Psyllid ID: psy16397

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60
Protein Sequence
MRVKNQGLTEGTLTAMLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI
Secondary Structure (PSIPRED)
cEEcccccccccEEccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEccEEEEEcccEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mrvknqgltegtLTAMLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI
Flexible Loop (DISEMBL)
mrvknqgltegtLTAMLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI
Low Complexity Region (SEG)
MRVKNQGLTEGTLTAMLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI
Disordered region (IsUnstruct)
*********EGTLTAMLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELN********
Disordered Region (DISOPRED)
*************TAMLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIK*
Disordered Region (DISEMBL)
********TEGTLTAMLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI
Disordered Region (DISPRO)
***********TLTAMLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRVKNQGLTEGTLTAMLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	60	2.2.26 [Sep-21-2011]
Q7Q5Y8	539	Eukaryotic translation in	yes	N/A	0.716	0.079	0.790	2e-14
B4GR63	541	Eukaryotic translation in	N/A	N/A	0.85	0.094	0.679	2e-14
Q2M0S3	541	Eukaryotic translation in	yes	N/A	0.85	0.094	0.679	2e-14
B4QR64	539	Eukaryotic translation in	N/A	N/A	0.85	0.094	0.679	2e-14
B4HFJ3	539	Eukaryotic translation in	N/A	N/A	0.85	0.094	0.679	2e-14
Q9VTU4	539	Eukaryotic translation in	yes	N/A	0.85	0.094	0.679	2e-14
B4PG99	539	Eukaryotic translation in	N/A	N/A	0.85	0.094	0.679	2e-14
B3NH71	539	Eukaryotic translation in	N/A	N/A	0.85	0.094	0.679	2e-14
B3M7W0	539	Eukaryotic translation in	N/A	N/A	0.733	0.081	0.75	2e-14
B4MX71	539	Eukaryotic translation in	N/A	N/A	0.733	0.081	0.727	3e-14

>sp|Q7Q5Y8|EIF3L_ANOGA Eukaryotic translation initiation factor 3 subunit L OS=Anopheles gambiae GN=AGAP006130 PE=3 SV=3

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/43 (79%), Positives = 41/43 (95%)

Query: 17  LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIK 59
           LDFYID +MIHIADTKV+HRYGDFFIRK++KFE+LN++L AIK
Sbjct: 496 LDFYIDKDMIHIADTKVSHRYGDFFIRKVMKFEDLNRRLHAIK 538

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.
Anopheles gambiae (taxid: 7165)

>sp|B4GR63|EIF3L_DROPE Eukaryotic translation initiation factor 3 subunit L OS=Drosophila persimilis GN=GL25016 PE=3 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/53 (67%), Positives = 45/53 (84%), Gaps = 2/53 (3%)

Query: 10  EGTLTA--MLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           EGT  +   LDFYID++MIHIADTKV+HRYGDFF+RKI+KF +LN+KL+ I I
Sbjct: 489 EGTFKSGSELDFYIDDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKNINI 541

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Drosophila persimilis (taxid: 7234)

>sp|Q2M0S3|EIF3L_DROPS Eukaryotic translation initiation factor 3 subunit L OS=Drosophila pseudoobscura pseudoobscura GN=GA19025 PE=3 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/53 (67%), Positives = 45/53 (84%), Gaps = 2/53 (3%)

Query: 10  EGTLTA--MLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           EGT  +   LDFYID++MIHIADTKV+HRYGDFF+RKI+KF +LN+KL+ I I
Sbjct: 489 EGTFKSGSELDFYIDDDMIHIADTKVSHRYGDFFVRKIMKFNDLNRKLKNINI 541

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

>sp|B4QR64|EIF3L_DROSI Eukaryotic translation initiation factor 3 subunit L OS=Drosophila simulans GN=GD12745 PE=3 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/53 (67%), Positives = 45/53 (84%), Gaps = 2/53 (3%)

Query: 10  EGTLTA--MLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           EGT  +   LDFYID++MIHIADTKV+HRYGDFF+RKI+KF +LN+KL+ I I
Sbjct: 487 EGTFKSGSELDFYIDDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKNINI 539

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Drosophila simulans (taxid: 7240)

>sp|B4HFJ3|EIF3L_DROSE Eukaryotic translation initiation factor 3 subunit L OS=Drosophila sechellia GN=GM24677 PE=3 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/53 (67%), Positives = 45/53 (84%), Gaps = 2/53 (3%)

Query: 10  EGTLTA--MLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           EGT  +   LDFYID++MIHIADTKV+HRYGDFF+RKI+KF +LN+KL+ I I
Sbjct: 487 EGTFKSGSELDFYIDDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKNINI 539

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Drosophila sechellia (taxid: 7238)

>sp|Q9VTU4|EIF3L_DROME Eukaryotic translation initiation factor 3 subunit L OS=Drosophila melanogaster GN=CG5642 PE=2 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/53 (67%), Positives = 45/53 (84%), Gaps = 2/53 (3%)

Query: 10  EGTLTA--MLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           EGT  +   LDFYID++MIHIADTKV+HRYGDFF+RKI+KF +LN+KL+ I I
Sbjct: 487 EGTFKSGSELDFYIDDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKNINI 539

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Drosophila melanogaster (taxid: 7227)

>sp|B4PG99|EIF3L_DROYA Eukaryotic translation initiation factor 3 subunit L OS=Drosophila yakuba GN=GE20146 PE=3 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/53 (67%), Positives = 45/53 (84%), Gaps = 2/53 (3%)

Query: 10  EGTLTA--MLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           EGT  +   LDFYID++MIHIADTKV+HRYGDFF+RKI+KF +LN+KL+ I I
Sbjct: 487 EGTFKSGSELDFYIDDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKNINI 539

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Drosophila yakuba (taxid: 7245)

>sp|B3NH71|EIF3L_DROER Eukaryotic translation initiation factor 3 subunit L OS=Drosophila erecta GN=GG13851 PE=3 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/53 (67%), Positives = 45/53 (84%), Gaps = 2/53 (3%)

Query: 10  EGTLTA--MLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           EGT  +   LDFYID++MIHIADTKV+HRYGDFF+RKI+KF +LN+KL+ I I
Sbjct: 487 EGTFKSGSELDFYIDDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKNINI 539

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Drosophila erecta (taxid: 7220)

>sp|B3M7W0|EIF3L_DROAN Eukaryotic translation initiation factor 3 subunit L OS=Drosophila ananassae GN=GF25000 PE=3 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/44 (75%), Positives = 41/44 (93%)

Query: 17  LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           LDFYID++MIHIADTKV+HRYGDFF+RKI+KF +LN+KL+ I I
Sbjct: 496 LDFYIDDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKKITI 539

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Drosophila ananassae (taxid: 7217)

>sp|B4MX71|EIF3L_DROWI Eukaryotic translation initiation factor 3 subunit L OS=Drosophila willistoni GN=GK20774 PE=3 SV=1

 Score = 77.4 bits (189), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/44 (72%), Positives = 41/44 (93%)

Query: 17  LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           LDFYID++MIHIADTKV+HRYGDFF+RKI+KF +LN+KL+ + I
Sbjct: 496 LDFYIDDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKGVNI 539

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Drosophila willistoni (taxid: 7260)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	60
308512711	533	eukaryotic translation initiation factor	0.733	0.082	0.863	3e-15
389608829	542	eukaryotic translation initiation factor	0.733	0.081	0.863	3e-15
239792100	303	ACYPI001686 [Acyrthosiphon pisum]	0.733	0.145	0.840	8e-15
357606256	592	putative eukaryotic translation initiati	0.733	0.074	0.840	9e-15
332376454	548	unknown [Dendroctonus ponderosae]	0.733	0.080	0.863	1e-14
340720774	538	PREDICTED: eukaryotic translation initia	0.733	0.081	0.863	1e-14
66540009	538	PREDICTED: eukaryotic translation initia	0.733	0.081	0.863	1e-14
383864481	538	PREDICTED: eukaryotic translation initia	0.733	0.081	0.863	1e-14
332030226	530	Eukaryotic translation initiation factor	0.733	0.083	0.863	2e-14
307197884	535	Eukaryotic translation initiation factor	0.733	0.082	0.863	2e-14

>gi|308512711|gb|ADO33009.1| eukaryotic translation initiation factor 3 subunit L [Biston betularia]

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/44 (86%), Positives = 42/44 (95%)

Query: 17  LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           LDFYIDN+MIHIADTKVAHRYGDFFIRK++KFEELN+KL  IKI
Sbjct: 490 LDFYIDNDMIHIADTKVAHRYGDFFIRKLLKFEELNRKLHHIKI 533

Source: Biston betularia

Species: Biston betularia

Genus: Biston

Family: Geometridae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389608829|dbj|BAM18026.1| eukaryotic translation initiation factor 3 subunit L [Papilio xuthus]

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/44 (86%), Positives = 42/44 (95%)

Query: 17  LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           LDFYIDN+MIHIADTKVAHRYGDFFIRK++KFEELN+KL  IKI
Sbjct: 499 LDFYIDNDMIHIADTKVAHRYGDFFIRKLLKFEELNRKLHHIKI 542

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|239792100|dbj|BAH72430.1| ACYPI001686 [Acyrthosiphon pisum]

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 37/44 (84%), Positives = 43/44 (97%)

Query: 17  LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           LDFYID +MIHIADTKVAHRYGDFFIRK++KFEELN+KL+AIK+
Sbjct: 260 LDFYIDRDMIHIADTKVAHRYGDFFIRKVLKFEELNRKLKAIKV 303

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357606256|gb|EHJ64982.1| putative eukaryotic translation initiation factor 3 [Danaus plexippus]

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 37/44 (84%), Positives = 42/44 (95%)

Query: 17  LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           LDF+IDN+MIHIADTKVAHRYGDFFIRK++KFEELN+KL  IKI
Sbjct: 549 LDFFIDNDMIHIADTKVAHRYGDFFIRKLLKFEELNRKLHHIKI 592

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332376454|gb|AEE63367.1| unknown [Dendroctonus ponderosae]

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/44 (86%), Positives = 42/44 (95%)

Query: 17  LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           LDFYIDNEMIHIADTKVAHRYGDFFIRKI+KFE+LN+KL  IK+
Sbjct: 505 LDFYIDNEMIHIADTKVAHRYGDFFIRKILKFEDLNRKLHMIKM 548

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340720774|ref|XP_003398805.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like [Bombus terrestris] gi|350398064|ref|XP_003485076.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like [Bombus impatiens]

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/44 (86%), Positives = 42/44 (95%)

Query: 17  LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           LDFYID++MIHIADTKVAHRYGDFFIRKI+KFEELN+KL  IKI
Sbjct: 495 LDFYIDHDMIHIADTKVAHRYGDFFIRKILKFEELNRKLHHIKI 538

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66540009|ref|XP_624438.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like [Apis mellifera] gi|380028992|ref|XP_003698167.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like [Apis florea]

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/44 (86%), Positives = 42/44 (95%)

Query: 17  LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           LDFYID++MIHIADTKVAHRYGDFFIRKI+KFEELN+KL  IKI
Sbjct: 495 LDFYIDHDMIHIADTKVAHRYGDFFIRKILKFEELNRKLHHIKI 538

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864481|ref|XP_003707707.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like [Megachile rotundata]

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/44 (86%), Positives = 42/44 (95%)

Query: 17  LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           LDFYID++MIHIADTKVAHRYGDFFIRKI+KFEELN+KL  IKI
Sbjct: 495 LDFYIDHDMIHIADTKVAHRYGDFFIRKILKFEELNRKLHHIKI 538

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332030226|gb|EGI70009.1| Eukaryotic translation initiation factor 3 subunit L [Acromyrmex echinatior]

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/44 (86%), Positives = 42/44 (95%)

Query: 17  LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           LDFYID++MIHIADTKVAHRYGDFFIRKI+KFEELN+KL  IKI
Sbjct: 487 LDFYIDHDMIHIADTKVAHRYGDFFIRKILKFEELNRKLHHIKI 530

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307197884|gb|EFN78983.1| Eukaryotic translation initiation factor 3 subunit E-interacting protein [Harpegnathos saltator]

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/44 (86%), Positives = 42/44 (95%)

Query: 17  LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
           LDFYID++MIHIADTKVAHRYGDFFIRKI+KFEELN+KL  IKI
Sbjct: 492 LDFYIDHDMIHIADTKVAHRYGDFFIRKILKFEELNRKLHHIKI 535

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	60
FB|FBgn0036258	539	CG5642 [Drosophila melanogaste	0.883	0.098	0.678	4.6e-14
UNIPROTKB|Q6P878	562	eif3l "Eukaryotic translation	0.666	0.071	0.8	1.2e-11
UNIPROTKB|Q8AVJ0	562	eif3l "Eukaryotic translation	0.666	0.071	0.8	1.2e-11
UNIPROTKB|B0QY90	466	EIF3L "Eukaryotic translation	0.666	0.085	0.775	1.8e-11
ZFIN|ZDB-GENE-040426-2138	576	eif3s6ip "eukaryotic translati	0.733	0.076	0.704	2e-11
UNIPROTKB|Q5F428	564	EIF3L "Eukaryotic translation	0.666	0.070	0.775	2.5e-11
UNIPROTKB|Q3ZCK1	564	EIF3L "Eukaryotic translation	0.666	0.070	0.775	2.5e-11
UNIPROTKB|F1PHR6	564	EIF3L "Uncharacterized protein	0.666	0.070	0.775	2.5e-11
UNIPROTKB|Q9Y262	564	EIF3L "Eukaryotic translation	0.666	0.070	0.775	2.5e-11
UNIPROTKB|F1SKN5	564	EIF3L "Uncharacterized protein	0.666	0.070	0.775	2.5e-11

FB|FBgn0036258 CG5642 [Drosophila melanogaster (taxid:7227)]

 Score = 190 (71.9 bits), Expect = 4.6e-14, P = 4.6e-14
 Identities = 38/56 (67%), Positives = 47/56 (83%)

Query:     7 GLTEGTLTA--MLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
             GL EGT  +   LDFYID++MIHIADTKV+HRYGDFF+RKI+KF +LN+KL+ I I
Sbjct:   485 GL-EGTFKSGSELDFYIDDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKNINI 539

GO:0006413 "translational initiation" evidence=ISS

GO:0003743 "translation initiation factor activity" evidence=ISS

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=ISS

GO:0048812 "neuron projection morphogenesis" evidence=IMP

UNIPROTKB|Q6P878 eif3l "Eukaryotic translation initiation factor 3 subunit L" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 168 (64.2 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 32/40 (80%), Positives = 36/40 (90%)

Query:    17 LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQ 56
             +DFYID +MIHIADTKVA RYGDFFIR+I KFEELNK L+
Sbjct:   517 VDFYIDKDMIHIADTKVARRYGDFFIRQIHKFEELNKTLK 556

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=ISS

GO:0006413 "translational initiation" evidence=ISS

GO:0003743 "translation initiation factor activity" evidence=ISS

UNIPROTKB|Q8AVJ0 eif3l "Eukaryotic translation initiation factor 3 subunit L" [Xenopus laevis (taxid:8355)]

 Score = 168 (64.2 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 32/40 (80%), Positives = 36/40 (90%)

Query:    17 LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQ 56
             +DFYID +MIHIADTKVA RYGDFFIR+I KFEELNK L+
Sbjct:   517 VDFYIDKDMIHIADTKVARRYGDFFIRQIHKFEELNKTLK 556

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=ISS

GO:0006413 "translational initiation" evidence=ISS

GO:0003743 "translation initiation factor activity" evidence=ISS

UNIPROTKB|B0QY90 EIF3L "Eukaryotic translation initiation factor 3, subunit 6 interacting protein, isoform CRA_a" [Homo sapiens (taxid:9606)]

 Score = 165 (63.1 bits), Expect = 1.8e-11, P = 1.8e-11
 Identities = 31/40 (77%), Positives = 36/40 (90%)

Query:    17 LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQ 56
             +DFYID +MIHIADTKVA RYGDFFIR+I KFEELN+ L+
Sbjct:   421 VDFYIDKDMIHIADTKVARRYGDFFIRQIHKFEELNRTLK 460

GO:0003743 "translation initiation factor activity" evidence=IEA

ZFIN|ZDB-GENE-040426-2138 eif3s6ip "eukaryotic translation initiation factor 3, subunit 6 interacting protein" [Danio rerio (taxid:7955)]

 Score = 166 (63.5 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 31/44 (70%), Positives = 38/44 (86%)

Query:    17 LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIKI 60
             +DFYID +MIHIADTKVA RYGDFFIR+I KFEELN+ L+ + +
Sbjct:   518 VDFYIDKDMIHIADTKVARRYGDFFIRQIHKFEELNRTLKKMPL 561

GO:0003743 "translation initiation factor activity" evidence=IEA;ISS

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=ISS

GO:0006413 "translational initiation" evidence=IEA;ISS

GO:0006412 "translation" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q5F428 EIF3L "Eukaryotic translation initiation factor 3 subunit L" [Gallus gallus (taxid:9031)]

 Score = 165 (63.1 bits), Expect = 2.5e-11, P = 2.5e-11
 Identities = 31/40 (77%), Positives = 36/40 (90%)

Query:    17 LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQ 56
             +DFYID +MIHIADTKVA RYGDFFIR+I KFEELN+ L+
Sbjct:   519 VDFYIDKDMIHIADTKVARRYGDFFIRQIHKFEELNRTLK 558

GO:0003743 "translation initiation factor activity" evidence=ISS

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=ISS

GO:0006413 "translational initiation" evidence=ISS

UNIPROTKB|Q3ZCK1 EIF3L "Eukaryotic translation initiation factor 3 subunit L" [Bos taurus (taxid:9913)]

 Score = 165 (63.1 bits), Expect = 2.5e-11, P = 2.5e-11
 Identities = 31/40 (77%), Positives = 36/40 (90%)

Query:    17 LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQ 56
             +DFYID +MIHIADTKVA RYGDFFIR+I KFEELN+ L+
Sbjct:   519 VDFYIDKDMIHIADTKVARRYGDFFIRQIHKFEELNRTLK 558

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=ISS

GO:0003743 "translation initiation factor activity" evidence=ISS

GO:0006413 "translational initiation" evidence=ISS

GO:0005654 "nucleoplasm" evidence=IEA

GO:0001650 "fibrillar center" evidence=IEA

UNIPROTKB|F1PHR6 EIF3L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 165 (63.1 bits), Expect = 2.5e-11, P = 2.5e-11
 Identities = 31/40 (77%), Positives = 36/40 (90%)

Query:    17 LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQ 56
             +DFYID +MIHIADTKVA RYGDFFIR+I KFEELN+ L+
Sbjct:   519 VDFYIDKDMIHIADTKVARRYGDFFIRQIHKFEELNRTLK 558

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0003743 "translation initiation factor activity" evidence=IEA

GO:0001650 "fibrillar center" evidence=IEA

UNIPROTKB|Q9Y262 EIF3L "Eukaryotic translation initiation factor 3 subunit L" [Homo sapiens (taxid:9606)]

 Score = 165 (63.1 bits), Expect = 2.5e-11, P = 2.5e-11
 Identities = 31/40 (77%), Positives = 36/40 (90%)

Query:    17 LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQ 56
             +DFYID +MIHIADTKVA RYGDFFIR+I KFEELN+ L+
Sbjct:   519 VDFYIDKDMIHIADTKVARRYGDFFIRQIHKFEELNRTLK 558

GO:0001650 "fibrillar center" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0003743 "translation initiation factor activity" evidence=IC;IDA

GO:0006413 "translational initiation" evidence=IC;IDA

UNIPROTKB|F1SKN5 EIF3L "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 165 (63.1 bits), Expect = 2.5e-11, P = 2.5e-11
 Identities = 31/40 (77%), Positives = 36/40 (90%)

Query:    17 LDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQ 56
             +DFYID +MIHIADTKVA RYGDFFIR+I KFEELN+ L+
Sbjct:   519 VDFYIDKDMIHIADTKVARRYGDFFIRQIHKFEELNRTLK 558

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0003743 "translation initiation factor activity" evidence=IEA

GO:0001650 "fibrillar center" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5F428	EIF3L_CHICK	No assigned EC number	0.7380	0.7	0.0744	yes	N/A
A5A6M4	EIF3L_PANTR	No assigned EC number	0.7380	0.7	0.0744	yes	N/A
Q7Q5Y8	EIF3L_ANOGA	No assigned EC number	0.7906	0.7166	0.0797	yes	N/A
Q9VTU4	EIF3L_DROME	No assigned EC number	0.6792	0.85	0.0946	yes	N/A
Q2M0S3	EIF3L_DROPS	No assigned EC number	0.6792	0.85	0.0942	yes	N/A
Q7T2A5	EIF3L_DANRE	No assigned EC number	0.7045	0.7333	0.0763	yes	N/A
Q8QZY1	EIF3L_MOUSE	No assigned EC number	0.7380	0.7	0.0744	yes	N/A
Q3ZCK1	EIF3L_BOVIN	No assigned EC number	0.7380	0.7	0.0744	yes	N/A
Q6P878	EIF3L_XENTR	No assigned EC number	0.7619	0.7	0.0747	yes	N/A
Q9Y262	EIF3L_HUMAN	No assigned EC number	0.7380	0.7	0.0744	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	60
pfam10255	402	pfam10255, Paf67, RNA polymerase I-associated fact	4e-12

>gnl|CDD|220655 pfam10255, Paf67, RNA polymerase I-associated factor PAF67

 Score = 58.1 bits (141), Expect = 4e-12
 Identities = 23/36 (63%), Positives = 29/36 (80%)

Query: 14  TAMLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFE 49
           ++ LDFYID +MIHI +TKV  RYGDFFIR+I K +
Sbjct: 367 SSDLDFYIDGDMIHIKETKVQKRYGDFFIRQINKCK 402

RNA polymerase I is a multisubunit enzyme and its transcription competence is dependent on the presence of PAF67. This family of proteins is conserved from worms to humans. Length = 402

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	60
PF10255	404	Paf67: RNA polymerase I-associated factor PAF67; I	99.76
KOG3677|consensus	525		99.48

>PF10255 Paf67: RNA polymerase I-associated factor PAF67; InterPro: IPR019382 RNA polymerase I is a multi-subunit enzyme and its transcription competence is dependent on the presence of PAF67 []

Probab=99.76  E-value=2.9e-19  Score=132.01  Aligned_cols=48  Identities=63%  Similarity=1.036  Sum_probs=46.1

Q ss_pred             ccccC-cccCCee--ecceeEEeeCCEEEEeeccchhhhhhHHHHHHHHHH
Q psy16397          2 RVKNQ-GLTEGTL--TAMLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFE   49 (60)
Q Consensus         2 r~~~g-~LleG~~--~sDldF~id~dmIhI~e~k~~rry~d~Flr~i~K~~   49 (60)
                      +|+.| |+|+|+.  ++|+|||||+|||||+|+|++|||+|||+|||+|++
T Consensus       354 ~w~~g~sll~G~~~~~~dlDf~Id~D~IhI~e~k~~r~~~d~F~r~i~k~e  404 (404)
T PF10255_consen  354 RWSGGASLLDGEFQSSSDLDFYIDGDMIHIAETKVARRYGDFFIRQINKFE  404 (404)
T ss_pred             hccCCCcccccceeecCceEEEEeCCEEEEeeccccchhHHHHHHHHHhcC
Confidence            79999 9999996  799999999999999999999999999999999985

>KOG3677|consensus

Probab=99.48  E-value=1.3e-14  Score=109.70  Aligned_cols=57  Identities=54%  Similarity=0.860  Sum_probs=52.0

Q ss_pred             cccC-cccCCee--ecceeEEeeCCEEEEeeccchhhhhhHHHHHHHHHHHHHHHHhhcc
Q psy16397          3 VKNQ-GLTEGTL--TAMLDFYIDNEMIHIADTKVAHRYGDFFIRKIIKFEELNKKLQAIK   59 (60)
Q Consensus         3 ~~~g-~LleG~~--~sDldF~id~dmIhI~e~k~~rry~d~Flr~i~K~~~~~~~l~~~~   59 (60)
                      |+-| |-++|..  .+++|||||.|||||+++|+.|||||+|+|||+||+|+.+.|+.+.
T Consensus       464 ~~sg~s~~d~~f~~~s~idfyid~dmi~iaDtkv~r~~gd~fir~i~kf~El~~vLK~i~  523 (525)
T KOG3677|consen  464 WTSGPSDLDDAFFSRSEIDFYIDKDMIHIADTKVARRYGDIFIRQIHKFEELNRVLKLIT  523 (525)
T ss_pred             HhcCCccccccccCcceeeEEechhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            6666 6677774  8999999999999999999999999999999999999999998764

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00