGVSMMSGSGSQDGLLCVWD 112
           ++  ++   L V   E   +    T+           +   G  +   + ++   L   D
Sbjct: 4   ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGG-RIAYATVNKSESLVKID 62

Query: 113 TVTGACMYSIQAHDGCIHALTYSDSYV 139
            VTG  +  I          +   + +
Sbjct: 63  LVTGETLGRIDLSTPEERVKSLFGAAL 89

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	166
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.94
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.94
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.94
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.94
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.93
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.93
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.93
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.92
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.92
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.92
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.91
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.91
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.91
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.91
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.91
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.9
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.9
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.9
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.9
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.89
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.89
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.88
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.87
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.87
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.84
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.84
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.81
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.8
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.72
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.65
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.62
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.61
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.59
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.59
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.51
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.5
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.5
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.45
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.43
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.42
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.39
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.19
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.15
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.1
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	98.94
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.86
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	98.81
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	98.8
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.7
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	98.66
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.11
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.09
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	97.76
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	97.66
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	97.64
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	97.58
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	97.55
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	97.53
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	97.28
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	97.13
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.05
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.02
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	97.01
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	96.99
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	96.97
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	96.53
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	96.43
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	96.0
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	95.5
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	95.47
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	95.42
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	95.33
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	95.29
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	94.78
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	94.78
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	94.31
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	94.11
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	94.04
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	94.01
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	93.28
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	92.56
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	90.77
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	88.39
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	87.64
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	86.62
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	85.66
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	84.51

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.94  E-value=1.2e-25  Score=153.39  Aligned_cols=155  Identities=13%  Similarity=0.172  Sum_probs=134.7

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEec--CCeEEEEEcccccceeh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQ--DHTLKVYKLEDQQLLFT   79 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~--d~~v~v~~~~~~~~~~~   79 (166)
                      ++.+.+|++|+.|+.+++|+......     .....+.+|..+|.+++|  ++.+|++++.  +..+++|++++++....
T Consensus        67 sp~g~~latg~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~  141 (311)
T d1nr0a1          67 SPSGYYCASGDVHGNVRIWDTTQTTH-----ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGN  141 (311)
T ss_dssp             CTTSSEEEEEETTSEEEEEESSSTTC-----CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBC
T ss_pred             eCCCCeEeccccCceEeeeeeecccc-----ccccccccccCcccccccccccccccccccccccccccccccccccccc
Confidence            45678899999999999999865542     223356789999999999  7788888875  46699999999999999


Q ss_pred             hcCCCCceEEEEEcCCCCE-EEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcc
Q psy16373         80 LHGHCGPITTLFIDGVSMM-SGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQG  156 (166)
Q Consensus        80 ~~~~~~~v~~~~~~~~~~~-~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~  156 (166)
                      +.+|...|.+++|+|++.+ +++|+.|+.|++||+++++....+..|..+|+++.|+|  +.+++++.|+.|++||.+++
T Consensus       142 l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~  221 (311)
T d1nr0a1         142 LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG  221 (311)
T ss_dssp             CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred             ccccccccccccccccceeeecccccccccccccccccccccccccccccccccccCccccccccccccccccccccccc
Confidence            9999999999999999774 88899999999999999999999999999999999998  58999999999999999998


Q ss_pred             cceeeee
Q psy16373        157 HLLSTIQ  163 (166)
Q Consensus       157 ~~~~~~~  163 (166)
                      +.+..++
T Consensus       222 ~~~~~~~  228 (311)
T d1nr0a1         222 TKTGVFE  228 (311)
T ss_dssp             CEEEECB
T ss_pred             ccccccc
Confidence            8776654

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=1.5e-25  Score=157.10  Aligned_cols=159  Identities=17%  Similarity=0.229  Sum_probs=124.3

Q ss_pred             eEEEEecCCCceEEEeecccccceee-----------ceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccc
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTL-----------TCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQ   74 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~   74 (166)
                      ...+++++.++.+.+|+.........           ..........+...+.+++| ...+|++|+.|+.|++||++++
T Consensus       136 ~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~  215 (393)
T d1sq9a_         136 SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTL  215 (393)
T ss_dssp             CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTT
T ss_pred             ccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCCEEEEEeCCCcEEEEeeccc
Confidence            45678888899999988643211000           00111122345566889999 5569999999999999999988


Q ss_pred             ccee------hhcCCCCceEEEEEcCCCCEEEEecCCCc---EEEEeCcCCeeeEEee-------------cccccEEEE
Q psy16373         75 QLLF------TLHGHCGPITTLFIDGVSMMSGSGSQDGL---LCVWDTVTGACMYSIQ-------------AHDGCIHAL  132 (166)
Q Consensus        75 ~~~~------~~~~~~~~v~~~~~~~~~~~~~~~~~d~~---v~~~d~~~~~~~~~~~-------------~~~~~v~~i  132 (166)
                      +++.      .+.+|..+|.+++|+|+++++++|+.|++   +++||+++++.+..+.             +|.+.|+++
T Consensus       216 ~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l  295 (393)
T d1sq9a_         216 RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSL  295 (393)
T ss_dssp             EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEE
T ss_pred             ccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeee
Confidence            7654      34568999999999999999999998874   8999999998877764             789999999


Q ss_pred             EEcC--CeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        133 TYSD--SYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       133 ~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      +|+|  ++|++++.|++|++||+++++++.+++.+
T Consensus       296 ~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH  330 (393)
T d1sq9a_         296 SFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMH  330 (393)
T ss_dssp             EECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             ccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCc
Confidence            9998  49999999999999999999999888643

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.94  E-value=2.1e-25  Score=152.05  Aligned_cols=140  Identities=20%  Similarity=0.240  Sum_probs=123.8

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehh--c
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTL--H   81 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~--~   81 (166)
                      ....+++|..++.+++|+.....       ...++.+|..+|.+++|  ++++|++|+.|+.+++|++...+....+  .
T Consensus       195 ~~~~~~~~~~d~~v~i~d~~~~~-------~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~  267 (340)
T d1tbga_         195 DTRLFVSGACDASAKLWDVREGM-------CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD  267 (340)
T ss_dssp             TSSEEEEEETTTEEEEEETTTTE-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT
T ss_pred             ccceeEEeecCceEEEEECCCCc-------EEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccc
Confidence            45678889999999999875432       34567789999999999  7889999999999999999988766544  3


Q ss_pred             CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEE
Q psy16373         82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWD  152 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd  152 (166)
                      .+...+.+++|+|++.++++|+.||.|++||+.+++++..+.+|.++|++++|+|  .+|++|+.|+.|++||
T Consensus       268 ~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         268 NIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             TCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             cccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            5677899999999999999999999999999999999999999999999999998  4899999999999997

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.94  E-value=3.7e-25  Score=150.92  Aligned_cols=153  Identities=16%  Similarity=0.246  Sum_probs=128.1

Q ss_pred             ceEEEEecCC--CceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCc-EEEEEecCCeEEEEEcccccceehh
Q psy16373          6 HRIHLRTGSA--GSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSN-RVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         6 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~-~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      .+..+++++.  +..+.+|+.+...       ...++.+|...|.+++|  +++ .|++|+.|+.|++||+++++....+
T Consensus       113 d~~~l~~~~~~~~~~~~v~~~~~~~-------~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~  185 (311)
T d1nr0a1         113 ESKRIAAVGEGRERFGHVFLFDTGT-------SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF  185 (311)
T ss_dssp             TSCEEEEEECCSSCSEEEEETTTCC-------BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEE
T ss_pred             ccccccccccccccccccccccccc-------ccccccccccccccccccccceeeeccccccccccccccccccccccc
Confidence            3445555554  3457777765432       33456789999999999  455 5889999999999999999999999


Q ss_pred             cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee-------cccccEEEEEEcC--CeEEEeecCCcEEEE
Q psy16373         81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ-------AHDGCIHALTYSD--SYVISLGQDERLCVW  151 (166)
Q Consensus        81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~-------~~~~~v~~i~~~~--~~l~~~~~d~~i~~w  151 (166)
                      ..|..+|.++.++|+++++++++.|+.+++||++++.....+.       +|...|++++|+|  ++|++++.|+.|++|
T Consensus       186 ~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iw  265 (311)
T d1nr0a1         186 GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIW  265 (311)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             ccccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEE
Confidence            9999999999999999999999999999999999888776653       5778999999998  599999999999999


Q ss_pred             ECCcccceeeeeec
Q psy16373        152 DRFQGHLLSTIQLQ  165 (166)
Q Consensus       152 d~~~~~~~~~~~~~  165 (166)
                      |+++++++++++.+
T Consensus       266 d~~t~~~~~~l~~~  279 (311)
T d1nr0a1         266 NVATLKVEKTIPVG  279 (311)
T ss_dssp             ETTTTEEEEEEECC
T ss_pred             ECCCCcEEEEEECC
Confidence            99999998887643

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.4e-24  Score=147.20  Aligned_cols=158  Identities=18%  Similarity=0.215  Sum_probs=133.2

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc--cceeh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ--QLLFT   79 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~--~~~~~   79 (166)
                      +..+.+|++|+ ++.+++|+........  ........+|..+|.+++|  ++++|++|+.|+.|++||+...  +....
T Consensus        60 s~~g~~latg~-dg~V~iWd~~~~~~~~--~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~  136 (337)
T d1gxra_          60 SNPTRHVYTGG-KGCVKVWDISHPGNKS--PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAE  136 (337)
T ss_dssp             CSSSSEEEEEC-BSEEEEEETTSTTCCS--CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEE
T ss_pred             CCCCCEEEEEE-CCEEEEEEccCCcccc--eeEEeeecCCCCcEEEEEEcCCCCEEEEeecccccccccccccccccccc
Confidence            45567889988 6789999986543221  1223344578999999999  8899999999999999998754  45566


Q ss_pred             hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373         80 LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus        80 ~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      +..|...+.+++++|++..+++++.|+.+++||+++++.......|...+.+++|++  ..+++++.|+.+++||+++++
T Consensus       137 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~  216 (337)
T d1gxra_         137 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR  216 (337)
T ss_dssp             EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce
Confidence            778999999999999999999999999999999999999999999999999999998  489999999999999999998


Q ss_pred             ceeeeee
Q psy16373        158 LLSTIQL  164 (166)
Q Consensus       158 ~~~~~~~  164 (166)
                      .+..+..
T Consensus       217 ~~~~~~~  223 (337)
T d1gxra_         217 QLQQHDF  223 (337)
T ss_dssp             EEEEEEC
T ss_pred             eeccccc
Confidence            8877654

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=1.7e-24  Score=145.66  Aligned_cols=141  Identities=21%  Similarity=0.366  Sum_probs=123.0

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe----------------------cCcEEEEEec
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC----------------------VSNRVITGSQ   62 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----------------------~~~~l~~~~~   62 (166)
                      ..+..+++++.++.+++|+.....       ....+.+|...+.++++                      .+..+++++.
T Consensus       153 ~~~~~l~~~~~d~~v~~~~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (317)
T d1vyhc1         153 QDGTLIASCSNDQTVRVWVVATKE-------CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR  225 (317)
T ss_dssp             TTSSEEEEEETTSCEEEEETTTCC-------EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEET
T ss_pred             cCCCEEEEEeCCCeEEEEeeccce-------eeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccC
Confidence            345678999999999999876543       22345566667777665                      2357899999


Q ss_pred             CCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEE
Q psy16373         63 DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVI  140 (166)
Q Consensus        63 d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~  140 (166)
                      |+.|++||+.+++++..+.+|...|.+++++|+++++++++.||.|++||+++++++..+.+|.++|++++|+|  ++|+
T Consensus       226 d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~  305 (317)
T d1vyhc1         226 DKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV  305 (317)
T ss_dssp             TSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEE
T ss_pred             CCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998  4899


Q ss_pred             EeecCCcEEEEE
Q psy16373        141 SLGQDERLCVWD  152 (166)
Q Consensus       141 ~~~~d~~i~~wd  152 (166)
                      +++.|+.|++||
T Consensus       306 s~s~Dg~i~iWd  317 (317)
T d1vyhc1         306 TGSVDQTVKVWE  317 (317)
T ss_dssp             EEETTSEEEEEC
T ss_pred             EEeCCCeEEEeC
Confidence            999999999997

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.6e-24  Score=150.71  Aligned_cols=149  Identities=17%  Similarity=0.213  Sum_probs=119.1

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccc-------
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQL-------   76 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~-------   76 (166)
                      .+..+++|+.++.+.+|+..................+|..+|.+++|  ++++|++++.|+.|++||+.+++.       
T Consensus       216 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~  295 (388)
T d1erja_         216 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP  295 (388)
T ss_dssp             TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred             CCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccc
Confidence            45688999999999999986554333222233345678999999999  788999999999999999976543       


Q ss_pred             -----eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEc------C--CeEEEee
Q psy16373         77 -----LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYS------D--SYVISLG  143 (166)
Q Consensus        77 -----~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~------~--~~l~~~~  143 (166)
                           ......|...|.+++|+|++.++++|+.||.|++||+++++++..+++|.+.|.++++.      |  ++|++|+
T Consensus       296 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s  375 (388)
T d1erja_         296 NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS  375 (388)
T ss_dssp             ---CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred             cccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEe
Confidence                 22344678899999999999999999999999999999999999999999999999864      3  3899999


Q ss_pred             cCCcEEEEECC
Q psy16373        144 QDERLCVWDRF  154 (166)
Q Consensus       144 ~d~~i~~wd~~  154 (166)
                      .|+.|++|+++
T Consensus       376 ~Dg~I~iW~~~  386 (388)
T d1erja_         376 GDCKARIWKYK  386 (388)
T ss_dssp             TTSEEEEEEEE
T ss_pred             CCCEEEEEeee
Confidence            99999999974

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.92  E-value=8.8e-24  Score=146.98  Aligned_cols=149  Identities=10%  Similarity=0.087  Sum_probs=123.8

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccc--ceeh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ--LLFT   79 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~--~~~~   79 (166)
                      +..+.++++|+.++.+++|+.....     ......+.+|..+|.+++|  ++++|++++.|+.|++||+.++.  ....
T Consensus        16 s~dg~~la~~~~~~~i~iw~~~~~~-----~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~   90 (371)
T d1k8kc_          16 NKDRTQIAICPNNHEVHIYEKSGNK-----WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLV   90 (371)
T ss_dssp             CTTSSEEEEECSSSEEEEEEEETTE-----EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred             CCCCCEEEEEeCCCEEEEEECCCCC-----EEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccccccc
Confidence            3466789999999999999975432     2345567899999999999  78999999999999999998764  3445


Q ss_pred             hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee----eEEeecccccEEEEEEcC--CeEEEeecCCcEEEEEC
Q psy16373         80 LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC----MYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDR  153 (166)
Q Consensus        80 ~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~----~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~  153 (166)
                      +..|...|.+++|+|+++.+++++.|+.+++|++.....    ......|...|.+++|+|  .+|++++.|+.|++||.
T Consensus        91 ~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~  170 (371)
T d1k8kc_          91 ILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA  170 (371)
T ss_dssp             CCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred             cccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEEEEEee
Confidence            567889999999999999999999999999999876543    233456888999999998  48999999999999998


Q ss_pred             Cccc
Q psy16373        154 FQGH  157 (166)
Q Consensus       154 ~~~~  157 (166)
                      ....
T Consensus       171 ~~~~  174 (371)
T d1k8kc_         171 YIKE  174 (371)
T ss_dssp             CCTT
T ss_pred             ccCc
Confidence            7644

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.92  E-value=3.6e-23  Score=140.86  Aligned_cols=154  Identities=16%  Similarity=0.159  Sum_probs=123.1

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcc---------
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLE---------   72 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~---------   72 (166)
                      ++.+.+|++|+.|+.+++|+.....       ....+..|..+|.+++|  ++.++++|+.|+.+.+|+..         
T Consensus        64 s~~~~~l~sgs~Dg~v~iWd~~~~~-------~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~  136 (340)
T d1tbga_          64 GTDSRLLVSASQDGKLIIWDSYTTN-------KVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVS  136 (340)
T ss_dssp             CTTSSEEEEEETTTEEEEEETTTTE-------EEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCSCCCEE
T ss_pred             CCCCCEEEEEECCCceeeeecccce-------eEEEEecccccEEeeEeeccceeeeeecccceeecccccccccccccc
Confidence            4567789999999999999976433       23345667777777777  56667777777776666643         


Q ss_pred             ------------------------------------------------------------------------------cc
Q psy16373         73 ------------------------------------------------------------------------------DQ   74 (166)
Q Consensus        73 ------------------------------------------------------------------------------~~   74 (166)
                                                                                                    ++
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~  216 (340)
T d1tbga_         137 RELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG  216 (340)
T ss_dssp             EEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTT
T ss_pred             eecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEEEEECCCC
Confidence                                                                                          34


Q ss_pred             cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee--cccccEEEEEEcC--CeEEEeecCCcEEE
Q psy16373         75 QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ--AHDGCIHALTYSD--SYVISLGQDERLCV  150 (166)
Q Consensus        75 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~--~~~~~v~~i~~~~--~~l~~~~~d~~i~~  150 (166)
                      +.+..+.+|...|.+++|+|++.++++++.|+.+++||++....+..+.  .+...|.+++|+|  .+|++++.|+.|++
T Consensus       217 ~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~i  296 (340)
T d1tbga_         217 MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV  296 (340)
T ss_dssp             EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEE
T ss_pred             cEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEEEECCCEEEE
Confidence            4455567789999999999999999999999999999999888777653  4566899999998  48999999999999


Q ss_pred             EECCcccceeeeee
Q psy16373        151 WDRFQGHLLSTIQL  164 (166)
Q Consensus       151 wd~~~~~~~~~~~~  164 (166)
                      ||+.+++++.++..
T Consensus       297 wd~~~~~~~~~~~~  310 (340)
T d1tbga_         297 WDALKADRAGVLAG  310 (340)
T ss_dssp             EETTTCCEEEEECC
T ss_pred             EECCCCcEEEEEcC
Confidence            99999999888764

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.92  E-value=2.7e-23  Score=144.49  Aligned_cols=156  Identities=12%  Similarity=0.103  Sum_probs=128.3

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccc----e
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQL----L   77 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~----~   77 (166)
                      ++.+.+|++|+.|+.+++|+.....     ......+.+|...|.+++|  +++.|++++.|+.+++|++.....    .
T Consensus        60 sp~~~~l~s~s~D~~i~vWd~~~~~-----~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~  134 (371)
T d1k8kc_          60 APDSNRIVTCGTDRNAYVWTLKGRT-----WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCK  134 (371)
T ss_dssp             ETTTTEEEEEETTSCEEEEEEETTE-----EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEE
T ss_pred             CCCCCEEEEEECCCeEEEEeecccc-----cccccccccccccccccccccccccceeecccCcceeeeeeccccccccc
Confidence            3456689999999999999976433     1233345678899999999  888999999999999999876543    2


Q ss_pred             ehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC------------------eeeEEeecccccEEEEEEcC--C
Q psy16373         78 FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG------------------ACMYSIQAHDGCIHALTYSD--S  137 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~------------------~~~~~~~~~~~~v~~i~~~~--~  137 (166)
                      .....|...|.+++|+|++.++++++.|+.+++||....                  ..+.....|...|.+++|+|  +
T Consensus       135 ~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~  214 (371)
T d1k8kc_         135 HIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS  214 (371)
T ss_dssp             EECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS
T ss_pred             ccccccccccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccc
Confidence            334568899999999999999999999999999997542                  24555667888999999998  5


Q ss_pred             eEEEeecCCcEEEEECCcccceeeeee
Q psy16373        138 YVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       138 ~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .+++++.|+.|++||+.+++.+..+..
T Consensus       215 ~l~s~~~d~~i~iwd~~~~~~~~~~~~  241 (371)
T d1k8kc_         215 RVAWVSHDSTVCLADADKKMAVATLAS  241 (371)
T ss_dssp             EEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred             cccccccCCcceEEeeecccceeeeec
Confidence            899999999999999999988877764

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=5.2e-23  Score=140.45  Aligned_cols=151  Identities=21%  Similarity=0.313  Sum_probs=124.5

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccc-------
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQL-------   76 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~-------   76 (166)
                      +.+.+|++|+.|+.+++|+....       ..+.++.+|..+|.+++| .+++|++|+.|+.|++|+....+.       
T Consensus        21 ~~~~~l~tgs~Dg~i~vWd~~~~-------~~~~~l~~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~   93 (355)
T d1nexb2          21 FEDNYVITGADDKMIRVYDSINK-------KFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGH   93 (355)
T ss_dssp             EETTEEEEEETTTEEEEEETTTT-------EEEEEEECCSSCEEEEEEETTTEEEEEETTCCEEEEETTTTEEEEEECCC
T ss_pred             ECCCEEEEEeCCCeEEEEECCCC-------cEEEEEECCCCCEEEEEEcCCCEEEEEecccccccccccccccccccccc
Confidence            34568999999999999997643       345577899999999999 778899999999999998762111       


Q ss_pred             --------------------------------------------------------------------------------
Q psy16373         77 --------------------------------------------------------------------------------   76 (166)
Q Consensus        77 --------------------------------------------------------------------------------   76 (166)
                                                                                                      
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  173 (355)
T d1nexb2          94 NSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNI  173 (355)
T ss_dssp             SSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTE
T ss_pred             cccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccccccccccccce
Confidence                                                                                            


Q ss_pred             --------------------eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC
Q psy16373         77 --------------------LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD  136 (166)
Q Consensus        77 --------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~  136 (166)
                                          +....++...+.++.++|.+..+++++.|+.+++||++++..+..+.+|...|.++++++
T Consensus       174 ~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~~  253 (355)
T d1nexb2         174 VVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD  253 (355)
T ss_dssp             EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEECS
T ss_pred             eeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeecccccccccccccccccccccccc
Confidence                                001122444566788899999999999999999999999999999999999999999999


Q ss_pred             CeEEEeecCCcEEEEECCcccceeee
Q psy16373        137 SYVISLGQDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       137 ~~l~~~~~d~~i~~wd~~~~~~~~~~  162 (166)
                      +++++++.|+.|++||++++......
T Consensus       254 ~~l~~~~~dg~i~iwd~~~~~~~~~~  279 (355)
T d1nexb2         254 KFLVSAAADGSIRGWDANDYSRKFSY  279 (355)
T ss_dssp             SEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             ceeeeeecccccccccccccceeccc
Confidence            99999999999999999887765443

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=2.5e-22  Score=134.98  Aligned_cols=153  Identities=20%  Similarity=0.345  Sum_probs=134.9

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      ....+++++.++.+.+|+.....       ....+.+|...+.++++  ++.+|++++.|+.+++|+..+++....+..|
T Consensus       112 ~~~~~~~~~~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~  184 (317)
T d1vyhc1         112 NGDHIVSASRDKTIKMWEVQTGY-------CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH  184 (317)
T ss_dssp             SSSEEEEEETTSEEEEEETTTCC-------EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred             CCceEEeeccCcceeEeecccce-------eeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEecC
Confidence            45568899999999999876443       33456789999999999  7889999999999999999999999999999


Q ss_pred             CCceEEEEEcCCC--------------------CEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEE
Q psy16373         84 CGPITTLFIDGVS--------------------MMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVIS  141 (166)
Q Consensus        84 ~~~v~~~~~~~~~--------------------~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~  141 (166)
                      ...+.+++++|+.                    ..+++++.|+.+++||+++++++..+.+|...|.+++|+|  .+|++
T Consensus       185 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s  264 (317)
T d1vyhc1         185 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS  264 (317)
T ss_dssp             SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEE
T ss_pred             CCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEE
Confidence            9999999988764                    3688999999999999999999999999999999999998  48999


Q ss_pred             eecCCcEEEEECCcccceeeeeec
Q psy16373        142 LGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       142 ~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      ++.|+.|++||+++++++.++..+
T Consensus       265 ~~~dg~i~iwd~~~~~~~~~~~~h  288 (317)
T d1vyhc1         265 CADDKTLRVWDYKNKRCMKTLNAH  288 (317)
T ss_dssp             EETTTEEEEECCTTSCCCEEEECC
T ss_pred             EECCCeEEEEECCCCcEEEEEcCC
Confidence            999999999999999999887643

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=9.9e-23  Score=136.62  Aligned_cols=141  Identities=13%  Similarity=0.174  Sum_probs=113.7

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccccee-hhcCC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF-TLHGH   83 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~-~~~~~   83 (166)
                      ...++++.+++.+++|+......      .......|..++.+++|  ++.+|++|+.|+.|++||+.+++... .+.+|
T Consensus       131 ~~~~v~~~~~~~v~~~~~~~~~~------~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h  204 (287)
T d1pgua2         131 NYVAVGLEEGNTIQVFKLSDLEV------SFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFR  204 (287)
T ss_dssp             SEEEEEETTTSCEEEEETTEEEE------EEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCC
T ss_pred             cceeeeccccceeeeeeccccce------eeeeeeccCCceeEEEeccCccccccccccccccceeeccccccccccccc
Confidence            34556666667888888643321      11122357788999999  78899999999999999999887654 46789


Q ss_pred             CCceEEEEEcCC----------CCEEEEecCCCcEEEEeCcC-CeeeEEeecccccEEEEEEcC-CeEEEeecCCcEEEE
Q psy16373         84 CGPITTLFIDGV----------SMMSGSGSQDGLLCVWDTVT-GACMYSIQAHDGCIHALTYSD-SYVISLGQDERLCVW  151 (166)
Q Consensus        84 ~~~v~~~~~~~~----------~~~~~~~~~d~~v~~~d~~~-~~~~~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~w  151 (166)
                      ...|.+++|+|.          +.++++|+.|+.+++||+++ .+.+..+.+|.+.|++++|+| +.+++++.|+.|++|
T Consensus       205 ~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~~l~s~g~D~~v~iW  284 (287)
T d1pgua2         205 TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRW  284 (287)
T ss_dssp             SSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTEEEEEETTSCEEEE
T ss_pred             ccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCCEEEEEECCCeEEEE
Confidence            999999999874          46899999999999999976 456677788999999999998 589999999999999


Q ss_pred             EC
Q psy16373        152 DR  153 (166)
Q Consensus       152 d~  153 (166)
                      ++
T Consensus       285 ~i  286 (287)
T d1pgua2         285 NV  286 (287)
T ss_dssp             EE
T ss_pred             EE
Confidence            96

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1.2e-22  Score=142.11  Aligned_cols=120  Identities=15%  Similarity=0.181  Sum_probs=99.2

Q ss_pred             EEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCC---eEEEEEcccccceehh---
Q psy16373          9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDH---TLKVYKLEDQQLLFTL---   80 (166)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~---~v~v~~~~~~~~~~~~---   80 (166)
                      .+++|+.|+.+++|+...... .........+.+|..+|.+++|  ++++|++|+.|+   .|++||+++++.+..+   
T Consensus       197 ~lasgs~Dg~i~iwd~~~~~~-~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~  275 (393)
T d1sq9a_         197 LIATGFNNGTVQISELSTLRP-LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVP  275 (393)
T ss_dssp             EEEEECTTSEEEEEETTTTEE-EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC
T ss_pred             EEEEEeCCCcEEEEeeccccc-ccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccc
Confidence            788999999999999865432 1222344566789999999999  889999999887   4899999988766554   


Q ss_pred             ----------cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccE
Q psy16373         81 ----------HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCI  129 (166)
Q Consensus        81 ----------~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v  129 (166)
                                .+|...|++++|+|+++++++++.|++|++||+++++++..+.+|.+.|
T Consensus       276 ~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v  334 (393)
T d1sq9a_         276 THSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDI  334 (393)
T ss_dssp             --------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGC
T ss_pred             cccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCcCCcc
Confidence                      4799999999999999999999999999999999999999999886544

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.91  E-value=1.4e-22  Score=136.45  Aligned_cols=144  Identities=15%  Similarity=0.184  Sum_probs=114.9

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccce---eh
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL---FT   79 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~---~~   79 (166)
                      +.+..+++|+.++.+.+|+.......      ......|..+|.+++|  ++.+|++++.|+.|++||+.++...   ..
T Consensus       146 ~~~~~l~~g~~dg~i~~~d~~~~~~~------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~  219 (299)
T d1nr0a2         146 NDKQFVAVGGQDSKVHVYKLSGASVS------EVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNS  219 (299)
T ss_dssp             TTSCEEEEEETTSEEEEEEEETTEEE------EEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCC
T ss_pred             cccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            45568889999999999987543311      1123468899999999  7889999999999999999876544   34


Q ss_pred             hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE--Eeec-ccccEEEEEEcC-CeEEEeecCCcEEEEECC
Q psy16373         80 LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY--SIQA-HDGCIHALTYSD-SYVISLGQDERLCVWDRF  154 (166)
Q Consensus        80 ~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~--~~~~-~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~  154 (166)
                      +.+|...|.+++|+|++.++++|+.|+.+++||++++....  .... +...+..+.|.+ +.|++++.|+.|++||+.
T Consensus       220 ~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         220 WTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             CCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred             ccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEECCCCEEEEEeCCCEEEEEecc
Confidence            56789999999999999999999999999999998764332  2233 345778887765 699999999999999973

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1e-21  Score=134.74  Aligned_cols=150  Identities=15%  Similarity=0.153  Sum_probs=130.5

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      ..+..|++|+.|+.+++|+.....     ......+..|...+.++++  ++.++++++.|+.+++|++.+++.......
T Consensus       107 ~dg~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~  181 (337)
T d1gxra_         107 PDGCTLIVGGEASTLSIWDLAAPT-----PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG  181 (337)
T ss_dssp             TTSSEEEEEESSSEEEEEECCCC-------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred             CCCCEEEEeecccccccccccccc-----ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            456678999999999999875433     1233456788999999999  788999999999999999999998888889


Q ss_pred             CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccccee
Q psy16373         83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus        83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      |...+.++++++++..+++++.|+.+++||+++++.+..+. |...|.+++|+|  +.+++++.|+.+++||+++++...
T Consensus       182 ~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  260 (337)
T d1gxra_         182 HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ  260 (337)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE
T ss_pred             cccccccccccccccccccccccccccccccccceeecccc-cccceEEEEEcccccccceecccccccccccccccccc
Confidence            99999999999999999999999999999999999887765 788999999998  589999999999999999887654

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=8e-22  Score=131.22  Aligned_cols=150  Identities=24%  Similarity=0.354  Sum_probs=122.7

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceeh-----
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFT-----   79 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~-----   79 (166)
                      +.+.+|++|+.|+.+++|+....+       .+.++++|..+|.+++|++++|++|+.|+.+++|++..+.....     
T Consensus        23 ~d~~~l~sgs~Dg~i~vWd~~~~~-------~~~~l~~H~~~V~~v~~~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~   95 (293)
T d1p22a2          23 YDDQKIVSGLRDNTIKIWDKNTLE-------CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHC   95 (293)
T ss_dssp             CCSSEEEEEESSSCEEEEESSSCC-------EEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCC
T ss_pred             EcCCEEEEEeCCCeEEEEECCCCc-------EEEEEecCCCCEeeeecccceeecccccccccccccccccccccccccc
Confidence            456789999999999999975432       44567899999999999999999999999999999975432111     


Q ss_pred             --------------------------------------hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373         80 --------------------------------------LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS  121 (166)
Q Consensus        80 --------------------------------------~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~  121 (166)
                                                            +..|...+..+.+.  ...+++++.|+.+++||+++++.+..
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~~i~~~d~~~~~~~~~  173 (293)
T d1p22a2          96 EAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRT  173 (293)
T ss_dssp             SCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred             cccccccccccceeecccccceeEeeccccccccccccccccccccccceec--ccccccccCCCceeeecCCCCcEEEE
Confidence                                                  12344455555554  35677888999999999999999999


Q ss_pred             eecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeee
Q psy16373        122 IQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       122 ~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      +.++...+..+.+++..+++++.|+.|++||+++++.+..+.
T Consensus       174 ~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  215 (293)
T d1p22a2         174 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE  215 (293)
T ss_dssp             EECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             EcccccccccccCCCCeEEEecCCCEEEEEecccceeeeeec
Confidence            999999999999999999999999999999999988877654

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.3e-21  Score=132.82  Aligned_cols=147  Identities=21%  Similarity=0.444  Sum_probs=126.0

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCce
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPI   87 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v   87 (166)
                      ..++.++.++.+++|+.....       ....+.+|...+.++.+++..+++++.|+.|++||++.++.+..+.+|...+
T Consensus       148 ~~~~~~~~d~~i~~~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v  220 (342)
T d2ovrb2         148 RRVVSGAYDFMVKVWDPETET-------CLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT  220 (342)
T ss_dssp             SCEEEEETTSCEEEEEGGGTE-------EEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCE
T ss_pred             ceeeeecCCCeEEEeecccce-------eeEEEcCcccccccccCCCCEEEEEeCCCeEEEeecccceeeeEecccccce
Confidence            356677778888888765432       3445678888888888899999999999999999999999999999999999


Q ss_pred             EEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec---ccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeee
Q psy16373         88 TTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA---HDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus        88 ~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~---~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      .++++++  +++++++.|+.+++||+...+....+..   |...+.++.++++++++++.||.|++||+++++.++++.
T Consensus       221 ~~~~~~~--~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~  297 (342)
T d2ovrb2         221 SGMELKD--NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLV  297 (342)
T ss_dssp             EEEEEET--TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             eEEecCC--CEEEEEcCCCEEEEEecccccccccccccceeeeceeecccCCCeeEEEcCCCEEEEEECCCCCEEEEEe
Confidence            9988865  6999999999999999998888777754   556888999999999999999999999999999988775

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=8e-22  Score=134.85  Aligned_cols=147  Identities=15%  Similarity=0.181  Sum_probs=116.9

Q ss_pred             ecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cC-cEEEEEecCCeEEEEEcccccceeh---hcCCCC
Q psy16373         12 TGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VS-NRVITGSQDHTLKVYKLEDQQLLFT---LHGHCG   85 (166)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~-~~l~~~~~d~~v~v~~~~~~~~~~~---~~~~~~   85 (166)
                      +++.++.+.+|.....       .....+.+|...|.+++|  ++ ..+++++.|+.+++||..+.+....   ...|..
T Consensus       134 ~~~~~~~~~~~~~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~  206 (325)
T d1pgua1         134 GEGRDNFGVFISWDSG-------NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGS  206 (325)
T ss_dssp             ECCSSCSEEEEETTTC-------CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTC
T ss_pred             eccccceEEEEeeccc-------ccceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCC
Confidence            3344556666665432       234456789999999999  33 4578899999999999987765443   345778


Q ss_pred             ceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEE----EEEEcC-CeEEEeecCCcEEEEECCcccce
Q psy16373         86 PITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIH----ALTYSD-SYVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        86 ~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~----~i~~~~-~~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      .|.+++|+|+ +.++++++.|+.|++||+++++.+..+.+|..++.    ++.|.+ .+|++++.|+.|++||+++++++
T Consensus       207 ~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~  286 (325)
T d1pgua1         207 FVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCV  286 (325)
T ss_dssp             CEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred             ccEEeeeccccceeccccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEE
Confidence            8999999997 78999999999999999999999999988877654    444444 58999999999999999999998


Q ss_pred             eeeeec
Q psy16373        160 STIQLQ  165 (166)
Q Consensus       160 ~~~~~~  165 (166)
                      ..+..+
T Consensus       287 ~~~~~~  292 (325)
T d1pgua1         287 QKWTLD  292 (325)
T ss_dssp             EEEECC
T ss_pred             EEEEec
Confidence            887653

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=2e-21  Score=132.85  Aligned_cols=158  Identities=16%  Similarity=0.193  Sum_probs=128.5

Q ss_pred             eEEEEecCCCceEEEeeccccccee-eceeeeeeeeccCCceEEEEe--cCcEEEEEec--CCeEEEEEcccccceehhc
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMT-LTCCKVESTRAHHQPITVLEC--VSNRVITGSQ--DHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~--d~~v~v~~~~~~~~~~~~~   81 (166)
                      +.++++|+.|+.+++|+........ ........+..|..+|.+++|  ++.++++++.  ++.+++|+..+++.+..+.
T Consensus        77 g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (325)
T d1pgua1          77 SQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVS  156 (325)
T ss_dssp             CCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECC
T ss_pred             CCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeee
Confidence            4578999999999999986543222 122223345678899999999  7788777654  6789999999999999999


Q ss_pred             CCCCceEEEEEcCCCCE-EEEecCCCcEEEEeCcCCeeeEEee---cccccEEEEEEcC---CeEEEeecCCcEEEEECC
Q psy16373         82 GHCGPITTLFIDGVSMM-SGSGSQDGLLCVWDTVTGACMYSIQ---AHDGCIHALTYSD---SYVISLGQDERLCVWDRF  154 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~-~~~~~~d~~v~~~d~~~~~~~~~~~---~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~  154 (166)
                      +|...|.+++|+|++.. +++++.|+.+++||.++.+....+.   .|...|.+++|+|   .++++++.|+.|++||++
T Consensus       157 ~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~  236 (325)
T d1pgua1         157 GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK  236 (325)
T ss_dssp             SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT
T ss_pred             ecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeec
Confidence            99999999999998664 7789999999999998877666553   4567899999998   488999999999999999


Q ss_pred             cccceeeeee
Q psy16373        155 QGHLLSTIQL  164 (166)
Q Consensus       155 ~~~~~~~~~~  164 (166)
                      +++.+.+++.
T Consensus       237 ~~~~~~~l~~  246 (325)
T d1pgua1         237 SGEFLKYIED  246 (325)
T ss_dssp             TCCEEEECCB
T ss_pred             cccccccccc
Confidence            9998887753

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.4e-21  Score=132.60  Aligned_cols=150  Identities=26%  Similarity=0.385  Sum_probs=120.4

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccc--------
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQL--------   76 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~--------   76 (166)
                      +.+.+|++|+.|+.+++|+....+       .+.++.+|..+|.++++.+++|++++.|+.+++|+......        
T Consensus        25 ~~g~~l~sgs~Dg~i~vWd~~~~~-------~~~~~~~h~~~V~~v~~~~~~l~s~s~D~~~~~~~~~~~~~~~~~~~~~   97 (342)
T d2ovrb2          25 FCGNRIVSGSDDNTLKVWSAVTGK-------CLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHT   97 (342)
T ss_dssp             EETTEEEEEETTSCEEEEETTTCC-------EEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred             ECCCEEEEEeCCCeEEEEECCCCC-------EEEEEeCCCCCEEEEEeCCCccccceecccccccccccccceecccccc
Confidence            456689999999999999976433       44567899999999999888999999999999998762211        


Q ss_pred             ------------------------------------------------------------------------eehhcCCC
Q psy16373         77 ------------------------------------------------------------------------LFTLHGHC   84 (166)
Q Consensus        77 ------------------------------------------------------------------------~~~~~~~~   84 (166)
                                                                                              +..+.+|.
T Consensus        98 ~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~  177 (342)
T d2ovrb2          98 STVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT  177 (342)
T ss_dssp             SCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCS
T ss_pred             eeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEEeecccceeeEEEcCcc
Confidence                                                                                    11112233


Q ss_pred             CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeee
Q psy16373         85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      ..+.  .+.+++..+++++.||.|++||++.++++..+.+|...+.++.++++++++++.|+.|++||+...+....+.
T Consensus       178 ~~~~--~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~  254 (342)
T d2ovrb2         178 NRVY--SLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQ  254 (342)
T ss_dssp             SCEE--EEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             cccc--cccCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCCCEEEEEcCCCEEEEEeccccccccccc
Confidence            3333  3344678899999999999999999999999999999999999999999999999999999998887766554

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=4e-21  Score=133.30  Aligned_cols=148  Identities=18%  Similarity=0.300  Sum_probs=119.3

Q ss_pred             ecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc--------
Q psy16373         12 TGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH--------   81 (166)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~--------   81 (166)
                      .+..++...+|+........   ..+....+|.+.|+|++|  ++++|++|+ |+.|++||+.+++.+..+.        
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~---~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~  108 (388)
T d1erja_          33 KKQTNDYYILYNPALPREID---VELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKD  108 (388)
T ss_dssp             EEECSSCEEEECTTSCCCEE---EEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-------
T ss_pred             ccCCCCcEEEeCCCCCccee---eeeEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeeccccccccc
Confidence            44455566667755433221   122233479999999999  788999986 8999999999877655442        


Q ss_pred             ----------CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEE
Q psy16373         82 ----------GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLC  149 (166)
Q Consensus        82 ----------~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~  149 (166)
                                .|...|.+++|+|+++++++|+.||.|++||...++.+..+.+|...|.++.+++  ..+++++.++.++
T Consensus       109 ~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~  188 (388)
T d1erja_         109 PENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVR  188 (388)
T ss_dssp             ----------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             ccccccccccCCCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccccccccccceeee
Confidence                      4566799999999999999999999999999999999999999999999999998  4899999999999


Q ss_pred             EEECCcccceeeee
Q psy16373        150 VWDRFQGHLLSTIQ  163 (166)
Q Consensus       150 ~wd~~~~~~~~~~~  163 (166)
                      +||.++...+....
T Consensus       189 ~~d~~~~~~~~~~~  202 (388)
T d1erja_         189 IWDLRTGQCSLTLS  202 (388)
T ss_dssp             EEETTTTEEEEEEE
T ss_pred             eeeccccccccccc
Confidence            99999877665543

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.87  E-value=4.8e-21  Score=130.57  Aligned_cols=123  Identities=27%  Similarity=0.440  Sum_probs=101.3

Q ss_pred             eeeeeccCCce-EEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC
Q psy16373         37 VESTRAHHQPI-TVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT  115 (166)
Q Consensus        37 ~~~~~~~~~~i-~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~  115 (166)
                      ..+++||...| +|+++++++|++|+.|+.|++||+.+++.+.++.+|.+.|.+++|+|+ ..+++++.|+.+++|+...
T Consensus         5 ~~tL~GH~~~vitc~~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~~   83 (355)
T d1nexb2           5 RTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKK   83 (355)
T ss_dssp             EEEEECCSSSCEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEETTT
T ss_pred             cEEECCcCCCcEEEEEECCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC-CEEEEEecccccccccccc
Confidence            45688998874 789999999999999999999999999999999999999999999985 5899999999999999998


Q ss_pred             CeeeEEeecccc--cEEEEEEcC--CeEEEeecCCcEEEEECCccccee
Q psy16373        116 GACMYSIQAHDG--CIHALTYSD--SYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus       116 ~~~~~~~~~~~~--~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      .+..........  ......+.+  ..+++++.|+.|++||++++..+.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~  132 (355)
T d1nexb2          84 GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVP  132 (355)
T ss_dssp             TEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----
T ss_pred             cccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceec
Confidence            887766654333  344455565  478999999999999998776543

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.5e-21  Score=128.83  Aligned_cols=137  Identities=23%  Similarity=0.412  Sum_probs=117.2

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCc
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP   86 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~   86 (166)
                      ...+++++.|+.+++|+....+       ....+.++...+..+.+++..+++++.|+.|++||+++.+.+..+.++...
T Consensus       148 ~~~~~~~s~d~~i~~~d~~~~~-------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~  220 (293)
T d1p22a2         148 DKYIVSASGDRTIKVWNTSTCE-------FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL  220 (293)
T ss_dssp             TTEEEEEETTSEEEEEETTTCC-------EEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSC
T ss_pred             ccccccccCCCceeeecCCCCc-------EEEEEcccccccccccCCCCeEEEecCCCEEEEEecccceeeeeeccccee
Confidence            4456788889999999876543       344567888899999998999999999999999999999999888888888


Q ss_pred             eEEEEEcCCCCEEEEecCCCcEEEEeCcC---------CeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEE
Q psy16373         87 ITTLFIDGVSMMSGSGSQDGLLCVWDTVT---------GACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWD  152 (166)
Q Consensus        87 v~~~~~~~~~~~~~~~~~d~~v~~~d~~~---------~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd  152 (166)
                      +..+  .+++.++++++.||.|++||++.         ..++..+.+|.+.|++++|++.+|++++.|+.|++||
T Consensus       221 v~~~--~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         221 VRCI--RFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             EEEE--ECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC
T ss_pred             eeec--cccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEcCCEEEEEecCCEEEEeC
Confidence            8765  45678999999999999999753         2467788899999999999999999999999999997

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.84  E-value=1.4e-19  Score=121.69  Aligned_cols=117  Identities=15%  Similarity=0.140  Sum_probs=98.9

Q ss_pred             CCceEEEEe--cCcEEEEEecCCeEEEEEccccccee-hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373         44 HQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF-TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY  120 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~  120 (166)
                      ...+.++++  +++++++|+.|+.+++||+++++... ....|...|.+++++|++.++++++.|+.+++||+.++..+.
T Consensus       136 ~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~  215 (299)
T d1nr0a2         136 SYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELA  215 (299)
T ss_dssp             SSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEES
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            345677888  78899999999999999998776543 334688999999999999999999999999999998875543


Q ss_pred             ---EeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccccee
Q psy16373        121 ---SIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus       121 ---~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                         .+..|..+|++++|+|  .++++++.|+.|++||++++....
T Consensus       216 ~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~  260 (299)
T d1nr0a2         216 HTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHP  260 (299)
T ss_dssp             CCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCC
T ss_pred             ccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcce
Confidence               4567889999999998  489999999999999998876543

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=1.1e-19  Score=122.85  Aligned_cols=156  Identities=10%  Similarity=0.068  Sum_probs=107.7

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~   80 (166)
                      ++.+.+|++|+.|+.+++|+.......    .......+|..+|.+++|   .+.+|++|+.|+.|++|++.........
T Consensus        20 sp~~~~L~s~s~Dg~v~iwd~~~~~~~----~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~   95 (342)
T d1yfqa_          20 IPSKSLLLITSWDGSLTVYKFDIQAKN----VDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQAL   95 (342)
T ss_dssp             EGGGTEEEEEETTSEEEEEEEETTTTE----EEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEEC
T ss_pred             eCCCCEEEEEECCCeEEEEEccCCCcc----eEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeecccccccccc
Confidence            456778999999999999998654321    122233479999999999   3458999999999999999754332221


Q ss_pred             cCC-------------------------------------------------CCceEEEEEcCCCCEEEEecCCCcEEEE
Q psy16373         81 HGH-------------------------------------------------CGPITTLFIDGVSMMSGSGSQDGLLCVW  111 (166)
Q Consensus        81 ~~~-------------------------------------------------~~~v~~~~~~~~~~~~~~~~~d~~v~~~  111 (166)
                      ..+                                                 ......+.+.+.+..+++++.|+.+++|
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~  175 (342)
T d1yfqa_          96 TNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWF  175 (342)
T ss_dssp             BSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEE
T ss_pred             cccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCCCcEEEE
Confidence            111                                                 0111233445556677788888888888


Q ss_pred             eCcCCeeeEE-------------------------------------------------------------eecccccEE
Q psy16373        112 DTVTGACMYS-------------------------------------------------------------IQAHDGCIH  130 (166)
Q Consensus       112 d~~~~~~~~~-------------------------------------------------------------~~~~~~~v~  130 (166)
                      |++.......                                                             ...|...++
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  255 (342)
T d1yfqa_         176 RLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVN  255 (342)
T ss_dssp             ESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEE
T ss_pred             ecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccce
Confidence            8753321000                                                             012334678


Q ss_pred             EEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373        131 ALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       131 ~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      +++|+|  ++|++|+.||.|++||+++++.+.++.
T Consensus       256 ~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~  290 (342)
T d1yfqa_         256 SIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA  290 (342)
T ss_dssp             EEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred             eEEecCCccEEEEECCCCEEEEEECCCCcEEEEec
Confidence            999998  599999999999999999998887664

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.81  E-value=1.2e-17  Score=111.53  Aligned_cols=114  Identities=17%  Similarity=0.239  Sum_probs=93.6

Q ss_pred             CCceEEEEecCcEEEEEecC-CeEEEEEcccccceehhc-CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE-
Q psy16373         44 HQPITVLECVSNRVITGSQD-HTLKVYKLEDQQLLFTLH-GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY-  120 (166)
Q Consensus        44 ~~~i~~~~~~~~~l~~~~~d-~~v~v~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~-  120 (166)
                      ..++.++..+++.+++++.+ +.+++|++.+.+....+. .|...+++++|+|++.++++++.||.+++||+.+++... 
T Consensus       120 ~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~  199 (287)
T d1pgua2         120 NSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTS  199 (287)
T ss_dssp             SSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEC
T ss_pred             cceeeeeeccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccc
Confidence            34556666677777777776 479999998776555444 477889999999999999999999999999999887655 


Q ss_pred             EeecccccEEEEEEcC------------CeEEEeecCCcEEEEECCccc
Q psy16373        121 SIQAHDGCIHALTYSD------------SYVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       121 ~~~~~~~~v~~i~~~~------------~~l~~~~~d~~i~~wd~~~~~  157 (166)
                      .+.+|..+|.+++|+|            .++++++.|+.|++||++++.
T Consensus       200 ~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~  248 (287)
T d1pgua2         200 RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM  248 (287)
T ss_dssp             CSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT
T ss_pred             cccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCC
Confidence            3678899999999976            279999999999999997744

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.80  E-value=5.5e-19  Score=119.42  Aligned_cols=125  Identities=15%  Similarity=0.076  Sum_probs=97.7

Q ss_pred             eeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceeh---hcCCCCceEEEEEcCC-CCEEEEecCCCcEE
Q psy16373         36 KVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFT---LHGHCGPITTLFIDGV-SMMSGSGSQDGLLC  109 (166)
Q Consensus        36 ~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~---~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~  109 (166)
                      .++..++|...|++++|  ++++|++|+.|++|++||+++......   ..+|..+|.+++|+|+ +..+++|+.|+.++
T Consensus         3 ~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~   82 (342)
T d1yfqa_           3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEIL   82 (342)
T ss_dssp             EEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEE
T ss_pred             eEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEccccccee
Confidence            34456689999999999  889999999999999999987644322   2369999999999986 56899999999999


Q ss_pred             EEeCcCCeeeEEeecccccE-EEEEE--cCCeEEEeecCCcEEEEECCccccee
Q psy16373        110 VWDTVTGACMYSIQAHDGCI-HALTY--SDSYVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus       110 ~~d~~~~~~~~~~~~~~~~v-~~i~~--~~~~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      +|++...........+.... ....+  ....+++++.|+.+++||++++....
T Consensus        83 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~  136 (342)
T d1yfqa_          83 KVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGV  136 (342)
T ss_dssp             EECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBC
T ss_pred             eeecccccccccccccccccccccccccccccccccccccccceeeccccccce
Confidence            99998887666655444332 22222  33799999999999999997765443

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.72  E-value=1.5e-16  Score=108.76  Aligned_cols=147  Identities=12%  Similarity=0.038  Sum_probs=114.7

Q ss_pred             ccc-ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCC--eEEEEEcccccce
Q psy16373          3 KSV-HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDH--TLKVYKLEDQQLL   77 (166)
Q Consensus         3 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~--~v~v~~~~~~~~~   77 (166)
                      .|+ .+..+++++.+ .+.+|+......        .. .+|...|.+++|  +++.|++++.+.  .|++||.++++..
T Consensus        10 fSP~dG~~~a~~~~g-~v~v~d~~~~~~--------~~-~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~   79 (360)
T d1k32a3          10 FSPLDGDLIAFVSRG-QAFIQDVSGTYV--------LK-VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE   79 (360)
T ss_dssp             EEECGGGCEEEEETT-EEEEECTTSSBE--------EE-CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred             ccCCCCCEEEEEECC-eEEEEECCCCcE--------EE-ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEE
Confidence            355 56777887765 566666543321        11 268889999999  888888776553  7899999877654


Q ss_pred             ehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEe----------ecC
Q psy16373         78 FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISL----------GQD  145 (166)
Q Consensus        78 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~----------~~d  145 (166)
                       .+..|...+.+++|+|+++++++++.++.+++|++.+++....+..|...+.+++|+|+  +|+.+          ..+
T Consensus        80 -~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~  158 (360)
T d1k32a3          80 -KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVM  158 (360)
T ss_dssp             -ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCE
T ss_pred             -EeeCCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeeccc
Confidence             56679999999999999999999999999999999999998888888889999999983  56543          334


Q ss_pred             CcEEEEECCccccee
Q psy16373        146 ERLCVWDRFQGHLLS  160 (166)
Q Consensus       146 ~~i~~wd~~~~~~~~  160 (166)
                      +.+++||+.+++...
T Consensus       159 ~~~~v~d~~~~~~~~  173 (360)
T d1k32a3         159 QAIHVYDMEGRKIFA  173 (360)
T ss_dssp             EEEEEEETTTTEEEE
T ss_pred             cceeeeccccCceee
Confidence            579999998876543

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.65  E-value=1.1e-14  Score=102.86  Aligned_cols=147  Identities=7%  Similarity=-0.031  Sum_probs=111.0

Q ss_pred             ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccce--ehh-
Q psy16373          6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL--FTL-   80 (166)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~--~~~-   80 (166)
                      ...++++.+.++.+.+|+....+       .+..++.+ ..+..++|  +|+++++++.|+.+++||+.+++..  .++ 
T Consensus        31 ~~~~~v~~~d~g~v~v~D~~t~~-------v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~  102 (432)
T d1qksa2          31 ENLFSVTLRDAGQIALIDGSTYE-------IKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK  102 (432)
T ss_dssp             GGEEEEEETTTTEEEEEETTTCC-------EEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred             CcEEEEEEcCCCEEEEEECCCCc-------EEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEe
Confidence            45678999999999999976544       33345544 35889999  8999999999999999999877532  222 


Q ss_pred             --cCCCCceEEEEEcCCCCEE-EEecCCCcEEEEeCcCCeeeEEeecc-----------cccEEEEEEcCC---eEEEee
Q psy16373         81 --HGHCGPITTLFIDGVSMMS-GSGSQDGLLCVWDTVTGACMYSIQAH-----------DGCIHALTYSDS---YVISLG  143 (166)
Q Consensus        81 --~~~~~~v~~~~~~~~~~~~-~~~~~d~~v~~~d~~~~~~~~~~~~~-----------~~~v~~i~~~~~---~l~~~~  143 (166)
                        ..|.+.+.+..|+|+|+++ +++..++.+++||..+++++..+..+           ......+.++++   ++++..
T Consensus       103 ~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~  182 (432)
T d1qksa2         103 IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK  182 (432)
T ss_dssp             CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred             cCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEc
Confidence              3455556667778899875 77888999999999999988877543           234556788873   456667


Q ss_pred             cCCcEEEEECCccccee
Q psy16373        144 QDERLCVWDRFQGHLLS  160 (166)
Q Consensus       144 ~d~~i~~wd~~~~~~~~  160 (166)
                      .++.|.+||..+++...
T Consensus       183 ~~~~i~~~d~~~~~~~~  199 (432)
T d1qksa2         183 ETGKILLVDYTDLNNLK  199 (432)
T ss_dssp             TTTEEEEEETTCSSEEE
T ss_pred             cCCeEEEEEccCCCcce
Confidence            78999999998876543

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.62  E-value=2.9e-15  Score=105.46  Aligned_cols=107  Identities=6%  Similarity=-0.061  Sum_probs=86.7

Q ss_pred             EEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE--ee---cccccEE
Q psy16373         56 RVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS--IQ---AHDGCIH  130 (166)
Q Consensus        56 ~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~--~~---~~~~~v~  130 (166)
                      ++++.+.|+.|++||+.+++.+.++..+. .+..++|+|+|+++++++.|+.+++||+.+++....  +.   +|...+.
T Consensus        34 ~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~  112 (426)
T d1hzua2          34 FSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVES  112 (426)
T ss_dssp             EEEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEE
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEE
Confidence            45778889999999999999999998764 589999999999999999999999999998865433  32   4555666


Q ss_pred             EEEEcC--CeE-EEeecCCcEEEEECCcccceeeee
Q psy16373        131 ALTYSD--SYV-ISLGQDERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       131 ~i~~~~--~~l-~~~~~d~~i~~wd~~~~~~~~~~~  163 (166)
                      +++|+|  .++ +++..++.+.+||..+++.+..+.
T Consensus       113 s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~  148 (426)
T d1hzua2         113 SKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS  148 (426)
T ss_dssp             CCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred             eeeecCCCCEEEEeecCCCeEEEEcCCccceeEEee
Confidence            777777  354 555579999999999988876654

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.61  E-value=2.2e-14  Score=97.77  Aligned_cols=143  Identities=11%  Similarity=0.032  Sum_probs=112.4

Q ss_pred             ceEEEEe-cCCC-ceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373          6 HRIHLRT-GSAG-SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH   81 (166)
Q Consensus         6 ~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~   81 (166)
                      .+..+++ +..+ ..+.+|+....+        ...+..|...+.+++|  ++++|++++.++.+++|+..+++....+.
T Consensus        53 Dg~~l~~~~~~~g~~v~v~d~~~~~--------~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~  124 (360)
T d1k32a3          53 DTKVAFIHGTREGDFLGIYDYRTGK--------AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER  124 (360)
T ss_dssp             SSEEEEEEEETTEEEEEEEETTTCC--------EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             CCCEEEEEEcCCCCEEEEEECCCCc--------EEEeeCCCceEEeeeecccccccceeccccccccccccccceeeeee
Confidence            3444443 3333 467888875432        2245678899999999  88999999999999999999998888888


Q ss_pred             CCCCceEEEEEcCCCCEEEEe----------cCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEE
Q psy16373         82 GHCGPITTLFIDGVSMMSGSG----------SQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLC  149 (166)
Q Consensus        82 ~~~~~v~~~~~~~~~~~~~~~----------~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~  149 (166)
                      .|...+.+++|+|++++++.+          ..++.+++||+++++..... .+...+..++|+|  ..|++++.++.+.
T Consensus       125 ~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~s~~~~~~  203 (360)
T d1k32a3         125 SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT-TENSHDYAPAFDADSKNLYYLSYRSLDP  203 (360)
T ss_dssp             CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS-CSSSBEEEEEECTTSCEEEEEESCCCCC
T ss_pred             cccccccchhhccceeeeeeeccccccceeeccccceeeeccccCceeeec-ccccccccccccCCCCEEEEEeCCCceE
Confidence            898999999999999999854          34557999999888765443 4567788899998  4899999999999


Q ss_pred             EEECCccc
Q psy16373        150 VWDRFQGH  157 (166)
Q Consensus       150 ~wd~~~~~  157 (166)
                      +||.....
T Consensus       204 ~~d~~~~~  211 (360)
T d1k32a3         204 SPDRVVLN  211 (360)
T ss_dssp             EECSSSSC
T ss_pred             cccccccc
Confidence            99976543

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.59  E-value=6.1e-15  Score=104.16  Aligned_cols=108  Identities=7%  Similarity=-0.092  Sum_probs=88.2

Q ss_pred             EEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee--eEEee---cccccEE
Q psy16373         56 RVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC--MYSIQ---AHDGCIH  130 (166)
Q Consensus        56 ~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~--~~~~~---~~~~~v~  130 (166)
                      ++++.+.+++|.+||..+++.+..+..+ ..+..++|+|+|+++++++.|+.+.+||+.+++.  ...+.   .|.+.+.
T Consensus        34 ~~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~  112 (432)
T d1qksa2          34 FSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIET  112 (432)
T ss_dssp             EEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEE
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEE
Confidence            3588899999999999999999999876 4689999999999999999999999999987753  33333   3455566


Q ss_pred             EEEEcCC--e-EEEeecCCcEEEEECCcccceeeeee
Q psy16373        131 ALTYSDS--Y-VISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       131 ~i~~~~~--~-l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      +..|+|+  + ++++..++.|++||..+++++..+..
T Consensus       113 s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~  149 (432)
T d1qksa2         113 SKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST  149 (432)
T ss_dssp             CCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred             ecccCCCCCEEEEEcCCCCeEEEEeCccccceeeecc
Confidence            6677773  4 47788899999999999998877653

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.59  E-value=2.6e-14  Score=100.51  Aligned_cols=117  Identities=6%  Similarity=-0.041  Sum_probs=89.4

Q ss_pred             cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccccee--hh
Q psy16373          5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF--TL   80 (166)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~--~~   80 (166)
                      .+..++++.+.++.+.+|+....+       .+.+++.+. .+..++|  +|+++++++.|+.+++||+.+++...  ++
T Consensus        30 ~~~~~~V~~~~dg~v~vwD~~t~~-------~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i  101 (426)
T d1hzua2          30 LPNLFSVTLRDAGQIALVDGDSKK-------IVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI  101 (426)
T ss_dssp             GGGEEEEEETTTTEEEEEETTTCS-------EEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred             CCeEEEEEEcCCCEEEEEECCCCc-------EEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEE
Confidence            456678999999999999986543       334555553 5788999  89999999999999999999886432  22


Q ss_pred             ---cCCCCceEEEEEcCCCCEEE-EecCCCcEEEEeCcCCeeeEEeecccccE
Q psy16373         81 ---HGHCGPITTLFIDGVSMMSG-SGSQDGLLCVWDTVTGACMYSIQAHDGCI  129 (166)
Q Consensus        81 ---~~~~~~v~~~~~~~~~~~~~-~~~~d~~v~~~d~~~~~~~~~~~~~~~~v  129 (166)
                         .+|...+.+++|+|+|++++ ++..++.+.+||..+++++..+..+...+
T Consensus       102 ~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~  154 (426)
T d1hzua2         102 KIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTV  154 (426)
T ss_dssp             ECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECS
T ss_pred             eCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCc
Confidence               24555667778889999865 45578999999999998888776654433

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.51  E-value=8.5e-12  Score=82.76  Aligned_cols=148  Identities=8%  Similarity=0.091  Sum_probs=111.5

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEE-EEEecCCeEEEEEcccccceehhcCC
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRV-ITGSQDHTLKVYKLEDQQLLFTLHGH   83 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l-~~~~~d~~v~v~~~~~~~~~~~~~~~   83 (166)
                      .+.+++++.++.+.+|+....+       .+.+++. ......+++  ++++| ++++.++.|.+||+.+++.+..+..+
T Consensus         2 ~~~yV~~~~~~~v~v~D~~t~~-------~~~~i~~-g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~   73 (301)
T d1l0qa2           2 TFAYIANSESDNISVIDVTSNK-------VTATIPV-GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG   73 (301)
T ss_dssp             EEEEEEETTTTEEEEEETTTTE-------EEEEEEC-SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred             eEEEEEECCCCEEEEEECCCCe-------EEEEEEC-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecc
Confidence            3667888899999999876543       2223332 234577888  77776 46678899999999999998888766


Q ss_pred             CCceEEEEEcCCCCEE-EEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC---eEEEeecCCcEEEEECCcccce
Q psy16373         84 CGPITTLFIDGVSMMS-GSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS---YVISLGQDERLCVWDRFQGHLL  159 (166)
Q Consensus        84 ~~~v~~~~~~~~~~~~-~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~---~l~~~~~d~~i~~wd~~~~~~~  159 (166)
                      . .+..+.+++++..+ +++..++.+.+|+..+++....+..+ .....+.|+|+   .++++..++.+.+|+..+++.+
T Consensus        74 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~  151 (301)
T d1l0qa2          74 S-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI  151 (301)
T ss_dssp             S-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred             c-cccccccccccccccccccccceeeecccccceeeeecccc-ccceEEEeecCCCeeeeeeccccceeeeecccccee
Confidence            5 46889999997755 45667789999999999888888754 45677889883   4456667888999999998877


Q ss_pred             eeeee
Q psy16373        160 STIQL  164 (166)
Q Consensus       160 ~~~~~  164 (166)
                      ..+..
T Consensus       152 ~~~~~  156 (301)
T d1l0qa2         152 NTVSV  156 (301)
T ss_dssp             EEEEC
T ss_pred             eeccc
Confidence            76553

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.50  E-value=1.4e-12  Score=87.76  Aligned_cols=147  Identities=13%  Similarity=0.014  Sum_probs=109.8

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeee--ccCCceEEEEe--cCcEE-EEEecCCeEEEEEcccccceehhcC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR--AHHQPITVLEC--VSNRV-ITGSQDHTLKVYKLEDQQLLFTLHG   82 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~--~~~~l-~~~~~d~~v~v~~~~~~~~~~~~~~   82 (166)
                      .++++++.++.+.+|+....+       .+.+++  .+...+.++++  +++++ ++++.++.|.+||+.+++.+..+..
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~-------~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~   74 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMA-------VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDL   74 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTE-------EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEEC
T ss_pred             eEEEEEcCCCEEEEEECCCCe-------EEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEec
Confidence            468888899999999986543       222333  33445677888  77776 5667899999999999988877765


Q ss_pred             CCC-----ceEEEEEcCCCCEEEEec------------CCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEee
Q psy16373         83 HCG-----PITTLFIDGVSMMSGSGS------------QDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLG  143 (166)
Q Consensus        83 ~~~-----~v~~~~~~~~~~~~~~~~------------~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~  143 (166)
                      +..     .+..++++|++..++.+.            .+..+.+||..+++....+.. ...+..++|+++  ++++++
T Consensus        75 ~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~  153 (337)
T d1pbyb_          75 STPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLG  153 (337)
T ss_dssp             CBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEES
T ss_pred             CCCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccc-cCCceEEEEcCCCCEEEEEc
Confidence            433     345789999999887765            357889999999998888775 455778899983  777765


Q ss_pred             cCCcEEEEECCcccceeeeee
Q psy16373        144 QDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       144 ~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .  .+.+||..+++....+..
T Consensus       154 ~--~~~~~d~~~~~~~~~~~~  172 (337)
T d1pbyb_         154 R--DLHVMDPEAGTLVEDKPI  172 (337)
T ss_dssp             S--SEEEEETTTTEEEEEECS
T ss_pred             C--CcceeeeecCcEEEEeec
Confidence            4  478899999888776654

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.50  E-value=2e-12  Score=87.27  Aligned_cols=60  Identities=15%  Similarity=0.160  Sum_probs=48.6

Q ss_pred             CcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeeecC
Q psy16373        106 GLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQLQG  166 (166)
Q Consensus       106 ~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~  166 (166)
                      +.+.+||..+++.+..+. +...+.+++|+|  .++++++.|+.|++||.++++.+.++++++
T Consensus       272 ~~v~v~d~~~~~~~~~~~-~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p~  333 (346)
T d1jmxb_         272 NRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPG  333 (346)
T ss_dssp             SEEEEEETTTTEEEEEEE-CSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSS
T ss_pred             CeEEEEECCCCcEEEEEc-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEEECCC
Confidence            456777777777666654 345688999999  489999999999999999999999998763

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.45  E-value=3.4e-11  Score=79.75  Aligned_cols=147  Identities=10%  Similarity=0.046  Sum_probs=102.9

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecC-CeEEEEEcccccceehhcCCC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQD-HTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d-~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      ..++++..+..+.+|+.....       ....+. +.....++.+  ++..+++++.+ +.+.+|+....+....+. ..
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  199 (301)
T d1l0qa2         129 KLYVTNNGDKTVSVINTVTKA-------VINTVS-VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VE  199 (301)
T ss_dssp             EEEEEETTTTEEEEEETTTTE-------EEEEEE-CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CS
T ss_pred             eeeeeeccccceeeeeccccc-------eeeecc-cCCCceEEEeeccccceeeecccccccccccccceeeeeccc-cc
Confidence            445566666666666654332       112222 2334667777  66676666654 677778877666655554 34


Q ss_pred             CceEEEEEcCCCCEEEEec---CCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eE-EEeecCCcEEEEECCcccc
Q psy16373         85 GPITTLFIDGVSMMSGSGS---QDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YV-ISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~~~---~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l-~~~~~d~~i~~wd~~~~~~  158 (166)
                      ..+..+++++++..++.+.   .++.+.+||+.+++.+..+.. ...+..++|+|+  ++ ++++.|+.|++||+++++.
T Consensus       200 ~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~-~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~  278 (301)
T d1l0qa2         200 AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV-GPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTI  278 (301)
T ss_dssp             SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred             CCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcC-CCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Confidence            5578899999988776553   346899999999998888765 345789999993  55 5677799999999999999


Q ss_pred             eeeeee
Q psy16373        159 LSTIQL  164 (166)
Q Consensus       159 ~~~~~~  164 (166)
                      +.++++
T Consensus       279 ~~~~~v  284 (301)
T d1l0qa2         279 TATMAV  284 (301)
T ss_dssp             EEEEEC
T ss_pred             EEEEeC
Confidence            998875

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.43  E-value=1.7e-12  Score=87.44  Aligned_cols=110  Identities=12%  Similarity=0.073  Sum_probs=88.1

Q ss_pred             cEEEEEecCCeEEEEEcccccceehhcC--CCCceEEEEEcCCCCEE-EEecCCCcEEEEeCcCCeeeEEeecccc----
Q psy16373         55 NRVITGSQDHTLKVYKLEDQQLLFTLHG--HCGPITTLFIDGVSMMS-GSGSQDGLLCVWDTVTGACMYSIQAHDG----  127 (166)
Q Consensus        55 ~~l~~~~~d~~v~v~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~-~~~~~d~~v~~~d~~~~~~~~~~~~~~~----  127 (166)
                      +++++++.|++|.+||+++++.+..+..  +...+.+++++|+|+++ ++++.++.|.+||+++++.+..+..+..    
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~   81 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence            5799999999999999999998887764  34557899999999876 5677899999999999999888765533    


Q ss_pred             -cEEEEEEcC--CeEEEee------------cCCcEEEEECCcccceeeeee
Q psy16373        128 -CIHALTYSD--SYVISLG------------QDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       128 -~v~~i~~~~--~~l~~~~------------~d~~i~~wd~~~~~~~~~~~~  164 (166)
                       .+..++|+|  +.++++.            .+..+.+||..+++.+..+..
T Consensus        82 ~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  133 (337)
T d1pbyb_          82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA  133 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC
T ss_pred             cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccc
Confidence             344688888  3565554            367889999999888776654

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.42  E-value=1e-11  Score=83.54  Aligned_cols=151  Identities=12%  Similarity=0.130  Sum_probs=105.9

Q ss_pred             ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEe-cCCeEEEEEcccccceehh
Q psy16373          4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGS-QDHTLKVYKLEDQQLLFTL   80 (166)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~-~d~~v~v~~~~~~~~~~~~   80 (166)
                      +++.+.+++++.++.|++|+.+.....     .......|.+.+..++|  ++++|++++ .|+.|.+|++........+
T Consensus         1 ~~~~~v~v~~~~~~~I~v~~~~~~~~l-----~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~   75 (333)
T d1ri6a_           1 SLKQTVYIASPESQQIHVWNLNHEGAL-----TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTF   75 (333)
T ss_dssp             CCEEEEEEEEGGGTEEEEEEECTTSCE-----EEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred             CCceEEEEECCCCCcEEEEEEcCCCCe-----EEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEE
Confidence            467888999999999999998654321     11122356788899999  888886555 5899999999865433322


Q ss_pred             c---CCCCceEEEEEcCCCCEEEEecC-CCcEEEEeCcCCeeeEE--eecccccEEEEEEcC--CeEEEee-cCCcEEEE
Q psy16373         81 H---GHCGPITTLFIDGVSMMSGSGSQ-DGLLCVWDTVTGACMYS--IQAHDGCIHALTYSD--SYVISLG-QDERLCVW  151 (166)
Q Consensus        81 ~---~~~~~v~~~~~~~~~~~~~~~~~-d~~v~~~d~~~~~~~~~--~~~~~~~v~~i~~~~--~~l~~~~-~d~~i~~w  151 (166)
                      .   .+...+..++++|+++++++++. ++.+.+|+.........  ...+...+.++.++|  ..++.++ .+..|.+|
T Consensus        76 ~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~  155 (333)
T d1ri6a_          76 AAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLF  155 (333)
T ss_dssp             EEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEE
T ss_pred             eeecccCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEE
Confidence            2   23455678999999998888775 66899998876654433  334556677888988  3555555 45679999


Q ss_pred             ECCcccce
Q psy16373        152 DRFQGHLL  159 (166)
Q Consensus       152 d~~~~~~~  159 (166)
                      +..+....
T Consensus       156 ~~~~~~~~  163 (333)
T d1ri6a_         156 TVSDDGHL  163 (333)
T ss_dssp             EECTTSCE
T ss_pred             EeccCCcc
Confidence            98765443

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.39  E-value=4.1e-12  Score=85.73  Aligned_cols=110  Identities=12%  Similarity=0.021  Sum_probs=87.0

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhc-CCCCceEEEEEcCCCCEE-EEecCCCcEEEEeCcCCeeeEEeeccc----
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLH-GHCGPITTLFIDGVSMMS-GSGSQDGLLCVWDTVTGACMYSIQAHD----  126 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~~~~~d~~v~~~d~~~~~~~~~~~~~~----  126 (166)
                      +++++++++.++.|.+||+.+++.+.++. .+...+.+++++|+++++ +++..++.|.+||+.+++.+..+....    
T Consensus         7 ~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~   86 (346)
T d1jmxb_           7 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGE   86 (346)
T ss_dssp             TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTE
T ss_pred             CCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccccccc
Confidence            67899999999999999999999988876 456678899999999876 566788999999999999887765322    


Q ss_pred             --ccEEEEEEcCC--eEEEee------------cCCcEEEEECCcccceeee
Q psy16373        127 --GCIHALTYSDS--YVISLG------------QDERLCVWDRFQGHLLSTI  162 (166)
Q Consensus       127 --~~v~~i~~~~~--~l~~~~------------~d~~i~~wd~~~~~~~~~~  162 (166)
                        ..+..++|+|+  ++++++            .+..+.+||..+++....+
T Consensus        87 ~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  138 (346)
T d1jmxb_          87 VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPV  138 (346)
T ss_dssp             EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCS
T ss_pred             cCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEE
Confidence              23456888883  555554            4678999999887765443

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.19  E-value=1.9e-10  Score=77.20  Aligned_cols=106  Identities=9%  Similarity=0.091  Sum_probs=75.5

Q ss_pred             EEEEEecCCeEEEEEcccccceehh--cCCCCceEEEEEcCCCCEEE-EecCCCcEEEEeCcCCeeeEEe---ecccccE
Q psy16373         56 RVITGSQDHTLKVYKLEDQQLLFTL--HGHCGPITTLFIDGVSMMSG-SGSQDGLLCVWDTVTGACMYSI---QAHDGCI  129 (166)
Q Consensus        56 ~l~~~~~d~~v~v~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~-~~~~d~~v~~~d~~~~~~~~~~---~~~~~~v  129 (166)
                      .+++++.|++|++|++.+...+..+  ..|.+.+..++|+|+|++|+ ++..|+.|.+|++........+   ..+...+
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p   85 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL   85 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCc
Confidence            3577789999999999765433322  25778899999999999885 4556899999998765433222   2234456


Q ss_pred             EEEEEcCC--eEEEeec-CCcEEEEECCcccceee
Q psy16373        130 HALTYSDS--YVISLGQ-DERLCVWDRFQGHLLST  161 (166)
Q Consensus       130 ~~i~~~~~--~l~~~~~-d~~i~~wd~~~~~~~~~  161 (166)
                      ..++|+|+  ++++++. ++.+.+|+.........
T Consensus        86 ~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~  120 (333)
T d1ri6a_          86 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGV  120 (333)
T ss_dssp             SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEE
T ss_pred             eEEEEcCCCCEEeecccCCCceeeeccccccceec
Confidence            67999984  7777775 67889998766554433

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.15  E-value=6.2e-09  Score=70.96  Aligned_cols=155  Identities=10%  Similarity=-0.068  Sum_probs=95.4

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEccccccee--hhcCCC
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLF--TLHGHC   84 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~--~~~~~~   84 (166)
                      ..+++.+.++.+.+|+........... ......+.........+ .+..++..+.++.+.+|+..+.....  ....+.
T Consensus       178 ~~~v~~~~dg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~  256 (373)
T d2madh_         178 STFYLLCAQGGLAKTDHAGGAAGAGLV-GAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALS  256 (373)
T ss_pred             cEEEEEcCCCeEEEEEcCCceeeEEEe-eeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEEEEEeecccc
Confidence            355677777777777654433211110 00001112222333444 44456666788999999987654321  111111


Q ss_pred             ----------CceEEEEEcCCCC----------EEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC----eEE
Q psy16373         85 ----------GPITTLFIDGVSM----------MSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS----YVI  140 (166)
Q Consensus        85 ----------~~v~~~~~~~~~~----------~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~----~l~  140 (166)
                                .....+++++++.          .+++...++.+.+||..+++.+..+. +...+..++|+|+    +++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~-~~~~~~~~a~spDG~~~l~v  335 (373)
T d2madh_         257 GGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYA  335 (373)
T ss_pred             CcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEec-CCCCeeEEEECCCCCEEEEE
Confidence                      1123344444443          34455667789999999999888776 5667889999984    346


Q ss_pred             EeecCCcEEEEECCcccceeeeee
Q psy16373        141 SLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       141 ~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      +++.|+.|++||+.+++.+.++..
T Consensus       336 t~~~d~~v~v~D~~tg~~~~~~~~  359 (373)
T d2madh_         336 LSAGTEVLHIYDAGAGDQDQSTVE  359 (373)
T ss_pred             EeCCCCeEEEEECCCCCEEEEECC
Confidence            788899999999999999998864

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.10  E-value=4.7e-10  Score=76.02  Aligned_cols=118  Identities=14%  Similarity=0.095  Sum_probs=84.5

Q ss_pred             ceEEEEe--cCcEEEEEecCCeEEEEEccccccee--hhcCC----------CCceEEEEEcCCCCEEEEecCC------
Q psy16373         46 PITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF--TLHGH----------CGPITTLFIDGVSMMSGSGSQD------  105 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~--~~~~~----------~~~v~~~~~~~~~~~~~~~~~d------  105 (166)
                      .+....+  .+..++.++.++.+.+|++..++...  ....+          ......+++++++..++....+      
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~  275 (355)
T d2bbkh_         196 LINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRH  275 (355)
T ss_dssp             BCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCT
T ss_pred             eeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceee
Confidence            3444445  67788888999999999998764321  11111          1123457888888777654332      


Q ss_pred             ----CcEEEEeCcCCeeeEEeecccccEEEEEEcCC----eEEEeecCCcEEEEECCcccceeeeee
Q psy16373        106 ----GLLCVWDTVTGACMYSIQAHDGCIHALTYSDS----YVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       106 ----~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~----~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                          ..+.+||..+++.+..+.. ...+.+++|+|+    .++++..|+.|++||+++++.+.++..
T Consensus       276 ~~~~~~v~v~d~~t~~~~~~~~~-~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~  341 (355)
T d2bbkh_         276 KTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ  341 (355)
T ss_dssp             TSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred             cCCCCeEEEEeCCCCcEEEEecC-CCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeC
Confidence                3699999999998888764 456789999984    345667799999999999999998864

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=98.94  E-value=2.2e-08  Score=68.15  Aligned_cols=118  Identities=13%  Similarity=-0.028  Sum_probs=83.5

Q ss_pred             ccCCceEEEEe--cCcEEEEE-----ecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec----------C
Q psy16373         42 AHHQPITVLEC--VSNRVITG-----SQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS----------Q  104 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~~-----~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~  104 (166)
                      .+..++.++++  ++..++..     +..+.|.+||..+++.+.++..+..+  .++|+|+|+++++++          .
T Consensus        18 ~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~   95 (373)
T d2madh_          18 AADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKR   95 (373)
T ss_pred             cCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCccccccc
Confidence            46677888888  77777654     23467999999999999887765543  789999999998864          4


Q ss_pred             CCcEEEEeCcCCeeeEEeecccccEEE-------EEEcC--CeE--EEeecCCcEEEEECCcccceee
Q psy16373        105 DGLLCVWDTVTGACMYSIQAHDGCIHA-------LTYSD--SYV--ISLGQDERLCVWDRFQGHLLST  161 (166)
Q Consensus       105 d~~v~~~d~~~~~~~~~~~~~~~~v~~-------i~~~~--~~l--~~~~~d~~i~~wd~~~~~~~~~  161 (166)
                      ++.+.+||..+++.+..+..+......       +.|++  ..+  .....++.+.+|+....+....
T Consensus        96 ~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~  163 (373)
T d2madh_          96 TDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQL  163 (373)
T ss_pred             ceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEE
Confidence            578999999999998888766554433       45554  222  2233456677787766655443

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.86  E-value=7.7e-09  Score=70.74  Aligned_cols=58  Identities=14%  Similarity=0.059  Sum_probs=46.2

Q ss_pred             cEEEEeCcCCeeeEEeecccccEEEEEEcCC---e-EEEeecCCcEEEEECCcccceeeeeec
Q psy16373        107 LLCVWDTVTGACMYSIQAHDGCIHALTYSDS---Y-VISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       107 ~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~---~-l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      .+.+||..+++.+..+.. ...+..++|+|+   . +++...|+.|++||..+++.+.++++.
T Consensus       295 ~v~v~D~~t~~~~~~~~~-~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g  356 (368)
T d1mdah_         295 NTSSVTASVGQTSGPISN-GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD  356 (368)
T ss_dssp             EEEEEESSSCCEEECCEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC
T ss_pred             eEEEEECCCCcEeEEecC-CCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECC
Confidence            477889988888877653 457788999983   3 456667899999999999999988764

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.81  E-value=1e-07  Score=64.26  Aligned_cols=125  Identities=10%  Similarity=0.034  Sum_probs=78.4

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeee---e--eccCCceEEEEe--cCcEEEEEecC----------CeEEEEE
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVES---T--RAHHQPITVLEC--VSNRVITGSQD----------HTLKVYK   70 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~i~~~~~--~~~~l~~~~~d----------~~v~v~~   70 (166)
                      ..++.++.++.+.+|+................   .  .........+++  ++..++....+          ..|.+||
T Consensus       207 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d  286 (355)
T d2bbkh_         207 GRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLD  286 (355)
T ss_dssp             TEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred             CeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEe
Confidence            34566677778888876544321111100000   0  000111122344  66666655433          4799999


Q ss_pred             cccccceehhcCCCCceEEEEEcCCCC--EEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEE
Q psy16373         71 LEDQQLLFTLHGHCGPITTLFIDGVSM--MSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALT  133 (166)
Q Consensus        71 ~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~  133 (166)
                      ..+++.+..+. +...+.+++|+|+++  +++++..|+.|.+||+++++.+.++..+...-..+.
T Consensus       287 ~~t~~~~~~~~-~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~  350 (355)
T d2bbkh_         287 AKTGERLAKFE-MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVIT  350 (355)
T ss_dssp             TTTCCEEEEEE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEE
T ss_pred             CCCCcEEEEec-CCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCCccEEE
Confidence            99998887766 345578999999987  466778899999999999999999876544333343

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.80  E-value=2.6e-08  Score=70.22  Aligned_cols=108  Identities=10%  Similarity=-0.016  Sum_probs=82.6

Q ss_pred             EEEe--cCcEEEEEecCCeEEEEEccccccee-----hhcCCCCceEEEEEcCCCCEEEEecC---------CCcEEEEe
Q psy16373         49 VLEC--VSNRVITGSQDHTLKVYKLEDQQLLF-----TLHGHCGPITTLFIDGVSMMSGSGSQ---------DGLLCVWD  112 (166)
Q Consensus        49 ~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~~~~~---------d~~v~~~d  112 (166)
                      .+.|  +++++.  ..++.+.+||+.+++...     .+..|...|.++.|+|++++++.++.         ++.+.+||
T Consensus        21 ~~~W~~d~~~~~--~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d   98 (470)
T d2bgra1          21 SLRWISDHEYLY--KQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD   98 (470)
T ss_dssp             CCEECSSSEEEE--ESSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             CCEeCCCCEEEE--EcCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEE
Confidence            4566  455554  357889999999987643     34456678999999999999987743         56789999


Q ss_pred             CcCCeeeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCccccee
Q psy16373        113 TVTGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus       113 ~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      +.+++. ..+..+...+..+.|+|+  .++.. .++.+.+|+..+++..+
T Consensus        99 ~~~~~~-~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~  146 (470)
T d2bgra1          99 LNKRQL-ITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYR  146 (470)
T ss_dssp             TTTTEE-CCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEE
T ss_pred             CCCCcc-cccccCCccccccccccCcceeeEe-ecccceEEECCCCceee
Confidence            998874 456778888999999994  66664 57789999998887654

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.70  E-value=3.7e-07  Score=62.18  Aligned_cols=145  Identities=4%  Similarity=-0.211  Sum_probs=91.6

Q ss_pred             EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEe----------cCCeEEEEEcccccce
Q psy16373          8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGS----------QDHTLKVYKLEDQQLL   77 (166)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~----------~d~~v~v~~~~~~~~~   77 (166)
                      +..+....++...+|......     ...+..+..+..+...+..++..|+..+          .|+.|.+||..+++.+
T Consensus        35 ~v~~~~~~~g~~~~~~~d~~~-----~~~~~~~~~~~~~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~  109 (368)
T d1mdah_          35 HITLPAYFAGTTENWVSCAGC-----GVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI  109 (368)
T ss_dssp             EEEECTTTCSSEEEEEEETTT-----TEEEEEEEECTTCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred             eEEeeccCCCcceEEEEeCCC-----CcEEEEEeCCCCCcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEe
Confidence            344445555555555443222     1222334444444333333788777654          4788999999999887


Q ss_pred             ehhcCCCC-------ceEEEEEcCCCCEEEEec-CCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEE
Q psy16373         78 FTLHGHCG-------PITTLFIDGVSMMSGSGS-QDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLC  149 (166)
Q Consensus        78 ~~~~~~~~-------~v~~~~~~~~~~~~~~~~-~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~  149 (166)
                      ..+..+..       ....++|+|++++++.+. .++.+.+||+.+++....+..+..... ....+..++..+.|+.+.
T Consensus       110 ~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~Dg~~~  188 (368)
T d1mdah_         110 ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI-HPGAAATHYLGSCPASLA  188 (368)
T ss_dssp             EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC-EEEETTEEECCCCTTSCE
T ss_pred             eeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceE-ccCCCceEEEEcCCCCEE
Confidence            76653322       234689999999888775 578999999999998888765543321 112235667777888888


Q ss_pred             EEECCcccc
Q psy16373        150 VWDRFQGHL  158 (166)
Q Consensus       150 ~wd~~~~~~  158 (166)
                      .++......
T Consensus       189 ~~~~~~~~~  197 (368)
T d1mdah_         189 ASDLAAAPA  197 (368)
T ss_dssp             EEECCSSCC
T ss_pred             EEEecCCce
Confidence            888765443

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.66  E-value=1.1e-07  Score=67.00  Aligned_cols=132  Identities=8%  Similarity=-0.034  Sum_probs=89.3

Q ss_pred             CceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEec---------CCeEEEEEcccccceehhcCCC
Q psy16373         16 GSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQ---------DHTLKVYKLEDQQLLFTLHGHC   84 (166)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~---------d~~v~v~~~~~~~~~~~~~~~~   84 (166)
                      ++.+.+|+.........  ....++..|...|.++.|  ++++|+.++.         ++.+.+||+++++. ..+..+.
T Consensus        35 ~~~~~~~~~~t~~~~~~--~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~-~~l~~~~  111 (470)
T d2bgra1          35 ENNILVFNAEYGNSSVF--LENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL-ITEERIP  111 (470)
T ss_dssp             SSCEEEEETTTCCEEEE--ECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE-CCSSCCC
T ss_pred             CCcEEEEECCCCCEEEE--EchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcc-cccccCC
Confidence            34456677655442211  112344566778999988  8898888753         56788999998764 5577788


Q ss_pred             CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc------------------cccEEEEEEcCC--eEEEeec
Q psy16373         85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH------------------DGCIHALTYSDS--YVISLGQ  144 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~------------------~~~v~~i~~~~~--~l~~~~~  144 (166)
                      ..+....|+|+|..++.. .++.+.+|+..+++.......+                  .+....+.|+|+  .|+....
T Consensus       112 ~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~  190 (470)
T d2bgra1         112 NNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQF  190 (470)
T ss_dssp             TTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEE
T ss_pred             ccccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEe
Confidence            899999999999999885 5778999999888665433211                  122345779984  6777665


Q ss_pred             CCc-EEEE
Q psy16373        145 DER-LCVW  151 (166)
Q Consensus       145 d~~-i~~w  151 (166)
                      |.. +..|
T Consensus       191 d~~~v~~~  198 (470)
T d2bgra1         191 NDTEVPLI  198 (470)
T ss_dssp             ECTTCCEE
T ss_pred             cCCcCceE
Confidence            432 4444

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.11  E-value=0.00031  Score=45.69  Aligned_cols=115  Identities=16%  Similarity=0.165  Sum_probs=82.7

Q ss_pred             ccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc--CCCCceEEEEEcCCCCEEEEecC-CCcEEEEeCcCC
Q psy16373         42 AHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH--GHCGPITTLFIDGVSMMSGSGSQ-DGLLCVWDTVTG  116 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~-d~~v~~~d~~~~  116 (166)
                      .+......+++  +++.+++....+.|.+||.. ++.+..+-  +.......+++.++++.+++-.. ++.|.+++ .++
T Consensus       154 ~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~-G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~-~~G  231 (279)
T d1q7fa_         154 KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT-QDG  231 (279)
T ss_dssp             TTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC-TTS
T ss_pred             ccccccceeeeccceeEEeeeccccceeeeecC-CceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEEC-CCC
Confidence            34556777777  56677777788999999975 45554442  34456789999999998877544 45799998 467


Q ss_pred             eeeEEeecc--cccEEEEEEcCC-eEEEeecCCcEEEEECCcccc
Q psy16373        117 ACMYSIQAH--DGCIHALTYSDS-YVISLGQDERLCVWDRFQGHL  158 (166)
Q Consensus       117 ~~~~~~~~~--~~~v~~i~~~~~-~l~~~~~d~~i~~wd~~~~~~  158 (166)
                      +.+..+...  ......+++.++ .|+.++.++.|++|......+
T Consensus       232 ~~~~~~~~~~~~~~p~~vav~~dG~l~V~~~n~~v~~fr~~~~~~  276 (279)
T d1q7fa_         232 QLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQLAP  276 (279)
T ss_dssp             CEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSCCCC
T ss_pred             CEEEEEeCCCCCCCEeEEEEeCCCcEEEEeCCCeEEEEEeeeecC
Confidence            777766432  235678889884 777778899999998876554

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.09  E-value=2.7e-05  Score=54.31  Aligned_cols=109  Identities=10%  Similarity=-0.018  Sum_probs=74.6

Q ss_pred             EEEEecCCeEEEEEcccccceehhc------------------------------CCCCceEEEEEcCCCCEEEEe-cCC
Q psy16373         57 VITGSQDHTLKVYKLEDQQLLFTLH------------------------------GHCGPITTLFIDGVSMMSGSG-SQD  105 (166)
Q Consensus        57 l~~~~~d~~v~v~~~~~~~~~~~~~------------------------------~~~~~v~~~~~~~~~~~~~~~-~~d  105 (166)
                      +++++.+|.|++|++.+++.+.++.                              .|..........|+|+++... ..+
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            5677889999999998776655431                              133344555567888887554 577


Q ss_pred             CcEEEEeCcCCeeeEEee-cccccEEEEEEcCC----eEEEeecCC-----------------cEEEEECCcccceeeee
Q psy16373        106 GLLCVWDTVTGACMYSIQ-AHDGCIHALTYSDS----YVISLGQDE-----------------RLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       106 ~~v~~~d~~~~~~~~~~~-~~~~~v~~i~~~~~----~l~~~~~d~-----------------~i~~wd~~~~~~~~~~~  163 (166)
                      ..|.++|+++.+....+. ........++|+|+    +++..+.+.                 .+..+|..+.+...++.
T Consensus        94 ~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~  173 (441)
T d1qnia2          94 TRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVI  173 (441)
T ss_dssp             TEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEE
T ss_pred             CEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEEe
Confidence            899999999998877664 34567888999872    444333322                 23558888887777766


Q ss_pred             ec
Q psy16373        164 LQ  165 (166)
Q Consensus       164 ~~  165 (166)
                      ++
T Consensus       174 v~  175 (441)
T d1qnia2         174 VD  175 (441)
T ss_dssp             ES
T ss_pred             cC
Confidence            54

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=97.76  E-value=0.00091  Score=43.90  Aligned_cols=110  Identities=10%  Similarity=0.039  Sum_probs=76.5

Q ss_pred             ceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee-eEEe
Q psy16373         46 PITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC-MYSI  122 (166)
Q Consensus        46 ~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~-~~~~  122 (166)
                      .+..+++  +|+++++...+++|..++....  ...+......+.++++.++++++++...++.+..++...... ...+
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~--~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~  106 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL  106 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTCC--EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCCCC--EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeec
Confidence            4678888  8889888888999988886533  223344556789999999999999888888888887654321 1122


Q ss_pred             --ecccccEEEEEEcCC--eEEEeecCCcEEEEECCccc
Q psy16373        123 --QAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       123 --~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~  157 (166)
                        .......+.+++.++  ++++-+.++.+..+|...+.
T Consensus       107 ~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~  145 (302)
T d2p4oa1         107 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS  145 (302)
T ss_dssp             EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred             cccCCccccceeEEccCCCEEeeccccccceeeeccCCc
Confidence              123446788888873  45555567777777776553

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=97.66  E-value=0.0024  Score=42.20  Aligned_cols=68  Identities=6%  Similarity=0.065  Sum_probs=53.7

Q ss_pred             eEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCC-EEEEecCCCcEEEEeCc
Q psy16373         47 ITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSM-MSGSGSQDGLLCVWDTV  114 (166)
Q Consensus        47 i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~v~~~d~~  114 (166)
                      ...+++  ++++.++....+.|.+||.+.++....+.......++++|.|+++ ++++.+.++.|...++.
T Consensus       228 pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~  298 (314)
T d1pjxa_         228 ADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             EEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred             ceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence            456777  777777777789999999988877666666666789999999876 66777788888888864

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=97.64  E-value=0.0024  Score=44.34  Aligned_cols=136  Identities=12%  Similarity=0.082  Sum_probs=85.5

Q ss_pred             eEEEEecCCCceEEEeecccccceeeceeeeee-------------------------eeccCCceEEEEe--cCcEEEE
Q psy16373          7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVES-------------------------TRAHHQPITVLEC--VSNRVIT   59 (166)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~i~~~~~--~~~~l~~   59 (166)
                      -+.|++|+.++.+.++.........  ..++..                         -..|.........  +|++|+.
T Consensus        11 ~y~f~Sgg~sG~V~V~dlpS~r~l~--~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV   88 (441)
T d1qnia2          11 YYGFWSGGHQGEVRVLGVPSMRELM--RIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFI   88 (441)
T ss_dssp             EEEEEECBTTCCEEEEEETTTEEEE--EECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEE
T ss_pred             EEEEEeCCCCCcEEEEeCCCCcEEE--EEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEE
Confidence            5678999999999888875433211  101100                         1123333334333  7888765


Q ss_pred             E-ecCCeEEEEEcccccceehhc-CCCCceEEEEEcCCCC--EEEEecCCC-----------------cEEEEeCcCCee
Q psy16373         60 G-SQDHTLKVYKLEDQQLLFTLH-GHCGPITTLFIDGVSM--MSGSGSQDG-----------------LLCVWDTVTGAC  118 (166)
Q Consensus        60 ~-~~d~~v~v~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~--~~~~~~~d~-----------------~v~~~d~~~~~~  118 (166)
                      . ..+.+|.++|+++++....+. .....+..++++|+++  +++..+.+.                 .+..+|..+.+.
T Consensus        89 ~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v  168 (441)
T d1qnia2          89 NDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDV  168 (441)
T ss_dssp             EETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSE
T ss_pred             EcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCcccee
Confidence            5 578999999999988776554 3566789999999977  444444332                 234577777777


Q ss_pred             eEEeecccccEEEEEEcC--CeEEEeecC
Q psy16373        119 MYSIQAHDGCIHALTYSD--SYVISLGQD  145 (166)
Q Consensus       119 ~~~~~~~~~~v~~i~~~~--~~l~~~~~d  145 (166)
                      ...+... +....+.|+|  .++++.+.+
T Consensus       169 ~~qI~v~-~~p~~v~~spdGk~a~vt~~n  196 (441)
T d1qnia2         169 AWQVIVD-GNLDNTDADYTGKYATSTCYN  196 (441)
T ss_dssp             EEEEEES-SCCCCEEECSSSSEEEEEESC
T ss_pred             eEEEecC-CCccceEECCCCCEEEEEecC
Confidence            6666543 3456788888  366666654

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.58  E-value=0.0029  Score=40.45  Aligned_cols=108  Identities=6%  Similarity=-0.001  Sum_probs=69.7

Q ss_pred             eEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee-
Q psy16373         47 ITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ-  123 (166)
Q Consensus        47 i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~-  123 (166)
                      ..++++  +++.+++...++.+..++...................+++.++++++++....+.+..++...... ..+. 
T Consensus       142 p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~-~~~~~  220 (260)
T d1rwia_         142 PDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS-TVLPF  220 (260)
T ss_dssp             CCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCC-EECCC
T ss_pred             cceeeecCCCCEeeeccccccccccccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeE-EEEcc
Confidence            356777  667777777788899999875543332223445578999999999999888888888887654322 2221 


Q ss_pred             cccccEEEEEEcC-C-eEEEeecCCcEEEEECCc
Q psy16373        124 AHDGCIHALTYSD-S-YVISLGQDERLCVWDRFQ  155 (166)
Q Consensus       124 ~~~~~v~~i~~~~-~-~l~~~~~d~~i~~wd~~~  155 (166)
                      ..-.....|++++ + .+++-..++.|+..+...
T Consensus       221 ~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~~~~  254 (260)
T d1rwia_         221 TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE  254 (260)
T ss_dssp             CSCCCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred             CCCCCeEEEEEeCCCCEEEEECCCCEEEEEeCCC
Confidence            1223457888887 3 444434566676665543

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=97.55  E-value=0.0034  Score=41.43  Aligned_cols=99  Identities=10%  Similarity=0.108  Sum_probs=69.5

Q ss_pred             EEEEEecCCeEEEEEcccccce------ehhcC-CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeeccccc
Q psy16373         56 RVITGSQDHTLKVYKLEDQQLL------FTLHG-HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGC  128 (166)
Q Consensus        56 ~l~~~~~d~~v~v~~~~~~~~~------~~~~~-~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~  128 (166)
                      +.++-+..+.|..|++.....+      ..+.. .......+++.++|+.+++....+.|.+||.+.++.+..+......
T Consensus       190 lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~  269 (314)
T d1pjxa_         190 LIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEK  269 (314)
T ss_dssp             EEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSC
T ss_pred             EEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECCCCC
Confidence            3444456788888887543222      12222 1223568999999999988888899999998888777767665667


Q ss_pred             EEEEEEcCC---eEEEeecCCcEEEEECC
Q psy16373        129 IHALTYSDS---YVISLGQDERLCVWDRF  154 (166)
Q Consensus       129 v~~i~~~~~---~l~~~~~d~~i~~wd~~  154 (166)
                      .++++|.++   .+++.+.++.|.-.++.
T Consensus       270 ~t~~afg~d~~~lyVt~~~~g~i~~~~~~  298 (314)
T d1pjxa_         270 PSNLHFKPQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred             EEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence            889999883   45666677888887764

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.53  E-value=0.0036  Score=40.03  Aligned_cols=111  Identities=3%  Similarity=-0.089  Sum_probs=68.6

Q ss_pred             CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe
Q psy16373         45 QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI  122 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~  122 (166)
                      ....++++  +++++++-..+..+..++...................++++++++.+++...++.+..+|..........
T Consensus        98 ~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~  177 (260)
T d1rwia_          98 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLP  177 (260)
T ss_dssp             CSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECC
T ss_pred             eecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccccccccceeeeee
Confidence            34577887  5666666555666777766543322211112234578999999998888888889999997654333222


Q ss_pred             ecccccEEEEEEcC-CeEEEee-cCCcEEEEECCc
Q psy16373        123 QAHDGCIHALTYSD-SYVISLG-QDERLCVWDRFQ  155 (166)
Q Consensus       123 ~~~~~~v~~i~~~~-~~l~~~~-~d~~i~~wd~~~  155 (166)
                      ...-.....+++++ +.|+.+. ..+.|..++...
T Consensus       178 ~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~  212 (260)
T d1rwia_         178 FTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS  212 (260)
T ss_dssp             CSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTC
T ss_pred             ccccCCCccceeeeeeeeeeeecCCCEEEEEeCCC
Confidence            22334457888877 3444444 466777776543

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=97.28  E-value=0.0088  Score=38.98  Aligned_cols=116  Identities=13%  Similarity=-0.022  Sum_probs=77.9

Q ss_pred             ccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccce-ehh--cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC
Q psy16373         42 AHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL-FTL--HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG  116 (166)
Q Consensus        42 ~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~-~~~--~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~  116 (166)
                      .....+.++++  +++++++...++.+..++....... ..+  .......+.+.+.++++.+++.+.++.+..+|...+
T Consensus        65 ~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~  144 (302)
T d2p4oa1          65 TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP  144 (302)
T ss_dssp             ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred             cCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCC
Confidence            44567889999  7888888888888888887643221 111  123456789999999999999888899999998776


Q ss_pred             eeeEEeec----------ccccEEEEEEcCC-eEEEeecCCcEEEEECCccc
Q psy16373        117 ACMYSIQA----------HDGCIHALTYSDS-YVISLGQDERLCVWDRFQGH  157 (166)
Q Consensus       117 ~~~~~~~~----------~~~~v~~i~~~~~-~l~~~~~d~~i~~wd~~~~~  157 (166)
                      ........          .......+.++.+ .+++.+..+.|..++.....
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~~~~~~~i~~~~~~~~~  196 (302)
T d2p4oa1         145 SGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTD  196 (302)
T ss_dssp             EEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTS
T ss_pred             cceeEecCCccceeeccCcccccccccccCCceeeecCCCCeEEeccccccc
Confidence            53322211          1124566777775 44455567778888776543

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=97.13  E-value=0.016  Score=38.94  Aligned_cols=121  Identities=7%  Similarity=0.049  Sum_probs=70.6

Q ss_pred             CCceEEEEe--cCcEEEEEe-cCCeEEEEEcccccceehh-------------------cCCCCceEEEEEcCCCCEEEE
Q psy16373         44 HQPITVLEC--VSNRVITGS-QDHTLKVYKLEDQQLLFTL-------------------HGHCGPITTLFIDGVSMMSGS  101 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~~~~-~d~~v~v~~~~~~~~~~~~-------------------~~~~~~v~~~~~~~~~~~~~~  101 (166)
                      ......+.|  ++++++... .++.|.+|+....+.....                   ..+......+.++|+++++++
T Consensus       192 g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyv  271 (365)
T d1jofa_         192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA  271 (365)
T ss_dssp             TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred             CCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEE
Confidence            345677888  777765544 5899999998765322110                   011223567899999998877


Q ss_pred             ecC------CCcEEEEeCcCCeeeEE---e---ecccccEEEEEEcC---CeEEEe-ecCCcEEEEECCcc--cceeeee
Q psy16373        102 GSQ------DGLLCVWDTVTGACMYS---I---QAHDGCIHALTYSD---SYVISL-GQDERLCVWDRFQG--HLLSTIQ  163 (166)
Q Consensus       102 ~~~------d~~v~~~d~~~~~~~~~---~---~~~~~~v~~i~~~~---~~l~~~-~~d~~i~~wd~~~~--~~~~~~~  163 (166)
                      +..      ...+..|++.....+..   +   .........++++|   .+|+++ ..++.|.+|++...  ..+.++.
T Consensus       272 snr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~~l~~~~~~~  351 (365)
T d1jofa_         272 SSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFLHRVARVR  351 (365)
T ss_dssp             EEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEEEEEEEEE
T ss_pred             EcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCCcCcEEEEEE
Confidence            632      22366776653322211   1   11223446688886   356555 46789999976543  3344444


Q ss_pred             e
Q psy16373        164 L  164 (166)
Q Consensus       164 ~  164 (166)
                      +
T Consensus       352 v  352 (365)
T d1jofa_         352 I  352 (365)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=97.05  E-value=0.027  Score=40.32  Aligned_cols=60  Identities=23%  Similarity=0.281  Sum_probs=44.7

Q ss_pred             CcEEEEeCcCCeeeEEeeccccc-EEEEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        106 GLLCVWDTVTGACMYSIQAHDGC-IHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       106 ~~v~~~d~~~~~~~~~~~~~~~~-v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      |.+.-||+.+++.+......... --.++-..+.+++++.|+.++.+|.++|+.+.+++++
T Consensus       457 G~l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~  517 (573)
T d1kb0a2         457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTG  517 (573)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             ccEEEeCCCCCceEeeecCCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECC
Confidence            35777888888887776532211 1234445678899999999999999999999998875

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=97.02  E-value=0.028  Score=40.06  Aligned_cols=59  Identities=17%  Similarity=0.276  Sum_probs=44.4

Q ss_pred             CcEEEEeCcCCeeeEEeecccccEE--EEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        106 GLLCVWDTVTGACMYSIQAHDGCIH--ALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       106 ~~v~~~d~~~~~~~~~~~~~~~~v~--~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      |.+.-+|+.+++.+...... .+..  .++-..+.++.++.|+.++.+|.++|+.+.+++++
T Consensus       438 G~l~A~D~~tGk~~W~~~~~-~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~  498 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQ  498 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             cceEEEeCCCCeEeeeccCC-CCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECC
Confidence            46778888888887765432 1111  24445678889999999999999999999998875

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.01  E-value=0.016  Score=37.20  Aligned_cols=116  Identities=9%  Similarity=0.146  Sum_probs=78.0

Q ss_pred             CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehh--cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373         45 QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTL--HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY  120 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~  120 (166)
                      .....+++  ++..+++....+.+.+++.. ++.+..+  ..+......+++.++++.+++....+.|.+||. +++.+.
T Consensus       114 ~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~-~G~~~~  191 (279)
T d1q7fa_         114 QHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLR  191 (279)
T ss_dssp             SCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEE
T ss_pred             cccceeccccCCcEEEEeeccceeeEeccC-CceeecccccccccccceeeeccceeEEeeeccccceeeeec-CCceee
Confidence            34566777  56666666666777777764 4444443  234566788999999999998888999999996 566666


Q ss_pred             Eeec--ccccEEEEEEcC-CeEEEee-c-CCcEEEEECCcccceeeee
Q psy16373        121 SIQA--HDGCIHALTYSD-SYVISLG-Q-DERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       121 ~~~~--~~~~v~~i~~~~-~~l~~~~-~-d~~i~~wd~~~~~~~~~~~  163 (166)
                      .+..  .......|++++ +.++.+. . ++.|.+|+ .+|+.+.++.
T Consensus       192 ~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~-~~G~~~~~~~  238 (279)
T d1q7fa_         192 QIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT-QDGQLISALE  238 (279)
T ss_dssp             EESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC-TTSCEEEEEE
T ss_pred             eecccccccCCcccccccCCeEEEEECCCCcEEEEEC-CCCCEEEEEe
Confidence            6632  233467889987 3344443 3 44688888 4677766654

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=96.99  E-value=0.0084  Score=42.98  Aligned_cols=60  Identities=18%  Similarity=0.160  Sum_probs=43.5

Q ss_pred             CcEEEEeCcCCeeeEEeecccccEE-EEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        106 GLLCVWDTVTGACMYSIQAHDGCIH-ALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       106 ~~v~~~d~~~~~~~~~~~~~~~~v~-~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      |.+.-+|+++++.+........... .+....+.+++++.|+.++.+|.++|+.+.+++++
T Consensus       444 G~l~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~  504 (571)
T d2ad6a1         444 GQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMP  504 (571)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             ccEEEeccCCCceeeEcCCCCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECC
Confidence            4677788888887766542211111 23335578889999999999999999999998875

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=96.97  E-value=0.016  Score=36.53  Aligned_cols=92  Identities=12%  Similarity=-0.071  Sum_probs=56.8

Q ss_pred             CCceEEEEe--cCcEEEEEec-CCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecC---CCcEEEEeCcCCe
Q psy16373         44 HQPITVLEC--VSNRVITGSQ-DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQ---DGLLCVWDTVTGA  117 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~~~~~-d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---d~~v~~~d~~~~~  117 (166)
                      ........+  ++..++..+. .+...+|......................|+|+|+.++-.+.   ...+.++++..+.
T Consensus       170 ~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~  249 (269)
T d2hqsa1         170 GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF  249 (269)
T ss_dssp             SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred             cccccccccccccceeEEEeecCCceeeeEeecccccceEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence            344555566  6777666554 444444444333222233334556678899999998874433   3478889987665


Q ss_pred             eeEEeecccccEEEEEEcC
Q psy16373        118 CMYSIQAHDGCIHALTYSD  136 (166)
Q Consensus       118 ~~~~~~~~~~~v~~i~~~~  136 (166)
                      . ..+....+.+...+|+|
T Consensus       250 ~-~~lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         250 K-ARLPATDGQVKFPAWSP  267 (269)
T ss_dssp             E-EECCCSSSEEEEEEECC
T ss_pred             E-EEEeCCCCcEEeEEeCC
Confidence            4 44555567788889988

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.53  E-value=0.016  Score=41.60  Aligned_cols=59  Identities=22%  Similarity=0.252  Sum_probs=44.5

Q ss_pred             CcEEEEeCcCCeeeEEeecccccEE--EEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        106 GLLCVWDTVTGACMYSIQAHDGCIH--ALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       106 ~~v~~~d~~~~~~~~~~~~~~~~v~--~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      |.+.-+|+.+++.+.+...+. ++.  .++-..+.++.++.|+.++.+|.++|+.+.+++++
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~-p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~  526 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTG  526 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             CeEEEEcCCCCcEEeecCCCC-CCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECC
Confidence            567778888888777765432 221  23344578889999999999999999999998875

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=96.43  E-value=0.056  Score=35.42  Aligned_cols=93  Identities=10%  Similarity=0.030  Sum_probs=58.7

Q ss_pred             CCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC----CcEEEEeCcCCe
Q psy16373         44 HQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD----GLLCVWDTVTGA  117 (166)
Q Consensus        44 ~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d----~~v~~~d~~~~~  117 (166)
                      ...+..++|  ++++.++-...+.|..|+...++....+.........++++++++++++...+    +.+...+.....
T Consensus        39 ~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~  118 (319)
T d2dg1a1          39 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN  118 (319)
T ss_dssp             CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred             CcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCce
Confidence            345578888  67777776678999999988765554444455668899999999888775432    335555554443


Q ss_pred             eeEEeec--ccccEEEEEEcC
Q psy16373        118 CMYSIQA--HDGCIHALTYSD  136 (166)
Q Consensus       118 ~~~~~~~--~~~~v~~i~~~~  136 (166)
                      .......  .....+.+++.+
T Consensus       119 ~~~~~~~~~~~~~~nd~~~d~  139 (319)
T d2dg1a1         119 LQDIIEDLSTAYCIDDMVFDS  139 (319)
T ss_dssp             CEEEECSSSSCCCEEEEEECT
T ss_pred             eeeeccCCCcccCCcceeEEe
Confidence            3222221  122456677766

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=96.00  E-value=0.046  Score=39.28  Aligned_cols=111  Identities=14%  Similarity=0.045  Sum_probs=70.3

Q ss_pred             cCcEEEEEecCCeEEEEEc-ccccceehhcCCC----------Cc-eEEEEEcCC----CCEEEEecCCCcEEEEeCcCC
Q psy16373         53 VSNRVITGSQDHTLKVYKL-EDQQLLFTLHGHC----------GP-ITTLFIDGV----SMMSGSGSQDGLLCVWDTVTG  116 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~-~~~~~~~~~~~~~----------~~-v~~~~~~~~----~~~~~~~~~d~~v~~~d~~~~  116 (166)
                      ++.++++++.++.+...|. .+++.+.++....          .. -..+++.++    ...++.++.|+.+.-.|.+++
T Consensus        62 ~g~ly~~t~~~~~v~a~d~~~tG~~~W~~~~~~~~~~~~~~~~~~~~RGv~~~~~~~~~~~~v~~~t~dg~l~Alda~tG  141 (596)
T d1w6sa_          62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG  141 (596)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred             CCEEEEeeCCCCcEEEEeCCCCCCEEEEecCCCCcccccccccccccceeEEecCCCCCceEEEEEeCCCCeEeeccccC
Confidence            4444444555677888886 5787776653211          01 123444332    346778889999999999999


Q ss_pred             eeeEEeecccc----cEE-EEEEcCCeEEEeec------CCcEEEEECCcccceeeee
Q psy16373        117 ACMYSIQAHDG----CIH-ALTYSDSYVISLGQ------DERLCVWDRFQGHLLSTIQ  163 (166)
Q Consensus       117 ~~~~~~~~~~~----~v~-~i~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~  163 (166)
                      +.+..+.....    .++ .-.+..+.++.+..      .|.|+-+|.++|+.+.++.
T Consensus       142 ~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~  199 (596)
T d1w6sa_         142 ETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY  199 (596)
T ss_dssp             CEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred             ceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEee
Confidence            99888753211    111 11223356666654      4889999999999998865

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.50  E-value=0.01  Score=41.39  Aligned_cols=103  Identities=9%  Similarity=0.046  Sum_probs=66.0

Q ss_pred             EEEEecCCeEEEEEcccccceehhcC---CCCceEEEEEcCCCCEEEEec---------CCCcEEEEeCcCCeeeEE--e
Q psy16373         57 VITGSQDHTLKVYKLEDQQLLFTLHG---HCGPITTLFIDGVSMMSGSGS---------QDGLLCVWDTVTGACMYS--I  122 (166)
Q Consensus        57 l~~~~~d~~v~v~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~---------~d~~v~~~d~~~~~~~~~--~  122 (166)
                      ++.-..+|.+.+||+.+++....+..   ....+....++|++++++...         ..+.+.++|+.++.....  .
T Consensus        30 ~~~~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~  109 (465)
T d1xfda1          30 FIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPP  109 (465)
T ss_dssp             BCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCT
T ss_pred             EEEEeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCc
Confidence            33345678899999988754322221   233567788999999877653         356788999988764322  2


Q ss_pred             ecccccEEEEEEcCC--eEEEeecCCcEEEEECCccccee
Q psy16373        123 QAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLS  160 (166)
Q Consensus       123 ~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~~~  160 (166)
                      ......+....|+|+  .++-.. ++.|.+.+..++..++
T Consensus       110 ~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~  148 (465)
T d1xfda1         110 EVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIR  148 (465)
T ss_dssp             TCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEE
T ss_pred             cCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEE
Confidence            222345556889983  555443 5678888877665543

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.47  E-value=0.11  Score=36.00  Aligned_cols=74  Identities=4%  Similarity=-0.222  Sum_probs=48.6

Q ss_pred             eEEEEe--cCcEEEEEe---------cCCeEEEEEcccccceeh--hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeC
Q psy16373         47 ITVLEC--VSNRVITGS---------QDHTLKVYKLEDQQLLFT--LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT  113 (166)
Q Consensus        47 i~~~~~--~~~~l~~~~---------~d~~v~v~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~  113 (166)
                      +....+  ++++++...         ..+...++|+.+++....  .......+....|+|+|+.++-.. ++.+.+.+.
T Consensus        63 ~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~  141 (465)
T d1xfda1          63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAH  141 (465)
T ss_dssp             CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESS
T ss_pred             cceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEec
Confidence            344444  778776653         357788999988754322  223344566788999999887654 667888887


Q ss_pred             cCCeeeEE
Q psy16373        114 VTGACMYS  121 (166)
Q Consensus       114 ~~~~~~~~  121 (166)
                      ..+..++.
T Consensus       142 ~~~~~~~l  149 (465)
T d1xfda1         142 VGKQAIRV  149 (465)
T ss_dssp             SSSCCEEE
T ss_pred             CCCceEEE
Confidence            76655443

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=95.42  E-value=0.032  Score=39.92  Aligned_cols=110  Identities=14%  Similarity=0.088  Sum_probs=70.8

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCC----------Cce-EEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC----------GPI-TTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS  121 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~----------~~v-~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~  121 (166)
                      .+..++.++.++.|.-+|.++++.+.++....          ..+ ..+.+.  ...+..++.|+.+.-.|..+++.+..
T Consensus        76 ~~g~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~v~~~t~~g~l~alda~tG~~~W~  153 (573)
T d1kb0a2          76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGAWDGRLIALDAATGKEVWH  153 (573)
T ss_dssp             ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             ECCEEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEE--CCcEEEEecccceeeeccccccceec
Confidence            35677788889999999999998887654211          011 122232  23555677889999999999998876


Q ss_pred             eecccc---cEE---EEEEcCCeEEEeec------CCcEEEEECCcccceeeeee
Q psy16373        122 IQAHDG---CIH---ALTYSDSYVISLGQ------DERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       122 ~~~~~~---~v~---~i~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ......   .+.   .-....+.++.++.      .|.|+.+|.++|+.+.++..
T Consensus       154 ~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t  208 (573)
T d1kb0a2         154 QNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS  208 (573)
T ss_dssp             EETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred             ccCccCCcceEEeecceEEEeccEEEeeccccccccceEEEEecCCccceeeeee
Confidence            543211   111   01112345555543      46799999999999987753

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=95.33  E-value=0.049  Score=38.83  Aligned_cols=110  Identities=15%  Similarity=0.096  Sum_probs=71.6

Q ss_pred             cCcEEEEEecCCeEEEEEcccccceehhcCCCC----------ce-EEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373         53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG----------PI-TTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS  121 (166)
Q Consensus        53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~----------~v-~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~  121 (166)
                      .+..++.++.++.|.-.|.++++.+.++.....          .+ ..+...  +..++.+..++.+.-.|..+++.+..
T Consensus        65 ~~g~vyv~t~~~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~g~l~Alda~tG~~~w~  142 (560)
T d1kv9a2          65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GDKVYVGTLDGRLIALDAKTGKAIWS  142 (560)
T ss_dssp             ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             ECCEEEEECCCCeEEEEeCCCCCEEEEECCCCCccccccccccccccCccee--CCeEEEEeCCCEEEEEECCCCcEEec
Confidence            456777788899999999999988876532110          00 112211  34677778899999999999999887


Q ss_pred             eecccc-cEEEE----EEcCCeEEEeec------CCcEEEEECCcccceeeeee
Q psy16373        122 IQAHDG-CIHAL----TYSDSYVISLGQ------DERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       122 ~~~~~~-~v~~i----~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ...... .-..+    ....+.++.+..      .|.|..+|.++|+.+.++..
T Consensus       143 ~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t  196 (560)
T d1kv9a2         143 QQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT  196 (560)
T ss_dssp             EECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred             cCccCcccceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeeee
Confidence            753221 10111    112245555443      36799999999999988764

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=95.29  E-value=0.2  Score=32.68  Aligned_cols=80  Identities=6%  Similarity=0.050  Sum_probs=52.3

Q ss_pred             CceEEEEEcCCCCEE-EEecCCCcEEEEeCcCC-eeeEEe-------ecccccEEEEEEcC--CeEEEeecCCcEEEEEC
Q psy16373         85 GPITTLFIDGVSMMS-GSGSQDGLLCVWDTVTG-ACMYSI-------QAHDGCIHALTYSD--SYVISLGQDERLCVWDR  153 (166)
Q Consensus        85 ~~v~~~~~~~~~~~~-~~~~~d~~v~~~d~~~~-~~~~~~-------~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~  153 (166)
                      ...+.++|+|+++.+ ++-+..+.|..|++... ......       .......-.++++.  +..++....+.|.++|.
T Consensus       177 ~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p  256 (319)
T d2dg1a1         177 SVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK  256 (319)
T ss_dssp             SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred             ceeeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC
Confidence            345789999998754 55567789999987532 111111       11112345688876  34555556789999995


Q ss_pred             Ccccceeeeeec
Q psy16373        154 FQGHLLSTIQLQ  165 (166)
Q Consensus       154 ~~~~~~~~~~~~  165 (166)
                       +|+.+.++.++
T Consensus       257 -~G~~l~~i~~P  267 (319)
T d2dg1a1         257 -RGYPIGQILIP  267 (319)
T ss_dssp             -TSCEEEEEECT
T ss_pred             -CCcEEEEEeCC
Confidence             78888888764

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=94.78  E-value=0.031  Score=40.24  Aligned_cols=59  Identities=17%  Similarity=0.224  Sum_probs=43.0

Q ss_pred             CcEEEEeCcCCeeeEEeecccccEE--EEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373        106 GLLCVWDTVTGACMYSIQAHDGCIH--ALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ  165 (166)
Q Consensus       106 ~~v~~~d~~~~~~~~~~~~~~~~v~--~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  165 (166)
                      |.+.-||+.+++.+...... .+..  .+.-..+.++.++.|+.++.+|.++|+.+.+++++
T Consensus       453 G~l~A~D~~TG~~~W~~~~~-~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~  513 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIP  513 (596)
T ss_dssp             EEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             ceEEEEeCCCCceecccCCC-CCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECC
Confidence            56788888888877655321 1111  12224578888999999999999999999998865

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.78  E-value=0.27  Score=31.65  Aligned_cols=89  Identities=10%  Similarity=0.087  Sum_probs=61.8

Q ss_pred             eEEEEe--cCcE-EEEEecCCeEEEEEccccc------c--eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC
Q psy16373         47 ITVLEC--VSNR-VITGSQDHTLKVYKLEDQQ------L--LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT  115 (166)
Q Consensus        47 i~~~~~--~~~~-l~~~~~d~~v~v~~~~~~~------~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~  115 (166)
                      -+.+.+  +++. +++-+..+.|..+++....      .  ...+.+..+....+++..+|++.++.-..+.|..||. .
T Consensus       150 ~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~  228 (295)
T d2ghsa1         150 PNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-D  228 (295)
T ss_dssp             EEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-T
T ss_pred             cceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-C
Confidence            456666  4554 4555567888888874321      1  1112233455788999999999988777889999995 6


Q ss_pred             CeeeEEeecccccEEEEEEcC
Q psy16373        116 GACMYSIQAHDGCIHALTYSD  136 (166)
Q Consensus       116 ~~~~~~~~~~~~~v~~i~~~~  136 (166)
                      ++.+..+......+++++|-.
T Consensus       229 G~~~~~i~lP~~~~T~~~FGG  249 (295)
T d2ghsa1         229 GNHIARYEVPGKQTTCPAFIG  249 (295)
T ss_dssp             CCEEEEEECSCSBEEEEEEES
T ss_pred             CcEeeEecCCCCceEEEEEeC
Confidence            888888876666789999963

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.31  E-value=0.31  Score=30.33  Aligned_cols=81  Identities=10%  Similarity=-0.029  Sum_probs=52.3

Q ss_pred             CcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec----CC--CcEEEEeCcCCeeeEEee----
Q psy16373         54 SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS----QD--GLLCVWDTVTGACMYSIQ----  123 (166)
Q Consensus        54 ~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~d--~~v~~~d~~~~~~~~~~~----  123 (166)
                      |+.++..+ ++.|.+.|+.+++.. .+..+...+...+|+|+|+.++-..    .+  ..+.+.+..+++......    
T Consensus        12 G~~v~f~~-~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~   89 (281)
T d1k32a2          12 GDRIIFVC-CDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGK   89 (281)
T ss_dssp             TTEEEEEE-TTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEE
T ss_pred             CCEEEEEe-CCcEEEEECCCCCEE-EEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCC
Confidence            77766654 467888899877653 4555667788999999999887542    22  247777777776543211    


Q ss_pred             --cccccEEEEEEcC
Q psy16373        124 --AHDGCIHALTYSD  136 (166)
Q Consensus       124 --~~~~~v~~i~~~~  136 (166)
                        ..........|+|
T Consensus        90 ~~~~~~~~~~~~~sp  104 (281)
T d1k32a2          90 STGRRMFTDVAGFDP  104 (281)
T ss_dssp             EETTEECSEEEEECT
T ss_pred             ccCccccccccccCC
Confidence              1122345677877

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=94.11  E-value=0.45  Score=31.35  Aligned_cols=105  Identities=13%  Similarity=0.063  Sum_probs=63.4

Q ss_pred             cCcEEEEEecC-----C------eEEEEEcccccceeh--h-cCCCCceEEEEEcCCCCEEEEecCC-CcEEEEeCcCCe
Q psy16373         53 VSNRVITGSQD-----H------TLKVYKLEDQQLLFT--L-HGHCGPITTLFIDGVSMMSGSGSQD-GLLCVWDTVTGA  117 (166)
Q Consensus        53 ~~~~l~~~~~d-----~------~v~v~~~~~~~~~~~--~-~~~~~~v~~~~~~~~~~~~~~~~~d-~~v~~~d~~~~~  117 (166)
                      +++.++.|+.+     +      .+.+||..+++....  . ..+.......++.+++..++.|+.+ ..+.+||..+..
T Consensus        30 ~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~  109 (387)
T d1k3ia3          30 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS  109 (387)
T ss_dssp             TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred             CCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCccCc
Confidence            77888877742     1      367899988754321  1 1233334456788899999988765 589999998765


Q ss_pred             eeE--EeecccccEEEEEEcC-CeEEEeecC------CcEEEEECCccc
Q psy16373        118 CMY--SIQAHDGCIHALTYSD-SYVISLGQD------ERLCVWDRFQGH  157 (166)
Q Consensus       118 ~~~--~~~~~~~~v~~i~~~~-~~l~~~~~d------~~i~~wd~~~~~  157 (166)
                      ...  .+...+.....+.... ..++.++.+      ..+.+||..+.+
T Consensus       110 w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~  158 (387)
T d1k3ia3         110 WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT  158 (387)
T ss_dssp             EEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred             ccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCc
Confidence            432  2222222233333333 466666542      368899987754

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.04  E-value=0.17  Score=36.10  Aligned_cols=109  Identities=13%  Similarity=0.063  Sum_probs=67.4

Q ss_pred             CcEEEEEe-cCCeEEEEEcc-cccceehhcCCCC-----------ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373         54 SNRVITGS-QDHTLKVYKLE-DQQLLFTLHGHCG-----------PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY  120 (166)
Q Consensus        54 ~~~l~~~~-~d~~v~v~~~~-~~~~~~~~~~~~~-----------~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~  120 (166)
                      +..++.++ .++.|...|.. +++.+.++.....           .-..+++.  +..++.++.|+.+.-.|.++++.+.
T Consensus        62 ~g~vyv~t~~~~~v~Alda~~tG~~~W~~~~~~~~~~~~~~~~~~~~rg~a~~--~~~i~~~~~~g~l~alda~tG~~~w  139 (571)
T d2ad6a1          62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG--AGQIVKKQANGHLLALDAKTGKINW  139 (571)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEEE
T ss_pred             CCEEEEecCCCCeEEEEeCCCCCceEEEecCCCCcccccccccCcCCCcceee--CCeEEEEeCCCcEEeeehhhhhhhc
Confidence            45555555 46888889975 6887766532110           00123333  2456667889999999999999877


Q ss_pred             Eeecccc----cEE-EEEEcCCeEEEeec------CCcEEEEECCcccceeeeee
Q psy16373        121 SIQAHDG----CIH-ALTYSDSYVISLGQ------DERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus       121 ~~~~~~~----~v~-~i~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~  164 (166)
                      .......    .++ .-....+.++.+..      ++.|+.+|+++|+.+.++..
T Consensus       140 ~~~~~~~~~~~~~t~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t  194 (571)
T d2ad6a1         140 EVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA  194 (571)
T ss_dssp             EEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred             cccccccccccceeecCeEeCCeEEEeeccccccccCcEEEEECCCCcEEEEEec
Confidence            6542211    111 11122255555553      67899999999999987653

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.01  E-value=0.52  Score=31.75  Aligned_cols=95  Identities=14%  Similarity=0.019  Sum_probs=58.4

Q ss_pred             CceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec
Q psy16373         45 QPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA  124 (166)
Q Consensus        45 ~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~  124 (166)
                      ..|..++++++.++.. .++.+..++...-........-..++..+.++|  ..++....++.+.++++.+++......+
T Consensus        87 p~v~~vafs~d~l~v~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p--~~~~l~~~~~~~~~~~l~~~~~~~~~~~  163 (381)
T d1xipa_          87 PDVIFVCFHGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVN--NTLVILNSVNDLSALDLRTKSTKQLAQN  163 (381)
T ss_dssp             TTEEEEEEETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECS--SEEEEEETTSEEEEEETTTCCEEEEEES
T ss_pred             CCeEEEEeeCCEEEEE-eCCCEEEEEeeccccccccccccccccceecCC--ceeEEEecCCCEEEEEeccCccccccCC
Confidence            3688899977776665 456778787765433333333445677787777  4566667789999999987753322110


Q ss_pred             -----ccccEEEEEEcCC--eEEEe
Q psy16373        125 -----HDGCIHALTYSDS--YVISL  142 (166)
Q Consensus       125 -----~~~~v~~i~~~~~--~l~~~  142 (166)
                           -.+.+.++.|+++  .++++
T Consensus       164 v~~~~~~~~~~~v~ws~kgkq~v~~  188 (381)
T d1xipa_         164 VTSFDVTNSQLAVLLKDRSFQSFAW  188 (381)
T ss_dssp             EEEEEECSSEEEEEETTSCEEEEEE
T ss_pred             cceEEecCCceEEEEeCCcEEEEEe
Confidence                 1245666777662  44444

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=93.28  E-value=0.66  Score=30.68  Aligned_cols=111  Identities=5%  Similarity=-0.032  Sum_probs=68.1

Q ss_pred             CceEEEEe--cCcEEEEEec-CCeEEEEEcccccce---ehh--cCCCCceEEEEEcCCCCEE-EEecCCCcEEEEeCcC
Q psy16373         45 QPITVLEC--VSNRVITGSQ-DHTLKVYKLEDQQLL---FTL--HGHCGPITTLFIDGVSMMS-GSGSQDGLLCVWDTVT  115 (166)
Q Consensus        45 ~~i~~~~~--~~~~l~~~~~-d~~v~v~~~~~~~~~---~~~--~~~~~~v~~~~~~~~~~~~-~~~~~d~~v~~~d~~~  115 (166)
                      ..+.++.|  +++++++++. ...|.+|+......+   ...  .........+.|+|+++++ ++...++.|.+|+...
T Consensus       145 ~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~  224 (365)
T d1jofa_         145 TGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDP  224 (365)
T ss_dssp             CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred             CcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecC
Confidence            34778888  7888887764 457888876543221   111  1234567899999998877 4455678999999865


Q ss_pred             Ceee--EEee-----------------cccccEEEEEEcC--CeEEEeec-C-----CcEEEEECCc
Q psy16373        116 GACM--YSIQ-----------------AHDGCIHALTYSD--SYVISLGQ-D-----ERLCVWDRFQ  155 (166)
Q Consensus       116 ~~~~--~~~~-----------------~~~~~v~~i~~~~--~~l~~~~~-d-----~~i~~wd~~~  155 (166)
                      ....  ....                 .+......+.++|  .+++++.. +     ..|..|++..
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~  291 (365)
T d1jofa_         225 ATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD  291 (365)
T ss_dssp             TTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT
T ss_pred             CCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecC
Confidence            5322  1111                 1112355788888  46666543 2     2366676654

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.56  E-value=0.57  Score=29.04  Aligned_cols=66  Identities=12%  Similarity=0.024  Sum_probs=43.7

Q ss_pred             EcCC--CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEee-cCC-----cEEEEECCcccce
Q psy16373         92 IDGV--SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLG-QDE-----RLCVWDRFQGHLL  159 (166)
Q Consensus        92 ~~~~--~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~-~d~-----~i~~wd~~~~~~~  159 (166)
                      .+|+  |+.++-. .++.|.+.|+..++.. .+..+.+.+...+|+|+  .|+... .++     .|.+++..+++..
T Consensus         6 ~sPdi~G~~v~f~-~~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~   81 (281)
T d1k32a2           6 LNPDIHGDRIIFV-CCDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIK   81 (281)
T ss_dssp             EEEEEETTEEEEE-ETTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEE
T ss_pred             cCCCCCCCEEEEE-eCCcEEEEECCCCCEE-EEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceE
Confidence            4677  7777654 3567888899887754 45556677888999994  555432 222     4777777666543

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=90.77  E-value=1.2  Score=28.36  Aligned_cols=109  Identities=10%  Similarity=-0.029  Sum_probs=68.1

Q ss_pred             CCceEEEEe-cCcEEEEEecCCeEEEEEcccccceeh--hcC--CCCceEEEEEcCCCCEEEEecC----CCcEEEEeCc
Q psy16373         44 HQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFT--LHG--HCGPITTLFIDGVSMMSGSGSQ----DGLLCVWDTV  114 (166)
Q Consensus        44 ~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~--~~~--~~~~v~~~~~~~~~~~~~~~~~----d~~v~~~d~~  114 (166)
                      ...+.++++ ....|+.++.+ .+.++|..+++....  ...  ....++.+.+.|+|+..++...    .+.-.+|.+.
T Consensus        58 ~~~~~~i~~~~dg~l~va~~~-gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~  136 (295)
T d2ghsa1          58 PFMGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA  136 (295)
T ss_dssp             SSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred             CCCcEEEEEecCCCEEEEEeC-ccEEeecccceeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeec
Confidence            346778888 44444455554 688899988764322  111  2235788999999998776532    2345667666


Q ss_pred             CCeeeEEeecccccEEEEEEcCC---eEEEeecCCcEEEEECC
Q psy16373        115 TGACMYSIQAHDGCIHALTYSDS---YVISLGQDERLCVWDRF  154 (166)
Q Consensus       115 ~~~~~~~~~~~~~~v~~i~~~~~---~l~~~~~d~~i~~wd~~  154 (166)
                      .++....... -..-+.++|+++   .+++-+..+.|..|++.
T Consensus       137 ~g~~~~~~~~-~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d  178 (295)
T d2ghsa1         137 KGKVTKLFAD-ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD  178 (295)
T ss_dssp             TTEEEEEEEE-ESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred             CCcEEEEeec-cCCcceeeecCCCceEEEeecccceeeEeeec
Confidence            6655444432 234577899873   44555567888888764

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.39  E-value=2  Score=30.40  Aligned_cols=68  Identities=10%  Similarity=0.073  Sum_probs=48.8

Q ss_pred             CEEEEecCCCcEEEEeCcCCeeeEEeeccc--------ccE-EEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373         97 MMSGSGSQDGLLCVWDTVTGACMYSIQAHD--------GCI-HALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL  164 (166)
Q Consensus        97 ~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~--------~~v-~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~  164 (166)
                      ..+..++.++.|.-.|.++++.+.++....        ..+ ..++...+.++.++.|+.+...|.++|+.+.+...
T Consensus        69 g~vy~~t~~~~v~AlDa~TG~~lW~~~~~~~~~~~~~~~~~~rg~a~~~~~i~~~t~~~~l~alda~tG~~~W~~~~  145 (582)
T d1flga_          69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKF  145 (582)
T ss_dssp             TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred             CEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCCccccccccccCCceEeCCceEEecCCCeEEEecccccceeeeecc
Confidence            345566778889999999999988764211        011 12445567888899999999999999998876543

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.64  E-value=1.9  Score=26.36  Aligned_cols=100  Identities=12%  Similarity=-0.018  Sum_probs=56.9

Q ss_pred             EEEEEecCCe--EEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC-CcEEEE--eCcCCeeeEEeecccccEE
Q psy16373         56 RVITGSQDHT--LKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD-GLLCVW--DTVTGACMYSIQAHDGCIH  130 (166)
Q Consensus        56 ~l~~~~~d~~--v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d-~~v~~~--d~~~~~~~~~~~~~~~~v~  130 (166)
                      .+++...++.  +.+.++..... ..+...........++|++..++..+.+ +...+|  +...+..  ....+.....
T Consensus       141 ~~~~~~~~g~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~  217 (269)
T d2hqsa1         141 LAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QVLSSTFLDE  217 (269)
T ss_dssp             EEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--EECCCSSSCE
T ss_pred             ceecccccCCceEeeeecccccc-eeeecccccccccccccccceeEEEeecCCceeeeEeecccccc--eEeecCcccc
Confidence            3444444554  44445544432 2233355567778899998887766544 444444  4444432  3333455667


Q ss_pred             EEEEcCC--eEE-Eeec--CCcEEEEECCcccc
Q psy16373        131 ALTYSDS--YVI-SLGQ--DERLCVWDRFQGHL  158 (166)
Q Consensus       131 ~i~~~~~--~l~-~~~~--d~~i~~wd~~~~~~  158 (166)
                      ...|+|+  .|+ +...  ...|.++++..+..
T Consensus       218 ~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~  250 (269)
T d2hqsa1         218 TPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFK  250 (269)
T ss_dssp             EEEECTTSSEEEEEEEETTEEEEEEEETTSCCE
T ss_pred             ceEECCCCCEEEEEEcCCCCcEEEEEECCCCCE
Confidence            7889994  444 3332  34688899876554

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.62  E-value=2.9  Score=27.25  Aligned_cols=95  Identities=7%  Similarity=0.079  Sum_probs=61.3

Q ss_pred             CCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-CeEEE
Q psy16373         63 DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-SYVIS  141 (166)
Q Consensus        63 d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~~l~~  141 (166)
                      ...|.+.|+.+.....+..  . ...+.-.+|..+.++.-+ ..++.++|+++.+.+..+.- .++|.--.|-. +.|+.
T Consensus        44 ~~~VvIidl~n~~~~~Rrp--i-~AdsAIMhP~~~IiALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~~L~l  118 (327)
T d1utca2          44 QAQVVIIDMNDPSNPIRRP--I-SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVAL  118 (327)
T ss_dssp             EEEEEEEETTSTTSCEEEE--C-CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEESSSSEEEE
T ss_pred             CceEEEEECCCCCcceecc--c-chhhhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEc-CCCcEEEEecCCCEEEE
Confidence            3578888887654221110  0 112344688888887765 56899999999999998875 44665667754 66655


Q ss_pred             eecCCcEEEEECCcc-cceeeee
Q psy16373        142 LGQDERLCVWDRFQG-HLLSTIQ  163 (166)
Q Consensus       142 ~~~d~~i~~wd~~~~-~~~~~~~  163 (166)
                      .+ +..|+-|++... .+.+.+.
T Consensus       119 VT-~taVYHW~~~g~s~P~k~fd  140 (327)
T d1utca2         119 VT-DNAVYHWSMEGESQPVKMFD  140 (327)
T ss_dssp             EC-SSEEEEEESSSSCCCEEEEE
T ss_pred             Ec-CCceEEEcccCCCCchhhhh
Confidence            55 467999999532 3444443

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=85.66  E-value=4  Score=27.98  Aligned_cols=71  Identities=14%  Similarity=0.081  Sum_probs=46.2

Q ss_pred             CCCEEEEe-cCCCcEEEEeCcCCeeeEEeec-ccccEEEEEEc--C--CeEEEeecCC------------------cEEE
Q psy16373         95 VSMMSGSG-SQDGLLCVWDTVTGACMYSIQA-HDGCIHALTYS--D--SYVISLGQDE------------------RLCV  150 (166)
Q Consensus        95 ~~~~~~~~-~~d~~v~~~d~~~~~~~~~~~~-~~~~v~~i~~~--~--~~l~~~~~d~------------------~i~~  150 (166)
                      ||+++... ..+..|-+.|+++.+......- ....+..++..  |  .+++..+.+.                  .+.+
T Consensus        98 DGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~  177 (459)
T d1fwxa2          98 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA  177 (459)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEE
T ss_pred             ceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEE
Confidence            56776655 4678999999998887554432 23345555554  3  3666665532                  3667


Q ss_pred             EECCcccceeeeeec
Q psy16373        151 WDRFQGHLLSTIQLQ  165 (166)
Q Consensus       151 wd~~~~~~~~~~~~~  165 (166)
                      .|..+.+...++.++
T Consensus       178 ID~~tm~V~~QV~V~  192 (459)
T d1fwxa2         178 VDADKWEVAWQVLVS  192 (459)
T ss_dssp             EETTTTEEEEEEEES
T ss_pred             EecCCceEEEEeeeC
Confidence            888888887777664

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.51  E-value=3.7  Score=26.70  Aligned_cols=113  Identities=10%  Similarity=0.125  Sum_probs=70.3

Q ss_pred             eeeeeccCCceEEEEecC-----cEEEEEe---cCCeEEEEEcccccc-ee-------hh----cCCCCceEEEEEcCCC
Q psy16373         37 VESTRAHHQPITVLECVS-----NRVITGS---QDHTLKVYKLEDQQL-LF-------TL----HGHCGPITTLFIDGVS   96 (166)
Q Consensus        37 ~~~~~~~~~~i~~~~~~~-----~~l~~~~---~d~~v~v~~~~~~~~-~~-------~~----~~~~~~v~~~~~~~~~   96 (166)
                      .+.++||.+....+..++     ..++.+.   ..+.+++.++..... -.       .+    ..-.+..-++.+++..
T Consensus       188 sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~ky  267 (327)
T d1utca2         188 SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH  267 (327)
T ss_dssp             EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTT
T ss_pred             CccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccC
Confidence            344567766655555522     2333332   236888888865211 01       11    1123456788888887


Q ss_pred             CEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEE
Q psy16373         97 MMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLC  149 (166)
Q Consensus        97 ~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~  149 (166)
                      ..+..-+.-|.+.++|+.++.++..-+-..++|..-+-+.  .-++....+|.|.
T Consensus       268 giiyviTK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~GqVl  322 (327)
T d1utca2         268 DVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL  322 (327)
T ss_dssp             TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTSEEE
T ss_pred             CEEEEEecCcEEEEEEcccccEEEEeecCCCceEEeccCCCCceEEEECCCCeEE
Confidence            7887888999999999999999887666566665444433  4566666666653