Psyllid ID: psy16545
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 600 | 2.2.26 [Sep-21-2011] | |||||||
| Q8R059 | 347 | UDP-glucose 4-epimerase O | yes | N/A | 0.345 | 0.596 | 0.518 | 1e-57 | |
| Q5R8D0 | 348 | UDP-glucose 4-epimerase O | yes | N/A | 0.391 | 0.675 | 0.470 | 4e-57 | |
| Q9W0P5 | 350 | Probable UDP-glucose 4-ep | yes | N/A | 0.42 | 0.72 | 0.419 | 5e-57 | |
| Q14376 | 348 | UDP-glucose 4-epimerase O | yes | N/A | 0.391 | 0.675 | 0.466 | 2e-56 | |
| Q9T0A7 | 350 | UDP-glucose 4-epimerase 3 | yes | N/A | 0.306 | 0.525 | 0.510 | 4e-51 | |
| Q9SN58 | 351 | UDP-glucose 4-epimerase 2 | no | N/A | 0.293 | 0.501 | 0.538 | 7e-51 | |
| O65781 | 350 | UDP-glucose 4-epimerase G | N/A | N/A | 0.3 | 0.514 | 0.534 | 4e-50 | |
| P55180 | 339 | UDP-glucose 4-epimerase O | yes | N/A | 0.32 | 0.566 | 0.492 | 3e-47 | |
| Q553X7 | 344 | UDP-glucose 4-epimerase O | yes | N/A | 0.365 | 0.636 | 0.441 | 3e-47 | |
| Q9CNY5 | 338 | UDP-glucose 4-epimerase O | yes | N/A | 0.313 | 0.556 | 0.492 | 1e-46 |
| >sp|Q8R059|GALE_MOUSE UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/222 (51%), Positives = 146/222 (65%), Gaps = 15/222 (6%)
Query: 1 MINKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWS 60
+I+ F+N G+ S+ + LR + +TG+ V + E DI+ A L +K
Sbjct: 30 VIDNFHNAIRGE-DSMPESLRRVQELTGRSVEF-----EEMDILDQAALQHLFKK----- 78
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 120
H VIHFA +KAVGES+Q+PL YY+ NL TI LLE+M++HGV LVFSSS TV
Sbjct: 79 ----HSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAHGVKNLVFSSSATV 134
Query: 121 YGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSG 180
YG PQ+LP+ E HPTG N YGK+K FIEEM++DL +A WN + LRYFNP+GAH SG
Sbjct: 135 YGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCRADTAWNAVLLRYFNPIGAHASG 194
Query: 181 RIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
RIGEDP N+MPY++QVAIG + VFG DY TEDGTG
Sbjct: 195 RIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTG 236
|
Catalyzes two distinct but analogous reactions: the epimerization of UDP-glucose to UDP-galactose and the epimerization of UDP-N-acetylglucosamine to UDP-N-acetylgalactosamine. Mus musculus (taxid: 10090) EC: 5EC: .EC: 1EC: .EC: 3EC: .EC: 2 |
| >sp|Q5R8D0|GALE_PONAB UDP-glucose 4-epimerase OS=Pongo abelii GN=GALE PE=2 SV=1 | Back alignment and function description |
|---|
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 120/255 (47%), Positives = 162/255 (63%), Gaps = 20/255 (7%)
Query: 1 MINKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWS 60
+I+ F+N G G S+ + LR + +TG+ V + E DI+ A L +K
Sbjct: 31 VIDNFHNAFRG-GGSLPESLRRVQELTGRSVEF-----EEMDILDQGALQRLFKK----- 79
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 120
H VIHFA +KAVGES+Q+PL YY+ NL TI LLE+MK+HGV LVFSSS TV
Sbjct: 80 ----HSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATV 135
Query: 121 YGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSG 180
YG PQ+LP+ E HPTG N YGK+K FIEEM++DL +A K WN + LRYFNP GAH SG
Sbjct: 136 YGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASG 195
Query: 181 RIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVHIGDTP 240
IGEDP N+MPY++QVAIG + VFG DY+TEDGTG + ++++ V +
Sbjct: 196 CIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG----VRDYIHVVDLAKGH 251
Query: 241 -CSIRAIEQFTGKKV 254
++R +++ G ++
Sbjct: 252 IAALRKLKEQCGCRI 266
|
Catalyzes two distinct but analogous reactions: the epimerization of UDP-glucose to UDP-galactose and the epimerization of UDP-N-acetylglucosamine to UDP-N-acetylgalactosamine. Pongo abelii (taxid: 9601) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9W0P5|GALE_DROME Probable UDP-glucose 4-epimerase OS=Drosophila melanogaster GN=Gale PE=2 SV=1 | Back alignment and function description |
|---|
Score = 222 bits (566), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 170/303 (56%), Gaps = 51/303 (16%)
Query: 1 MINKFYNL--------GTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDL 52
M+N YN+ G + + L + +TGK V + D+
Sbjct: 23 MLNAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFY--------------RVDI 68
Query: 53 AQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQL 112
+E S H ID V HFAA+KAVGES + PL YY NN+ T LLE M + V++
Sbjct: 69 TDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNNVFKF 128
Query: 113 VFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFN 172
V+SSS TVYGEP+FLP+TE+HPTGN + YGKTK+F EE+LKDL K+ K W ++SLRYFN
Sbjct: 129 VYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVSLRYFN 188
Query: 173 PVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGT----------- 221
PVGAH SGRIGEDP N+MPY+AQVA+G +P +V+G+D+ T DGT
Sbjct: 189 PVGAHISGRIGEDPNGEPNNLMPYIAQVAVGRRPSLSVYGSDFPTHDGTGVRDYIHIVDL 248
Query: 222 --GKVVAIDNFVNSVHIG------------DTPCSIRAIEQFTGKKVDFYSCDLVDKNRL 267
G V A+D N G ++A E+ +GKKV++ LVD+ R
Sbjct: 249 AEGHVKALDKLRNIAETGFFAYNLGTGVGYSVLDMVKAFEKASGKKVNY---TLVDR-RS 304
Query: 268 GEI 270
G++
Sbjct: 305 GDV 307
|
Catalyzes two distinct but analogous reactions: the epimerization of UDP-glucose to UDP-galactose and the epimerization of UDP-N-acetylglucosamine to UDP-N-acetylgalactosamine. Drosophila melanogaster (taxid: 7227) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q14376|GALE_HUMAN UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE=1 SV=2 | Back alignment and function description |
|---|
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 162/255 (63%), Gaps = 20/255 (7%)
Query: 1 MINKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWS 60
+I+ F+N G G S+ + LR + +TG+ V + E DI+ A L +K
Sbjct: 31 VIDNFHNAFRG-GGSLPESLRRVQELTGRSVEF-----EEMDILDQGALQRLFKK----- 79
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 120
+ VIHFA +KAVGES+Q+PL YY+ NL TI LLE+MK+HGV LVFSSS TV
Sbjct: 80 ----YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATV 135
Query: 121 YGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSG 180
YG PQ+LP+ E HPTG N YGK+K FIEEM++DL +A K WN + LRYFNP GAH SG
Sbjct: 136 YGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASG 195
Query: 181 RIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVHIGDTP 240
IGEDP N+MPY++QVAIG + VFG DY+TEDGTG + ++++ V +
Sbjct: 196 CIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG----VRDYIHVVDLAKGH 251
Query: 241 -CSIRAIEQFTGKKV 254
++R +++ G ++
Sbjct: 252 IAALRKLKEQCGCRI 266
|
Catalyzes two distinct but analogous reactions: the epimerization of UDP-glucose to UDP-galactose and the epimerization of UDP-N-acetylglucosamine to UDP-N-acetylgalactosamine. Homo sapiens (taxid: 9606) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g23920 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 136/194 (70%), Gaps = 10/194 (5%)
Query: 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL 127
D VIHFA +KAVGES+++PL+YY NN++ T+ LLEVM +G LVFSSS TVYG P+ +
Sbjct: 80 DAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKNLVFSSSATVYGWPKEV 139
Query: 128 PITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPT 187
P TE+ P + N YG+TK FIEE+ +D+ ++ EW II LRYFNPVGAHPSG IGEDP
Sbjct: 140 PCTEESPI-SATNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGYIGEDPL 198
Query: 188 KSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVHIGDTPCSIRAIE 247
N+MPY+ QVA+G +PH TVFG DY+T+DGTG + ++++ + + D I A+
Sbjct: 199 GVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTG----VRDYIHVMDLADG--HIAALR 252
Query: 248 QFTGKKVDFYSCDL 261
+ K+ SC++
Sbjct: 253 KLDDLKI---SCEV 263
|
Arabidopsis thaliana (taxid: 3702) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=At4g10960 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 202 bits (513), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 98/182 (53%), Positives = 129/182 (70%), Gaps = 6/182 (3%)
Query: 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL 127
D VIHFA +KAVGES+++PL+YY NNL+ TI LLEVM HG LVFSSS TVYG P+ +
Sbjct: 81 DAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKNLVFSSSATVYGSPKEV 140
Query: 128 PITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPT 187
P TE+ P + N YG+TK FIEE+ +D+ + EW II LRYFNPVGAHPSG IGEDP
Sbjct: 141 PCTEEFPISAL-NPYGRTKLFIEEICRDVYGSDPEWKIILLRYFNPVGAHPSGDIGEDPR 199
Query: 188 KSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVHIGDTP-CSIRAI 246
N+MP++ QVA+G +PH TVFG DY T+DGTG + ++++ + + D ++R +
Sbjct: 200 GIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTG----VRDYIHVIDLADGHIAALRKL 255
Query: 247 EQ 248
E
Sbjct: 256 ED 257
|
Arabidopsis thaliana (taxid: 3702) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1 | Back alignment and function description |
|---|
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/187 (53%), Positives = 130/187 (69%), Gaps = 7/187 (3%)
Query: 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL 127
D VIHFA +KAVGES+Q+PL+YY NNLI TI L EVM +HG +LVFSSS TVYG P+ +
Sbjct: 81 DSVIHFAGLKAVGESVQKPLLYYDNNLIGTIVLFEVMAAHGCKKLVFSSSATVYGLPKEV 140
Query: 128 PITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPT 187
P TE+ P + N YG+TK IEE+ +D+ +A +EW II LRYFNPVGAHPSG IGEDP
Sbjct: 141 PCTEEFPL-SAANPYGRTKLIIEEICRDIYRAEQEWKIILLRYFNPVGAHPSGYIGEDPR 199
Query: 188 KSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVHIGDTPCSIRAIE 247
N+MP++ QVA+G +P TVFG DY T DGTG + ++++ V + D I A+
Sbjct: 200 GIPNNLMPFVQQVAVGRRPALTVFGNDYTTSDGTG----VRDYIHVVDLADG--HIAALR 253
Query: 248 QFTGKKV 254
+ K+
Sbjct: 254 KLNDPKI 260
|
Cyamopsis tetragonoloba (taxid: 3832) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|P55180|GALE_BACSU UDP-glucose 4-epimerase OS=Bacillus subtilis (strain 168) GN=galE PE=3 SV=1 | Back alignment and function description |
|---|
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 132/199 (66%), Gaps = 7/199 (3%)
Query: 50 TDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV 109
DL +E S ++I+ VIHFA +KAVGES+ PL YY NNL T L E M+ +GV
Sbjct: 57 ADLLDREAVDSVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFILCEAMEKYGV 116
Query: 110 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLR 169
++VFSSS TVYG P+ PITED P G N YG+TK +E++L+DL A EW++ LR
Sbjct: 117 KKIVFSSSATVYGVPETSPITEDFPLG-ATNPYGQTKLMLEQILRDLHTADNEWSVALLR 175
Query: 170 YFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDN 229
YFNP GAHPSGRIGEDP N+MPY+AQVA+G +VFG DY T+DGTG + +
Sbjct: 176 YFNPFGAHPSGRIGEDPNGIPNNLMPYVAQVAVGKLEQLSVFGNDYPTKDGTG----VRD 231
Query: 230 FVNSVHIGDTPCSIRAIEQ 248
+++ V + + ++A+E+
Sbjct: 232 YIHVVDLAEG--HVKALEK 248
|
Bacillus subtilis (strain 168) (taxid: 224308) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q553X7|GALE_DICDI UDP-glucose 4-epimerase OS=Dictyostelium discoideum GN=galE PE=1 SV=1 | Back alignment and function description |
|---|
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/240 (44%), Positives = 144/240 (60%), Gaps = 21/240 (8%)
Query: 14 TSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHF 73
S L+ ++ E +TGK + + DI++ A ++ + T +I VIHF
Sbjct: 40 NSSLEAIKRVESITGKEIEF-----HHVDIMNEKALDEIFE---------TGNIRSVIHF 85
Query: 74 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDH 133
A +KAVGES + PL YY NN+ T+ LL +M H V +LVFSSS TVYG+P +PITED
Sbjct: 86 AGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVKKLVFSSSATVYGDPHTVPITEDF 145
Query: 134 PTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNI 193
P + N YG+TK ++E +L+DL + EWN I LRYFNPVGAHPSG IGEDP N+
Sbjct: 146 PL-SATNPYGRTKLYVEGILQDLCASDPEWNCIMLRYFNPVGAHPSGLIGEDPKDIPNNL 204
Query: 194 MPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVHIGDTPCSIRAIEQFTGKK 253
MPY+ Q AIG +P ++FG DY T DGTG + +F++ V + I A+ KK
Sbjct: 205 MPYVTQTAIGKRPILSIFGNDYNTPDGTG----VRDFIHVVDLAKG--HISALSSLHSKK 258
|
Catalyzes two distinct but analogous reactions: the epimerization of UDP-glucose to UDP-galactose and the epimerization of UDP-N-acetylglucosamine to UDP-N-acetylgalactosamine. Dictyostelium discoideum (taxid: 44689) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9CNY5|GALE_PASMU UDP-glucose 4-epimerase OS=Pasteurella multocida (strain Pm70) GN=galE PE=3 SV=1 | Back alignment and function description |
|---|
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 134/205 (65%), Gaps = 17/205 (8%)
Query: 21 RTFERV---TGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVK 77
++ ERV TGK V + +GDI+ +T L QK + I VIHFA +K
Sbjct: 39 KSLERVAQITGKQVKF-----YQGDIL----DTALLQKIF-----AENQIQSVIHFAGLK 84
Query: 78 AVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137
AVGES+Q+P YY NN+ ++ L++ MK GV+ VFSSS TVYG+P+ +PITE G
Sbjct: 85 AVGESVQKPAEYYMNNVTGSLVLIQEMKKAGVWNFVFSSSATVYGDPEIIPITESCKVGG 144
Query: 138 IKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYL 197
N YG +K +E++LKD++KA E++I LRYFNPVGAH SG IGEDP N++PY+
Sbjct: 145 TTNPYGTSKFMVEQILKDIAKATPEFSITILRYFNPVGAHESGLIGEDPNGIPNNLLPYI 204
Query: 198 AQVAIGSKPHFTVFGADYETEDGTG 222
+QVAIG P +VFG+DYET DGTG
Sbjct: 205 SQVAIGKLPQLSVFGSDYETHDGTG 229
|
Pasteurella multocida (strain Pm70) (taxid: 272843) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 600 | ||||||
| 156539983 | 360 | PREDICTED: probable UDP-glucose 4-epimer | 0.341 | 0.569 | 0.617 | 2e-70 | |
| 340720162 | 364 | PREDICTED: probable UDP-glucose 4-epimer | 0.315 | 0.519 | 0.645 | 6e-70 | |
| 48105285 | 363 | PREDICTED: probable UDP-glucose 4-epimer | 0.341 | 0.564 | 0.615 | 2e-69 | |
| 380027263 | 363 | PREDICTED: probable UDP-glucose 4-epimer | 0.341 | 0.564 | 0.615 | 3e-69 | |
| 307197296 | 364 | UDP-glucose 4-epimerase [Harpegnathos sa | 0.315 | 0.519 | 0.645 | 1e-68 | |
| 383863089 | 364 | PREDICTED: probable UDP-glucose 4-epimer | 0.315 | 0.519 | 0.635 | 1e-68 | |
| 242017036 | 384 | UDP-glucose 4-epimerase, putative [Pedic | 0.343 | 0.536 | 0.601 | 4e-68 | |
| 332022429 | 364 | Putative UDP-glucose 4-epimerase [Acromy | 0.315 | 0.519 | 0.640 | 1e-67 | |
| 322796795 | 364 | hypothetical protein SINV_11980 [Solenop | 0.315 | 0.519 | 0.645 | 1e-67 | |
| 321477120 | 371 | hypothetical protein DAPPUDRAFT_305695 [ | 0.341 | 0.552 | 0.586 | 1e-66 |
| >gi|156539983|ref|XP_001602357.1| PREDICTED: probable UDP-glucose 4-epimerase-like isoform 1 [Nasonia vitripennis] gi|345496979|ref|XP_003427868.1| PREDICTED: probable UDP-glucose 4-epimerase-like isoform 2 [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/222 (61%), Positives = 162/222 (72%), Gaps = 17/222 (7%)
Query: 2 INKFYNLGT-GQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWS 60
I+ F N T G G S LR E++TGK V + + DL K+
Sbjct: 37 IDNFANSVTEGDGESAA--LRRVEKITGKTVKFYI--------------CDLLDKDKLEQ 80
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 120
H IDCV+HFAA+KAVGESMQ PL YY+NN+I INLLEVMK+ G +QLVFSSSCTV
Sbjct: 81 VFNKHKIDCVVHFAAIKAVGESMQIPLHYYRNNIIGAINLLEVMKAAGCFQLVFSSSCTV 140
Query: 121 YGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSG 180
YGEP+ LPITE HPTGNI NVYG+TK+FIEEMLKD+S+A ++WNIISLRYFNPVGAHPSG
Sbjct: 141 YGEPEKLPITEGHPTGNITNVYGRTKYFIEEMLKDISRAERKWNIISLRYFNPVGAHPSG 200
Query: 181 RIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
IGEDPTK FTN+MP++AQVA+G K T+FG DY T+DGTG
Sbjct: 201 LIGEDPTKQFTNLMPFIAQVALGQKSELTIFGGDYPTKDGTG 242
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340720162|ref|XP_003398512.1| PREDICTED: probable UDP-glucose 4-epimerase-like [Bombus terrestris] gi|350408358|ref|XP_003488377.1| PREDICTED: probable UDP-glucose 4-epimerase-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 153/203 (75%), Gaps = 14/203 (6%)
Query: 20 LRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAV 79
L+ E++TGK V + N DL ++ + H IDCVIHFAA+KAV
Sbjct: 52 LKRVEQITGKKVTFY--------------NCDLIDRDKLETVFKKHKIDCVIHFAAIKAV 97
Query: 80 GESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139
GESMQ PL YY+NN+I INLLEVMK+ G +QLVFSSSCTVYGEP LPITE+HPTGNI
Sbjct: 98 GESMQIPLHYYRNNIIGAINLLEVMKAAGCFQLVFSSSCTVYGEPNVLPITEEHPTGNIT 157
Query: 140 NVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQ 199
NVYG+TK+FIEEMLKD+S+A K WNIISLRYFNPVGAH SG IGEDPTKSFTN+MPY+AQ
Sbjct: 158 NVYGRTKYFIEEMLKDISRAEKNWNIISLRYFNPVGAHQSGLIGEDPTKSFTNLMPYIAQ 217
Query: 200 VAIGSKPHFTVFGADYETEDGTG 222
VA+ KP +FG DY T+DGTG
Sbjct: 218 VALRHKPELIIFGGDYPTKDGTG 240
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|48105285|ref|XP_393006.1| PREDICTED: probable UDP-glucose 4-epimerase-like [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 158/221 (71%), Gaps = 16/221 (7%)
Query: 2 INKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61
I+ F N T G S L+ E++TGK V + N DL ++
Sbjct: 35 IDNFANSVTESGESAA--LKRVEQITGKKVTFY--------------NCDLIDRDKLEIV 78
Query: 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 121
H IDCVIHFAA+KAVGESMQ PL YY+NN+I INLLEVMK+ G +QLVFSSSCTVY
Sbjct: 79 FNKHKIDCVIHFAAIKAVGESMQIPLHYYRNNIIGAINLLEVMKAAGCFQLVFSSSCTVY 138
Query: 122 GEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGR 181
GEP LPITE+HPTGNI NVYG+TK+FIEEMLKD+S+A K WNIISLRYFNPVGAH SG
Sbjct: 139 GEPNQLPITEEHPTGNITNVYGRTKYFIEEMLKDISRAEKNWNIISLRYFNPVGAHQSGL 198
Query: 182 IGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
IGEDPTK FTN+MPY+AQVA+ KP +FG DY T+DGTG
Sbjct: 199 IGEDPTKPFTNLMPYIAQVALRHKPELVIFGGDYPTKDGTG 239
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380027263|ref|XP_003697348.1| PREDICTED: probable UDP-glucose 4-epimerase-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 158/221 (71%), Gaps = 16/221 (7%)
Query: 2 INKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61
I+ F N T G S L+ E++TGK V + N DL ++
Sbjct: 35 IDNFANSVTESGESAA--LKRVEQITGKKVTFY--------------NCDLIDRDKLEIV 78
Query: 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 121
H IDCVIHFAA+KAVGESMQ PL YY+NN+I INLLEVMK+ G +QLVFSSSCTVY
Sbjct: 79 FNKHKIDCVIHFAAIKAVGESMQIPLHYYRNNIIGAINLLEVMKAAGCFQLVFSSSCTVY 138
Query: 122 GEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGR 181
GEP LPITE+HPTGNI NVYG+TK+FIEEMLKD+S+A K WNIISLRYFNPVGAH SG
Sbjct: 139 GEPNQLPITEEHPTGNITNVYGRTKYFIEEMLKDISRAEKNWNIISLRYFNPVGAHQSGL 198
Query: 182 IGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
IGEDPTK FTN+MPY+AQVA+ KP +FG DY T+DGTG
Sbjct: 199 IGEDPTKPFTNLMPYIAQVALRHKPELIIFGGDYPTKDGTG 239
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307197296|gb|EFN78588.1| UDP-glucose 4-epimerase [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 151/203 (74%), Gaps = 14/203 (6%)
Query: 20 LRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAV 79
L+ E++TGK V + N DL +E S H IDCVIHFAA+KAV
Sbjct: 52 LKRVEQITGKKVTFY--------------NCDLLDREKLESIFNKHKIDCVIHFAAIKAV 97
Query: 80 GESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139
GESMQ PL YY+NN+I INLLEVMK+ G +QLVFSSSCTVYGEP LPITE+H TGNI
Sbjct: 98 GESMQVPLHYYRNNIIGAINLLEVMKAAGCFQLVFSSSCTVYGEPTELPITENHETGNIT 157
Query: 140 NVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQ 199
NVYG+TK+FIEEMLKD+S+A K WNIISLRYFNPVGAH SG IGEDPTK FTN+MPY+AQ
Sbjct: 158 NVYGRTKYFIEEMLKDISRAEKSWNIISLRYFNPVGAHSSGLIGEDPTKPFTNLMPYIAQ 217
Query: 200 VAIGSKPHFTVFGADYETEDGTG 222
VA+ KP +FG DY T+DGTG
Sbjct: 218 VALRHKPELIIFGGDYPTKDGTG 240
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383863089|ref|XP_003707015.1| PREDICTED: probable UDP-glucose 4-epimerase-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/203 (63%), Positives = 152/203 (74%), Gaps = 14/203 (6%)
Query: 20 LRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAV 79
L+ E++TGK V + N DL ++ + H IDCVIHFAA+KAV
Sbjct: 52 LKRVEQITGKKVTFY--------------NCDLIDRDKLETVFNKHKIDCVIHFAAIKAV 97
Query: 80 GESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139
GESMQ PL YY+NN+I INLLEVMK+ G +QLVFSSSCTVYGEP LPITE+HPTGNI
Sbjct: 98 GESMQVPLHYYRNNIIGAINLLEVMKAAGCFQLVFSSSCTVYGEPNELPITEEHPTGNIT 157
Query: 140 NVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQ 199
NVYG+TK+FIEEMLKD+S+A K WNIISLRYFNPVGAHPSG IGEDPTK FTN+MPY+AQ
Sbjct: 158 NVYGRTKYFIEEMLKDISRAEKNWNIISLRYFNPVGAHPSGLIGEDPTKPFTNLMPYIAQ 217
Query: 200 VAIGSKPHFTVFGADYETEDGTG 222
VA+ K +FG +Y T+DGTG
Sbjct: 218 VALRHKSELVIFGGNYPTKDGTG 240
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242017036|ref|XP_002428999.1| UDP-glucose 4-epimerase, putative [Pediculus humanus corporis] gi|212513845|gb|EEB16261.1| UDP-glucose 4-epimerase, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/221 (60%), Positives = 159/221 (71%), Gaps = 15/221 (6%)
Query: 2 INKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61
I+ F N T Q L R E +T KP+ + + D++ + A ++ +
Sbjct: 34 IDNFANSVTTQDGQAPSLQRV-EMITKKPIKFY-----KCDLLDLPALDNVFR------- 80
Query: 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 121
HDIDCVIHFAA+KAVGESMQ PL+Y+KNNL+ TINLLE MK H YQLVFSSSCT+Y
Sbjct: 81 --MHDIDCVIHFAAMKAVGESMQNPLLYHKNNLVGTINLLETMKKHACYQLVFSSSCTIY 138
Query: 122 GEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGR 181
G P+ LPITE+H G++ NVYGKTK+FIEEMLKD+S A K WNIISLRYFNPVGAHPSG
Sbjct: 139 GNPEELPITEEHKIGDVTNVYGKTKYFIEEMLKDISAADKNWNIISLRYFNPVGAHPSGL 198
Query: 182 IGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
IGEDPTK FTN+MP++AQVAIG P VFG DY+T DGTG
Sbjct: 199 IGEDPTKPFTNLMPFMAQVAIGKLPILHVFGGDYDTVDGTG 239
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332022429|gb|EGI62737.1| Putative UDP-glucose 4-epimerase [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 149/203 (73%), Gaps = 14/203 (6%)
Query: 20 LRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAV 79
L+ E++TGK V + N DL KE + H IDCVIHFAA+KAV
Sbjct: 52 LKRVEQITGKKVTFY--------------NCDLLDKEKLETVFNQHKIDCVIHFAAIKAV 97
Query: 80 GESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139
GESMQ PL YY+NN+I INLLEVMK+ G +QLVFSSSCTVYGEP LPITE+H TGNI
Sbjct: 98 GESMQVPLHYYRNNMIGAINLLEVMKAAGCFQLVFSSSCTVYGEPTELPITEEHETGNIT 157
Query: 140 NVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQ 199
NVYG+TK+FIEEMLKD+S+A K WNIISLRYFNPVGAH SG IGEDPTK FTN+MPY+AQ
Sbjct: 158 NVYGRTKYFIEEMLKDISRAEKNWNIISLRYFNPVGAHRSGLIGEDPTKPFTNLMPYIAQ 217
Query: 200 VAIGSKPHFTVFGADYETEDGTG 222
VA+ K +FG DY T DGTG
Sbjct: 218 VALRHKSELIIFGGDYPTNDGTG 240
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322796795|gb|EFZ19222.1| hypothetical protein SINV_11980 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 149/203 (73%), Gaps = 14/203 (6%)
Query: 20 LRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAV 79
L+ E++TGK V + N DL KE + H IDCVIHFAA+KAV
Sbjct: 52 LKRVEQITGKKVTFY--------------NCDLLNKEKLETVFNQHKIDCVIHFAAIKAV 97
Query: 80 GESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139
GESMQ PL YY+NN+I INLLEVMK+ G +QLVFSSSCTVYGEP LPITE+H TGNI
Sbjct: 98 GESMQVPLHYYRNNIIGAINLLEVMKAAGCFQLVFSSSCTVYGEPTKLPITEEHETGNIT 157
Query: 140 NVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQ 199
NVYG+TK+FIEEMLKD+S+A K WNIISLRYFNPVGAH SG IGEDPTK FTN+MPY+AQ
Sbjct: 158 NVYGRTKYFIEEMLKDISRAEKSWNIISLRYFNPVGAHRSGLIGEDPTKPFTNLMPYIAQ 217
Query: 200 VAIGSKPHFTVFGADYETEDGTG 222
VA K +FG DY TEDGTG
Sbjct: 218 VASRLKSELIIFGGDYPTEDGTG 240
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|321477120|gb|EFX88079.1| hypothetical protein DAPPUDRAFT_305695 [Daphnia pulex] | Back alignment and taxonomy information |
|---|
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 129/220 (58%), Positives = 154/220 (70%), Gaps = 15/220 (6%)
Query: 3 NKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62
+ F N G+ + L R E +TGK V + DL E
Sbjct: 35 DNFANSVNGEKGTAPSLERV-EEITGKKVTFY--------------QCDLLDYERLNKIF 79
Query: 63 CTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 122
H IDCVIHFAA+KAVGESM+ PL+YYKNN++ TINLLEVMK+H YQLVFSSSC VYG
Sbjct: 80 SQHKIDCVIHFAAMKAVGESMEVPLLYYKNNVVGTINLLEVMKAHECYQLVFSSSCCVYG 139
Query: 123 EPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRI 182
P+ LPITED P GN+ NVYG+TK+ IEEML DLS++ + WNI SLRYFNPVGAHPSGRI
Sbjct: 140 NPERLPITEDSPIGNVTNVYGRTKYLIEEMLMDLSRSDERWNICSLRYFNPVGAHPSGRI 199
Query: 183 GEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
GEDPTK ++N+MPY+AQVA+G+KP T+FG DY T DGTG
Sbjct: 200 GEDPTKPYSNLMPYIAQVALGNKPSLTIFGDDYNTLDGTG 239
|
Source: Daphnia pulex Species: Daphnia pulex Genus: Daphnia Family: Daphniidae Order: Diplostraca Class: Branchiopoda Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 600 | ||||||
| UNIPROTKB|I3LL84 | 348 | GALE "Uncharacterized protein" | 0.345 | 0.594 | 0.527 | 6.8e-71 | |
| MGI|MGI:1921496 | 347 | Gale "galactose-4-epimerase, U | 0.345 | 0.596 | 0.518 | 1.8e-70 | |
| UNIPROTKB|Q3T105 | 348 | GALE "Uncharacterized protein" | 0.345 | 0.594 | 0.522 | 1.8e-70 | |
| UNIPROTKB|Q4QRB0 | 348 | Gale "Gale protein" [Rattus no | 0.345 | 0.594 | 0.518 | 2.3e-70 | |
| UNIPROTKB|Q14376 | 348 | GALE "UDP-glucose 4-epimerase" | 0.345 | 0.594 | 0.522 | 2.3e-70 | |
| UNIPROTKB|F1PI88 | 348 | GALE "Uncharacterized protein" | 0.345 | 0.594 | 0.513 | 1.6e-69 | |
| ZFIN|ZDB-GENE-060421-6479 | 350 | gale "UDP-galactose-4-epimeras | 0.31 | 0.531 | 0.549 | 2.6e-67 | |
| UNIPROTKB|F1NWE5 | 351 | GALE "Uncharacterized protein" | 0.298 | 0.509 | 0.559 | 4.8e-66 | |
| TAIR|locus:2138121 | 350 | UGE2 "UDP-D-glucose/UDP-D-gala | 0.306 | 0.525 | 0.510 | 1.4e-64 | |
| TAIR|locus:2123466 | 351 | UGE5 "UDP-D-glucose/UDP-D-gala | 0.291 | 0.498 | 0.541 | 4.8e-64 |
| UNIPROTKB|I3LL84 GALE "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 551 (199.0 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 117/222 (52%), Positives = 149/222 (67%)
Query: 1 MINKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWS 60
+I+ F+N G G+S+ + LR + +TG+ V + E DI+ A L +K
Sbjct: 31 VIDNFHNAIRG-GSSMPESLRRVQELTGRSVEF-----EEMDILDQAALQRLFKKY---- 80
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 120
H + VIHFA +KAVGES+Q+PL YY+ NL TI LLE+MK+HGV LVFSSS TV
Sbjct: 81 ----HFV-AVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATV 135
Query: 121 YGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSG 180
YG PQ+LP+ E HPTG N YGK+K FIEEM++DL +A K WN + LRYFNP+GAH SG
Sbjct: 136 YGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKAWNAVLLRYFNPIGAHASG 195
Query: 181 RIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
IGEDP N+MPY++QVAIG + VFG DY+TEDGTG
Sbjct: 196 CIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237
|
|
| MGI|MGI:1921496 Gale "galactose-4-epimerase, UDP" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 551 (199.0 bits), Expect = 1.8e-70, Sum P(2) = 1.8e-70
Identities = 115/222 (51%), Positives = 146/222 (65%)
Query: 1 MINKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWS 60
+I+ F+N G+ S+ + LR + +TG+ V + E DI+ A L +K
Sbjct: 30 VIDNFHNAIRGED-SMPESLRRVQELTGRSVEF-----EEMDILDQAALQHLFKK----- 78
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 120
H VIHFA +KAVGES+Q+PL YY+ NL TI LLE+M++HGV LVFSSS TV
Sbjct: 79 ----HSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAHGVKNLVFSSSATV 134
Query: 121 YGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSG 180
YG PQ+LP+ E HPTG N YGK+K FIEEM++DL +A WN + LRYFNP+GAH SG
Sbjct: 135 YGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCRADTAWNAVLLRYFNPIGAHASG 194
Query: 181 RIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
RIGEDP N+MPY++QVAIG + VFG DY TEDGTG
Sbjct: 195 RIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTG 236
|
|
| UNIPROTKB|Q3T105 GALE "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 548 (198.0 bits), Expect = 1.8e-70, Sum P(2) = 1.8e-70
Identities = 116/222 (52%), Positives = 147/222 (66%)
Query: 1 MINKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWS 60
+I+ F+N G G S+ + LR + +TG+ V + E DI+ A L +K
Sbjct: 31 VIDNFHNAIRGGG-SMPESLRRVQDLTGRSVEF-----EEMDILDQAALQRLFKK----- 79
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 120
H VIHFA +KAVGES+Q+PL YY+ NL TI LLE+M++HGV LVFSSS TV
Sbjct: 80 ----HSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAHGVKNLVFSSSATV 135
Query: 121 YGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSG 180
YG PQ+LP+ E HPTG N YGK+K FIEEM++DL +A K WN + LRYFNP+GAH SG
Sbjct: 136 YGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKAWNAVLLRYFNPIGAHASG 195
Query: 181 RIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
IGEDP N+MPY++QVAIG + VFG DY+TEDGTG
Sbjct: 196 CIGEDPQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTG 237
|
|
| UNIPROTKB|Q4QRB0 Gale "Gale protein" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 550 (198.7 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 115/222 (51%), Positives = 147/222 (66%)
Query: 1 MINKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWS 60
+I+ F+N G+ S+ + LR + +TG+ V + E DI+ A L +K
Sbjct: 31 VIDNFHNSIRGED-SMPESLRRVQELTGRSVEF-----EEMDILDQAALQHLFKK----- 79
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 120
H+ VIHFA +KAVGES+Q+PL YY+ NL TI LLE+M++HGV LVFSSS TV
Sbjct: 80 ----HNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAHGVKSLVFSSSATV 135
Query: 121 YGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSG 180
YG PQ+LP+ E HPTG N YGK+K FIEEM++DL +A WN + LRYFNP+GAH SG
Sbjct: 136 YGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIQDLCRADTAWNAVLLRYFNPIGAHASG 195
Query: 181 RIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
RIGEDP N+MPY++QVAIG + VFG DY TEDGTG
Sbjct: 196 RIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTG 237
|
|
| UNIPROTKB|Q14376 GALE "UDP-glucose 4-epimerase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 545 (196.9 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 116/222 (52%), Positives = 146/222 (65%)
Query: 1 MINKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWS 60
+I+ F+N G G S+ + LR + +TG+ V + E DI+ A L +K
Sbjct: 31 VIDNFHNAFRGGG-SLPESLRRVQELTGRSVEF-----EEMDILDQGALQRLFKK----- 79
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 120
+ VIHFA +KAVGES+Q+PL YY+ NL TI LLE+MK+HGV LVFSSS TV
Sbjct: 80 ----YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATV 135
Query: 121 YGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSG 180
YG PQ+LP+ E HPTG N YGK+K FIEEM++DL +A K WN + LRYFNP GAH SG
Sbjct: 136 YGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASG 195
Query: 181 RIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
IGEDP N+MPY++QVAIG + VFG DY+TEDGTG
Sbjct: 196 CIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237
|
|
| UNIPROTKB|F1PI88 GALE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 551 (199.0 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 114/222 (51%), Positives = 149/222 (67%)
Query: 1 MINKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWS 60
+I+ F+N G+G S+ + L+ + +TG+ V + E DI+ A L +K
Sbjct: 31 VIDNFHNAIRGKG-SMPESLQRVQELTGRSVEF-----EEMDILDQAALQRLFEK----- 79
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 120
H VIHFA +KAVGES+Q+PL YY+ NL +I LLE+M++HGV LVFSSS TV
Sbjct: 80 ----HSFTAVIHFAGLKAVGESVQKPLDYYRVNLTGSIQLLEIMRAHGVKNLVFSSSATV 135
Query: 121 YGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSG 180
YG PQ+LP+ E HPTG N YGK+K+FIEEM++DL +A K WN + LRYFNP+GAH SG
Sbjct: 136 YGNPQYLPLDEAHPTGGCTNPYGKSKYFIEEMIRDLCQADKAWNAVLLRYFNPIGAHASG 195
Query: 181 RIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
IGEDP N+MPY++QVAIG + VFG DY+TEDGTG
Sbjct: 196 CIGEDPQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTG 237
|
|
| ZFIN|ZDB-GENE-060421-6479 gale "UDP-galactose-4-epimerase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 542 (195.9 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
Identities = 105/191 (54%), Positives = 134/191 (70%)
Query: 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP 124
H V+HFA +KAVGES+++PL YY+ NL TINLLEVM+SHGV LVFSSS TVYG+P
Sbjct: 80 HSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQSHGVRNLVFSSSATVYGDP 139
Query: 125 QFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGE 184
Q LPI E HP G N YGKTK+FIEEM++D A K+WN + LRYFNP+GAH SG+IGE
Sbjct: 140 QKLPIDEQHPVGGCTNPYGKTKYFIEEMIRDQCTAEKDWNAVLLRYFNPIGAHISGQIGE 199
Query: 185 DPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVHIGDTP-CSI 243
DP N++PY+AQVAIG + H VFG DY T DGTG + ++++ V + ++
Sbjct: 200 DPQGIPNNLLPYVAQVAIGRRKHLNVFGNDYSTPDGTG----VRDYIHVVDLAKGHIAAV 255
Query: 244 RAIEQFTGKKV 254
R ++ G KV
Sbjct: 256 RKLKDSCGCKV 266
|
|
| UNIPROTKB|F1NWE5 GALE "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 516 (186.7 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 104/186 (55%), Positives = 128/186 (68%)
Query: 44 VSMYANTDLAQKEL----GWSAR---CTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIA 96
V A T +A +EL G + R TH V+HFA +KAVGES++ PL YY NL
Sbjct: 56 VQRIAQTPIAFQELDITDGAALRKLFSTHRFSGVMHFAGLKAVGESVRRPLEYYNVNLTG 115
Query: 97 TINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDL 156
TI LLE M+++ V +VFSSS TVYG+PQ+LP+ E HP G N YGK+K+FIEEM++DL
Sbjct: 116 TIRLLEAMEAYSVRNIVFSSSATVYGDPQYLPLDEKHPVGGCTNPYGKSKYFIEEMIQDL 175
Query: 157 SKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYE 216
KA K WN I LRYFNP+GAH SG IGEDP N+MPY+AQVA+G + +VFG DYE
Sbjct: 176 CKAEKGWNAILLRYFNPIGAHESGMIGEDPQGIPNNLMPYVAQVAVGRQEFLSVFGNDYE 235
Query: 217 TEDGTG 222
T DGTG
Sbjct: 236 TADGTG 241
|
|
| TAIR|locus:2138121 UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 508 (183.9 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 99/194 (51%), Positives = 136/194 (70%)
Query: 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL 127
D VIHFA +KAVGES+++PL+YY NN++ T+ LLEVM +G LVFSSS TVYG P+ +
Sbjct: 80 DAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKNLVFSSSATVYGWPKEV 139
Query: 128 PITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPT 187
P TE+ P + N YG+TK FIEE+ +D+ ++ EW II LRYFNPVGAHPSG IGEDP
Sbjct: 140 PCTEESPI-SATNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGYIGEDPL 198
Query: 188 KSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVHIGDTPCSIRAIE 247
N+MPY+ QVA+G +PH TVFG DY+T+DGTG + ++++ + + D I A+
Sbjct: 199 GVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTG----VRDYIHVMDLADG--HIAALR 252
Query: 248 QFTGKKVDFYSCDL 261
+ K+ SC++
Sbjct: 253 KLDDLKI---SCEV 263
|
|
| TAIR|locus:2123466 UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 508 (183.9 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
Identities = 98/181 (54%), Positives = 129/181 (71%)
Query: 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL 127
D VIHFA +KAVGES+++PL+YY NNL+ TI LLEVM HG LVFSSS TVYG P+ +
Sbjct: 81 DAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKNLVFSSSATVYGSPKEV 140
Query: 128 PITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPT 187
P TE+ P + N YG+TK FIEE+ +D+ + EW II LRYFNPVGAHPSG IGEDP
Sbjct: 141 PCTEEFPISAL-NPYGRTKLFIEEICRDVYGSDPEWKIILLRYFNPVGAHPSGDIGEDPR 199
Query: 188 KSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVHIGDTP-CSIRAI 246
N+MP++ QVA+G +PH TVFG DY T+DGTG + ++++ + + D ++R +
Sbjct: 200 GIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTG----VRDYIHVIDLADGHIAALRKL 255
Query: 247 E 247
E
Sbjct: 256 E 256
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q57301 | GALE_YEREN | 5, ., 1, ., 3, ., 2 | 0.5345 | 0.2266 | 0.4047 | yes | N/A |
| Q9T0A7 | GALE3_ARATH | 5, ., 1, ., 3, ., 2 | 0.5103 | 0.3066 | 0.5257 | yes | N/A |
| Q8R059 | GALE_MOUSE | 5, ., 1, ., 3, ., 2 | 0.5180 | 0.345 | 0.5965 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 600 | |||
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 1e-85 | |
| PLN02240 | 352 | PLN02240, PLN02240, UDP-glucose 4-epimerase | 2e-83 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 6e-78 | |
| TIGR01179 | 328 | TIGR01179, galE, UDP-glucose-4-epimerase GalE | 2e-73 | |
| PRK10675 | 338 | PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro | 1e-64 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 4e-59 | |
| PLN02240 | 352 | PLN02240, PLN02240, UDP-glucose 4-epimerase | 7e-46 | |
| TIGR01179 | 328 | TIGR01179, galE, UDP-glucose-4-epimerase GalE | 9e-45 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 2e-42 | |
| PRK10675 | 338 | PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro | 7e-41 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 1e-30 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 5e-29 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 1e-23 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 2e-22 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 4e-22 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 2e-21 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 4e-21 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 1e-20 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 3e-20 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 8e-20 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 9e-20 | |
| PLN02240 | 352 | PLN02240, PLN02240, UDP-glucose 4-epimerase | 4e-19 | |
| PLN02240 | 352 | PLN02240, PLN02240, UDP-glucose 4-epimerase | 4e-19 | |
| cd05234 | 305 | cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, | 2e-18 | |
| pfam13950 | 62 | pfam13950, Epimerase_Csub, UDP-glucose 4-epimerase | 2e-17 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 5e-17 | |
| pfam13950 | 62 | pfam13950, Epimerase_Csub, UDP-glucose 4-epimerase | 5e-17 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 7e-16 | |
| cd05234 | 305 | cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, | 1e-15 | |
| cd05253 | 332 | cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera | 3e-15 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 5e-15 | |
| TIGR01179 | 328 | TIGR01179, galE, UDP-glucose-4-epimerase GalE | 2e-14 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 3e-14 | |
| TIGR01179 | 328 | TIGR01179, galE, UDP-glucose-4-epimerase GalE | 4e-14 | |
| cd05253 | 332 | cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera | 5e-14 | |
| cd05238 | 305 | cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n | 7e-13 | |
| PRK10675 | 338 | PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro | 2e-11 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 2e-11 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 3e-11 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 1e-10 | |
| TIGR04180 | 297 | TIGR04180, EDH_00030, NAD dependent epimerase/dehy | 1e-10 | |
| TIGR04180 | 297 | TIGR04180, EDH_00030, NAD dependent epimerase/dehy | 2e-10 | |
| cd05260 | 316 | cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase | 3e-10 | |
| cd05255 | 382 | cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synth | 1e-09 | |
| cd05258 | 337 | cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e | 1e-09 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 3e-09 | |
| PRK15181 | 348 | PRK15181, PRK15181, Vi polysaccharide biosynthesis | 3e-09 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 6e-09 | |
| cd05248 | 317 | cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto | 9e-09 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 1e-08 | |
| COG1088 | 340 | COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel | 2e-08 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 3e-08 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 3e-08 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 3e-08 | |
| pfam02719 | 280 | pfam02719, Polysacc_synt_2, Polysaccharide biosynt | 5e-08 | |
| TIGR01181 | 317 | TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd | 1e-07 | |
| TIGR02197 | 314 | TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep | 1e-07 | |
| PLN02240 | 352 | PLN02240, PLN02240, UDP-glucose 4-epimerase | 2e-07 | |
| PLN02240 | 352 | PLN02240, PLN02240, UDP-glucose 4-epimerase | 2e-07 | |
| PLN02240 | 352 | PLN02240, PLN02240, UDP-glucose 4-epimerase | 2e-07 | |
| cd05258 | 337 | cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e | 2e-07 | |
| COG1086 | 588 | COG1086, COG1086, Predicted nucleoside-diphosphate | 2e-07 | |
| cd05252 | 336 | cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata | 2e-07 | |
| cd05239 | 300 | cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte | 2e-07 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 4e-07 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 4e-07 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 6e-07 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 6e-07 | |
| cd05238 | 305 | cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n | 7e-07 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 7e-07 | |
| cd05260 | 316 | cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase | 9e-07 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 1e-06 | |
| cd08957 | 307 | cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic | 1e-06 | |
| cd05253 | 332 | cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera | 2e-06 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 3e-06 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 3e-06 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 3e-06 | |
| PLN02240 | 352 | PLN02240, PLN02240, UDP-glucose 4-epimerase | 6e-06 | |
| PLN02240 | 352 | PLN02240, PLN02240, UDP-glucose 4-epimerase | 6e-06 | |
| cd05272 | 308 | cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext | 8e-06 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 9e-06 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 9e-06 | |
| TIGR01179 | 328 | TIGR01179, galE, UDP-glucose-4-epimerase GalE | 1e-05 | |
| TIGR02622 | 349 | TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra | 1e-05 | |
| cd09813 | 335 | cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD | 1e-05 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 1e-05 | |
| cd05230 | 305 | cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase | 2e-05 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 2e-05 | |
| cd08957 | 307 | cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic | 3e-05 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 3e-05 | |
| PRK10217 | 355 | PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; | 4e-05 | |
| PLN02725 | 306 | PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5- | 5e-05 | |
| cd05230 | 305 | cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase | 7e-05 | |
| COG1089 | 345 | COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve | 7e-05 | |
| TIGR01181 | 317 | TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd | 8e-05 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 1e-04 | |
| cd05253 | 332 | cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera | 1e-04 | |
| COG1088 | 340 | COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel | 1e-04 | |
| pfam04321 | 284 | pfam04321, RmlD_sub_bind, RmlD substrate binding d | 1e-04 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 1e-04 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 3e-04 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 3e-04 | |
| cd05252 | 336 | cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata | 5e-04 | |
| PRK10084 | 352 | PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; | 5e-04 | |
| COG1086 | 588 | COG1086, COG1086, Predicted nucleoside-diphosphate | 6e-04 | |
| cd05239 | 300 | cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte | 6e-04 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 6e-04 | |
| PLN02572 | 442 | PLN02572, PLN02572, UDP-sulfoquinovose synthase | 6e-04 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 7e-04 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 0.001 | |
| pfam02719 | 280 | pfam02719, Polysacc_synt_2, Polysaccharide biosynt | 0.001 | |
| TIGR02197 | 314 | TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep | 0.001 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 0.001 | |
| PLN02260 | 668 | PLN02260, PLN02260, probable rhamnose biosynthetic | 0.001 | |
| cd05272 | 308 | cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext | 0.002 | |
| PLN02725 | 306 | PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5- | 0.002 | |
| PLN02260 | 668 | PLN02260, PLN02260, probable rhamnose biosynthetic | 0.002 | |
| TIGR01214 | 287 | TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | 0.002 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 0.003 | |
| cd05258 | 337 | cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e | 0.004 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 0.004 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 269 bits (690), Expect = 1e-85
Identities = 90/159 (56%), Positives = 114/159 (71%), Gaps = 3/159 (1%)
Query: 64 THDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 123
H ID VIHFAA+KAVGES+Q+PL YY NN++ T+NLLE M++HGV VFSSS VYGE
Sbjct: 67 EHKIDAVIHFAALKAVGESVQKPLKYYDNNVVGTLNLLEAMRAHGVKNFVFSSSAAVYGE 126
Query: 124 PQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIG 183
P+ +PITE+ P N YG+TK +E++L+DL+KA N + LRYFNP GAHPSG IG
Sbjct: 127 PETVPITEEAPLNPT-NPYGRTKLMVEQILRDLAKAP-GLNYVILRYFNPAGAHPSGLIG 184
Query: 184 EDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
EDP N++PY+ QVA+G + +FG DY T DGT
Sbjct: 185 EDPQIP-NNLIPYVLQVALGRREKLAIFGDDYPTPDGTC 222
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Score = 264 bits (678), Expect = 2e-83
Identities = 97/158 (61%), Positives = 117/158 (74%), Gaps = 1/158 (0%)
Query: 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP 124
D VIHFA +KAVGES+ +PL+YY NNL+ TINLLEVM HG +LVFSSS TVYG+P
Sbjct: 80 TRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQP 139
Query: 125 QFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGE 184
+ +P TE+ P N YG+TK FIEE+ +D+ + EW II LRYFNPVGAHPSGRIGE
Sbjct: 140 EEVPCTEEFPLSAT-NPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGE 198
Query: 185 DPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
DP N+MPY+ QVA+G +P TVFG DY T+DGTG
Sbjct: 199 DPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTG 236
|
Length = 352 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 249 bits (639), Expect = 6e-78
Identities = 71/159 (44%), Positives = 102/159 (64%), Gaps = 3/159 (1%)
Query: 64 THDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 123
+ ID V+HFAA +VGES+Q PL YY NN++ T+NL+E M GV + +FSS+ VYGE
Sbjct: 65 ENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGE 124
Query: 124 PQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIG 183
P PI+E P I N YG++K EE+L+D +KA+ + ++ LRYFN GA P G +G
Sbjct: 125 PTTSPISETSPLAPI-NPYGRSKLMSEEILRDAAKANP-FKVVILRYFNVAGACPDGTLG 182
Query: 184 EDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
+ T ++P A+ A+G + +FG DY+T+DGT
Sbjct: 183 QRY-PGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTC 220
|
Length = 329 |
| >gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE | Back alignment and domain information |
|---|
Score = 238 bits (608), Expect = 2e-73
Identities = 91/172 (52%), Positives = 118/172 (68%), Gaps = 2/172 (1%)
Query: 51 DLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 110
DL +EL H ID VIHFA + AVGES+Q+PL YY+NN++ T+NLLE M+ GV
Sbjct: 55 DLRDRELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAGVK 114
Query: 111 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRY 170
+ +FSSS VYGEP +PI+ED P G I N YG++K E++L+DL KA +W+ + LRY
Sbjct: 115 KFIFSSSAAVYGEPSSIPISEDSPLGPI-NPYGRSKLMSEQILRDLQKADPDWSYVILRY 173
Query: 171 FNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
FN GAHPSG IGEDP T+++PY QVA+G + T+FG DY T DGT
Sbjct: 174 FNVAGAHPSGDIGEDPPGI-THLIPYACQVAVGKRDKLTIFGTDYPTPDGTC 224
|
Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328 |
| >gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Score = 215 bits (548), Expect = 1e-64
Identities = 104/235 (44%), Positives = 142/235 (60%), Gaps = 22/235 (9%)
Query: 19 LLRTFERVTGK-PVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVK 77
+L ER+ GK P EGDI N L + L H ID VIHFA +K
Sbjct: 40 VLPVIERLGGKHPTFV------EGDI----RNEALLTEILH-----DHAIDTVIHFAGLK 84
Query: 78 AVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137
AVGES+Q+PL YY NN+ T+ L+ M++ V L+FSSS TVYG+ +P E PTG
Sbjct: 85 AVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGT 144
Query: 138 IKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYL 197
++ YGK+K +E++L DL KA +W+I LRYFNPVGAHPSG +GEDP N+MPY+
Sbjct: 145 PQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYI 204
Query: 198 AQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVHIGDTPCSIRAIEQFTGK 252
AQVA+G + +FG DY TEDGTG + ++++ + + D + A+E+ K
Sbjct: 205 AQVAVGRRDSLAIFGNDYPTEDGTG----VRDYIHVMDLADG--HVAAMEKLANK 253
|
Length = 338 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 200 bits (510), Expect = 4e-59
Identities = 107/301 (35%), Positives = 147/301 (48%), Gaps = 60/301 (19%)
Query: 202 IGSKPHFTVF--GADYETEDGTGKVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSC 259
IGS H V A Y+ VV +DN N A+ + +++FY
Sbjct: 11 IGS--HTVVELLEAGYD-------VVVLDNLSNG--------HREALPRIEKIRIEFYEG 53
Query: 260 DLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 319
D+ D+ L ++FA+H ID VIHFAA+KAVGES+Q+PL YY NN++ T+NLLE M++HGV
Sbjct: 54 DIRDRAALDKVFAEHKIDAVIHFAALKAVGESVQKPLKYYDNNVVGTLNLLEAMRAHGVK 113
Query: 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVL---QLLRTFERVTGNKP 376
VFSSS VYGEP+ +PITE+ P N Y G + L Q+LR + G
Sbjct: 114 NFVFSSSAAVYGEPETVPITEEAPLNPT-NPY------GRTKLMVEQILRDLAKAPGLNY 166
Query: 377 VPYIFYNL-------GTGQGTSVLQLL--RTFERVTGNKPVPYIF---YNLGTGQGTSV- 423
V ++N G+ + L + G + IF Y T GT V
Sbjct: 167 VILRYFNPAGAHPSGLIGEDPQIPNNLIPYVLQVALGRREKLAIFGDDYP--TPDGTCVR 224
Query: 424 ------------LQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYI 471
+ L E G YNLGTG+G SVL+++ FE+V+GKP+PY
Sbjct: 225 DYIHVVDLADAHVLALEKLENGGG----SEIYNLGTGRGYSVLEVVEAFEKVSGKPIPYE 280
Query: 472 F 472
Sbjct: 281 I 281
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Score = 165 bits (419), Expect = 7e-46
Identities = 62/125 (49%), Positives = 81/125 (64%), Gaps = 8/125 (6%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTG---KKVDFYSCDLVDKNRLGEIFAKHDIDCV 279
KVV IDN NS ++R +++ G + F+ DL DK L ++FA D V
Sbjct: 31 KVVVIDNLDNSSEE-----ALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAV 85
Query: 280 IHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPIT 339
IHFA +KAVGES+ +PL+YY NNL+ TINLLEVM HG +LVFSSS TVYG+P+ +P T
Sbjct: 86 IHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCT 145
Query: 340 EDHPT 344
E+ P
Sbjct: 146 EEFPL 150
|
Length = 352 |
| >gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 9e-45
Identities = 96/278 (34%), Positives = 133/278 (47%), Gaps = 47/278 (16%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHF 282
+VV +DN N + ++ E+ T V F DL D+ L +F +H ID VIHF
Sbjct: 25 EVVILDNLSNG-----SREALPRGERIT--PVTFVEGDLRDRELLDRLFEEHKIDAVIHF 77
Query: 283 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDH 342
A + AVGES+Q+PL YY+NN++ T+NLLE M+ GV + +FSSS VYGEP +PI+ED
Sbjct: 78 AGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAGVKKFIFSSSAAVYGEPSSIPISEDS 137
Query: 343 PTGNIKNFYNLGTGQGTS--VLQ------------LLRTFERVTGNKPVPYIFYNLGTGQ 388
P G I N Y G + S +L+ +LR F V G P ++G
Sbjct: 138 PLGPI-NPY--GRSKLMSEQILRDLQKADPDWSYVILRYFN-VAGAHPS----GDIGEDP 189
Query: 389 GTSVLQLLRTFERVTGNKPVPYIF-YNLGTGQGTSV-------------LQLLRTFERVT 434
+ + G + IF + T GT V L L
Sbjct: 190 PGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNGG 249
Query: 435 GKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 472
G V YNLG GQG SVL+++ F++V+GK P
Sbjct: 250 GSHV----YNLGYGQGFSVLEVIEAFKKVSGKDFPVEL 283
|
Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 2e-42
Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 22/148 (14%)
Query: 202 IGSKPHFTVF--GADYETEDGTGKVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSC 259
IGS H +E VV +DN N ++ ++ FY
Sbjct: 12 IGS--HTVRQLLKTGHE-------VVVLDNLSNG-----HKIALLKLQ------FKFYEG 51
Query: 260 DLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 319
DL+D+ L +F ++ ID V+HFAA +VGES+Q PL YY NN++ T+NL+E M GV
Sbjct: 52 DLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVK 111
Query: 320 QLVFSSSCTVYGEPQFLPITEDHPTGNI 347
+ +FSS+ VYGEP PI+E P I
Sbjct: 112 KFIFSSTAAVYGEPTTSPISETSPLAPI 139
|
Length = 329 |
| >gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Score = 151 bits (382), Expect = 7e-41
Identities = 115/377 (30%), Positives = 155/377 (41%), Gaps = 105/377 (27%)
Query: 224 VVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFA 283
VV +DN NS + IE+ GK F D+ ++ L EI H ID VIHFA
Sbjct: 27 VVILDNLCNS-----KRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHFA 81
Query: 284 AVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHP 343
+KAVGES+Q+PL YY NN+ T+ L+ M++ V L+FSSS TVYG+ +P E P
Sbjct: 82 GLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFP 141
Query: 344 TGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERV- 402
TG ++ Y G S L V I +L Q + LLR F V
Sbjct: 142 TGTPQSPY------GKSKLM-------------VEQILTDLQKAQPDWSIALLRYFNPVG 182
Query: 403 ------TGNKP-------VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQ 449
G P +PYI + G+ S+ + G P T
Sbjct: 183 AHPSGDMGEDPQGIPNNLMPYI-AQVAVGRRDSL--------AIFGNDYP-------TED 226
Query: 450 GTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQ 509
GT V R + V +L G ++ +L KP +I YNLG G
Sbjct: 227 GTGV----RDYIHVM---------DLADGHVAAMEKL-------ANKPGVHI-YNLGAGV 265
Query: 510 GTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGD 569
G+SVL ++ F + GKPV Y F RREGD
Sbjct: 266 GSSVLDVVNAFSKACGKPVNYHF------------------------------APRREGD 295
Query: 570 IVSMYANTDLAQRELGW 586
+ + +A+ A REL W
Sbjct: 296 LPAYWADASKADRELNW 312
|
Length = 338 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 1e-30
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 16/159 (10%)
Query: 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP 124
D VIH AA VG S ++P + + N++ T+ LLE + GV + VF+SS VYG+
Sbjct: 62 VQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFASSSEVYGDV 121
Query: 125 QFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGE 184
PITED P G + + Y K E +++ ++A+ + LR FN G
Sbjct: 122 ADPPITEDTPLGPL-SPYAAAKLAAERLVEAYARAYG-LRAVILRLFNVYGPG------- 172
Query: 185 DPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGK 223
+P T+++P L + + KP + G DGT +
Sbjct: 173 NPDPFVTHVIPALIRRILEGKP-ILLLG------DGTQR 204
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 113 bits (286), Expect = 5e-29
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL 127
D V+H AA+ V S P ++ N++ T+NLLE + GV + V++SS +VYG P+ L
Sbjct: 32 DVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAGVKRFVYASSASVYGSPEGL 91
Query: 128 PITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPT 187
P E+ P + YG +K E +L+ +++ ++ LR N G R
Sbjct: 92 PEEEETPP-RPLSPYGVSKLAAEHLLRSYGESYG-LPVVILRLANVYGPGQRPR------ 143
Query: 188 KSFTNIMPYLAQVAIGSKPHFTVFG 212
++ + A+ KP TVFG
Sbjct: 144 --LDGVVNDFIRRALEGKP-LTVFG 165
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 99.7 bits (249), Expect = 1e-23
Identities = 39/102 (38%), Positives = 56/102 (54%)
Query: 244 RAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNL 303
R E ++ F+ DL D + L + A+ D VIH AA VG S ++P + + N+
Sbjct: 32 RRSESLNTGRIRFHEGDLTDPDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANV 91
Query: 304 IATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 345
+ T+ LLE + GV + VF+SS VYG+ PITED P G
Sbjct: 92 LGTLRLLEAARRAGVKRFVFASSSEVYGDVADPPITEDTPLG 133
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 97.7 bits (244), Expect = 2e-22
Identities = 71/261 (27%), Positives = 115/261 (44%), Gaps = 47/261 (18%)
Query: 224 VVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFA 283
V+ +DN + + V F D+ D + F +D V H A
Sbjct: 26 VIVLDNLSTG--------KKENLPEVKPN-VKFIEGDIRDDELVEFAF--EGVDYVFHQA 74
Query: 284 AVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHP 343
A +V S+++P+ ++ N++ T+NLLE + GV + V++SS +VYG+P +LP EDHP
Sbjct: 75 AQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAGVKRFVYASSSSVYGDPPYLPKDEDHP 134
Query: 344 TGNIKNFYNLGTGQGTSVL--QLLRTFERVTGNKPVPYIFYNL-GTGQGTS-----VLQL 395
N + Y + + + F R+ G V ++N+ G Q + V+
Sbjct: 135 -PNPLSPYAV-----SKYAGELYCQVFARLYGLPTVSLRYFNVYGPRQDPNGGYAAVIP- 187
Query: 396 LRTF-ERVTGNKPVPYIFYNLGTGQGT-------SVLQ--LLRTFERVTGKPVPYIFYNL 445
F ER +P P I+ G G+ T V++ LL G+ YN+
Sbjct: 188 --IFIERALKGEP-PTIY---GDGEQTRDFTYVEDVVEANLLAATAGAGGE-----VYNI 236
Query: 446 GTGQGTSVLQLLRTFERVTGK 466
GTG+ TSV +L + GK
Sbjct: 237 GTGKRTSVNELAELIREILGK 257
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 96.9 bits (242), Expect = 4e-22
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 13/172 (7%)
Query: 49 NTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG 108
D+ EL +D V H AA +V S+++P+ ++ N++ T+NLLE + G
Sbjct: 51 EGDIRDDELV--EFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAG 108
Query: 109 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHK-EWNIIS 167
V + V++SS +VYG+P +LP EDHP N + Y +K+ E + ++ + +S
Sbjct: 109 VKRFVYASSSSVYGDPPYLPKDEDHP-PNPLSPYAVSKYAGELYCQVFARLYGLPT--VS 165
Query: 168 LRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETED 219
LRYFN G P +DP + ++P + A+ +P T++G +T D
Sbjct: 166 LRYFNVYG--P----RQDPNGGYAAVIPIFIERALKGEP-PTIYGDGEQTRD 210
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 94.6 bits (235), Expect = 2e-21
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 10/163 (6%)
Query: 59 WSARCTHDIDCVIHFAAVKAVGESM-QEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSS 117
D VIH AA +V +S +P + N+ T+NLLE ++ GV + VF+SS
Sbjct: 57 VDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASS 116
Query: 118 C-TVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGA 176
VYG+P LPI ED N YG +K E++L+ ++ + ++ LR FN G
Sbjct: 117 VSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYG-LPVVILRPFNVYGP 175
Query: 177 HPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETED 219
D + ++ + + +P + G +T D
Sbjct: 176 G-------DKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRD 211
|
Length = 314 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 94.1 bits (235), Expect = 4e-21
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 3 NKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62
++ YNLGTG+G SVL+++ FE+V+GKP+PY + RR GD S+ A+ A++ELGW
Sbjct: 249 SEIYNLGTGRGYSVLEVVEAFEKVSGKPIPYEIAPRRAGDPASLVADPSKAREELGWKP- 307
Query: 63 CTHDID 68
D++
Sbjct: 308 -KRDLE 312
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 93.0 bits (232), Expect = 1e-20
Identities = 29/57 (50%), Positives = 41/57 (71%)
Query: 533 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSAR 589
YNLGTG+G SVL+++ FE+V+GKP+PY + RR GD S+ A+ A+ ELGW +
Sbjct: 252 YNLGTGRGYSVLEVVEAFEKVSGKPIPYEIAPRRAGDPASLVADPSKAREELGWKPK 308
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 91.9 bits (228), Expect = 3e-20
Identities = 67/260 (25%), Positives = 104/260 (40%), Gaps = 31/260 (11%)
Query: 224 VVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFA 283
V +D + + + V+F DL D++ + E+ D VIH A
Sbjct: 27 VRGLDRLRDGLDPLLSG-------------VEFVVLDLTDRDLVDELAKGVP-DAVIHLA 72
Query: 284 AVKAVGESM-QEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSC-TVYGEPQFLPITED 341
A +V +S +P + N+ T+NLLE ++ GV + VF+SS VYG+P LPI ED
Sbjct: 73 AQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDED 132
Query: 342 HPTGNIKNFYNLGTGQGTSVL---QLLRTFERVTGNKPV---PYIFYNLGTGQGTSVLQL 395
N Y G S L QLLR + R+ G V P+ Y G S +
Sbjct: 133 LGPPRPLNPY------GVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVV 186
Query: 396 LRTFERVTGNKPVPYIFYNLGTGQG-TSVLQLLRTFERVTGKPVPYIFYNLGTGQG-TSV 453
++ +P+ I + + V + P + +N+G+G +V
Sbjct: 187 SAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGGV-FNIGSGTAEITV 245
Query: 454 LQLLRTFERVTGKPVPYIFY 473
+L G P I Y
Sbjct: 246 RELAEAVAEAVGSKAPLIVY 265
|
Length = 314 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 90.3 bits (225), Expect = 8e-20
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 6 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTH 65
+NLG+G G SVL+++ ++VTG+ +P + RR GD + A++ A++ LGW
Sbjct: 250 FNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRRAGDPAILVADSSKARQILGWQPTYD- 308
Query: 66 DIDCVIH 72
D++ +I
Sbjct: 309 DLEDIIK 315
|
Length = 329 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 90.3 bits (225), Expect = 9e-20
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 533 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSAR 589
+NLG+G G SVL+++ ++VTG+ +P + RR GD + A++ A++ LGW
Sbjct: 250 FNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRRAGDPAILVADSSKARQILGWQPT 306
|
Length = 329 |
| >gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Score = 88.9 bits (221), Expect = 4e-19
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 533 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTV 592
YNLGTG+GTSVL+++ FE+ +GK +P + RR GD +YA+T+ A++ELGW A+ +
Sbjct: 268 YNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPRRPGDAEEVYASTEKAEKELGWKAKYGI 327
Query: 593 K 593
Sbjct: 328 D 328
|
Length = 352 |
| >gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Score = 88.9 bits (221), Expect = 4e-19
Identities = 30/57 (52%), Positives = 43/57 (75%)
Query: 6 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62
YNLGTG+GTSVL+++ FE+ +GK +P + RR GD +YA+T+ A+KELGW A+
Sbjct: 268 YNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPRRPGDAEEVYASTEKAEKELGWKAK 324
|
Length = 352 |
| >gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 85.8 bits (213), Expect = 2e-18
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 222 GKVVAIDNFVNSVHIGDTPCSIRAIEQFTGKK-VDFYSCDLVDKNRLGEIFAKHDIDCVI 280
+VV +DN + G IE K F DL+D + AK D D V
Sbjct: 24 NEVVVVDNLSS----GRR----ENIEPEFENKAFRFVKRDLLDTA---DKVAKKDGDTVF 72
Query: 281 HFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITE 340
H AA V +P + + N++AT N+LE M+++GV ++VF+SS TVYGE + +P E
Sbjct: 73 HLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANGVKRIVFASSSTVYGEAKVIPTPE 132
Query: 341 DHPT 344
D+P
Sbjct: 133 DYPP 136
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|206121 pfam13950, Epimerase_Csub, UDP-glucose 4-epimerase C-term subunit | Back alignment and domain information |
|---|
Score = 76.3 bits (189), Expect = 2e-17
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 22 TFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDID 68
FE+ +GK +PY + RR GD+ YA+ A+KELGW A ++
Sbjct: 1 AFEKASGKKIPYEIVPRRPGDVAECYADPSKAEKELGWKA--ERGLE 45
|
This domain is the very C-terminal subunit of UDP-glucose 4-epimerase. Length = 62 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 79.7 bits (197), Expect = 5e-17
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 277 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL 336
D V+H AA+ V S P ++ N++ T+NLLE + GV + V++SS +VYG P+ L
Sbjct: 32 DVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAGVKRFVYASSASVYGSPEGL 91
Query: 337 PITEDHPTGNIKNFY 351
P E+ P + Y
Sbjct: 92 PEEEETPP-RPLSPY 105
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|206121 pfam13950, Epimerase_Csub, UDP-glucose 4-epimerase C-term subunit | Back alignment and domain information |
|---|
Score = 75.2 bits (186), Expect = 5e-17
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 549 TFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVK 593
FE+ +GK +PY + RR GD+ YA+ A++ELGW A ++
Sbjct: 1 AFEKASGKKIPYEIVPRRPGDVAECYADPSKAEKELGWKAERGLE 45
|
This domain is the very C-terminal subunit of UDP-glucose 4-epimerase. Length = 62 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 78.1 bits (193), Expect = 7e-16
Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 254 VDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVM 313
VD+ D ++ L ID VIH A+ S + P++ + N+ T+ LLE
Sbjct: 43 VDYIKGDYENRADLESAL--VGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEAC 100
Query: 314 KSHGVYQLVF-SSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVL---QLLRTFE 369
+ G+ +++F SS TVYG P+ LPI+E PT I ++ G S L + LR ++
Sbjct: 101 AAAGIGKIIFASSGGTVYGVPEQLPISESDPTLPISSY-------GISKLAIEKYLRLYQ 153
Query: 370 RVTGNKPV------PYIFYNLGTGQGTSVLQ-LLRTF-ERVTGNKPVPYIFYNLGTGQGT 421
+ G PY G GQ Q ++ ++ +P+ I+ G G
Sbjct: 154 YLYGLDYTVLRISNPY-----GPGQRPDGKQGVIPIALNKILRGEPIE-IW-----GDGE 202
Query: 422 SVL------QLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFY 473
S+ L+ + +N+G+G G S+ +L+ E+VTG+ V I+
Sbjct: 203 SIRDYIYIDDLVEALMALLRSKGLEEVFNIGSGIGYSLAELIAEIEKVTGRSVQVIYT 260
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 77.7 bits (192), Expect = 1e-15
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Query: 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQ 125
D D V H AA V +P + + N++AT N+LE M+++GV ++VF+SS TVYGE +
Sbjct: 67 DGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANGVKRIVFASSSTVYGEAK 126
Query: 126 FLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVG 175
+P ED+P I +VYG +K E ++ + + W R+ N VG
Sbjct: 127 VIPTPEDYPPLPI-SVYGASKLAAEALISAYAHLFGFQAWIF---RFANIVG 174
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 77.0 bits (190), Expect = 3e-15
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 256 FYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKS 315
F DL D+ L +F H+ D VIH AA V S++ P Y +N++ +NLLE+ +
Sbjct: 57 FVKGDLEDREALRRLFKDHEFDAVIHLAAQAGVRYSLENPHAYVDSNIVGFLNLLELCRH 116
Query: 316 HGVYQLVFSSSCTVYGEPQFLPITE----DHP 343
GV LV++SS +VYG +P +E DHP
Sbjct: 117 FGVKHLVYASSSSVYGLNTKMPFSEDDRVDHP 148
|
This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 5e-15
Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVF-SSSCTVYGE 123
ID VIH A+ S + P++ + N+ T+ LLE + G+ +++F SS TVYG
Sbjct: 61 VGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKIIFASSGGTVYGV 120
Query: 124 PQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGA--HPSGR 181
P+ LPI+E PT I + YG +K IE+ L+ L + + LR NP G P G+
Sbjct: 121 PEQLPISESDPTLPI-SSYGISKLAIEKYLR-LYQYLYGLDYTVLRISNPYGPGQRPDGK 178
Query: 182 IGEDPT 187
G P
Sbjct: 179 QGVIPI 184
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE | Back alignment and domain information |
|---|
Score = 73.9 bits (182), Expect = 2e-14
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 517 LRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYAN 576
L G V YNLG GQG SVL+++ F++V+GK P + RR GD S+ A+
Sbjct: 242 LEYLLNGGGSHV----YNLGYGQGFSVLEVIEAFKKVSGKDFPVELAPRRPGDPASLVAD 297
Query: 577 TDLAQRELGWSA 588
+RELGW
Sbjct: 298 ASKIRRELGWQP 309
|
Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 73.6 bits (181), Expect = 3e-14
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG-- 122
+ D V+H A + E ++ N+ T N+L+ + GV ++V +SS VYG
Sbjct: 61 READAVVHLAFILDPPRDGAE---RHRINVDGTQNVLDACAAAGVPRVVVTSSVAVYGAH 117
Query: 123 EPQFLPITEDHPT-GNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAH 177
P+TED P G+ + Y + K +E++L + + H E N+ LR +G
Sbjct: 118 PDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTVLRPATILGPG 173
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE | Back alignment and domain information |
|---|
Score = 73.5 bits (181), Expect = 4e-14
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 6 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTH 65
YNLG GQG SVL+++ F++V+GK P + RR GD S+ A+ ++ELGW + T
Sbjct: 254 YNLGYGQGFSVLEVIEAFKKVSGKDFPVELAPRRPGDPASLVADASKIRRELGWQPKYT- 312
Query: 66 DIDCVI 71
D++ +I
Sbjct: 313 DLEEII 318
|
Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328 |
| >gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 73.1 bits (180), Expect = 5e-14
Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP 124
H+ D VIH AA V S++ P Y +N++ +NLLE+ + GV LV++SS +VYG
Sbjct: 75 HEFDAVIHLAAQAGVRYSLENPHAYVDSNIVGFLNLLELCRHFGVKHLVYASSSSVYGLN 134
Query: 125 QFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKE---WNI--ISLRYFNPVGAHPS 179
+P +ED + ++Y TK E M AH + I LR+F G P
Sbjct: 135 TKMPFSEDDRVDHPISLYAATKKANELM------AHTYSHLYGIPTTGLRFFTVYG--PW 186
Query: 180 GR 181
GR
Sbjct: 187 GR 188
|
This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332 |
| >gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 69.3 bits (170), Expect = 7e-13
Identities = 44/183 (24%), Positives = 71/183 (38%), Gaps = 27/183 (14%)
Query: 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVYGEPQF 126
D V H AA+ + G + + + Y+ N+ T NLLE ++ +G + VF+SS VYG P
Sbjct: 68 DVVFHLAAIVS-GGAEADFDLGYRVNVDGTRNLLEALRKNGPKPRFVFTSSLAVYGLPLP 126
Query: 127 LPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNI------ISLRYFNPVGAHPS- 179
P+T DH + + YG K E +L D S+ + +R P A +
Sbjct: 127 NPVT-DHTALDPASSYGAQKAMCELLLNDYSRRGFVDGRTLRLPTVCVRPGRPNKAASAF 185
Query: 180 -GRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVHIGD 238
I +P +P + T A+ NFV++ +
Sbjct: 186 ASTIIREPLVGEEAGLPV--------AEQLRYWLKSVAT--------AVANFVHAAELPA 229
Query: 239 TPC 241
Sbjct: 230 EKF 232
|
Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 2e-11
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 6 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTH 65
YNLG G G+SVL ++ F + GKPV Y RREGD+ + +A+ A +EL W R T
Sbjct: 259 YNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNW--RVTR 316
Query: 66 DID 68
+D
Sbjct: 317 TLD 319
|
Length = 338 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 65.1 bits (159), Expect = 2e-11
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEV 312
KV++ D+ D ++F + + D V+H A + E ++ N+ T N+L+
Sbjct: 41 KVEYVRLDIRDPA-AADVFREREADAVVHLAFILDPPRDGAE---RHRINVDGTQNVLDA 96
Query: 313 MKSHGVYQLVFSSSCTVYG--EPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER 370
+ GV ++V +SS VYG P+TED P F + V QLL F R
Sbjct: 97 CAAAGVPRVVVTSSVAVYGAHPDNPAPLTEDAPLRGSPEFA--YSRDKAEVEQLLAEFRR 154
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 3e-11
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Query: 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQ 125
D V H AA+ A+ S PL Y + N+ T+N+LE ++V +S+ VYG Q
Sbjct: 68 KCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRVVHTSTSEVYGTAQ 127
Query: 126 FLPITEDHPTGNIKN---VYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVG 175
+PI EDHP I Y +K + + ++ + +R FN G
Sbjct: 128 DVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSF-GLPVTIIRPFNTYG 179
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 247 EQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIAT 306
+ + F S D+ D + + + K D+ V H AA+ A+ S PL Y + N+ T
Sbjct: 42 DNAVHDRFHFISGDVRDASEVEYLVKKCDV--VFHLAALIAIPYSYTAPLSYVETNVFGT 99
Query: 307 INLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 349
+N+LE ++V +S+ VYG Q +PI EDHP I
Sbjct: 100 LNVLEAACVLYRKRVVHTSTSEVYGTAQDVPIDEDHPLLYINK 142
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 1e-10
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 46/224 (20%)
Query: 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQ 125
D V H AA+ A+ S P Y N+ T+N+L+ + GV ++V +S+ VYG Q
Sbjct: 70 GCDVVFHLAALIAIPYSYIAPDSYVDTNVTGTLNVLQAARDLGVEKVVHTSTSEVYGTAQ 129
Query: 126 FLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWN--IISLRYFNPVGAHPSGR-- 181
++PI E HP ++ Y +K +++ LS ++ +N + +R FN G S R
Sbjct: 130 YVPIDEKHPL-QGQSPYSASKIGADQLA--LS-FYRSFNTPVTIIRPFNTYGPRQSARAV 185
Query: 182 ----IGE-------------DPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKV 224
I + PT+ F Y+ G F A E++ G+V
Sbjct: 186 IPTIITQIASGKRRIKLGSLSPTRDFN----YVTDTVRG-------FIAIAESDKTVGEV 234
Query: 225 VAI-DNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRL 267
+ I NF + IGDT I I G +V+ + D+ RL
Sbjct: 235 INIGSNF--EISIGDTVKLIAEI---MGSEVEIET----DEERL 269
|
This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297 |
| >gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 2e-10
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLE 311
K++ + D+ D + + + A D V H AA+ A+ S P Y N+ T+N+L+
Sbjct: 49 DKIEVVTGDIRDPDSVRK--AMKGCDVVFHLAALIAIPYSYIAPDSYVDTNVTGTLNVLQ 106
Query: 312 VMKSHGVYQLVFSSSCTVYGEPQFLPITEDHP 343
+ GV ++V +S+ VYG Q++PI E HP
Sbjct: 107 AARDLGVEKVVHTSTSEVYGTAQYVPIDEKHP 138
|
This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297 |
| >gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 3e-10
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLL 310
++ + DL D + L K D + H AA V S +P + N + T+NLL
Sbjct: 48 KDRITLHYGDLTDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLL 107
Query: 311 EVMKSHG----VYQLVFSSSCTVYGEPQFLPITEDHP 343
E ++ G YQ +SS YG+ Q LP +E P
Sbjct: 108 EAIRILGLDARFYQ---ASSSEEYGKVQELPQSETTP 141
|
GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187565 cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synthase (Arabidopsis thaliana SQD1 and related proteins), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 1e-09
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 243 IRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESM---QEPLMYY 299
+RA ++ TGK ++FY D D L E+ A H+ D V+HFA ++ SM +
Sbjct: 57 LRAWKELTGKTIEFYVGDACDYEFLAELLASHEPDAVVHFAEQRSAPYSMIDREHANYTQ 116
Query: 300 KNNLIATINLLEVMKSHGV-YQLVFSSSCTVYGEPQFLPITE 340
NN+I T+NLL +K LV + YG P I E
Sbjct: 117 HNNVIGTLNLLFAIKEFDPDCHLVKLGTMGEYGTPNI-DIPE 157
|
Arabidopsis thaliana UDP-sulfoquinovose-synthase ( SQD1), an extended SDR, catalyzes the transfer of SO(3)(-) to UDP-glucose in the biosynthesis of plant sulfolipids. Members of this subgroup share the conserved SDR catalytic residues, and a partial match to the characteristic extended-SDR NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 382 |
| >gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 1e-09
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHF 282
+V+ DN + G+ ++A V F D+ ++N L ++F DID +IH
Sbjct: 26 EVIGFDNLMRRGSFGNLA-WLKANR--EDGGVRFVHGDIRNRNDLEDLFE--DIDLIIHT 80
Query: 283 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQ-LVFSSSCTVYG-EPQFLPITE 340
AA +V S P + ++ N + T+N+LE + H +F+S+ VYG P +LP+ E
Sbjct: 81 AAQPSVTTSASSPRLDFETNALGTLNVLEAARQHAPNAPFIFTSTNKVYGDLPNYLPLEE 140
Query: 341 D 341
Sbjct: 141 L 141
|
CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 58.7 bits (143), Expect = 3e-09
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 256 FYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKS 315
F D+ D + +F + ID VIHFAA V S+ +P + + N++ T LLE +
Sbjct: 55 FVKGDICDAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPFIRTNVLGTYTLLEAARK 114
Query: 316 HGVYQLVFSSSCTVYGE----PQFLPITEDHP 343
+GV + V S+ VYG+ +F TE P
Sbjct: 115 YGVKRFVHISTDEVYGDLLDDGEF---TETSP 143
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|185103 PRK15181, PRK15181, Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Score = 58.6 bits (141), Expect = 3e-09
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 121
+ ++D V+H AA+ +V S+++P+ N+ +N+L + V +++S + Y
Sbjct: 86 KACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTY 145
Query: 122 GEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGR 181
G+ LP E+ G + Y TK ++ E+ D+ E+N I LRYFN G
Sbjct: 146 GDHPDLPKIEER-IGRPLSPYAVTK-YVNELYADVFARSYEFNAIGLRYFNVFGRR---- 199
Query: 182 IGEDPTKSFTNIMP 195
++P +++ ++P
Sbjct: 200 --QNPNGAYSAVIP 211
|
Length = 348 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 6e-09
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Query: 59 WSARCTHDIDCVIHFAA-VKAVGESMQEPL-MYYKNNLIATINLLEVMKSHGVYQLVFSS 116
+D V+H AA V + + +PL Y K N T L GV + VF S
Sbjct: 50 SFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVFLS 109
Query: 117 SCTVYGEP-QFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH 160
S V GE P E P ++ YG++K E L +L +
Sbjct: 110 SVKVNGEGTVGAPFDETDPP-APQDAYGRSKLEAERALLELGASD 153
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 9e-09
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Query: 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQ 125
I+ + H A E+ + +M NN T LL + + +++SS VYG
Sbjct: 68 KIEAIFHQGACSDTTETDGKYMM--DNNYQYTKELLHYCLEKKI-RFIYASSAAVYGNGS 124
Query: 126 FLPITEDHPTGNIK--NVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAH 177
L ED T N++ NVYG +K ++ + K ++ LRYFN G
Sbjct: 125 -LGFAEDIETPNLRPLNVYGYSKLLFDQWARRHGKE-VLSQVVGLRYFNVYGPR 176
|
This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 56.8 bits (138), Expect = 1e-08
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 473 YNLGTGQGTSVLQLLRTFERVTGKPVPYIF 502
YNLGTG+G SVL+++ FE+V+GKP+PY
Sbjct: 252 YNLGTGRGYSVLEVVEAFEKVSGKPIPYEI 281
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 2e-08
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 254 VDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVM 313
F D+ D+ + +F ++ D V+HFAA V S+ P + + N++ T LLE
Sbjct: 53 YRFVQGDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAA 112
Query: 314 KSHGV-YQLVFSSSCTVYGE 332
+ + ++ S+ VYG+
Sbjct: 113 RKYWGKFRFHHISTDEVYGD 132
|
Length = 340 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 3e-08
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 413 YNLGTGQGTSVLQLLRTFERVTGKPVPYIF 442
+NLG+G G SVL+++ ++VTG+ +P
Sbjct: 250 FNLGSGNGFSVLEVIEAAKKVTGRDIPVEI 279
|
Length = 329 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 3e-08
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 443 YNLGTGQGTSVLQLLRTFERVTGKPVPYIF 472
+NLG+G G SVL+++ ++VTG+ +P
Sbjct: 250 FNLGSGNGFSVLEVIEAAKKVTGRDIPVEI 279
|
Length = 329 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 3e-08
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 473 YNLGTGQGTSVLQLLRTFERVTGKPVPYIF 502
+NLG+G G SVL+++ ++VTG+ +P
Sbjct: 250 FNLGSGNGFSVLEVIEAAKKVTGRDIPVEI 279
|
Length = 329 |
| >gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein | Back alignment and domain information |
|---|
Score = 54.4 bits (132), Expect = 5e-08
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 246 IEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYY------ 299
+++ K+ F+ D+ D+ RL +H +D V H AA+K V PL+ Y
Sbjct: 44 RQEYNDPKLRFFIGDVRDRERLERAMEQHGVDTVFHAAALKHV------PLVEYNPMEAI 97
Query: 300 KNNLIATINLLEVMKSHGVYQLVFSSS 326
K N++ T N+ E +GV + V S+
Sbjct: 98 KTNVLGTENVAEAAIENGVEKFVLIST 124
|
This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280 |
| >gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 1e-07
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 260 DLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV- 318
D+ D+ + +F +H D V+HFAA V S+ P + + N++ T LLE ++ +
Sbjct: 58 DIGDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHE 117
Query: 319 YQLVFSSSCTVYG 331
++ S+ VYG
Sbjct: 118 FRFHHISTDEVYG 130
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317 |
| >gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 1e-07
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQ 125
I+ + H A E+ E +M +NN + LL+ G+ +++SS YG+ +
Sbjct: 66 KIEAIFHQGACSDTTETDGEYMM--ENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGE 122
Query: 126 FLPITEDHPTGNIKNVYGKTKHFIEEMLKD--LSKAHKEWNIISLRYFN 172
E NVYG +K ++ ++ L +A ++ LRYFN
Sbjct: 123 -AGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEALSA-QVVGLRYFN 169
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314 |
| >gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 2e-07
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 413 YNLGTGQGTSVLQLLRTFERVTGKPVPYIF 442
YNLGTG+GTSVL+++ FE+ +GK +P
Sbjct: 268 YNLGTGKGTSVLEMVAAFEKASGKKIPLKL 297
|
Length = 352 |
| >gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 2e-07
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 443 YNLGTGQGTSVLQLLRTFERVTGKPVPYIF 472
YNLGTG+GTSVL+++ FE+ +GK +P
Sbjct: 268 YNLGTGKGTSVLEMVAAFEKASGKKIPLKL 297
|
Length = 352 |
| >gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 2e-07
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 473 YNLGTGQGTSVLQLLRTFERVTGKPVPYIF 502
YNLGTG+GTSVL+++ FE+ +GK +P
Sbjct: 268 YNLGTGKGTSVLEMVAAFEKASGKKIPLKL 297
|
Length = 352 |
| >gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 2e-07
Identities = 60/263 (22%), Positives = 96/263 (36%), Gaps = 75/263 (28%)
Query: 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQ-LVFSSSCTVYG-E 123
DID +IH AA +V S P + ++ N + T+N+LE + H +F+S+ VYG
Sbjct: 73 DIDLIIHTAAQPSVTTSASSPRLDFETNALGTLNVLEAARQHAPNAPFIFTSTNKVYGDL 132
Query: 124 PQFLP-------------------ITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWN 164
P +LP I+E P ++YG +K ++ +++ +
Sbjct: 133 PNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSLYGASKGAADQYVQEYGRIFG-LK 191
Query: 165 IISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGK- 223
+ R G G ED + Y + A+ KP T+F G G
Sbjct: 192 TVVFRCGCLTGPRQFGT--ED-----QGWVAYFLKCAVTGKP-LTIF--------GYGGK 235
Query: 224 ----VVAIDNFVNSVH---------------IGDTP---CSIRA----IEQFTGKKVDFY 257
V+ + VN IG S+ E+ TG+K++ Y
Sbjct: 236 QVRDVLHSADLVNLYLRQFQNPDRRKGEVFNIGGGRENSVSLLELIALCEEITGRKMESY 295
Query: 258 SCDLVDKNRLGEIFAKHDIDCVI 280
D+NR G D I
Sbjct: 296 K----DENRPG------DQIWYI 308
|
CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337 |
| >gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 2e-07
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 247 EQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYY------K 300
E+F K+ FY D+ D++R+ H +D V H AA+K V PL+ Y K
Sbjct: 297 EKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVFHAAALKHV------PLVEYNPEEAIK 350
Query: 301 NNLIATINLLEVMKSHGVYQLVFSSS 326
N++ T N+ E +GV + V S+
Sbjct: 351 TNVLGTENVAEAAIKNGVKKFVLIST 376
|
Length = 588 |
| >gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 2e-07
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 228 DNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKA 287
N ++ + S R D+ D N L E +++ + V H AA
Sbjct: 42 PNLFELANLDNKISSTRG--------------DIRDLNALREAIREYEPEIVFHLAAQPL 87
Query: 288 VGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVYG-EPQFLPITEDHPTG 345
V S ++P+ ++ N++ T+NLLE ++ G V +V +S Y + E+ P G
Sbjct: 88 VRLSYKDPVETFETNVMGTVNLLEAIRETGSVKAVVNVTSDKCYENKEWGWGYRENDPLG 147
|
This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336 |
| >gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 2e-07
Identities = 57/230 (24%), Positives = 88/230 (38%), Gaps = 35/230 (15%)
Query: 259 CDLVDKNRLGEIFAKHDIDCVIHFAA-VKAVGESMQEPLMYYKNNLIATINLLEVMKSHG 317
DL D+ + F K D VIH AA V + +M P + ++NL+ N++ G
Sbjct: 35 LDLTDQEAVRAFFEKEKPDYVIHLAAKVGGIVANMTYPADFLRDNLLINDNVIHAAHRFG 94
Query: 318 VYQLVF-SSSCTVYGEPQFLPITED-------HPTGNIKNF-YNLGTGQGTSVLQLLRTF 368
V +LVF SSC Y + PI E PT N Y + + L+L +
Sbjct: 95 VKKLVFLGSSCI-YPDLAPQPIDESDLLTGPPEPT----NEGYAIAK---RAGLKLCEAY 146
Query: 369 ERVTGNKPVPYIFYNL------GTGQGTSVL-QLLRTFER--VTGNKPVPYIFYNLGTG- 418
+ G + + NL + + V+ L+R F + G K V G+G
Sbjct: 147 RKQYGCDYISVMPTNLYGPHDNFDPENSHVIPALIRKFHEAKLRGGKEVT----VWGSGT 202
Query: 419 ---QGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTG 465
+ L R + I N+G+G S+ +L V G
Sbjct: 203 PRREFLYSDDLARAIVFLLENYDEPIIVNVGSGVEISIRELAEAIAEVVG 252
|
GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 4e-07
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 345 GNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 381
G N +NLG+G G SVL+++ ++VTG + +P
Sbjct: 244 GGSNNIFNLGSGNGFSVLEVIEAAKKVTG-RDIPVEI 279
|
Length = 329 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 4e-07
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 533 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTV 592
YN+GTG+ TSV +L + GK + + R GD+ A+ A++ LGW + V
Sbjct: 234 YNIGTGKRTSVNELAELIREILGKELEPVYAPPRPGDVRHSLADISKAKKLLGWEPK--V 291
Query: 593 KISGG 597
G
Sbjct: 292 SFEEG 296
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 6e-07
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 3 NKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62
+ YN+GTG+ TSV +L + GK + + R GD+ A+ A+K LGW +
Sbjct: 231 GEVYNIGTGKRTSVNELAELIREILGKELEPVYAPPRPGDVRHSLADISKAKKLLGWEPK 290
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 6e-07
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 64 THDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 123
ID VIHFAA V S+ +P + + N++ T LLE + +GV + V S+ VYG+
Sbjct: 72 EEKIDAVIHFAAESHVDRSISDPEPFIRTNVLGTYTLLEAARKYGVKRFVHISTDEVYGD 131
Query: 124 ----PQFLPITEDHP 134
+F TE P
Sbjct: 132 LLDDGEF---TETSP 143
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 7e-07
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 269 EIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSC 327
E A D V H AA+ + G + + + Y+ N+ T NLLE ++ +G + VF+SS
Sbjct: 60 EALANGRPDVVFHLAAIVS-GGAEADFDLGYRVNVDGTRNLLEALRKNGPKPRFVFTSSL 118
Query: 328 TVYGEPQFLPITEDHP 343
VYG P P+T DH
Sbjct: 119 AVYGLPLPNPVT-DHT 133
|
Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 7e-07
Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 21/125 (16%)
Query: 51 DLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 110
D+ KE A D V H AA+K V P K N++ T N+++ +GV
Sbjct: 62 DVRDKERLRRAFKERGPDIVFHAAALKHVPSMEDNPEEAIKTNVLGTKNVIDAAIENGVE 121
Query: 111 QLVFSSSCTVYGEPQFLPITED---HPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIIS 167
+ V S+ D +P NV G TK E++L ++ +
Sbjct: 122 KFVCIST--------------DKAVNPV----NVMGATKRVAEKLLLAKNEYSSSTKFST 163
Query: 168 LRYFN 172
+R+ N
Sbjct: 164 VRFGN 168
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 9e-07
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG----VYQLVFSSSCTVYGE 123
D + H AA V S +P + N + T+NLLE ++ G YQ +SS YG+
Sbjct: 74 DEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIRILGLDARFYQ---ASSSEEYGK 130
Query: 124 PQFLPITEDHP 134
Q LP +E P
Sbjct: 131 VQELPQSETTP 141
|
GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 50.6 bits (122), Expect = 1e-06
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 382 YNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 412
+NLG+G G SVL+++ ++VTG + +P
Sbjct: 250 FNLGSGNGFSVLEVIEAAKKVTG-RDIPVEI 279
|
Length = 329 |
| >gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 1e-06
Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 43/229 (18%)
Query: 223 KVVAIDNFVNSV--HIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVI 280
+VV IDNF H+ D P + + DK + ++F D V+
Sbjct: 26 QVVVIDNFATGRREHLPDHP------------NLTVVEGSIADKALVDKLFGDFKPDAVV 73
Query: 281 HFAAVKAVGESMQEPLMYYKN---NLIATINLLEVMKSHGVYQLVFSSSCTVYG-EPQFL 336
H AA + ++P +Y++ N++ N+++ K GV +L++ + YG +P
Sbjct: 74 HTAA------AYKDPDDWYEDTLTNVVGGANVVQAAKKAGVKRLIYFQTALCYGLKPMQQ 127
Query: 337 PITEDHPTGNIKNFYNLGTGQGTSVLQL----LRTFE--RVTGNK----PVPYIFYNLGT 386
PI DHP + Y + G L+L TF VTG + P+P + L
Sbjct: 128 PIRLDHPRAPPGSSYAISKTAGEYYLELSGVDFVTFRLANVTGPRNVIGPLPTFYQRLKA 187
Query: 387 GQGTSVLQLLRTFERVTG---------NKPVPYIFYNLGTGQGTSVLQL 426
G+ V R F V + + Y+ +G+ S+ +L
Sbjct: 188 GKKCFVTDTRRDFVFVKDLARVVDKALDGIRGHGAYHFSSGEDVSIKEL 236
|
Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307 |
| >gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 527 PVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGW 586
PY YN+G ++ + E+ GK ++GD+ YA+ QR LG+
Sbjct: 253 SAPYRVYNIGNNSPVKLMDFIEALEKALGKKAKKNYLPMQKGDVPETYADISKLQRLLGY 312
Query: 587 SARCTVK 593
+ +++
Sbjct: 313 KPKTSLE 319
|
This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 3e-06
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Query: 260 DLVDKNRLGEIFAKHDIDCVIHFAA-VKAVGESMQEPL-MYYKNNLIATINLLEVMKSHG 317
+L D + ++F +D V+H AA V + + +PL Y K N T L G
Sbjct: 44 ELPDIDSFTDLFL--GVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQG 101
Query: 318 VYQLVFSSSCTVYGEP-QFLPITEDHP 343
V + VF SS V GE P E P
Sbjct: 102 VKRFVFLSSVKVNGEGTVGAPFDETDP 128
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 45/226 (19%), Positives = 76/226 (33%), Gaps = 32/226 (14%)
Query: 256 FYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKS 315
+ DL D + + E + D +I+ AA V + +P + Y+ N++A NL K
Sbjct: 36 LFKLDLTDPDAVEEAIRDYKPDVIINCAAYTRVDKCESDPELAYRVNVLAPENLARAAKE 95
Query: 316 HGVYQLVFSSSCTVY-GEPQFLPITEDHPTGNIKNFYNLGTGQG-TSVLQL------LRT 367
G + S+ V+ G+ P E+ N N Y G +VL LRT
Sbjct: 96 VGARLIHISTDY-VFDGKK--GPYKEEDAP-NPLNVYGKSKLLGEVAVLNANPRYLILRT 151
Query: 368 FERVTGNKPVPYIFYNLGTGQG--TSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQ 425
+++ L G+ +L+L + V + G T
Sbjct: 152 ----------SWLYGELKNGENFVEWMLRLAAERKEVNV--------VHDQIGSPTYAAD 193
Query: 426 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYI 471
L + + Y+L S + + G P I
Sbjct: 194 LADAILELIERNSLTGIYHLSNSGPISKYEFAKLIADALGLPDVEI 239
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 67 IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY-GEPQ 125
D +I+ AA V + +P + Y+ N++A NL K G + S+ V+ G+
Sbjct: 56 PDVIINCAAYTRVDKCESDPELAYRVNVLAPENLARAAKEVGARLIHISTDY-VFDGKK- 113
Query: 126 FLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH 160
P E+ N NVYGK+K E + + + +
Sbjct: 114 -GPYKEEDAP-NPLNVYGKSKLLGEVAVLNANPRY 146
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 6e-06
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 351 YNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 381
YNLGTG+GTSVL+++ FE+ +G K +P
Sbjct: 268 YNLGTGKGTSVLEMVAAFEKASG-KKIPLKL 297
|
Length = 352 |
| >gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 6e-06
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 382 YNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 412
YNLGTG+GTSVL+++ FE+ +G K +P
Sbjct: 268 YNLGTGKGTSVLEMVAAFEKASG-KKIPLKL 297
|
Length = 352 |
| >gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 8e-06
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 260 DLVDKNRLGEIFAKHDIDCVIHFAAV-KAVGESMQEPLMYYKNNLIATINLLEVMKSHGV 318
D++D L EI H I +IH AA+ AVGE + P + + N+ N+LE+ + H
Sbjct: 50 DVLDFKSLEEIVVNHKITWIIHLAALLSAVGE--KNPPLAWDVNMNGLHNVLELAREHN- 106
Query: 319 YQLVFSSSCTVYGE 332
++ S+ +G
Sbjct: 107 LRIFVPSTIGAFGP 120
|
This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 9e-06
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 247 EQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIAT 306
+F K+ F D+ DK RL F + D V H AA+K V P K N++ T
Sbjct: 49 SRFPHDKLRFIIGDVRDKERLRRAFKERGPDIVFHAAALKHVPSMEDNPEEAIKTNVLGT 108
Query: 307 INLLEVMKSHGVYQLVFSSS 326
N+++ +GV + V S+
Sbjct: 109 KNVIDAAIENGVEKFVCIST 128
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 9e-06
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 4/101 (3%)
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 120
A D V H AA ++ Y+ N+ T N+L+ GV ++V +SS
Sbjct: 57 AAAMKGCDRVFHLAAF--TSLWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHTSSIAA 114
Query: 121 YGEPQFLPITED--HPTGNIKNVYGKTKHFIEEMLKDLSKA 159
G P I E N Y ++K E + + +
Sbjct: 115 LGGPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAAE 155
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 1e-05
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 457 LRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 502
L G V YNLG GQG SVL+++ F++V+GK P
Sbjct: 242 LEYLLNGGGSHV----YNLGYGQGFSVLEVIEAFKKVSGKDFPVEL 283
|
Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328 |
| >gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 1e-05
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 260 DLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG 317
D+ D +L + A+ + V H AA V +S +PL ++ N++ T+NLLE +++ G
Sbjct: 60 DIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIG 117
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349 |
| >gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 233 SVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESM 292
+VH+ D + +G+ V F++ DL D L + F + + V H A+ +
Sbjct: 26 TVHVFDIRPTFELDPSSSGR-VQFHTGDLTDPQDLEKAFNEKGPNVVFHTASP----DHG 80
Query: 293 QEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 329
+YYK N+ T N++E + GV +LV++SS +V
Sbjct: 81 SNDDLYYKVNVQGTRNVIEACRKCGVKKLVYTSSASV 117
|
This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 1e-05
Identities = 33/152 (21%), Positives = 48/152 (31%), Gaps = 23/152 (15%)
Query: 9 GTGQ--GTSVLQLLRTFERVTG-----KPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61
TG +LL VT K + + + + D +
Sbjct: 6 ATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVA-VVEGDLRDLDSLSDAV---- 60
Query: 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 121
+D VIH A E ++ T N+LE K GV +F SS Y
Sbjct: 61 ---QGVDVVIHLAGAPRDTRDFCE------VDVEGTRNVLEAAKEAGVKHFIFISSLGAY 111
Query: 122 GEPQFLPITEDHPTGNIKNVYGKTKHFIEEML 153
G+ TE P+ V KT+ + E
Sbjct: 112 GDLH--EETEPSPSSPYLAVKAKTEAVLREAS 141
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 2e-05
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 34/192 (17%)
Query: 64 THDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 123
++D + H A + P+ K N++ T+N+L + K G +++ +S+ VYG+
Sbjct: 62 YLEVDQIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGA-RVLLASTSEVYGD 120
Query: 124 PQFLPITEDH-----PTGNIKNVYGKTKHFIEEMLKDLSKAHK-EWNIISLRYFNPVGA- 176
P+ P E + P G ++ Y + K E + + H + I R FN G
Sbjct: 121 PEVHPQPESYWGNVNPIG-PRSCYDEGKRVAETLCMAYHRQHGVDVRIA--RIFNTYGPR 177
Query: 177 -HPS-GRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETE---------DGTGKVV 225
HP+ GR+ +N ++ Q A+ +P TV+G +T +G +++
Sbjct: 178 MHPNDGRV-------VSN---FIVQ-ALRGEP-ITVYGDGTQTRSFQYVSDLVEGLIRLM 225
Query: 226 AIDNFVNSVHIG 237
D F V++G
Sbjct: 226 NSDYFGGPVNLG 237
|
UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 39/197 (19%), Positives = 76/197 (38%), Gaps = 24/197 (12%)
Query: 51 DLAQKELGWSARCTH----DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKS 106
DL Q LG SA + +D VIH AA ++ ++ N+ T ++LE+
Sbjct: 57 DLTQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNED---AWRTNIDGTEHVLELAAR 113
Query: 107 HGVYQLVFSSSCTVYGEPQ-FLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNI 165
+ + + S+ V G + + TE +P N KN Y ++K E++++ + +
Sbjct: 114 LDIQRFHYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKAEAEQLVRAAATQIP-LTV 172
Query: 166 ISLRYFNPVGAHPSGRIGEDPTKSFTNIM-PYLAQVAIGSKPHFTVFGADYETEDGTGKV 224
PS +G+ T I Y + + + + +
Sbjct: 173 Y----------RPSIVVGDSKTGRIEKIDGLYELLNLLAKLGRWLPMPGN---KGARLNL 219
Query: 225 VAIDNFVNS-VHIGDTP 240
V +D ++ V++ P
Sbjct: 220 VPVDYVADAIVYLSKKP 236
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 3e-05
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 25/128 (19%)
Query: 68 DCVIHFAAVKAVGESMQEPLMYYKN---NLIATINLLEVMKSHGVYQLVFSSSCTVYG-E 123
D V+H AA + ++P +Y++ N++ N+++ K GV +L++ + YG +
Sbjct: 70 DAVVHTAA------AYKDPDDWYEDTLTNVVGGANVVQAAKKAGVKRLIYFQTALCYGLK 123
Query: 124 PQFLPITEDHPTGNIKNVYGKTK----HFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPS 179
P PI DHP + Y +K +++E L + + ++ R N G P
Sbjct: 124 PMQQPIRLDHPRAPPGSSYAISKTAGEYYLE--LSGV-------DFVTFRLANVTG--PR 172
Query: 180 GRIGEDPT 187
IG PT
Sbjct: 173 NVIGPLPT 180
|
Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 3e-05
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Query: 247 EQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIAT 306
+ + + + D+ DK L A D VIH AA+ V K N+ T
Sbjct: 40 DFSKLQVITYIEGDVTDKQDLRR--ALQGSDVVIHTAAIIDVF-GKAYRDTIMKVNVKGT 96
Query: 307 INLLEVMKSHGVYQLVFSSSCTVYG 331
N+L+ GV LV++SS V G
Sbjct: 97 QNVLDACVKAGVRVLVYTSSMEVVG 121
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|182313 PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 4e-05
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 256 FYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKS 315
F D+ D+ L +F +H DCV+H AA V S+ P + + N++ T LLE ++
Sbjct: 55 FEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARA 114
Query: 316 H 316
+
Sbjct: 115 Y 115
|
Length = 355 |
| >gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 5e-05
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 260 DLVDKNRLGEIFAKHDIDCVIHFAA-VKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV 318
DL + + FAK VI AA V + +M P + + NL N+++ HGV
Sbjct: 34 DLTRQADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGV 93
Query: 319 YQLVFSSSCTVYGEPQFLPITE 340
+L+F S +Y + PI E
Sbjct: 94 KKLLFLGSSCIYPKFAPQPIPE 115
|
Length = 306 |
| >gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 7e-05
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 18/131 (13%)
Query: 213 ADYETEDGTGKVVAIDNFVNSVHIGDTPCSIRAIEQFTGK-KVDFYSCDLVDKNRLGEIF 271
D EDG +V+ +DNF G R IE G +F D+ +
Sbjct: 17 CDRLLEDGH-EVICVDNF----FTG----RKRNIEHLIGHPNFEFIRHDVTE-------P 60
Query: 272 AKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331
++D + H A + P+ K N++ T+N+L + K G +++ +S+ VYG
Sbjct: 61 LYLEVDQIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGA-RVLLASTSEVYG 119
Query: 332 EPQFLPITEDH 342
+P+ P E +
Sbjct: 120 DPEVHPQPESY 130
|
UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 7e-05
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLL 310
++ + DL D + L I + D + + AA VG S ++P + I T+ LL
Sbjct: 54 DPRLHLHYGDLTDSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLL 113
Query: 311 EVMKSHGVYQLVF--SSSCTVYGEPQFLPITEDHP 343
E ++ G + F +S+ +YG Q +P E P
Sbjct: 114 EAIRILGEKKTRFYQASTSELYGLVQEIPQKETTP 148
|
Length = 345 |
| >gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 8e-05
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 64 THDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV-YQLVFSSSCTVYG 122
H D V+HFAA V S+ P + + N++ T LLE ++ + ++ S+ VYG
Sbjct: 71 EHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYG 130
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 532 FYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSAR 589
+N+G+G G S+ +L+ E+VTG+ V I R D+ + + A+ ELGWS +
Sbjct: 229 VFNIGSGIGYSLAELIAEIEKVTGRSVQVIYTPARTTDVPKIVLDISRARAELGWSPK 286
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 13/61 (21%), Positives = 27/61 (44%)
Query: 4 KFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63
+ YN+G ++ + E+ GK ++GD+ YA+ Q+ LG+ +
Sbjct: 257 RVYNIGNNSPVKLMDFIEALEKALGKKAKKNYLPMQKGDVPETYADISKLQRLLGYKPKT 316
Query: 64 T 64
+
Sbjct: 317 S 317
|
This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332 |
| >gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 1e-04
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 50 TDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV 109
D+ +EL + D V+HFAA V S+ P + + N++ T LLE + +
Sbjct: 58 GDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWG 117
Query: 110 -YQLVFSSSCTVYGE 123
++ S+ VYG+
Sbjct: 118 KFRFHHISTDEVYGD 132
|
Length = 340 |
| >gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 1e-04
Identities = 44/141 (31%), Positives = 61/141 (43%), Gaps = 22/141 (15%)
Query: 9 GTGQ-GTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQ-KELGWSARCTHD 66
GQ G + +LL + V + R E D+ TD L AR
Sbjct: 6 ANGQLGRELTRLLA------ERGVEVVALDRPELDL------TDPEAVAALVREARP--- 50
Query: 67 IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY-GEPQ 125
D V++ AA AV ++ EP + Y N + NL E + G L+ S+ V+ G
Sbjct: 51 -DVVVNAAAYTAVDKAESEPELAYAVNALGPGNLAEACAARGAP-LIHISTDYVFDGAKG 108
Query: 126 FLPITEDHPTGNIKNVYGKTK 146
P ED PTG + NVYG+TK
Sbjct: 109 -GPYREDDPTGPL-NVYGRTK 127
|
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQ 125
DCV H AA+ +Y++ N+ T N+L+ + GV + V++SS +V Q
Sbjct: 66 GADCVFHTAAI---VPLAGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTSSSSVIFGGQ 122
Query: 126 FLPITEDHPTGNI---KNVYGKTKHFIEEMLK 154
D ++Y +TK E ++
Sbjct: 123 -NIHNGDETLPYPPLDSDMYAETKAIAEIIVL 153
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 5 FYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62
+N+G+G G S+ +L+ E+VTG+ V I R D+ + + A+ ELGWS +
Sbjct: 229 VFNIGSGIGYSLAELIAEIEKVTGRSVQVIYTPARTTDVPKIVLDISRARAELGWSPK 286
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 16/104 (15%)
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 120
R D VIH AA+ V K N+ T N+L+ GV LV++SS V
Sbjct: 61 RRALQGSDVVIHTAAIIDVF-GKAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTSSMEV 119
Query: 121 -----YGEPQF-----LPITEDHPTGNIKNVYGKTKHFIEEMLK 154
YG+P P H ++ Y ++K E+++
Sbjct: 120 VGPNSYGQPIVNGDETTPYESTH-----QDPYPESKALAEKLVL 158
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVYG-EPQ 125
+ V H AA V S ++P+ ++ N++ T+NLLE ++ G V +V +S Y +
Sbjct: 77 EIVFHLAAQPLVRLSYKDPVETFETNVMGTVNLLEAIRETGSVKAVVNVTSDKCYENKEW 136
Query: 126 FLPITEDHPTG 136
E+ P G
Sbjct: 137 GWGYRENDPLG 147
|
This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336 |
| >gnl|CDD|236649 PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 5e-04
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 242 SIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKN 301
+ E++ + D CD + +R IFA+H D V+H AA V S+ P + +
Sbjct: 45 DVSDSERYVFEHADI--CDRAELDR---IFAQHQPDAVMHLAAESHVDRSITGPAAFIET 99
Query: 302 NLIATINLLEVMKSH 316
N++ T LLE +++
Sbjct: 100 NIVGTYVLLEAARNY 114
|
Length = 352 |
| >gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 6e-04
Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 31/121 (25%)
Query: 64 THDIDCVIHFAAVKAVGESMQEPLMYY------KNNLIATINLLEVMKSHGVYQLVF-SS 116
H +D V H AA+K V PL+ Y K N++ T N+ E +GV + V S+
Sbjct: 323 GHKVDIVFHAAALKHV------PLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLIST 376
Query: 117 SCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEW--NIISLRYFNPV 174
V PT NV G TK E++ + ++ +R+ N +
Sbjct: 377 DKAVN------------PT----NVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVL 420
Query: 175 G 175
G
Sbjct: 421 G 421
|
Length = 588 |
| >gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 6e-04
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 68 DCVIHFAA-VKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVF-SSSCTVYGEPQ 125
D VIH AA V + +M P + ++NL+ N++ GV +LVF SSC Y +
Sbjct: 53 DYVIHLAAKVGGIVANMTYPADFLRDNLLINDNVIHAAHRFGVKKLVFLGSSCI-YPDLA 111
Query: 126 FLPITED-------HPTGNIKN-VYGKTKHFIEEMLKDLSKAH 160
PI E PT N Y K ++ + K +
Sbjct: 112 PQPIDESDLLTGPPEPT----NEGYAIAKRAGLKLCEAYRKQY 150
|
GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 6e-04
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Query: 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL 127
D VI+ AA AV ++ EP + + N NL G LV S+ V+ +
Sbjct: 52 DVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGAR-LVHISTDYVFDGEKGG 110
Query: 128 PITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH 160
P E + NVYG++K EE ++ H
Sbjct: 111 PYKETDTPNPL-NVYGRSKLAGEEAVRAAGPRH 142
|
Length = 281 |
| >gnl|CDD|215310 PLN02572, PLN02572, UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 6e-04
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 243 IRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESM---QEPLMYY 299
+R ++ +GK+++ Y D+ D L E F + D V+HF ++ SM +
Sbjct: 104 VRRWKEVSGKEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQ 163
Query: 300 KNNLIATINLLEVMK 314
NN+I T+N+L +K
Sbjct: 164 HNNVIGTLNVLFAIK 178
|
Length = 442 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 7e-04
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 234 VHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQ 293
V D A+ + ++F D+ D+N + + A DCV H AA+
Sbjct: 27 VRSFDIAPPGEALSAWQHPNIEFLKGDITDRNDVEQ--ALSGADCVFHTAAI---VPLAG 81
Query: 294 EPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITED 341
+Y++ N+ T N+L+ + GV + V++SS +V Q D
Sbjct: 82 PRDLYWEVNVGGTQNVLDACQRCGVQKFVYTSSSSVIFGGQ-NIHNGD 128
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.001
Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 6/106 (5%)
Query: 493 VTGKPVPYIFYNLGTGQG-TSVLQLLRTFERVTGKPVPYIFYNLGTGQG-TSVLQLLRTF 550
+ G+P+ I + + V + P + +N+G+G +V +L
Sbjct: 194 LKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGGV-FNIGSGTAEITVRELAEAV 252
Query: 551 ERVTGKPVPYIV--EARREGDIV-SMYANTDLAQRELGWSARCTVK 593
G P IV R GD+ + A+ LGW + +++
Sbjct: 253 AEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALGWEPKVSLE 298
|
Length = 314 |
| >gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein | Back alignment and domain information |
|---|
Score = 40.5 bits (96), Expect = 0.001
Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 31/121 (25%)
Query: 64 THDIDCVIHFAAVKAVGESMQEPLMYY------KNNLIATINLLEVMKSHGVYQLVF-SS 116
H +D V H AA+K V PL+ Y K N++ T N+ E +GV + V S+
Sbjct: 71 QHGVDTVFHAAALKHV------PLVEYNPMEAIKTNVLGTENVAEAAIENGVEKFVLIST 124
Query: 117 SCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEML--KDLSKAHKEWNIISLRYFNPV 174
V PT NV G TK E++ + + +R+ N +
Sbjct: 125 DKAVN------------PT----NVMGATKRLAEKLFQAANRESGSGKTRFSVVRFGNVL 168
Query: 175 G 175
G
Sbjct: 169 G 169
|
This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280 |
| >gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 0.001
Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 22/118 (18%)
Query: 218 EDGTGKVVAIDNFVNSVHIGDTPCSIRAIEQFTG-KKVDFYSCDLVDKNRLGEIFAKH-- 274
E G ++ +DN + +F + D +DK + K
Sbjct: 20 ERGITDILVVDNLRDG-------------HKFLNLADLVIA--DYIDKEDFLDRLEKGAF 64
Query: 275 -DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331
I+ + H A E+ E +M +NN + LL+ G+ +++SS YG
Sbjct: 65 GKIEAIFHQGACSDTTETDGEYMM--ENNYQYSKRLLDWCAEKGI-PFIYASSAATYG 119
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.001
Identities = 34/169 (20%), Positives = 60/169 (35%), Gaps = 32/169 (18%)
Query: 51 DLAQKELGWSA----RCTHDIDCVIHFAAVKAVGESMQEPLMYYKN-NLIATINLLEVMK 105
DL++ LG S ++D +IH AA V + EP + N++ T +L + K
Sbjct: 66 DLSEPNLGLSDEDFQELAEEVDVIIHNAAT--V--NFVEPYSDLRATNVLGTREVLRLAK 121
Query: 106 SHGVYQLVFSSS----CTVYGEPQFLPITEDHPT----GNIKNVYGKTKHFIEEMLKDLS 157
S+ G + P D G + N Y ++K E++++
Sbjct: 122 QMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWLAEQLVR--- 178
Query: 158 KAHKEWNIISLRYFNP--VGAHP-SGRIGEDPTKSFTNIMPYLAQVAIG 203
+A ++ R P + +G I D + P G
Sbjct: 179 EAAGGLPVVIYR---PSIITGESRTGWINGD------DFGPRGLLGGAG 218
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.001
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 242 SIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKN 301
++ F K D S DLV+ + E ID ++HFAA V S + KN
Sbjct: 52 PSKSSPNFKFVKGDIASADLVNYLLITE-----GIDTIMHFAAQTHVDNSFGNSFEFTKN 106
Query: 302 NLIATINLLEVMKSHG-VYQLVFSSSCTVYGE 332
N+ T LLE K G + + + S+ VYGE
Sbjct: 107 NIYGTHVLLEACKVTGQIRRFIHVSTDEVYGE 138
|
Length = 668 |
| >gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.002
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 14/88 (15%)
Query: 65 HDIDCVIHFAAV-KAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 123
H I +IH AA+ AVGE + P + + N+ N+LE+ + H ++ S+ +G
Sbjct: 64 HKITWIIHLAALLSAVGE--KNPPLAWDVNMNGLHNVLELAREHN-LRIFVPSTIGAFG- 119
Query: 124 PQFLPITEDHPTGNI-----KNVYGKTK 146
P T + T + + +YG +K
Sbjct: 120 ----PTTPRNNTPDDTIQRPRTIYGVSK 143
|
This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308 |
| >gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 70 VIHFAA-VKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLP 128
VI AA V + +M P + + NL N+++ HGV +L+F S +Y + P
Sbjct: 53 VILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQP 112
Query: 129 ITE 131
I E
Sbjct: 113 IPE 115
|
Length = 306 |
| >gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.002
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 64 THDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVYG 122
T ID ++HFAA V S + KNN+ T LLE K G + + + S+ VYG
Sbjct: 78 TEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYG 137
Query: 123 EPQFLPITEDH------PTGNIKNVYGKTK 146
E +H PT N Y TK
Sbjct: 138 ETDEDADVGNHEASQLLPT----NPYSATK 163
|
Length = 668 |
| >gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL 127
D V++ AA V + +P + N +A NL HG LV S+ V+
Sbjct: 52 DAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGAR-LVHISTDYVFDGEGKR 110
Query: 128 PITEDHPTGNIKNVYGKTK 146
P ED T + NVYG++K
Sbjct: 111 PYREDDATNPL-NVYGQSK 128
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.003
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 503 YNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIV 562
Y LG G+ S QL T +TG P + + L L R+TGKP +
Sbjct: 223 YILG-GENLSFKQLFETLAEITGVKPPRRTIPPWLLKAVAALSEL--KARLTGKPP---L 276
Query: 563 EARREGDIVS--MYANTDLAQRELGWSAR 589
R ++ ++D A+RELG+S R
Sbjct: 277 LTPRTARVLRRNYLYSSDKARRELGYSPR 305
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.004
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 493 VTGKPVPYIFYNLGTGQGTSVLQ---LLRTFERVTGKPVPYI--FYNLGTGQGTSV--LQ 545
VTGKP+ Y G Q VL L+ + R P +N+G G+ SV L+
Sbjct: 222 VTGKPLTIFGY--GGKQVRDVLHSADLVNLYLRQFQNPDRRKGEVFNIGGGRENSVSLLE 279
Query: 546 LLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSAR 589
L+ E +TG+ + + R GD + ++ + + GW
Sbjct: 280 LIALCEEITGRKMESYKDENRPGDQIWYISDIRKIKEKPGWKPE 323
|
CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.004
Identities = 40/218 (18%), Positives = 69/218 (31%), Gaps = 27/218 (12%)
Query: 258 SCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG 317
D+ D + + E+ + D VI+ AA AV ++ EP + + N NL G
Sbjct: 33 ELDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG 92
Query: 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQG-TSVLQ------LLRTFER 370
LV S+ V+ + P E + N Y G +V +LRT
Sbjct: 93 AR-LVHISTDYVFDGEKGGPYKETDTPNPL-NVYGRSKLAGEEAVRAAGPRHLILRT--- 147
Query: 371 VTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTF 430
+++ G ++L+L + + + G T L
Sbjct: 148 -------SWVYGEYGNNFVKTMLRLAKEGKELKVVDDQ--------YGSPTYTEDLADAI 192
Query: 431 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV 468
+ K Y+L S + + G
Sbjct: 193 LELLEKEKEGGVYHLVNSGECSWYEFAKAIFEEAGVDG 230
|
Length = 281 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 600 | |||
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| KOG1371|consensus | 343 | 100.0 | ||
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.98 | |
| KOG0747|consensus | 331 | 99.97 | ||
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.97 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.97 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.96 | |
| KOG1429|consensus | 350 | 99.95 | ||
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.95 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.95 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.95 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.94 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.94 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.94 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.94 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.94 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.94 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.94 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.94 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.94 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.94 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.94 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.93 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.93 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.93 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.93 | |
| KOG1371|consensus | 343 | 99.92 | ||
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.92 | |
| KOG0747|consensus | 331 | 99.92 | ||
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.92 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.92 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.91 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.91 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.91 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.91 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.91 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.91 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.91 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.9 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.9 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.9 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.9 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.9 | |
| KOG1431|consensus | 315 | 99.9 | ||
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.9 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.9 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.9 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.89 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.89 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.89 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.89 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.89 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.89 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.88 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.88 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.88 | |
| KOG1429|consensus | 350 | 99.88 | ||
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.88 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.88 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.88 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.88 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.88 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.88 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.87 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.87 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.87 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.87 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.86 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.86 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.86 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.85 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.85 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.85 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.85 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.85 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.83 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.83 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.83 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.82 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.82 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.82 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.82 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.81 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.81 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.81 | |
| KOG1430|consensus | 361 | 99.81 | ||
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.81 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.8 | |
| KOG1430|consensus | 361 | 99.8 | ||
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.8 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.79 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.78 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.78 | |
| KOG1431|consensus | 315 | 99.77 | ||
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.77 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.77 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.76 | |
| KOG1502|consensus | 327 | 99.76 | ||
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.76 | |
| KOG1502|consensus | 327 | 99.75 | ||
| KOG1372|consensus | 376 | 99.75 | ||
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.74 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.73 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.72 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.7 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.7 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.68 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.68 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.68 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.67 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.64 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.62 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.61 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.6 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.59 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.59 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.57 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.53 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.52 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.5 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.45 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.43 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.42 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.4 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.38 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.37 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.37 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.34 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.33 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.3 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.29 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.28 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.28 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.27 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.27 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.26 | |
| KOG2774|consensus | 366 | 99.25 | ||
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.23 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.23 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.23 | |
| KOG1372|consensus | 376 | 99.23 | ||
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.23 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.23 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.22 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.22 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.22 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.21 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.21 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.2 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.2 | |
| KOG2774|consensus | 366 | 99.19 | ||
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.19 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.19 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.18 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.18 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.18 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.17 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.17 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.17 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.16 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.16 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.16 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.16 | |
| KOG2865|consensus | 391 | 99.16 | ||
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.16 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.16 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.16 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.15 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.14 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.14 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.14 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.14 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.14 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.13 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.13 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.13 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.13 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.13 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.12 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.12 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.12 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.12 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.12 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.12 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.11 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.11 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.11 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.11 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.1 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.1 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.1 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.09 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.09 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.09 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.09 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.09 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.09 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.09 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.09 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.09 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.09 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.08 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.08 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.08 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.08 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.07 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.07 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.07 | |
| KOG1221|consensus | 467 | 99.07 | ||
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.06 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.05 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.05 | |
| KOG1205|consensus | 282 | 99.05 | ||
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.05 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.05 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.04 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.04 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.03 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.03 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.03 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.02 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.02 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.02 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.02 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.01 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.01 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.01 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.01 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.0 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.0 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.0 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 98.99 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 98.99 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.99 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.99 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 98.99 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.98 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 98.98 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 98.98 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 98.97 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 98.96 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 98.94 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 98.94 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 98.94 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 98.93 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.93 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.92 | |
| KOG2865|consensus | 391 | 98.92 | ||
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 98.92 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.91 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 98.91 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 98.91 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.9 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 98.9 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 98.9 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.9 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.89 | |
| PLN00015 | 308 | protochlorophyllide reductase | 98.88 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 98.88 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 98.87 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.87 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.86 | |
| KOG1201|consensus | 300 | 98.85 | ||
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.85 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 98.84 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.84 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.84 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.84 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.84 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.84 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.83 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.83 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 98.82 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.82 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 98.82 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 98.81 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 98.81 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.81 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 98.81 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 98.81 | |
| KOG1208|consensus | 314 | 98.8 | ||
| PRK05599 | 246 | hypothetical protein; Provisional | 98.79 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 98.78 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 98.78 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 98.77 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 98.73 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 98.72 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 98.72 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 98.72 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 98.71 | |
| KOG1200|consensus | 256 | 98.7 | ||
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 98.7 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 98.69 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 98.69 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 98.68 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 98.67 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 98.66 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.64 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.61 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 98.61 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 98.61 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 98.6 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 98.59 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 98.59 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.59 | |
| KOG0725|consensus | 270 | 98.59 | ||
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 98.56 | |
| KOG1610|consensus | 322 | 98.55 | ||
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 98.55 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.53 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 98.52 | |
| KOG1611|consensus | 249 | 98.52 | ||
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.51 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 98.5 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.49 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.49 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.49 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.46 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 98.44 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.43 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 98.43 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 98.42 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.41 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 98.41 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 98.4 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 98.4 | |
| KOG1221|consensus | 467 | 98.39 | ||
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 98.39 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 98.37 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 98.36 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 98.36 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 98.35 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 98.31 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.31 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 98.3 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 98.3 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 98.3 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.29 | |
| KOG1209|consensus | 289 | 98.28 | ||
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 98.28 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 98.27 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.27 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 98.25 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 98.24 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 98.24 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 98.23 | |
| PF13950 | 62 | Epimerase_Csub: UDP-glucose 4-epimerase C-term sub | 98.22 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.21 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.21 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.21 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 98.21 | |
| PRK05717 | 255 | oxidoreductase; Validated | 98.2 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 98.2 | |
| KOG4039|consensus | 238 | 98.18 | ||
| PRK08264 | 238 | short chain dehydrogenase; Validated | 98.18 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.18 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 98.17 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 98.17 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 98.17 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 98.16 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 98.16 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.13 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.1 | |
| KOG4169|consensus | 261 | 98.1 | ||
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 98.09 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 98.08 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 98.08 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 98.08 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 98.08 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.07 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 98.06 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 98.05 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 98.05 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 98.04 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 98.04 | |
| KOG1210|consensus | 331 | 98.03 | ||
| KOG1207|consensus | 245 | 98.02 | ||
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 98.02 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 98.02 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 97.96 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 97.94 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 97.94 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 97.92 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 97.92 | |
| KOG1204|consensus | 253 | 97.92 | ||
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 97.92 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 97.92 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.91 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 97.91 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 97.91 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 97.9 | |
| KOG3019|consensus | 315 | 97.89 | ||
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 97.89 | |
| KOG4288|consensus | 283 | 97.89 | ||
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.89 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 97.88 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 97.88 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 97.88 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 97.88 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 97.87 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 97.87 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 97.86 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 97.84 | |
| PRK08643 | 256 | acetoin reductase; Validated | 97.84 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 97.84 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 97.83 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 97.83 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 97.82 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 97.82 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 97.82 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.8 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 97.79 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 97.79 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 97.79 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 97.79 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 97.78 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 97.78 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 97.78 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 97.78 | |
| PLN00106 | 323 | malate dehydrogenase | 97.78 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 97.77 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 97.77 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 97.77 | |
| KOG1014|consensus | 312 | 97.76 | ||
| PRK12743 | 256 | oxidoreductase; Provisional | 97.76 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 97.76 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 97.75 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.75 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 97.74 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 97.74 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 97.74 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 97.74 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 97.72 | |
| KOG3019|consensus | 315 | 97.71 | ||
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 97.71 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 97.71 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 97.7 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 97.7 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 97.7 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 97.69 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 97.69 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 97.68 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.68 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 97.65 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 97.65 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 97.64 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 97.62 |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-42 Score=325.02 Aligned_cols=262 Identities=32% Similarity=0.554 Sum_probs=224.7
Q ss_pred eeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCC
Q psy16545 254 VDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP 333 (600)
Q Consensus 254 v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~ 333 (600)
++|+++|+.|.+.+.++|+++++|.|||+||...+.++..+|..++++|+.||.+|+++|+++++++|||.||++|||.+
T Consensus 46 ~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p 125 (329)
T COG1087 46 FKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEP 125 (329)
T ss_pred CceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCCCCcceEEe
Q psy16545 334 QFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFY 413 (600)
Q Consensus 334 ~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 413 (600)
...|++|++|..|. +|||.|| ++.|++++.+.+.+++++++||.||+.+.+.+- .+|..+.+.
T Consensus 126 ~~~PI~E~~~~~p~-NPYG~sK---lm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G----------~iGe~~~~~--- 188 (329)
T COG1087 126 TTSPISETSPLAPI-NPYGRSK---LMSEEILRDAAKANPFKVVILRYFNVAGACPDG----------TLGQRYPGA--- 188 (329)
T ss_pred CCcccCCCCCCCCC-CcchhHH---HHHHHHHHHHHHhCCCcEEEEEecccccCCCCC----------ccCCCCCCc---
Confidence 99999999999986 9999999 999999999999999999999999964433221 012222111
Q ss_pred eCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHH-HHHhCCCCceeec--cCCCCCcccchhhhhhh
Q psy16545 414 NLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF-ERVTGKPVPYIFY--NLGTGQGTSVLQLLRTF 490 (600)
Q Consensus 414 ~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~f 490 (600)
.-++..+ +..+|+...+.++ +|.|.+|+.+ |||
T Consensus 189 ----------------------------------------thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~i----RDY 224 (329)
T COG1087 189 ----------------------------------------TLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCI----RDY 224 (329)
T ss_pred ----------------------------------------chHHHHHHHHHhcCCceeEEeCCCCCCCCCCee----eee
Confidence 1122222 3345554444444 7889999999 999
Q ss_pred hhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCCCCCc
Q psy16545 491 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDI 570 (600)
Q Consensus 491 i~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~ 570 (600)
|||. |+|++| +.|+..+.. .....+||||+|+..|++|+++.+++++|.+++....++|++++
T Consensus 225 IHV~---------DLA~aH-------~~Al~~L~~-~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~RR~GDp 287 (329)
T COG1087 225 IHVD---------DLADAH-------VLALKYLKE-GGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRRAGDP 287 (329)
T ss_pred eehh---------HHHHHH-------HHHHHHHHh-CCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCCCCCCC
Confidence 9988 789998 666776665 33447999999999999999999999999999999999999999
Q ss_pred cccccChHHHHHHcCceeeE-EEE
Q psy16545 571 VSMYANTDLAQRELGWSARC-TVK 593 (600)
Q Consensus 571 ~~~~~d~~k~~~~lG~~p~~-~l~ 593 (600)
..++.|.+|++++|||+|++ +|+
T Consensus 288 a~l~Ad~~kA~~~Lgw~p~~~~L~ 311 (329)
T COG1087 288 AILVADSSKARQILGWQPTYDDLE 311 (329)
T ss_pred ceeEeCHHHHHHHhCCCcccCCHH
Confidence 99999999999999999999 664
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=364.17 Aligned_cols=336 Identities=20% Similarity=0.215 Sum_probs=254.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTHD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~ 66 (600)
.|||++|++|+++.+.....+.+.+++++|+. .+|+.|.+.+.. ++...+
T Consensus 10 LVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~---------~~~~~~ 80 (668)
T PLN02260 10 LITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNY---------LLITEG 80 (668)
T ss_pred EEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHH---------HHhhcC
Confidence 58999999999996643222223444444431 478888877766 444458
Q ss_pred CCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcC-CCeEEEecCccccCCCCCCC---CCCCCCCCCCCChH
Q psy16545 67 IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVYGEPQFLP---ITEDHPTGNIKNVY 142 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~r~I~~SS~~vyg~~~~~~---~~E~~~~~~p~s~Y 142 (600)
+|+|||||+.........++..++++|+.+|.+|+++|++.+ +++||++||..+||.....+ .+|+++. .|.++|
T Consensus 81 ~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~-~p~~~Y 159 (668)
T PLN02260 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQL-LPTNPY 159 (668)
T ss_pred CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCC-CCCCCc
Confidence 999999999876555556677889999999999999999987 89999999999999754332 3677888 788999
Q ss_pred HHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcc
Q psy16545 143 GKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222 (600)
Q Consensus 143 ~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~ 222 (600)
+.||.++|++++.+.+++ +++++++||++||||+.. ...+++.+...+. .+++++++|+|.+.|+|+|
T Consensus 160 ~~sK~~aE~~v~~~~~~~-~l~~vilR~~~VyGp~~~----------~~~~i~~~~~~a~-~g~~i~i~g~g~~~r~~ih 227 (668)
T PLN02260 160 SATKAGAEMLVMAYGRSY-GLPVITTRGNNVYGPNQF----------PEKLIPKFILLAM-QGKPLPIHGDGSNVRSYLY 227 (668)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCEEEECcccccCcCCC----------cccHHHHHHHHHh-CCCCeEEecCCCceEeeEE
Confidence 999999999999988776 999999999999999642 1347777766665 5578889999999999999
Q ss_pred eEEeeeccccccc---------cCCC------------------------------------------------------
Q psy16545 223 KVVAIDNFVNSVH---------IGDT------------------------------------------------------ 239 (600)
Q Consensus 223 v~d~v~~~~~a~~---------~g~~------------------------------------------------------ 239 (600)
++|+++++..+++ +++.
T Consensus 228 V~Dva~a~~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~~lGw~p~~~ 307 (668)
T PLN02260 228 CEDVAEAFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKKLGWQERTS 307 (668)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHHHcCCCCCCC
Confidence 9999888764321 1100
Q ss_pred -cccH---------------------------------------------------------------------------
Q psy16545 240 -PCSI--------------------------------------------------------------------------- 243 (600)
Q Consensus 240 -~~~l--------------------------------------------------------------------------- 243 (600)
.+.+
T Consensus 308 ~~egl~~~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkiLVtG 387 (668)
T PLN02260 308 WEEGLKKTMEWYTSNPDWWGDVSGALLPHPRMLMMPGVRLFDGSEEIKLSSSGSQTGLVVVTKPAGSSPGKPSLKFLIYG 387 (668)
T ss_pred HHHHHHHHHHHHHhChhhhhccccccccCCCcccccccccccchhhhccccccccccccccccccccCCCCCCceEEEEC
Confidence 0000
Q ss_pred -------HHHHhhh--CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccC---ccccccChHHHHHHHHHHHHHHHH
Q psy16545 244 -------RAIEQFT--GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKA---VGESMQEPLMYYKNNLIATINLLE 311 (600)
Q Consensus 244 -------~~~~~l~--~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~---~~~~~~~~~~~~~~Nv~gt~~ll~ 311 (600)
.-.+.+. +..+.+..+|++|...+...+...++|+|||||+... .+.+..++...+++|+.++.+|++
T Consensus 388 a~G~iG~~l~~~L~~~g~~v~~~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~ 467 (668)
T PLN02260 388 RTGWIGGLLGKLCEKQGIAYEYGKGRLEDRSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLAD 467 (668)
T ss_pred CCchHHHHHHHHHHhCCCeEEeeccccccHHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHH
Confidence 0001111 1123345668888888888888788999999999874 334567899999999999999999
Q ss_pred HHHHcCCCEEEEecCcccccCC------CCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHH
Q psy16545 312 VMKSHGVYQLVFSSSCTVYGEP------QFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFE 369 (600)
Q Consensus 312 ~~~~~~~~r~v~~SS~~vYg~~------~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~ 369 (600)
+|++.++ ++|++||.+||+.. ...|++|++++.|+.++||.|| ..+|.+++.+.
T Consensus 468 a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK---~~~E~~~~~~~ 527 (668)
T PLN02260 468 VCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTK---AMVEELLREYD 527 (668)
T ss_pred HHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHH---HHHHHHHHhhh
Confidence 9999998 57788999998742 1347888877666558999999 88999998874
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=283.94 Aligned_cols=259 Identities=25% Similarity=0.378 Sum_probs=223.8
Q ss_pred HHHHHhhhC-CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCC-CE
Q psy16545 243 IRAIEQFTG-KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV-YQ 320 (600)
Q Consensus 243 l~~~~~l~~-~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~r 320 (600)
...++.+.+ ++..|+++||.|...+.+++++..+|+|+|+||...++.++.+|..++++|+.||.+|||+++++.. .|
T Consensus 41 ~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~fr 120 (340)
T COG1088 41 LENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFR 120 (340)
T ss_pred HHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccce
Confidence 344555555 5899999999999999999998889999999999999999999999999999999999999999975 49
Q ss_pred EEEecCcccccCCCCC--CCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHH
Q psy16545 321 LVFSSSCTVYGEPQFL--PITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRT 398 (600)
Q Consensus 321 ~v~~SS~~vYg~~~~~--~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~ 398 (600)
|+|+||..|||.-... .++|++|..|- +||+.|| .+++.+++.|.+.+|++.++.|++|
T Consensus 121 f~HISTDEVYG~l~~~~~~FtE~tp~~Ps-SPYSASK---AasD~lVray~~TYglp~~ItrcSN--------------- 181 (340)
T COG1088 121 FHHISTDEVYGDLGLDDDAFTETTPYNPS-SPYSASK---AASDLLVRAYVRTYGLPATITRCSN--------------- 181 (340)
T ss_pred EEEeccccccccccCCCCCcccCCCCCCC-CCcchhh---hhHHHHHHHHHHHcCCceEEecCCC---------------
Confidence 9999999999975443 68999999985 9999999 7799999999999999999999876
Q ss_pred HHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCC
Q psy16545 399 FERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTG 478 (600)
Q Consensus 399 ~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 478 (600)
+|||++. ..+.+|.. + .+.+.|+|+|+ | |
T Consensus 182 ---------------NYGPyqf-------------pEKlIP~~---------------I--~nal~g~~lpv----Y--G 210 (340)
T COG1088 182 ---------------NYGPYQF-------------PEKLIPLM---------------I--INALLGKPLPV----Y--G 210 (340)
T ss_pred ---------------CcCCCcC-------------chhhhHHH---------------H--HHHHcCCCCce----e--c
Confidence 2556542 22334421 1 24567999998 4 5
Q ss_pred CcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcc
Q psy16545 479 QGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV 558 (600)
Q Consensus 479 ~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~ 558 (600)
+|.++ |||+| |+|-++|+...+.+...|++||||++...+..|+++.+++++|+..
T Consensus 211 dG~~i----RDWl~--------------------VeDh~~ai~~Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~ 266 (340)
T COG1088 211 DGLQI----RDWLY--------------------VEDHCRAIDLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDK 266 (340)
T ss_pred CCcce----eeeEE--------------------eHhHHHHHHHHHhcCcCCceEEeCCCccchHHHHHHHHHHHhCccc
Confidence 66666 89999 7788999999999888899999999999999999999999999877
Q ss_pred c-----ccccCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 559 P-----YIVEARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 559 ~-----~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
+ +.++..|++-.+.+.+|.+|++++|||+|+++||.+
T Consensus 267 ~~~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~fe~G 308 (340)
T COG1088 267 PDYRDLITFVEDRPGHDRRYAIDASKIKRELGWRPQETFETG 308 (340)
T ss_pred cchhhheEeccCCCCCccceeechHHHhhhcCCCcCCCHHHH
Confidence 7 889999999999999999999999999999999863
|
|
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-32 Score=261.14 Aligned_cols=289 Identities=39% Similarity=0.628 Sum_probs=224.0
Q ss_pred eeccccccccCCCcccHHHHHhhhC--CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHH
Q psy16545 227 IDNFVNSVHIGDTPCSIRAIEQFTG--KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLI 304 (600)
Q Consensus 227 v~~~~~a~~~g~~~~~l~~~~~l~~--~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~ 304 (600)
+||+.+.. ..++..+.++.+ +.+.+..+|+.|...++++|+..++|.|+|+|+...++++..+|..++++|+.
T Consensus 32 vDNl~n~~-----~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~ 106 (343)
T KOG1371|consen 32 VDNLNNSY-----LESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIA 106 (343)
T ss_pred Eecccccc-----hhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhh
Confidence 55555442 446677777777 88999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-
Q psy16545 305 ATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN- 383 (600)
Q Consensus 305 gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~- 383 (600)
||.++|+.|++++++.+||+||+.|||.+...|++|++|...+.++||.+| ...|+++..+....+...+.||.|+
T Consensus 107 gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK---~~iE~i~~d~~~~~~~~~~~LRyfn~ 183 (343)
T KOG1371|consen 107 GTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTK---KAIEEIIHDYNKAYGWKVTGLRYFNV 183 (343)
T ss_pred hHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhh---HHHHHHHHhhhccccceEEEEEeccc
Confidence 999999999999999999999999999999999999999983349999999 8899999999999999999999998
Q ss_pred cCCCCcchHHHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEE-cCCCCcccHHHHHHHHHH
Q psy16545 384 LGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYN-LGTGQGTSVLQLLRTFER 462 (600)
Q Consensus 384 ~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n-~~~~~~~~~~~~~~~~~~ 462 (600)
+|.-- +|....++ .-.|. ...|+.... .+..+. +.
T Consensus 184 ~ga~p--------------~Gr~ge~p---~~~~n-----------------nl~p~v~~vaigr~~~----------l~ 219 (343)
T KOG1371|consen 184 IGAHP--------------SGRIGEAP---LGIPN-----------------NLLPYVFQVAIGRRPN----------LQ 219 (343)
T ss_pred cCccc--------------cCccCCCC---ccCcc-----------------cccccccchhhccccc----------ce
Confidence 44110 11111100 01111 112211111 111100 11
Q ss_pred HhCCCCceeeccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCcc
Q psy16545 463 VTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTS 542 (600)
Q Consensus 463 ~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s 542 (600)
+.|.+.+ +.+|+.+ |+|+|+. |++++| +.|+...... ...++||++++...|
T Consensus 220 v~g~d~~-------t~dgt~v----rdyi~v~---------Dla~~h-------~~al~k~~~~-~~~~i~Nlgtg~g~~ 271 (343)
T KOG1371|consen 220 VVGRDYT-------TIDGTIV----RDYIHVL---------DLADGH-------VAALGKLRGA-AEFGVYNLGTGKGSS 271 (343)
T ss_pred eecCccc-------ccCCCee----ecceeeE---------ehHHHH-------HHHhhccccc-hheeeEeecCCCCcc
Confidence 2233433 4566666 9999966 565665 3344433322 235699999999999
Q ss_pred HHHHHHHHhhhcCCcccccccCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 543 VLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 543 ~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
+.|++..+++++|.++++...+.|.++....+.+.++++++|||+|.+++|+.
T Consensus 272 V~~lv~a~~k~~g~~~k~~~v~~R~gdv~~~ya~~~~a~~elgwk~~~~iee~ 324 (343)
T KOG1371|consen 272 VLELVTAFEKALGVKIKKKVVPRRNGDVAFVYANPSKAQRELGWKAKYGLQEM 324 (343)
T ss_pred HHHHHHHHHHHhcCCCCccccCCCCCCceeeeeChHHHHHHhCCccccCHHHH
Confidence 99999999999999999999999999999999999999999999999998753
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.98 E-value=8e-32 Score=256.68 Aligned_cols=203 Identities=39% Similarity=0.617 Sum_probs=185.1
Q ss_pred CCCCcchHHHHHHHhhhccC-----------------CC--ccEEecccccccccChHHhhhHHhhhhcccccccCCCCE
Q psy16545 9 GTGQGTSVLQLLRTFERVTG-----------------KP--VPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDC 69 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~-----------------~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~ 69 (600)
|||+.|++|.+........+ .. .+++ ++|+.|.+.+.+ ++++.++|+
T Consensus 5 VtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~-----~gDi~D~~~L~~---------vf~~~~ida 70 (329)
T COG1087 5 VTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFY-----EGDLLDRALLTA---------VFEENKIDA 70 (329)
T ss_pred EecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceE-----EeccccHHHHHH---------HHHhcCCCE
Confidence 78899999988754322111 01 4666 899999999999 888789999
Q ss_pred EEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q psy16545 70 VIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFI 149 (600)
Q Consensus 70 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~ 149 (600)
|||+||....+.+.++|..++++|+.||.+|+++|+++++++|||.||+.+||.+...|++|+.|. .|.+|||.||++.
T Consensus 71 ViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~-~p~NPYG~sKlm~ 149 (329)
T COG1087 71 VVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPL-APINPYGRSKLMS 149 (329)
T ss_pred EEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCC-CCCCcchhHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999 8999999999999
Q ss_pred HHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeee
Q psy16545 150 EEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAID 228 (600)
Q Consensus 150 e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~ 228 (600)
|++++.+.+.+ ++++++||.+++.|.++.+.+|+.+.+. +.++|.+++.+.|+.+.+.|+|+....+|++.|+|++.
T Consensus 150 E~iL~d~~~a~-~~~~v~LRYFN~aGA~~~G~iGe~~~~~-thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIH 226 (329)
T COG1087 150 EEILRDAAKAN-PFKVVILRYFNVAGACPDGTLGQRYPGA-TLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIH 226 (329)
T ss_pred HHHHHHHHHhC-CCcEEEEEecccccCCCCCccCCCCCCc-chHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeee
Confidence 99999999987 8999999999999999999999999998 99999999999999999999999999999999998875
|
|
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=245.29 Aligned_cols=249 Identities=24% Similarity=0.358 Sum_probs=208.6
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecCcccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~r~v~~SS~~vY 330 (600)
.+..++.+|+.+...+..++...++|.|+|+||...+..+.-++.+...+|+.+|..|+++++.. ++++|||+||..||
T Consensus 57 p~ykfv~~di~~~~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVY 136 (331)
T KOG0747|consen 57 PNYKFVEGDIADADLVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVY 136 (331)
T ss_pred CCceEeeccccchHHHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEeccccee
Confidence 56799999999999999999988999999999999999999999999999999999999999998 58999999999999
Q ss_pred cCCCCCCCC-CCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCCCCcc
Q psy16545 331 GEPQFLPIT-EDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKPVP 409 (600)
Q Consensus 331 g~~~~~~~~-E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~ 409 (600)
|........ |..++.|. ++|+.+| .++|..+++|.++++++++++|..|+
T Consensus 137 Gds~~~~~~~E~s~~nPt-npyAasK---aAaE~~v~Sy~~sy~lpvv~~R~nnV------------------------- 187 (331)
T KOG0747|consen 137 GDSDEDAVVGEASLLNPT-NPYAASK---AAAEMLVRSYGRSYGLPVVTTRMNNV------------------------- 187 (331)
T ss_pred cCccccccccccccCCCC-CchHHHH---HHHHHHHHHHhhccCCcEEEEeccCc-------------------------
Confidence 987655554 88888887 9999999 78999999999999999999996653
Q ss_pred eEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhh
Q psy16545 410 YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRT 489 (600)
Q Consensus 410 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 489 (600)
|||++.. +. .+| .++.. +..+++.++. |+|.+. |+
T Consensus 188 -----YGP~q~~--~k-----------lip---------------kFi~l--~~~~~~~~i~------g~g~~~----rs 222 (331)
T KOG0747|consen 188 -----YGPNQYP--EK-----------LIP---------------KFIKL--AMRGKEYPIH------GDGLQT----RS 222 (331)
T ss_pred -----cCCCcCh--HH-----------HhH---------------HHHHH--HHhCCCccee------cCcccc----ee
Confidence 6777631 11 111 12221 2337777773 666666 99
Q ss_pred hhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCC-------cccccc
Q psy16545 490 FERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK-------PVPYIV 562 (600)
Q Consensus 490 fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~-------~~~~~~ 562 (600)
|+| |+|+++||..+.++...+++||||+...++..|+++.+.++..+ +.-+.+
T Consensus 223 ~l~--------------------veD~~ea~~~v~~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~ 282 (331)
T KOG0747|consen 223 YLY--------------------VEDVSEAFKAVLEKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFF 282 (331)
T ss_pred eEe--------------------HHHHHHHHHHHHhcCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCccee
Confidence 999 89999999999988767999999999999999999999998875 233445
Q ss_pred cCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 563 EARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 563 ~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
.+.|+....++.++.+|+++ |||+|+++++.+
T Consensus 283 v~dRp~nd~Ry~~~~eKik~-LGw~~~~p~~eG 314 (331)
T KOG0747|consen 283 VEDRPYNDLRYFLDDEKIKK-LGWRPTTPWEEG 314 (331)
T ss_pred cCCCCcccccccccHHHHHh-cCCcccCcHHHH
Confidence 66777777778999999995 999999998753
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-30 Score=265.95 Aligned_cols=250 Identities=18% Similarity=0.260 Sum_probs=196.1
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.+...+.++++ ++|+|||+|+......+..++...++.|+.||.+++++|++.++++|||+||++|||
T Consensus 69 ~~~~~~~~Di~d~~~l~~~~~--~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg 146 (348)
T PRK15181 69 SRFIFIQGDIRKFTDCQKACK--NVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYG 146 (348)
T ss_pred CceEEEEccCCCHHHHHHHhh--CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhC
Confidence 357899999999999999888 799999999987666677788899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcce
Q psy16545 332 EPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPY 410 (600)
Q Consensus 332 ~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~ 410 (600)
.....+..|+++..|. ++|+.+| ..+|.+++.|.+.++++++++||++ +||++....
T Consensus 147 ~~~~~~~~e~~~~~p~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~------------------ 204 (348)
T PRK15181 147 DHPDLPKIEERIGRPL-SPYAVTK---YVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNG------------------ 204 (348)
T ss_pred CCCCCCCCCCCCCCCC-ChhhHHH---HHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCC------------------
Confidence 7666677888777665 7999999 8899999999988999999999887 544322110
Q ss_pred EEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhh
Q psy16545 411 IFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF 490 (600)
Q Consensus 411 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f 490 (600)
. ....+..++..+ ..++++++ .|+|.+. |+|
T Consensus 205 ------------------------------------~-~~~~i~~~~~~~--~~~~~i~~------~g~g~~~----rd~ 235 (348)
T PRK15181 205 ------------------------------------A-YSAVIPRWILSL--LKDEPIYI------NGDGSTS----RDF 235 (348)
T ss_pred ------------------------------------c-cccCHHHHHHHH--HcCCCcEE------eCCCCce----Eee
Confidence 0 000022222222 23666554 2555555 999
Q ss_pred hhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC---CceeEeEcCCCCCccHHHHHHHHhhhcCCc------cccc
Q psy16545 491 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP---VPYIFYNLGTGQGTSVLQLLRTFERVTGKP------VPYI 561 (600)
Q Consensus 491 i~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~---~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~------~~~~ 561 (600)
+| |+|+++++..++... ..+++|||++++++|++|+++.+.+.++.. ..+.
T Consensus 236 i~--------------------v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~ 295 (348)
T PRK15181 236 CY--------------------IENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPI 295 (348)
T ss_pred EE--------------------HHHHHHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcc
Confidence 99 889999988766432 247899999999999999999999988731 2334
Q ss_pred ccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 562 VEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 562 ~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+.+.++.+...+.+|++|++++|||+|++|++.
T Consensus 296 ~~~~~~~~~~~~~~d~~k~~~~lGw~P~~sl~e 328 (348)
T PRK15181 296 YKDFRDGDVKHSQADITKIKTFLSYEPEFDIKE 328 (348)
T ss_pred cCCCCCCcccccccCHHHHHHHhCCCCCCCHHH
Confidence 455566667778899999999999999999875
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-30 Score=243.99 Aligned_cols=202 Identities=19% Similarity=0.206 Sum_probs=174.3
Q ss_pred cCCCCcchHHHHHHH-------------------------hhhcc-CCCccEEecccccccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRT-------------------------FERVT-GKPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~-------------------------~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
.|||+.||+|.++.+ +..+. +++..++ ++||.|.+.+.+ +
T Consensus 4 LVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv-----~~DI~D~~~v~~---------~ 69 (340)
T COG1088 4 LVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFV-----QGDICDRELVDR---------L 69 (340)
T ss_pred EEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEE-----eccccCHHHHHH---------H
Confidence 379999999998832 11122 2467888 999999999999 7
Q ss_pred cccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCC-CeEEEecCccccCCCCCC--CCCCCCCCCCC
Q psy16545 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV-YQLVFSSSCTVYGEPQFL--PITEDHPTGNI 138 (600)
Q Consensus 62 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-~r~I~~SS~~vyg~~~~~--~~~E~~~~~~p 138 (600)
+.+.++|+|+|+||....+.+..+|..+.++|+.||.+||+++++... -||+++||..|||..... ..+|++|. .|
T Consensus 70 ~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~-~P 148 (340)
T COG1088 70 FKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPY-NP 148 (340)
T ss_pred HHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCC-CC
Confidence 776789999999999999999999999999999999999999999875 399999999999976443 68999999 99
Q ss_pred CChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccc
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETE 218 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~ 218 (600)
.|||++||++++.+++++.+.+ |++++|.|+++-|||-+. +.+++|+++-.+. .++++|++|+|.|.|
T Consensus 149 sSPYSASKAasD~lVray~~TY-glp~~ItrcSNNYGPyqf----------pEKlIP~~I~nal-~g~~lpvYGdG~~iR 216 (340)
T COG1088 149 SSPYSASKAASDLLVRAYVRTY-GLPATITRCSNNYGPYQF----------PEKLIPLMIINAL-LGKPLPVYGDGLQIR 216 (340)
T ss_pred CCCcchhhhhHHHHHHHHHHHc-CCceEEecCCCCcCCCcC----------chhhhHHHHHHHH-cCCCCceecCCccee
Confidence 9999999999999999999998 999999999999999754 3679996655555 557999999999999
Q ss_pred cCcceEEeeecccccccc
Q psy16545 219 DGTGKVVAIDNFVNSVHI 236 (600)
Q Consensus 219 ~~~~v~d~v~~~~~a~~~ 236 (600)
||+||.|.++++...++.
T Consensus 217 DWl~VeDh~~ai~~Vl~k 234 (340)
T COG1088 217 DWLYVEDHCRAIDLVLTK 234 (340)
T ss_pred eeEEeHhHHHHHHHHHhc
Confidence 999999999988866543
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-28 Score=252.06 Aligned_cols=251 Identities=18% Similarity=0.239 Sum_probs=193.2
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCC---EEEEecCcc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY---QLVFSSSCT 328 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~---r~v~~SS~~ 328 (600)
.+++++.+|++|.+.+.++++..++|+|||+|+......+..++...+++|+.|+.+++++|++.+++ +|||+||.+
T Consensus 55 ~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~ 134 (343)
T TIGR01472 55 ARMKLHYGDLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSE 134 (343)
T ss_pred cceeEEEeccCCHHHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHH
Confidence 45889999999999999999877789999999987655555677788899999999999999998763 899999999
Q ss_pred cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCC
Q psy16545 329 VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKP 407 (600)
Q Consensus 329 vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~ 407 (600)
|||.....+++|+.+..|. ++|+.|| ..+|.+++.+++.++++.+..|+++ +||+.+..+
T Consensus 135 vyg~~~~~~~~E~~~~~p~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~--------------- 195 (343)
T TIGR01472 135 LYGKVQEIPQNETTPFYPR-SPYAAAK---LYAHWITVNYREAYGLFAVNGILFNHESPRRGENF--------------- 195 (343)
T ss_pred hhCCCCCCCCCCCCCCCCC-ChhHHHH---HHHHHHHHHHHHHhCCceEEEeecccCCCCCCccc---------------
Confidence 9997666678999988775 8999999 8899999999998999988888766 444321110
Q ss_pred cceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHH-hCCCCceeeccCCCCCcccchhh
Q psy16545 408 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERV-TGKPVPYIFYNLGTGQGTSVLQL 486 (600)
Q Consensus 408 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~ 486 (600)
+ ...+...+.++ .+++.++.+ |+|.+.
T Consensus 196 ------------------------------~--------------~~~~~~~~~~~~~~~~~~~~~-----g~g~~~--- 223 (343)
T TIGR01472 196 ------------------------------V--------------TRKITRAAAKIKLGLQEKLYL-----GNLDAK--- 223 (343)
T ss_pred ------------------------------c--------------chHHHHHHHHHHcCCCCceee-----CCCccc---
Confidence 0 00011111111 244333321 445544
Q ss_pred hhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccc------
Q psy16545 487 LRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPY------ 560 (600)
Q Consensus 487 ~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~------ 560 (600)
|+|+| |+|+++++..++.++. .++|||++++++|++|+++.+.+.+|.+..+
T Consensus 224 -rd~i~--------------------V~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 281 (343)
T TIGR01472 224 -RDWGH--------------------AKDYVEAMWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGIN 281 (343)
T ss_pred -cCcee--------------------HHHHHHHHHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcCCCccccccccc
Confidence 99999 8899999988887643 4689999999999999999999999965321
Q ss_pred ---------------cccCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 561 ---------------IVEARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 561 ---------------~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
...+.++++...+.+|++|++++|||+|+++++.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~eg 331 (343)
T TIGR01472 282 EVGRCKETGKVHVEIDPRYFRPTEVDLLLGDATKAKEKLGWKPEVSFEKL 331 (343)
T ss_pred ccccccccCceeEEeCccccCCCccchhcCCHHHHHHhhCCCCCCCHHHH
Confidence 11223566777788999999999999999998753
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >KOG1429|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-28 Score=229.86 Aligned_cols=242 Identities=21% Similarity=0.361 Sum_probs=198.4
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
..++.+..|+..+ ++. .+|.|+|||+..++.....+|...+..|+.++.+++-.|++.+ +||+++||+.|||
T Consensus 75 ~~fel~~hdv~~p-----l~~--evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYg 146 (350)
T KOG1429|consen 75 PNFELIRHDVVEP-----LLK--EVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYG 146 (350)
T ss_pred cceeEEEeechhH-----HHH--HhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccC
Confidence 5678888888666 555 7899999999998888889999999999999999999999988 7999999999999
Q ss_pred CCCCCCCCCCC-----CCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCC
Q psy16545 332 EPQFLPITEDH-----PTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGN 405 (600)
Q Consensus 332 ~~~~~~~~E~~-----~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~ 405 (600)
.+...|..|+- |.+| .+.|...| +.+|.++-.|.+..|+.+.+.|++| |||+..-.-++.
T Consensus 147 dp~~hpq~e~ywg~vnpigp-r~cydegK---r~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrv---------- 212 (350)
T KOG1429|consen 147 DPLVHPQVETYWGNVNPIGP-RSCYDEGK---RVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRV---------- 212 (350)
T ss_pred CcccCCCccccccccCcCCc-hhhhhHHH---HHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChh----------
Confidence 98877777775 3344 37899999 8999999999999999999999877 544322111111
Q ss_pred CCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchh
Q psy16545 406 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQ 485 (600)
Q Consensus 406 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 485 (600)
+..+.. ++..++|+++ |++|.++
T Consensus 213 -----------------------------------------------vsnf~~--q~lr~epltv----~g~G~qt---- 235 (350)
T KOG1429|consen 213 -----------------------------------------------VSNFIA--QALRGEPLTV----YGDGKQT---- 235 (350)
T ss_pred -----------------------------------------------hHHHHH--HHhcCCCeEE----EcCCcce----
Confidence 111111 2334788887 4555555
Q ss_pred hhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCC
Q psy16545 486 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEAR 565 (600)
Q Consensus 486 ~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 565 (600)
|+|.| |+|+++++..+++++. .+-||||+++.+|+.|+|+++.++.+....+.+...
T Consensus 236 --RSF~y--------------------vsD~Vegll~Lm~s~~-~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~ 292 (350)
T KOG1429|consen 236 --RSFQY--------------------VSDLVEGLLRLMESDY-RGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVEN 292 (350)
T ss_pred --EEEEe--------------------HHHHHHHHHHHhcCCC-cCCcccCCccceeHHHHHHHHHHHcCCCcceeecCC
Confidence 99999 9999999999998763 446999999999999999999999988888888887
Q ss_pred CCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 566 REGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 566 ~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
.+.+++.+.+|++|+++.|||.|+++|+.+
T Consensus 293 ~~Ddp~kR~pDit~ake~LgW~Pkv~L~eg 322 (350)
T KOG1429|consen 293 GPDDPRKRKPDITKAKEQLGWEPKVSLREG 322 (350)
T ss_pred CCCCccccCccHHHHHHHhCCCCCCcHHHh
Confidence 788999999999999999999999999753
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=245.09 Aligned_cols=251 Identities=17% Similarity=0.181 Sum_probs=193.1
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCC-----EEEEecC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY-----QLVFSSS 326 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~-----r~v~~SS 326 (600)
..++++.+|+.+...+.++++..++|+|||+|+.........++...+++|+.++.+++++|++++++ +||++||
T Consensus 60 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss 139 (340)
T PLN02653 60 ARMKLHYGDLSDASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGS 139 (340)
T ss_pred CceEEEEecCCCHHHHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEecc
Confidence 45889999999999999999876789999999987655556677888899999999999999998875 8999999
Q ss_pred cccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCC
Q psy16545 327 CTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGN 405 (600)
Q Consensus 327 ~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~ 405 (600)
.++||.... +++|+.+..|. ++|+.|| ..+|.+++.++..++++++..|+++ +||+.+..+
T Consensus 140 ~~vyg~~~~-~~~E~~~~~p~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~------------- 201 (340)
T PLN02653 140 SEMYGSTPP-PQSETTPFHPR-SPYAVAK---VAAHWYTVNYREAYGLFACNGILFNHESPRRGENF------------- 201 (340)
T ss_pred HHHhCCCCC-CCCCCCCCCCC-ChhHHHH---HHHHHHHHHHHHHcCCeEEEeeeccccCCCCCccc-------------
Confidence 999997654 78999988875 8999999 8899999999998898888878766 444322110
Q ss_pred CCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchh
Q psy16545 406 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQ 485 (600)
Q Consensus 406 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 485 (600)
++. .+..++..+ ..+++.++. .|+|.+.
T Consensus 202 --------------------------------~~~-----------~~~~~~~~~--~~~~~~~~~-----~g~g~~~-- 229 (340)
T PLN02653 202 --------------------------------VTR-----------KITRAVGRI--KVGLQKKLF-----LGNLDAS-- 229 (340)
T ss_pred --------------------------------chh-----------HHHHHHHHH--HcCCCCceE-----eCCCcce--
Confidence 000 011111122 124444432 1455555
Q ss_pred hhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCc----cccc
Q psy16545 486 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP----VPYI 561 (600)
Q Consensus 486 ~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~----~~~~ 561 (600)
|+|+| ++|+++++..+++... .+.||+++++++|++|+++.+.+.+|.+ ..+.
T Consensus 230 --rd~i~--------------------v~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~ 286 (340)
T PLN02653 230 --RDWGF--------------------AGDYVEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEID 286 (340)
T ss_pred --eccee--------------------HHHHHHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeC
Confidence 99999 8999999999887653 5789999999999999999999999863 2222
Q ss_pred ccCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 562 VEARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 562 ~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
..+.++.+.....+|++|++++|||+|+++++.+
T Consensus 287 ~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~g 320 (340)
T PLN02653 287 PRYFRPAEVDNLKGDASKAREVLGWKPKVGFEQL 320 (340)
T ss_pred cccCCccccccccCCHHHHHHHhCCCCCCCHHHH
Confidence 3333566777788999999999999999998653
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=242.64 Aligned_cols=248 Identities=24% Similarity=0.353 Sum_probs=191.5
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc---------CCCEEE
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH---------GVYQLV 322 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~---------~~~r~v 322 (600)
..++++.+|+.|.+.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++. ++++||
T Consensus 51 ~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i 130 (355)
T PRK10217 51 ERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFH 130 (355)
T ss_pred CceEEEECCCcChHHHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEE
Confidence 35788899999999999999866699999999987655556678899999999999999999863 568999
Q ss_pred EecCcccccCC--CCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHH
Q psy16545 323 FSSSCTVYGEP--QFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTF 399 (600)
Q Consensus 323 ~~SS~~vYg~~--~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~ 399 (600)
++||.++||.. ...+++|+.+..|. +.|+.|| ..+|.+++.+.+.++++++++||++ +||++.... +
T Consensus 131 ~~SS~~vyg~~~~~~~~~~E~~~~~p~-s~Y~~sK---~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~--~---- 200 (355)
T PRK10217 131 HISTDEVYGDLHSTDDFFTETTPYAPS-SPYSASK---ASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEK--L---- 200 (355)
T ss_pred EecchhhcCCCCCCCCCcCCCCCCCCC-ChhHHHH---HHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCccc--H----
Confidence 99999999964 23468899887765 8999999 8899999999989999999999877 444321100 0
Q ss_pred HHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCC
Q psy16545 400 ERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQ 479 (600)
Q Consensus 400 ~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 479 (600)
+..++..+ ..+.++++ + ++
T Consensus 201 -----------------------------------------------------~~~~~~~~--~~~~~~~~----~--g~ 219 (355)
T PRK10217 201 -----------------------------------------------------IPLMILNA--LAGKPLPV----Y--GN 219 (355)
T ss_pred -----------------------------------------------------HHHHHHHH--hcCCCceE----e--CC
Confidence 11111111 22555554 1 44
Q ss_pred cccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcc-
Q psy16545 480 GTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV- 558 (600)
Q Consensus 480 ~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~- 558 (600)
|.+. |+|+| |+|+++++..++.....+++||+++++.+|++|+++.+++.+|...
T Consensus 220 g~~~----~~~i~--------------------v~D~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~ 275 (355)
T PRK10217 220 GQQI----RDWLY--------------------VEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAP 275 (355)
T ss_pred CCee----eCcCc--------------------HHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhccccc
Confidence 5444 89999 9999999998887765678999999999999999999999987421
Q ss_pred -----------cccccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 559 -----------PYIVEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 559 -----------~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
.+.+.+.++.+...+.+|++|++++|||+|+++++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~l~e 322 (355)
T PRK10217 276 NKPQGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFES 322 (355)
T ss_pred ccccccccccccceecCCCCCCCcccccCHHHHHHhcCCCCcCcHHH
Confidence 122233445555677899999999999999998875
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-26 Score=246.67 Aligned_cols=242 Identities=19% Similarity=0.322 Sum_probs=186.6
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.+.. +. ++|+|||+|+.........++...++.|+.++.+++++|+++++ +|||+||.+|||
T Consensus 168 ~~~~~~~~Di~~~~-----~~--~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg 239 (436)
T PLN02166 168 PRFELIRHDVVEPI-----LL--EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYG 239 (436)
T ss_pred CceEEEECcccccc-----cc--CCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhC
Confidence 35788888887653 33 78999999997655455568889999999999999999999985 999999999999
Q ss_pred CCCCCCCCCCC-----CCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCCC
Q psy16545 332 EPQFLPITEDH-----PTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNK 406 (600)
Q Consensus 332 ~~~~~~~~E~~-----~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~ 406 (600)
.....+.+|+. |..|. +.|+.+| ..+|.+++.+.+.++++++++|++++
T Consensus 240 ~~~~~p~~E~~~~~~~p~~p~-s~Yg~SK---~~aE~~~~~y~~~~~l~~~ilR~~~v---------------------- 293 (436)
T PLN02166 240 DPLEHPQKETYWGNVNPIGER-SCYDEGK---RTAETLAMDYHRGAGVEVRIARIFNT---------------------- 293 (436)
T ss_pred CCCCCCCCccccccCCCCCCC-CchHHHH---HHHHHHHHHHHHHhCCCeEEEEEccc----------------------
Confidence 87666778874 44443 7899999 88999999999989999999998872
Q ss_pred CcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhh
Q psy16545 407 PVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQL 486 (600)
Q Consensus 407 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 486 (600)
|||++... ....+..++..+. .++++++ + |++.+.
T Consensus 294 --------YGp~~~~~--------------------------~~~~i~~~i~~~l--~~~~i~v----~--g~g~~~--- 328 (436)
T PLN02166 294 --------YGPRMCLD--------------------------DGRVVSNFVAQTI--RKQPMTV----Y--GDGKQT--- 328 (436)
T ss_pred --------cCCCCCCC--------------------------ccchHHHHHHHHh--cCCCcEE----e--CCCCeE---
Confidence 34432100 0000111222221 2555544 2 445544
Q ss_pred hhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCC
Q psy16545 487 LRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARR 566 (600)
Q Consensus 487 ~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~ 566 (600)
|+|+| |+|+++++..+++.. ..++||+++++.+|++|+++.+++.+|.+.++.+.+.+
T Consensus 329 -rdfi~--------------------V~Dva~ai~~~~~~~-~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~ 386 (436)
T PLN02166 329 -RSFQY--------------------VSDLVDGLVALMEGE-HVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNT 386 (436)
T ss_pred -EeeEE--------------------HHHHHHHHHHHHhcC-CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCC
Confidence 89999 889999999888654 35699999999999999999999999987777777766
Q ss_pred CCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 567 EGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 567 ~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
..+.....+|++|++++|||+|+++++.
T Consensus 387 ~~~~~~~~~d~~Ka~~~LGw~P~~sl~e 414 (436)
T PLN02166 387 ADDPHKRKPDISKAKELLNWEPKISLRE 414 (436)
T ss_pred CCCccccccCHHHHHHHcCCCCCCCHHH
Confidence 6777778899999999999999998864
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-26 Score=233.85 Aligned_cols=249 Identities=20% Similarity=0.318 Sum_probs=187.0
Q ss_pred EeecCChhhHHHHhhcCCccEEEEcccccCc-cccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCCC
Q psy16545 258 SCDLVDKNRLGEIFAKHDIDCVIHFAAVKAV-GESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL 336 (600)
Q Consensus 258 ~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~-~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~ 336 (600)
.+|+.+...+.++++..++|+|||+|+.... ..+..++..+++.|+.++.+++++|++++++||||+||..|||.....
T Consensus 32 ~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~ 111 (306)
T PLN02725 32 ELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQ 111 (306)
T ss_pred cCCCCCHHHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCC
Confidence 4799999999999887789999999998542 234467888999999999999999999999999999999999977677
Q ss_pred CCCCCC----CCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceE
Q psy16545 337 PITEDH----PTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYI 411 (600)
Q Consensus 337 ~~~E~~----~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 411 (600)
+++|++ +..|...+|+.+| ..+|.+++.+.+.++++++++||+. +|+++.-.
T Consensus 112 ~~~E~~~~~~~~~p~~~~Y~~sK---~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~-------------------- 168 (306)
T PLN02725 112 PIPETALLTGPPEPTNEWYAIAK---IAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFH-------------------- 168 (306)
T ss_pred CCCHHHhccCCCCCCcchHHHHH---HHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCC--------------------
Confidence 899987 3444333599999 7889999999988899999999876 54432100
Q ss_pred EeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHH--HHhCCCCceeeccCCCCCcccchhhhhh
Q psy16545 412 FYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFE--RVTGKPVPYIFYNLGTGQGTSVLQLLRT 489 (600)
Q Consensus 412 ~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 489 (600)
+. ....+..++..+. ...+.++++. .+.|.+. |+
T Consensus 169 -----~~------------------------------~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~g~~~----~~ 204 (306)
T PLN02725 169 -----PE------------------------------NSHVIPALIRRFHEAKANGAPEVVV-----WGSGSPL----RE 204 (306)
T ss_pred -----CC------------------------------CCcccHHHHHHHHHHhhcCCCeEEE-----cCCCCee----ec
Confidence 00 0000112222221 1224444432 1444444 88
Q ss_pred hhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCCCCC
Q psy16545 490 FERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGD 569 (600)
Q Consensus 490 fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~ 569 (600)
|+| ++|+++++..++......+.||+++++.+|+.|+++.+++.+|.+..+...+.+...
T Consensus 205 ~i~--------------------v~Dv~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~ 264 (306)
T PLN02725 205 FLH--------------------VDDLADAVVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTSKPDG 264 (306)
T ss_pred ccc--------------------HHHHHHHHHHHHhccccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeecCCCCCc
Confidence 988 889999999888765456789999999999999999999999976666555555555
Q ss_pred ccccccChHHHHHHcCceeeEEEEe
Q psy16545 570 IVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 570 ~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
.....+|++|+++ |||+|+++++.
T Consensus 265 ~~~~~~d~~k~~~-lg~~p~~~~~~ 288 (306)
T PLN02725 265 TPRKLMDSSKLRS-LGWDPKFSLKD 288 (306)
T ss_pred ccccccCHHHHHH-hCCCCCCCHHH
Confidence 5567789999975 99999998864
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-26 Score=242.08 Aligned_cols=257 Identities=24% Similarity=0.324 Sum_probs=182.3
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccCh---HHHHHHHHHHHHHHHHHHHHcCCC-EEEEecC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEP---LMYYKNNLIATINLLEVMKSHGVY-QLVFSSS 326 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~---~~~~~~Nv~gt~~ll~~~~~~~~~-r~v~~SS 326 (600)
+.+++++.+|+.|.+.+.++++..++|+|||+|+......+..++ ...++.|+.|+.+++++|++.+++ +||++||
T Consensus 112 ~~~v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS 191 (442)
T PLN02572 112 GKEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGT 191 (442)
T ss_pred CCcceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEec
Confidence 456899999999999999999877799999999875544444444 455789999999999999999985 9999999
Q ss_pred cccccCCCCCCCCC-----------CC---CCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcch
Q psy16545 327 CTVYGEPQFLPITE-----------DH---PTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTS 391 (600)
Q Consensus 327 ~~vYg~~~~~~~~E-----------~~---~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~ 391 (600)
.+|||... .+++| +. +..| .++|+.|| ..+|.+++.+++.++++++++|+++ |||++...
T Consensus 192 ~~vYG~~~-~~~~E~~i~~~~~~~e~~~~~~~~P-~s~Yg~SK---~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~ 266 (442)
T PLN02572 192 MGEYGTPN-IDIEEGYITITHNGRTDTLPYPKQA-SSFYHLSK---VHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDET 266 (442)
T ss_pred ceecCCCC-CCCcccccccccccccccccCCCCC-CCcchhHH---HHHHHHHHHHHHhcCCCEEEEecccccCCCCccc
Confidence 99999643 23332 22 3444 37999999 7789999999999999999999887 55543221
Q ss_pred HHHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEc-CCCC-cccHHHHHHHHHHHhCCCCc
Q psy16545 392 VLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNL-GTGQ-GTSVLQLLRTFERVTGKPVP 469 (600)
Q Consensus 392 ~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~-~~~~-~~~~~~~~~~~~~~~~~~~~ 469 (600)
...|.++... ..+. ...+..++..+ ..|++++
T Consensus 267 --------------------------------------------~~~~~li~~~~~~~~~~~~i~~~~~~~--~~g~~i~ 300 (442)
T PLN02572 267 --------------------------------------------MMDEELINRLDYDGVFGTALNRFCVQA--AVGHPLT 300 (442)
T ss_pred --------------------------------------------ccccccccccCcccchhhHHHHHHHHH--hcCCCce
Confidence 0001110000 0000 00011122111 2366655
Q ss_pred eeeccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCC-c--eeEeEcCCCCCccHHHH
Q psy16545 470 YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV-P--YIFYNLGTGQGTSVLQL 546 (600)
Q Consensus 470 ~~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~-~--~~~~nl~~~~~~s~~e~ 546 (600)
+ + |+|.+. |||+| |+|+++++..+++... . ..+||+++ +.+|++|+
T Consensus 301 v----~--g~G~~~----Rdfi~--------------------V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el 349 (442)
T PLN02572 301 V----Y--GKGGQT----RGFLD--------------------IRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNEL 349 (442)
T ss_pred e----c--CCCCEE----ECeEE--------------------HHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHH
Confidence 5 2 455555 99999 8899999988887532 2 36899986 68999999
Q ss_pred HHHHhhh---cCCcccccccCC--CCCCccccccChHHHHHHcCceeeE
Q psy16545 547 LRTFERV---TGKPVPYIVEAR--REGDIVSMYANTDLAQRELGWSARC 590 (600)
Q Consensus 547 ~~~~~~~---~g~~~~~~~~~~--~~~~~~~~~~d~~k~~~~lG~~p~~ 590 (600)
++++++. +|.+.++.+.+. +..+.....+|++|+++ |||+|++
T Consensus 350 ~~~i~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~-LGw~p~~ 397 (442)
T PLN02572 350 AKLVTKAGEKLGLDVEVISVPNPRVEAEEHYYNAKHTKLCE-LGLEPHL 397 (442)
T ss_pred HHHHHHHHHhhCCCCCeeeCCCCcccccccccCccHHHHHH-cCCCCCC
Confidence 9999999 887766655543 34445577789999986 9999988
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-26 Score=241.82 Aligned_cols=204 Identities=22% Similarity=0.237 Sum_probs=163.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------------cccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------------EGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------------~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
-|||++|++|+++.+.. ...+.+++++|+. .+|+.|.+.+.+ +
T Consensus 19 lVtGatGfiG~~lv~~L--~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~---------~ 87 (348)
T PRK15181 19 LITGVAGFIGSGLLEEL--LFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQK---------A 87 (348)
T ss_pred EEECCccHHHHHHHHHH--HHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHH---------H
Confidence 58999999999996533 2222333333321 679988888777 6
Q ss_pred cccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 62 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
++ ++|+|||+|+.........++...+++|+.||.+|+++|++.++++|||+||+++||.....+..|+.+. .|.++
T Consensus 88 ~~--~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~-~p~~~ 164 (348)
T PRK15181 88 CK--NVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIG-RPLSP 164 (348)
T ss_pred hh--CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCC-CCCCh
Confidence 66 6999999999876555567788899999999999999999999999999999999997666677888888 89999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCc
Q psy16545 142 YGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGT 221 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~ 221 (600)
|+.||..+|++++.+.+++ +++++++||++||||++.+ .+....+++.+...+. .++++.++|+|.+.|+|+
T Consensus 165 Y~~sK~~~e~~~~~~~~~~-~~~~~~lR~~~vyGp~~~~------~~~~~~~i~~~~~~~~-~~~~i~~~g~g~~~rd~i 236 (348)
T PRK15181 165 YAVTKYVNELYADVFARSY-EFNAIGLRYFNVFGRRQNP------NGAYSAVIPRWILSLL-KDEPIYINGDGSTSRDFC 236 (348)
T ss_pred hhHHHHHHHHHHHHHHHHh-CCCEEEEEecceeCcCCCC------CCccccCHHHHHHHHH-cCCCcEEeCCCCceEeeE
Confidence 9999999999999988776 9999999999999997532 1112457777665555 456788899999999999
Q ss_pred ceEEeeeccccc
Q psy16545 222 GKVVAIDNFVNS 233 (600)
Q Consensus 222 ~v~d~v~~~~~a 233 (600)
|++|+++++..+
T Consensus 237 ~v~D~a~a~~~~ 248 (348)
T PRK15181 237 YIENVIQANLLS 248 (348)
T ss_pred EHHHHHHHHHHH
Confidence 999999876644
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=233.56 Aligned_cols=262 Identities=38% Similarity=0.631 Sum_probs=195.6
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.++..+..+++..++|+|||+|+.........++...++.|+.++.+++++|++.++++||++||..+||
T Consensus 58 ~~~~~~~~D~~~~~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg 137 (352)
T PLN02240 58 DNLVFHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYG 137 (352)
T ss_pred ccceEEecCcCCHHHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhC
Confidence 45788999999999999988766799999999976555556688899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH-hCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcc
Q psy16545 332 EPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV-TGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVP 409 (600)
Q Consensus 332 ~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~-~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~ 409 (600)
.....+++|+.+..|. +.|+.+| ..+|.+++.+... .+++++++|+++ +|+....
T Consensus 138 ~~~~~~~~E~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~------------------- 194 (352)
T PLN02240 138 QPEEVPCTEEFPLSAT-NPYGRTK---LFIEEICRDIHASDPEWKIILLRYFNPVGAHPSG------------------- 194 (352)
T ss_pred CCCCCCCCCCCCCCCC-CHHHHHH---HHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccc-------------------
Confidence 7777789999988875 8999999 7899999988765 578899999877 4432111
Q ss_pred eEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHH-hCCCCceeecc--CCCCCcccchhh
Q psy16545 410 YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERV-TGKPVPYIFYN--LGTGQGTSVLQL 486 (600)
Q Consensus 410 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~g~~~~~~~~ 486 (600)
.||+..... + ..++..+.+. .+...++.+++ +..++|.+.
T Consensus 195 ----~~g~~~~~~----------------~--------------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~--- 237 (352)
T PLN02240 195 ----RIGEDPKGI----------------P--------------NNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGV--- 237 (352)
T ss_pred ----cccCCCCCC----------------c--------------chHHHHHHHHHhCCCCceEEeCCCCCCCCCCEE---
Confidence 122210000 0 0011111111 12222222211 112355555
Q ss_pred hhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCC-----CCceeEeEcCCCCCccHHHHHHHHhhhcCCccccc
Q psy16545 487 LRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK-----PVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYI 561 (600)
Q Consensus 487 ~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~-----~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~ 561 (600)
|+|+| ++|+++++..++.. ...+++||+++++++|++|+++.+.+.+|.+.++.
T Consensus 238 -~~~i~--------------------v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~ 296 (352)
T PLN02240 238 -RDYIH--------------------VMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLK 296 (352)
T ss_pred -EeeEE--------------------HHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCce
Confidence 89999 77888777666542 22358999999999999999999999999887777
Q ss_pred ccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 562 VEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 562 ~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
..+.++.+...+..|++|++++|||+|+++++.
T Consensus 297 ~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~l~~ 329 (352)
T PLN02240 297 LAPRRPGDAEEVYASTEKAEKELGWKAKYGIDE 329 (352)
T ss_pred eCCCCCCChhhhhcCHHHHHHHhCCCCCCCHHH
Confidence 777767777777889999999999999998865
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.3e-26 Score=235.58 Aligned_cols=255 Identities=18% Similarity=0.323 Sum_probs=185.1
Q ss_pred CceeEEEeecC-ChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 252 KKVDFYSCDLV-DKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~-~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
..++++.+|+. +...+.++++ ++|+|||+|+.........+|...++.|+.++.+++++|++.+ +||||+||..||
T Consensus 46 ~~~~~~~~Dl~~~~~~~~~~~~--~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vy 122 (347)
T PRK11908 46 PRMHFFEGDITINKEWIEYHVK--KCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVY 122 (347)
T ss_pred CCeEEEeCCCCCCHHHHHHHHc--CCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceee
Confidence 45889999997 6777777777 7999999999865555667888999999999999999999988 799999999999
Q ss_pred cCCCCCCCCCCCCC------CCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHh
Q psy16545 331 GEPQFLPITEDHPT------GNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVT 403 (600)
Q Consensus 331 g~~~~~~~~E~~~~------~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~ 403 (600)
|.....+++|+.+. ..+.++|+.+| ..+|.+++.+...++++++++||++ +||+....
T Consensus 123 g~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK---~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~------------ 187 (347)
T PRK11908 123 GMCPDEEFDPEASPLVYGPINKPRWIYACSK---QLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSI------------ 187 (347)
T ss_pred ccCCCcCcCccccccccCcCCCccchHHHHH---HHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCC------------
Confidence 97655567776532 12236899999 8899999999988999999999887 55432210
Q ss_pred CCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccc
Q psy16545 404 GNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSV 483 (600)
Q Consensus 404 g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 483 (600)
+.+.. +....+..++..+ ..++++.+ .+.|.+.
T Consensus 188 -----------~~~~~----------------------------~~~~~i~~~~~~~--~~~~~~~~------~~~g~~~ 220 (347)
T PRK11908 188 -----------YTPKE----------------------------GSSRVVTQFLGHI--VRGEPISL------VDGGSQK 220 (347)
T ss_pred -----------Ccccc----------------------------CCcchHHHHHHHH--hCCCceEE------ecCCcee
Confidence 00000 0000122222222 23555544 1445555
Q ss_pred hhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC---CceeEeEcCCC-CCccHHHHHHHHhhhcCCccc
Q psy16545 484 LQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP---VPYIFYNLGTG-QGTSVLQLLRTFERVTGKPVP 559 (600)
Q Consensus 484 ~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~---~~~~~~nl~~~-~~~s~~e~~~~~~~~~g~~~~ 559 (600)
|+|+| ++|+++++..+++++ ..+++||++++ ..+|++|+++.+.+.+|....
T Consensus 221 ----r~~i~--------------------v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~ 276 (347)
T PRK11908 221 ----RAFTD--------------------IDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPE 276 (347)
T ss_pred ----ecccc--------------------HHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCccc
Confidence 89999 889999998888764 34789999997 589999999999999885322
Q ss_pred c---------cccCC------CCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 560 Y---------IVEAR------REGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 560 ~---------~~~~~------~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
+ ...+. ...+...+..|++|+++.|||+|+++++.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~~ 327 (347)
T PRK11908 277 YAESAKKVKLVETTSGAYYGKGYQDVQNRVPKIDNTMQELGWAPKTTMDDA 327 (347)
T ss_pred ccccccccccccCCchhccCcCcchhccccCChHHHHHHcCCCCCCcHHHH
Confidence 2 11111 112334667799999999999999998753
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-26 Score=240.65 Aligned_cols=242 Identities=20% Similarity=0.326 Sum_probs=185.3
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
..+++++.+|+.++. +. ++|+|||+|+.........++...++.|+.++.+|+++|++.++ ||||+||..||
T Consensus 166 ~~~~~~i~~D~~~~~-----l~--~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VY 237 (442)
T PLN02206 166 NPNFELIRHDVVEPI-----LL--EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY 237 (442)
T ss_pred CCceEEEECCccChh-----hc--CCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHh
Confidence 346788889987653 33 68999999997655445568889999999999999999999986 99999999999
Q ss_pred cCCCCCCCCCCC-----CCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhC
Q psy16545 331 GEPQFLPITEDH-----PTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTG 404 (600)
Q Consensus 331 g~~~~~~~~E~~-----~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g 404 (600)
|.....+.+|+. |..+ .+.|+.+| ..+|.++..|.+.++++++++|+++ +||+.......
T Consensus 238 g~~~~~p~~E~~~~~~~P~~~-~s~Y~~SK---~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~---------- 303 (442)
T PLN02206 238 GDPLQHPQVETYWGNVNPIGV-RSCYDEGK---RTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGR---------- 303 (442)
T ss_pred CCCCCCCCCccccccCCCCCc-cchHHHHH---HHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccc----------
Confidence 977666777774 3333 47899999 8899999999988999999999887 44432100000
Q ss_pred CCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccch
Q psy16545 405 NKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVL 484 (600)
Q Consensus 405 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 484 (600)
.+..++..+ ..++++++ + ++|.+.
T Consensus 304 -----------------------------------------------~v~~~i~~~--l~~~~i~i----~--g~G~~~- 327 (442)
T PLN02206 304 -----------------------------------------------VVSNFVAQA--LRKEPLTV----Y--GDGKQT- 327 (442)
T ss_pred -----------------------------------------------hHHHHHHHH--HcCCCcEE----e--CCCCEE-
Confidence 011111111 22556554 2 445544
Q ss_pred hhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccC
Q psy16545 485 QLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEA 564 (600)
Q Consensus 485 ~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 564 (600)
|+|+| |+|+++++..+++.. ..++|||++++.+|++|+++.+++.+|.+..+.+.+
T Consensus 328 ---rdfi~--------------------V~Dva~ai~~a~e~~-~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p 383 (442)
T PLN02206 328 ---RSFQF--------------------VSDLVEGLMRLMEGE-HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRP 383 (442)
T ss_pred ---EeEEe--------------------HHHHHHHHHHHHhcC-CCceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCC
Confidence 89999 899999999888754 356999999999999999999999998776676666
Q ss_pred CCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 565 RREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 565 ~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
.+..+.....+|++|++++|||+|+++|+.
T Consensus 384 ~~~~~~~~~~~d~sKa~~~LGw~P~~~l~e 413 (442)
T PLN02206 384 NTEDDPHKRKPDITKAKELLGWEPKVSLRQ 413 (442)
T ss_pred CCCCCccccccCHHHHHHHcCCCCCCCHHH
Confidence 666666778899999999999999999875
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.9e-26 Score=237.94 Aligned_cols=257 Identities=19% Similarity=0.276 Sum_probs=181.5
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.|...+.+++. ++|+|||+|+.........++...+..|+.++.+++++|++.+ +||||+||.+|||
T Consensus 65 ~~~~~~~~Dl~d~~~l~~~~~--~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg 141 (386)
T PLN02427 65 GRIQFHRINIKHDSRLEGLIK--MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYG 141 (386)
T ss_pred CCeEEEEcCCCChHHHHHHhh--cCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeC
Confidence 368999999999999999888 7899999999765444445677788899999999999999887 8999999999999
Q ss_pred CCCCCCCCCCCCCC---------------------CCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCc
Q psy16545 332 EPQFLPITEDHPTG---------------------NIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQG 389 (600)
Q Consensus 332 ~~~~~~~~E~~~~~---------------------~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~ 389 (600)
.....+++|+.|.. .+.+.|+.+| ..+|.+++.+.+.++++++++||++ +||+..
T Consensus 142 ~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK---~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~ 218 (386)
T PLN02427 142 KTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAK---QLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 218 (386)
T ss_pred CCcCCCCCcccccccccccccccccccccccCCCCccccchHHHH---HHHHHHHHHHHhhcCCceEEecccceeCCCCC
Confidence 75433344443321 1135799999 8899999999988999999999887 554321
Q ss_pred chHHHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCc
Q psy16545 390 TSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP 469 (600)
Q Consensus 390 ~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (600)
... . .+|+... ++ ..+..++..+ ..++++.
T Consensus 219 ~~~-----------------~---~~~~~~~-----------------~~-----------~~i~~~~~~~--~~~~~~~ 248 (386)
T PLN02427 219 FIP-----------------G---IDGPSEG-----------------VP-----------RVLACFSNNL--LRREPLK 248 (386)
T ss_pred ccc-----------------c---ccccccc-----------------cc-----------hHHHHHHHHH--hcCCCeE
Confidence 100 0 0011000 00 0011111111 2355555
Q ss_pred eeeccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC--CceeEeEcCCC-CCccHHHH
Q psy16545 470 YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP--VPYIFYNLGTG-QGTSVLQL 546 (600)
Q Consensus 470 ~~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~--~~~~~~nl~~~-~~~s~~e~ 546 (600)
+. ++|.+. |+|+| |+|+++++..+++++ ..+++||++++ +.+|++|+
T Consensus 249 ~~------g~g~~~----r~~i~--------------------V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el 298 (386)
T PLN02427 249 LV------DGGQSQ----RTFVY--------------------IKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQL 298 (386)
T ss_pred EE------CCCCce----ECcEe--------------------HHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHH
Confidence 42 444444 89999 899999999888764 24689999997 69999999
Q ss_pred HHHHhhhcCCcc--c---c--cccCC------CCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 547 LRTFERVTGKPV--P---Y--IVEAR------REGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 547 ~~~~~~~~g~~~--~---~--~~~~~------~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
++++.+.+|... + . ...+. +..+....++|++|++++|||+|+++|+.
T Consensus 299 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~ 359 (386)
T PLN02427 299 AEMMTEVYAKVSGEPALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWD 359 (386)
T ss_pred HHHHHHHhccccccccccccccccCcccccCccccchhhccCCHHHHHHhcCCCcCccHHH
Confidence 999999988411 0 1 11111 11345677889999999999999999875
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=234.26 Aligned_cols=249 Identities=24% Similarity=0.337 Sum_probs=188.5
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc---------CCCEEE
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH---------GVYQLV 322 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~---------~~~r~v 322 (600)
..++++.+|+.|.+.+.++++..++|+|||+|+.........++...++.|+.++.+++++|++. ++++||
T Consensus 50 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i 129 (352)
T PRK10084 50 ERYVFEHADICDRAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFH 129 (352)
T ss_pred CceEEEEecCCCHHHHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEE
Confidence 35788999999999999999866799999999986544455677889999999999999999874 467999
Q ss_pred EecCcccccCCC---------C-CCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchH
Q psy16545 323 FSSSCTVYGEPQ---------F-LPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSV 392 (600)
Q Consensus 323 ~~SS~~vYg~~~---------~-~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~ 392 (600)
|+||.++||... . .+++|+++..|. +.|+.|| ..+|.+++.+++.++++++++|++++
T Consensus 130 ~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~-~~Y~~sK---~~~E~~~~~~~~~~g~~~vilr~~~v-------- 197 (352)
T PRK10084 130 HISTDEVYGDLPHPDEVENSEELPLFTETTAYAPS-SPYSASK---ASSDHLVRAWLRTYGLPTIVTNCSNN-------- 197 (352)
T ss_pred EecchhhcCCCCccccccccccCCCccccCCCCCC-ChhHHHH---HHHHHHHHHHHHHhCCCEEEEeccce--------
Confidence 999999999632 1 136888887775 8999999 88999999999889999999997762
Q ss_pred HHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceee
Q psy16545 393 LQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 472 (600)
Q Consensus 393 ~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (600)
|||++... . .+..++..+ ..+.++++
T Consensus 198 ----------------------~Gp~~~~~---------------------------~-~~~~~~~~~--~~~~~~~~-- 223 (352)
T PRK10084 198 ----------------------YGPYHFPE---------------------------K-LIPLVILNA--LEGKPLPI-- 223 (352)
T ss_pred ----------------------eCCCcCcc---------------------------c-hHHHHHHHH--hcCCCeEE--
Confidence 34432100 0 011111111 12445444
Q ss_pred ccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhh
Q psy16545 473 YNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFER 552 (600)
Q Consensus 473 ~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~ 552 (600)
+ ++|.+. |+|+| ++|+++++..+++....+++||+++++.+|++|+++.+++
T Consensus 224 --~--~~g~~~----~~~v~--------------------v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~ 275 (352)
T PRK10084 224 --Y--GKGDQI----RDWLY--------------------VEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICD 275 (352)
T ss_pred --e--CCCCeE----EeeEE--------------------HHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHH
Confidence 1 445545 88988 9999999988887665678999999999999999999999
Q ss_pred hcCCccc--------ccccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 553 VTGKPVP--------YIVEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 553 ~~g~~~~--------~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
.+|...+ +...+.++.+.....+|++|++++|||+|+++++.
T Consensus 276 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~l~~ 325 (352)
T PRK10084 276 LLDEIVPKATSYREQITYVADRPGHDRRYAIDASKISRELGWKPQETFES 325 (352)
T ss_pred HhccccccccchhhhccccccCCCCCceeeeCHHHHHHHcCCCCcCCHHH
Confidence 9985321 11223344455667899999999999999998864
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=228.68 Aligned_cols=237 Identities=15% Similarity=0.089 Sum_probs=174.8
Q ss_pred EEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCCC
Q psy16545 257 YSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL 336 (600)
Q Consensus 257 i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~ 336 (600)
+.+|+.|.+.+.++++..++|+|||||+......+..++...+.+|+.++.+|+++|++.++ +|||+||..|||.....
T Consensus 36 ~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~ 114 (299)
T PRK09987 36 YCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDI 114 (299)
T ss_pred ccCCCCCHHHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCC
Confidence 35799999999999987779999999999887777788888999999999999999999986 89999999999987777
Q ss_pred CCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEEeeC
Q psy16545 337 PITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL 415 (600)
Q Consensus 337 ~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 415 (600)
|++|+++..|. ++||.|| ..+|.+++.+. .+.+++|+++ |||++...
T Consensus 115 p~~E~~~~~P~-~~Yg~sK---~~~E~~~~~~~----~~~~ilR~~~vyGp~~~~~------------------------ 162 (299)
T PRK09987 115 PWQETDATAPL-NVYGETK---LAGEKALQEHC----AKHLIFRTSWVYAGKGNNF------------------------ 162 (299)
T ss_pred CcCCCCCCCCC-CHHHHHH---HHHHHHHHHhC----CCEEEEecceecCCCCCCH------------------------
Confidence 89999998886 8999999 77899988663 3679999877 44432211
Q ss_pred CCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhhhcC
Q psy16545 416 GTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTG 495 (600)
Q Consensus 416 g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d 495 (600)
+..+++.+. .++++++. ++.-|.+. +++.+
T Consensus 163 -------------------------------------~~~~~~~~~--~~~~~~v~----~d~~g~~~----~~~~~--- 192 (299)
T PRK09987 163 -------------------------------------AKTMLRLAK--EREELSVI----NDQFGAPT----GAELL--- 192 (299)
T ss_pred -------------------------------------HHHHHHHHh--cCCCeEEe----CCCcCCCC----CHHHH---
Confidence 111111111 14444442 22112322 44444
Q ss_pred CCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhc---CCccc---cccc-----C
Q psy16545 496 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVT---GKPVP---YIVE-----A 564 (600)
Q Consensus 496 ~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~---g~~~~---~~~~-----~ 564 (600)
++|+++++..++......++||+++++.+|+.|+++.+.+.+ |.+.+ +... +
T Consensus 193 -----------------~d~~~~~~~~~~~~~~~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~ 255 (299)
T PRK09987 193 -----------------ADCTAHAIRVALNKPEVAGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYP 255 (299)
T ss_pred -----------------HHHHHHHHHHhhccCCCCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcC
Confidence 667777777666543345799999999999999999998864 43321 2222 2
Q ss_pred CCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 565 RREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 565 ~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
.+..++.+..+|++|+++.|||+|. +++.
T Consensus 256 ~~~~rp~~~~ld~~k~~~~lg~~~~-~~~~ 284 (299)
T PRK09987 256 TPARRPHNSRLNTEKFQQNFALVLP-DWQV 284 (299)
T ss_pred CCCCCCCcccCCHHHHHHHhCCCCc-cHHH
Confidence 3455677889999999999999985 7654
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-25 Score=229.17 Aligned_cols=264 Identities=34% Similarity=0.567 Sum_probs=194.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
+..+.++.+|+.+...+.++++..++|+|||+|+.........++...++.|+.++.+++++|++.++++||++||.++|
T Consensus 49 ~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~y 128 (338)
T PRK10675 49 GKHPTFVEGDIRNEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVY 128 (338)
T ss_pred CCCceEEEccCCCHHHHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhh
Confidence 44578889999999999998876679999999987654444566788999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh-CCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCc
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT-GNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPV 408 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~-~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~ 408 (600)
|.....+++|+.+...+.+.|+.+| ..+|.+++.+++.+ +++++++|+++ +|+....
T Consensus 129 g~~~~~~~~E~~~~~~p~~~Y~~sK---~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~------------------ 187 (338)
T PRK10675 129 GDQPKIPYVESFPTGTPQSPYGKSK---LMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSG------------------ 187 (338)
T ss_pred CCCCCCccccccCCCCCCChhHHHH---HHHHHHHHHHHHhcCCCcEEEEEeeeecCCCccc------------------
Confidence 9776678899988733348999999 78999999997654 78999999876 4432111
Q ss_pred ceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHH-hCCCCceeecc--CCCCCcccchh
Q psy16545 409 PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERV-TGKPVPYIFYN--LGTGQGTSVLQ 485 (600)
Q Consensus 409 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~g~~~~~~~ 485 (600)
.||++.... ...++..+.++ .+...++.+++ +...+|.++
T Consensus 188 -----~~g~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-- 230 (338)
T PRK10675 188 -----DMGEDPQGI------------------------------PNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV-- 230 (338)
T ss_pred -----ccccCCCCC------------------------------hhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEE--
Confidence 123321000 00111111111 12221121111 111244555
Q ss_pred hhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCC---CCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccc
Q psy16545 486 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK---PVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIV 562 (600)
Q Consensus 486 ~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~---~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~ 562 (600)
|+|+| ++|+++++..++.. ...+++||+++++.+|++|+++++.+.+|.+.++..
T Consensus 231 --~~~v~--------------------v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~ 288 (338)
T PRK10675 231 --RDYIH--------------------VMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHF 288 (338)
T ss_pred --EeeEE--------------------HHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeee
Confidence 89999 88888888877754 123589999999999999999999999998777766
Q ss_pred cCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 563 EARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 563 ~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
.+.+..+....++|++|++++|||+|+++++.
T Consensus 289 ~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~ 320 (338)
T PRK10675 289 APRREGDLPAYWADASKADRELNWRVTRTLDE 320 (338)
T ss_pred CCCCCCchhhhhcCHHHHHHHhCCCCcCcHHH
Confidence 66666666677889999999999999998764
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=233.26 Aligned_cols=248 Identities=21% Similarity=0.294 Sum_probs=186.2
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecCcccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~r~v~~SS~~vY 330 (600)
..++++.+|+.+.+.+.++++..++|+|||+|+......+..++...+++|+.++.+++++|++.+ +++||++||.++|
T Consensus 52 ~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vy 131 (349)
T TIGR02622 52 KKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCY 131 (349)
T ss_pred CCceEEEccCCCHHHHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhh
Confidence 357788999999999999998777899999999766666677889999999999999999999876 7899999999999
Q ss_pred cCCCC-CCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh-------CCCCeeEeecc-cCCCCcchHHHHHHHHHH
Q psy16545 331 GEPQF-LPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT-------GNKPVPYIFYN-LGTGQGTSVLQLLRTFER 401 (600)
Q Consensus 331 g~~~~-~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~-------~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~ 401 (600)
|.... .+++|+.+..|. ++|+.+| ...|.+++.+.+.+ +++++++||++ +||++...
T Consensus 132 g~~~~~~~~~e~~~~~p~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~---------- 197 (349)
T TIGR02622 132 RNDEWVWGYRETDPLGGH-DPYSSSK---ACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAE---------- 197 (349)
T ss_pred CCCCCCCCCccCCCCCCC-CcchhHH---HHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchh----------
Confidence 87542 467888887665 8999999 77899999887764 89999999887 54432110
Q ss_pred HhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcc
Q psy16545 402 VTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGT 481 (600)
Q Consensus 402 ~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 481 (600)
+.. +..+++.+. .++++++ +++.
T Consensus 198 ---------------------------------~~~---------------~~~~~~~~~--~g~~~~~-------~~g~ 220 (349)
T TIGR02622 198 ---------------------------------DRL---------------IPDVIRAFS--SNKIVII-------RNPD 220 (349)
T ss_pred ---------------------------------hhh---------------hHHHHHHHh--cCCCeEE-------CCCC
Confidence 000 111222222 2555544 3344
Q ss_pred cchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCC----C-CceeEeEcCCC--CCccHHHHHHHHhhhc
Q psy16545 482 SVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK----P-VPYIFYNLGTG--QGTSVLQLLRTFERVT 554 (600)
Q Consensus 482 ~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~----~-~~~~~~nl~~~--~~~s~~e~~~~~~~~~ 554 (600)
+. |+|+| ++|+++++..++++ . ..+++||++++ +++|+.|+++.+.+..
T Consensus 221 ~~----rd~i~--------------------v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~ 276 (349)
T TIGR02622 221 AT----RPWQH--------------------VLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFW 276 (349)
T ss_pred cc----cceee--------------------HHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHh
Confidence 44 99999 77777777665432 1 23679999985 7999999999998876
Q ss_pred C-Ccccccc--cCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 555 G-KPVPYIV--EARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 555 g-~~~~~~~--~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+ .++.+.. .+.++.+.....+|++|++++|||+|+++|+.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~ 319 (349)
T TIGR02622 277 WGDDAEWEDDSDLNHPHEARLLKLDSSKARTLLGWHPRWGLEE 319 (349)
T ss_pred cCCCCceeeccCCCCCcccceeecCHHHHHHHhCCCCCCCHHH
Confidence 5 3334433 23445566677899999999999999999864
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-25 Score=248.34 Aligned_cols=247 Identities=23% Similarity=0.321 Sum_probs=191.3
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecCcccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~r~v~~SS~~vY 330 (600)
.+++++.+|+.+.+.+..++...++|+|||+|+......+..++..+++.|+.+|.+++++|++.+ ++||||+||.+||
T Consensus 57 ~~v~~~~~Dl~d~~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vy 136 (668)
T PLN02260 57 PNFKFVKGDIASADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVY 136 (668)
T ss_pred CCeEEEECCCCChHHHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHh
Confidence 468899999999988887775558999999999877666667788899999999999999999987 8999999999999
Q ss_pred cCCCCCC---CCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCC
Q psy16545 331 GEPQFLP---ITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNK 406 (600)
Q Consensus 331 g~~~~~~---~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~ 406 (600)
|.....+ .+|+.+..|. ++|+.+| ..+|.+++.+.+.++++++++|+++ ||+++.... +
T Consensus 137 g~~~~~~~~~~~E~~~~~p~-~~Y~~sK---~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~--~----------- 199 (668)
T PLN02260 137 GETDEDADVGNHEASQLLPT-NPYSATK---AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEK--L----------- 199 (668)
T ss_pred CCCccccccCccccCCCCCC-CCcHHHH---HHHHHHHHHHHHHcCCCEEEECcccccCcCCCccc--H-----------
Confidence 9765432 3677777665 8899999 8899999999988999999999887 444321100 0
Q ss_pred CcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhh
Q psy16545 407 PVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQL 486 (600)
Q Consensus 407 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 486 (600)
+..++..+ ..+.++++. |+|.+.
T Consensus 200 ----------------------------------------------i~~~~~~a--~~g~~i~i~------g~g~~~--- 222 (668)
T PLN02260 200 ----------------------------------------------IPKFILLA--MQGKPLPIH------GDGSNV--- 222 (668)
T ss_pred ----------------------------------------------HHHHHHHH--hCCCCeEEe------cCCCce---
Confidence 11111111 235555541 444444
Q ss_pred hhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccc--ccccC
Q psy16545 487 LRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP--YIVEA 564 (600)
Q Consensus 487 ~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~--~~~~~ 564 (600)
|+|+| |+|+++++..+++....+++||+++++.+|++|+++.+++.+|.+.. +...+
T Consensus 223 -r~~ih--------------------V~Dva~a~~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~ 281 (668)
T PLN02260 223 -RSYLY--------------------CEDVAEAFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVE 281 (668)
T ss_pred -EeeEE--------------------HHHHHHHHHHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecC
Confidence 89999 88999999988876656789999999999999999999999997543 33334
Q ss_pred CCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 565 RREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 565 ~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
.++.+...+.+|++|+++ |||+|+++++.
T Consensus 282 ~~p~~~~~~~~d~~k~~~-lGw~p~~~~~e 310 (668)
T PLN02260 282 NRPFNDQRYFLDDQKLKK-LGWQERTSWEE 310 (668)
T ss_pred CCCCCcceeecCHHHHHH-cCCCCCCCHHH
Confidence 445555667789999975 99999998865
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.1e-25 Score=245.32 Aligned_cols=255 Identities=16% Similarity=0.243 Sum_probs=185.0
Q ss_pred CceeEEEeecCChhh-HHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 252 KKVDFYSCDLVDKNR-LGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~-l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
.+++++.+|+++... +.++++ ++|+|||+|+.........++...++.|+.++.+++++|++++ +||||+||.++|
T Consensus 360 ~~~~~~~gDl~d~~~~l~~~l~--~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vy 436 (660)
T PRK08125 360 PRFHFVEGDISIHSEWIEYHIK--KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVY 436 (660)
T ss_pred CceEEEeccccCcHHHHHHHhc--CCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhc
Confidence 358899999998655 566676 7999999999876655667888899999999999999999998 899999999999
Q ss_pred cCCCCCCCCCCCCC---CC---CCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHh
Q psy16545 331 GEPQFLPITEDHPT---GN---IKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVT 403 (600)
Q Consensus 331 g~~~~~~~~E~~~~---~~---~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~ 403 (600)
|.....+++|+.+. .| +.+.|+.|| ..+|.+++.+.+.++++++++|+++ +||++.....
T Consensus 437 g~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK---~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~---------- 503 (660)
T PRK08125 437 GMCTDKYFDEDTSNLIVGPINKQRWIYSVSK---QLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNA---------- 503 (660)
T ss_pred CCCCCCCcCccccccccCCCCCCccchHHHH---HHHHHHHHHHHHhcCCceEEEEEceeeCCCcccccc----------
Confidence 97665678888753 22 236899999 8899999999988999999999887 5543211000
Q ss_pred CCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccc
Q psy16545 404 GNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSV 483 (600)
Q Consensus 404 g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 483 (600)
..+++ ...+..++..+ ..++++.+. |+|.+.
T Consensus 504 ---------~~~~~--------------------------------~~~i~~~i~~~--~~~~~i~~~------g~g~~~ 534 (660)
T PRK08125 504 ---------ARIGS--------------------------------SRAITQLILNL--VEGSPIKLV------DGGKQK 534 (660)
T ss_pred ---------ccccc--------------------------------cchHHHHHHHh--cCCCCeEEe------CCCcee
Confidence 00000 00011222222 125555441 455555
Q ss_pred hhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCC---ceeEeEcCCCC-CccHHHHHHHHhhhcCCcc-
Q psy16545 484 LQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV---PYIFYNLGTGQ-GTSVLQLLRTFERVTGKPV- 558 (600)
Q Consensus 484 ~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~---~~~~~nl~~~~-~~s~~e~~~~~~~~~g~~~- 558 (600)
|+|+| ++|+++++..++++.. .+++||+++++ .+|++|+++.+.+.+|.+.
T Consensus 535 ----rd~i~--------------------v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~ 590 (660)
T PRK08125 535 ----RCFTD--------------------IRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPL 590 (660)
T ss_pred ----eceee--------------------HHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcc
Confidence 99999 8899999888887542 37899999986 7999999999999998532
Q ss_pred cccccCC--------------CCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 559 PYIVEAR--------------REGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 559 ~~~~~~~--------------~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
.+...+. ...+.....+|++|++++|||+|+++++.+
T Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LGw~P~~~lee~ 641 (660)
T PRK08125 591 RDHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRLLDWEPKIDMQET 641 (660)
T ss_pred cccCCccccccccccccccccccccccccCCChHHHHHHhCCCCCCcHHHH
Confidence 1111110 012344567899999999999999998753
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-24 Score=221.92 Aligned_cols=248 Identities=25% Similarity=0.351 Sum_probs=189.7
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEecCcccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY-QLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~-r~v~~SS~~vY 330 (600)
.+++++.+|+.+++++.++++..++|+|||+|+......+..++..+++.|+.++.+++++|++.+.+ ++|++||.++|
T Consensus 50 ~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~ 129 (317)
T TIGR01181 50 PRYRFVKGDIGDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVY 129 (317)
T ss_pred CCcEEEEcCCcCHHHHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeecccee
Confidence 36788999999999999999865699999999986655566678889999999999999999987544 89999999999
Q ss_pred cCCCCC-CCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCc
Q psy16545 331 GEPQFL-PITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPV 408 (600)
Q Consensus 331 g~~~~~-~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~ 408 (600)
|..... +++|+.+..|. +.|+.+| ..+|.+++.+....+++++++|++. +|++.....
T Consensus 130 g~~~~~~~~~e~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~---------------- 189 (317)
T TIGR01181 130 GDLEKGDAFTETTPLAPS-SPYSASK---AASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEK---------------- 189 (317)
T ss_pred CCCCCCCCcCCCCCCCCC-CchHHHH---HHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccc----------------
Confidence 975433 68888887765 7899999 7799999999988999999999876 444321100
Q ss_pred ceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhh
Q psy16545 409 PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLR 488 (600)
Q Consensus 409 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 488 (600)
.+..++..+ ..+.++++. +++.+. +
T Consensus 190 -------------------------------------------~~~~~~~~~--~~~~~~~~~------~~g~~~----~ 214 (317)
T TIGR01181 190 -------------------------------------------LIPLMITNA--LAGKPLPVY------GDGQQV----R 214 (317)
T ss_pred -------------------------------------------HHHHHHHHH--hcCCCceEe------CCCceE----E
Confidence 011111111 124444441 344444 8
Q ss_pred hhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccc-cccCCCC
Q psy16545 489 TFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPY-IVEARRE 567 (600)
Q Consensus 489 ~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~-~~~~~~~ 567 (600)
+|+| ++|+++++..++.+...+++||+++++.+|++|+++++.+.+|.+... ...+.++
T Consensus 215 ~~i~--------------------v~D~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~ 274 (317)
T TIGR01181 215 DWLY--------------------VEDHCRAIYLVLEKGRVGETYNIGGGNERTNLEVVETILELLGKDEDLITHVEDRP 274 (317)
T ss_pred eeEE--------------------HHHHHHHHHHHHcCCCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccCCCc
Confidence 8888 899999999888776667899999999999999999999999964332 2233333
Q ss_pred CCccccccChHHHHHHcCceeeEEEEe
Q psy16545 568 GDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 568 ~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
.....+.+|++|+++.|||+|+++++.
T Consensus 275 ~~~~~~~~~~~k~~~~lG~~p~~~~~~ 301 (317)
T TIGR01181 275 GHDRRYAIDASKIKRELGWAPKYTFEE 301 (317)
T ss_pred cchhhhcCCHHHHHHHhCCCCCCcHHH
Confidence 444455689999999999999998764
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=227.89 Aligned_cols=247 Identities=19% Similarity=0.220 Sum_probs=181.6
Q ss_pred eeEEEeecCChhhHHHHhhcCCccEEEEcccccCcc-ccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccC
Q psy16545 254 VDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVG-ESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 332 (600)
Q Consensus 254 v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~-~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~ 332 (600)
.+++.+|+.+...+..++. ++|+|||+|+..... ....++...+..|+.++.+|+++|++.++++|||+||.++||.
T Consensus 66 ~~~~~~Dl~d~~~~~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~ 143 (370)
T PLN02695 66 HEFHLVDLRVMENCLKVTK--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPE 143 (370)
T ss_pred ceEEECCCCCHHHHHHHHh--CCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCC
Confidence 4678899999988888877 789999999875321 1223556678899999999999999999999999999999996
Q ss_pred CCC----CCCCCCC--CCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCC
Q psy16545 333 PQF----LPITEDH--PTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGN 405 (600)
Q Consensus 333 ~~~----~~~~E~~--~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~ 405 (600)
... .++.|++ |..|. +.|+.+| ..+|.+++.+...++++++++|+++ +||++.-..
T Consensus 144 ~~~~~~~~~~~E~~~~p~~p~-s~Yg~sK---~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~------------- 206 (370)
T PLN02695 144 FKQLETNVSLKESDAWPAEPQ-DAYGLEK---LATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKG------------- 206 (370)
T ss_pred ccccCcCCCcCcccCCCCCCC-CHHHHHH---HHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccc-------------
Confidence 532 2466665 55554 8999999 8899999999998999999999887 444321000
Q ss_pred CCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchh
Q psy16545 406 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQ 485 (600)
Q Consensus 406 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 485 (600)
+.......++..+.. .+.++++ + ++|.+.
T Consensus 207 ------------------------------------------~~~~~~~~~~~~~~~-~~~~i~~----~--g~g~~~-- 235 (370)
T PLN02695 207 ------------------------------------------GREKAPAAFCRKALT-STDEFEM----W--GDGKQT-- 235 (370)
T ss_pred ------------------------------------------cccccHHHHHHHHHc-CCCCeEE----e--CCCCeE--
Confidence 000001112221111 1344444 2 344444
Q ss_pred hhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCC
Q psy16545 486 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEAR 565 (600)
Q Consensus 486 ~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 565 (600)
|+|+| ++|+++++..+++.. ..++||+++++.+|++|+++.+.+..|.+.++...+.
T Consensus 236 --r~~i~--------------------v~D~a~ai~~~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~ 292 (370)
T PLN02695 236 --RSFTF--------------------IDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPG 292 (370)
T ss_pred --EeEEe--------------------HHHHHHHHHHHHhcc-CCCceEecCCCceeHHHHHHHHHHHhCCCCCceecCC
Confidence 89999 889999998877664 3679999999999999999999999997666665554
Q ss_pred CCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 566 REGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 566 ~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+.+ .....+|++|++++|||+|+++++.
T Consensus 293 ~~~-~~~~~~d~sk~~~~lgw~p~~~l~e 320 (370)
T PLN02695 293 PEG-VRGRNSDNTLIKEKLGWAPTMRLKD 320 (370)
T ss_pred CCC-ccccccCHHHHHHhcCCCCCCCHHH
Confidence 322 2345689999999999999998764
|
|
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.3e-25 Score=210.71 Aligned_cols=207 Identities=49% Similarity=0.774 Sum_probs=183.0
Q ss_pred CcccccccCCCCcchHHHHHHHhhhccC--CCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccC
Q psy16545 1 MINKFYNLGTGQGTSVLQLLRTFERVTG--KPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKA 78 (600)
Q Consensus 1 ~~d~~~~~vtG~~g~~~~~l~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~ 78 (600)
++|||.++ ...++.++..+.. ..+.++ .+|++|.+.+++ +++...+|.|+|+|+...
T Consensus 31 ~vDNl~n~-------~~~sl~r~~~l~~~~~~v~f~-----~~Dl~D~~~L~k---------vF~~~~fd~V~Hfa~~~~ 89 (343)
T KOG1371|consen 31 IVDNLNNS-------YLESLKRVRQLLGEGKSVFFV-----EGDLNDAEALEK---------LFSEVKFDAVMHFAALAA 89 (343)
T ss_pred EEeccccc-------chhHHHHHHHhcCCCCceEEE-----EeccCCHHHHHH---------HHhhcCCceEEeehhhhc
Confidence 35666665 4445556655555 678999 999999999999 777778999999999999
Q ss_pred cccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q psy16545 79 VGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSK 158 (600)
Q Consensus 79 ~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~ 158 (600)
.+.+.+++..+..+|+.||.+|++.|++++++.+|+.||+.+||.+...|++|+++...|.++||.+|.+.|..+..+.+
T Consensus 90 vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~ 169 (343)
T KOG1371|consen 90 VGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNK 169 (343)
T ss_pred cchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhc
Confidence 88899999999999999999999999999999999999999999999999999999933999999999999999999998
Q ss_pred hcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeec
Q psy16545 159 AHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDN 229 (600)
Q Consensus 159 ~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~ 229 (600)
.. ++.++.||.++++|.++.+.+|++..+.+++++|.+.+.+.++.+.+.++|+.....|+..++|+++.
T Consensus 170 ~~-~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v 239 (343)
T KOG1371|consen 170 AY-GWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHV 239 (343)
T ss_pred cc-cceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecceee
Confidence 87 69999999999999999999999999999999999999999999999888887777777777766653
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=211.25 Aligned_cols=187 Identities=24% Similarity=0.178 Sum_probs=165.0
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCChhh
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLM 88 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~ 88 (600)
|||++|++|+.|.++.. .+.+++.+++..+|++|++.+.+ ++.+.+||+|||+|+++..+.++.+++.
T Consensus 5 i~G~~GqLG~~L~~~l~---~~~~v~a~~~~~~Ditd~~~v~~---------~i~~~~PDvVIn~AAyt~vD~aE~~~e~ 72 (281)
T COG1091 5 ITGANGQLGTELRRALP---GEFEVIATDRAELDITDPDAVLE---------VIRETRPDVVINAAAYTAVDKAESEPEL 72 (281)
T ss_pred EEcCCChHHHHHHHHhC---CCceEEeccCccccccChHHHHH---------HHHhhCCCEEEECccccccccccCCHHH
Confidence 79999999999977553 56788989999999999999999 7777789999999999999999999999
Q ss_pred hHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEE
Q psy16545 89 YYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISL 168 (600)
Q Consensus 89 ~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~il 168 (600)
.+.+|..|+.+++++|++.|. ++|++||.+||.+..+.|+.|++++ .|.+.||+||++.|..++.+.. +.+|+
T Consensus 73 A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~-~P~nvYG~sKl~GE~~v~~~~~-----~~~I~ 145 (281)
T COG1091 73 AFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTP-NPLNVYGRSKLAGEEAVRAAGP-----RHLIL 145 (281)
T ss_pred HHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCC-CChhhhhHHHHHHHHHHHHhCC-----CEEEE
Confidence 999999999999999999998 8999999999998888899999999 9999999999999999988754 45999
Q ss_pred ecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeec
Q psy16545 169 RYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDN 229 (600)
Q Consensus 169 R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~ 229 (600)
|.+++||... ++|..++.+.+. .++++.++.| |....++..|+++.
T Consensus 146 Rtswv~g~~g------------~nFv~tml~la~-~~~~l~vv~D--q~gsPt~~~dlA~~ 191 (281)
T COG1091 146 RTSWVYGEYG------------NNFVKTMLRLAK-EGKELKVVDD--QYGSPTYTEDLADA 191 (281)
T ss_pred EeeeeecCCC------------CCHHHHHHHHhh-cCCceEEECC--eeeCCccHHHHHHH
Confidence 9999999962 468888888887 6788888776 56667777766653
|
|
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.1e-25 Score=207.86 Aligned_cols=179 Identities=23% Similarity=0.320 Sum_probs=158.7
Q ss_pred CCCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc
Q psy16545 28 GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH 107 (600)
Q Consensus 28 ~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~ 107 (600)
.++.+++ ++|+.+...+.. ++....+|.|||.|+......++.++..+...|+.+|..|+++++..
T Consensus 56 ~p~ykfv-----~~di~~~~~~~~---------~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~s 121 (331)
T KOG0747|consen 56 SPNYKFV-----EGDIADADLVLY---------LFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVS 121 (331)
T ss_pred CCCceEe-----eccccchHHHHh---------hhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhc
Confidence 3567788 899999888888 66666899999999999988899999999999999999999999998
Q ss_pred -CCCeEEEecCccccCCCCCCCCC-CCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCC
Q psy16545 108 -GVYQLVFSSSCTVYGEPQFLPIT-EDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGED 185 (600)
Q Consensus 108 -~~~r~I~~SS~~vyg~~~~~~~~-E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~ 185 (600)
++++||++||..|||........ |.+.+ .|.++|++||+++|..++++...+ +++++++|.++||||++.
T Consensus 122 g~i~~fvhvSTdeVYGds~~~~~~~E~s~~-nPtnpyAasKaAaE~~v~Sy~~sy-~lpvv~~R~nnVYGP~q~------ 193 (331)
T KOG0747|consen 122 GNIRRFVHVSTDEVYGDSDEDAVVGEASLL-NPTNPYAASKAAAEMLVRSYGRSY-GLPVVTTRMNNVYGPNQY------ 193 (331)
T ss_pred cCeeEEEEecccceecCccccccccccccC-CCCCchHHHHHHHHHHHHHHhhcc-CCcEEEEeccCccCCCcC------
Confidence 68999999999999988766655 99999 899999999999999999999998 999999999999999754
Q ss_pred CCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 186 PTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
...++|.|+..++ ++++.++.|+|.+.|+++|+.|++.++-.+
T Consensus 194 ----~~klipkFi~l~~-~~~~~~i~g~g~~~rs~l~veD~~ea~~~v 236 (331)
T KOG0747|consen 194 ----PEKLIPKFIKLAM-RGKEYPIHGDGLQTRSYLYVEDVSEAFKAV 236 (331)
T ss_pred ----hHHHhHHHHHHHH-hCCCcceecCcccceeeEeHHHHHHHHHHH
Confidence 3568998888666 567899999999999999999988755433
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=204.34 Aligned_cols=257 Identities=18% Similarity=0.249 Sum_probs=206.9
Q ss_pred HHHhhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCC--CEEE
Q psy16545 245 AIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV--YQLV 322 (600)
Q Consensus 245 ~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~--~r~v 322 (600)
......+.++++..+|++|...+.++++...||.|+|+||+..+..+++.|....+.+..||.+|||+.+..+. .||.
T Consensus 48 ~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfY 127 (345)
T COG1089 48 EDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFY 127 (345)
T ss_pred cccccCCceeEEEeccccchHHHHHHHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEE
Confidence 33444456789999999999999999999999999999999999999999999999999999999999998764 5999
Q ss_pred EecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHH
Q psy16545 323 FSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFER 401 (600)
Q Consensus 323 ~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~ 401 (600)
.+||+..||.....|.+|++|..|. +||+.+| +.+--+..+|.+.+|+-.+.-+.|| -.|..+..|+
T Consensus 128 QAStSE~fG~v~~~pq~E~TPFyPr-SPYAvAK---lYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FV-------- 195 (345)
T COG1089 128 QASTSELYGLVQEIPQKETTPFYPR-SPYAVAK---LYAYWITVNYRESYGLFACNGILFNHESPLRGETFV-------- 195 (345)
T ss_pred ecccHHhhcCcccCccccCCCCCCC-CHHHHHH---HHHHheeeehHhhcCceeecceeecCCCCCCcccee--------
Confidence 9999999999999999999999997 9999999 7788888999999998887766666 5555555432
Q ss_pred HhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHH-HhCCCCceeeccCCCCCc
Q psy16545 402 VTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFER-VTGKPVPYIFYNLGTGQG 480 (600)
Q Consensus 402 ~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~ 480 (600)
-+.+.+.+.+ ..|..-.+.+ |+-
T Consensus 196 ---------------------------------------------------TRKIt~ava~Ik~G~q~~l~l-----GNl 219 (345)
T COG1089 196 ---------------------------------------------------TRKITRAVARIKLGLQDKLYL-----GNL 219 (345)
T ss_pred ---------------------------------------------------hHHHHHHHHHHHccccceEEe-----ccc
Confidence 1122222211 2244333332 333
Q ss_pred ccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccc
Q psy16545 481 TSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPY 560 (600)
Q Consensus 481 ~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~ 560 (600)
... |||-| ..|.|++++.+++++. .+.|++++|+..|++|++++..+..|.++++
T Consensus 220 dAk----RDWG~--------------------A~DYVe~mwlmLQq~~-PddyViATg~t~sVrefv~~Af~~~g~~l~w 274 (345)
T COG1089 220 DAK----RDWGH--------------------AKDYVEAMWLMLQQEE-PDDYVIATGETHSVREFVELAFEMVGIDLEW 274 (345)
T ss_pred ccc----ccccc--------------------hHHHHHHHHHHHccCC-CCceEEecCceeeHHHHHHHHHHHcCceEEE
Confidence 333 88877 8899999999998864 5799999999999999999999999966553
Q ss_pred c-------------------ccC--CCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 561 I-------------------VEA--RREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 561 ~-------------------~~~--~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
. ..| .||.++.-+..|.+|+++.|||+|+++|+.
T Consensus 275 ~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp~KA~~~LGW~~~~~~~e 329 (345)
T COG1089 275 EGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDPTKAKEKLGWRPEVSLEE 329 (345)
T ss_pred eeccccccccccccCceeEEECccccCchhhhhhcCCHHHHHHHcCCccccCHHH
Confidence 2 222 357777788999999999999999999863
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.4e-24 Score=218.79 Aligned_cols=237 Identities=18% Similarity=0.182 Sum_probs=175.3
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCc-ccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSC-TVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~-~vY 330 (600)
..++++.+|+.+...+.++++ ++|+|||+|+.. ..++...++.|+.++.+++++|++.+++||||+||. ++|
T Consensus 60 ~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~A~~~-----~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avy 132 (342)
T PLN02214 60 ERLILCKADLQDYEALKAAID--GCDGVFHTASPV-----TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVY 132 (342)
T ss_pred CcEEEEecCcCChHHHHHHHh--cCCEEEEecCCC-----CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeee
Confidence 357889999999999999998 799999999864 246788899999999999999999999999999996 699
Q ss_pred cCCCC---CCCCCCCC------CCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHH
Q psy16545 331 GEPQF---LPITEDHP------TGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFE 400 (600)
Q Consensus 331 g~~~~---~~~~E~~~------~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~ 400 (600)
|.... .+++|+++ ..| .++|+.|| ..+|.+++.+.+.++++++++||++ +||+......
T Consensus 133 g~~~~~~~~~~~E~~~~~~~~~~~p-~~~Y~~sK---~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~------- 201 (342)
T PLN02214 133 MDPNRDPEAVVDESCWSDLDFCKNT-KNWYCYGK---MVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTIN------- 201 (342)
T ss_pred ccCCCCCCcccCcccCCChhhcccc-ccHHHHHH---HHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCC-------
Confidence 85432 34788852 223 37899999 8899999999988999999999987 5543221100
Q ss_pred HHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCc
Q psy16545 401 RVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQG 480 (600)
Q Consensus 401 ~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 480 (600)
..+..++ ....+.... .+++
T Consensus 202 --------------------------------------------------~~~~~~~---~~~~g~~~~-------~~~~ 221 (342)
T PLN02214 202 --------------------------------------------------ASLYHVL---KYLTGSAKT-------YANL 221 (342)
T ss_pred --------------------------------------------------chHHHHH---HHHcCCccc-------CCCC
Confidence 0011111 111232221 1333
Q ss_pred ccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCC-ccc
Q psy16545 481 TSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK-PVP 559 (600)
Q Consensus 481 ~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~-~~~ 559 (600)
. |+|+| |+|+++++..+++++..++.||+++ ..++++|+++.+++.++. +++
T Consensus 222 ~------~~~i~--------------------V~Dva~a~~~al~~~~~~g~yn~~~-~~~~~~el~~~i~~~~~~~~~~ 274 (342)
T PLN02214 222 T------QAYVD--------------------VRDVALAHVLVYEAPSASGRYLLAE-SARHRGEVVEILAKLFPEYPLP 274 (342)
T ss_pred C------cCeeE--------------------HHHHHHHHHHHHhCcccCCcEEEec-CCCCHHHHHHHHHHHCCCCCCC
Confidence 3 88988 9999999999988765567999987 578999999999999963 333
Q ss_pred ccccCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 560 YIVEARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 560 ~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
....+.+........+|++|+++ |||+| +++|.+
T Consensus 275 ~~~~~~~~~~~~~~~~d~~k~~~-LG~~p-~~lee~ 308 (342)
T PLN02214 275 TKCKDEKNPRAKPYKFTNQKIKD-LGLEF-TSTKQS 308 (342)
T ss_pred CCCccccCCCCCccccCcHHHHH-cCCcc-cCHHHH
Confidence 33333334455566789999985 99999 588754
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-24 Score=219.07 Aligned_cols=181 Identities=19% Similarity=0.131 Sum_probs=148.1
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccccc----ccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARRE----GDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQ 84 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~----~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~ 84 (600)
|||++||+|+++.+. +...+ +++++|+.. +|++|.+.+.+ +++..++|+||||||......++.
T Consensus 5 VtG~~GfiGs~l~~~--L~~~g-~V~~~~~~~~~~~~Dl~d~~~~~~---------~~~~~~~D~Vih~Aa~~~~~~~~~ 72 (299)
T PRK09987 5 LFGKTGQVGWELQRA--LAPLG-NLIALDVHSTDYCGDFSNPEGVAE---------TVRKIRPDVIVNAAAHTAVDKAES 72 (299)
T ss_pred EECCCCHHHHHHHHH--hhccC-CEEEeccccccccCCCCCHHHHHH---------HHHhcCCCEEEECCccCCcchhhc
Confidence 799999999999663 33333 456667653 79999998888 666557999999999987766777
Q ss_pred ChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCce
Q psy16545 85 EPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWN 164 (600)
Q Consensus 85 ~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~ 164 (600)
++...+++|+.++.+|+++|++.++ ++|++||..+||.....|++|+++. .|.++||.||+.+|++++.+.. +
T Consensus 73 ~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~-~P~~~Yg~sK~~~E~~~~~~~~-----~ 145 (299)
T PRK09987 73 EPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDAT-APLNVYGETKLAGEKALQEHCA-----K 145 (299)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCC-CCCCHHHHHHHHHHHHHHHhCC-----C
Confidence 8888899999999999999999996 8999999999987766789999999 8999999999999999987643 4
Q ss_pred EEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecC--CcccccCc
Q psy16545 165 IISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGA--DYETEDGT 221 (600)
Q Consensus 165 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~--g~~~~~~~ 221 (600)
.+++|++++|||+. .++++.+.+.+. .+++++++++ |.+.+++.
T Consensus 146 ~~ilR~~~vyGp~~------------~~~~~~~~~~~~-~~~~~~v~~d~~g~~~~~~~ 191 (299)
T PRK09987 146 HLIFRTSWVYAGKG------------NNFAKTMLRLAK-EREELSVINDQFGAPTGAEL 191 (299)
T ss_pred EEEEecceecCCCC------------CCHHHHHHHHHh-cCCCeEEeCCCcCCCCCHHH
Confidence 59999999999952 236677777665 4578899988 55555553
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.8e-24 Score=228.06 Aligned_cols=182 Identities=21% Similarity=0.223 Sum_probs=136.6
Q ss_pred cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCC---hhhhHHhHHHHHHHHHHHHHHcCCC-eEEEe
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQE---PLMYYKNNLIATINLLEVMKSHGVY-QLVFS 115 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~---~~~~~~~Nv~gt~~ll~a~~~~~~~-r~I~~ 115 (600)
.+|++|.+.+.+ +++..++|+|||+|+.........+ ....+++|+.|+.+|+++|++.+++ +||++
T Consensus 119 ~~Dl~d~~~v~~---------~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~ 189 (442)
T PLN02572 119 VGDICDFEFLSE---------AFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKL 189 (442)
T ss_pred ECCCCCHHHHHH---------HHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEE
Confidence 689999988888 6654579999999987544333333 2456789999999999999999885 89999
Q ss_pred cCccccCCCCCCCCCC-----------C---CCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCC
Q psy16545 116 SSCTVYGEPQFLPITE-----------D---HPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGR 181 (600)
Q Consensus 116 SS~~vyg~~~~~~~~E-----------~---~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~ 181 (600)
||..+||... .+++| + .+. .|.++|+.||.++|.+++.+++.+ +++++++||++||||+....
T Consensus 190 SS~~vYG~~~-~~~~E~~i~~~~~~~e~~~~~~~-~P~s~Yg~SK~a~E~l~~~~~~~~-gl~~v~lR~~~vyGp~~~~~ 266 (442)
T PLN02572 190 GTMGEYGTPN-IDIEEGYITITHNGRTDTLPYPK-QASSFYHLSKVHDSHNIAFTCKAW-GIRATDLNQGVVYGVRTDET 266 (442)
T ss_pred ecceecCCCC-CCCcccccccccccccccccCCC-CCCCcchhHHHHHHHHHHHHHHhc-CCCEEEEecccccCCCCccc
Confidence 9999998642 23322 2 255 678999999999999999998887 99999999999999975421
Q ss_pred C-------CCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeecccccc
Q psy16545 182 I-------GEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 182 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a~ 234 (600)
. +.+..+....+++.++..+. .++++.++|+|.+.|+|+||+|+++++..++
T Consensus 267 ~~~~~li~~~~~~~~~~~~i~~~~~~~~-~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al 325 (442)
T PLN02572 267 MMDEELINRLDYDGVFGTALNRFCVQAA-VGHPLTVYGKGGQTRGFLDIRDTVRCIEIAI 325 (442)
T ss_pred ccccccccccCcccchhhHHHHHHHHHh-cCCCceecCCCCEEECeEEHHHHHHHHHHHH
Confidence 0 00001111245655554444 3467888999999999999999999877553
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=229.83 Aligned_cols=202 Identities=21% Similarity=0.257 Sum_probs=153.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccccccc---------------ccChHHhhhHHhhhhcccccccCCCCEEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGD---------------IVSMYANTDLAQKELGWSARCTHDIDCVIH 72 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~D---------------l~~~~~~~~~~~~~~~~~~~~~~~~d~Vih 72 (600)
.|||++||+|++|.+ .+...+.+++++|+.... +.+.+.+.. .+ .++|+|||
T Consensus 124 LVTGatGFIGs~Lv~--~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~---------~~--~~~D~ViH 190 (436)
T PLN02166 124 VVTGGAGFVGSHLVD--KLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP---------IL--LEVDQIYH 190 (436)
T ss_pred EEECCccHHHHHHHH--HHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc---------cc--cCCCEEEE
Confidence 489999999999965 444445566655543110 001111111 22 26999999
Q ss_pred cCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCC-----CCCCCCChHHHHHH
Q psy16545 73 FAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDH-----PTGNIKNVYGKTKH 147 (600)
Q Consensus 73 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~-----~~~~p~s~Y~~sK~ 147 (600)
||+...+.....++...+++|+.||.+|+++|++.++ +||++||.++||.....+++|+. |. .|.++|+.||.
T Consensus 191 lAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~-~p~s~Yg~SK~ 268 (436)
T PLN02166 191 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPI-GERSCYDEGKR 268 (436)
T ss_pred CceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCC-CCCCchHHHHH
Confidence 9998765444467788999999999999999999886 89999999999976666777873 66 67889999999
Q ss_pred HHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEee
Q psy16545 148 FIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAI 227 (600)
Q Consensus 148 ~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v 227 (600)
.+|++++.+++.. +++++++||+++|||+.... ...+++.++..+. .++++.++|+|.+.|+|+|++|++
T Consensus 269 ~aE~~~~~y~~~~-~l~~~ilR~~~vYGp~~~~~--------~~~~i~~~i~~~l-~~~~i~v~g~g~~~rdfi~V~Dva 338 (436)
T PLN02166 269 TAETLAMDYHRGA-GVEVRIARIFNTYGPRMCLD--------DGRVVSNFVAQTI-RKQPMTVYGDGKQTRSFQYVSDLV 338 (436)
T ss_pred HHHHHHHHHHHHh-CCCeEEEEEccccCCCCCCC--------ccchHHHHHHHHh-cCCCcEEeCCCCeEEeeEEHHHHH
Confidence 9999999998776 89999999999999964310 1345665555454 446788899999999999999999
Q ss_pred ecccccc
Q psy16545 228 DNFVNSV 234 (600)
Q Consensus 228 ~~~~~a~ 234 (600)
+++..++
T Consensus 339 ~ai~~~~ 345 (436)
T PLN02166 339 DGLVALM 345 (436)
T ss_pred HHHHHHH
Confidence 9888664
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-23 Score=215.30 Aligned_cols=242 Identities=15% Similarity=0.140 Sum_probs=175.6
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecCcccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~r~v~~SS~~vY 330 (600)
.+++++.+|+.+.+.+.++++ ++|+|||+|+.........++...++.|+.++.+++++|.+. ++++||++||.++|
T Consensus 56 ~~~~~~~~D~~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~ 133 (325)
T PLN02989 56 ERLKLFKADLLDEGSFELAID--GCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAV 133 (325)
T ss_pred CceEEEeCCCCCchHHHHHHc--CCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhhe
Confidence 357899999999999999987 789999999975444444566788999999999999999885 57899999999887
Q ss_pred cCC-----CCCCCCCCCCCCCC-----CcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHH
Q psy16545 331 GEP-----QFLPITEDHPTGNI-----KNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTF 399 (600)
Q Consensus 331 g~~-----~~~~~~E~~~~~~~-----~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~ 399 (600)
+.. ...+++|+.+..|. .++|+.|| ..+|.+++.|.+.++++++++||++ +||+.....
T Consensus 134 ~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK---~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~------- 203 (325)
T PLN02989 134 LAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSK---TLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTL------- 203 (325)
T ss_pred ecCCccCCCCCccCcCCCCchhHhcccccchHHHH---HHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCC-------
Confidence 643 23467898877652 36799999 8899999999988899999999887 444322100
Q ss_pred HHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCC
Q psy16545 400 ERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQ 479 (600)
Q Consensus 400 ~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 479 (600)
.. ...++..+ ..+++. + +.
T Consensus 204 --------------------------------------------------~~-~~~~i~~~--~~~~~~-~-------~~ 222 (325)
T PLN02989 204 --------------------------------------------------NF-SVAVIVEL--MKGKNP-F-------NT 222 (325)
T ss_pred --------------------------------------------------Cc-hHHHHHHH--HcCCCC-C-------CC
Confidence 00 00011111 113221 1 11
Q ss_pred cccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccc
Q psy16545 480 GTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP 559 (600)
Q Consensus 480 ~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~ 559 (600)
+. |+|+| |+|+++++..+++.+..+++||++ +..+|++|+++++++.++.. .
T Consensus 223 ~~------r~~i~--------------------v~Dva~a~~~~l~~~~~~~~~ni~-~~~~s~~ei~~~i~~~~~~~-~ 274 (325)
T PLN02989 223 TH------HRFVD--------------------VRDVALAHVKALETPSANGRYIID-GPVVTIKDIENVLREFFPDL-C 274 (325)
T ss_pred cC------cCeeE--------------------HHHHHHHHHHHhcCcccCceEEEe-cCCCCHHHHHHHHHHHCCCC-C
Confidence 22 78888 999999999988765446799995 56899999999999999742 1
Q ss_pred ccccC--CCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 560 YIVEA--RREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 560 ~~~~~--~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
+...+ .+..+.....+|++|+++ |||+|+++|+.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~l~~g 311 (325)
T PLN02989 275 IADRNEDITELNSVTFNVCLDKVKS-LGIIEFTPTETS 311 (325)
T ss_pred CCCCCCCcccccccCcCCCHHHHHH-cCCCCCCCHHHH
Confidence 11111 111122467889999987 999999998754
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-23 Score=220.12 Aligned_cols=214 Identities=46% Similarity=0.709 Sum_probs=171.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccc-------------------------ccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEAR-------------------------REGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~-------------------------~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
.|||++|++|.++.+.... .+.+++++++ -.+|+++.+.+.+ ++
T Consensus 9 lItGatG~iG~~l~~~L~~--~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~---------~~ 77 (352)
T PLN02240 9 LVTGGAGYIGSHTVLQLLL--AGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEK---------VF 77 (352)
T ss_pred EEECCCChHHHHHHHHHHH--CCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHH---------HH
Confidence 5899999999999653321 2222322221 1678999888887 55
Q ss_pred ccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChH
Q psy16545 63 CTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVY 142 (600)
Q Consensus 63 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y 142 (600)
...++|+|||+||.........++...+++|+.++.+|+++|++.++++||++||.++||.....+++|+.+. .|.++|
T Consensus 78 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~-~~~~~Y 156 (352)
T PLN02240 78 ASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPL-SATNPY 156 (352)
T ss_pred HhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCC-CCCCHH
Confidence 4447999999999765444456778899999999999999999999999999999999987667789999999 899999
Q ss_pred HHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEec------CCcc
Q psy16545 143 GKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG------ADYE 216 (600)
Q Consensus 143 ~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g------~g~~ 216 (600)
+.||.++|++++.+.....+++++++|++++||+++.+.+|+...+....+++++.+...++.+.+.++| +|.+
T Consensus 157 ~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 236 (352)
T PLN02240 157 GRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTG 236 (352)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCE
Confidence 9999999999998875533789999999999999988888776655556678888777766656777776 7899
Q ss_pred cccCcceEEeeeccccc
Q psy16545 217 TEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 217 ~~~~~~v~d~v~~~~~a 233 (600)
.|+|+|++|+++++..+
T Consensus 237 ~~~~i~v~D~a~a~~~a 253 (352)
T PLN02240 237 VRDYIHVMDLADGHIAA 253 (352)
T ss_pred EEeeEEHHHHHHHHHHH
Confidence 99999999999876655
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.1e-24 Score=219.86 Aligned_cols=205 Identities=18% Similarity=0.091 Sum_probs=156.3
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------------------cccccChHHhhhHHhhhhcccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------------EGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
|||++|++|+++.+.. ...+.++++++|. .+|++|.+.+.+ +
T Consensus 5 VTGatGfIG~~l~~~L--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~---------~ 73 (343)
T TIGR01472 5 ITGITGQDGSYLAEFL--LEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRR---------I 73 (343)
T ss_pred EEcCCCcHHHHHHHHH--HHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHH---------H
Confidence 7999999999996533 2223333333221 579999988888 6
Q ss_pred cccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCC---eEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY---QLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 62 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~---r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
++..++|+|||+||.........++...+++|+.||.+|+++|++.+++ +||++||..+||.....+++|+.+. .|
T Consensus 74 ~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~-~p 152 (343)
T TIGR01472 74 IDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPF-YP 152 (343)
T ss_pred HHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCC-CC
Confidence 6645689999999987654445566778899999999999999998763 8999999999997666678999999 89
Q ss_pred CChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccc
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETE 218 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~ 218 (600)
.++|+.||.++|.+++.+++++ ++++++.|+.++|||..... . ....+..+...+....+...++|+|.+.|
T Consensus 153 ~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~~~~~~gp~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~g~g~~~r 224 (343)
T TIGR01472 153 RSPYAAAKLYAHWITVNYREAY-GLFAVNGILFNHESPRRGEN------F-VTRKITRAAAKIKLGLQEKLYLGNLDAKR 224 (343)
T ss_pred CChhHHHHHHHHHHHHHHHHHh-CCceEEEeecccCCCCCCcc------c-cchHHHHHHHHHHcCCCCceeeCCCcccc
Confidence 9999999999999999998876 89999999999999963211 1 12234443333332222344679999999
Q ss_pred cCcceEEeeeccccc
Q psy16545 219 DGTGKVVAIDNFVNS 233 (600)
Q Consensus 219 ~~~~v~d~v~~~~~a 233 (600)
+|+|++|+++++..+
T Consensus 225 d~i~V~D~a~a~~~~ 239 (343)
T TIGR01472 225 DWGHAKDYVEAMWLM 239 (343)
T ss_pred CceeHHHHHHHHHHH
Confidence 999999999877655
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-23 Score=213.46 Aligned_cols=224 Identities=16% Similarity=0.147 Sum_probs=160.1
Q ss_pred CccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccc
Q psy16545 275 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLG 354 (600)
Q Consensus 275 ~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~s 354 (600)
++|+|||+|+..... ..++...++.|+.++.+|+++|++.++ +|||+||.+|||.....+.+|+.+..|. ++|+.+
T Consensus 68 ~~d~Vih~A~~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~-~~Y~~s 143 (308)
T PRK11150 68 DIEAIFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPL-NVYGYS 143 (308)
T ss_pred CccEEEECceecCCc--CCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCC-CHHHHH
Confidence 689999999865432 235667899999999999999999987 7999999999997655567888877775 889999
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHH
Q psy16545 355 TGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERV 433 (600)
Q Consensus 355 K~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 433 (600)
| ..+|++++.+...++++++++|+++ +|+++....
T Consensus 144 K---~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~----------------------------------------- 179 (308)
T PRK11150 144 K---FLFDEYVRQILPEANSQICGFRYFNVYGPREGHKG----------------------------------------- 179 (308)
T ss_pred H---HHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCC-----------------------------------------
Confidence 9 7789999999888899999999876 544321100
Q ss_pred hCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhH
Q psy16545 434 TGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSV 513 (600)
Q Consensus 434 ~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v 513 (600)
.++. ....+...+. .+.+..+. .|+++.. |+|+| |
T Consensus 180 ---~~~~-----------~~~~~~~~~~--~~~~~~i~-----~g~~~~~----r~~i~--------------------v 214 (308)
T PRK11150 180 ---SMAS-----------VAFHLNNQLN--NGENPKLF-----EGSENFK----RDFVY--------------------V 214 (308)
T ss_pred ---ccch-----------hHHHHHHHHh--cCCCCEEe-----cCCCcee----eeeee--------------------H
Confidence 0000 0011111121 23333331 2444434 89999 8
Q ss_pred HHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCCC----CCccccccChHHHHHHcCceee
Q psy16545 514 LQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE----GDIVSMYANTDLAQRELGWSAR 589 (600)
Q Consensus 514 ~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~d~~k~~~~lG~~p~ 589 (600)
+|+++++..++++. .+++||+++++++|+.|+++.+.+.+|.. ++...+.+. .......+|++|+++ +||+|+
T Consensus 215 ~D~a~a~~~~~~~~-~~~~yni~~~~~~s~~el~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~-~g~~p~ 291 (308)
T PRK11150 215 GDVAAVNLWFWENG-VSGIFNCGTGRAESFQAVADAVLAYHKKG-EIEYIPFPDKLKGRYQAFTQADLTKLRA-AGYDKP 291 (308)
T ss_pred HHHHHHHHHHHhcC-CCCeEEcCCCCceeHHHHHHHHHHHhCCC-cceeccCccccccccceecccCHHHHHh-cCCCCC
Confidence 88899888887764 35799999999999999999999999842 222222221 112345789999997 799987
Q ss_pred -EEEEe
Q psy16545 590 -CTVKI 594 (600)
Q Consensus 590 -~~l~~ 594 (600)
.+++.
T Consensus 292 ~~~~~~ 297 (308)
T PRK11150 292 FKTVAE 297 (308)
T ss_pred CCCHHH
Confidence 47764
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=214.73 Aligned_cols=210 Identities=19% Similarity=0.148 Sum_probs=157.7
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCc-ccCCCChh
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAV-GESMQEPL 87 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~-~~~~~~~~ 87 (600)
|||++|++|.++.+.....+..+ +++..+..+|+.+.+++.+ ++...++|+|||||+.... .....++.
T Consensus 2 ItGa~GfiG~~l~~~L~~~g~~v-~~~~~~~~~Dl~~~~~l~~---------~~~~~~~d~Vih~A~~~~~~~~~~~~~~ 71 (306)
T PLN02725 2 VAGHRGLVGSAIVRKLEALGFTN-LVLRTHKELDLTRQADVEA---------FFAKEKPTYVILAAAKVGGIHANMTYPA 71 (306)
T ss_pred cccCCCcccHHHHHHHHhCCCcE-EEeeccccCCCCCHHHHHH---------HHhccCCCEEEEeeeeecccchhhhCcH
Confidence 79999999999976543333222 3345667899999999988 6665679999999998642 22345677
Q ss_pred hhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCC----CCCCCCC-hHHHHHHHHHHHHHHHHhhcCC
Q psy16545 88 MYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDH----PTGNIKN-VYGKTKHFIEEMLKDLSKAHKE 162 (600)
Q Consensus 88 ~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~----~~~~p~s-~Y~~sK~~~e~~~~~~~~~~~~ 162 (600)
..+++|+.++.+|+++|++.+++++|++||..+||.....+++|++ +. .|.+ +|+.||.++|++++.+.+.+ +
T Consensus 72 ~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~-~p~~~~Y~~sK~~~e~~~~~~~~~~-~ 149 (306)
T PLN02725 72 DFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPP-EPTNEWYAIAKIAGIKMCQAYRIQY-G 149 (306)
T ss_pred HHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCC-CCCcchHHHHHHHHHHHHHHHHHHh-C
Confidence 7899999999999999999999999999999999976667889986 44 4544 59999999999999888776 8
Q ss_pred ceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEE-ecCCcccccCcceEEeeeccccc
Q psy16545 163 WNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTV-FGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 163 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
++++++||+++|||.... ..........++..+..... .+.++.+ +++|.+.|+++|++|+++.+..+
T Consensus 150 ~~~~~~R~~~vyG~~~~~--~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~ 218 (306)
T PLN02725 150 WDAISGMPTNLYGPHDNF--HPENSHVIPALIRRFHEAKA-NGAPEVVVWGSGSPLREFLHVDDLADAVVFL 218 (306)
T ss_pred CCEEEEEecceeCCCCCC--CCCCCcccHHHHHHHHHHhh-cCCCeEEEcCCCCeeeccccHHHHHHHHHHH
Confidence 999999999999997421 11111111223333333333 2344554 79999999999999999877655
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-23 Score=215.32 Aligned_cols=214 Identities=42% Similarity=0.647 Sum_probs=168.4
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccc----------------------ccccccChHHhhhHHhhhhcccccccCC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEAR----------------------REGDIVSMYANTDLAQKELGWSARCTHD 66 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~----------------------~~~Dl~~~~~~~~~~~~~~~~~~~~~~~ 66 (600)
|||++|++|.++.+... ..+.+++++++ -.+|+.|.+.+.+ ++...+
T Consensus 5 VtGatG~iG~~l~~~L~--~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~~~~ 73 (338)
T PRK10675 5 VTGGSGYIGSHTCVQLL--QNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTE---------ILHDHA 73 (338)
T ss_pred EECCCChHHHHHHHHHH--HCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHH---------HHhcCC
Confidence 79999999999965332 22222222211 1578888888877 555447
Q ss_pred CCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHH
Q psy16545 67 IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTK 146 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK 146 (600)
+|+|||+|+..........+...+++|+.++.+|+++|++.++++||++||..+||.....+++|+++...|.++|+.+|
T Consensus 74 ~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK 153 (338)
T PRK10675 74 IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSK 153 (338)
T ss_pred CCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHH
Confidence 99999999986543334556778999999999999999999999999999999998766667899887535789999999
Q ss_pred HHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEec------CCcccccC
Q psy16545 147 HFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG------ADYETEDG 220 (600)
Q Consensus 147 ~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g------~g~~~~~~ 220 (600)
.++|++++.++++..+++++++|++++|||++.+.+|++..+....+++.+.+.+.+..+.+.++| +|.+.|++
T Consensus 154 ~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 233 (338)
T PRK10675 154 LMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY 233 (338)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEee
Confidence 999999999876645789999999999999988888877655556677888877765555677776 68899999
Q ss_pred cceEEeeeccccc
Q psy16545 221 TGKVVAIDNFVNS 233 (600)
Q Consensus 221 ~~v~d~v~~~~~a 233 (600)
+|++|+++.+..+
T Consensus 234 v~v~D~a~~~~~~ 246 (338)
T PRK10675 234 IHVMDLADGHVAA 246 (338)
T ss_pred EEHHHHHHHHHHH
Confidence 9999999876655
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.90 E-value=6e-24 Score=208.63 Aligned_cols=203 Identities=28% Similarity=0.342 Sum_probs=168.3
Q ss_pred CCCCcchHHHHHHHhhhccCC-------------------CccEEecccccccccChHHhhhHHhhhhcccccccCCCCE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGK-------------------PVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDC 69 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~-------------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~ 69 (600)
|||++|++|+.+.+.....+. +++++ .+|+.|.+.+.+ +++...+|+
T Consensus 3 I~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-----~~dl~~~~~~~~---------~~~~~~~d~ 68 (236)
T PF01370_consen 3 ITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFV-----IGDLTDKEQLEK---------LLEKANIDV 68 (236)
T ss_dssp EETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEE-----ESETTSHHHHHH---------HHHHHTESE
T ss_pred EEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEE-----Eeeccccccccc---------cccccCceE
Confidence 799999999999653332211 23445 688899998888 555457899
Q ss_pred EEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q psy16545 70 VIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFI 149 (600)
Q Consensus 70 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~ 149 (600)
|||+|+.........+....++.|+.++.+++++|++.+++++|++||..+|+.....+++|+++. .|.++|+.+|..+
T Consensus 69 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~-~~~~~Y~~~K~~~ 147 (236)
T PF01370_consen 69 VIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPI-NPLSPYGASKRAA 147 (236)
T ss_dssp EEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGC-CHSSHHHHHHHHH
T ss_pred EEEeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccc
Confidence 999999864323346778899999999999999999999999999999999998877889999999 8999999999999
Q ss_pred HHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeec
Q psy16545 150 EEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDN 229 (600)
Q Consensus 150 e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~ 229 (600)
|++++.+.++. +++++++||+++|||. . + ......+++.++..+. .++++.++++|.+.|+++|++|+++.
T Consensus 148 e~~~~~~~~~~-~~~~~~~R~~~vyG~~-~--~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~ 218 (236)
T PF01370_consen 148 EELLRDYAKKY-GLRVTILRPPNVYGPG-N--P----NNNSSSFLPSLIRQAL-KGKPIKIPGDGSQVRDFIHVDDLAEA 218 (236)
T ss_dssp HHHHHHHHHHH-TSEEEEEEESEEESTT-S--S----SSSTSSHHHHHHHHHH-TTSSEEEESTSSCEEEEEEHHHHHHH
T ss_pred ccccccccccc-cccccccccccccccc-c--c----ccccccccchhhHHhh-cCCcccccCCCCCccceEEHHHHHHH
Confidence 99999999887 9999999999999997 1 1 1123568887887777 55779999999999999999999998
Q ss_pred cccccc
Q psy16545 230 FVNSVH 235 (600)
Q Consensus 230 ~~~a~~ 235 (600)
+..++.
T Consensus 219 ~~~~~~ 224 (236)
T PF01370_consen 219 IVAALE 224 (236)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 887754
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-22 Score=208.53 Aligned_cols=260 Identities=38% Similarity=0.634 Sum_probs=190.6
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 332 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~ 332 (600)
+++++.+|+.+.+.+.++++..++|+|||+|+.........++...+..|+.++.+++++|.+.++++||++||.++||.
T Consensus 48 ~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~ 127 (328)
T TIGR01179 48 RVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGE 127 (328)
T ss_pred ceEEEECCCCCHHHHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCC
Confidence 57788999999999999987667999999999765555556777889999999999999999999899999999999997
Q ss_pred CCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH-hCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcce
Q psy16545 333 PQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV-TGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPY 410 (600)
Q Consensus 333 ~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~-~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~ 410 (600)
....+++|+++..|. +.|+.+| ..+|.+++.+.+. .+++++++||++ +|+.....
T Consensus 128 ~~~~~~~e~~~~~~~-~~y~~sK---~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~------------------- 184 (328)
T TIGR01179 128 PSSIPISEDSPLGPI-NPYGRSK---LMSERILRDLSKADPGLSYVILRYFNVAGADPEGT------------------- 184 (328)
T ss_pred CCCCCccccCCCCCC-CchHHHH---HHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCc-------------------
Confidence 766688999888765 7899999 7789999998877 799999999887 55422110
Q ss_pred EEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHH-HhCCCCceeecc--CCCCCcccchhhh
Q psy16545 411 IFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFER-VTGKPVPYIFYN--LGTGQGTSVLQLL 487 (600)
Q Consensus 411 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~g~~~~~~~~~ 487 (600)
+|... .+ ...++..+.. ..+...++..++ +..+++.+.
T Consensus 185 ----~~~~~---------------------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---- 225 (328)
T TIGR01179 185 ----IGEDP---------------------------PG----ITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCV---- 225 (328)
T ss_pred ----cccCC---------------------------cc----cchHHHHHHHHHHhCCCCeEEeCCcccCCCCceE----
Confidence 00000 00 0001111111 111111111111 111233433
Q ss_pred hhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCC---CCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccC
Q psy16545 488 RTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK---PVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEA 564 (600)
Q Consensus 488 ~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~---~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 564 (600)
++|+| ++|+++++..++.. ...+++||+++++++|++|+++.+++.+|.+.++...+
T Consensus 226 ~~~v~--------------------~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~ 285 (328)
T TIGR01179 226 RDYIH--------------------VMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAP 285 (328)
T ss_pred Eeeee--------------------HHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCC
Confidence 78888 88888888877753 23468999999999999999999999999877766555
Q ss_pred CCCCCccccccChHHHHHHcCceeeEE-EEe
Q psy16545 565 RREGDIVSMYANTDLAQRELGWSARCT-VKI 594 (600)
Q Consensus 565 ~~~~~~~~~~~d~~k~~~~lG~~p~~~-l~~ 594 (600)
....+......|++|++++|||+|+++ |+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~lg~~p~~~~l~~ 316 (328)
T TIGR01179 286 RRPGDPASLVADASKIRRELGWQPKYTDLEI 316 (328)
T ss_pred CCCccccchhcchHHHHHHhCCCCCcchHHH
Confidence 555555566789999999999999987 753
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-23 Score=219.22 Aligned_cols=210 Identities=17% Similarity=0.177 Sum_probs=152.7
Q ss_pred cCCCCcchHHHHHHHhhhccCC-CccEEecccc----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGK-PVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~-~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
.|||++||+|+++.+. |... +.+++++|+. .+|+.|.+.+.+ ++.
T Consensus 18 lVTGgtGfIGs~lv~~--L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~---------~~~- 85 (386)
T PLN02427 18 CMIGAGGFIGSHLCEK--LMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEG---------LIK- 85 (386)
T ss_pred EEECCcchHHHHHHHH--HHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHH---------Hhh-
Confidence 5899999999999553 2222 2333333421 578888888877 666
Q ss_pred CCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCC---------
Q psy16545 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPT--------- 135 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~--------- 135 (600)
++|+||||||...+.....++...+..|+.++.+|+++|++.+ ++||++||..+||.....+++|+.|.
T Consensus 86 -~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~ 163 (386)
T PLN02427 86 -MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVL 163 (386)
T ss_pred -cCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccc
Confidence 6999999999865433345566677899999999999999887 79999999999986433333333221
Q ss_pred ------------CCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCC-CCCcccchhHHHHHhhc
Q psy16545 136 ------------GNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGED-PTKSFTNIMPYLAQVAI 202 (600)
Q Consensus 136 ------------~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 202 (600)
..|.++|+.||.++|++++.+++.+ +++++++||++||||+.....+.. .......+++.+...+.
T Consensus 164 ~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~ 242 (386)
T PLN02427 164 KEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN-GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 242 (386)
T ss_pred cccccccccCCCCccccchHHHHHHHHHHHHHHHhhc-CCceEEecccceeCCCCCccccccccccccchHHHHHHHHHh
Confidence 0234689999999999999888776 999999999999999753221110 00112346666655555
Q ss_pred CCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 203 GSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 203 ~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
.++++.++|+|.+.|+|+|++|+++++..+
T Consensus 243 -~~~~~~~~g~g~~~r~~i~V~Dva~ai~~a 272 (386)
T PLN02427 243 -RREPLKLVDGGQSQRTFVYIKDAIEAVLLM 272 (386)
T ss_pred -cCCCeEEECCCCceECcEeHHHHHHHHHHH
Confidence 456788899999999999999999877655
|
|
| >KOG1431|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-23 Score=189.31 Aligned_cols=250 Identities=16% Similarity=0.168 Sum_probs=199.3
Q ss_pred EeecCChhhHHHHhhcCCccEEEEcccccC-ccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCCC
Q psy16545 258 SCDLVDKNRLGEIFAKHDIDCVIHFAAVKA-VGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL 336 (600)
Q Consensus 258 ~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~-~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~ 336 (600)
.+|+++..+.+.+|+..++.+|||+||+.+ .-....++..++..|+.-..|++..|.++|++++|+..|+++|......
T Consensus 38 d~DLt~~a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~y 117 (315)
T KOG1431|consen 38 DADLTNLADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSY 117 (315)
T ss_pred cccccchHHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCC
Confidence 579999999999999999999999999864 3445678899999999999999999999999999999999999999999
Q ss_pred CCCCCC----CCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCCCCcceEE
Q psy16545 337 PITEDH----PTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 412 (600)
Q Consensus 337 ~~~E~~----~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~ 412 (600)
|++|++ |+.|.+-.|+.+| ++..-.-+.|+.++|..++...|.|+
T Consensus 118 PIdEtmvh~gpphpsN~gYsyAK---r~idv~n~aY~~qhg~~~tsviPtNv---------------------------- 166 (315)
T KOG1431|consen 118 PIDETMVHNGPPHPSNFGYSYAK---RMIDVQNQAYRQQHGRDYTSVIPTNV---------------------------- 166 (315)
T ss_pred CCCHHHhccCCCCCCchHHHHHH---HHHHHHHHHHHHHhCCceeeeccccc----------------------------
Confidence 999997 5555545788888 77777779999999999998887763
Q ss_pred eeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhC-CCCceeeccCCCCCcccchhhhhhhh
Q psy16545 413 YNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTG-KPVPYIFYNLGTGQGTSVLQLLRTFE 491 (600)
Q Consensus 413 ~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~fi 491 (600)
|||.++++.++ ++++ ..++++++.... ..-++++ | |.|++. |.|+
T Consensus 167 --fGphDNfnpe~---------sHVl---------------Pali~r~h~ak~~gtd~~~V--w--GsG~Pl----RqFi 212 (315)
T KOG1431|consen 167 --FGPHDNFNPEN---------SHVL---------------PALIHRFHEAKRNGTDELTV--W--GSGSPL----RQFI 212 (315)
T ss_pred --cCCCCCCCccc---------ccch---------------HHHHHHHHHHHhcCCceEEE--e--cCCChH----HHHh
Confidence 45555443222 2333 345666644332 2224444 3 444544 9999
Q ss_pred hhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCC--CccHHHHHHHHhhhcCCcccccccCCCCCC
Q psy16545 492 RVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQ--GTSVLQLLRTFERVTGKPVPYIVEARREGD 569 (600)
Q Consensus 492 ~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~--~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~ 569 (600)
| ++|+++++...+..=..-+..+++.|+ .+|++|+++++.++.+..-+..+...++..
T Consensus 213 y--------------------s~DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~DG 272 (315)
T KOG1431|consen 213 Y--------------------SDDLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSDG 272 (315)
T ss_pred h--------------------HhHHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCCC
Confidence 9 888999999888765556789999998 899999999999999988888777767777
Q ss_pred ccccccChHHHHHHcCceeeEE-EE
Q psy16545 570 IVSMYANTDLAQRELGWSARCT-VK 593 (600)
Q Consensus 570 ~~~~~~d~~k~~~~lG~~p~~~-l~ 593 (600)
.....+|++|+++ |+|.|+.+ |+
T Consensus 273 q~kKtasnsKL~s-l~pd~~ft~l~ 296 (315)
T KOG1431|consen 273 QFKKTASNSKLRS-LLPDFKFTPLE 296 (315)
T ss_pred CcccccchHHHHH-hCCCcccChHH
Confidence 7778899999999 89999887 53
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-23 Score=216.28 Aligned_cols=199 Identities=18% Similarity=0.212 Sum_probs=157.9
Q ss_pred CCCCcchHHHHHHHhhhccCCC-------------------------ccEEecccccccccChHHhhhHHhhhhcccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKP-------------------------VPYIVEARREGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~-------------------------~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
|||++|++|+++.+.....+.. ++++ .+|++|.+++.+ +++
T Consensus 6 VtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~~~~---------~~~ 71 (355)
T PRK10217 6 ITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFE-----KVDICDRAELAR---------VFT 71 (355)
T ss_pred EEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEE-----ECCCcChHHHHH---------HHh
Confidence 7999999999996533221111 1223 679999888888 665
Q ss_pred cCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHH---------cCCCeEEEecCccccCCC--CCCCCCCC
Q psy16545 64 THDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKS---------HGVYQLVFSSSCTVYGEP--QFLPITED 132 (600)
Q Consensus 64 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~---------~~~~r~I~~SS~~vyg~~--~~~~~~E~ 132 (600)
..++|+||||||.........++...+++|+.|+.+++++|++ .+++++|++||..+||.. ...+++|+
T Consensus 72 ~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~ 151 (355)
T PRK10217 72 EHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTET 151 (355)
T ss_pred hcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCC
Confidence 4469999999998765444566788999999999999999986 246799999999999853 23468999
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEec
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG 212 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g 212 (600)
.+. .|.++|+.||.++|.+++.++++. +++++++||+++|||+.. ...+++.+...+. .+++++++|
T Consensus 152 ~~~-~p~s~Y~~sK~~~e~~~~~~~~~~-~~~~~i~r~~~v~Gp~~~----------~~~~~~~~~~~~~-~~~~~~~~g 218 (355)
T PRK10217 152 TPY-APSSPYSASKASSDHLVRAWLRTY-GLPTLITNCSNNYGPYHF----------PEKLIPLMILNAL-AGKPLPVYG 218 (355)
T ss_pred CCC-CCCChhHHHHHHHHHHHHHHHHHh-CCCeEEEeeeeeeCCCCC----------cccHHHHHHHHHh-cCCCceEeC
Confidence 888 899999999999999999998776 999999999999999642 1346776655555 446788899
Q ss_pred CCcccccCcceEEeeecccccc
Q psy16545 213 ADYETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 213 ~g~~~~~~~~v~d~v~~~~~a~ 234 (600)
+|.+.|+|+|++|+++++..++
T Consensus 219 ~g~~~~~~i~v~D~a~a~~~~~ 240 (355)
T PRK10217 219 NGQQIRDWLYVEDHARALYCVA 240 (355)
T ss_pred CCCeeeCcCcHHHHHHHHHHHH
Confidence 9999999999999998776553
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.2e-23 Score=214.88 Aligned_cols=209 Identities=15% Similarity=0.143 Sum_probs=155.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------ccccc-ChHHhhhHHhhhhcccccccCCCCEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIV-SMYANTDLAQKELGWSARCTHDIDCV 70 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~-~~~~~~~~~~~~~~~~~~~~~~~d~V 70 (600)
.|||++|++|+.+.+..... .+.+++++++. .+|++ +.+.+.+ ++. ++|+|
T Consensus 5 lVtGatGfiGs~l~~~L~~~-~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~---------~~~--~~d~V 72 (347)
T PRK11908 5 LILGVNGFIGHHLSKRILET-TDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEY---------HVK--KCDVI 72 (347)
T ss_pred EEECCCcHHHHHHHHHHHhC-CCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHH---------HHc--CCCEE
Confidence 48999999999996543211 12233333332 56776 4455555 555 79999
Q ss_pred EEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCC------CCCCChHHH
Q psy16545 71 IHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPT------GNIKNVYGK 144 (600)
Q Consensus 71 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~------~~p~s~Y~~ 144 (600)
||+||...+.....++...+++|+.++.+|+++|++.+ ++||++||..+||.....+++|+.++ ..|.++|+.
T Consensus 73 iH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~ 151 (347)
T PRK11908 73 LPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYAC 151 (347)
T ss_pred EECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHH
Confidence 99999866555567788899999999999999999988 69999999999996555566666431 145678999
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceE
Q psy16545 145 TKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKV 224 (600)
Q Consensus 145 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~ 224 (600)
||.++|++++.++.++ +++++++||+++|||+..+...... + ...+++.+...+. .++++.++++|.+.|+|+|++
T Consensus 152 sK~~~e~~~~~~~~~~-~~~~~ilR~~~v~Gp~~~~~~~~~~-~-~~~~i~~~~~~~~-~~~~~~~~~~g~~~r~~i~v~ 227 (347)
T PRK11908 152 SKQLMDRVIWAYGMEE-GLNFTLFRPFNWIGPGLDSIYTPKE-G-SSRVVTQFLGHIV-RGEPISLVDGGSQKRAFTDID 227 (347)
T ss_pred HHHHHHHHHHHHHHHc-CCCeEEEeeeeeeCCCccCCCcccc-C-CcchHHHHHHHHh-CCCceEEecCCceeeccccHH
Confidence 9999999999998776 9999999999999997654222211 1 1356776665555 446788889999999999999
Q ss_pred Eeeeccccc
Q psy16545 225 VAIDNFVNS 233 (600)
Q Consensus 225 d~v~~~~~a 233 (600)
|+++++..+
T Consensus 228 D~a~a~~~~ 236 (347)
T PRK11908 228 DGIDALMKI 236 (347)
T ss_pred HHHHHHHHH
Confidence 999877654
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-22 Score=206.74 Aligned_cols=249 Identities=16% Similarity=0.163 Sum_probs=172.4
Q ss_pred EEEeecCChhhHHHHhhc--CCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCC
Q psy16545 256 FYSCDLVDKNRLGEIFAK--HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP 333 (600)
Q Consensus 256 ~i~~Dl~~~~~l~~~l~~--~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~ 333 (600)
.+.+|+.+.+.+..+.+. .++|+|||+|+... ....++...++.|+.++.+++++|++.++ +|||+||..|||..
T Consensus 45 ~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~--~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~ 121 (314)
T TIGR02197 45 VIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSD--TTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDG 121 (314)
T ss_pred eeeccCcchhHHHHHHhhccCCCCEEEECccccC--ccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCC
Confidence 456778777766665431 47999999999753 23457778899999999999999999886 89999999999975
Q ss_pred CCCCCCCCCCC-CCCCcccccchhhHHHHHHHHHHHHH--HhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcc
Q psy16545 334 QFLPITEDHPT-GNIKNFYNLGTGQGTSVLQLLRTFER--VTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVP 409 (600)
Q Consensus 334 ~~~~~~E~~~~-~~~~~~Y~~sK~~~~~~E~~~~~~~~--~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~ 409 (600)
. .+.+|+++. .| .++|+.+| ..+|.+++.+.. ..+++++++|+++ +|+++....
T Consensus 122 ~-~~~~e~~~~~~p-~~~Y~~sK---~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~----------------- 179 (314)
T TIGR02197 122 E-AGFREGRELERP-LNVYGYSK---FLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKG----------------- 179 (314)
T ss_pred C-CCcccccCcCCC-CCHHHHHH---HHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCC-----------------
Confidence 4 356666654 35 48999999 789999987643 2357899999877 554322100
Q ss_pred eEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhh
Q psy16545 410 YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRT 489 (600)
Q Consensus 410 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 489 (600)
+ +..+ +..++..+ ..+.++.+.-.....++|.+. |+
T Consensus 180 --------~----~~~~--------------------------~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~----~~ 215 (314)
T TIGR02197 180 --------K----MASV--------------------------AFHLFNQI--KAGGNVKLFKSSEGFKDGEQL----RD 215 (314)
T ss_pred --------C----cccH--------------------------HHHHHHHH--hcCCCeEEecCccccCCCCce----ee
Confidence 0 0000 01111111 123333321000112345544 88
Q ss_pred hhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCCCC-
Q psy16545 490 FERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREG- 568 (600)
Q Consensus 490 fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~- 568 (600)
|+| ++|+++++..++.. ..+++||+++++++|++|+++.+.+.+|.+.++...+....
T Consensus 216 ~i~--------------------v~D~a~~i~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~ 274 (314)
T TIGR02197 216 FVY--------------------VKDVVDVNLWLLEN-GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEAL 274 (314)
T ss_pred eEE--------------------HHHHHHHHHHHHhc-ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCcccc
Confidence 988 88999999988876 45679999999999999999999999997654444433221
Q ss_pred ---CccccccChHHHHHHcCceeeEEEEe
Q psy16545 569 ---DIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 569 ---~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
......+|++|+++++||+|+++++.
T Consensus 275 ~~~~~~~~~~~~~k~~~~l~~~p~~~l~~ 303 (314)
T TIGR02197 275 RGKYQYFTQADITKLRAAGYYGPFTTLEE 303 (314)
T ss_pred ccccccccccchHHHHHhcCCCCcccHHH
Confidence 22345789999999999999999874
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-23 Score=207.42 Aligned_cols=201 Identities=23% Similarity=0.171 Sum_probs=151.8
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccCCCCEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTHDIDCV 70 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~V 70 (600)
|||++||+|+++.+.....+...++.++|++ .+|++|++++.+ +++ ++|+|
T Consensus 2 VTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~---------a~~--g~d~V 70 (280)
T PF01073_consen 2 VTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEE---------ALE--GVDVV 70 (280)
T ss_pred EEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHH---------Hhc--CCceE
Confidence 7999999999995422111110222222222 689999999999 887 89999
Q ss_pred EEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCC-CCCC---CCCCCCCC-CCCChHHHH
Q psy16545 71 IHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP-QFLP---ITEDHPTG-NIKNVYGKT 145 (600)
Q Consensus 71 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~-~~~~---~~E~~~~~-~p~s~Y~~s 145 (600)
||+|+...... ....+.++++|+.||++|+++|++.+++||||+||.++++.. ...+ .+|+.+.. .+.+.|+.|
T Consensus 71 ~H~Aa~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~S 149 (280)
T PF01073_consen 71 FHTAAPVPPWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAES 149 (280)
T ss_pred EEeCccccccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHH
Confidence 99999875432 355677999999999999999999999999999999998752 1223 25665431 366789999
Q ss_pred HHHHHHHHHHHHh---hc-CCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCc
Q psy16545 146 KHFIEEMLKDLSK---AH-KEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGT 221 (600)
Q Consensus 146 K~~~e~~~~~~~~---~~-~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~ 221 (600)
|+.+|++++++.. +. ..+.+++|||..||||++. .+.+.+.+... .+......|+|....+++
T Consensus 150 K~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~------------~~~~~~~~~~~-~g~~~~~~g~~~~~~~~v 216 (280)
T PF01073_consen 150 KALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQ------------RLVPRLVKMVR-SGLFLFQIGDGNNLFDFV 216 (280)
T ss_pred HHHHHHHHHhhcccccccccceeEEEEeccEEeCcccc------------cccchhhHHHH-hcccceeecCCCceECcE
Confidence 9999999998876 21 2589999999999999743 35666666554 344556689999999999
Q ss_pred ceEEeeecccccc
Q psy16545 222 GKVVAIDNFVNSV 234 (600)
Q Consensus 222 ~v~d~v~~~~~a~ 234 (600)
|++|++++++.+.
T Consensus 217 yV~NvA~ahvlA~ 229 (280)
T PF01073_consen 217 YVENVAHAHVLAA 229 (280)
T ss_pred eHHHHHHHHHHHH
Confidence 9999999888764
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.3e-22 Score=208.47 Aligned_cols=241 Identities=15% Similarity=0.195 Sum_probs=168.7
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccCh-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEecCcccc
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEP-LMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVY 330 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~-~~~~~~Nv~gt~~ll~~~~~~~-~~r~v~~SS~~vY 330 (600)
.++++.+|+.+...+.++++ ++|+|||+|+.... ...++ ...++.|+.++.+++++|++++ ++||||+||.++|
T Consensus 57 ~~~~v~~Dl~d~~~~~~~~~--~~d~ViH~A~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~ 132 (351)
T PLN02650 57 RLTLWKADLAVEGSFDDAIR--GCTGVFHVATPMDF--ESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTV 132 (351)
T ss_pred ceEEEEecCCChhhHHHHHh--CCCEEEEeCCCCCC--CCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhc
Confidence 57899999999999999888 78999999987532 22344 4688999999999999999987 7899999999877
Q ss_pred cCC-CCCC-CCCCCCC--------CCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHH
Q psy16545 331 GEP-QFLP-ITEDHPT--------GNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTF 399 (600)
Q Consensus 331 g~~-~~~~-~~E~~~~--------~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~ 399 (600)
+.. ...+ ++|+.+. .++.++|+.|| ..+|.+++.|.+.++++++++||++ +||+.....
T Consensus 133 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK---~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~------- 202 (351)
T PLN02650 133 NVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSK---TLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSM------- 202 (351)
T ss_pred ccCCCCCCccCcccCCchhhhhccccccchHHHHH---HHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCC-------
Confidence 643 2233 4666321 11235899999 8899999999999999999999887 554322110
Q ss_pred HHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCC
Q psy16545 400 ERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQ 479 (600)
Q Consensus 400 ~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 479 (600)
+ ..++..+....+..... + ..
T Consensus 203 ---------------------------------------~--------------~~~~~~~~~~~~~~~~~-----~-~~ 223 (351)
T PLN02650 203 ---------------------------------------P--------------PSLITALSLITGNEAHY-----S-II 223 (351)
T ss_pred ---------------------------------------C--------------ccHHHHHHHhcCCcccc-----C-cC
Confidence 0 00111111111222111 0 11
Q ss_pred cccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCc-c
Q psy16545 480 GTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP-V 558 (600)
Q Consensus 480 ~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~-~ 558 (600)
+. |+|+| |+|+++++..++..+..++.| +++++.+|++|+++++.+.++.. .
T Consensus 224 ~~------r~~v~--------------------V~Dva~a~~~~l~~~~~~~~~-i~~~~~~s~~el~~~i~~~~~~~~~ 276 (351)
T PLN02650 224 KQ------GQFVH--------------------LDDLCNAHIFLFEHPAAEGRY-ICSSHDATIHDLAKMLREKYPEYNI 276 (351)
T ss_pred CC------cceee--------------------HHHHHHHHHHHhcCcCcCceE-EecCCCcCHHHHHHHHHHhCcccCC
Confidence 11 78888 999999999988765445688 56678899999999999988732 2
Q ss_pred cccccCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 559 PYIVEARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 559 ~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
+... +.+..+.....+|++|++ .|||+|+++|+.+
T Consensus 277 ~~~~-~~~~~~~~~~~~d~~k~~-~lG~~p~~~l~eg 311 (351)
T PLN02650 277 PARF-PGIDEDLKSVEFSSKKLT-DLGFTFKYSLEDM 311 (351)
T ss_pred CCCC-CCcCcccccccCChHHHH-HhCCCCCCCHHHH
Confidence 2221 222345566678999985 5999999998753
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.9e-22 Score=207.86 Aligned_cols=247 Identities=17% Similarity=0.127 Sum_probs=170.3
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChH-HHHHHHHHHHHHHHHHHHHc-CCCEEEEecCcccc
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPL-MYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTVY 330 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~-~~~~~Nv~gt~~ll~~~~~~-~~~r~v~~SS~~vY 330 (600)
.++++.+|+.+...+.+++. ++|+|||+|+... ....++. ..++.|+.++.+++++|++. +++||||+||.++|
T Consensus 60 ~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A~~~~--~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~ 135 (338)
T PLN00198 60 DLKIFGADLTDEESFEAPIA--GCDLVFHVATPVN--FASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAV 135 (338)
T ss_pred ceEEEEcCCCChHHHHHHHh--cCCEEEEeCCCCc--cCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceee
Confidence 57899999999999999887 7899999998642 2223454 46799999999999999887 58999999999999
Q ss_pred cCCC----CCCCCCCCC--------CCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHH
Q psy16545 331 GEPQ----FLPITEDHP--------TGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLR 397 (600)
Q Consensus 331 g~~~----~~~~~E~~~--------~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~ 397 (600)
|... ..+++|+.. ..++.++|+.|| ..+|.+++.|.+.++++++++||++ +||+.....
T Consensus 136 g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK---~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~----- 207 (338)
T PLN00198 136 SINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASK---TLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDI----- 207 (338)
T ss_pred eccCCCCCCceeccccCCchhhhhhcCCccchhHHHH---HHHHHHHHHHHHhcCceEEEEeCCceECCCccCCC-----
Confidence 8532 335566521 112347899999 8899999999999999999999887 554322110
Q ss_pred HHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCC
Q psy16545 398 TFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGT 477 (600)
Q Consensus 398 ~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (600)
|.. +. ++. ....++++.+. +
T Consensus 208 -----------------------------------------~~~-----------~~-~~~--~~~~~~~~~~~----g- 227 (338)
T PLN00198 208 -----------------------------------------PSS-----------LS-LAM--SLITGNEFLIN----G- 227 (338)
T ss_pred -----------------------------------------CCc-----------HH-HHH--HHHcCCccccc----c-
Confidence 000 00 000 11123333220 1
Q ss_pred CCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCC-
Q psy16545 478 GQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK- 556 (600)
Q Consensus 478 g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~- 556 (600)
..+.+..+-.|+|+| |+|+++++..++.....++.|+ +++..+|++|+++++.+.++.
T Consensus 228 ~~~~~~~~~~~~~i~--------------------V~D~a~a~~~~~~~~~~~~~~~-~~~~~~s~~el~~~i~~~~~~~ 286 (338)
T PLN00198 228 LKGMQMLSGSISITH--------------------VEDVCRAHIFLAEKESASGRYI-CCAANTSVPELAKFLIKRYPQY 286 (338)
T ss_pred ccccccccCCcceeE--------------------HHHHHHHHHHHhhCcCcCCcEE-EecCCCCHHHHHHHHHHHCCCC
Confidence 012211111278988 8999999998887654455785 557789999999999998863
Q ss_pred cccccccCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 557 PVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
+++..+.+.. ......+|++|+++ +||+|+++|+.+
T Consensus 287 ~~~~~~~~~~--~~~~~~~~~~k~~~-~G~~p~~~l~~g 322 (338)
T PLN00198 287 QVPTDFGDFP--SKAKLIISSEKLIS-EGFSFEYGIEEI 322 (338)
T ss_pred CCCccccccC--CCCccccChHHHHh-CCceecCcHHHH
Confidence 3333332211 23456789999998 699999998753
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.6e-22 Score=200.33 Aligned_cols=232 Identities=19% Similarity=0.189 Sum_probs=172.7
Q ss_pred EeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCCCC
Q psy16545 258 SCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLP 337 (600)
Q Consensus 258 ~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~~ 337 (600)
.+|+.+.+.+.++++..++|+|||+|+.........++...++.|+.++.+++++|++.+. +||++||.+||+.....+
T Consensus 33 ~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~ 111 (287)
T TIGR01214 33 QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRP 111 (287)
T ss_pred ccCCCCHHHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCC
Confidence 4689999999999987678999999997654444556778899999999999999999885 999999999999877778
Q ss_pred CCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEEeeCC
Q psy16545 338 ITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLG 416 (600)
Q Consensus 338 ~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g 416 (600)
++|+++..|. ++|+.+| ..+|..++.+ +.+++++||+. +|++++..+.
T Consensus 112 ~~E~~~~~~~-~~Y~~~K---~~~E~~~~~~----~~~~~ilR~~~v~G~~~~~~~~----------------------- 160 (287)
T TIGR01214 112 YREDDATNPL-NVYGQSK---LAGEQAIRAA----GPNALIVRTSWLYGGGGGRNFV----------------------- 160 (287)
T ss_pred CCCCCCCCCc-chhhHHH---HHHHHHHHHh----CCCeEEEEeeecccCCCCCCHH-----------------------
Confidence 9999988775 8999999 7789888765 67999999987 5554322210
Q ss_pred CCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhhhcCC
Q psy16545 417 TGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK 496 (600)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~ 496 (600)
..++..+. .+.++++. +++. ++|+|
T Consensus 161 -------------------------------------~~~~~~~~--~~~~~~~~------~~~~------~~~v~---- 185 (287)
T TIGR01214 161 -------------------------------------RTMLRLAG--RGEELRVV------DDQI------GSPTY---- 185 (287)
T ss_pred -------------------------------------HHHHHHhh--cCCCceEe------cCCC------cCCcC----
Confidence 01111110 12233321 2222 67777
Q ss_pred CccccccCCCCCcchhHHHHHHHhhhhcCCC-CceeEeEcCCCCCccHHHHHHHHhhhcCCcccccc-----------cC
Q psy16545 497 PVPYIFYNLGTGQGTSVLQLLRTFERVTGKP-VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIV-----------EA 564 (600)
Q Consensus 497 ~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~-~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~-----------~~ 564 (600)
++|+++++..++... ..+++||+++++.+|+.|+++.+.+.+|.+..... .+
T Consensus 186 ----------------v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (287)
T TIGR01214 186 ----------------AKDLARVIAALLQRLARARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYP 249 (287)
T ss_pred ----------------HHHHHHHHHHHHhhccCCCCeEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcC
Confidence 899999999988765 45789999999999999999999999997543111 01
Q ss_pred CCCCCccccccChHHHHHHcCceeeEEEE
Q psy16545 565 RREGDIVSMYANTDLAQRELGWSARCTVK 593 (600)
Q Consensus 565 ~~~~~~~~~~~d~~k~~~~lG~~p~~~l~ 593 (600)
..........+|++|++++||| +.++++
T Consensus 250 ~~~~~~~~~~~d~~~~~~~lg~-~~~~~~ 277 (287)
T TIGR01214 250 RPARRPAYSVLDNTKLVKTLGT-PLPHWR 277 (287)
T ss_pred CCCCCCCccccchHHHHHHcCC-CCccHH
Confidence 1122335668999999999999 445765
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-22 Score=209.64 Aligned_cols=241 Identities=17% Similarity=0.116 Sum_probs=178.3
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecCc--cc
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSC--TV 329 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~r~v~~SS~--~v 329 (600)
.++++.+|+++.+.+.++++ ++|+|||+|+...............+.|+.++.+++++|++. +++||||+||. .+
T Consensus 108 ~~~~v~~Dl~d~~~l~~~i~--~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~v 185 (367)
T PLN02686 108 GIWTVMANLTEPESLHEAFD--GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACV 185 (367)
T ss_pred ceEEEEcCCCCHHHHHHHHH--hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhc
Confidence 47889999999999999988 789999999976432211122355678999999999999986 79999999996 58
Q ss_pred ccCC--CC--CCCCCCCCCC-----CCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHH
Q psy16545 330 YGEP--QF--LPITEDHPTG-----NIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTF 399 (600)
Q Consensus 330 Yg~~--~~--~~~~E~~~~~-----~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~ 399 (600)
||.. .. .+++|+.+.. .+.++|+.|| ..+|.+++.+.+.++++++++||++ +||+.....
T Consensus 186 yg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK---~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~------- 255 (367)
T PLN02686 186 WRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGK---LKAEKAAWRAARGKGLKLATICPALVTGPGFFRRN------- 255 (367)
T ss_pred ccccCCCCCCcccCCCCCCChhhcccccchHHHHH---HHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCC-------
Confidence 8742 22 3466764321 1236899999 8899999999988999999999887 444321100
Q ss_pred HHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCC
Q psy16545 400 ERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQ 479 (600)
Q Consensus 400 ~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 479 (600)
| ..++. ...+ .+++ .++
T Consensus 256 ---------------------------------------~--------------~~~~~---~~~g-~~~~------~g~ 272 (367)
T PLN02686 256 ---------------------------------------S--------------TATIA---YLKG-AQEM------LAD 272 (367)
T ss_pred ---------------------------------------C--------------hhHHH---HhcC-CCcc------CCC
Confidence 0 00001 1112 2222 134
Q ss_pred cccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCC---CCceeEeEcCCCCCccHHHHHHHHhhhcCC
Q psy16545 480 GTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK---PVPYIFYNLGTGQGTSVLQLLRTFERVTGK 556 (600)
Q Consensus 480 ~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~---~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~ 556 (600)
|. ++|+| |+|+++++..+++. ...+++| +++++.+|++|+++.+.+++|.
T Consensus 273 g~------~~~v~--------------------V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~ 325 (367)
T PLN02686 273 GL------LATAD--------------------VERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGL 325 (367)
T ss_pred CC------cCeEE--------------------HHHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCC
Confidence 44 56777 88999999888764 2346788 8889999999999999999998
Q ss_pred cccccccCCC-CCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 557 PVPYIVEARR-EGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 557 ~~~~~~~~~~-~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
+......+.+ ++++..+.+|++|++++|||+|+...+.+
T Consensus 326 ~~~~~~~~~~~~~d~~~~~~d~~kl~~~l~~~~~~~~~~~ 365 (367)
T PLN02686 326 PINKIAGNSSSDDTPARFELSNKKLSRLMSRTRRCCYDES 365 (367)
T ss_pred CCCcCCCchhhcCCcccccccHHHHHHHHHHhhhcccccc
Confidence 8777777766 78889999999999999999999887654
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.7e-22 Score=204.23 Aligned_cols=239 Identities=13% Similarity=0.155 Sum_probs=171.1
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChH-HHHHHHHHHHHHHHHHHHHc-CCCEEEEecCcc-
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPL-MYYKNNLIATINLLEVMKSH-GVYQLVFSSSCT- 328 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~-~~~~~Nv~gt~~ll~~~~~~-~~~r~v~~SS~~- 328 (600)
..++++.+|+.++..+.++++ ++|+|||+|+... ....++. ..++.|+.++.+++++|++. +++||||+||.+
T Consensus 55 ~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A~~~~--~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~ 130 (322)
T PLN02662 55 ERLHLFKANLLEEGSFDSVVD--GCEGVFHTASPFY--HDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAA 130 (322)
T ss_pred CceEEEeccccCcchHHHHHc--CCCEEEEeCCccc--CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHH
Confidence 467899999999999999988 7899999998743 2334564 78899999999999999987 899999999976
Q ss_pred -cccCC---CCCCCCCCCCCCCC-----CcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHH
Q psy16545 329 -VYGEP---QFLPITEDHPTGNI-----KNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRT 398 (600)
Q Consensus 329 -vYg~~---~~~~~~E~~~~~~~-----~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~ 398 (600)
+|+.. ...+++|+.+..|. .+.|+.+| ..+|.+++.+.+.++++++++||++ +||+......
T Consensus 131 ~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK---~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~----- 202 (322)
T PLN02662 131 VAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSK---TLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLN----- 202 (322)
T ss_pred hcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHH---HHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCC-----
Confidence 47542 23467888765542 25799999 8899999999988999999999887 4443211000
Q ss_pred HHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCC
Q psy16545 399 FERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTG 478 (600)
Q Consensus 399 ~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 478 (600)
. ...++..+ ..+++. . +
T Consensus 203 ----------------------------------------------------~-~~~~~~~~--~~~~~~-~-------~ 219 (322)
T PLN02662 203 ----------------------------------------------------T-SAEAILNL--INGAQT-F-------P 219 (322)
T ss_pred ----------------------------------------------------c-hHHHHHHH--hcCCcc-C-------C
Confidence 0 00011111 112221 0 2
Q ss_pred CcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcc
Q psy16545 479 QGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV 558 (600)
Q Consensus 479 ~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~ 558 (600)
++. ++|+| |+|+++++..++..+...+.||++ +..+|++|+++++.+.++...
T Consensus 220 ~~~------~~~i~--------------------v~Dva~a~~~~~~~~~~~~~~~~~-g~~~s~~e~~~~i~~~~~~~~ 272 (322)
T PLN02662 220 NAS------YRWVD--------------------VRDVANAHIQAFEIPSASGRYCLV-ERVVHYSEVVKILHELYPTLQ 272 (322)
T ss_pred CCC------cCeEE--------------------HHHHHHHHHHHhcCcCcCCcEEEe-CCCCCHHHHHHHHHHHCCCCC
Confidence 222 88988 999999999988875445689997 678999999999999987421
Q ss_pred cccccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 559 PYIVEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 559 ~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
.....+.+..+.....+|++|+++ |||+| ++|+.
T Consensus 273 ~~~~~~~~~~~~~~~~~d~~k~~~-lg~~~-~~~~~ 306 (322)
T PLN02662 273 LPEKCADDKPYVPTYQVSKEKAKS-LGIEF-IPLEV 306 (322)
T ss_pred CCCCCCCccccccccccChHHHHH-hCCcc-ccHHH
Confidence 111111122345667899999996 99997 57764
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.4e-22 Score=207.62 Aligned_cols=249 Identities=15% Similarity=0.165 Sum_probs=168.3
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccc--cccChHHHH-----HHHHHHHHHHHHHHHHcC-CCEEEE
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGE--SMQEPLMYY-----KNNLIATINLLEVMKSHG-VYQLVF 323 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~--~~~~~~~~~-----~~Nv~gt~~ll~~~~~~~-~~r~v~ 323 (600)
.+++++.+|+.+...+.+++. ++|+|||+|+...... ...++..++ +.|+.++.+++++|++.+ +++||+
T Consensus 58 ~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~ 135 (353)
T PLN02896 58 DRLRLFRADLQEEGSFDEAVK--GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVF 135 (353)
T ss_pred CeEEEEECCCCCHHHHHHHHc--CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEE
Confidence 468899999999999999887 7899999999865432 233454444 445699999999999875 889999
Q ss_pred ecCcccccCCC-----CCCCCCCCC--C------CCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCc
Q psy16545 324 SSSCTVYGEPQ-----FLPITEDHP--T------GNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQG 389 (600)
Q Consensus 324 ~SS~~vYg~~~-----~~~~~E~~~--~------~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~ 389 (600)
+||.++||... ..+++|+.+ . .+..++|+.|| ..+|.+++.|.+.++++++++|+++ +||+..
T Consensus 136 ~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK---~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~ 212 (353)
T PLN02896 136 TSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSK---LLTEEAAFKYAKENGIDLVSVITTTVAGPFLT 212 (353)
T ss_pred EechhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHH---HHHHHHHHHHHHHcCCeEEEEcCCcccCCCcC
Confidence 99999998532 135677632 1 12235899999 8899999999999999999999887 555332
Q ss_pred chHHHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCc
Q psy16545 390 TSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP 469 (600)
Q Consensus 390 ~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (600)
..+...+ ..+.. .+.|.+..
T Consensus 213 ~~~~~~~---------------------------------------------------------~~~~~---~~~g~~~~ 232 (353)
T PLN02896 213 PSVPSSI---------------------------------------------------------QVLLS---PITGDSKL 232 (353)
T ss_pred CCCCchH---------------------------------------------------------HHHHH---HhcCCccc
Confidence 1110000 01110 11122111
Q ss_pred eeec-cCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHH
Q psy16545 470 YIFY-NLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLR 548 (600)
Q Consensus 470 ~~~~-~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~ 548 (600)
+-.. +.....+. |+|+| |+|+++++..++..+..+++||+ +++++|++|+++
T Consensus 233 ~~~~~~~~~~~~~------~dfi~--------------------v~Dva~a~~~~l~~~~~~~~~~~-~~~~~s~~el~~ 285 (353)
T PLN02896 233 FSILSAVNSRMGS------IALVH--------------------IEDICDAHIFLMEQTKAEGRYIC-CVDSYDMSELIN 285 (353)
T ss_pred cccccccccccCc------eeEEe--------------------HHHHHHHHHHHHhCCCcCccEEe-cCCCCCHHHHHH
Confidence 0000 00001112 68888 89999999988876544557865 578999999999
Q ss_pred HHhhhcCCc-ccccccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 549 TFERVTGKP-VPYIVEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 549 ~~~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
++.+.++.. ..+.+.+.+..+.+ ...|++|+++ |||+|+++|+.
T Consensus 286 ~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-lGw~p~~~l~~ 330 (353)
T PLN02896 286 HLSKEYPCSNIQVRLDEEKRGSIP-SEISSKKLRD-LGFEYKYGIEE 330 (353)
T ss_pred HHHHhCCCCCccccccccccCccc-cccCHHHHHH-cCCCccCCHHH
Confidence 999999742 33333333333333 3568999975 99999999864
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=210.84 Aligned_cols=205 Identities=19% Similarity=0.191 Sum_probs=153.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIH 72 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih 72 (600)
.|||++|++|+++.+.... .+.++++++|. .+|+++.+.+.+ ++. ++|+|||
T Consensus 25 lVtGgtGfIG~~l~~~L~~--~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~--~~D~Vih 91 (370)
T PLN02695 25 CITGAGGFIASHIARRLKA--EGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLK---------VTK--GVDHVFN 91 (370)
T ss_pred EEECCccHHHHHHHHHHHh--CCCEEEEEEeccccccccccccceEEECCCCCHHHHHH---------HHh--CCCEEEE
Confidence 5899999999999664432 23344444432 368887777666 555 7899999
Q ss_pred cCcccCcc-cCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCC----CCCCCCC--CCCCCCChHHHH
Q psy16545 73 FAAVKAVG-ESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQF----LPITEDH--PTGNIKNVYGKT 145 (600)
Q Consensus 73 ~A~~~~~~-~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~----~~~~E~~--~~~~p~s~Y~~s 145 (600)
+|+..... ....++...+..|+.++.+|+++|++.++++||++||..+||.... .++.|+. +. .|.++|+.+
T Consensus 92 ~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~-~p~s~Yg~s 170 (370)
T PLN02695 92 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA-EPQDAYGLE 170 (370)
T ss_pred cccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCC-CCCCHHHHH
Confidence 99976421 1223455678899999999999999999999999999999986432 2466664 66 788999999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEE
Q psy16545 146 KHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVV 225 (600)
Q Consensus 146 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d 225 (600)
|.++|++++.+++.+ +++++++||+++|||+.... +....+.+.+...+...+++++++++|.+.|+|+|++|
T Consensus 171 K~~~E~~~~~~~~~~-g~~~~ilR~~~vyGp~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D 243 (370)
T PLN02695 171 KLATEELCKHYTKDF-GIECRIGRFHNIYGPFGTWK------GGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDE 243 (370)
T ss_pred HHHHHHHHHHHHHHh-CCCEEEEEECCccCCCCCcc------ccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHH
Confidence 999999999988776 99999999999999964311 11122344555444434467899999999999999999
Q ss_pred eeeccccc
Q psy16545 226 AIDNFVNS 233 (600)
Q Consensus 226 ~v~~~~~a 233 (600)
+++.+...
T Consensus 244 ~a~ai~~~ 251 (370)
T PLN02695 244 CVEGVLRL 251 (370)
T ss_pred HHHHHHHH
Confidence 98866543
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.8e-23 Score=207.46 Aligned_cols=190 Identities=24% Similarity=0.209 Sum_probs=147.1
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCChhh
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLM 88 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~ 88 (600)
|||++|++|+++.+. +...+.+++..++...|+.|.+.+.+ .+...++|+||||||..++..++.++..
T Consensus 5 I~GasG~lG~~l~~~--l~~~~~~v~~~~r~~~dl~d~~~~~~---------~~~~~~pd~Vin~aa~~~~~~ce~~p~~ 73 (286)
T PF04321_consen 5 ITGASGFLGSALARA--LKERGYEVIATSRSDLDLTDPEAVAK---------LLEAFKPDVVINCAAYTNVDACEKNPEE 73 (286)
T ss_dssp EETTTSHHHHHHHHH--HTTTSEEEEEESTTCS-TTSHHHHHH---------HHHHH--SEEEE------HHHHHHSHHH
T ss_pred EECCCCHHHHHHHHH--HhhCCCEEEEeCchhcCCCCHHHHHH---------HHHHhCCCeEeccceeecHHhhhhChhh
Confidence 799999999999664 44466788888999999999999988 6665689999999999988888899999
Q ss_pred hHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEE
Q psy16545 89 YYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISL 168 (600)
Q Consensus 89 ~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~il 168 (600)
.+++|+.++.+|+++|.+.++ ++||+||..||++....|++|++++ .|.+.||++|+.+|+.+++... +.+|+
T Consensus 74 a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~-~P~~~YG~~K~~~E~~v~~~~~-----~~~Il 146 (286)
T PF04321_consen 74 AYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPP-NPLNVYGRSKLEGEQAVRAACP-----NALIL 146 (286)
T ss_dssp HHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS-----SSHHHHHHHHHHHHHHHH-S-----SEEEE
T ss_pred hHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCC-CCCCHHHHHHHHHHHHHHHhcC-----CEEEE
Confidence 999999999999999999997 9999999999988777889999999 8999999999999999988543 66999
Q ss_pred ecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccc
Q psy16545 169 RYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFV 231 (600)
Q Consensus 169 R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~ 231 (600)
|++++||+.. .+++..+.+.+. .++++.+..| +.+.++++.|+++.+.
T Consensus 147 R~~~~~g~~~------------~~~~~~~~~~~~-~~~~i~~~~d--~~~~p~~~~dlA~~i~ 194 (286)
T PF04321_consen 147 RTSWVYGPSG------------RNFLRWLLRRLR-QGEPIKLFDD--QYRSPTYVDDLARVIL 194 (286)
T ss_dssp EE-SEESSSS------------SSHHHHHHHHHH-CTSEEEEESS--CEE--EEHHHHHHHHH
T ss_pred ecceecccCC------------CchhhhHHHHHh-cCCeeEeeCC--ceeCCEEHHHHHHHHH
Confidence 9999999941 457888888776 6789988775 6778888888776544
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >KOG1429|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.5e-23 Score=194.64 Aligned_cols=204 Identities=19% Similarity=0.226 Sum_probs=161.6
Q ss_pred ccCCCCcchHHHHHHHhhhccCCCccEEeccccc---------------ccccChHHhhhHHhhhhcccccccCCCCEEE
Q psy16545 7 NLGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE---------------GDIVSMYANTDLAQKELGWSARCTHDIDCVI 71 (600)
Q Consensus 7 ~~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~---------------~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vi 71 (600)
=+|||++||+|.+|.+ +|...+.+++++|--- +++.--+-+.. ++. .+|.|+
T Consensus 30 I~itGgaGFIgSHLvd--kLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p---------l~~--evD~Iy 96 (350)
T KOG1429|consen 30 ILITGGAGFIGSHLVD--KLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP---------LLK--EVDQIY 96 (350)
T ss_pred EEEecCcchHHHHHHH--HHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH---------HHH--Hhhhhh
Confidence 3689999999999966 5555666777333210 00100011112 222 689999
Q ss_pred EcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCC-----CCCCCCChHHHHH
Q psy16545 72 HFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDH-----PTGNIKNVYGKTK 146 (600)
Q Consensus 72 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~-----~~~~p~s~Y~~sK 146 (600)
|+|+..++.....++-..+.+|+.+|.+++..|++.+ +||++.||+.|||.+...|..|+. |. .|.++|...|
T Consensus 97 hLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpi-gpr~cydegK 174 (350)
T KOG1429|consen 97 HLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPI-GPRSCYDEGK 174 (350)
T ss_pred hhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcC-CchhhhhHHH
Confidence 9999999888888999999999999999999999998 599999999999998878887775 44 6789999999
Q ss_pred HHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEe
Q psy16545 147 HFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVA 226 (600)
Q Consensus 147 ~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~ 226 (600)
..+|.++..+.++. |+++.|.|++++|||..+.. ..+++..|...+. +++++++||+|.|.|+|++|.|+
T Consensus 175 r~aE~L~~~y~k~~-giE~rIaRifNtyGPrm~~~--------dgrvvsnf~~q~l-r~epltv~g~G~qtRSF~yvsD~ 244 (350)
T KOG1429|consen 175 RVAETLCYAYHKQE-GIEVRIARIFNTYGPRMHMD--------DGRVVSNFIAQAL-RGEPLTVYGDGKQTRSFQYVSDL 244 (350)
T ss_pred HHHHHHHHHhhccc-CcEEEEEeeecccCCccccC--------CChhhHHHHHHHh-cCCCeEEEcCCcceEEEEeHHHH
Confidence 99999999999987 99999999999999964431 1456665555555 66899999999999999999999
Q ss_pred eeccccccc
Q psy16545 227 IDNFVNSVH 235 (600)
Q Consensus 227 v~~~~~a~~ 235 (600)
++.+...++
T Consensus 245 Vegll~Lm~ 253 (350)
T KOG1429|consen 245 VEGLLRLME 253 (350)
T ss_pred HHHHHHHhc
Confidence 988776654
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.7e-23 Score=216.65 Aligned_cols=201 Identities=20% Similarity=0.264 Sum_probs=149.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccccc---------------cccChHHhhhHHhhhhcccccccCCCCEEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARREG---------------DIVSMYANTDLAQKELGWSARCTHDIDCVIH 72 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~---------------Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih 72 (600)
.|||++|++|+++.+ .|...+.+++++|+... ++.+.+.+.. ++. ++|+|||
T Consensus 123 LVTGatGfIGs~Lv~--~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~---------~l~--~~D~ViH 189 (442)
T PLN02206 123 VVTGGAGFVGSHLVD--RLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP---------ILL--EVDQIYH 189 (442)
T ss_pred EEECcccHHHHHHHH--HHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh---------hhc--CCCEEEE
Confidence 589999999999965 44444556665543210 0000011111 222 6899999
Q ss_pred cCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCC-----CCCCCCChHHHHHH
Q psy16545 73 FAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDH-----PTGNIKNVYGKTKH 147 (600)
Q Consensus 73 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~-----~~~~p~s~Y~~sK~ 147 (600)
+|+...+.....++...+++|+.++.+|+++|++.++ +||++||+.+||.....+.+|+. |. .+.++|+.||.
T Consensus 190 lAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~-~~~s~Y~~SK~ 267 (442)
T PLN02206 190 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPI-GVRSCYDEGKR 267 (442)
T ss_pred eeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCC-CccchHHHHHH
Confidence 9998765444457788999999999999999999986 89999999999876656777764 44 55788999999
Q ss_pred HHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEee
Q psy16545 148 FIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAI 227 (600)
Q Consensus 148 ~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v 227 (600)
++|++++.+.+.+ +++++++||+++|||+.... ...+++.+...+. .++++.++|+|.+.|+|+|++|++
T Consensus 268 ~aE~~~~~y~~~~-g~~~~ilR~~~vyGp~~~~~--------~~~~v~~~i~~~l-~~~~i~i~g~G~~~rdfi~V~Dva 337 (442)
T PLN02206 268 TAETLTMDYHRGA-NVEVRIARIFNTYGPRMCID--------DGRVVSNFVAQAL-RKEPLTVYGDGKQTRSFQFVSDLV 337 (442)
T ss_pred HHHHHHHHHHHHh-CCCeEEEEeccccCCCCCcc--------ccchHHHHHHHHH-cCCCcEEeCCCCEEEeEEeHHHHH
Confidence 9999999987776 89999999999999963210 1345665555554 346788899999999999999999
Q ss_pred eccccc
Q psy16545 228 DNFVNS 233 (600)
Q Consensus 228 ~~~~~a 233 (600)
+++..+
T Consensus 338 ~ai~~a 343 (442)
T PLN02206 338 EGLMRL 343 (442)
T ss_pred HHHHHH
Confidence 876644
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=200.30 Aligned_cols=248 Identities=28% Similarity=0.446 Sum_probs=185.2
Q ss_pred ceeEEEeecCChhhHHHHhhcCCc-cEEEEcccccCcccccc-ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDI-DCVIHFAAVKAVGESMQ-EPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~-d~VihlAa~~~~~~~~~-~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
.+.++.+|+.+.+...+... .. |+|||+|+......... ++..++..|+.++.+++++|++.+++||||+||.++|
T Consensus 43 ~~~~~~~d~~~~~~~~~~~~--~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~ 120 (314)
T COG0451 43 GVEFVVLDLTDRDLVDELAK--GVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVV 120 (314)
T ss_pred ccceeeecccchHHHHHHHh--cCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceE
Confidence 56888999999877777776 44 99999999876544433 4677999999999999999999899999999998888
Q ss_pred cCC-CCCCCCCC-CCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCC
Q psy16545 331 GEP-QFLPITED-HPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKP 407 (600)
Q Consensus 331 g~~-~~~~~~E~-~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~ 407 (600)
+.. ...+++|+ .+..|. ++|+.+| ..+|..++.+...++++++++||.+ +||++......
T Consensus 121 ~~~~~~~~~~E~~~~~~p~-~~Yg~sK---~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~------------- 183 (314)
T COG0451 121 YGDPPPLPIDEDLGPPRPL-NPYGVSK---LAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSS------------- 183 (314)
T ss_pred CCCCCCCCcccccCCCCCC-CHHHHHH---HHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCc-------------
Confidence 765 33478898 677776 4899999 8899999999998899999999876 55544332000
Q ss_pred cceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhh
Q psy16545 408 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLL 487 (600)
Q Consensus 408 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 487 (600)
..+..++..+ ..+.+.... .+++.+.
T Consensus 184 -------------------------------------------~~~~~~~~~~--~~~~~~~~~-----~~~~~~~---- 209 (314)
T COG0451 184 -------------------------------------------GVVSAFIRQL--LKGEPIIVI-----GGDGSQT---- 209 (314)
T ss_pred -------------------------------------------CcHHHHHHHH--HhCCCcceE-----eCCCcee----
Confidence 0011111111 123331111 1344433
Q ss_pred hhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCC-CccHHHHHHHHhhhcCCccc-ccccC-
Q psy16545 488 RTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQ-GTSVLQLLRTFERVTGKPVP-YIVEA- 564 (600)
Q Consensus 488 ~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~-~~s~~e~~~~~~~~~g~~~~-~~~~~- 564 (600)
|+|+| ++|+++++..+++.+... +||++++. ..|++|+++.+.+.+|.+.+ ....+
T Consensus 210 ~~~i~--------------------v~D~a~~~~~~~~~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 268 (314)
T COG0451 210 RDFVY--------------------VDDVADALLLALENPDGG-VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPL 268 (314)
T ss_pred EeeEe--------------------HHHHHHHHHHHHhCCCCc-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCC
Confidence 78888 999999999999887556 99999997 99999999999999998755 34433
Q ss_pred -CCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 565 -RREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 565 -~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
...........|++|+++.|||+|+++++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~ 299 (314)
T COG0451 269 GRRGDLREGKLLDISKARAALGWEPKVSLEE 299 (314)
T ss_pred CCCCcccccccCCHHHHHHHhCCCCCCCHHH
Confidence 233445567889999999999999987754
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=209.80 Aligned_cols=203 Identities=20% Similarity=0.180 Sum_probs=158.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTHDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 67 (600)
.|||++|++|.++.+... ..+.+++.++|+ .+|+++.+++.+ ++...++
T Consensus 8 lItGatG~IG~~l~~~L~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---------~~~~~~~ 76 (349)
T TIGR02622 8 LVTGHTGFKGSWLSLWLL--ELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRK---------AIAEFKP 76 (349)
T ss_pred EEECCCChhHHHHHHHHH--HCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHH---------HHhhcCC
Confidence 589999999999965332 222222222211 678888888888 5554578
Q ss_pred CEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcC-CCeEEEecCccccCCCC-CCCCCCCCCCCCCCChHHHH
Q psy16545 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVYGEPQ-FLPITEDHPTGNIKNVYGKT 145 (600)
Q Consensus 68 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~r~I~~SS~~vyg~~~-~~~~~E~~~~~~p~s~Y~~s 145 (600)
|+|||+||.........++...+++|+.++.+++++|++.+ ++++|++||..+||... ..+++|+.+. .|.++|+.|
T Consensus 77 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~-~p~~~Y~~s 155 (349)
T TIGR02622 77 EIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPL-GGHDPYSSS 155 (349)
T ss_pred CEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCC-CCCCcchhH
Confidence 99999999765555556788899999999999999999876 78999999999998643 2467888888 899999999
Q ss_pred HHHHHHHHHHHHhhc------CCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCccccc
Q psy16545 146 KHFIEEMLKDLSKAH------KEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETED 219 (600)
Q Consensus 146 K~~~e~~~~~~~~~~------~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~ 219 (600)
|.++|.+++.++.++ ++++++++||+++|||+... ...+++.+.+.+. .++++. +++|.+.|+
T Consensus 156 K~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~---------~~~~~~~~~~~~~-~g~~~~-~~~g~~~rd 224 (349)
T TIGR02622 156 KACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWA---------EDRLIPDVIRAFS-SNKIVI-IRNPDATRP 224 (349)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcch---------hhhhhHHHHHHHh-cCCCeE-ECCCCcccc
Confidence 999999999887654 38999999999999996310 1357888888776 456666 478999999
Q ss_pred CcceEEeeeccccc
Q psy16545 220 GTGKVVAIDNFVNS 233 (600)
Q Consensus 220 ~~~v~d~v~~~~~a 233 (600)
|+|++|+++++..+
T Consensus 225 ~i~v~D~a~a~~~~ 238 (349)
T TIGR02622 225 WQHVLEPLSGYLLL 238 (349)
T ss_pred eeeHHHHHHHHHHH
Confidence 99999999876644
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-22 Score=209.31 Aligned_cols=205 Identities=18% Similarity=0.061 Sum_probs=155.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------------cccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------------EGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------------~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
.|||++|++|.++.+.. ...+.+++.+++. .+|++|.+.+.+ +
T Consensus 10 lVTGatGfiG~~l~~~L--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~ 78 (340)
T PLN02653 10 LITGITGQDGSYLTEFL--LSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRR---------W 78 (340)
T ss_pred EEECCCCccHHHHHHHH--HHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHH---------H
Confidence 48999999999996533 2222233322211 579999888888 5
Q ss_pred cccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCC-----eEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY-----QLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 62 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~-----r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
+...++|+||||||.........++...+++|+.|+.+|+++|++.+++ +||++||.++||.... +++|+.+.
T Consensus 79 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~- 156 (340)
T PLN02653 79 LDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPF- 156 (340)
T ss_pred HHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCC-
Confidence 5544689999999987654445667778899999999999999998865 8999999999997654 88999999
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEE-EecCCc
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFT-VFGADY 215 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~g~g~ 215 (600)
.|.++|+.||.++|++++.+++++ ++.++..|+.++|||+.... ....++..+.+.+. .++++. ++|+|.
T Consensus 157 ~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~~~~~~gp~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~g~g~ 227 (340)
T PLN02653 157 HPRSPYAVAKVAAHWYTVNYREAY-GLFACNGILFNHESPRRGEN-------FVTRKITRAVGRIK-VGLQKKLFLGNLD 227 (340)
T ss_pred CCCChhHHHHHHHHHHHHHHHHHc-CCeEEEeeeccccCCCCCcc-------cchhHHHHHHHHHH-cCCCCceEeCCCc
Confidence 899999999999999999998887 88889999999999963211 12234444443333 223333 359999
Q ss_pred ccccCcceEEeeecccccc
Q psy16545 216 ETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 216 ~~~~~~~v~d~v~~~~~a~ 234 (600)
+.|+|+|++|+++++..++
T Consensus 228 ~~rd~i~v~D~a~a~~~~~ 246 (340)
T PLN02653 228 ASRDWGFAGDYVEAMWLML 246 (340)
T ss_pred ceecceeHHHHHHHHHHHH
Confidence 9999999999998877553
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-22 Score=210.04 Aligned_cols=198 Identities=17% Similarity=0.171 Sum_probs=156.2
Q ss_pred CCCCcchHHHHHHHhhhccCC-------------------------CccEEecccccccccChHHhhhHHhhhhcccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGK-------------------------PVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~-------------------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
|||++|++|+++.+.....+. +++++ .+|++|.+++.+ +++
T Consensus 5 ITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~~~~---------~~~ 70 (352)
T PRK10084 5 VTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFE-----HADICDRAELDR---------IFA 70 (352)
T ss_pred EECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEE-----EecCCCHHHHHH---------HHH
Confidence 799999999999653321111 12334 789999998888 665
Q ss_pred cCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc---------CCCeEEEecCccccCCCC---------
Q psy16545 64 THDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH---------GVYQLVFSSSCTVYGEPQ--------- 125 (600)
Q Consensus 64 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---------~~~r~I~~SS~~vyg~~~--------- 125 (600)
..++|+|||+||.........++...+++|+.|+.+++++|++. ++++||++||..+||...
T Consensus 71 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~ 150 (352)
T PRK10084 71 QHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSE 150 (352)
T ss_pred hcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccc
Confidence 45799999999986544445667889999999999999999874 457999999999998531
Q ss_pred C-CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCC
Q psy16545 126 F-LPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGS 204 (600)
Q Consensus 126 ~-~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (600)
. .+++|+.+. .|.+.|+.||.++|++++.+++++ +++++++|+++||||... ...+++.+...+. .
T Consensus 151 ~~~~~~E~~~~-~p~~~Y~~sK~~~E~~~~~~~~~~-g~~~vilr~~~v~Gp~~~----------~~~~~~~~~~~~~-~ 217 (352)
T PRK10084 151 ELPLFTETTAY-APSSPYSASKASSDHLVRAWLRTY-GLPTIVTNCSNNYGPYHF----------PEKLIPLVILNAL-E 217 (352)
T ss_pred cCCCccccCCC-CCCChhHHHHHHHHHHHHHHHHHh-CCCEEEEeccceeCCCcC----------ccchHHHHHHHHh-c
Confidence 1 246888888 899999999999999999998876 999999999999999632 1346776666555 4
Q ss_pred CCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 205 KPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 205 ~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
+.+++++|+|.+.|+++|++|+++.+..+
T Consensus 218 ~~~~~~~~~g~~~~~~v~v~D~a~a~~~~ 246 (352)
T PRK10084 218 GKPLPIYGKGDQIRDWLYVEDHARALYKV 246 (352)
T ss_pred CCCeEEeCCCCeEEeeEEHHHHHHHHHHH
Confidence 45788899999999999999998876644
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.3e-21 Score=214.68 Aligned_cols=150 Identities=21% Similarity=0.160 Sum_probs=110.6
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChH------HhhhHHhhhhcccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMY------ANTDLAQKELGWSA 61 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~------~~~~~~~~~~~~~~ 61 (600)
|||++|++|+++.+.......+.++++++|. .+|+++++ .+.+ +
T Consensus 5 VTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~---------l 75 (657)
T PRK07201 5 VTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAE---------L 75 (657)
T ss_pred EeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHH---------h
Confidence 7999999999996533211234445544442 45776642 2222 2
Q ss_pred cccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCC---CCCCC
Q psy16545 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDH---PTGNI 138 (600)
Q Consensus 62 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~---~~~~p 138 (600)
.++|+||||||..... .......++|+.++.+++++|++.++++||++||..+||... .+.+|+. +. .+
T Consensus 76 ---~~~D~Vih~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~-~~~~e~~~~~~~-~~ 147 (657)
T PRK07201 76 ---GDIDHVVHLAAIYDLT---ADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYE-GVFREDDFDEGQ-GL 147 (657)
T ss_pred ---cCCCEEEECceeecCC---CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCcc-Cccccccchhhc-CC
Confidence 3799999999986532 345668899999999999999999999999999999998643 3445553 23 45
Q ss_pred CChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPS 179 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~ 179 (600)
.++|+.||+.+|+++++. .+++++++||++||||+..
T Consensus 148 ~~~Y~~sK~~~E~~~~~~----~g~~~~ilRp~~v~G~~~~ 184 (657)
T PRK07201 148 PTPYHRTKFEAEKLVREE----CGLPWRVYRPAVVVGDSRT 184 (657)
T ss_pred CCchHHHHHHHHHHHHHc----CCCcEEEEcCCeeeecCCC
Confidence 578999999999998742 3899999999999999754
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.4e-22 Score=203.06 Aligned_cols=206 Identities=18% Similarity=0.176 Sum_probs=144.7
Q ss_pred CCCCcchHHHHHHHhhhccCCCcc-EEecccc----------cccccChHHhhhHHhhhhccccccc---CCCCEEEEcC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVP-YIVEARR----------EGDIVSMYANTDLAQKELGWSARCT---HDIDCVIHFA 74 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~-~~~~~~~----------~~Dl~~~~~~~~~~~~~~~~~~~~~---~~~d~Vih~A 74 (600)
|||++|++|+++.+... ..+.+ ++.+|.. .+|+.|..+...+.+. ++.. .++|+|||+|
T Consensus 4 VtGa~GfiG~~l~~~L~--~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-----~~~~~~~~~~d~Vih~A 76 (308)
T PRK11150 4 VTGGAGFIGSNIVKALN--DKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLAQ-----IMAGDDFGDIEAIFHEG 76 (308)
T ss_pred EecCCcHHHHHHHHHHH--hCCCceEEEecCCCcchHHHhhhhhhhhhhhhHHHHHHH-----HhcccccCCccEEEECc
Confidence 79999999999976433 23332 2222321 2344443322221111 2221 2699999999
Q ss_pred cccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q psy16545 75 AVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLK 154 (600)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~ 154 (600)
|..... ..++...+++|+.++.+|+++|++.++ +||++||.++||.....+++|+.+. .|.++|+.||.++|++++
T Consensus 77 ~~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~-~p~~~Y~~sK~~~E~~~~ 152 (308)
T PRK11150 77 ACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYE-KPLNVYGYSKFLFDEYVR 152 (308)
T ss_pred eecCCc--CCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCC-CCCCHHHHHHHHHHHHHH
Confidence 975432 234556899999999999999999987 7999999999997655578888888 899999999999999999
Q ss_pred HHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEe-cCCcccccCcceEEeeeccccc
Q psy16545 155 DLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVF-GADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 155 ~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-g~g~~~~~~~~v~d~v~~~~~a 233 (600)
.+..+. +++++++||+++|||+... .+....++..+...+. .+....++ |++...|+++|++|+++++..+
T Consensus 153 ~~~~~~-~~~~~~lR~~~vyG~~~~~------~~~~~~~~~~~~~~~~-~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~ 224 (308)
T PRK11150 153 QILPEA-NSQICGFRYFNVYGPREGH------KGSMASVAFHLNNQLN-NGENPKLFEGSENFKRDFVYVGDVAAVNLWF 224 (308)
T ss_pred HHHHHc-CCCEEEEeeeeecCCCCCC------CCccchhHHHHHHHHh-cCCCCEEecCCCceeeeeeeHHHHHHHHHHH
Confidence 988775 8999999999999996432 1112334555544343 23333344 6778899999999998765533
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.5e-22 Score=221.92 Aligned_cols=209 Identities=14% Similarity=0.113 Sum_probs=156.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHH-hhhHHhhhhcccccccCCCCEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYA-NTDLAQKELGWSARCTHDIDCV 70 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~-~~~~~~~~~~~~~~~~~~~d~V 70 (600)
.|||++||+|+++.+..... .+.+++++||. .+|++|... +.+ ++. ++|+|
T Consensus 319 LVTGatGFIGs~Lv~~Ll~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~---------~l~--~~D~V 386 (660)
T PRK08125 319 LILGVNGFIGNHLTERLLRD-DNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEY---------HIK--KCDVV 386 (660)
T ss_pred EEECCCchHHHHHHHHHHhC-CCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHH---------Hhc--CCCEE
Confidence 58999999999996532211 12333333332 567777554 344 555 79999
Q ss_pred EEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCC------CCCCChHHH
Q psy16545 71 IHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPT------GNIKNVYGK 144 (600)
Q Consensus 71 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~------~~p~s~Y~~ 144 (600)
||+||...+.....++...+++|+.++.+++++|++++ ++|||+||.++||.....+++|+++. ..|.++|+.
T Consensus 387 iHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~ 465 (660)
T PRK08125 387 LPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSV 465 (660)
T ss_pred EECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHH
Confidence 99999876554556777899999999999999999998 79999999999997655678888642 124578999
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceE
Q psy16545 145 TKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKV 224 (600)
Q Consensus 145 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~ 224 (600)
||.++|++++.+++.+ +++++++||+++|||+........ .+ ...+++.+...+. .++++.++|+|.+.|+|+|++
T Consensus 466 sK~~~E~~~~~~~~~~-g~~~~ilR~~~vyGp~~~~~~~~~-~~-~~~~i~~~i~~~~-~~~~i~~~g~g~~~rd~i~v~ 541 (660)
T PRK08125 466 SKQLLDRVIWAYGEKE-GLRFTLFRPFNWMGPRLDNLNAAR-IG-SSRAITQLILNLV-EGSPIKLVDGGKQKRCFTDIR 541 (660)
T ss_pred HHHHHHHHHHHHHHhc-CCceEEEEEceeeCCCcccccccc-cc-ccchHHHHHHHhc-CCCCeEEeCCCceeeceeeHH
Confidence 9999999999998776 999999999999999754211000 00 1346666666555 456788899999999999999
Q ss_pred Eeeeccccc
Q psy16545 225 VAIDNFVNS 233 (600)
Q Consensus 225 d~v~~~~~a 233 (600)
|+++.+..+
T Consensus 542 Dva~a~~~~ 550 (660)
T PRK08125 542 DGIEALFRI 550 (660)
T ss_pred HHHHHHHHH
Confidence 999877655
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-21 Score=200.16 Aligned_cols=203 Identities=19% Similarity=0.203 Sum_probs=157.8
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccc---------------------ccccccChHHhhhHHhhhhcccccccCCC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEAR---------------------REGDIVSMYANTDLAQKELGWSARCTHDI 67 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~---------------------~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 67 (600)
|||++|++|+.+.+.....+...+++++++ -.+|+.|++++.+ +++..++
T Consensus 4 ItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---------~~~~~~~ 74 (317)
T TIGR01181 4 VTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSR---------LFTEHQP 74 (317)
T ss_pred EEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHH---------HHhhcCC
Confidence 799999999999663322221233343332 1478999988888 6654459
Q ss_pred CEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCC-eEEEecCccccCCCCCC-CCCCCCCCCCCCChHHHH
Q psy16545 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY-QLVFSSSCTVYGEPQFL-PITEDHPTGNIKNVYGKT 145 (600)
Q Consensus 68 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~-r~I~~SS~~vyg~~~~~-~~~E~~~~~~p~s~Y~~s 145 (600)
|+|||+|+.........++...+++|+.++.+++++|++.+.+ ++|++||..+||..... +++|+.+. .|.+.|+.+
T Consensus 75 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~-~~~~~Y~~s 153 (317)
T TIGR01181 75 DAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPL-APSSPYSAS 153 (317)
T ss_pred CEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCC-CCCCchHHH
Confidence 9999999987554445667788999999999999999987543 89999999999865433 68899888 889999999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEE
Q psy16545 146 KHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVV 225 (600)
Q Consensus 146 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d 225 (600)
|..+|.+++.++.+. +++++++||+++|||.... ..+++.+...+. .+++++++++|.+.++++|++|
T Consensus 154 K~~~e~~~~~~~~~~-~~~~~i~R~~~i~G~~~~~----------~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~v~D 221 (317)
T TIGR01181 154 KAASDHLVRAYHRTY-GLPALITRCSNNYGPYQFP----------EKLIPLMITNAL-AGKPLPVYGDGQQVRDWLYVED 221 (317)
T ss_pred HHHHHHHHHHHHHHh-CCCeEEEEeccccCCCCCc----------ccHHHHHHHHHh-cCCCceEeCCCceEEeeEEHHH
Confidence 999999999988776 9999999999999996321 346776655554 4457888999999999999999
Q ss_pred eeeccccc
Q psy16545 226 AIDNFVNS 233 (600)
Q Consensus 226 ~v~~~~~a 233 (600)
+++.+...
T Consensus 222 ~a~~~~~~ 229 (317)
T TIGR01181 222 HCRAIYLV 229 (317)
T ss_pred HHHHHHHH
Confidence 88765544
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.3e-21 Score=197.68 Aligned_cols=238 Identities=18% Similarity=0.236 Sum_probs=167.5
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChH-HHHHHHHHHHHHHHHHHHHc-CCCEEEEecCccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPL-MYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTV 329 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~-~~~~~Nv~gt~~ll~~~~~~-~~~r~v~~SS~~v 329 (600)
..++++.+|+.+...+.++++ ++|+|||+|+.... ...++. ..++.|+.++.+++++|++. +++||||+||.++
T Consensus 56 ~~~~~~~~Dl~~~~~~~~~~~--~~d~vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~ 131 (322)
T PLN02986 56 ERLKLFKADLLEESSFEQAIE--GCDAVFHTASPVFF--TVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAA 131 (322)
T ss_pred CceEEEecCCCCcchHHHHHh--CCCEEEEeCCCcCC--CCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhh
Confidence 468899999999999999998 79999999997432 223443 56899999999999999986 7899999999876
Q ss_pred c--cCC---CCCCCCCCCCCCC-----CCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHH
Q psy16545 330 Y--GEP---QFLPITEDHPTGN-----IKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRT 398 (600)
Q Consensus 330 Y--g~~---~~~~~~E~~~~~~-----~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~ 398 (600)
| +.. ...+++|+.+..| ..+.|+.|| ..+|.+++.|.+.++++++++||++ +||+.....
T Consensus 132 ~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK---~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~------ 202 (322)
T PLN02986 132 VLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSK---ILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTL------ 202 (322)
T ss_pred eecCCccCCCCCCcCcccCCChHHhhccccchHHHH---HHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCC------
Confidence 4 432 2335778765432 237899999 8899999999998999999999887 444211100
Q ss_pred HHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCC
Q psy16545 399 FERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTG 478 (600)
Q Consensus 399 ~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 478 (600)
.. ...++..+ ..++++ . +
T Consensus 203 ---------------------~~-------------------------------~~~~~~~~--~~g~~~-~-------~ 220 (322)
T PLN02986 203 ---------------------NF-------------------------------SVELIVDF--INGKNL-F-------N 220 (322)
T ss_pred ---------------------Cc-------------------------------cHHHHHHH--HcCCCC-C-------C
Confidence 00 00111111 113221 0 2
Q ss_pred CcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcc
Q psy16545 479 QGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV 558 (600)
Q Consensus 479 ~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~ 558 (600)
.+. ++|+| |+|+++++..++..+..+++||++ ++.+|++|+++++.+.++. .
T Consensus 221 ~~~------~~~v~--------------------v~Dva~a~~~al~~~~~~~~yni~-~~~~s~~e~~~~i~~~~~~-~ 272 (322)
T PLN02986 221 NRF------YRFVD--------------------VRDVALAHIKALETPSANGRYIID-GPIMSVNDIIDILRELFPD-L 272 (322)
T ss_pred CcC------cceeE--------------------HHHHHHHHHHHhcCcccCCcEEEe-cCCCCHHHHHHHHHHHCCC-C
Confidence 222 78888 999999999998876555699995 6689999999999999973 2
Q ss_pred cccccCCCCCCcccc--ccChHHHHHHcCceeeEEEEec
Q psy16545 559 PYIVEARREGDIVSM--YANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 559 ~~~~~~~~~~~~~~~--~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
.+... .+..+.... .+|++|+++ |||+|+ +||.+
T Consensus 273 ~~~~~-~~~~~~~~~~~~~d~~~~~~-lg~~~~-~l~e~ 308 (322)
T PLN02986 273 CIADT-NEESEMNEMICKVCVEKVKN-LGVEFT-PMKSS 308 (322)
T ss_pred CCCCC-CccccccccCCccCHHHHHH-cCCccc-CHHHH
Confidence 22211 122222222 489999976 999997 88754
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=194.29 Aligned_cols=224 Identities=17% Similarity=0.184 Sum_probs=169.2
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.|.+.+.++++ ++|+|||+|+.........++...+++|+.++.+++++|++.++++||++||...
T Consensus 53 ~~~~~v~~Dl~d~~~l~~~~~--~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~-- 128 (324)
T TIGR03589 53 PCLRFFIGDVRDKERLTRALR--GVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA-- 128 (324)
T ss_pred CcEEEEEccCCCHHHHHHHHh--cCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC--
Confidence 468899999999999999987 7899999999765544566788899999999999999999999999999999532
Q ss_pred CCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHH---HHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCC
Q psy16545 332 EPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFE---RVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKP 407 (600)
Q Consensus 332 ~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~---~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~ 407 (600)
..| .++|+.+| ..+|.+++.+. ..++++++++||++ +|+++. ++..
T Consensus 129 ------------~~p-~~~Y~~sK---~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-----~i~~--------- 178 (324)
T TIGR03589 129 ------------ANP-INLYGATK---LASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-----VVPF--------- 178 (324)
T ss_pred ------------CCC-CCHHHHHH---HHHHHHHHHHHhhccccCcEEEEEeecceeCCCCC-----cHHH---------
Confidence 123 37899999 77899887754 35789999999987 544321 1111
Q ss_pred cceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCC-CCceeeccCCCCCcccchhh
Q psy16545 408 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK-PVPYIFYNLGTGQGTSVLQL 486 (600)
Q Consensus 408 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~ 486 (600)
+...+. .+. ++++ +++.+.
T Consensus 179 ------------------------------------------------~~~~~~--~~~~~~~i-------~~~~~~--- 198 (324)
T TIGR03589 179 ------------------------------------------------FKSLKE--EGVTELPI-------TDPRMT--- 198 (324)
T ss_pred ------------------------------------------------HHHHHH--hCCCCeee-------CCCCce---
Confidence 111111 132 3443 223333
Q ss_pred hhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCC
Q psy16545 487 LRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARR 566 (600)
Q Consensus 487 ~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~ 566 (600)
|+|+| ++|+++++..+++....+++| ++++..+|+.|+++.+.+..+ +...+.+
T Consensus 199 -r~~i~--------------------v~D~a~a~~~al~~~~~~~~~-~~~~~~~sv~el~~~i~~~~~----~~~~~~~ 252 (324)
T TIGR03589 199 -RFWIT--------------------LEQGVNFVLKSLERMLGGEIF-VPKIPSMKITDLAEAMAPECP----HKIVGIR 252 (324)
T ss_pred -EeeEE--------------------HHHHHHHHHHHHhhCCCCCEE-ccCCCcEEHHHHHHHHHhhCC----eeEeCCC
Confidence 88988 889999999888765446788 477788999999999998653 3345556
Q ss_pred CCCc-cccccChHHHHHHcCceeeEEEEec
Q psy16545 567 EGDI-VSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 567 ~~~~-~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
+++. +...+|++|+++.|||+|+++++.+
T Consensus 253 ~g~~~~~~~~~~~~~~~~lg~~~~~~l~~~ 282 (324)
T TIGR03589 253 PGEKLHEVMITEDDARHTYELGDYYAILPS 282 (324)
T ss_pred CCchhHhhhcChhhhhhhcCCCCeEEEccc
Confidence 6664 4467899999999999999999876
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-21 Score=196.81 Aligned_cols=194 Identities=20% Similarity=0.147 Sum_probs=156.9
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCChhh
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLM 88 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~ 88 (600)
|||++|++|+++.+ ++...+.++++++|..+|+.+.+.+.+ ++...++|+|||||+..........+..
T Consensus 4 v~G~tG~iG~~l~~--~l~~~g~~v~~~~r~~~d~~~~~~~~~---------~~~~~~~d~vi~~a~~~~~~~~~~~~~~ 72 (287)
T TIGR01214 4 ITGANGQLGRELVQ--QLSPEGRVVVALTSSQLDLTDPEALER---------LLRAIRPDAVVNTAAYTDVDGAESDPEK 72 (287)
T ss_pred EEcCCCHHHHHHHH--HHHhcCCEEEEeCCcccCCCCHHHHHH---------HHHhCCCCEEEECCccccccccccCHHH
Confidence 79999999999965 444456678888999999999999988 6664568999999998654444456677
Q ss_pred hHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEE
Q psy16545 89 YYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISL 168 (600)
Q Consensus 89 ~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~il 168 (600)
.+++|+.++.+++++|++.+. +||++||.++|+.....+++|+++. .|.++|+.+|..+|++++.+ +.+++++
T Consensus 73 ~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~-~~~~~Y~~~K~~~E~~~~~~-----~~~~~il 145 (287)
T TIGR01214 73 AFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDAT-NPLNVYGQSKLAGEQAIRAA-----GPNALIV 145 (287)
T ss_pred HHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCC-CCcchhhHHHHHHHHHHHHh-----CCCeEEE
Confidence 899999999999999999886 8999999999987666789999998 88999999999999999775 5689999
Q ss_pred ecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeecccccc
Q psy16545 169 RYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 169 R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a~ 234 (600)
||+++|||+.. ..+++.+.+.+. .++++.+.++ +.++++|++|+++.+..++
T Consensus 146 R~~~v~G~~~~-----------~~~~~~~~~~~~-~~~~~~~~~~--~~~~~v~v~Dva~a~~~~~ 197 (287)
T TIGR01214 146 RTSWLYGGGGG-----------RNFVRTMLRLAG-RGEELRVVDD--QIGSPTYAKDLARVIAALL 197 (287)
T ss_pred EeeecccCCCC-----------CCHHHHHHHHhh-cCCCceEecC--CCcCCcCHHHHHHHHHHHH
Confidence 99999999631 235555565555 3456777665 6789999999888766553
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-20 Score=182.32 Aligned_cols=228 Identities=18% Similarity=0.150 Sum_probs=178.6
Q ss_pred eecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCCCCC
Q psy16545 259 CDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPI 338 (600)
Q Consensus 259 ~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~~~ 338 (600)
.|++|++.+.+++++.+||+|||+||.+.++.++.++...+.+|..++.++.++|.+.|. ++||+||..||.+....|.
T Consensus 34 ~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y 112 (281)
T COG1091 34 LDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPY 112 (281)
T ss_pred ccccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCC
Confidence 699999999999999999999999999999999999999999999999999999999996 9999999999999888899
Q ss_pred CCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCCCCcceEEeeCCCC
Q psy16545 339 TEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTG 418 (600)
Q Consensus 339 ~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~ 418 (600)
.|+++.+|. +.||.|| +.+|..++.+. -+.+++|.+-++...+.++
T Consensus 113 ~E~D~~~P~-nvYG~sK---l~GE~~v~~~~----~~~~I~Rtswv~g~~g~nF-------------------------- 158 (281)
T COG1091 113 KETDTPNPL-NVYGRSK---LAGEEAVRAAG----PRHLILRTSWVYGEYGNNF-------------------------- 158 (281)
T ss_pred CCCCCCCCh-hhhhHHH---HHHHHHHHHhC----CCEEEEEeeeeecCCCCCH--------------------------
Confidence 999999997 8999999 88999998764 5678999765322222222
Q ss_pred CcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhhhcCCCc
Q psy16545 419 QGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV 498 (600)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~~~ 498 (600)
+..|++... .++++.++ .|+..+.++
T Consensus 159 ----------------------------------v~tml~la~--~~~~l~vv------------~Dq~gsPt~------ 184 (281)
T COG1091 159 ----------------------------------VKTMLRLAK--EGKELKVV------------DDQYGSPTY------ 184 (281)
T ss_pred ----------------------------------HHHHHHHhh--cCCceEEE------------CCeeeCCcc------
Confidence 111222221 14444432 222233444
Q ss_pred cccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccccc---cc---CCCCCCccc
Q psy16545 499 PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYI---VE---ARREGDIVS 572 (600)
Q Consensus 499 ~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~---~~---~~~~~~~~~ 572 (600)
..|+++++..++.....+++|++.+...+|+-|+++.+.+.++.+..+. .. |....++.+
T Consensus 185 --------------~~dlA~~i~~ll~~~~~~~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~ 250 (281)
T COG1091 185 --------------TEDLADAILELLEKEKEGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPAN 250 (281)
T ss_pred --------------HHHHHHHHHHHHhccccCcEEEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCcc
Confidence 8899999999888776667999999888999999999999998543221 11 223445667
Q ss_pred cccChHHHHHHcCceee
Q psy16545 573 MYANTDLAQRELGWSAR 589 (600)
Q Consensus 573 ~~~d~~k~~~~lG~~p~ 589 (600)
..+|++|+++.+|+.|+
T Consensus 251 S~L~~~k~~~~~g~~~~ 267 (281)
T COG1091 251 SSLDTKKLEKAFGLSLP 267 (281)
T ss_pred cccchHHHHHHhCCCCc
Confidence 88999999999998754
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.4e-21 Score=190.86 Aligned_cols=211 Identities=22% Similarity=0.255 Sum_probs=149.0
Q ss_pred eEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCC-
Q psy16545 255 DFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP- 333 (600)
Q Consensus 255 ~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~- 333 (600)
+++.+|+++++.+.++++ ++|+|||+|+...... ......+++.|+.||.|++++|++++++||||+||.+|++..
T Consensus 48 ~~~~~Di~d~~~l~~a~~--g~d~V~H~Aa~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~ 124 (280)
T PF01073_consen 48 EYIQGDITDPESLEEALE--GVDVVFHTAAPVPPWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNY 124 (280)
T ss_pred eEEEeccccHHHHHHHhc--CCceEEEeCccccccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEecc
Confidence 499999999999999999 8999999999764322 345677999999999999999999999999999999999862
Q ss_pred CCCC---CCCCCCCCC-CCcccccchhhHHHHHHHHHHHHH---H--hCCCCeeEeecc-cCCCCcchHHHHHHHHHHHh
Q psy16545 334 QFLP---ITEDHPTGN-IKNFYNLGTGQGTSVLQLLRTFER---V--TGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVT 403 (600)
Q Consensus 334 ~~~~---~~E~~~~~~-~~~~Y~~sK~~~~~~E~~~~~~~~---~--~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~ 403 (600)
...+ .+|+.|..+ ..++|+.|| ..+|++++.... + ..++.+++||.. |||++......+...
T Consensus 125 ~~~~~~~~dE~~~~~~~~~~~Y~~SK---~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~----- 196 (280)
T PF01073_consen 125 KGDPIINGDEDTPYPSSPLDPYAESK---ALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKM----- 196 (280)
T ss_pred CCCCcccCCcCCcccccccCchHHHH---HHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHH-----
Confidence 1222 467766543 457899999 889999999876 2 248889999876 555443322111111
Q ss_pred CCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccc
Q psy16545 404 GNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSV 483 (600)
Q Consensus 404 g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 483 (600)
+. .+..... .|.+...
T Consensus 197 --------------------------------------------------------~~--~g~~~~~------~g~~~~~ 212 (280)
T PF01073_consen 197 --------------------------------------------------------VR--SGLFLFQ------IGDGNNL 212 (280)
T ss_pred --------------------------------------------------------HH--hccccee------ecCCCce
Confidence 10 0111111 1333323
Q ss_pred hhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCC----CCceeEeEcCCCCCcc-HHHHHHHHhhhcCCcc
Q psy16545 484 LQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK----PVPYIFYNLGTGQGTS-VLQLLRTFERVTGKPV 558 (600)
Q Consensus 484 ~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~----~~~~~~~nl~~~~~~s-~~e~~~~~~~~~g~~~ 558 (600)
.+|+||+ |++++| +.|...+... ...|+.|+|..++++. ..|+...+.+.+|.+.
T Consensus 213 ----~~~vyV~---------NvA~ah-------vlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~ 272 (280)
T PF01073_consen 213 ----FDFVYVE---------NVAHAH-------VLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPP 272 (280)
T ss_pred ----ECcEeHH---------HHHHHH-------HHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCC
Confidence 7888855 444444 2222222222 2469999999999999 9999999999999875
Q ss_pred cc
Q psy16545 559 PY 560 (600)
Q Consensus 559 ~~ 560 (600)
+.
T Consensus 273 ~~ 274 (280)
T PF01073_consen 273 PK 274 (280)
T ss_pred Cc
Confidence 54
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-20 Score=192.65 Aligned_cols=239 Identities=21% Similarity=0.215 Sum_probs=175.4
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 332 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~ 332 (600)
+++++.+|+.+.+++.++++ ++|+|||+|+... ....++...++.|+.++.+++++|++.++++||++||.++||.
T Consensus 44 ~~~~~~~D~~~~~~l~~~~~--~~d~vi~~a~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~ 119 (328)
T TIGR03466 44 DVEIVEGDLRDPASLRKAVA--GCRALFHVAADYR--LWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGV 119 (328)
T ss_pred CceEEEeeCCCHHHHHHHHh--CCCEEEEeceecc--cCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCc
Confidence 57899999999999999988 7899999998642 2335678889999999999999999999999999999999995
Q ss_pred -CCCCCCCCCCCCCCC--CcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCc
Q psy16545 333 -PQFLPITEDHPTGNI--KNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPV 408 (600)
Q Consensus 333 -~~~~~~~E~~~~~~~--~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~ 408 (600)
....+.+|+.+..+. .+.|+.+| ...|.+++.+...++++++++||++ +|++.....
T Consensus 120 ~~~~~~~~e~~~~~~~~~~~~Y~~sK---~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~---------------- 180 (328)
T TIGR03466 120 RGDGTPADETTPSSLDDMIGHYKRSK---FLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPT---------------- 180 (328)
T ss_pred CCCCCCcCccCCCCcccccChHHHHH---HHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCC----------------
Confidence 345678898876552 35899999 7899999999888899999999887 444322100
Q ss_pred ceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhh
Q psy16545 409 PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLR 488 (600)
Q Consensus 409 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 488 (600)
. ...++ ........+.. .+.. +
T Consensus 181 -------------~------------------------------~~~~~---~~~~~~~~~~~------~~~~------~ 202 (328)
T TIGR03466 181 -------------P------------------------------TGRII---VDFLNGKMPAY------VDTG------L 202 (328)
T ss_pred -------------c------------------------------HHHHH---HHHHcCCCcee------eCCC------c
Confidence 0 00000 01111122211 1111 5
Q ss_pred hhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCC--
Q psy16545 489 TFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-- 566 (600)
Q Consensus 489 ~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~-- 566 (600)
+|+| ++|+++++..++.....++.||++ ++.+|++|+++.+.+.+|.+.+....|..
T Consensus 203 ~~i~--------------------v~D~a~a~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 261 (328)
T TIGR03466 203 NLVH--------------------VDDVAEGHLLALERGRIGERYILG-GENLTLKQILDKLAEITGRPAPRVKLPRWLL 261 (328)
T ss_pred ceEE--------------------HHHHHHHHHHHHhCCCCCceEEec-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHH
Confidence 6777 889999988888776567889986 68999999999999999976544333311
Q ss_pred --------------CCCc-----------cccccChHHHHHHcCceeeEEEEe
Q psy16545 567 --------------EGDI-----------VSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 567 --------------~~~~-----------~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
...+ ....+|++|++++|||+|+ +++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~-~~~~ 313 (328)
T TIGR03466 262 LPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGYRQR-PARE 313 (328)
T ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcCCCCc-CHHH
Confidence 0011 2456899999999999995 8753
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.9e-21 Score=193.56 Aligned_cols=228 Identities=21% Similarity=0.232 Sum_probs=151.3
Q ss_pred EeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCCCC
Q psy16545 258 SCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLP 337 (600)
Q Consensus 258 ~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~~ 337 (600)
..|+.+.+.+.+.+...++|+|||+|+...+..+..+|...++.|+.++.+|+++|.+.+. ++||+||..||++....|
T Consensus 34 ~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~ 112 (286)
T PF04321_consen 34 DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGP 112 (286)
T ss_dssp CS-TTSHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSS
T ss_pred hcCCCCHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccc
Confidence 5789999999999998889999999999988899999999999999999999999999986 999999999999888888
Q ss_pred CCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEEeeCC
Q psy16545 338 ITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLG 416 (600)
Q Consensus 338 ~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g 416 (600)
.+|+++..|. +.||.+| ..+|+.++.... +.+++|++. +|+.. .++
T Consensus 113 y~E~d~~~P~-~~YG~~K---~~~E~~v~~~~~----~~~IlR~~~~~g~~~-~~~------------------------ 159 (286)
T PF04321_consen 113 YTEDDPPNPL-NVYGRSK---LEGEQAVRAACP----NALILRTSWVYGPSG-RNF------------------------ 159 (286)
T ss_dssp B-TTS----S-SHHHHHH---HHHHHHHHHH-S----SEEEEEE-SEESSSS-SSH------------------------
T ss_pred cccCCCCCCC-CHHHHHH---HHHHHHHHHhcC----CEEEEecceecccCC-Cch------------------------
Confidence 9999999886 9999999 889999987433 789999876 54422 221
Q ss_pred CCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhhhcCC
Q psy16545 417 TGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK 496 (600)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~ 496 (600)
+..+++.+ ..++++.+. .+. .++.+|
T Consensus 160 ------------------------------------~~~~~~~~--~~~~~i~~~------~d~------~~~p~~---- 185 (286)
T PF04321_consen 160 ------------------------------------LRWLLRRL--RQGEPIKLF------DDQ------YRSPTY---- 185 (286)
T ss_dssp ------------------------------------HHHHHHHH--HCTSEEEEE------SSC------EE--EE----
T ss_pred ------------------------------------hhhHHHHH--hcCCeeEee------CCc------eeCCEE----
Confidence 11122222 124444431 111 255555
Q ss_pred CccccccCCCCCcchhHHHHHHHhhhhcCCCCc----eeEeEcCCCCCccHHHHHHHHhhhcCCcc-ccccc-----CCC
Q psy16545 497 PVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP----YIFYNLGTGQGTSVLQLLRTFERVTGKPV-PYIVE-----ARR 566 (600)
Q Consensus 497 ~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~----~~~~nl~~~~~~s~~e~~~~~~~~~g~~~-~~~~~-----~~~ 566 (600)
+.|+++++..++++... .++||+++++.+|..|+++.+.+.+|.+. .+... +..
T Consensus 186 ----------------~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~ 249 (286)
T PF04321_consen 186 ----------------VDDLARVILELIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRA 249 (286)
T ss_dssp ----------------HHHHHHHHHHHHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTS
T ss_pred ----------------HHHHHHHHHHHHHhcccccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCC
Confidence 88999999988876532 68999999999999999999999999754 22222 122
Q ss_pred CCCccccccChHHHHHHcCceee
Q psy16545 567 EGDIVSMYANTDLAQRELGWSAR 589 (600)
Q Consensus 567 ~~~~~~~~~d~~k~~~~lG~~p~ 589 (600)
...+.+..+|++|+++.||++|.
T Consensus 250 ~~rp~~~~L~~~kl~~~~g~~~~ 272 (286)
T PF04321_consen 250 APRPRNTSLDCRKLKNLLGIKPP 272 (286)
T ss_dssp SGS-SBE-B--HHHHHCTTS---
T ss_pred CCCCCcccccHHHHHHccCCCCc
Confidence 33566789999999999999863
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.8e-21 Score=197.44 Aligned_cols=192 Identities=18% Similarity=0.113 Sum_probs=143.8
Q ss_pred cCCCCcchHHHHHHHhhhccCC-------------------------CccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGK-------------------------PVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~-------------------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
.|||++|++|+++.+.....+. +++++ .+|+++.+++.+ ++
T Consensus 14 lVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~~~~---------~~ 79 (342)
T PLN02214 14 CVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILC-----KADLQDYEALKA---------AI 79 (342)
T ss_pred EEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEE-----ecCcCChHHHHH---------HH
Confidence 5899999999999553221111 23344 678888888877 66
Q ss_pred ccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCc-cccCCCCC---CCCCCCC-----
Q psy16545 63 CTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSC-TVYGEPQF---LPITEDH----- 133 (600)
Q Consensus 63 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~-~vyg~~~~---~~~~E~~----- 133 (600)
. ++|+|||+|+.. ..++...+++|+.|+.+++++|++.+++|||++||. ++||.... .+++|++
T Consensus 80 ~--~~d~Vih~A~~~-----~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~ 152 (342)
T PLN02214 80 D--GCDGVFHTASPV-----TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLD 152 (342)
T ss_pred h--cCCEEEEecCCC-----CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChh
Confidence 6 799999999975 245678899999999999999999999999999996 58875332 2478875
Q ss_pred -CCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEec
Q psy16545 134 -PTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG 212 (600)
Q Consensus 134 -~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g 212 (600)
+. .|.++|+.||.++|++++.+.+++ +++++++||++||||+..+.. ...+..+.+.+.+.. . .++
T Consensus 153 ~~~-~p~~~Y~~sK~~aE~~~~~~~~~~-g~~~v~lRp~~vyGp~~~~~~--------~~~~~~~~~~~~g~~--~-~~~ 219 (342)
T PLN02214 153 FCK-NTKNWYCYGKMVAEQAAWETAKEK-GVDLVVLNPVLVLGPPLQPTI--------NASLYHVLKYLTGSA--K-TYA 219 (342)
T ss_pred hcc-ccccHHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCceECCCCCCCC--------CchHHHHHHHHcCCc--c-cCC
Confidence 33 467899999999999999998876 999999999999999743211 122334445454432 2 234
Q ss_pred CCcccccCcceEEeeeccccccc
Q psy16545 213 ADYETEDGTGKVVAIDNFVNSVH 235 (600)
Q Consensus 213 ~g~~~~~~~~v~d~v~~~~~a~~ 235 (600)
.+.|+|+|++|+++++..++.
T Consensus 220 --~~~~~~i~V~Dva~a~~~al~ 240 (342)
T PLN02214 220 --NLTQAYVDVRDVALAHVLVYE 240 (342)
T ss_pred --CCCcCeeEHHHHHHHHHHHHh
Confidence 467999999999998877644
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.3e-21 Score=194.70 Aligned_cols=204 Identities=25% Similarity=0.287 Sum_probs=151.9
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc--------------cccccChHHhhhHHhhhhcccccccCCC-CEEEEc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------EGDIVSMYANTDLAQKELGWSARCTHDI-DCVIHF 73 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~-d~Vih~ 73 (600)
|||++|++|.++.+ +|...+.+++++++. .+|+++.+...+ ... .. |+|||+
T Consensus 5 VtG~tGfiG~~l~~--~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~---------~~~--~~~d~vih~ 71 (314)
T COG0451 5 VTGGAGFIGSHLVE--RLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDE---------LAK--GVPDAVIHL 71 (314)
T ss_pred EEcCcccHHHHHHH--HHHhCCCeEEEEeCCCccccccccccceeeecccchHHHHH---------HHh--cCCCEEEEc
Confidence 79999999999965 333334445544542 467777655555 444 34 999999
Q ss_pred CcccCcccCCC-ChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCC-CCCCCCCC-CCCCCCCChHHHHHHHHH
Q psy16545 74 AAVKAVGESMQ-EPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP-QFLPITED-HPTGNIKNVYGKTKHFIE 150 (600)
Q Consensus 74 A~~~~~~~~~~-~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~-~~~~~~E~-~~~~~p~s~Y~~sK~~~e 150 (600)
|+......... ++...+++|+.++.+++++|++.++++||+.||.++|+.. ...+++|+ .+. .|.++|+.||+++|
T Consensus 72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~-~p~~~Yg~sK~~~E 150 (314)
T COG0451 72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPP-RPLNPYGVSKLAAE 150 (314)
T ss_pred cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCC-CCCCHHHHHHHHHH
Confidence 99986543333 4566999999999999999999999999998888877754 33478888 677 78889999999999
Q ss_pred HHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHH-HHHhhcCCCCeEEEecCCcccccCcceEEeeec
Q psy16545 151 EMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPY-LAQVAIGSKPHFTVFGADYETEDGTGKVVAIDN 229 (600)
Q Consensus 151 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~ 229 (600)
+.++.+.... +++++++||++||||+..+.+ .+.+... +.+...+ .+.+.+.++|.+.|+++|++|+++.
T Consensus 151 ~~~~~~~~~~-~~~~~ilR~~~vyGp~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~ 221 (314)
T COG0451 151 QLLRAYARLY-GLPVVILRPFNVYGPGDKPDL-------SSGVVSAFIRQLLKG-EPIIVIGGDGSQTRDFVYVDDVADA 221 (314)
T ss_pred HHHHHHHHHh-CCCeEEEeeeeeeCCCCCCCC-------CcCcHHHHHHHHHhC-CCcceEeCCCceeEeeEeHHHHHHH
Confidence 9999998854 899999999999999866432 1224444 3333332 2236677899999999999998876
Q ss_pred cccccc
Q psy16545 230 FVNSVH 235 (600)
Q Consensus 230 ~~~a~~ 235 (600)
+..+++
T Consensus 222 ~~~~~~ 227 (314)
T COG0451 222 LLLALE 227 (314)
T ss_pred HHHHHh
Confidence 665543
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.7e-21 Score=197.15 Aligned_cols=197 Identities=14% Similarity=0.108 Sum_probs=141.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCC-------------------------ccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKP-------------------------VPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~-------------------------~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
.|||++|++|+++.+.....+.. ++++ .+|++|.+.+.+ ++
T Consensus 13 lItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~~~~---------~~ 78 (338)
T PLN00198 13 CVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIF-----GADLTDEESFEA---------PI 78 (338)
T ss_pred EEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEE-----EcCCCChHHHHH---------HH
Confidence 58999999999996532211111 2333 678888888777 66
Q ss_pred ccCCCCEEEEcCcccCcccCCCCh-hhhHHhHHHHHHHHHHHHHHc-CCCeEEEecCccccCCCC----CCCCCCCC---
Q psy16545 63 CTHDIDCVIHFAAVKAVGESMQEP-LMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTVYGEPQ----FLPITEDH--- 133 (600)
Q Consensus 63 ~~~~~d~Vih~A~~~~~~~~~~~~-~~~~~~Nv~gt~~ll~a~~~~-~~~r~I~~SS~~vyg~~~----~~~~~E~~--- 133 (600)
. ++|+|||+||.... ...++ ..++++|+.++.+|+++|.+. ++++||++||.++||... ..+++|+.
T Consensus 79 ~--~~d~vih~A~~~~~--~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~ 154 (338)
T PLN00198 79 A--GCDLVFHVATPVNF--ASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTD 154 (338)
T ss_pred h--cCCEEEEeCCCCcc--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCc
Confidence 5 78999999996532 12233 346799999999999999886 588999999999998431 23456652
Q ss_pred ------CCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCe
Q psy16545 134 ------PTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPH 207 (600)
Q Consensus 134 ------~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (600)
+. .|.++|+.||.++|++++.+++++ +++++++||++||||+..+.. ..++..+.+.+. +++
T Consensus 155 ~~~~~~~~-~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~R~~~vyGp~~~~~~--------~~~~~~~~~~~~--~~~ 222 (338)
T PLN00198 155 VEFLTSEK-PPTWGYPASKTLAEKAAWKFAEEN-NIDLITVIPTLMAGPSLTSDI--------PSSLSLAMSLIT--GNE 222 (338)
T ss_pred hhhhhhcC-CccchhHHHHHHHHHHHHHHHHhc-CceEEEEeCCceECCCccCCC--------CCcHHHHHHHHc--CCc
Confidence 33 577899999999999999998876 999999999999999753211 223444444443 345
Q ss_pred EEEec-CCcc----cccCcceEEeeecccccc
Q psy16545 208 FTVFG-ADYE----TEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 208 ~~v~g-~g~~----~~~~~~v~d~v~~~~~a~ 234 (600)
+.+.| +|.+ .|+|+|++|+++++..++
T Consensus 223 ~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~ 254 (338)
T PLN00198 223 FLINGLKGMQMLSGSISITHVEDVCRAHIFLA 254 (338)
T ss_pred cccccccccccccCCcceeEHHHHHHHHHHHh
Confidence 55555 3443 379999999998777654
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.9e-20 Score=193.96 Aligned_cols=205 Identities=17% Similarity=0.111 Sum_probs=139.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTHDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 67 (600)
.|||++|++|+++.+... ..+.++++++++ .+|+.+.+.+.+ ++. ++
T Consensus 14 LVtG~~GfIG~~l~~~L~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---------~~~--~~ 80 (353)
T PLN02896 14 CVTGATGYIGSWLVKLLL--QRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDE---------AVK--GC 80 (353)
T ss_pred EEECCCcHHHHHHHHHHH--HCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHH---------HHc--CC
Confidence 489999999999965322 222222222211 678888888877 665 68
Q ss_pred CEEEEcCcccCccc--CCCChhhh-----HHhHHHHHHHHHHHHHHcC-CCeEEEecCccccCCCC-----CCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVGE--SMQEPLMY-----YKNNLIATINLLEVMKSHG-VYQLVFSSSCTVYGEPQ-----FLPITEDHP 134 (600)
Q Consensus 68 d~Vih~A~~~~~~~--~~~~~~~~-----~~~Nv~gt~~ll~a~~~~~-~~r~I~~SS~~vyg~~~-----~~~~~E~~~ 134 (600)
|+|||+||...... ...++... ++.|+.++.+|+++|++.+ +++||++||.++||... ..+++|+.+
T Consensus 81 d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~ 160 (353)
T PLN02896 81 DGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQ 160 (353)
T ss_pred CEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccC
Confidence 99999999875432 22344443 4455699999999998875 78999999999998532 135677632
Q ss_pred C--------CCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCC
Q psy16545 135 T--------GNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKP 206 (600)
Q Consensus 135 ~--------~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (600)
. ..+.++|+.||+++|++++.+++++ +++++++||++||||+..+.+ ..++..+.....|...
T Consensus 161 ~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~vyGp~~~~~~--------~~~~~~~~~~~~g~~~ 231 (353)
T PLN02896 161 TPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN-GIDLVSVITTTVAGPFLTPSV--------PSSIQVLLSPITGDSK 231 (353)
T ss_pred CcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc-CCeEEEEcCCcccCCCcCCCC--------CchHHHHHHHhcCCcc
Confidence 1 0244689999999999999998877 999999999999999754221 2344444443333322
Q ss_pred eEEEecCC---cccccCcceEEeeecccccc
Q psy16545 207 HFTVFGAD---YETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 207 ~~~v~g~g---~~~~~~~~v~d~v~~~~~a~ 234 (600)
.+++++.. ...|+|+|++|+++++..++
T Consensus 232 ~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l 262 (353)
T PLN02896 232 LFSILSAVNSRMGSIALVHIEDICDAHIFLM 262 (353)
T ss_pred ccccccccccccCceeEEeHHHHHHHHHHHH
Confidence 23333311 12469999999998766553
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.2e-20 Score=189.88 Aligned_cols=212 Identities=40% Similarity=0.600 Sum_probs=162.4
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecc--------------------cccccccChHHhhhHHhhhhcccccccCCCC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEA--------------------RREGDIVSMYANTDLAQKELGWSARCTHDID 68 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~--------------------~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d 68 (600)
|||++|++|+.+.+... ..+.+++.++ ...+|+.+.+++.+ ++...++|
T Consensus 4 V~GatG~iG~~l~~~l~--~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---------~~~~~~~d 72 (328)
T TIGR01179 4 VTGGAGYIGSHTVRQLL--ESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDR---------LFEEHKID 72 (328)
T ss_pred EeCCCCHHHHHHHHHHH--hCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHH---------HHHhCCCc
Confidence 79999999999965332 1111121111 11679999888888 55544799
Q ss_pred EEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q psy16545 69 CVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHF 148 (600)
Q Consensus 69 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~ 148 (600)
+|||+||.........++...++.|+.++.+++++|.+.+++++|++||.++||.....+++|+++. .|.++|+.+|.+
T Consensus 73 ~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~-~~~~~y~~sK~~ 151 (328)
T TIGR01179 73 AVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPL-GPINPYGRSKLM 151 (328)
T ss_pred EEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCC-CCCCchHHHHHH
Confidence 9999999865444445667789999999999999999998899999999999987666678999998 799999999999
Q ss_pred HHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEec------CCcccccCcc
Q psy16545 149 IEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG------ADYETEDGTG 222 (600)
Q Consensus 149 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g------~g~~~~~~~~ 222 (600)
+|++++.++.+..+++++++||+++|||...+.++....+ ...+++.+.....+..+++.++| +|.+.++|+|
T Consensus 152 ~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~ 230 (328)
T TIGR01179 152 SERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPG-ITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIH 230 (328)
T ss_pred HHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcc-cchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeee
Confidence 9999999887634899999999999999766554443222 24577777776665555665554 6778899999
Q ss_pred eEEeeeccccc
Q psy16545 223 KVVAIDNFVNS 233 (600)
Q Consensus 223 v~d~v~~~~~a 233 (600)
+.|+++.+..+
T Consensus 231 ~~D~a~~~~~~ 241 (328)
T TIGR01179 231 VMDLADAHLAA 241 (328)
T ss_pred HHHHHHHHHHH
Confidence 99988876654
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.6e-20 Score=190.29 Aligned_cols=195 Identities=16% Similarity=0.111 Sum_probs=142.7
Q ss_pred cCCCCcchHHHHHHHhhhccCC--------------------------CccEEecccccccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGK--------------------------PVPYIVEARREGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~--------------------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
-|||++|++|+++.+.....+. +++++ .+|+++.+.+.+ +
T Consensus 9 lVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~D~~d~~~~~~---------~ 74 (325)
T PLN02989 9 CVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLF-----KADLLDEGSFEL---------A 74 (325)
T ss_pred EEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEE-----eCCCCCchHHHH---------H
Confidence 5899999999999653221111 13334 678888888777 6
Q ss_pred cccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc-CCCeEEEecCccccCCC-----CCCCCCCCCCC
Q psy16545 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTVYGEP-----QFLPITEDHPT 135 (600)
Q Consensus 62 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~r~I~~SS~~vyg~~-----~~~~~~E~~~~ 135 (600)
++ ++|+||||||.........++...+++|+.++.+++++|.+. ++++||++||..+|+.. ...+++|+++.
T Consensus 75 ~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~ 152 (325)
T PLN02989 75 ID--GCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFT 152 (325)
T ss_pred Hc--CCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCC
Confidence 65 699999999976443334556778999999999999999885 57899999998877543 23467888877
Q ss_pred CCC------CChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEE
Q psy16545 136 GNI------KNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFT 209 (600)
Q Consensus 136 ~~p------~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (600)
.| .++|+.||..+|++++.+.+++ +++++++||+++|||...+.. +.....+.+.+.++ .+
T Consensus 153 -~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~vyGp~~~~~~--------~~~~~~i~~~~~~~-~~-- 219 (325)
T PLN02989 153 -NPSFAEERKQWYVLSKTLAEDAAWRFAKDN-EIDLIVLNPGLVTGPILQPTL--------NFSVAVIVELMKGK-NP-- 219 (325)
T ss_pred -chhHhcccccchHHHHHHHHHHHHHHHHHc-CCeEEEEcCCceeCCCCCCCC--------CchHHHHHHHHcCC-CC--
Confidence 55 3689999999999999998876 999999999999999743211 11233455544332 22
Q ss_pred EecCCcccccCcceEEeeecccccc
Q psy16545 210 VFGADYETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 210 v~g~g~~~~~~~~v~d~v~~~~~a~ 234 (600)
++ .+.|+|+|++|+++++..++
T Consensus 220 -~~--~~~r~~i~v~Dva~a~~~~l 241 (325)
T PLN02989 220 -FN--TTHHRFVDVRDVALAHVKAL 241 (325)
T ss_pred -CC--CcCcCeeEHHHHHHHHHHHh
Confidence 23 35689999999998776553
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.8e-20 Score=180.30 Aligned_cols=131 Identities=35% Similarity=0.536 Sum_probs=118.1
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 332 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~ 332 (600)
+++++.+|+.+.+.+.++++..++|+|||+|+.........++...++.|+.++.+++++|++.+++||||+||..+|+.
T Consensus 43 ~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~ 122 (236)
T PF01370_consen 43 NVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGD 122 (236)
T ss_dssp TEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTS
T ss_pred eEEEEEeeccccccccccccccCceEEEEeeccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 78999999999999999999777899999999865444557889999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCC
Q psy16545 333 PQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTG 387 (600)
Q Consensus 333 ~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~ 387 (600)
....+++|+.+..|. ++|+.+| ...|++++.+.+.++++++++||++ +|++
T Consensus 123 ~~~~~~~e~~~~~~~-~~Y~~~K---~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 123 PDGEPIDEDSPINPL-SPYGASK---RAAEELLRDYAKKYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp SSSSSBETTSGCCHS-SHHHHHH---HHHHHHHHHHHHHHTSEEEEEEESEEESTT
T ss_pred ccccccccccccccc-ccccccc---cccccccccccccccccccccccccccccc
Confidence 877889999988665 8899999 8899999999999999999999987 5554
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.5e-20 Score=187.78 Aligned_cols=187 Identities=21% Similarity=0.229 Sum_probs=141.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------------cccccChHHhhhHHhhhhcccccccCCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------------EGDIVSMYANTDLAQKELGWSARCTHDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d 68 (600)
.|||++|++|+++.+.....+...+++++++. .+|++|.+.+.+ ++. ++|
T Consensus 8 LVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~---------~~~--~iD 76 (324)
T TIGR03589 8 LITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTR---------ALR--GVD 76 (324)
T ss_pred EEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHH---------HHh--cCC
Confidence 58999999999996532211111122222211 679999888887 665 699
Q ss_pred EEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q psy16545 69 CVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHF 148 (600)
Q Consensus 69 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~ 148 (600)
+|||+||.........++...+++|+.|+.+++++|++.++++||++||.. +. .|.++|+.||.+
T Consensus 77 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~--------------~~-~p~~~Y~~sK~~ 141 (324)
T TIGR03589 77 YVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDK--------------AA-NPINLYGATKLA 141 (324)
T ss_pred EEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCC--------------CC-CCCCHHHHHHHH
Confidence 999999986544445567789999999999999999999989999999953 22 467899999999
Q ss_pred HHHHHHHHHhh--cCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEe
Q psy16545 149 IEEMLKDLSKA--HKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVA 226 (600)
Q Consensus 149 ~e~~~~~~~~~--~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~ 226 (600)
+|++++.++.. ..+++++++|||+||||. .++++.+.+.+.....++++ ++|.+.|+|+|++|+
T Consensus 142 ~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~-------------~~~i~~~~~~~~~~~~~~~i-~~~~~~r~~i~v~D~ 207 (324)
T TIGR03589 142 SDKLFVAANNISGSKGTRFSVVRYGNVVGSR-------------GSVVPFFKSLKEEGVTELPI-TDPRMTRFWITLEQG 207 (324)
T ss_pred HHHHHHHHHhhccccCcEEEEEeecceeCCC-------------CCcHHHHHHHHHhCCCCeee-CCCCceEeeEEHHHH
Confidence 99999876532 138999999999999984 23678777766533235776 478999999999999
Q ss_pred eecccccc
Q psy16545 227 IDNFVNSV 234 (600)
Q Consensus 227 v~~~~~a~ 234 (600)
++.+..++
T Consensus 208 a~a~~~al 215 (324)
T TIGR03589 208 VNFVLKSL 215 (324)
T ss_pred HHHHHHHH
Confidence 98777654
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-19 Score=186.68 Aligned_cols=203 Identities=16% Similarity=0.160 Sum_probs=142.9
Q ss_pred CCCCcchHHHHHHHhhhccCCCc-cEEecccc--------------cccccChHHhhhHHhhhhcccccc--cCCCCEEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPV-PYIVEARR--------------EGDIVSMYANTDLAQKELGWSARC--THDIDCVI 71 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~-~~~~~~~~--------------~~Dl~~~~~~~~~~~~~~~~~~~~--~~~~d~Vi 71 (600)
|||++|++|.++.+.... .+. +++++++. .+|+.+.+.++. +.. ..++|+||
T Consensus 3 ItGatG~iG~~l~~~L~~--~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---------~~~~~~~~~D~vv 71 (314)
T TIGR02197 3 VTGGAGFIGSNLVKALNE--RGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDR---------LEKGAFGKIEAIF 71 (314)
T ss_pred EeCCcchhhHHHHHHHHH--cCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHH---------HHhhccCCCCEEE
Confidence 799999999999664433 333 34444432 234444444443 221 13799999
Q ss_pred EcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q psy16545 72 HFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEE 151 (600)
Q Consensus 72 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~ 151 (600)
|||+.... ...++...+++|+.++.+|+++|++.++ +||++||.++|+... .+.+|+++...|.++|+.||..+|+
T Consensus 72 h~A~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~-~~~~e~~~~~~p~~~Y~~sK~~~e~ 147 (314)
T TIGR02197 72 HQGACSDT--TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGE-AGFREGRELERPLNVYGYSKFLFDQ 147 (314)
T ss_pred ECccccCc--cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCC-CCcccccCcCCCCCHHHHHHHHHHH
Confidence 99997542 3456777899999999999999999887 899999999998754 3555655431588999999999999
Q ss_pred HHHHHHhh-cCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEe------cCCcccccCcceE
Q psy16545 152 MLKDLSKA-HKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVF------GADYETEDGTGKV 224 (600)
Q Consensus 152 ~~~~~~~~-~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~------g~g~~~~~~~~v~ 224 (600)
+++++..+ ..+++++++||+++|||+.... +....++..+...+. .++++.++ ++|.+.|+++|++
T Consensus 148 ~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~i~v~ 220 (314)
T TIGR02197 148 YVRRRVLPEALSAQVVGLRYFNVYGPREYHK------GKMASVAFHLFNQIK-AGGNVKLFKSSEGFKDGEQLRDFVYVK 220 (314)
T ss_pred HHHHHhHhhccCCceEEEEEeeccCCCCCCC------CCcccHHHHHHHHHh-cCCCeEEecCccccCCCCceeeeEEHH
Confidence 99875432 2367999999999999974321 112345555554444 33455554 5788999999999
Q ss_pred Eeeeccccc
Q psy16545 225 VAIDNFVNS 233 (600)
Q Consensus 225 d~v~~~~~a 233 (600)
|+++.+..+
T Consensus 221 D~a~~i~~~ 229 (314)
T TIGR02197 221 DVVDVNLWL 229 (314)
T ss_pred HHHHHHHHH
Confidence 988866644
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.6e-20 Score=182.10 Aligned_cols=186 Identities=24% Similarity=0.220 Sum_probs=136.4
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------------------cccccChHHhhhHHhhhhcccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------------EGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
|||++|++|+.|.+.....++ -..+.+|+. .+|++|.+.+.+ +
T Consensus 3 VTGa~GSIGseL~rql~~~~p-~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~---------~ 72 (293)
T PF02719_consen 3 VTGAGGSIGSELVRQLLRYGP-KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNR---------I 72 (293)
T ss_dssp EETTTSHHHHHHHHHHHCCB--SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHH---------H
T ss_pred EEccccHHHHHHHHHHHhcCC-CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHH---------H
Confidence 799999999999653321111 112222222 578899998888 7
Q ss_pred cccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 62 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
+++.++|+|||.||....+..+.+|.+.+++|+.||.|++++|.++++++||++||.-. . .|.+.
T Consensus 73 ~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA--------------v-~Ptnv 137 (293)
T PF02719_consen 73 FEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA--------------V-NPTNV 137 (293)
T ss_dssp TT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC--------------S-S--SH
T ss_pred HhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc--------------C-CCCcH
Confidence 77789999999999999888899999999999999999999999999999999999632 2 68899
Q ss_pred HHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCccccc
Q psy16545 142 YGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETED 219 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~ 219 (600)
||.||..+|.+++.++... .+.+++++|+|||.|.. ++++|.|.+... .++|+++ .++...|-
T Consensus 138 mGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~-------------GSVip~F~~Qi~-~g~PlTv-T~p~mtRf 202 (293)
T PF02719_consen 138 MGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR-------------GSVIPLFKKQIK-NGGPLTV-TDPDMTRF 202 (293)
T ss_dssp HHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT-------------TSCHHHHHHHHH-TTSSEEE-CETT-EEE
T ss_pred HHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC-------------CcHHHHHHHHHH-cCCccee-CCCCcEEE
Confidence 9999999999999988754 36789999999999985 679999998887 6689996 56788888
Q ss_pred CcceEEeeecccccc
Q psy16545 220 GTGKVVAIDNFVNSV 234 (600)
Q Consensus 220 ~~~v~d~v~~~~~a~ 234 (600)
|+-++++++-+.++.
T Consensus 203 fmti~EAv~Lvl~a~ 217 (293)
T PF02719_consen 203 FMTIEEAVQLVLQAA 217 (293)
T ss_dssp EE-HHHHHHHHHHHH
T ss_pred EecHHHHHHHHHHHH
Confidence 888888776555553
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.7e-19 Score=187.11 Aligned_cols=221 Identities=21% Similarity=0.282 Sum_probs=156.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
..+++++.+|+.+ +.+++...++|+|||+++. +..++.+++++|++.|++||||+||..+|
T Consensus 109 ~~~v~~v~~D~~d---~~~~~~~~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vy 169 (378)
T PLN00016 109 SAGVKTVWGDPAD---VKSKVAGAGFDVVYDNNGK----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVY 169 (378)
T ss_pred hcCceEEEecHHH---HHhhhccCCccEEEeCCCC----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhc
Confidence 3468899999876 4455544479999998652 13468899999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcc
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVP 409 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~ 409 (600)
|.....+..|+++..|. . +| ..+|.+++ ..+++++++||++ +|++....+
T Consensus 170 g~~~~~p~~E~~~~~p~----~-sK---~~~E~~l~----~~~l~~~ilRp~~vyG~~~~~~~----------------- 220 (378)
T PLN00016 170 KKSDEPPHVEGDAVKPK----A-GH---LEVEAYLQ----KLGVNWTSFRPQYIYGPGNNKDC----------------- 220 (378)
T ss_pred CCCCCCCCCCCCcCCCc----c-hH---HHHHHHHH----HcCCCeEEEeceeEECCCCCCch-----------------
Confidence 97666677888766543 2 67 66787665 4589999999876 444322110
Q ss_pred eEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhh
Q psy16545 410 YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRT 489 (600)
Q Consensus 410 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 489 (600)
...++..+ ..+.++++ .+.|.+. ++
T Consensus 221 -------------------------------------------~~~~~~~~--~~~~~i~~------~g~g~~~----~~ 245 (378)
T PLN00016 221 -------------------------------------------EEWFFDRL--VRGRPVPI------PGSGIQL----TQ 245 (378)
T ss_pred -------------------------------------------HHHHHHHH--HcCCceee------cCCCCee----ec
Confidence 00111111 12444433 1344444 88
Q ss_pred hhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC-CceeEeEcCCCCCccHHHHHHHHhhhcCCccccccc-CCC-
Q psy16545 490 FERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP-VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVE-ARR- 566 (600)
Q Consensus 490 fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~-~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~-~~~- 566 (600)
|+| ++|+++++..++..+ ..+++||+++++.+|+.|+++.+.+.+|.+.++... +..
T Consensus 246 ~i~--------------------v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~ 305 (378)
T PLN00016 246 LGH--------------------VKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAV 305 (378)
T ss_pred eec--------------------HHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCcccc
Confidence 888 899999999988764 347899999999999999999999999986544321 111
Q ss_pred --------CCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 567 --------EGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 567 --------~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+....+..+|++|++++|||+|+++++.
T Consensus 306 ~~~~~~~~p~~~~~~~~d~~ka~~~LGw~p~~~l~e 341 (378)
T PLN00016 306 GFGAKKAFPFRDQHFFASPRKAKEELGWTPKFDLVE 341 (378)
T ss_pred CccccccccccccccccCHHHHHHhcCCCCCCCHHH
Confidence 1123345679999999999999998864
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-19 Score=186.81 Aligned_cols=197 Identities=13% Similarity=0.114 Sum_probs=139.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
.|||++|++|+++.+.. ...+.++++++|+ .+|+++++.+.+ +++
T Consensus 8 lVtGatGfIG~~l~~~L--~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---------~~~- 75 (322)
T PLN02662 8 CVTGASGYIASWLVKLL--LQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDS---------VVD- 75 (322)
T ss_pred EEECChHHHHHHHHHHH--HHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHH---------HHc-
Confidence 48999999999995532 2222222222211 567777777766 665
Q ss_pred CCCCEEEEcCcccCcccCCCChh-hhHHhHHHHHHHHHHHHHHc-CCCeEEEecCcc--ccCCC---CCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGESMQEPL-MYYKNNLIATINLLEVMKSH-GVYQLVFSSSCT--VYGEP---QFLPITEDHPTGN 137 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~~~~~-~~~~~Nv~gt~~ll~a~~~~-~~~r~I~~SS~~--vyg~~---~~~~~~E~~~~~~ 137 (600)
++|+|||+|+.... ...++. ..+++|+.|+.+++++|.+. +++|||++||++ +|+.. ...+++|+.+. .
T Consensus 76 -~~d~Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~-~ 151 (322)
T PLN02662 76 -GCEGVFHTASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFS-D 151 (322)
T ss_pred -CCCEEEEeCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCC-C
Confidence 78999999997632 223443 68899999999999999987 889999999986 36532 22467888766 4
Q ss_pred C------CChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEe
Q psy16545 138 I------KNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVF 211 (600)
Q Consensus 138 p------~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 211 (600)
| .++|+.||..+|++++.+.+++ +++++++||+++|||...+.. ......+.+.+.+ ++ ..
T Consensus 152 p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lRp~~v~Gp~~~~~~--------~~~~~~~~~~~~~--~~--~~ 218 (322)
T PLN02662 152 PAFCEESKLWYVLSKTLAEEAAWKFAKEN-GIDMVTINPAMVIGPLLQPTL--------NTSAEAILNLING--AQ--TF 218 (322)
T ss_pred hhHhhcccchHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCcccCCCCCCCC--------CchHHHHHHHhcC--Cc--cC
Confidence 4 3689999999999999988776 999999999999999643211 1122334444432 22 12
Q ss_pred cCCcccccCcceEEeeeccccccc
Q psy16545 212 GADYETEDGTGKVVAIDNFVNSVH 235 (600)
Q Consensus 212 g~g~~~~~~~~v~d~v~~~~~a~~ 235 (600)
+.+.|+|+|++|+++++..++.
T Consensus 219 --~~~~~~~i~v~Dva~a~~~~~~ 240 (322)
T PLN02662 219 --PNASYRWVDVRDVANAHIQAFE 240 (322)
T ss_pred --CCCCcCeEEHHHHHHHHHHHhc
Confidence 3467999999999988776644
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.2e-19 Score=182.21 Aligned_cols=206 Identities=21% Similarity=0.290 Sum_probs=171.7
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
..+.++-||+.|.+.+..+++.+++|+|||+||...++-++.+|.+.+++|+.||.|++++|.+.++++||.+||..
T Consensus 302 ~~~~~~igdVrD~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDK--- 378 (588)
T COG1086 302 LKLRFYIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDK--- 378 (588)
T ss_pred cceEEEecccccHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCc---
Confidence 56789999999999999999988899999999999999999999999999999999999999999999999999943
Q ss_pred CCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH-h--CCCCeeEeecccCCCCcchHHHHHHHHHHHhCCCCc
Q psy16545 332 EPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV-T--GNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKPV 408 (600)
Q Consensus 332 ~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~-~--~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~ 408 (600)
..+|. |.||.|| +.+|.++..+.+. . +.+++.+|++|+-+..|+-+
T Consensus 379 -----------AV~Pt-NvmGaTK---r~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSVi---------------- 427 (588)
T COG1086 379 -----------AVNPT-NVMGATK---RLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVI---------------- 427 (588)
T ss_pred -----------ccCCc-hHhhHHH---HHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCH----------------
Confidence 23455 8999999 9999999999874 3 38999999999644444432
Q ss_pred ceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhh
Q psy16545 409 PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLR 488 (600)
Q Consensus 409 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 488 (600)
| -+.+.+.+ |.|+|++. .+.+ |
T Consensus 428 ------------------------------P---------------lFk~QI~~--GgplTvTd-----p~mt------R 449 (588)
T COG1086 428 ------------------------------P---------------LFKKQIAE--GGPLTVTD-----PDMT------R 449 (588)
T ss_pred ------------------------------H---------------HHHHHHHc--CCCccccC-----CCce------e
Confidence 2 12222323 88888853 4554 8
Q ss_pred hhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcC----CcccccccC
Q psy16545 489 TFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTG----KPVPYIVEA 564 (600)
Q Consensus 489 ~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g----~~~~~~~~~ 564 (600)
-|+. +.+.++.+.++......|++|-+-.|+++++.|+|+.+.+++| .++++.+..
T Consensus 450 yfMT--------------------I~EAv~LVlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~g~~~~~dI~I~~~G 509 (588)
T COG1086 450 FFMT--------------------IPEAVQLVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAGQTPPGDIAIKIIG 509 (588)
T ss_pred EEEE--------------------HHHHHHHHHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhCCCCCCCCCeEEEe
Confidence 8888 8888999988887766799999999999999999999999997 356777777
Q ss_pred CCCCC
Q psy16545 565 RREGD 569 (600)
Q Consensus 565 ~~~~~ 569 (600)
.|+|+
T Consensus 510 lRpGE 514 (588)
T COG1086 510 LRPGE 514 (588)
T ss_pred cCCch
Confidence 77665
|
|
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-19 Score=180.92 Aligned_cols=251 Identities=18% Similarity=0.191 Sum_probs=180.2
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
...++++.+|+.+...+.+++. ++ .|+|+|+...+.....++...+++|+.||.+++++|++.++++|||+||..|.
T Consensus 54 ~~~v~~~~~D~~~~~~i~~a~~--~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vv 130 (361)
T KOG1430|consen 54 SGRVTVILGDLLDANSISNAFQ--GA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVV 130 (361)
T ss_pred CCceeEEecchhhhhhhhhhcc--Cc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEE
Confidence 4578999999999999999998 77 89999998777767778999999999999999999999999999999999998
Q ss_pred cCCCC-CCCCCCCCCCC-CCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCC
Q psy16545 331 GEPQF-LPITEDHPTGN-IKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKP 407 (600)
Q Consensus 331 g~~~~-~~~~E~~~~~~-~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~ 407 (600)
..... .--+|+.|... ..++|+.|| ..+|++++..+...++..+.|||.. ||||+..-...++..+..
T Consensus 131 f~g~~~~n~~E~~p~p~~~~d~Y~~sK---a~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~------ 201 (361)
T KOG1430|consen 131 FGGEPIINGDESLPYPLKHIDPYGESK---ALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKN------ 201 (361)
T ss_pred eCCeecccCCCCCCCccccccccchHH---HHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHc------
Confidence 76554 23455554421 236999999 8899999998877778999999876 555554433322222211
Q ss_pred cceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhh
Q psy16545 408 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLL 487 (600)
Q Consensus 408 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 487 (600)
|..+-. .+++..+
T Consensus 202 ---------------------------------------------------------g~~~f~------~g~~~~~---- 214 (361)
T KOG1430|consen 202 ---------------------------------------------------------GGFLFK------IGDGENL---- 214 (361)
T ss_pred ---------------------------------------------------------cCceEE------eeccccc----
Confidence 221111 1333333
Q ss_pred hhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhc-C-CCCceeEeEcCCCCCccHHHHHHHHhhhcCCccc-ccccC
Q psy16545 488 RTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVT-G-KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP-YIVEA 564 (600)
Q Consensus 488 ~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~-~-~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~-~~~~~ 564 (600)
.+|+|++ +++.+| |.. ...+. . ....|++|+|..+.++...+....+.+.+|...+ ....|
T Consensus 215 ~~~~~~~---------Nva~ah---ilA----~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p 278 (361)
T KOG1430|consen 215 NDFTYGE---------NVAWAH---ILA----ARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLP 278 (361)
T ss_pred cceEEec---------hhHHHH---HHH----HHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecc
Confidence 6777766 565565 222 22222 2 3356999999999999888888899999997655 22222
Q ss_pred CC-----------------CCCc-----------cccccChHHHHHHcCceeeEEEEecc
Q psy16545 565 RR-----------------EGDI-----------VSMYANTDLAQRELGWSARCTVKISG 596 (600)
Q Consensus 565 ~~-----------------~~~~-----------~~~~~d~~k~~~~lG~~p~~~l~~~~ 596 (600)
.. +..+ ....+|++|++++|||+|.++++.+.
T Consensus 279 ~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~ 338 (361)
T KOG1430|consen 279 LFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTRTFSIEKAKRELGYKPLVSLEEAI 338 (361)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCCcChhheeeeccccccCHHHHHHhhCCCCcCCHHHHH
Confidence 11 0111 14467999999999999999998753
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.7e-19 Score=186.80 Aligned_cols=183 Identities=23% Similarity=0.205 Sum_probs=155.9
Q ss_pred cCCCCcchHHHHHHHhhhccC---------------------------CCccEEecccccccccChHHhhhHHhhhhccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG---------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWS 60 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~---------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 60 (600)
.|||++|++|..+.+.....+ .++.++ .||++|.+.+.+
T Consensus 254 LVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~-----igdVrD~~~~~~--------- 319 (588)
T COG1086 254 LVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFY-----IGDVRDRDRVER--------- 319 (588)
T ss_pred EEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEE-----ecccccHHHHHH---------
Confidence 589999999999955322111 344555 799999999999
Q ss_pred ccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 61 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
++++.++|+|+|+||....+..+.+|.+.+++|+.||.|++++|.++++++||++||.- .. +|.|
T Consensus 320 ~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDK--------------AV-~PtN 384 (588)
T COG1086 320 AMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDK--------------AV-NPTN 384 (588)
T ss_pred HHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCc--------------cc-CCch
Confidence 88877899999999999999999999999999999999999999999999999999952 33 6889
Q ss_pred hHHHHHHHHHHHHHHHHhhcC--CceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccc
Q psy16545 141 VYGKTKHFIEEMLKDLSKAHK--EWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETE 218 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~ 218 (600)
.||.||..+|.+++.++.+.. +-+++++|+|||.|.. ++++|.|.+... +++|+++ .++.-.|
T Consensus 385 vmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-------------GSViPlFk~QI~-~GgplTv-Tdp~mtR 449 (588)
T COG1086 385 VMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-------------GSVIPLFKKQIA-EGGPLTV-TDPDMTR 449 (588)
T ss_pred HhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-------------CCCHHHHHHHHH-cCCCccc-cCCCcee
Confidence 999999999999999987553 4889999999999985 679999998887 6689996 6788999
Q ss_pred cCcceEEeeecccccc
Q psy16545 219 DGTGKVVAIDNFVNSV 234 (600)
Q Consensus 219 ~~~~v~d~v~~~~~a~ 234 (600)
-|.-+.+.++-..++.
T Consensus 450 yfMTI~EAv~LVlqA~ 465 (588)
T COG1086 450 FFMTIPEAVQLVLQAG 465 (588)
T ss_pred EEEEHHHHHHHHHHHH
Confidence 9998888877666553
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.6e-19 Score=188.26 Aligned_cols=199 Identities=15% Similarity=0.073 Sum_probs=137.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
.|||++|++|+++.+.. ...+.++++++|. .+|+++.+.+.+ ++.
T Consensus 9 LVTGatGfIGs~l~~~L--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~---------~~~- 76 (351)
T PLN02650 9 CVTGASGFIGSWLVMRL--LERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDD---------AIR- 76 (351)
T ss_pred EEeCCcHHHHHHHHHHH--HHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHH---------HHh-
Confidence 48999999999996532 2222222221111 578888877777 665
Q ss_pred CCCCEEEEcCcccCcccCCCCh-hhhHHhHHHHHHHHHHHHHHcC-CCeEEEecCccccCCC-CCCC-CCCCCC------
Q psy16545 65 HDIDCVIHFAAVKAVGESMQEP-LMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVYGEP-QFLP-ITEDHP------ 134 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~~~~-~~~~~~Nv~gt~~ll~a~~~~~-~~r~I~~SS~~vyg~~-~~~~-~~E~~~------ 134 (600)
++|+|||+|+..... ..++ ...+++|+.|+.+|+++|++.+ +++||++||.++|+.. ...+ ++|+..
T Consensus 77 -~~d~ViH~A~~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~ 153 (351)
T PLN02650 77 -GCTGVFHVATPMDFE--SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFC 153 (351)
T ss_pred -CCCEEEEeCCCCCCC--CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhh
Confidence 789999999875321 2233 4688999999999999999976 7899999999777543 2233 466532
Q ss_pred ---CCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEe
Q psy16545 135 ---TGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVF 211 (600)
Q Consensus 135 ---~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 211 (600)
. .|.++|+.||.++|++++.+++++ +++++++||++||||..... ....++..+.. ..+. .. .+
T Consensus 154 ~~~~-~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilRp~~v~Gp~~~~~-------~~~~~~~~~~~-~~~~-~~--~~ 220 (351)
T PLN02650 154 RRKK-MTGWMYFVSKTLAEKAAWKYAAEN-GLDFISIIPTLVVGPFISTS-------MPPSLITALSL-ITGN-EA--HY 220 (351)
T ss_pred hccc-cccchHHHHHHHHHHHHHHHHHHc-CCeEEEECCCceECCCCCCC-------CCccHHHHHHH-hcCC-cc--cc
Confidence 2 345789999999999999998886 99999999999999964321 11223333321 2222 11 13
Q ss_pred cCCcccccCcceEEeeeccccccc
Q psy16545 212 GADYETEDGTGKVVAIDNFVNSVH 235 (600)
Q Consensus 212 g~g~~~~~~~~v~d~v~~~~~a~~ 235 (600)
+. .+.|+|+|++|+++++..++.
T Consensus 221 ~~-~~~r~~v~V~Dva~a~~~~l~ 243 (351)
T PLN02650 221 SI-IKQGQFVHLDDLCNAHIFLFE 243 (351)
T ss_pred Cc-CCCcceeeHHHHHHHHHHHhc
Confidence 32 345899999999988776543
|
|
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-19 Score=179.07 Aligned_cols=200 Identities=19% Similarity=0.148 Sum_probs=153.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTHD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~ 66 (600)
-|||+.|++|+++.+.........+....|+. .+|+.+...+.+ +++ +
T Consensus 8 lVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~---------a~~--~ 76 (361)
T KOG1430|consen 8 LVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISN---------AFQ--G 76 (361)
T ss_pred EEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhh---------hcc--C
Confidence 48999999999995533222212233322332 578888877777 776 7
Q ss_pred CCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCC-CCCCCCCCCC-CCCChHHH
Q psy16545 67 IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQF-LPITEDHPTG-NIKNVYGK 144 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~-~~~~E~~~~~-~p~s~Y~~ 144 (600)
+ .|+|||+...+.....+++..+++|+.||.+++++|++.+++++||+||..|...... ...+|+.|.. ....+|+.
T Consensus 77 ~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~ 155 (361)
T KOG1430|consen 77 A-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGE 155 (361)
T ss_pred c-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccch
Confidence 7 8999998877666667789999999999999999999999999999999998765443 2335554430 33468999
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceE
Q psy16545 145 TKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKV 224 (600)
Q Consensus 145 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~ 224 (600)
||+.+|+++++++... ++..++|||..||||++ ..+++.+...+. .+......|++..+-+++++.
T Consensus 156 sKa~aE~~Vl~an~~~-~l~T~aLR~~~IYGpgd------------~~~~~~i~~~~~-~g~~~f~~g~~~~~~~~~~~~ 221 (361)
T KOG1430|consen 156 SKALAEKLVLEANGSD-DLYTCALRPPGIYGPGD------------KRLLPKIVEALK-NGGFLFKIGDGENLNDFTYGE 221 (361)
T ss_pred HHHHHHHHHHHhcCCC-CeeEEEEccccccCCCC------------ccccHHHHHHHH-ccCceEEeeccccccceEEec
Confidence 9999999999988644 79999999999999974 457888888776 667777889988888888888
Q ss_pred Eeeeccccc
Q psy16545 225 VAIDNFVNS 233 (600)
Q Consensus 225 d~v~~~~~a 233 (600)
.++.+.+.+
T Consensus 222 Nva~ahilA 230 (361)
T KOG1430|consen 222 NVAWAHILA 230 (361)
T ss_pred hhHHHHHHH
Confidence 777665544
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.8e-19 Score=190.95 Aligned_cols=156 Identities=17% Similarity=0.117 Sum_probs=116.3
Q ss_pred CCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc-CCCeEEEecCccccCCCCCCCCCCCC-----------
Q psy16545 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTVYGEPQFLPITEDH----------- 133 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~r~I~~SS~~vyg~~~~~~~~E~~----------- 133 (600)
++|+|||+||..+.. .++...+++|+.||.+|+++|++. ++++||++||.++||...+ .+.|..
T Consensus 112 ~vD~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~-~i~E~~~~~~~~~~~~~ 187 (491)
T PLN02996 112 EIDIVVNLAATTNFD---ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSG-LILEKPFHMGETLNGNR 187 (491)
T ss_pred CCCEEEECccccCCc---CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCc-eeeeecCCCcccccccc
Confidence 799999999988642 467789999999999999999986 7889999999999986431 111110
Q ss_pred -----------------------------------------CCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEeccc
Q psy16545 134 -----------------------------------------PTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFN 172 (600)
Q Consensus 134 -----------------------------------------~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~ 172 (600)
.. .+.++|+.||+.+|++++.++. +++++++||++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~pn~Y~~TK~~aE~lv~~~~~---~lpv~i~RP~~ 263 (491)
T PLN02996 188 KLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLH-GWPNTYVFTKAMGEMLLGNFKE---NLPLVIIRPTM 263 (491)
T ss_pred cCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhC-CCCCchHhhHHHHHHHHHHhcC---CCCEEEECCCE
Confidence 11 2346799999999999987643 89999999999
Q ss_pred ccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 173 PVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 173 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
||||...+..|..+. -.....+...+ +.+....++|+|.+.||++||+|+++++..+
T Consensus 264 V~G~~~~p~~gwi~~---~~~~~~i~~~~-~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a 320 (491)
T PLN02996 264 ITSTYKEPFPGWIEG---LRTIDSVIVGY-GKGKLTCFLADPNSVLDVIPADMVVNAMIVA 320 (491)
T ss_pred eccCCcCCCCCcccc---hhhHHHHHHHh-ccceEeEEecCCCeecceecccHHHHHHHHH
Confidence 999986654433211 01122333322 3555667889999999999999999877655
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.8e-18 Score=172.43 Aligned_cols=225 Identities=14% Similarity=0.147 Sum_probs=151.5
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCcc---ccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccc
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVG---ESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 329 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~v 329 (600)
.+.+...|+.+...+...+...++|+|||+|+..... .+..+|...+++|+.++.+|+++|++.+++ +++.||.+|
T Consensus 35 ~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~v 113 (298)
T PLN02778 35 DFHYGSGRLENRASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCI 113 (298)
T ss_pred EEEEecCccCCHHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceE
Confidence 3444456777877787777777899999999987532 245789999999999999999999999985 566788888
Q ss_pred ccCCC------CCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHH
Q psy16545 330 YGEPQ------FLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERV 402 (600)
Q Consensus 330 Yg~~~------~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~ 402 (600)
|+... ..+++|++++.++.++|+.|| ..+|.+++.|.+ ...+|+.. ++++...
T Consensus 114 y~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK---~~~E~~~~~y~~-----~~~lr~~~~~~~~~~~------------ 173 (298)
T PLN02778 114 FEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTK---AMVEELLKNYEN-----VCTLRVRMPISSDLSN------------ 173 (298)
T ss_pred eCCCCCCCcccCCCCCcCCCCCCCCCchHHHH---HHHHHHHHHhhc-----cEEeeecccCCccccc------------
Confidence 87532 224777776655558999999 889999998764 34555432 2211100
Q ss_pred hCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCccc
Q psy16545 403 TGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTS 482 (600)
Q Consensus 403 ~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 482 (600)
...++..+. .++++... +
T Consensus 174 --------------------------------------------------~~~fi~~~~--~~~~~~~~------~---- 191 (298)
T PLN02778 174 --------------------------------------------------PRNFITKIT--RYEKVVNI------P---- 191 (298)
T ss_pred --------------------------------------------------HHHHHHHHH--cCCCeeEc------C----
Confidence 001111111 12222210 1
Q ss_pred chhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccc---
Q psy16545 483 VLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP--- 559 (600)
Q Consensus 483 ~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~--- 559 (600)
++|+| ++|+++++..++.... .++||+++++.+|+.|+++++++++|....
T Consensus 192 -----~s~~y--------------------v~D~v~al~~~l~~~~-~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~ 245 (298)
T PLN02778 192 -----NSMTI--------------------LDELLPISIEMAKRNL-TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKN 245 (298)
T ss_pred -----CCCEE--------------------HHHHHHHHHHHHhCCC-CCeEEeCCCCcccHHHHHHHHHHHhCCCceecc
Confidence 45666 8999999998886543 469999999999999999999999996422
Q ss_pred ccccCCC---CCCccccccChHHHHHHcCc
Q psy16545 560 YIVEARR---EGDIVSMYANTDLAQRELGW 586 (600)
Q Consensus 560 ~~~~~~~---~~~~~~~~~d~~k~~~~lG~ 586 (600)
+...+.. ........+|++|+++.++=
T Consensus 246 ~~i~~~~~~~~~~~~~~~Ld~~k~~~~~~~ 275 (298)
T PLN02778 246 FTLEEQAKVIVAPRSNNELDTTKLKREFPE 275 (298)
T ss_pred ccHHHHHHHHhCCCccccccHHHHHHhccc
Confidence 1111110 00112336899999997654
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.2e-19 Score=175.59 Aligned_cols=203 Identities=22% Similarity=0.267 Sum_probs=142.9
Q ss_pred EEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCC
Q psy16545 256 FYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQF 335 (600)
Q Consensus 256 ~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~ 335 (600)
.+.+|+.|.+.+..+++..++|+|||+||...++.++.+|.+.+++|+.||.|++++|.++++++||++||.-+.
T Consensus 58 ~vigDvrd~~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv----- 132 (293)
T PF02719_consen 58 PVIGDVRDKERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAV----- 132 (293)
T ss_dssp --CTSCCHHHHHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCS-----
T ss_pred ceeecccCHHHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccC-----
Confidence 458999999999999999999999999999999999999999999999999999999999999999999995432
Q ss_pred CCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecccCCCCcchHHHHHHHHHHHhCCCCcceEE
Q psy16545 336 LPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 412 (600)
Q Consensus 336 ~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~ 412 (600)
+|. +.||.|| +.+|.++..+.... +.+++.+|++|+-...|+-++.
T Consensus 133 ---------~Pt-nvmGatK---rlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~------------------ 181 (293)
T PF02719_consen 133 ---------NPT-NVMGATK---RLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPL------------------ 181 (293)
T ss_dssp ---------S---SHHHHHH---HHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHH------------------
T ss_pred ---------CCC-cHHHHHH---HHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHH------------------
Confidence 344 8999999 89999999998766 6889999999965545553322
Q ss_pred eeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhh
Q psy16545 413 YNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFER 492 (600)
Q Consensus 413 ~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~ 492 (600)
+.+.+. .|.|++++. .+.+ |-|+.
T Consensus 182 -------------------------------------------F~~Qi~--~g~PlTvT~-----p~mt------Rffmt 205 (293)
T PF02719_consen 182 -------------------------------------------FKKQIK--NGGPLTVTD-----PDMT------RFFMT 205 (293)
T ss_dssp -------------------------------------------HHHHHH--TTSSEEECE-----TT-E------EEEE-
T ss_pred -------------------------------------------HHHHHH--cCCcceeCC-----CCcE------EEEec
Confidence 222222 378888843 3444 88877
Q ss_pred hcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCC------cccccccCCC
Q psy16545 493 VTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK------PVPYIVEARR 566 (600)
Q Consensus 493 v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~------~~~~~~~~~~ 566 (600)
+++.++.+..+......+++|.+--|+++++.|+++.+.+..|. ++++.+...|
T Consensus 206 --------------------i~EAv~Lvl~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g~~~~~~~~i~I~~~GlR 265 (293)
T PF02719_consen 206 --------------------IEEAVQLVLQAAALAKGGEIFVLDMGEPVKILDLAEAMIELSGLEPGKKPDIPIKFTGLR 265 (293)
T ss_dssp --------------------HHHHHHHHHHHHHH--TTEEEEE---TCEECCCHHHHHHHHTT-EEEESSSS-EEE----
T ss_pred --------------------HHHHHHHHHHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhcccccccCCCcceEEcCCC
Confidence 88888888887765556899999999999999999999999974 5667777777
Q ss_pred CCCc
Q psy16545 567 EGDI 570 (600)
Q Consensus 567 ~~~~ 570 (600)
+++.
T Consensus 266 pGEK 269 (293)
T PF02719_consen 266 PGEK 269 (293)
T ss_dssp TT--
T ss_pred CCcc
Confidence 7764
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-18 Score=178.70 Aligned_cols=194 Identities=16% Similarity=0.154 Sum_probs=138.7
Q ss_pred cCCCCcchHHHHHHHhhhccCC--------------------------CccEEecccccccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGK--------------------------PVPYIVEARREGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~--------------------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
.|||++|++|.++.+.....+. +++++ .+|+++.+.+.+ +
T Consensus 9 lVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~~~~~~~~---------~ 74 (322)
T PLN02986 9 CVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLF-----KADLLEESSFEQ---------A 74 (322)
T ss_pred EEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEE-----ecCCCCcchHHH---------H
Confidence 4899999999998553221111 23334 578888887777 6
Q ss_pred cccCCCCEEEEcCcccCcccCCCCh-hhhHHhHHHHHHHHHHHHHHc-CCCeEEEecCcccc--CCC---CCCCCCCCCC
Q psy16545 62 RCTHDIDCVIHFAAVKAVGESMQEP-LMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTVY--GEP---QFLPITEDHP 134 (600)
Q Consensus 62 ~~~~~~d~Vih~A~~~~~~~~~~~~-~~~~~~Nv~gt~~ll~a~~~~-~~~r~I~~SS~~vy--g~~---~~~~~~E~~~ 134 (600)
+. ++|+|||+|+..... ..++ ...+++|+.|+.+++++|++. +++|||++||.++| +.. ...+++|+++
T Consensus 75 ~~--~~d~vih~A~~~~~~--~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~ 150 (322)
T PLN02986 75 IE--GCDAVFHTASPVFFT--VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFF 150 (322)
T ss_pred Hh--CCCEEEEeCCCcCCC--CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccC
Confidence 65 799999999975321 2233 347899999999999999986 78999999998764 432 2335778765
Q ss_pred CCC------CCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeE
Q psy16545 135 TGN------IKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHF 208 (600)
Q Consensus 135 ~~~------p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (600)
. . +.++|+.||..+|++++.+.+++ +++++++||+++|||...+.. +.....+.+.+.+ +++
T Consensus 151 ~-~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~-~~~~~~lrp~~v~Gp~~~~~~--------~~~~~~~~~~~~g--~~~ 218 (322)
T PLN02986 151 S-DPSLCRETKNWYPLSKILAENAAWEFAKDN-GIDMVVLNPGFICGPLLQPTL--------NFSVELIVDFING--KNL 218 (322)
T ss_pred C-ChHHhhccccchHHHHHHHHHHHHHHHHHh-CCeEEEEcccceeCCCCCCCC--------CccHHHHHHHHcC--CCC
Confidence 4 3 35789999999999999998876 999999999999999643211 1122334444433 222
Q ss_pred EEecCCcccccCcceEEeeeccccccc
Q psy16545 209 TVFGADYETEDGTGKVVAIDNFVNSVH 235 (600)
Q Consensus 209 ~v~g~g~~~~~~~~v~d~v~~~~~a~~ 235 (600)
++ .+.|+|+|++|+++++..++.
T Consensus 219 --~~--~~~~~~v~v~Dva~a~~~al~ 241 (322)
T PLN02986 219 --FN--NRFYRFVDVRDVALAHIKALE 241 (322)
T ss_pred --CC--CcCcceeEHHHHHHHHHHHhc
Confidence 33 567899999999988776643
|
|
| >KOG1431|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-18 Score=158.47 Aligned_cols=213 Identities=17% Similarity=0.164 Sum_probs=170.5
Q ss_pred CCCCcchHHHHHHHhhhccC-CCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCc-ccCCCCh
Q psy16545 9 GTGQGTSVLQLLRTFERVTG-KPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAV-GESMQEP 86 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~-~~~~~~~ 86 (600)
|||++|.+|.++.+..+..+ ..-..+......+||++.++.++ +++..++..|||+|+.++- ......+
T Consensus 6 VtGg~GLVGsAi~~vv~~q~~~~e~wvf~~skd~DLt~~a~t~~---------lF~~ekPthVIhlAAmVGGlf~N~~yn 76 (315)
T KOG1431|consen 6 VTGGTGLVGSAIVKVVQEQGFDDENWVFIGSKDADLTNLADTRA---------LFESEKPTHVIHLAAMVGGLFHNNTYN 76 (315)
T ss_pred EecCCchHHHHHHHHHHhcCCCCcceEEeccccccccchHHHHH---------HHhccCCceeeehHhhhcchhhcCCCc
Confidence 79999999999977544322 23455656677899999999999 7777799999999999842 3344667
Q ss_pred hhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCC---CC-CChHHHHHHHHHHHHHHHHhhcCC
Q psy16545 87 LMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTG---NI-KNVYGKTKHFIEEMLKDLSKAHKE 162 (600)
Q Consensus 87 ~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~---~p-~s~Y~~sK~~~e~~~~~~~~~~~~ 162 (600)
.++++.|+.-.-|+++.|.++|++++++..|.++|......|++|+.-.+ .| .-.|+.+|..+.-..+.+..++ |
T Consensus 77 ldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qh-g 155 (315)
T KOG1431|consen 77 LDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQH-G 155 (315)
T ss_pred hHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHh-C
Confidence 88999999999999999999999999999999999988889999985222 23 2348999987777779999988 9
Q ss_pred ceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 163 WNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 163 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
...+.+-|.++|||++..++.. ..+...++.++..+-..+..++.+||+|...|.|+|++|.++.++..
T Consensus 156 ~~~tsviPtNvfGphDNfnpe~--sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~v 224 (315)
T KOG1431|consen 156 RDYTSVIPTNVFGPHDNFNPEN--SHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWV 224 (315)
T ss_pred CceeeeccccccCCCCCCCccc--ccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHH
Confidence 9999999999999998755532 23455667777776665555899999999999999999988766533
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.3e-18 Score=173.63 Aligned_cols=186 Identities=17% Similarity=0.164 Sum_probs=130.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcc---cCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVG---ESMQ 84 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~---~~~~ 84 (600)
.|||++||+|+++.+.....+..+.+. ..|+.+.+.+.. .+...++|+||||||..... .+..
T Consensus 13 LVtG~tGfiG~~l~~~L~~~g~~V~~~-----~~~~~~~~~v~~---------~l~~~~~D~ViH~Aa~~~~~~~~~~~~ 78 (298)
T PLN02778 13 LIYGKTGWIGGLLGKLCQEQGIDFHYG-----SGRLENRASLEA---------DIDAVKPTHVFNAAGVTGRPNVDWCES 78 (298)
T ss_pred EEECCCCHHHHHHHHHHHhCCCEEEEe-----cCccCCHHHHHH---------HHHhcCCCEEEECCcccCCCCchhhhh
Confidence 489999999999977544344444445 678888777766 55555799999999987532 2446
Q ss_pred ChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCC------CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q psy16545 85 EPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQ------FLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSK 158 (600)
Q Consensus 85 ~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~------~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~ 158 (600)
++...+++|+.|+.+|+++|++.+++ ++++||.++|+... ..+++|++++..|.++|+.||.++|++++.+++
T Consensus 79 ~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~ 157 (298)
T PLN02778 79 HKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYEN 157 (298)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhc
Confidence 78889999999999999999999985 56677778886432 224777766524568999999999999988653
Q ss_pred hcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 159 AHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 159 ~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
..++|++.++|+... ...+ ++.+ +. .++++...+ ++++|+.|+++++...
T Consensus 158 ------~~~lr~~~~~~~~~~---------~~~~---fi~~-~~-~~~~~~~~~-----~s~~yv~D~v~al~~~ 207 (298)
T PLN02778 158 ------VCTLRVRMPISSDLS---------NPRN---FITK-IT-RYEKVVNIP-----NSMTILDELLPISIEM 207 (298)
T ss_pred ------cEEeeecccCCcccc---------cHHH---HHHH-HH-cCCCeeEcC-----CCCEEHHHHHHHHHHH
Confidence 358888888886421 0112 2333 33 223444443 2689998888766544
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-18 Score=181.33 Aligned_cols=194 Identities=14% Similarity=-0.023 Sum_probs=138.3
Q ss_pred cCCCCcchHHHHHHHhhhccCC-----------------------------CccEEecccccccccChHHhhhHHhhhhc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGK-----------------------------PVPYIVEARREGDIVSMYANTDLAQKELG 58 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~-----------------------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 58 (600)
.|||++|++|+++.+.....+. +++++ .+|++|.+.+.+
T Consensus 57 LVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v-----~~Dl~d~~~l~~------- 124 (367)
T PLN02686 57 CVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTV-----MANLTEPESLHE------- 124 (367)
T ss_pred EEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEE-----EcCCCCHHHHHH-------
Confidence 5899999999999552211111 13344 678999888887
Q ss_pred ccccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc-CCCeEEEecCc--cccCCC--CC--CCCCC
Q psy16545 59 WSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSC--TVYGEP--QF--LPITE 131 (600)
Q Consensus 59 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~r~I~~SS~--~vyg~~--~~--~~~~E 131 (600)
++. ++|+|||+|+...............++|+.++.+++++|++. +++|||++||. .+||.. .. ..++|
T Consensus 125 --~i~--~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E 200 (367)
T PLN02686 125 --AFD--GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDE 200 (367)
T ss_pred --HHH--hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCC
Confidence 666 689999999987543221222456788999999999999986 79999999996 467641 22 23566
Q ss_pred CC------CCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCC
Q psy16545 132 DH------PTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSK 205 (600)
Q Consensus 132 ~~------~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (600)
+. +. .|.++|+.||+++|++++.+++++ +++++++||++||||+..... .. .+.+.+.+
T Consensus 201 ~~~~~~~~~~-~p~~~Y~~sK~~~E~~~~~~~~~~-gl~~v~lRp~~vyGp~~~~~~-------~~----~~~~~~~g-- 265 (367)
T PLN02686 201 ESWSDESFCR-DNKLWYALGKLKAEKAAWRAARGK-GLKLATICPALVTGPGFFRRN-------ST----ATIAYLKG-- 265 (367)
T ss_pred CCCCChhhcc-cccchHHHHHHHHHHHHHHHHHhc-CceEEEEcCCceECCCCCCCC-------Ch----hHHHHhcC--
Confidence 53 33 467889999999999999988776 999999999999999643110 01 12233333
Q ss_pred CeEEEecCCcccccCcceEEeeeccccccc
Q psy16545 206 PHFTVFGADYETEDGTGKVVAIDNFVNSVH 235 (600)
Q Consensus 206 ~~~~v~g~g~~~~~~~~v~d~v~~~~~a~~ 235 (600)
.++++|+|. ++++||+|+++++..++.
T Consensus 266 -~~~~~g~g~--~~~v~V~Dva~A~~~al~ 292 (367)
T PLN02686 266 -AQEMLADGL--LATADVERLAEAHVCVYE 292 (367)
T ss_pred -CCccCCCCC--cCeEEHHHHHHHHHHHHh
Confidence 245677775 469999999988776643
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-17 Score=179.58 Aligned_cols=212 Identities=19% Similarity=0.136 Sum_probs=144.2
Q ss_pred CCceeEEEeecCC-------hhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc-CCCEEE
Q psy16545 251 GKKVDFYSCDLVD-------KNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLV 322 (600)
Q Consensus 251 ~~~v~~i~~Dl~~-------~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~r~v 322 (600)
..+++++.+|+.+ .+.+..+++ ++|+|||+||.... ..++...++.|+.||.+++++|++. ++++||
T Consensus 83 ~~kv~~i~GDl~~~~LGLs~~~~~~~l~~--~vD~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V 157 (491)
T PLN02996 83 SEKVTPVPGDISYDDLGVKDSNLREEMWK--EIDIVVNLAATTNF---DERYDVALGINTLGALNVLNFAKKCVKVKMLL 157 (491)
T ss_pred hcCEEEEecccCCcCCCCChHHHHHHHHh--CCCEEEECccccCC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Confidence 3578999999984 444566666 79999999998654 2467889999999999999999986 689999
Q ss_pred EecCcccccCCCC----CCCCCCC--------------------------------------------C--CCCCCcccc
Q psy16545 323 FSSSCTVYGEPQF----LPITEDH--------------------------------------------P--TGNIKNFYN 352 (600)
Q Consensus 323 ~~SS~~vYg~~~~----~~~~E~~--------------------------------------------~--~~~~~~~Y~ 352 (600)
|+||.+|||.... .+..+.. + .....++|+
T Consensus 158 ~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~ 237 (491)
T PLN02996 158 HVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYV 237 (491)
T ss_pred EEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchH
Confidence 9999999986432 1111000 0 111237899
Q ss_pred cchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHH
Q psy16545 353 LGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFE 431 (600)
Q Consensus 353 ~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~ 431 (600)
.|| ..+|.+++.+. .+++++++||++ +|++...
T Consensus 238 ~TK---~~aE~lv~~~~--~~lpv~i~RP~~V~G~~~~p----------------------------------------- 271 (491)
T PLN02996 238 FTK---AMGEMLLGNFK--ENLPLVIIRPTMITSTYKEP----------------------------------------- 271 (491)
T ss_pred hhH---HHHHHHHHHhc--CCCCEEEECCCEeccCCcCC-----------------------------------------
Confidence 999 88999998875 389999999998 5443211
Q ss_pred HHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcch
Q psy16545 432 RVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGT 511 (600)
Q Consensus 432 ~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~ 511 (600)
.|..+-+.. ....++..+ ..|....+ .|+|.+. +||+|
T Consensus 272 ------~~gwi~~~~-----~~~~i~~~~--~~g~~~~~------~gdg~~~----~D~v~------------------- 309 (491)
T PLN02996 272 ------FPGWIEGLR-----TIDSVIVGY--GKGKLTCF------LADPNSV----LDVIP------------------- 309 (491)
T ss_pred ------CCCcccchh-----hHHHHHHHh--ccceEeEE------ecCCCee----cceec-------------------
Confidence 121111100 000111000 11222222 1455555 99999
Q ss_pred hHHHHHHHhhhhcCCC----CceeEeEcCCC--CCccHHHHHHHHhhhcCC
Q psy16545 512 SVLQLLRTFERVTGKP----VPYIFYNLGTG--QGTSVLQLLRTFERVTGK 556 (600)
Q Consensus 512 ~v~d~~~a~~~~~~~~----~~~~~~nl~~~--~~~s~~e~~~~~~~~~g~ 556 (600)
|+|++.++..++... ..+++||++++ .++|+.|+++.+.+..+.
T Consensus 310 -Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~ 359 (491)
T PLN02996 310 -ADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSK 359 (491)
T ss_pred -ccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhh
Confidence 777888877776531 23679999999 899999999999998874
|
|
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.5e-18 Score=168.60 Aligned_cols=198 Identities=14% Similarity=0.058 Sum_probs=146.6
Q ss_pred cCCCCcchHHHHHHHhh------------------------hcc--CCCccEEecccccccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFE------------------------RVT--GKPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~------------------------~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
+|||++||+|..+.+.. ++. .++++.+ .+||.|++++.+ +
T Consensus 10 cVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~-----~aDL~d~~sf~~---------a 75 (327)
T KOG1502|consen 10 CVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLF-----KADLLDEGSFDK---------A 75 (327)
T ss_pred EEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEE-----eccccccchHHH---------H
Confidence 79999999999883321 111 1235666 789999999998 7
Q ss_pred cccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcC-CCeEEEecCccccCCC-----CCCCCCCCCCC
Q psy16545 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVYGEP-----QFLPITEDHPT 135 (600)
Q Consensus 62 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~r~I~~SS~~vyg~~-----~~~~~~E~~~~ 135 (600)
+. ++|.|||.|..+.+.... ...+..+..+.||.|++++|++.. ++|+|++||++..... ....++|+...
T Consensus 76 i~--gcdgVfH~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~ws 152 (327)
T KOG1502|consen 76 ID--GCDGVFHTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWS 152 (327)
T ss_pred Hh--CCCEEEEeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCC
Confidence 77 899999999998654332 344799999999999999999987 9999999998664322 33456777654
Q ss_pred C-----CCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEE
Q psy16545 136 G-----NIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTV 210 (600)
Q Consensus 136 ~-----~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 210 (600)
. .....|..||..+|+..++++++. +++.+++.|+.|+||...+.. +.....+...+.|..+..
T Consensus 153 d~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~-~~~lv~inP~lV~GP~l~~~l--------~~s~~~~l~~i~G~~~~~-- 221 (327)
T KOG1502|consen 153 DLDFCRCKKLWYALSKTLAEKAAWEFAKEN-GLDLVTINPGLVFGPGLQPSL--------NSSLNALLKLIKGLAETY-- 221 (327)
T ss_pred cHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CccEEEecCCceECCCccccc--------chhHHHHHHHHhcccccC--
Confidence 1 112579999999999999999997 999999999999999755422 334445556565533322
Q ss_pred ecCCcccccCcceEEeeecccccccc
Q psy16545 211 FGADYETEDGTGKVVAIDNFVNSVHI 236 (600)
Q Consensus 211 ~g~g~~~~~~~~v~d~v~~~~~a~~~ 236 (600)
-+ ....++||+|++.+++.+++-
T Consensus 222 -~n--~~~~~VdVrDVA~AHv~a~E~ 244 (327)
T KOG1502|consen 222 -PN--FWLAFVDVRDVALAHVLALEK 244 (327)
T ss_pred -CC--CceeeEeHHHHHHHHHHHHcC
Confidence 22 233489999999988877653
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.7e-18 Score=170.86 Aligned_cols=224 Identities=13% Similarity=0.114 Sum_probs=151.0
Q ss_pred HHHhhcCCccEEEEcccccCccccc--cChHHHHHHHHHHHHHHHHHHHHcCCC--EEEEecCcccccCCCCCCCCCCCC
Q psy16545 268 GEIFAKHDIDCVIHFAAVKAVGESM--QEPLMYYKNNLIATINLLEVMKSHGVY--QLVFSSSCTVYGEPQFLPITEDHP 343 (600)
Q Consensus 268 ~~~l~~~~~d~VihlAa~~~~~~~~--~~~~~~~~~Nv~gt~~ll~~~~~~~~~--r~v~~SS~~vYg~~~~~~~~E~~~ 343 (600)
...+. ++|+|||+|+.......+ ..+..+++.|+.++.+++++|++.+++ +||++||..+||.....+++|+.+
T Consensus 52 ~~~~~--~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~ 129 (292)
T TIGR01777 52 SEALE--GADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDS 129 (292)
T ss_pred hhhcC--CCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccC
Confidence 34444 799999999975432222 245678899999999999999999873 577777788999776678889885
Q ss_pred CCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEEeeCCCCCccc
Q psy16545 344 TGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTS 422 (600)
Q Consensus 344 ~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~ 422 (600)
..+. +.|+..| ...|..+..+ ...+++++++||+. +|++++ ....+..
T Consensus 130 ~~~~-~~~~~~~---~~~e~~~~~~-~~~~~~~~ilR~~~v~G~~~~-~~~~~~~------------------------- 178 (292)
T TIGR01777 130 PAGD-DFLAELC---RDWEEAAQAA-EDLGTRVVLLRTGIVLGPKGG-ALAKMLP------------------------- 178 (292)
T ss_pred CCCC-ChHHHHH---HHHHHHhhhc-hhcCCceEEEeeeeEECCCcc-hhHHHHH-------------------------
Confidence 5442 5555544 4456665544 34689999999887 555432 1100000
Q ss_pred HHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhhhcCCCccccc
Q psy16545 423 VLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 502 (600)
Q Consensus 423 ~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~ 502 (600)
.+....+.+ + +++.++ ++|+|
T Consensus 179 ------------------------------------~~~~~~~~~--~-------g~~~~~----~~~i~---------- 199 (292)
T TIGR01777 179 ------------------------------------PFRLGLGGP--L-------GSGRQW----FSWIH---------- 199 (292)
T ss_pred ------------------------------------HHhcCcccc--c-------CCCCcc----cccEe----------
Confidence 000000111 1 333433 88888
Q ss_pred cCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCC---------CCC-ccc
Q psy16545 503 YNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------EGD-IVS 572 (600)
Q Consensus 503 ~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~---------~~~-~~~ 572 (600)
++|+++++..++..+...++||+++++.+|++|+++.+++.+|.+..+. .|.. +.. ...
T Consensus 200 ----------v~Dva~~i~~~l~~~~~~g~~~~~~~~~~s~~di~~~i~~~~g~~~~~~-~p~~~~~~~~~~~~~~~~~~ 268 (292)
T TIGR01777 200 ----------IEDLVQLILFALENASISGPVNATAPEPVRNKEFAKALARALHRPAFFP-VPAFVLRALLGEMADLLLKG 268 (292)
T ss_pred ----------HHHHHHHHHHHhcCcccCCceEecCCCccCHHHHHHHHHHHhCCCCcCc-CCHHHHHHHhchhhHHHhCC
Confidence 8999999999988765667999999999999999999999999653322 2221 111 134
Q ss_pred cccChHHHHHHcCceeeE-EEEec
Q psy16545 573 MYANTDLAQRELGWSARC-TVKIS 595 (600)
Q Consensus 573 ~~~d~~k~~~~lG~~p~~-~l~~~ 595 (600)
..++++|+++ +||+|++ +++.+
T Consensus 269 ~~~~~~~~~~-~g~~~~~~~~~~~ 291 (292)
T TIGR01777 269 QRVLPEKLLE-AGFQFQYPDLDEA 291 (292)
T ss_pred cccccHHHHh-cCCeeeCcChhhc
Confidence 5678899987 9999999 47653
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=3e-17 Score=161.97 Aligned_cols=243 Identities=18% Similarity=0.143 Sum_probs=168.1
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecCccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTV 329 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~r~v~~SS~~v 329 (600)
+++...+.+|+.+.+++.++++ ++|.|||+|......... ...+.++..+.||.|+|++|++.. |||+||+||.++
T Consensus 56 ~~~l~l~~aDL~d~~sf~~ai~--gcdgVfH~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aA 132 (327)
T KOG1502|consen 56 KERLKLFKADLLDEGSFDKAID--GCDGVFHTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAA 132 (327)
T ss_pred cccceEEeccccccchHHHHHh--CCCEEEEeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHH
Confidence 3468999999999999999999 999999999987543322 334799999999999999999997 999999999654
Q ss_pred cc-C----CCCCCCCCCCCCCC-----CCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHH
Q psy16545 330 YG-E----PQFLPITEDHPTGN-----IKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRT 398 (600)
Q Consensus 330 Yg-~----~~~~~~~E~~~~~~-----~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~ 398 (600)
-. . .+..+++|+...++ ....|..|| ..+|+.++.++++.+++.+.+-|+. +||....++..
T Consensus 133 v~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK---~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~---- 205 (327)
T KOG1502|consen 133 VRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSK---TLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNS---- 205 (327)
T ss_pred hccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHH---HHHHHHHHHHHHhCCccEEEecCCceECCCcccccch----
Confidence 33 2 23456888876443 125799999 8899999999999999999888776 55433221110
Q ss_pred HHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCC
Q psy16545 399 FERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTG 478 (600)
Q Consensus 399 ~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 478 (600)
+...++..+ .|...+. .
T Consensus 206 -----------------------------------------------------s~~~~l~~i---~G~~~~~-------~ 222 (327)
T KOG1502|consen 206 -----------------------------------------------------SLNALLKLI---KGLAETY-------P 222 (327)
T ss_pred -----------------------------------------------------hHHHHHHHH---hcccccC-------C
Confidence 111111111 1211110 0
Q ss_pred CcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcc
Q psy16545 479 QGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV 558 (600)
Q Consensus 479 ~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~ 558 (600)
... ..|+| |+|++.|...+++++...+.|.+.+. ..+..|+++++.+.++...
T Consensus 223 n~~------~~~Vd--------------------VrDVA~AHv~a~E~~~a~GRyic~~~-~~~~~ei~~~l~~~~P~~~ 275 (327)
T KOG1502|consen 223 NFW------LAFVD--------------------VRDVALAHVLALEKPSAKGRYICVGE-VVSIKEIADILRELFPDYP 275 (327)
T ss_pred CCc------eeeEe--------------------HHHHHHHHHHHHcCcccCceEEEecC-cccHHHHHHHHHHhCCCCC
Confidence 111 22455 99999999999999888889999865 5559999999999997432
Q ss_pred -cccccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 559 -PYIVEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 559 -~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+................+++|+++ ||+.-.+++++
T Consensus 276 ip~~~~~~~~~~~~~~~~~~~k~k~-lg~~~~~~l~e 311 (327)
T KOG1502|consen 276 IPKKNAEEHEGFLTSFKVSSEKLKS-LGGFKFRPLEE 311 (327)
T ss_pred CCCCCCccccccccccccccHHHHh-cccceecChHH
Confidence 212111112222334579999999 56333555544
|
|
| >KOG1372|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.7e-18 Score=158.17 Aligned_cols=249 Identities=16% Similarity=0.229 Sum_probs=183.7
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCC---CEEEEecCcc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV---YQLVFSSSCT 328 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~---~r~v~~SS~~ 328 (600)
.......+|++|..++.+++...+++-|+|+||+..+.-+++-|.-.-++...||..||++.+.++. -||..+||+.
T Consensus 83 ~~mkLHYgDmTDss~L~k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSE 162 (376)
T KOG1372|consen 83 ASMKLHYGDMTDSSCLIKLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSE 162 (376)
T ss_pred ceeEEeeccccchHHHHHHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHh
Confidence 3457778999999999999999999999999999998888888888888999999999999998763 2899999999
Q ss_pred cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCC
Q psy16545 329 VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKP 407 (600)
Q Consensus 329 vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~ 407 (600)
.||.....|-+|.+|..|. +||+.+| ..+-=++-+|++.+++=.+.--.+| --|+.|.++.
T Consensus 163 lyGkv~e~PQsE~TPFyPR-SPYa~aK---my~~WivvNyREAYnmfAcNGILFNHESPRRGenFV-------------- 224 (376)
T KOG1372|consen 163 LYGKVQEIPQSETTPFYPR-SPYAAAK---MYGYWIVVNYREAYNMFACNGILFNHESPRRGENFV-------------- 224 (376)
T ss_pred hcccccCCCcccCCCCCCC-ChhHHhh---hhheEEEEEhHHhhcceeeccEeecCCCCccccchh--------------
Confidence 9999888899999999987 9999999 4344445555555554433333333 4444444432
Q ss_pred cceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHH-HhCCCCceeeccCCCCCcccchhh
Q psy16545 408 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFER-VTGKPVPYIFYNLGTGQGTSVLQL 486 (600)
Q Consensus 408 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~ 486 (600)
-+.+.+...+ ..|+..-+.+ |+-...
T Consensus 225 ---------------------------------------------TRKItRsvakI~~gqqe~~~L-----GNL~a~--- 251 (376)
T KOG1372|consen 225 ---------------------------------------------TRKITRSVAKISLGQQEKIEL-----GNLSAL--- 251 (376)
T ss_pred ---------------------------------------------hHHHHHHHHHhhhcceeeEEe-----cchhhh---
Confidence 1222222222 1233222222 332322
Q ss_pred hhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccccc-----
Q psy16545 487 LRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYI----- 561 (600)
Q Consensus 487 ~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~----- 561 (600)
|||-| ..|.++|++.+++++.+ +-|.|.+|+..|++|++++.....|..+.+.
T Consensus 252 -RDWGh--------------------A~dYVEAMW~mLQ~d~P-dDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~ 309 (376)
T KOG1372|consen 252 -RDWGH--------------------AGDYVEAMWLMLQQDSP-DDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVD 309 (376)
T ss_pred -cccch--------------------hHHHHHHHHHHHhcCCC-CceEEecCCcccHHHHHHHHHHhhCcEEeecccccc
Confidence 88877 88999999999988744 5789999999999999999988887443332
Q ss_pred ---------------ccCCCCCCccccccChHHHHHHcCceeeEEEE
Q psy16545 562 ---------------VEARREGDIVSMYANTDLAQRELGWSARCTVK 593 (600)
Q Consensus 562 ---------------~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~ 593 (600)
.-=+|+.++..+..|.+|+++.|||+|++++.
T Consensus 310 ~~~~n~~g~v~V~v~~kYyRPtEVd~LqGdasKAk~~LgW~pkv~f~ 356 (376)
T KOG1372|consen 310 EVGKNDDGVVRVKVDPKYYRPTEVDTLQGDASKAKKTLGWKPKVTFP 356 (376)
T ss_pred cccccCCceEEEEecccccCcchhhhhcCChHHHHHhhCCCCccCHH
Confidence 11134556667788999999999999999875
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.74 E-value=9e-19 Score=173.27 Aligned_cols=179 Identities=19% Similarity=0.160 Sum_probs=97.0
Q ss_pred CCCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc
Q psy16545 28 GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH 107 (600)
Q Consensus 28 ~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~ 107 (600)
..+++++ .+|++++..-.. +++|+.+. ..+|+||||||.++... .....+++|+.||.+|++.|.+.
T Consensus 59 ~~ri~~v-----~GDl~~~~lGL~----~~~~~~L~-~~v~~IiH~Aa~v~~~~---~~~~~~~~NV~gt~~ll~la~~~ 125 (249)
T PF07993_consen 59 LSRIEVV-----EGDLSQPNLGLS----DEDYQELA-EEVDVIIHCAASVNFNA---PYSELRAVNVDGTRNLLRLAAQG 125 (249)
T ss_dssp TTTEEEE-----E--TTSGGGG------HHHHHHHH-HH--EEEE--SS-SBS----S--EEHHHHHHHHHHHHHHHTSS
T ss_pred hccEEEE-----eccccccccCCC----hHHhhccc-cccceeeecchhhhhcc---cchhhhhhHHHHHHHHHHHHHhc
Confidence 3467777 788877653222 12222332 26999999999997643 44558899999999999999977
Q ss_pred CCCeEEEecCccccCCCCCCCCCC----------CCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCC
Q psy16545 108 GVYQLVFSSSCTVYGEPQFLPITE----------DHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 108 ~~~r~I~~SS~~vyg~~~~~~~~E----------~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~ 177 (600)
..++|+|+||+.+.+.... .+.| +... ...+.|.+||+.+|++++.++++. +++++|+||+.|+|..
T Consensus 126 ~~~~~~~iSTa~v~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~gY~~SK~~aE~~l~~a~~~~-g~p~~I~Rp~~i~g~~ 202 (249)
T PF07993_consen 126 KRKRFHYISTAYVAGSRPG-TIEEKVYPEEEDDLDPPQ-GFPNGYEQSKWVAERLLREAAQRH-GLPVTIYRPGIIVGDS 202 (249)
T ss_dssp S---EEEEEEGGGTTS-TT-T--SSS-HHH--EEE--T-TSEE-HHHHHHHHHHHHHHHHHHH----EEEEEE-EEE-SS
T ss_pred cCcceEEeccccccCCCCC-cccccccccccccchhhc-cCCccHHHHHHHHHHHHHHHHhcC-CceEEEEecCcccccC
Confidence 6679999999655554332 2211 1222 455789999999999999999876 8999999999999976
Q ss_pred CCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeee
Q psy16545 178 PSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAID 228 (600)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~ 228 (600)
..+.+... +.+...+...+. .+......+++....+++.|+.+++
T Consensus 203 ~~G~~~~~-----~~~~~~~~~~~~-~~~~p~~~~~~~~~~d~vPVD~va~ 247 (249)
T PF07993_consen 203 RTGWWNSD-----DFFPYLLRSCIA-LGAFPDLPGDPDARLDLVPVDYVAR 247 (249)
T ss_dssp SSS---TT-----BHHHHHHHHHHH-H-EEES-SB---TT--EEEHHHHHH
T ss_pred CCceeecc-----chHHHHHHHHHH-cCCcccccCCCCceEeEECHHHHHh
Confidence 66544322 213333333332 3222235566556677777765544
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.5e-17 Score=170.04 Aligned_cols=195 Identities=18% Similarity=0.175 Sum_probs=142.0
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEEEc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHF 73 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~ 73 (600)
|||++|++|+.+.+... ..+.++++++|+ .+|+.+.+++.+ +++ ++|+|||+
T Consensus 5 ItG~~G~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~---------~~~--~~d~vi~~ 71 (328)
T TIGR03466 5 VTGATGFVGSAVVRLLL--EQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRK---------AVA--GCRALFHV 71 (328)
T ss_pred EECCccchhHHHHHHHH--HCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHH---------HHh--CCCEEEEe
Confidence 79999999999965332 122222222221 678888888877 665 78999999
Q ss_pred CcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCC-CCCCCCCCCCCCCCC---CChHHHHHHHH
Q psy16545 74 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE-PQFLPITEDHPTGNI---KNVYGKTKHFI 149 (600)
Q Consensus 74 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~-~~~~~~~E~~~~~~p---~s~Y~~sK~~~ 149 (600)
|+.... ...++...+++|+.++.+++++|++.+++++|++||.++|+. ....+++|+.+. .+ .+.|+.+|.++
T Consensus 72 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~-~~~~~~~~Y~~sK~~~ 148 (328)
T TIGR03466 72 AADYRL--WAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPS-SLDDMIGHYKRSKFLA 148 (328)
T ss_pred ceeccc--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCC-CcccccChHHHHHHHH
Confidence 986532 235677899999999999999999999999999999999985 344578888877 55 46899999999
Q ss_pred HHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeec
Q psy16545 150 EEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDN 229 (600)
Q Consensus 150 e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~ 229 (600)
|++++.+..++ +++++++||+++|||+.... ......+...+.++ .+ .+.+ ..++++|++|+++.
T Consensus 149 e~~~~~~~~~~-~~~~~ilR~~~~~G~~~~~~---------~~~~~~~~~~~~~~-~~--~~~~--~~~~~i~v~D~a~a 213 (328)
T TIGR03466 149 EQAALEMAAEK-GLPVVIVNPSTPIGPRDIKP---------TPTGRIIVDFLNGK-MP--AYVD--TGLNLVHVDDVAEG 213 (328)
T ss_pred HHHHHHHHHhc-CCCEEEEeCCccCCCCCCCC---------CcHHHHHHHHHcCC-Cc--eeeC--CCcceEEHHHHHHH
Confidence 99999998776 89999999999999974311 11112333333322 22 2222 23679999999887
Q ss_pred ccccc
Q psy16545 230 FVNSV 234 (600)
Q Consensus 230 ~~~a~ 234 (600)
+..++
T Consensus 214 ~~~~~ 218 (328)
T TIGR03466 214 HLLAL 218 (328)
T ss_pred HHHHH
Confidence 76654
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.7e-16 Score=161.28 Aligned_cols=226 Identities=12% Similarity=0.039 Sum_probs=158.1
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecCcccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~r~v~~SS~~vY 330 (600)
.+++++.+|+++...+.+++. +++.|+|+++... ....+....++.|+.++.+++++|.+. +++|||++||.+++
T Consensus 57 ~~~~~~~~Dl~d~~~~~~~l~--~~d~v~~~~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~ 132 (297)
T PLN02583 57 ERLKVFDVDPLDYHSILDALK--GCSGLFCCFDPPS--DYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAV 132 (297)
T ss_pred CceEEEEecCCCHHHHHHHHc--CCCEEEEeCccCC--cccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHhe
Confidence 468899999999999999887 7899999875432 112245678999999999999999987 68999999998765
Q ss_pred --cCC---CCCCCCCCCCCCCC-----CcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHH
Q psy16545 331 --GEP---QFLPITEDHPTGNI-----KNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTF 399 (600)
Q Consensus 331 --g~~---~~~~~~E~~~~~~~-----~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~ 399 (600)
+.. ...+++|+++..+. ..+|+.|| ..+|++++.+.+..+++++++||+. +||+......
T Consensus 133 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK---~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~------ 203 (297)
T PLN02583 133 IWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAK---TLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNP------ 203 (297)
T ss_pred ecccccCCCCCCCCcccCCCHHHHhhcccHHHHHH---HHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchh------
Confidence 311 23467887654321 12699999 8899999999888899999999887 4443221100
Q ss_pred HHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCC
Q psy16545 400 ERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQ 479 (600)
Q Consensus 400 ~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 479 (600)
+ +.+. .+. + +.
T Consensus 204 --------------------------------------------------------~------~~~~-~~~----~--~~ 214 (297)
T PLN02583 204 --------------------------------------------------------Y------LKGA-AQM----Y--EN 214 (297)
T ss_pred --------------------------------------------------------h------hcCC-ccc----C--cc
Confidence 0 0000 000 0 11
Q ss_pred cccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCc-c
Q psy16545 480 GTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP-V 558 (600)
Q Consensus 480 ~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~-~ 558 (600)
+. ..|+| |+|+++++..+++.+..++.|+++++......++++++.+.++.- .
T Consensus 215 ~~------~~~v~--------------------V~Dva~a~~~al~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~ 268 (297)
T PLN02583 215 GV------LVTVD--------------------VNFLVDAHIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPS 268 (297)
T ss_pred cC------cceEE--------------------HHHHHHHHHHHhcCcccCCcEEEecCCCccHHHHHHHHHHhCCCCCC
Confidence 11 45666 999999999999876666789999776666788999999998742 1
Q ss_pred cccccCCCCCCccccccChHHHHHHcCce
Q psy16545 559 PYIVEARREGDIVSMYANTDLAQRELGWS 587 (600)
Q Consensus 559 ~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 587 (600)
+..+... ........++++|+++ |||+
T Consensus 269 ~~~~~~~-~~~~~~~~~~~~k~~~-l~~~ 295 (297)
T PLN02583 269 PPPYEMQ-GSEVYQQRIRNKKLNK-LMED 295 (297)
T ss_pred CCccccc-CCCccccccChHHHHH-hCcc
Confidence 1111111 1223456789999988 8986
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-16 Score=162.55 Aligned_cols=190 Identities=13% Similarity=-0.014 Sum_probs=133.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccc-----------------------ccccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEAR-----------------------REGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~-----------------------~~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
.|||++|++|+++.+.. ...+.+++.+.| -.+|++|.+++.+ ++.
T Consensus 10 lVTGatG~IG~~lv~~L--l~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~---------~l~- 77 (297)
T PLN02583 10 CVMDASGYVGFWLVKRL--LSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILD---------ALK- 77 (297)
T ss_pred EEECCCCHHHHHHHHHH--HhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHH---------HHc-
Confidence 58999999999985422 222222222111 0678888888877 676
Q ss_pred CCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc-CCCeEEEecCccccCC--C---CCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTVYGE--P---QFLPITEDHPTGNI 138 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~r~I~~SS~~vyg~--~---~~~~~~E~~~~~~p 138 (600)
++|.|+|+++..... ..+....+++|+.|+.+++++|.+. +++|+|++||.+.++. . ...+++|+++. .+
T Consensus 78 -~~d~v~~~~~~~~~~--~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~-~~ 153 (297)
T PLN02583 78 -GCSGLFCCFDPPSDY--PSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWS-DQ 153 (297)
T ss_pred -CCCEEEEeCccCCcc--cccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCC-CH
Confidence 799999987654321 1245678999999999999999886 6889999999876431 1 12357887654 22
Q ss_pred ------CChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEec
Q psy16545 139 ------KNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG 212 (600)
Q Consensus 139 ------~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g 212 (600)
..+|+.||..+|++++.++++. +++++++||++||||..... .+ .+.+ ..+.++
T Consensus 154 ~~~~~~~~~Y~~sK~~aE~~~~~~~~~~-gi~~v~lrp~~v~Gp~~~~~------------~~----~~~~---~~~~~~ 213 (297)
T PLN02583 154 NFCRKFKLWHALAKTLSEKTAWALAMDR-GVNMVSINAGLLMGPSLTQH------------NP----YLKG---AAQMYE 213 (297)
T ss_pred HHHhhcccHHHHHHHHHHHHHHHHHHHh-CCcEEEEcCCcccCCCCCCc------------hh----hhcC---CcccCc
Confidence 2379999999999999988776 99999999999999964310 11 1111 112233
Q ss_pred CCcccccCcceEEeeeccccccc
Q psy16545 213 ADYETEDGTGKVVAIDNFVNSVH 235 (600)
Q Consensus 213 ~g~~~~~~~~v~d~v~~~~~a~~ 235 (600)
+| .+.++||+|++++++.++.
T Consensus 214 ~~--~~~~v~V~Dva~a~~~al~ 234 (297)
T PLN02583 214 NG--VLVTVDVNFLVDAHIRAFE 234 (297)
T ss_pred cc--CcceEEHHHHHHHHHHHhc
Confidence 33 4579999999999888865
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2e-16 Score=177.08 Aligned_cols=200 Identities=20% Similarity=0.178 Sum_probs=141.8
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 332 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~ 332 (600)
+++++.+|+.+...+.++++ ++|+|||+|+.... .++.|+.++.+++++|++.++++|||+||.+
T Consensus 41 ~v~~v~gDL~D~~~l~~al~--~vD~VVHlAa~~~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~---- 105 (854)
T PRK05865 41 SADFIAADIRDATAVESAMT--GADVVAHCAWVRGR---------NDHINIDGTANVLKAMAETGTGRIVFTSSGH---- 105 (854)
T ss_pred CceEEEeeCCCHHHHHHHHh--CCCEEEECCCcccc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH----
Confidence 47889999999999999888 79999999976321 5689999999999999999999999999953
Q ss_pred CCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceE
Q psy16545 333 PQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYI 411 (600)
Q Consensus 333 ~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 411 (600)
| ..+|.++. .++++++++||++ ||++... +
T Consensus 106 ----------------------K---~aaE~ll~----~~gl~~vILRp~~VYGP~~~~----~---------------- 136 (854)
T PRK05865 106 ----------------------Q---PRVEQMLA----DCGLEWVAVRCALIFGRNVDN----W---------------- 136 (854)
T ss_pred ----------------------H---HHHHHHHH----HcCCCEEEEEeceEeCCChHH----H----------------
Confidence 5 56777664 4689999999887 4442100 0
Q ss_pred EeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhh
Q psy16545 412 FYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFE 491 (600)
Q Consensus 412 ~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi 491 (600)
+..+ .. .++ ++.|.+.+. ++|+
T Consensus 137 ---------------------------------------------i~~l---l~--~~v----~~~G~~~~~----~dfI 158 (854)
T PRK05865 137 ---------------------------------------------VQRL---FA--LPV----LPAGYADRV----VQVV 158 (854)
T ss_pred ---------------------------------------------HHHH---hc--Cce----eccCCCCce----Eeee
Confidence 0000 01 111 112333323 6888
Q ss_pred hhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC-CceeEeEcCCCCCccHHHHHHHHhhhcC---CcccccccCCCC
Q psy16545 492 RVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP-VPYIFYNLGTGQGTSVLQLLRTFERVTG---KPVPYIVEARRE 567 (600)
Q Consensus 492 ~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~-~~~~~~nl~~~~~~s~~e~~~~~~~~~g---~~~~~~~~~~~~ 567 (600)
| ++|+++++..++... ..+++|||++++.+|++|+++.+.+... .+..........
T Consensus 159 h--------------------VdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~~ 218 (854)
T PRK05865 159 H--------------------SDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAE 218 (854)
T ss_pred e--------------------HHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHhhhhccCCchhhhhccchhh
Confidence 8 899999998887543 3467999999999999999999987542 111111111111
Q ss_pred C--CccccccChHHHHHHcCceeeEEEEe
Q psy16545 568 G--DIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 568 ~--~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
. ......+|++|++++|||+|+++++.
T Consensus 219 ~~~~~~~~~~D~sKar~~LGw~P~~sLee 247 (854)
T PRK05865 219 LELLHSAPLMDVTLLRDRWGFQPAWNAEE 247 (854)
T ss_pred hhcccCCccCCHHHHHHHhCCCCCCCHHH
Confidence 1 11244689999999999999999864
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.68 E-value=2e-16 Score=157.22 Aligned_cols=179 Identities=17% Similarity=0.198 Sum_probs=126.7
Q ss_pred CCCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc
Q psy16545 28 GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH 107 (600)
Q Consensus 28 ~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~ 107 (600)
..+++.+ .+|+..+..-.+ ++.|+.+. ..+|.|||+||.++. ...+......||.||..+++.|...
T Consensus 59 ~~ri~vv-----~gDl~e~~lGL~----~~~~~~La-~~vD~I~H~gA~Vn~---v~pYs~L~~~NVlGT~evlrLa~~g 125 (382)
T COG3320 59 ADRVEVV-----AGDLAEPDLGLS----ERTWQELA-ENVDLIIHNAALVNH---VFPYSELRGANVLGTAEVLRLAATG 125 (382)
T ss_pred cceEEEE-----ecccccccCCCC----HHHHHHHh-hhcceEEecchhhcc---cCcHHHhcCcchHhHHHHHHHHhcC
Confidence 3467777 777775543333 23344444 369999999999864 3556778999999999999999998
Q ss_pred CCCeEEEecCccccCCCCC--CCCCCC--CCCC----CCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCC
Q psy16545 108 GVYQLVFSSSCTVYGEPQF--LPITED--HPTG----NIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPS 179 (600)
Q Consensus 108 ~~~r~I~~SS~~vyg~~~~--~~~~E~--~~~~----~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~ 179 (600)
..|.++|+||.+++..... ...+++ .+.. .+.++|++||+.+|.+++++..+ |++++|+|||+|.|++.+
T Consensus 126 k~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r--GLpv~I~Rpg~I~gds~t 203 (382)
T COG3320 126 KPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR--GLPVTIFRPGYITGDSRT 203 (382)
T ss_pred CCceeEEEeeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc--CCCeEEEecCeeeccCcc
Confidence 8888999999999764321 112222 2221 45689999999999999999887 899999999999999987
Q ss_pred CCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccc
Q psy16545 180 GRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFV 231 (600)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~ 231 (600)
+.+... -++.++...+...+ ++-+.....+++.++.+++...
T Consensus 204 G~~n~~------D~~~Rlv~~~~~lg----~~P~~~~~~~~~p~~~v~~~v~ 245 (382)
T COG3320 204 GALNTR------DFLTRLVLGLLQLG----IAPDSEYSLDMLPVDHVARAVV 245 (382)
T ss_pred Cccccc------hHHHHHHHHHHHhC----CCCCcccchhhCccceeeEEee
Confidence 666433 24555555555222 2345556677777776665443
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.1e-15 Score=163.53 Aligned_cols=341 Identities=13% Similarity=0.050 Sum_probs=205.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||+++.+|..+++... ..+.+++.++|+ .+|+++++++.+++++ +.+. .++|
T Consensus 9 lITGas~gIG~aia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g~iD 81 (520)
T PRK06484 9 LVTGAAGGIGRAACQRFA--RAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQ-----LHREFGRID 81 (520)
T ss_pred EEECCCcHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHH-----HHHHhCCCC
Confidence 489999999999865322 222233323221 6899999988886554 4333 2599
Q ss_pred EEEEcCcccCc------ccCCCChhhhHHhHHHHHHHHHHHHHHc----CCC-eEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAV------GESMQEPLMYYKNNLIATINLLEVMKSH----GVY-QLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 69 ~Vih~A~~~~~------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~-r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|||||.... ....+++...+++|+.++..+++++... +-. ++|++||...... . .
T Consensus 82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~-----------~-~ 149 (520)
T PRK06484 82 VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVA-----------L-P 149 (520)
T ss_pred EEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCC-----------C-C
Confidence 99999997421 1223456779999999999999887543 333 8999999754321 1 3
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCCCCCCCCCCC--------------CCcccchhHHHHHhh
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAHPSGRIGEDP--------------TKSFTNIMPYLAQVA 201 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~--------------~~~~~~~~~~~~~~~ 201 (600)
..+.|+.+|.+.+.+++.++.++ .+++++.++||.+-.+.......... -+....+...+...+
T Consensus 150 ~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~ 229 (520)
T PRK06484 150 KRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLA 229 (520)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 45789999999999999998875 37999999999887764221110000 000111222222222
Q ss_pred cC-----CCCeEEEecCCcccccC-----cceEEee---ec---cccc------------c-ccC-------CCcccHHH
Q psy16545 202 IG-----SKPHFTVFGADYETEDG-----TGKVVAI---DN---FVNS------------V-HIG-------DTPCSIRA 245 (600)
Q Consensus 202 ~~-----~~~~~~v~g~g~~~~~~-----~~v~d~v---~~---~~~a------------~-~~g-------~~~~~l~~ 245 (600)
.. .+..+.+ ..|...... ....+-. +. ++.. + ..| .....+..
T Consensus 230 ~~~~~~~~G~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~ 308 (520)
T PRK06484 230 SDQASYITGSTLVV-DGGWTVYGGSGPASTAQAPSPLAESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKK 308 (520)
T ss_pred CccccCccCceEEe-cCCeeccccccCCCCccCCCCcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 11 1122222 111110000 0000000 00 0000 0 000 00112223
Q ss_pred HHhhhCCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCc-----cccccChHHHHHHHHHHHHHHHHHHHH
Q psy16545 246 IEQFTGKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMKS 315 (600)
Q Consensus 246 ~~~l~~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~ 315 (600)
+.+..+..+..+.+|+++++++.++++. ..+|++||+|+.... ..+.++....+++|+.++.++++++..
T Consensus 309 ~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 388 (520)
T PRK06484 309 LAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAAR 388 (520)
T ss_pred HHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 3333345667889999999988887764 258999999987421 112334567789999999999998876
Q ss_pred c--CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 316 H--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 316 ~--~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
. +-.++|++||.+.+... +....|+.+| ...+.+++.++.+. ++++..+.|+.
T Consensus 389 ~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asK---aal~~l~~~la~e~~~~gI~vn~v~PG~ 446 (520)
T PRK06484 389 LMSQGGVIVNLGSIASLLAL------------PPRNAYCASK---AAVTMLSRSLACEWAPAGIRVNTVAPGY 446 (520)
T ss_pred HhccCCEEEEECchhhcCCC------------CCCchhHHHH---HHHHHHHHHHHHHhhhhCeEEEEEEeCC
Confidence 4 23699999997654321 2236899999 66788888877653 67777777654
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-16 Score=151.13 Aligned_cols=182 Identities=17% Similarity=0.159 Sum_probs=157.9
Q ss_pred ccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCC-
Q psy16545 31 VPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV- 109 (600)
Q Consensus 31 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~- 109 (600)
++++ .+|++|...+.+ +++..+||.|+|+||......+++.|....+++..||.+|+++.+..+.
T Consensus 57 l~l~-----~gDLtD~~~l~r---------~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~ 122 (345)
T COG1089 57 LHLH-----YGDLTDSSNLLR---------ILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEK 122 (345)
T ss_pred eEEE-----eccccchHHHHH---------HHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCc
Confidence 5666 899999999999 7777789999999999999999999999999999999999999998753
Q ss_pred -CeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCC
Q psy16545 110 -YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTK 188 (600)
Q Consensus 110 -~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~ 188 (600)
.||...||+..||..+..|.+|++|. .|.|||+.+|+.+-+++..+...+ |+-.+.=..+|-=+|...-.|
T Consensus 123 ~~rfYQAStSE~fG~v~~~pq~E~TPF-yPrSPYAvAKlYa~W~tvNYResY-gl~AcnGILFNHESP~Rge~F------ 194 (345)
T COG1089 123 KTRFYQASTSELYGLVQEIPQKETTPF-YPRSPYAVAKLYAYWITVNYRESY-GLFACNGILFNHESPLRGETF------ 194 (345)
T ss_pred ccEEEecccHHhhcCcccCccccCCCC-CCCCHHHHHHHHHHheeeehHhhc-CceeecceeecCCCCCCccce------
Confidence 48999999999999999999999999 999999999999999999998887 888888788888888543322
Q ss_pred cccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccccc
Q psy16545 189 SFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVH 235 (600)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a~~ 235 (600)
+..++...+++...|....+. .|+=...|||-|..|++++++..++
T Consensus 195 VTRKIt~ava~Ik~G~q~~l~-lGNldAkRDWG~A~DYVe~mwlmLQ 240 (345)
T COG1089 195 VTRKITRAVARIKLGLQDKLY-LGNLDAKRDWGHAKDYVEAMWLMLQ 240 (345)
T ss_pred ehHHHHHHHHHHHccccceEE-eccccccccccchHHHHHHHHHHHc
Confidence 445666677787787777766 5999999999999999998887654
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.8e-16 Score=159.36 Aligned_cols=202 Identities=13% Similarity=0.012 Sum_probs=132.3
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccccccccChH--HhhhHHhhhhcccccccCCCCEEEEcCcccCcccCC--C
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMY--ANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESM--Q 84 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~Dl~~~~--~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~--~ 84 (600)
|||++|++|+++.+.. ...+.++++++|+........ .+..... ......+. ++|+||||||.......+ .
T Consensus 3 VtGatG~iG~~l~~~L--~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~D~Vvh~a~~~~~~~~~~~~ 77 (292)
T TIGR01777 3 ITGGTGFIGRALTQRL--TKDGHEVTILTRSPPAGANTKWEGYKPWAP-LAESEALE--GADAVINLAGEPIADKRWTEE 77 (292)
T ss_pred EEcccchhhHHHHHHH--HHcCCEEEEEeCCCCCCCcccceeeecccc-cchhhhcC--CCCEEEECCCCCcccccCCHH
Confidence 7999999999996643 334456666666543221100 0000000 00001333 799999999975432212 2
Q ss_pred ChhhhHHhHHHHHHHHHHHHHHcCCC--eEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCC
Q psy16545 85 EPLMYYKNNLIATINLLEVMKSHGVY--QLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKE 162 (600)
Q Consensus 85 ~~~~~~~~Nv~gt~~ll~a~~~~~~~--r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~ 162 (600)
.+...+++|+.++.+|+++|++.+++ ++|+.||.++||.....+++|+.+. .+.+.|+..+...|..+..+. +. +
T Consensus 78 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~-~~~~~~~~~~~~~e~~~~~~~-~~-~ 154 (292)
T TIGR01777 78 RKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSP-AGDDFLAELCRDWEEAAQAAE-DL-G 154 (292)
T ss_pred HHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCC-CCCChHHHHHHHHHHHhhhch-hc-C
Confidence 44568899999999999999999863 5666677778987666788999866 676777877877777766443 33 8
Q ss_pred ceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhc-CCCCeEEEecCCcccccCcceEEeeecccccc
Q psy16545 163 WNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAI-GSKPHFTVFGADYETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 163 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a~ 234 (600)
++++++||+++|||... .++.+..... ..+. + +|+|.+.|+++|++|+++.+..++
T Consensus 155 ~~~~ilR~~~v~G~~~~-------------~~~~~~~~~~~~~~~--~-~g~~~~~~~~i~v~Dva~~i~~~l 211 (292)
T TIGR01777 155 TRVVLLRTGIVLGPKGG-------------ALAKMLPPFRLGLGG--P-LGSGRQWFSWIHIEDLVQLILFAL 211 (292)
T ss_pred CceEEEeeeeEECCCcc-------------hhHHHHHHHhcCccc--c-cCCCCcccccEeHHHHHHHHHHHh
Confidence 99999999999999521 2222222111 1111 2 588999999999999998766553
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.9e-15 Score=150.59 Aligned_cols=213 Identities=10% Similarity=0.055 Sum_probs=148.2
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.|++++.++++ ++|+|||+++.. ..++....+.|+.++.+++++|++.+++||||+||...+.
T Consensus 43 ~~v~~v~~Dl~d~~~l~~al~--g~d~Vi~~~~~~-----~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~ 115 (317)
T CHL00194 43 WGAELVYGDLSLPETLPPSFK--GVTAIIDASTSR-----PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ 115 (317)
T ss_pred cCCEEEECCCCCHHHHHHHHC--CCCEEEECCCCC-----CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc
Confidence 468999999999999999998 899999997532 2345567889999999999999999999999999954321
Q ss_pred CCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCCCCcceE
Q psy16545 332 EPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKPVPYI 411 (600)
Q Consensus 332 ~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 411 (600)
. + .++|..+| ..+|.+++ ..+++++++||+.+.. .++..+
T Consensus 116 ~-------------~-~~~~~~~K---~~~e~~l~----~~~l~~tilRp~~~~~-------~~~~~~------------ 155 (317)
T CHL00194 116 Y-------------P-YIPLMKLK---SDIEQKLK----KSGIPYTIFRLAGFFQ-------GLISQY------------ 155 (317)
T ss_pred c-------------C-CChHHHHH---HHHHHHHH----HcCCCeEEEeecHHhh-------hhhhhh------------
Confidence 0 1 14577788 66777664 4689999999875310 000000
Q ss_pred EeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhh
Q psy16545 412 FYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFE 491 (600)
Q Consensus 412 ~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi 491 (600)
..|. +.+.+..+ ..+++. ++|+
T Consensus 156 -------------------------~~~~----------------------~~~~~~~~-----~~~~~~------~~~i 177 (317)
T CHL00194 156 -------------------------AIPI----------------------LEKQPIWI-----TNESTP------ISYI 177 (317)
T ss_pred -------------------------hhhh----------------------ccCCceEe-----cCCCCc------cCcc
Confidence 0000 00222211 112222 6777
Q ss_pred hhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC-CceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCCCC--
Q psy16545 492 RVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP-VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREG-- 568 (600)
Q Consensus 492 ~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~-~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~-- 568 (600)
| ++|+++++..++..+ ..+++||+++++.+|++|+++.+++.+|.+..+...|....
T Consensus 178 ~--------------------v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~ 237 (317)
T CHL00194 178 D--------------------TQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKL 237 (317)
T ss_pred C--------------------HHHHHHHHHHHhcCccccCcEEEecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHH
Confidence 7 899999999888754 45899999999999999999999999998655554442100
Q ss_pred ---------------C---------c-cccccChHHHHHHcCceee
Q psy16545 569 ---------------D---------I-VSMYANTDLAQRELGWSAR 589 (600)
Q Consensus 569 ---------------~---------~-~~~~~d~~k~~~~lG~~p~ 589 (600)
. . ....++.+++++.||+.|.
T Consensus 238 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~ 283 (317)
T CHL00194 238 LRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPN 283 (317)
T ss_pred HHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChh
Confidence 0 0 1223567899999999984
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.3e-15 Score=160.37 Aligned_cols=174 Identities=17% Similarity=0.093 Sum_probs=125.4
Q ss_pred cCC----CCcchHHHHHHHhhhccCCCccEEeccccc--------------------------ccccChHHhhhHHhhhh
Q psy16545 8 LGT----GQGTSVLQLLRTFERVTGKPVPYIVEARRE--------------------------GDIVSMYANTDLAQKEL 57 (600)
Q Consensus 8 ~vt----G~~g~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------------~Dl~~~~~~~~~~~~~~ 57 (600)
.|| |++|++|+++.+. +...+.++++++|.. +|+.| +.+
T Consensus 56 LVt~~~~GatG~iG~~lv~~--L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~------ 124 (378)
T PLN00016 56 LIVNTNSGGHAFIGFYLAKE--LVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKS------ 124 (378)
T ss_pred EEEeccCCCceeEhHHHHHH--HHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHh------
Confidence 477 9999999999653 333344444444442 22222 223
Q ss_pred cccccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 58 GWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 58 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++...++|+|||+++. +..++.+|+++|++.++++||++||.++|+.....+..|+++. .
T Consensus 125 ---~~~~~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~-~ 184 (378)
T PLN00016 125 ---KVAGAGFDVVYDNNGK----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAV-K 184 (378)
T ss_pred ---hhccCCccEEEeCCCC----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcC-C
Confidence 3433479999999653 1346889999999999999999999999997665677888777 5
Q ss_pred CCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCccc
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYET 217 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~ 217 (600)
|.+ +|..+|++++. . +++++++||+++|||... ..+...+...+. .++++++.|+|.+.
T Consensus 185 p~~----sK~~~E~~l~~----~-~l~~~ilRp~~vyG~~~~-----------~~~~~~~~~~~~-~~~~i~~~g~g~~~ 243 (378)
T PLN00016 185 PKA----GHLEVEAYLQK----L-GVNWTSFRPQYIYGPGNN-----------KDCEEWFFDRLV-RGRPVPIPGSGIQL 243 (378)
T ss_pred Ccc----hHHHHHHHHHH----c-CCCeEEEeceeEECCCCC-----------CchHHHHHHHHH-cCCceeecCCCCee
Confidence 544 79999988754 2 899999999999999632 123444444343 44678888999999
Q ss_pred ccCcceEEeeeccccc
Q psy16545 218 EDGTGKVVAIDNFVNS 233 (600)
Q Consensus 218 ~~~~~v~d~v~~~~~a 233 (600)
++++|++|+++.+..+
T Consensus 244 ~~~i~v~Dva~ai~~~ 259 (378)
T PLN00016 244 TQLGHVKDLASMFALV 259 (378)
T ss_pred eceecHHHHHHHHHHH
Confidence 9999999988876655
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.7e-14 Score=163.34 Aligned_cols=209 Identities=19% Similarity=0.218 Sum_probs=142.2
Q ss_pred CceeEEEeecCCh------hhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Q psy16545 252 KKVDFYSCDLVDK------NRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSS 325 (600)
Q Consensus 252 ~~v~~i~~Dl~~~------~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~S 325 (600)
.+++++.+|+.++ ..+..+ . ++|+|||+|+..... ..+....+.|+.++.+++++|++.++++|||+|
T Consensus 51 ~~v~~~~~Dl~~~~~~~~~~~~~~l-~--~~D~Vih~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~S 124 (657)
T PRK07201 51 DRVVPLVGDLTEPGLGLSEADIAEL-G--DIDHVVHLAAIYDLT---ADEEAQRAANVDGTRNVVELAERLQAATFHHVS 124 (657)
T ss_pred CcEEEEecccCCccCCcCHHHHHHh-c--CCCEEEECceeecCC---CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEe
Confidence 4689999999984 344443 4 899999999975432 345678899999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCCCCC--CCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHH
Q psy16545 326 SCTVYGEPQFLPITEDHPTG--NIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERV 402 (600)
Q Consensus 326 S~~vYg~~~~~~~~E~~~~~--~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~ 402 (600)
|.++||.... +.+|+.... +..+.|+.+| ..+|.+++. ..+++++++||++ +|++.......+
T Consensus 125 S~~v~g~~~~-~~~e~~~~~~~~~~~~Y~~sK---~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~------- 190 (657)
T PRK07201 125 SIAVAGDYEG-VFREDDFDEGQGLPTPYHRTK---FEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKI------- 190 (657)
T ss_pred ccccccCccC-ccccccchhhcCCCCchHHHH---HHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccC-------
Confidence 9999986533 345554221 1236899999 778988874 3589999999987 554321110000
Q ss_pred hCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhC--CCCceeeccCCCCCc
Q psy16545 403 TGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTG--KPVPYIFYNLGTGQG 480 (600)
Q Consensus 403 ~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~ 480 (600)
.+ ...+...+..... ...++ .+.+.+
T Consensus 191 ------------~~------------------------------------~~~~~~~~~~~~~~~~~~~~----~~~~~~ 218 (657)
T PRK07201 191 ------------DG------------------------------------PYYFFKVLAKLAKLPSWLPM----VGPDGG 218 (657)
T ss_pred ------------Cc------------------------------------HHHHHHHHHHhccCCccccc----ccCCCC
Confidence 00 0001111111101 11111 011222
Q ss_pred ccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC-CceeEeEcCCCCCccHHHHHHHHhhhcCCcc
Q psy16545 481 TSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP-VPYIFYNLGTGQGTSVLQLLRTFERVTGKPV 558 (600)
Q Consensus 481 ~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~-~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~ 558 (600)
. ++|+| ++|+++++..++..+ ..+++||+++++++|++|+++.+.+.+|.+.
T Consensus 219 ~------~~~v~--------------------vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~ 271 (657)
T PRK07201 219 R------TNIVP--------------------VDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPP 271 (657)
T ss_pred e------eeeee--------------------HHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCc
Confidence 2 56666 889999998887643 4578999999999999999999999999765
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.7e-15 Score=140.22 Aligned_cols=194 Identities=15% Similarity=0.092 Sum_probs=136.3
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccccc----ccc----ChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARREG----DIV----SMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVG 80 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~----Dl~----~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~ 80 (600)
|||+||++|++|..... ..+.++..+.|+.- ++. ..+.+.+ ... .++|+|||+||..-..
T Consensus 3 iTGgTGlIG~~L~~~L~--~~gh~v~iltR~~~~~~~~~~~~v~~~~~~~~---------~~~-~~~DavINLAG~~I~~ 70 (297)
T COG1090 3 ITGGTGLIGRALTARLR--KGGHQVTILTRRPPKASQNLHPNVTLWEGLAD---------ALT-LGIDAVINLAGEPIAE 70 (297)
T ss_pred EeccccchhHHHHHHHH--hCCCeEEEEEcCCcchhhhcCccccccchhhh---------ccc-CCCCEEEECCCCcccc
Confidence 79999999999965443 33344554455431 111 1122222 222 2699999999987433
Q ss_pred c--CCCChhhhHHhHHHHHHHHHHHHHH--cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q psy16545 81 E--SMQEPLMYYKNNLIATINLLEVMKS--HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDL 156 (600)
Q Consensus 81 ~--~~~~~~~~~~~Nv~gt~~ll~a~~~--~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~ 156 (600)
. +.+..+.++++.+..|..|.++..+ ...+.+|..|..+.||...+..++|+.++ ....-++.....|+..+.+
T Consensus 71 rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~--g~~Fla~lc~~WE~~a~~a 148 (297)
T COG1090 71 RRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPP--GDDFLAQLCQDWEEEALQA 148 (297)
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCC--CCChHHHHHHHHHHHHhhh
Confidence 3 3345667999999999999999875 45667888888889999888899999665 4454455555566666554
Q ss_pred HhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 157 SKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 157 ~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
.. .+.+++.+|.|.|.|+. .|....+.+.+...+-|+ +|+|.|+.+|+|++|+++.+..+
T Consensus 149 ~~--~gtRvvllRtGvVLs~~---------GGaL~~m~~~fk~glGG~------~GsGrQ~~SWIhieD~v~~I~fl 208 (297)
T COG1090 149 QQ--LGTRVVLLRTGVVLSPD---------GGALGKMLPLFKLGLGGK------LGSGRQWFSWIHIEDLVNAILFL 208 (297)
T ss_pred hh--cCceEEEEEEEEEecCC---------CcchhhhcchhhhccCCc------cCCCCceeeeeeHHHHHHHHHHH
Confidence 33 48999999999999985 234566777776655432 79999999999999988765544
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.2e-15 Score=153.16 Aligned_cols=153 Identities=18% Similarity=0.179 Sum_probs=108.3
Q ss_pred CCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCC----CCCCh
Q psy16545 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTG----NIKNV 141 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~----~p~s~ 141 (600)
++|+||||||..... .......+.|+.++.+++++|.+.++++||++||.++|+.....+..|+.+.. .+.+.
T Consensus 88 ~~d~vih~a~~~~~~---~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (367)
T TIGR01746 88 NVDTIVHNGALVNWV---YPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLAGG 164 (367)
T ss_pred hCCEEEeCCcEeccC---CcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccccCCC
Confidence 799999999987532 34566788999999999999999988889999999999764333333443220 23568
Q ss_pred HHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCc-ccccC
Q psy16545 142 YGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADY-ETEDG 220 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~-~~~~~ 220 (600)
|+.||+.+|.+++.+... +++++++|||.+||+...+.+.. ..++..+.......+ . +.++. ..+++
T Consensus 165 Y~~sK~~~E~~~~~~~~~--g~~~~i~Rpg~v~G~~~~g~~~~------~~~~~~~~~~~~~~~-~---~p~~~~~~~~~ 232 (367)
T TIGR01746 165 YAQSKWVAELLVREASDR--GLPVTIVRPGRILGNSYTGAINS------SDILWRMVKGCLALG-A---YPDSPELTEDL 232 (367)
T ss_pred hHHHHHHHHHHHHHHHhc--CCCEEEECCCceeecCCCCCCCc------hhHHHHHHHHHHHhC-C---CCCCCccccCc
Confidence 999999999999887654 89999999999999855433311 234444444333121 1 23333 35679
Q ss_pred cceEEeeeccccc
Q psy16545 221 TGKVVAIDNFVNS 233 (600)
Q Consensus 221 ~~v~d~v~~~~~a 233 (600)
++++|+++.+...
T Consensus 233 ~~vddva~ai~~~ 245 (367)
T TIGR01746 233 TPVDYVARAIVAL 245 (367)
T ss_pred ccHHHHHHHHHHH
Confidence 9999888766544
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1e-14 Score=149.82 Aligned_cols=171 Identities=12% Similarity=0.019 Sum_probs=122.8
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEEEc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHF 73 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~ 73 (600)
|||++|++|+++.+. +...+.++.+++|+ .+|+.|++++.+ +++ ++|+|||+
T Consensus 5 VtGatG~iG~~lv~~--Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~---------al~--g~d~Vi~~ 71 (317)
T CHL00194 5 VIGATGTLGRQIVRQ--ALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPP---------SFK--GVTAIIDA 71 (317)
T ss_pred EECCCcHHHHHHHHH--HHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHH---------HHC--CCCEEEEC
Confidence 799999999999553 22223333333332 678999988888 777 89999999
Q ss_pred CcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q psy16545 74 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEML 153 (600)
Q Consensus 74 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~ 153 (600)
++.. ..++..+.++|+.++.+++++|++.+++|||++||.+... .+.++|..+|..+|+++
T Consensus 72 ~~~~-----~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~--------------~~~~~~~~~K~~~e~~l 132 (317)
T CHL00194 72 STSR-----PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ--------------YPYIPLMKLKSDIEQKL 132 (317)
T ss_pred CCCC-----CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc--------------cCCChHHHHHHHHHHHH
Confidence 7643 1234557889999999999999999999999999954321 23367899999999987
Q ss_pred HHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhH-HHHHhhcCCCCeEEEecCCcccccCcceEEeeecccc
Q psy16545 154 KDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMP-YLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVN 232 (600)
Q Consensus 154 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~ 232 (600)
+. . +++++++||+.+|+.. +. .....+. ++++.+ +++.+.++++|++|+++.+..
T Consensus 133 ~~----~-~l~~tilRp~~~~~~~----------------~~~~~~~~~~--~~~~~~-~~~~~~~~~i~v~Dva~~~~~ 188 (317)
T CHL00194 133 KK----S-GIPYTIFRLAGFFQGL----------------ISQYAIPILE--KQPIWI-TNESTPISYIDTQDAAKFCLK 188 (317)
T ss_pred HH----c-CCCeEEEeecHHhhhh----------------hhhhhhhhcc--CCceEe-cCCCCccCccCHHHHHHHHHH
Confidence 54 2 8999999999887641 11 1112222 234444 557788899999999988876
Q ss_pred ccc
Q psy16545 233 SVH 235 (600)
Q Consensus 233 a~~ 235 (600)
++.
T Consensus 189 ~l~ 191 (317)
T CHL00194 189 SLS 191 (317)
T ss_pred Hhc
Confidence 653
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.57 E-value=9.2e-15 Score=153.78 Aligned_cols=172 Identities=14% Similarity=0.089 Sum_probs=126.4
Q ss_pred cCCCCcchHHHHHHHhhhccC--------------------------CCccEEecccccccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG--------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~--------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
.|||++|++|+.+.+.....+ .+++++ .+|++|++++.+ +
T Consensus 64 LVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v-----~~Dl~d~~~l~~---------~ 129 (390)
T PLN02657 64 LVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVV-----FGDVTDADSLRK---------V 129 (390)
T ss_pred EEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEE-----EeeCCCHHHHHH---------H
Confidence 589999999999965322111 134455 689999999888 5
Q ss_pred cccC--CCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 62 RCTH--DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 62 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
++.. ++|+||||++.... .....+++|+.++.+++++|++.++++||++||.++++ |.
T Consensus 130 ~~~~~~~~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~---------------p~ 189 (390)
T PLN02657 130 LFSEGDPVDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK---------------PL 189 (390)
T ss_pred HHHhCCCCcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC---------------cc
Confidence 4422 59999999885321 12345788999999999999999999999999987642 44
Q ss_pred ChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccc-
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETE- 218 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~- 218 (600)
..|..+|..+|+.++. .. .+++++++||+.+||+. . ..+ ..+. .++++.++|+|...|
T Consensus 190 ~~~~~sK~~~E~~l~~--~~-~gl~~tIlRp~~~~~~~-------------~---~~~-~~~~-~g~~~~~~GdG~~~~~ 248 (390)
T PLN02657 190 LEFQRAKLKFEAELQA--LD-SDFTYSIVRPTAFFKSL-------------G---GQV-EIVK-DGGPYVMFGDGKLCAC 248 (390)
T ss_pred hHHHHHHHHHHHHHHh--cc-CCCCEEEEccHHHhccc-------------H---HHH-Hhhc-cCCceEEecCCccccc
Confidence 6799999999998865 23 38999999999999752 1 122 2233 446777889998876
Q ss_pred cCcceEEeeecccccc
Q psy16545 219 DGTGKVVAIDNFVNSV 234 (600)
Q Consensus 219 ~~~~v~d~v~~~~~a~ 234 (600)
.++|++|+++.+..++
T Consensus 249 ~~I~v~DlA~~i~~~~ 264 (390)
T PLN02657 249 KPISEADLASFIADCV 264 (390)
T ss_pred CceeHHHHHHHHHHHH
Confidence 5799999877665543
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.2e-13 Score=139.84 Aligned_cols=126 Identities=17% Similarity=0.170 Sum_probs=95.3
Q ss_pred CceeEEEeecCCh------hhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Q psy16545 252 KKVDFYSCDLVDK------NRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSS 325 (600)
Q Consensus 252 ~~v~~i~~Dl~~~------~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~S 325 (600)
.+++++.+|++++ ..+..+.. ++|+|||+|+.... ........+.|+.++.+++++|.+.++++|||+|
T Consensus 61 ~~v~~~~~D~~~~~~gl~~~~~~~~~~--~~d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iS 135 (367)
T TIGR01746 61 ERIEVVAGDLSEPRLGLSDAEWERLAE--NVDTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASGRAKPLHYVS 135 (367)
T ss_pred CCEEEEeCCcCcccCCcCHHHHHHHHh--hCCEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEc
Confidence 4688999998764 34555554 79999999997542 2234567789999999999999999998999999
Q ss_pred CcccccCCCCCCCCCCCCCCC----CCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCC
Q psy16545 326 SCTVYGEPQFLPITEDHPTGN----IKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGT 386 (600)
Q Consensus 326 S~~vYg~~~~~~~~E~~~~~~----~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~ 386 (600)
|.++|+.....+..|+.+..+ ..+.|+.+| ..+|.+++.+.+. +++++++||+. +|+
T Consensus 136 S~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK---~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~ 197 (367)
T TIGR01746 136 TISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSK---WVAELLVREASDR-GLPVTIVRPGRILGN 197 (367)
T ss_pred cccccCCcCCCCccccccccccccccCCChHHHH---HHHHHHHHHHHhc-CCCEEEECCCceeec
Confidence 999998654333444443221 236799999 7789999887654 99999999987 443
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.5e-13 Score=144.65 Aligned_cols=193 Identities=13% Similarity=0.048 Sum_probs=137.3
Q ss_pred CceeEEEeecCChhhHHHHhhcC--CccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH--DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 329 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~--~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~v 329 (600)
.+++++.+|++|++.+.++++.. ++|+|||+++.... .....++.|+.++.+++++|++.+++|||++||.++
T Consensus 111 ~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v 185 (390)
T PLN02657 111 PGAEVVFGDVTDADSLRKVLFSEGDPVDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICV 185 (390)
T ss_pred CCceEEEeeCCCHHHHHHHHHHhCCCCcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccc
Confidence 46899999999999999998854 58999999874321 122456789999999999999999999999999887
Q ss_pred ccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCCCCcc
Q psy16545 330 YGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKPVP 409 (600)
Q Consensus 330 Yg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~ 409 (600)
|+ | ...|..+| ...|..++. ...+++++++||+.+..
T Consensus 186 ~~--------------p-~~~~~~sK---~~~E~~l~~--~~~gl~~tIlRp~~~~~----------------------- 222 (390)
T PLN02657 186 QK--------------P-LLEFQRAK---LKFEAELQA--LDSDFTYSIVRPTAFFK----------------------- 222 (390)
T ss_pred cC--------------c-chHHHHHH---HHHHHHHHh--ccCCCCEEEEccHHHhc-----------------------
Confidence 63 1 24577888 677877765 34789999999876411
Q ss_pred eEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhh-
Q psy16545 410 YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLR- 488 (600)
Q Consensus 410 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~- 488 (600)
+. ..++..+ ..+++..+ + |+|... +
T Consensus 223 -------~~-----------------------------------~~~~~~~--~~g~~~~~----~--GdG~~~----~~ 248 (390)
T PLN02657 223 -------SL-----------------------------------GGQVEIV--KDGGPYVM----F--GDGKLC----AC 248 (390)
T ss_pred -------cc-----------------------------------HHHHHhh--ccCCceEE----e--cCCccc----cc
Confidence 00 0000000 01333322 1 333321 3
Q ss_pred hhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC-CceeEeEcCCC-CCccHHHHHHHHhhhcCCcccccccCCC
Q psy16545 489 TFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP-VPYIFYNLGTG-QGTSVLQLLRTFERVTGKPVPYIVEARR 566 (600)
Q Consensus 489 ~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~-~~~~~~nl~~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~ 566 (600)
.++| ++|+++++..++..+ ..+++||++++ +.+|++|+++++.+.+|.++.+...|.+
T Consensus 249 ~~I~--------------------v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~ 308 (390)
T PLN02657 249 KPIS--------------------EADLASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQ 308 (390)
T ss_pred Ccee--------------------HHHHHHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHH
Confidence 3466 888888888887543 45789999985 6999999999999999987776666644
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.5e-13 Score=149.47 Aligned_cols=157 Identities=14% Similarity=0.069 Sum_probs=114.4
Q ss_pred CCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc-CCCeEEEecCccccCCCCCCCCCCCCCC---------
Q psy16545 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTVYGEPQFLPITEDHPT--------- 135 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~r~I~~SS~~vyg~~~~~~~~E~~~~--------- 135 (600)
++|+|||+||..... .++...+++|+.|+.+|+++|++. ++++||++||+++||... ..+.|...+
T Consensus 219 ~vDiVIH~AA~v~f~---~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~-G~i~E~~y~~~~~i~~~~ 294 (605)
T PLN02503 219 EVDVIINSAANTTFD---ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQ-GRIMEKPFRMGDCIAREL 294 (605)
T ss_pred cCCEEEECccccccc---cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCC-CeeeeeecCccccccccc
Confidence 699999999998642 567789999999999999999886 478999999999998653 122222110
Q ss_pred -------------------------------------------------CCCCChHHHHHHHHHHHHHHHHhhcCCceEE
Q psy16545 136 -------------------------------------------------GNIKNVYGKTKHFIEEMLKDLSKAHKEWNII 166 (600)
Q Consensus 136 -------------------------------------------------~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ 166 (600)
..-.+.|..||..+|++++.... +++++
T Consensus 295 ~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~~~~~---~LPv~ 371 (605)
T PLN02503 295 GISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVINSMRG---DIPVV 371 (605)
T ss_pred ccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHHHhcC---CCCEE
Confidence 01127799999999999986543 79999
Q ss_pred EEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 167 SLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 167 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
|+||+.|.+....+..|..+.- ..+.|.+.....| .--.+++++...-|.++|+.++++++.+
T Consensus 372 IvRPsiV~st~~eP~pGw~d~~--~~~~p~~~~~g~G--~lr~~~~~~~~~~DiVPVD~vvna~i~a 434 (605)
T PLN02503 372 IIRPSVIESTWKDPFPGWMEGN--RMMDPIVLYYGKG--QLTGFLADPNGVLDVVPADMVVNATLAA 434 (605)
T ss_pred EEcCCEecccccCCccccccCc--cccchhhhheecc--ceeEEEeCCCeeEeEEeecHHHHHHHHH
Confidence 9999999887766666555421 1234444333333 2223679999999999999888766644
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.5e-12 Score=141.52 Aligned_cols=197 Identities=21% Similarity=0.278 Sum_probs=133.6
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
..++++.+|+.++. +.+++. ++|+|||+|+.... . ....|+.++.|++++|++.++ |+||+||. ||
T Consensus 40 ~~ve~v~~Dl~d~~-l~~al~--~~D~VIHLAa~~~~-----~---~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G 105 (699)
T PRK12320 40 PRVDYVCASLRNPV-LQELAG--EADAVIHLAPVDTS-----A---PGGVGITGLAHVANAAARAGA-RLLFVSQA--AG 105 (699)
T ss_pred CCceEEEccCCCHH-HHHHhc--CCCEEEEcCccCcc-----c---hhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CC
Confidence 35789999999985 666666 78999999986321 1 125899999999999999997 79999985 44
Q ss_pred CCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcce
Q psy16545 332 EPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPY 410 (600)
Q Consensus 332 ~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~ 410 (600)
.. ..|. .+|.++.. ++++++++|+++ ||++.......+
T Consensus 106 ~~---------------~~~~-------~aE~ll~~----~~~p~~ILR~~nVYGp~~~~~~~r~--------------- 144 (699)
T PRK12320 106 RP---------------ELYR-------QAETLVST----GWAPSLVIRIAPPVGRQLDWMVCRT--------------- 144 (699)
T ss_pred CC---------------cccc-------HHHHHHHh----cCCCEEEEeCceecCCCCcccHhHH---------------
Confidence 21 1121 24665543 468999999887 554322111000
Q ss_pred EEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhh
Q psy16545 411 IFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF 490 (600)
Q Consensus 411 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f 490 (600)
+..++. ....++++. +
T Consensus 145 ------------------------------------------I~~~l~--~~~~~~pI~--------------------v 160 (699)
T PRK12320 145 ------------------------------------------VATLLR--SKVSARPIR--------------------V 160 (699)
T ss_pred ------------------------------------------HHHHHH--HHHcCCceE--------------------E
Confidence 011111 011133322 2
Q ss_pred hhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCCCCCc
Q psy16545 491 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDI 570 (600)
Q Consensus 491 i~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~ 570 (600)
+| |+|+++++..++.... .++||||+++.+|++|+++++..... . ..+....++
T Consensus 161 Iy--------------------VdDvv~alv~al~~~~-~GiyNIG~~~~~Si~el~~~i~~~~p-~----~~~~~~~~~ 214 (699)
T PRK12320 161 LH--------------------LDDLVRFLVLALNTDR-NGVVDLATPDTTNVVTAWRLLRSVDP-H----LRTRRVRSW 214 (699)
T ss_pred EE--------------------HHHHHHHHHHHHhCCC-CCEEEEeCCCeeEHHHHHHHHHHhCC-C----ccccccccH
Confidence 33 9999999999887643 45999999999999999999977632 1 112234566
Q ss_pred cccccChHHHHHHcCceeeEEEE
Q psy16545 571 VSMYANTDLAQRELGWSARCTVK 593 (600)
Q Consensus 571 ~~~~~d~~k~~~~lG~~p~~~l~ 593 (600)
.....|+.+++..++|.|+++++
T Consensus 215 ~~~~pdi~~a~~~~~w~~~~~~~ 237 (699)
T PRK12320 215 EQLIPEVDIAAVQEDWNFEFGWQ 237 (699)
T ss_pred HHhCCCCchhhhhcCCCCcchHH
Confidence 67788999999999999999875
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.4e-13 Score=150.51 Aligned_cols=155 Identities=22% Similarity=0.147 Sum_probs=113.3
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc------------cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAV 76 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~ 76 (600)
|||++|++|+++.+.. ...+.+++.+++. .+|+.|.+.+.+ +++ ++|+|||||+.
T Consensus 5 VTGATGfIGs~La~~L--l~~G~~Vv~l~R~~~~~~~~~v~~v~gDL~D~~~l~~---------al~--~vD~VVHlAa~ 71 (854)
T PRK05865 5 VTGASGVLGRGLTARL--LSQGHEVVGIARHRPDSWPSSADFIAADIRDATAVES---------AMT--GADVVAHCAWV 71 (854)
T ss_pred EECCCCHHHHHHHHHH--HHCcCEEEEEECCchhhcccCceEEEeeCCCHHHHHH---------HHh--CCCEEEECCCc
Confidence 7999999999996533 2223333333332 679999888887 666 79999999986
Q ss_pred cCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q psy16545 77 KAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDL 156 (600)
Q Consensus 77 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~ 156 (600)
... .+++|+.++.+++++|++.++++||++||.. |.++|++++.
T Consensus 72 ~~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~--------------------------K~aaE~ll~~- 115 (854)
T PRK05865 72 RGR---------NDHINIDGTANVLKAMAETGTGRIVFTSSGH--------------------------QPRVEQMLAD- 115 (854)
T ss_pred ccc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH--------------------------HHHHHHHHHH-
Confidence 431 5689999999999999999999999999841 8888887743
Q ss_pred HhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeecccccc
Q psy16545 157 SKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 157 ~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a~ 234 (600)
+ +++++++||+++|||.. ..+ +.+ +.. .++...|++.+.++|+|++|+++.+..++
T Consensus 116 ---~-gl~~vILRp~~VYGP~~------------~~~---i~~-ll~--~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL 171 (854)
T PRK05865 116 ---C-GLEWVAVRCALIFGRNV------------DNW---VQR-LFA--LPVLPAGYADRVVQVVHSDDAQRLLVRAL 171 (854)
T ss_pred ---c-CCCEEEEEeceEeCCCh------------HHH---HHH-Hhc--CceeccCCCCceEeeeeHHHHHHHHHHHH
Confidence 3 89999999999999941 112 222 111 12222355566779999999998887654
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.7e-13 Score=162.18 Aligned_cols=154 Identities=18% Similarity=0.127 Sum_probs=110.9
Q ss_pred CCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCC------------CCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQ------------FLPITEDH 133 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~------------~~~~~E~~ 133 (600)
++|+|||+||..+.. .....+...|+.|+.+++++|++.++++|+|+||.++|+... ...+.|+.
T Consensus 1061 ~~d~iiH~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~ 1137 (1389)
T TIGR03443 1061 EVDVIIHNGALVHWV---YPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESD 1137 (1389)
T ss_pred cCCEEEECCcEecCc---cCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccCCCCCccc
Confidence 799999999987532 234445568999999999999998889999999999996421 11234443
Q ss_pred CCC----CCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEE
Q psy16545 134 PTG----NIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFT 209 (600)
Q Consensus 134 ~~~----~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (600)
+.. .+.+.|+.||+.+|++++.+.+. +++++++|||+|||++..+.+. ...+++.+.+..... .
T Consensus 1138 ~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~--g~~~~i~Rpg~v~G~~~~g~~~------~~~~~~~~~~~~~~~----~ 1205 (1389)
T TIGR03443 1138 DLMGSSKGLGTGYGQSKWVAEYIIREAGKR--GLRGCIVRPGYVTGDSKTGATN------TDDFLLRMLKGCIQL----G 1205 (1389)
T ss_pred ccccccccCCCChHHHHHHHHHHHHHHHhC--CCCEEEECCCccccCCCcCCCC------chhHHHHHHHHHHHh----C
Confidence 210 24567999999999999887653 8999999999999997654331 133555555443211 1
Q ss_pred EecCCcccccCcceEEeeecccccc
Q psy16545 210 VFGADYETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 210 v~g~g~~~~~~~~v~d~v~~~~~a~ 234 (600)
.+.++.+.+++++++|+++.+...+
T Consensus 1206 ~~p~~~~~~~~~~Vddva~ai~~~~ 1230 (1389)
T TIGR03443 1206 LIPNINNTVNMVPVDHVARVVVAAA 1230 (1389)
T ss_pred CcCCCCCccccccHHHHHHHHHHHH
Confidence 2446667899999999988776553
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.7e-12 Score=139.81 Aligned_cols=122 Identities=15% Similarity=0.070 Sum_probs=94.3
Q ss_pred CceeEEEeecCCh------hhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEe
Q psy16545 252 KKVDFYSCDLVDK------NRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFS 324 (600)
Q Consensus 252 ~~v~~i~~Dl~~~------~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~r~v~~ 324 (600)
.++..+.+|+.++ +..+.+.+ ++|+|||+|+..... .++...++.|+.|+.+++++|++. +.++|||+
T Consensus 192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~~--~vDiVIH~AA~v~f~---~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~v 266 (605)
T PLN02503 192 SKLVPVVGNVCESNLGLEPDLADEIAK--EVDVIINSAANTTFD---ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQV 266 (605)
T ss_pred ccEEEEEeeCCCcccCCCHHHHHHHHh--cCCEEEECccccccc---cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEc
Confidence 4688999999987 34445554 699999999986532 467888999999999999999987 47899999
Q ss_pred cCcccccCCCCCCCCCCC----------------------------------------------------------CCCC
Q psy16545 325 SSCTVYGEPQFLPITEDH----------------------------------------------------------PTGN 346 (600)
Q Consensus 325 SS~~vYg~~~~~~~~E~~----------------------------------------------------------~~~~ 346 (600)
||..|||.... .+.|.. -..+
T Consensus 267 STayVyG~~~G-~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~ 345 (605)
T PLN02503 267 STAYVNGQRQG-RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYG 345 (605)
T ss_pred cCceeecCCCC-eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCC
Confidence 99999997531 112211 0123
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeeccc
Q psy16545 347 IKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL 384 (600)
Q Consensus 347 ~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~ 384 (600)
..+.|..|| ..+|.+++.+. .+++.+++||+.+
T Consensus 346 ~pNtYt~TK---~lAE~lV~~~~--~~LPv~IvRPsiV 378 (605)
T PLN02503 346 WQDTYVFTK---AMGEMVINSMR--GDIPVVIIRPSVI 378 (605)
T ss_pred CCChHHHHH---HHHHHHHHHhc--CCCCEEEEcCCEe
Confidence 348899999 88999999654 4899999999876
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.2e-12 Score=128.69 Aligned_cols=199 Identities=12% Similarity=-0.012 Sum_probs=126.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|..+.+... ..+.+++.++|+ .+|+++.+++.++++. +... .
T Consensus 11 lItGasg~iG~~la~~l~--~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~~ 83 (262)
T PRK13394 11 VVTGAASGIGKEIALELA--RAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDK-----VAERFG 83 (262)
T ss_pred EEECCCChHHHHHHHHHH--HCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHH-----HHHHcC
Confidence 589999999999855322 222222222221 6899999988875543 2221 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHH----HHHHHHHH-HHcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIA----TINLLEVM-KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~g----t~~ll~a~-~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.+|+||||||...... ..+.+...+++|+.+ +..+++++ ++.+.+++|++||...+. +.
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~-----------~~- 151 (262)
T PRK13394 84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE-----------AS- 151 (262)
T ss_pred CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC-----------CC-
Confidence 5899999999864322 223455678899999 55566666 666778999999964332 12
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGAD 214 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g 214 (600)
.+.+.|+.+|.+.+.+++.++.+. .+++++++|||.+++|.....+...... ........... +++.+
T Consensus 152 ~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~ 221 (262)
T PRK13394 152 PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKE-LGISEEEVVKK---------VMLGK 221 (262)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhc-cCCChHHHHHH---------HHhcC
Confidence 456789999999999999988764 3899999999999998532111000000 00000111111 12334
Q ss_pred cccccCcceEEeeeccccccc
Q psy16545 215 YETEDGTGKVVAIDNFVNSVH 235 (600)
Q Consensus 215 ~~~~~~~~v~d~v~~~~~a~~ 235 (600)
...+++++++|+++.+.....
T Consensus 222 ~~~~~~~~~~dva~a~~~l~~ 242 (262)
T PRK13394 222 TVDGVFTTVEDVAQTVLFLSS 242 (262)
T ss_pred CCCCCCCCHHHHHHHHHHHcC
Confidence 455679999998887665543
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.8e-12 Score=119.05 Aligned_cols=215 Identities=15% Similarity=0.159 Sum_probs=147.9
Q ss_pred CccEEEEcccccCccccc--cChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcc
Q psy16545 275 DIDCVIHFAAVKAVGESM--QEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNF 350 (600)
Q Consensus 275 ~~d~VihlAa~~~~~~~~--~~~~~~~~~Nv~gt~~ll~~~~~~--~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~ 350 (600)
++|+|||+|+..-....| .......+--+..|..|.++..+. +++.+|..|....||......++|+.|... ..
T Consensus 56 ~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~--~F 133 (297)
T COG1090 56 GIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGD--DF 133 (297)
T ss_pred CCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCC--Ch
Confidence 689999999987544434 334567777799999999998854 577899999999999999999999976543 22
Q ss_pred cccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHH
Q psy16545 351 YNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTF 430 (600)
Q Consensus 351 Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~ 430 (600)
- ++.+ ...|+...... ..|.+++.+|.+.+-..++..+..++..|..
T Consensus 134 l--a~lc-~~WE~~a~~a~-~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~----------------------------- 180 (297)
T COG1090 134 L--AQLC-QDWEEEALQAQ-QLGTRVVLLRTGVVLSPDGGALGKMLPLFKL----------------------------- 180 (297)
T ss_pred H--HHHH-HHHHHHHhhhh-hcCceEEEEEEEEEecCCCcchhhhcchhhh-----------------------------
Confidence 1 1222 44566555543 3489999999998544444433333322211
Q ss_pred HHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcc
Q psy16545 431 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQG 510 (600)
Q Consensus 431 ~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~ 510 (600)
.+|.++ |+|.|+ .+|||
T Consensus 181 --------------------------------glGG~~---------GsGrQ~----~SWIh------------------ 197 (297)
T COG1090 181 --------------------------------GLGGKL---------GSGRQW----FSWIH------------------ 197 (297)
T ss_pred --------------------------------ccCCcc---------CCCCce----eeeee------------------
Confidence 123332 555555 88999
Q ss_pred hhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccC----CCCCCcccccc-----ChHHHH
Q psy16545 511 TSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEA----RREGDIVSMYA-----NTDLAQ 581 (600)
Q Consensus 511 ~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~-----d~~k~~ 581 (600)
++|+++++..++++....+.||+.++.+++.+|+++.+.+.++++....... .-.++.....+ =.+|+.
T Consensus 198 --ieD~v~~I~fll~~~~lsGp~N~taP~PV~~~~F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~ 275 (297)
T COG1090 198 --IEDLVNAILFLLENEQLSGPFNLTAPNPVRNKEFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLE 275 (297)
T ss_pred --HHHHHHHHHHHHhCcCCCCcccccCCCcCcHHHHHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHH
Confidence 9999999999999877778999999999999999999999999653322111 11223222222 245666
Q ss_pred HHcCceeeE
Q psy16545 582 RELGWSARC 590 (600)
Q Consensus 582 ~~lG~~p~~ 590 (600)
+ .||+-++
T Consensus 276 ~-aGF~F~y 283 (297)
T COG1090 276 A-AGFQFQY 283 (297)
T ss_pred H-CCCeeec
Confidence 6 7888776
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.37 E-value=9.2e-12 Score=123.73 Aligned_cols=152 Identities=12% Similarity=0.001 Sum_probs=109.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d 68 (600)
-|||++|.+|+++++... ..+.+++.++++ .+|+++.+++.+++++ +.+.. .+|
T Consensus 14 lItG~sg~IG~~~a~~l~--~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~g~id 86 (255)
T PRK05717 14 LVTGAARGIGLGIAAWLI--AEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAE-----VLGQFGRLD 86 (255)
T ss_pred EEeCCcchHHHHHHHHHH--HcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHH-----HHHHhCCCC
Confidence 589999999999865332 222223322221 6899999888775544 43332 589
Q ss_pred EEEEcCcccCccc------CCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE------SMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 69 ~Vih~A~~~~~~~------~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
+||||||...... ..+++...+++|+.++.++++++.+. ...++|++||...+.. . ...
T Consensus 87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~-----------~-~~~ 154 (255)
T PRK05717 87 ALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQS-----------E-PDT 154 (255)
T ss_pred EEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCC-----------C-CCC
Confidence 9999999864321 22345679999999999999998642 2358999998754321 1 345
Q ss_pred ChHHHHHHHHHHHHHHHHhhc-CCceEEEEecccccCCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGAHP 178 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~~ 178 (600)
+.|+.||.+.+.+++.+++++ +++++++++||.+.++..
T Consensus 155 ~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~ 194 (255)
T PRK05717 155 EAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDP 194 (255)
T ss_pred cchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcc
Confidence 789999999999999998886 369999999999999753
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.7e-12 Score=126.26 Aligned_cols=144 Identities=17% Similarity=0.084 Sum_probs=106.2
Q ss_pred cCCCCcchHHHHHHHhhhccC---------------------CCccEEecccccccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG---------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~---------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
.|||++|++|+.+.+.....+ .++.++ .+|++|.+++.+++++ +++. .
T Consensus 6 lVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-----~~D~~~~~~~~~~~~~-----~~~~~~ 75 (276)
T PRK06482 6 FITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVL-----QLDVTDSAAVRAVVDR-----AFAALG 75 (276)
T ss_pred EEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEE-----EccCCCHHHHHHHHHH-----HHHHcC
Confidence 489999999999855321111 133444 7899999988875443 3322 2
Q ss_pred CCCEEEEcCcccCcccC----CCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|+||||||....... ..+....+++|+.++.++++++ ++.+.+++|++||..... +. +
T Consensus 76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~-~ 143 (276)
T PRK06482 76 RIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI-----------AY-P 143 (276)
T ss_pred CCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc-----------CC-C
Confidence 58999999998754322 2345568899999999999997 555678999999965321 12 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccc
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNP 173 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v 173 (600)
+.++|+.||++.|.+++.++++. .+++++++|||.+
T Consensus 144 ~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~ 181 (276)
T PRK06482 144 GFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPA 181 (276)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcc
Confidence 56899999999999999988763 3899999999988
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.5e-12 Score=131.72 Aligned_cols=182 Identities=13% Similarity=0.027 Sum_probs=122.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
.|||++|++|+++.+.. ...+.+++.+|++ .+|++|.+++.++++. +.+. .
T Consensus 10 lVtGasggIG~~la~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-----~~~~~g 82 (287)
T PRK06194 10 VITGAASGFGLAFARIG--AALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADA-----ALERFG 82 (287)
T ss_pred EEeCCccHHHHHHHHHH--HHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH-----HHHHcC
Confidence 58999999999996532 2222222222221 6899999888875443 2222 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCC------CeEEEecCccccCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGV------YQLVFSSSCTVYGEPQFLPITE 131 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~------~r~I~~SS~~vyg~~~~~~~~E 131 (600)
++|+||||||...... ..+++...+++|+.|+.++++++ .+.+. +++|++||...+..
T Consensus 83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------- 154 (287)
T PRK06194 83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLA-------- 154 (287)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC--------
Confidence 5899999999875422 22445667999999999988884 44433 58999999866542
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhhc----CCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCe
Q psy16545 132 DHPTGNIKNVYGKTKHFIEEMLKDLSKAH----KEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPH 207 (600)
Q Consensus 132 ~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (600)
. .+.++|+.||.+.+.+++.++.++ .++++..+.||.+..+. .+.. .+++
T Consensus 155 ---~-~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~--------------------~~~~--~~~~ 208 (287)
T PRK06194 155 ---P-PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI--------------------WQSE--RNRP 208 (287)
T ss_pred ---C-CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc--------------------cccc--ccCc
Confidence 1 355789999999999999988765 14666666665554331 1112 2235
Q ss_pred EEEecCCcccccCcceEEeeecc
Q psy16545 208 FTVFGADYETEDGTGKVVAIDNF 230 (600)
Q Consensus 208 ~~v~g~g~~~~~~~~v~d~v~~~ 230 (600)
..++++|.+.|++.++.|.++.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T PRK06194 209 ADLANTAPPTRSQLIAQAMSQKA 231 (287)
T ss_pred hhcccCccccchhhHHHHHHHhh
Confidence 56788999999999998877643
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.33 E-value=6.8e-12 Score=124.50 Aligned_cols=151 Identities=13% Similarity=0.059 Sum_probs=107.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|++|+.+.+... ..+.+++.++|+ .+|+.+.+++.+++++ +.+. .
T Consensus 5 lItGa~g~lG~~l~~~l~--~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 77 (255)
T TIGR01963 5 LVTGAASGIGLAIALALA--AAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAA-----AAAEFG 77 (255)
T ss_pred EEcCCcchHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH-----HHHhcC
Confidence 379999999999965322 122223222221 6899999887775443 2211 2
Q ss_pred CCCEEEEcCcccCcccC----CCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|+|||+|+....... ..+....+++|+.++..+++++ ++.+.+++|++||...+.. . .
T Consensus 78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~-----------~-~ 145 (255)
T TIGR01963 78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVA-----------S-P 145 (255)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCC-----------C-C
Confidence 58999999997643221 2234567889999999988887 4567789999999765432 1 3
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
..+.|+.+|.+.+.+++.++.+. .+++++++||+.+++|.
T Consensus 146 ~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~ 187 (255)
T TIGR01963 146 FKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPL 187 (255)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence 45789999999999998887653 38999999999999984
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.3e-11 Score=124.06 Aligned_cols=196 Identities=15% Similarity=0.051 Sum_probs=126.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||++|.+|+.+++... ..+.+++..+++ .+|++|.+++.+++++ +.+..
T Consensus 10 lVTGas~gIG~ala~~La--~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g 82 (275)
T PRK05876 10 VITGGASGIGLATGTEFA--RRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADE-----AFRLLG 82 (275)
T ss_pred EEeCCCchHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH-----HHHHcC
Confidence 489999999999855322 222222222211 6899999988885554 33222
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcC-CCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG-VYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.+|+||||||...... ..+++...+++|+.++.++++++. +.+ .+++|++||...+. +.
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~-----------~~- 150 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV-----------PN- 150 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc-----------CC-
Confidence 5899999999854322 223455688999999999999874 333 46899999986553 22
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGAD 214 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g 214 (600)
.+.+.|+.||.+.+.+.+.++.+. .++++++++||.+.++.... ....... ..+........+..
T Consensus 151 ~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~------------~~~~~~~-~~~~~~~~~~~~~~ 217 (275)
T PRK05876 151 AGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVAN------------SERIRGA-ACAQSSTTGSPGPL 217 (275)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccc------------hhhhcCc-cccccccccccccc
Confidence 567899999999888888777664 38999999999998874211 0000000 00011112223444
Q ss_pred cccccCcceEEeeeccccccc
Q psy16545 215 YETEDGTGKVVAIDNFVNSVH 235 (600)
Q Consensus 215 ~~~~~~~~v~d~v~~~~~a~~ 235 (600)
...+++++++|+++.+..++.
T Consensus 218 ~~~~~~~~~~dva~~~~~ai~ 238 (275)
T PRK05876 218 PLQDDNLGVDDIAQLTADAIL 238 (275)
T ss_pred cccccCCCHHHHHHHHHHHHH
Confidence 456678888888887766643
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.7e-11 Score=121.96 Aligned_cols=151 Identities=15% Similarity=0.056 Sum_probs=109.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d 68 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|++|.+++.++.++ +.+.. ++|
T Consensus 8 lVtGasggiG~~la~~l--~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~-----~~~~~~~~d 80 (277)
T PRK06180 8 LITGVSSGFGRALAQAA--LAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVAD-----AEATFGPID 80 (277)
T ss_pred EEecCCChHHHHHHHHH--HhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHH-----HHHHhCCCC
Confidence 58999999999996532 2223333333331 6799999888775443 33222 589
Q ss_pred EEEEcCcccCcccCC----CChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 69 ~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+||||||........ .+....+++|+.|+.++++++. +.+.+++|++||...+.. . ++.+
T Consensus 81 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~-----------~-~~~~ 148 (277)
T PRK06180 81 VLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLIT-----------M-PGIG 148 (277)
T ss_pred EEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCC-----------C-CCcc
Confidence 999999986432222 2345679999999999999853 445678999999754431 2 4668
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+|+.||.+.+.+++.++.+. .+++++++|||.+.++.
T Consensus 149 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~ 187 (277)
T PRK06180 149 YYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDW 187 (277)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCc
Confidence 99999999999999988764 38999999999998875
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.7e-11 Score=121.47 Aligned_cols=151 Identities=14% Similarity=0.140 Sum_probs=110.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------cccccChHHhhhHHhhhhccccccc-CCCCEEEEc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHF 73 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~ 73 (600)
-|||++|.+|+++.+... ..+.+++.++|+ .+|++|++++.+++++ +.+. ..+|+||||
T Consensus 8 lVtGasg~iG~~~a~~l~--~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-----~~~~~g~~d~li~~ 80 (270)
T PRK06179 8 LVTGASSGIGRATAEKLA--RAGYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDE-----VIARAGRIDVLVNN 80 (270)
T ss_pred EEecCCCHHHHHHHHHHH--HCCCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHH-----HHHhCCCCCEEEEC
Confidence 489999999999865322 222223333332 7899999998885544 3222 258999999
Q ss_pred CcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHH
Q psy16545 74 AAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKT 145 (600)
Q Consensus 74 A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~s 145 (600)
||...... ..++....+++|+.|+.++++++ ++.+.+++|++||...+.. . +..+.|+.|
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~-~~~~~Y~~s 148 (270)
T PRK06179 81 AGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP-----------A-PYMALYAAS 148 (270)
T ss_pred CCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC-----------C-CCccHHHHH
Confidence 99864322 22345678999999999999885 5567789999999754431 2 345789999
Q ss_pred HHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 146 KHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 146 K~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
|.+.+.+++.++.+. .++++++++||.+.++.
T Consensus 149 K~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~ 182 (270)
T PRK06179 149 KHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNF 182 (270)
T ss_pred HHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccc
Confidence 999999999887653 38999999999999874
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.9e-11 Score=121.80 Aligned_cols=149 Identities=12% Similarity=0.036 Sum_probs=107.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhccccccc-CC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCT-HD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~ 66 (600)
-|||++|.+|.++++.. ...+.+++.++|+ .+|+++.+++.+++++ +.+. .+
T Consensus 12 lVtGas~gIG~~la~~l--~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~ 84 (260)
T PRK12823 12 VVTGAAQGIGRGVALRA--AAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAA-----AVEAFGR 84 (260)
T ss_pred EEeCCCchHHHHHHHHH--HHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHH-----HHHHcCC
Confidence 58999999999996532 2223333333332 5799998887775554 3322 26
Q ss_pred CCEEEEcCcccCc-----ccCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 67 ~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
+|++|||||.... .....+....+++|+.++..+++++ ++.+.+++|++||...++ .
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------------~ 150 (260)
T PRK12823 85 IDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--------------I 150 (260)
T ss_pred CeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--------------C
Confidence 9999999985421 1123445668899999988776655 445667999999987654 2
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+..+|+.||.+.+.+++.++.++ .++++++++||.+++|.
T Consensus 151 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (260)
T PRK12823 151 NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPP 192 (260)
T ss_pred CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcc
Confidence 34689999999999999998775 38999999999999984
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.2e-11 Score=119.04 Aligned_cols=148 Identities=16% Similarity=0.035 Sum_probs=111.0
Q ss_pred cCCCCcchHHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
.|||++|.+|+.+.+.....+ .+++++ .+|+.+.+++.+++++ ..
T Consensus 10 lItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~D~~~~~~v~~~~~~-----~~ 79 (249)
T PRK12825 10 LVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAV-----QADVTDKAALEAAVAA-----AV 79 (249)
T ss_pred EEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEE-----ECCcCCHHHHHHHHHH-----HH
Confidence 589999999999965322111 124556 7999999988885443 21
Q ss_pred cc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCC
Q psy16545 63 CT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 63 ~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
+. .++|+|||+||...... ...++...+++|+.++.++++++ ++.+.+++|++||...+..
T Consensus 80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~---------- 149 (249)
T PRK12825 80 ERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPG---------- 149 (249)
T ss_pred HHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCC----------
Confidence 11 26899999999764432 23345678999999999999987 4557789999999876532
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.+|.+.+.+++.++++. .+++++++|||.++|+.
T Consensus 150 -~-~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~ 193 (249)
T PRK12825 150 -W-PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDM 193 (249)
T ss_pred -C-CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCc
Confidence 1 356789999999999998887763 38999999999999996
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.3e-11 Score=121.18 Aligned_cols=151 Identities=13% Similarity=0.068 Sum_probs=110.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||++|.+|+++.+.. ...+..++.++|+ .+|+++.+++.+++++ +.+. .++|
T Consensus 7 lItGasg~iG~~~a~~l--~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~~d 79 (275)
T PRK08263 7 FITGASRGFGRAWTEAA--LERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVET-----AVEHFGRLD 79 (275)
T ss_pred EEeCCCChHHHHHHHHH--HHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHH-----HHHHcCCCC
Confidence 48999999999996532 2223333333332 6899999888775443 2221 2689
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+||||||...... ..+++...+++|+.++..+++++ ++.+.+++|++||...+.. . ...+
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~-~~~~ 147 (275)
T PRK08263 80 IVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISA-----------F-PMSG 147 (275)
T ss_pred EEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCC-----------C-CCcc
Confidence 9999999864322 23456778999999998888876 4556779999999766542 1 3457
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.|+.||.+.+.+++.++.+. .|++++++|||.+..+.
T Consensus 148 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~ 186 (275)
T PRK08263 148 IYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDW 186 (275)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCc
Confidence 89999999999999988763 38999999999998775
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.4e-11 Score=124.05 Aligned_cols=162 Identities=15% Similarity=0.068 Sum_probs=109.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|..+.+... ..+.+++.++|+ .+|+++.+++.+++++ +.+. .
T Consensus 10 lVTGas~gIG~~~a~~L~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~-----~~~~~~ 82 (322)
T PRK07453 10 IITGASSGVGLYAAKALA--KRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDD-----FRALGK 82 (322)
T ss_pred EEEcCCChHHHHHHHHHH--HCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHH-----HHHhCC
Confidence 589999999998855322 122222222221 6899999998885544 2221 2
Q ss_pred CCCEEEEcCcccCcc-----cCCCChhhhHHhHHHHHHHHHHHHHH----cC--CCeEEEecCccccCCC-C---CCCC-
Q psy16545 66 DIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVMKS----HG--VYQLVFSSSCTVYGEP-Q---FLPI- 129 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~~r~I~~SS~~vyg~~-~---~~~~- 129 (600)
++|+||||||..... .+.++++..+++|+.|+.+|++++.. .+ ..|+|++||...+... . ..+.
T Consensus 83 ~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~ 162 (322)
T PRK07453 83 PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAP 162 (322)
T ss_pred CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCc
Confidence 599999999975321 12345677899999999999888754 22 2599999997654211 0 0000
Q ss_pred -------------------CCCCCCCCCCChHHHHHHHHHHHHHHHHhhc---CCceEEEEecccccCCC
Q psy16545 130 -------------------TEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH---KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 130 -------------------~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~~ 177 (600)
.+..+. .|.++|+.||++.+.+++.+++++ .++.++++|||+|++..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~ 231 (322)
T PRK07453 163 ADLGDLSGFEAGFKAPISMADGKKF-KPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP 231 (322)
T ss_pred cchhhhhcchhcccccccccCccCC-CccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence 112234 567899999999999999888775 27999999999998753
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.6e-11 Score=120.01 Aligned_cols=152 Identities=14% Similarity=-0.000 Sum_probs=110.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
.|||++|.+|+.+.+.. ...+.+++.++|+ .+|+.|.+++.+.++. +... .
T Consensus 10 lItGasg~iG~~l~~~l--~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~~ 82 (251)
T PRK12826 10 LVTGAARGIGRAIAVRL--AADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAA-----GVEDFG 82 (251)
T ss_pred EEcCCCCcHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH-----HHHHhC
Confidence 58999999999985532 2223333333332 6799999888884433 2111 2
Q ss_pred CCCEEEEcCcccCc----ccCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAV----GESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
.+|+|||+|+.... .....++...+++|+.++.++++++. +.+.++||++||...++. +. .
T Consensus 83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~----------~~-~ 151 (251)
T PRK12826 83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV----------GY-P 151 (251)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc----------CC-C
Confidence 58999999988754 22234556789999999999998874 456679999999865521 22 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+.|+.+|.+++.+++.++.+. .+++++++|||.++||.
T Consensus 152 ~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~ 193 (251)
T PRK12826 152 GLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPM 193 (251)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcch
Confidence 56789999999999999987653 38999999999999995
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.3e-11 Score=121.28 Aligned_cols=150 Identities=15% Similarity=0.105 Sum_probs=108.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhccccccc--CCCCEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCT--HDIDCV 70 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~--~~~d~V 70 (600)
-|||++|.+|+.+++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .++|+|
T Consensus 8 lItGasggiG~~la~~l--~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~~~~g~id~l 80 (277)
T PRK05993 8 LITGCSSGIGAYCARAL--QSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQ-----VLELSGGRLDAL 80 (277)
T ss_pred EEeCCCcHHHHHHHHHH--HHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHH-----HHHHcCCCccEE
Confidence 48999999999996532 2233344444432 5899999988885554 3322 258999
Q ss_pred EEcCcccCcccC----CCChhhhHHhHHHH----HHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChH
Q psy16545 71 IHFAAVKAVGES----MQEPLMYYKNNLIA----TINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVY 142 (600)
Q Consensus 71 ih~A~~~~~~~~----~~~~~~~~~~Nv~g----t~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y 142 (600)
|||||....... .++....+++|+.| +..++..+++.+.+++|++||...+. +. .+.+.|
T Consensus 81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~-----------~~-~~~~~Y 148 (277)
T PRK05993 81 FNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV-----------PM-KYRGAY 148 (277)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC-----------CC-CccchH
Confidence 999998644321 23345689999999 45556666777778999999964432 22 456899
Q ss_pred HHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 143 GKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 143 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+.||.+.+.+++.++.+. .|+++++++||.+-.+
T Consensus 149 ~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 149 NASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 999999999999887554 3899999999988766
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=6.8e-11 Score=121.34 Aligned_cols=162 Identities=17% Similarity=0.071 Sum_probs=110.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------cccccChHHhhhHHhhhhccccccc-CCCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------EGDIVSMYANTDLAQKELGWSARCT-HDIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~ 69 (600)
-|||++|.+|.++++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .++|+
T Consensus 30 lITGasggIG~~~a~~L--~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~-----~~~~~~~iD~ 102 (315)
T PRK06196 30 IVTGGYSGLGLETTRAL--AQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAER-----FLDSGRRIDI 102 (315)
T ss_pred EEeCCCchHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHH-----HHhcCCCCCE
Confidence 58999999999986532 2222233333322 6899999998886654 3322 36999
Q ss_pred EEEcCcccCccc--CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCC-CCCCCCCCCCCCCCCChH
Q psy16545 70 VIHFAAVKAVGE--SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEP-QFLPITEDHPTGNIKNVY 142 (600)
Q Consensus 70 Vih~A~~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~-~~~~~~E~~~~~~p~s~Y 142 (600)
||||||...... .....+..+++|+.++..+++++ ++.+..++|++||....... .........+. .+...|
T Consensus 103 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~-~~~~~Y 181 (315)
T PRK06196 103 LINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGY-DKWLAY 181 (315)
T ss_pred EEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCC-ChHHHH
Confidence 999999764321 23456778999999987777654 44455699999997543211 10011112233 456789
Q ss_pred HHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 143 GKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 143 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.||.+.+.+++.++.++ .+++++++|||.+.++.
T Consensus 182 ~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~ 218 (315)
T PRK06196 182 GQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPL 218 (315)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCc
Confidence 999999999998887764 38999999999999884
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.9e-11 Score=119.48 Aligned_cols=152 Identities=14% Similarity=0.070 Sum_probs=107.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|++|+++.+... ..+.+++.++|+ .+|+++.+++.++.++ +.+.
T Consensus 10 lItGa~g~iG~~l~~~l~--~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~ 82 (249)
T PRK09135 10 LITGGARRIGAAIARTLH--AAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAA-----CVAA 82 (249)
T ss_pred EEeCCCchHHHHHHHHHH--HCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHH-----HHHH
Confidence 489999999999865322 223333333321 5799998888774433 2111
Q ss_pred -CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+|||+||...... ...++...+++|+.++.++++++.+. ....++.+|+.. +..+.
T Consensus 83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~- 150 (249)
T PRK09135 83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH-----------AERPL- 150 (249)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh-----------hcCCC-
Confidence 25899999999753321 12345678999999999999998642 123566655522 23355
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc-CCceEEEEecccccCCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGAHP 178 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~~ 178 (600)
.+.++|+.||.++|.+++.++++. ++++++++|||.++||..
T Consensus 151 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~ 193 (249)
T PRK09135 151 KGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPED 193 (249)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccc
Confidence 678999999999999999998875 369999999999999963
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=6e-11 Score=116.13 Aligned_cols=150 Identities=13% Similarity=0.068 Sum_probs=111.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------cccccChHHhhhHHhhhhcccccccCCCCEEEEcCccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVK 77 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~ 77 (600)
.|||++|.+|+.+.+.. ...+.+++.++|+ .+|+++.+++.+++++ +.+..++|+|||+||..
T Consensus 7 lItG~s~~iG~~ia~~l--~~~G~~v~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~d~vi~~ag~~ 79 (234)
T PRK07577 7 LVTGATKGIGLALSLRL--ANLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQ-----INEIHPVDAIVNNVGIA 79 (234)
T ss_pred EEECCCCcHHHHHHHHH--HHCCCEEEEEeCCcccccCceEEEeeCCCHHHHHHHHHH-----HHHhCCCcEEEECCCCC
Confidence 48999999999996633 3333344433332 6799999888875554 44445789999999986
Q ss_pred Cccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q psy16545 78 AVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFI 149 (600)
Q Consensus 78 ~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~ 149 (600)
.... ...+....+++|+.++.++++++ ++.+.+++|++||...|+. ...++|+.||.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------------~~~~~Y~~sK~a~ 146 (234)
T PRK07577 80 LPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGA-------------LDRTSYSAAKSAL 146 (234)
T ss_pred CCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCC-------------CCchHHHHHHHHH
Confidence 5422 22445568899999998887775 4456679999999876653 3457899999999
Q ss_pred HHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 150 EEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 150 e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+++.++.+. .+++++++|||.+..+.
T Consensus 147 ~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 176 (234)
T PRK07577 147 VGCTRTWALELAEYGITVNAVAPGPIETEL 176 (234)
T ss_pred HHHHHHHHHHHHhhCcEEEEEecCcccCcc
Confidence 99999887654 38999999999998774
|
|
| >KOG2774|consensus | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.1e-11 Score=111.11 Aligned_cols=241 Identities=18% Similarity=0.208 Sum_probs=160.5
Q ss_pred eEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCC
Q psy16545 255 DFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQ 334 (600)
Q Consensus 255 ~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~ 334 (600)
.|+..|+.|...++++.-..++|.+||+.|..+ .-.+.+-....++|+.|..|+++.+++++. ++...||...+|...
T Consensus 90 PyIy~DILD~K~L~eIVVn~RIdWL~HfSALLS-AvGE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtS 167 (366)
T KOG2774|consen 90 PYIYLDILDQKSLEEIVVNKRIDWLVHFSALLS-AVGETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTS 167 (366)
T ss_pred CchhhhhhccccHHHhhcccccceeeeHHHHHH-HhcccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCC
Confidence 688899999999999988889999999998753 223445566788999999999999999986 777899999999764
Q ss_pred CCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc----cCCCCcchHHHHHHHHHHHhCCCCcce
Q psy16545 335 FLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN----LGTGQGTSVLQLLRTFERVTGNKPVPY 410 (600)
Q Consensus 335 ~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~----~g~~~~~~~~~~~~~~~~~~g~~~~~~ 410 (600)
...-+.+.....+...||.|| ..+|.+-+.+..++|+++..+|+.. -.||+|++-..+.
T Consensus 168 PRNPTPdltIQRPRTIYGVSK---VHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A-------------- 230 (366)
T KOG2774|consen 168 PRNPTPDLTIQRPRTIYGVSK---VHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIA-------------- 230 (366)
T ss_pred CCCCCCCeeeecCceeechhH---HHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHH--------------
Confidence 433333333333348999999 8899999999999999999999643 2223332211110
Q ss_pred EEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhh
Q psy16545 411 IFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF 490 (600)
Q Consensus 411 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f 490 (600)
.|..+.++ |+. .+|
T Consensus 231 ------------------~f~~Al~~----------------------------gk~--------------------tCy 244 (366)
T KOG2774|consen 231 ------------------IFYDALQK----------------------------GKH--------------------TCY 244 (366)
T ss_pred ------------------HHHHHHHc----------------------------CCc--------------------ccc
Confidence 01111000 110 011
Q ss_pred hhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC---CceeEeEcCCCCCccHHHHHHHHhhhcCC-cccccccCCC
Q psy16545 491 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP---VPYIFYNLGTGQGTSVLQLLRTFERVTGK-PVPYIVEARR 566 (600)
Q Consensus 491 i~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~---~~~~~~nl~~~~~~s~~e~~~~~~~~~g~-~~~~~~~~~~ 566 (600)
+..+ . +++.- ++.|+.+++...+..+ .+.++||+. +-+.|-+|++..+.+..+. .+........
T Consensus 245 lrpd-t-rlpmm---------y~~dc~~~~~~~~~a~~~~lkrr~ynvt-~~sftpee~~~~~~~~~p~~~i~y~~~srq 312 (366)
T KOG2774|consen 245 LRPD-T-RLPMM---------YDTDCMASVIQLLAADSQSLKRRTYNVT-GFSFTPEEIADAIRRVMPGFEIDYDICTRQ 312 (366)
T ss_pred cCCC-c-cCcee---------ehHHHHHHHHHHHhCCHHHhhhheeeec-eeccCHHHHHHHHHhhCCCceeecccchhh
Confidence 1100 0 01111 2788888888777554 358999996 7799999999999998862 3222222111
Q ss_pred -CCCccccccChHHHHHHcCceeeEEE
Q psy16545 567 -EGDIVSMYANTDLAQRELGWSARCTV 592 (600)
Q Consensus 567 -~~~~~~~~~d~~k~~~~lG~~p~~~l 592 (600)
..+.....+|-+.++++..|+.++.|
T Consensus 313 ~iad~wp~~~dds~ar~~wh~~h~~~l 339 (366)
T KOG2774|consen 313 SIADSWPMSLDDSEARTEWHEKHSLHL 339 (366)
T ss_pred hhhhhcccccCchhHhhHHHHhhhhhH
Confidence 22333456788899998888776654
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3e-11 Score=120.06 Aligned_cols=152 Identities=13% Similarity=-0.018 Sum_probs=105.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|.++.+... ..+.+++.++|+ .+|+.+++++.++++. +.+. .
T Consensus 8 lItG~sg~iG~~la~~l~--~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~~ 80 (258)
T PRK12429 8 LVTGAASGIGLEIALALA--KEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDY-----AVETFG 80 (258)
T ss_pred EEECCCchHHHHHHHHHH--HCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH-----HHHHcC
Confidence 489999999999855321 122222222221 7899999988774433 2211 2
Q ss_pred CCCEEEEcCcccCcccC----CCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
.+|+|||+||....... ..+....+++|+.++.++++.+ ++.+.++||++||...+.. . .
T Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~-~ 148 (258)
T PRK12429 81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG-----------S-A 148 (258)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----------C-C
Confidence 68999999997643221 2334457889999966666554 5567789999999754421 2 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAHP 178 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~ 178 (600)
+.+.|+.+|.+.+.+++.++.+. .+++++++|||.+++|..
T Consensus 149 ~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~ 191 (258)
T PRK12429 149 GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLV 191 (258)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhh
Confidence 56899999999999998887664 389999999999999853
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.2e-10 Score=139.20 Aligned_cols=125 Identities=18% Similarity=0.186 Sum_probs=92.4
Q ss_pred CceeEEEeecCCh------hhHHHHhhcCCccEEEEcccccCccccccChH-HHHHHHHHHHHHHHHHHHHcCCCEEEEe
Q psy16545 252 KKVDFYSCDLVDK------NRLGEIFAKHDIDCVIHFAAVKAVGESMQEPL-MYYKNNLIATINLLEVMKSHGVYQLVFS 324 (600)
Q Consensus 252 ~~v~~i~~Dl~~~------~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~-~~~~~Nv~gt~~ll~~~~~~~~~r~v~~ 324 (600)
.+++++.+|+.++ ..+.++.. ++|+|||+|+.... ..+. .....|+.|+.+++++|++.++++|+|+
T Consensus 1034 ~~i~~~~gDl~~~~lgl~~~~~~~l~~--~~d~iiH~Aa~~~~----~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~v 1107 (1389)
T TIGR03443 1034 SRIEVVLGDLSKEKFGLSDEKWSDLTN--EVDVIIHNGALVHW----VYPYSKLRDANVIGTINVLNLCAEGKAKQFSFV 1107 (1389)
T ss_pred cceEEEeccCCCccCCcCHHHHHHHHh--cCCEEEECCcEecC----ccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEE
Confidence 3688999999754 44555554 78999999997643 2333 3445799999999999999889999999
Q ss_pred cCcccccCCC------------CCCCCCCCCCCC----CCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCC
Q psy16545 325 SSCTVYGEPQ------------FLPITEDHPTGN----IKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGT 386 (600)
Q Consensus 325 SS~~vYg~~~------------~~~~~E~~~~~~----~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~ 386 (600)
||.++||... ...+.|+.+..+ ..+.|+.|| ..+|.+++.+.+. +++++++||++ +|+
T Consensus 1108 SS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK---~~aE~l~~~~~~~-g~~~~i~Rpg~v~G~ 1182 (1389)
T TIGR03443 1108 SSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSK---WVAEYIIREAGKR-GLRGCIVRPGYVTGD 1182 (1389)
T ss_pred eCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHH---HHHHHHHHHHHhC-CCCEEEECCCccccC
Confidence 9999997421 112344432211 235799999 8899999987764 99999999987 554
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1e-10 Score=115.58 Aligned_cols=152 Identities=13% Similarity=-0.016 Sum_probs=110.6
Q ss_pred ccCCCCcchHHHHHHHhhhccCCCccEEeccc-------------------------ccccccChHHhhhHHhhhhcccc
Q psy16545 7 NLGTGQGTSVLQLLRTFERVTGKPVPYIVEAR-------------------------REGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 7 ~~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~-------------------------~~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
--|||++|++|+.+++... ..+.+++.+++ ..+|+.+.+++.++.++ +
T Consensus 9 ilItGasg~iG~~la~~l~--~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~ 81 (249)
T PRK12827 9 VLITGGSGGLGRAIAVRLA--ADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDA-----G 81 (249)
T ss_pred EEEECCCChHHHHHHHHHH--HCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-----H
Confidence 3689999999999865322 22222222111 17899999888875443 3
Q ss_pred ccc-CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHH-----HcCCCeEEEecCccccCCCCCCCCCC
Q psy16545 62 RCT-HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK-----SHGVYQLVFSSSCTVYGEPQFLPITE 131 (600)
Q Consensus 62 ~~~-~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~-----~~~~~r~I~~SS~~vyg~~~~~~~~E 131 (600)
.+. .++|+|||+||..... ...+++...+++|+.++.++++++. +.+.+++|++||...+..
T Consensus 82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------- 153 (249)
T PRK12827 82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRG-------- 153 (249)
T ss_pred HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCC--------
Confidence 322 3699999999986521 1223456688999999999999987 456678999999765532
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 132 DHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 132 ~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+...|+.+|.+.+.+++.++.+. .+++++++|||.+.++.
T Consensus 154 ---~-~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~ 197 (249)
T PRK12827 154 ---N-RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPM 197 (249)
T ss_pred ---C-CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCc
Confidence 1 456789999999999999888764 38999999999999985
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=6.9e-11 Score=117.57 Aligned_cols=151 Identities=14% Similarity=0.074 Sum_probs=109.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+++++... ..+.+++.++|+ .+|+++.+++.++.++ +.+. .
T Consensus 9 lItGa~~~IG~~la~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g 81 (258)
T PRK07890 9 VVSGVGPGLGRTLAVRAA--RAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVAL-----ALERFG 81 (258)
T ss_pred EEECCCCcHHHHHHHHHH--HcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHH-----HHHHcC
Confidence 489999999999865322 222222222221 6899998888774443 3222 2
Q ss_pred CCCEEEEcCcccCc-----ccCCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|+|||+||.... ....+++...+++|+.++..+++++.+. ..+++|++||...+. +. .
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~-----------~~-~ 149 (258)
T PRK07890 82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH-----------SQ-P 149 (258)
T ss_pred CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc-----------CC-C
Confidence 58999999997532 1123456678999999999999998652 225899999975432 22 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+.|+.+|.+.+.+++.++.++ .+++++++|||.+++|.
T Consensus 150 ~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~ 191 (258)
T PRK07890 150 KYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDP 191 (258)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHH
Confidence 56789999999999999998764 38999999999999985
|
|
| >KOG1372|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=6.2e-12 Score=116.50 Aligned_cols=179 Identities=17% Similarity=0.180 Sum_probs=138.2
Q ss_pred cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCC---CeEEEec
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV---YQLVFSS 116 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~---~r~I~~S 116 (600)
-+|++|...+.+ ++...+++-|+|+|+......+++-++...++...||.+|++|.+..+. -||-..|
T Consensus 89 YgDmTDss~L~k---------~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAs 159 (376)
T KOG1372|consen 89 YGDMTDSSCLIK---------LISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQAS 159 (376)
T ss_pred eccccchHHHHH---------HHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecc
Confidence 589999999998 5665689999999999887778888888889999999999999987642 3899999
Q ss_pred CccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHH
Q psy16545 117 SCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPY 196 (600)
Q Consensus 117 S~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~ 196 (600)
|+..||..+..|..|.+|. .|.|||+.+|..+-+++-.+...+ ++-.+-=-+++--.|. -|++ -+...+...
T Consensus 160 tSElyGkv~e~PQsE~TPF-yPRSPYa~aKmy~~WivvNyREAY-nmfAcNGILFNHESPR----RGen--FVTRKItRs 231 (376)
T KOG1372|consen 160 TSELYGKVQEIPQSETTPF-YPRSPYAAAKMYGYWIVVNYREAY-NMFACNGILFNHESPR----RGEN--FVTRKITRS 231 (376)
T ss_pred cHhhcccccCCCcccCCCC-CCCChhHHhhhhheEEEEEhHHhh-cceeeccEeecCCCCc----cccc--hhhHHHHHH
Confidence 9999999888999999999 999999999998888776666555 3322221122333333 2222 123445556
Q ss_pred HHHhhcCCCCeEEEecCCcccccCcceEEeeecccccccc
Q psy16545 197 LAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVHI 236 (600)
Q Consensus 197 ~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a~~~ 236 (600)
+.+...|..+.+. .|+-...|||-|-.|++.+++..++.
T Consensus 232 vakI~~gqqe~~~-LGNL~a~RDWGhA~dYVEAMW~mLQ~ 270 (376)
T KOG1372|consen 232 VAKISLGQQEKIE-LGNLSALRDWGHAGDYVEAMWLMLQQ 270 (376)
T ss_pred HHHhhhcceeeEE-ecchhhhcccchhHHHHHHHHHHHhc
Confidence 6666777767776 59999999999999999998877553
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-10 Score=116.08 Aligned_cols=151 Identities=13% Similarity=0.023 Sum_probs=110.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
.|||++|.+|..+++.. ...+.+++..+|+ .+|++|.+++.+++++ +.+. .
T Consensus 14 lItGa~g~iG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 86 (255)
T PRK07523 14 LVTGSSQGIGYALAEGL--AQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDA-----FEAEIG 86 (255)
T ss_pred EEECCcchHHHHHHHHH--HHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHH-----HHHhcC
Confidence 58999999999996532 2233334433332 5699999888885543 2221 2
Q ss_pred CCCEEEEcCcccCcccC----CCChhhhHHhHHHHHHHHHHHHHHc----CCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMKSH----GVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
.+|+|||+||....... .++....+++|+.++.++++++.+. +.+++|++||..... +. .
T Consensus 87 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~-~ 154 (255)
T PRK07523 87 PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL-----------AR-P 154 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc-----------CC-C
Confidence 58999999998643221 2334668889999999999988653 567999999964322 22 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
..++|+.+|.+.+.+++.++.++ .+++++++|||.+.++.
T Consensus 155 ~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 196 (255)
T PRK07523 155 GIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPL 196 (255)
T ss_pred CCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCch
Confidence 56899999999999999998754 38999999999999985
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.23 E-value=1e-10 Score=117.49 Aligned_cols=151 Identities=16% Similarity=0.089 Sum_probs=106.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhccccccc-CCCCEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCT-HDIDCVI 71 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vi 71 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+. .++|+||
T Consensus 7 lItGasggiG~~la~~l~--~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~-----~~~~~~~id~li 79 (273)
T PRK06182 7 LVTGASSGIGKATARRLA--AQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDT-----IIAEEGRIDVLV 79 (273)
T ss_pred EEECCCChHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHH-----HHHhcCCCCEEE
Confidence 489999999999965322 222233322222 6899999998885554 3322 2699999
Q ss_pred EcCcccCccc----CCCChhhhHHhHHHHHHHHHH----HHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHH
Q psy16545 72 HFAAVKAVGE----SMQEPLMYYKNNLIATINLLE----VMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYG 143 (600)
Q Consensus 72 h~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~----a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~ 143 (600)
|+||...... ..++++..+++|+.++..+++ .+++.+.+++|++||..... +. +....|+
T Consensus 80 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~-----------~~-~~~~~Y~ 147 (273)
T PRK06182 80 NNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI-----------YT-PLGAWYH 147 (273)
T ss_pred ECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC-----------CC-CCccHhH
Confidence 9999864322 234567789999999655555 55666777999999964321 11 2346799
Q ss_pred HHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 144 KTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 144 ~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.||.+.+.+++.++.+. .+++++++|||.+.++.
T Consensus 148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 183 (273)
T PRK06182 148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEW 183 (273)
T ss_pred HHHHHHHHHHHHHHHHhcccCCEEEEEecCCccccc
Confidence 99999999998887543 38999999999998874
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=9.6e-11 Score=116.72 Aligned_cols=152 Identities=15% Similarity=0.058 Sum_probs=108.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------cccccChHHhhhHHhhhhccccccc-CCCCEEEEcC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFA 74 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A 74 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|+.+.+++.++.++ +.+. .++|+|||+|
T Consensus 13 lItGas~gIG~~ia~~l~--~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~id~vi~~a 85 (260)
T PRK06523 13 LVTGGTKGIGAATVARLL--EAGARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARA-----VLERLGGVDILVHVL 85 (260)
T ss_pred EEECCCCchhHHHHHHHH--HCCCEEEEEeCChhhhcCCceeEEecCCCCHHHHHHHHHH-----HHHHcCCCCEEEECC
Confidence 589999999999865332 223333333321 6899999988875544 3222 2599999999
Q ss_pred cccCcc------cCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHH
Q psy16545 75 AVKAVG------ESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGK 144 (600)
Q Consensus 75 ~~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~ 144 (600)
|..... ...+++...+++|+.++.++++++ ++.+.+++|++||...+.. .. .+..+|+.
T Consensus 86 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~----------~~-~~~~~Y~~ 154 (260)
T PRK06523 86 GGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP----------LP-ESTTAYAA 154 (260)
T ss_pred cccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC----------CC-CCcchhHH
Confidence 964211 123456678999999999887765 3445568999999755431 11 25688999
Q ss_pred HHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 145 TKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 145 sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
||.+.+.+++.++.++ .++++++++||.+.++.
T Consensus 155 sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~ 189 (260)
T PRK06523 155 AKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA 189 (260)
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence 9999999999998765 38999999999999884
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=9.3e-11 Score=116.65 Aligned_cols=147 Identities=16% Similarity=0.026 Sum_probs=106.5
Q ss_pred CCCCcchHHHHHHHhhhccCC-----------------------CccEEecccccccccChHHhhhHHhhhhcccccccC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGK-----------------------PVPYIVEARREGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~-----------------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
|||++|.+|+.+.+.....+. ++.++ .+|+++.+++.+++++ +.+..
T Consensus 7 ItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-----~~Dl~~~~~i~~~~~~-----~~~~~ 76 (257)
T PRK07024 7 ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVY-----AADVRDADALAAAAAD-----FIAAH 76 (257)
T ss_pred EEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEE-----EcCCCCHHHHHHHHHH-----HHHhC
Confidence 799999999998553221110 34455 7899999998885554 33322
Q ss_pred -CCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHH----HHHHcCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLE----VMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 66 -~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~----a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
.+|+|||+||...... ..+++...+++|+.|+.++++ ++++.+.+++|++||...+. +.
T Consensus 77 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~-----------~~ 145 (257)
T PRK07024 77 GLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVR-----------GL 145 (257)
T ss_pred CCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC-----------CC
Confidence 4899999999754221 223466789999999999887 44556667999999865431 11
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+..+.|+.||.+.+.+++.++.+. .+++++++|||.+.++.
T Consensus 146 -~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 188 (257)
T PRK07024 146 -PGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPM 188 (257)
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCch
Confidence 345789999999999999887543 38999999999999884
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.3e-10 Score=118.43 Aligned_cols=148 Identities=17% Similarity=0.099 Sum_probs=110.6
Q ss_pred cCCCCcchHHHHHHHhhhccCC--------------------------CccEEecccccccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGK--------------------------PVPYIVEARREGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~--------------------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
-|||++|.+|+.+++.....+. ++.++ .+|+++.+++.+++++ +
T Consensus 59 lITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~~~~~v~~~~~~-----~ 128 (300)
T PRK06128 59 LITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVAL-----PGDLKDEAFCRQLVER-----A 128 (300)
T ss_pred EEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEE-----ecCCCCHHHHHHHHHH-----H
Confidence 5899999999998653321111 12334 5899999988885554 3
Q ss_pred ccc-CCCCEEEEcCcccCcc-----cCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCC
Q psy16545 62 RCT-HDIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 62 ~~~-~~~d~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
.+. .++|+||||||..... ...+++...+++|+.++.++++++... .-.++|++||...|..
T Consensus 129 ~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~---------- 198 (300)
T PRK06128 129 VKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQP---------- 198 (300)
T ss_pred HHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCC----------
Confidence 322 2699999999975321 123457779999999999999999753 2258999999877642
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .....|+.||.+.+.+++.++.+. .|+++++++||.+.+|.
T Consensus 199 -~-~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~ 242 (300)
T PRK06128 199 -S-PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPL 242 (300)
T ss_pred -C-CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCC
Confidence 2 345789999999999999998764 38999999999999985
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.5e-10 Score=118.37 Aligned_cols=159 Identities=17% Similarity=0.068 Sum_probs=106.4
Q ss_pred cCCCCcchHHHHHHHhhhccC--------------------------CCccEEecccccccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG--------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~--------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
-|||++|.+|..+++.....+ ..+.++ .+|+.+.+++.+++++ +
T Consensus 20 lItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~-----~~Dl~d~~~v~~~~~~-----~ 89 (306)
T PRK06197 20 VVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQ-----ELDLTSLASVRAAADA-----L 89 (306)
T ss_pred EEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEE-----ECCCCCHHHHHHHHHH-----H
Confidence 589999999999955322111 123344 6899999988886554 3
Q ss_pred ccc-CCCCEEEEcCcccCccc--CCCChhhhHHhHHHHHH----HHHHHHHHcCCCeEEEecCcccc--CCCCCCCCCCC
Q psy16545 62 RCT-HDIDCVIHFAAVKAVGE--SMQEPLMYYKNNLIATI----NLLEVMKSHGVYQLVFSSSCTVY--GEPQFLPITED 132 (600)
Q Consensus 62 ~~~-~~~d~Vih~A~~~~~~~--~~~~~~~~~~~Nv~gt~----~ll~a~~~~~~~r~I~~SS~~vy--g~~~~~~~~E~ 132 (600)
.+. .++|+||||||...... ...+.+..+++|+.|+. .++..+++.+.+++|++||...+ +........+.
T Consensus 90 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~ 169 (306)
T PRK06197 90 RAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWE 169 (306)
T ss_pred HhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcc
Confidence 322 25999999999764322 23455678999999955 45555666656799999998643 32111122222
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceE--EEEecccccCCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNI--ISLRYFNPVGAH 177 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~--~ilR~~~v~G~~ 177 (600)
.+. .+.++|+.||++.+.+++.++.+. .++++ +.+.||.|..+.
T Consensus 170 ~~~-~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~ 217 (306)
T PRK06197 170 RRY-NRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL 217 (306)
T ss_pred cCC-CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence 334 466889999999999999988775 35554 445799887663
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=9.4e-11 Score=116.74 Aligned_cols=155 Identities=12% Similarity=0.030 Sum_probs=108.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|..+++... ..+.+++.++++ .+|++|.+++.+++++ +.+. .
T Consensus 16 lItGa~g~IG~~la~~l~--~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~-----~~~~~~ 88 (259)
T PRK08213 16 LVTGGSRGLGLQIAEALG--EAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEE-----TLERFG 88 (259)
T ss_pred EEECCCchHHHHHHHHHH--HcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH-----HHHHhC
Confidence 589999999999865322 112222222211 7899999988775544 3332 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc-----CCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH-----GVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~-----~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.+|+|||+||...... ....+...+++|+.++.++++++.+. +.+++|++||...+..... ..
T Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~-------~~- 160 (259)
T PRK08213 89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP-------EV- 160 (259)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc-------cc-
Confidence 5899999999753221 22345568889999999999987654 5679999999755432110 11
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.+|++.+.+++.+++++ .++++++++|+.+-.+.
T Consensus 161 ~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~ 203 (259)
T PRK08213 161 MDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKM 203 (259)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcc
Confidence 245889999999999999998875 37999999999887663
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1e-10 Score=115.62 Aligned_cols=150 Identities=16% Similarity=0.075 Sum_probs=106.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|+++.+++..+.+. +.+. .++|
T Consensus 10 lItGasg~iG~~la~~l~--~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~id 82 (249)
T PRK06500 10 LITGGTSGIGLETARQFL--AEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQA-----LAEAFGRLD 82 (249)
T ss_pred EEeCCCchHHHHHHHHHH--HCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHH-----HHHHhCCCC
Confidence 589999999999965322 222333333322 5788888877664433 2222 2589
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCc-cccCCCCCCCCCCCCCCCCCCCh
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSC-TVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~-~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
+|||+||...... ..+++...+++|+.++.++++++.+. ...++|++||. +.++. ...++
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~-------------~~~~~ 149 (249)
T PRK06500 83 AVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM-------------PNSSV 149 (249)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC-------------CCccH
Confidence 9999999764321 23456679999999999999999752 22477777774 44442 34589
Q ss_pred HHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 142 YGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
|+.+|.+.|.+++.++.+. .+++++++|||.+++|.
T Consensus 150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~ 187 (249)
T PRK06500 150 YAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPL 187 (249)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence 9999999999999888764 38999999999999984
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.1e-10 Score=117.60 Aligned_cols=146 Identities=14% Similarity=0.052 Sum_probs=105.5
Q ss_pred cCCCCcchHHHHHHHhhhccC--------------------------CCccEEecccccccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG--------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~--------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
-|||++|.+|+.+.+.....+ .+++++ .+|++|++++.+ +++ +
T Consensus 7 lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~D~~d~~~~~~-~~~-----~ 75 (280)
T PRK06914 7 IVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQ-----QLDVTDQNSIHN-FQL-----V 75 (280)
T ss_pred EEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEE-----ecCCCCHHHHHH-HHH-----H
Confidence 489999999999954221111 124445 789999888776 433 3
Q ss_pred ccc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccc-cCCCCCCCCCC
Q psy16545 62 RCT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTV-YGEPQFLPITE 131 (600)
Q Consensus 62 ~~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~v-yg~~~~~~~~E 131 (600)
... ..+|+||||||...... ..+++...+++|+.++.++++++ ++.+.+++|++||... +|.
T Consensus 76 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~-------- 147 (280)
T PRK06914 76 LKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGF-------- 147 (280)
T ss_pred HHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCC--------
Confidence 222 25899999999765322 12345567889999999998885 5556679999999643 332
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 132 DHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 132 ~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.++|+.||.+.+.+++.++.+. .+++++++|||.++++.
T Consensus 148 -----~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (280)
T PRK06914 148 -----PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNI 190 (280)
T ss_pred -----CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccch
Confidence 456899999999999999887442 28999999999999884
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.2e-10 Score=115.27 Aligned_cols=151 Identities=13% Similarity=0.026 Sum_probs=110.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------cccccChHHhhhHHhhhhccccccc-CCCCEEEEcC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFA 74 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A 74 (600)
.|||++|.+|..+.+.. ...+.+++.++++ ++|+++.+++.++.++ +... ..+|+|||||
T Consensus 12 lItGas~~iG~~la~~l--~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~id~vi~~a 84 (252)
T PRK08220 12 WVTGAAQGIGYAVALAF--VEAGAKVIGFDQAFLTQEDYPFATFVLDVSDAAAVAQVCQR-----LLAETGPLDVLVNAA 84 (252)
T ss_pred EEeCCCchHHHHHHHHH--HHCCCEEEEEecchhhhcCCceEEEEecCCCHHHHHHHHHH-----HHHHcCCCCEEEECC
Confidence 58999999999996633 2222233322221 6899999988885544 3222 2589999999
Q ss_pred cccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHH
Q psy16545 75 AVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTK 146 (600)
Q Consensus 75 ~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK 146 (600)
|...... ..+++...+++|+.++..+++++.. .+.+++|++||..... +. .+.+.|+.||
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~-----------~~-~~~~~Y~~sK 152 (252)
T PRK08220 85 GILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV-----------PR-IGMAAYGASK 152 (252)
T ss_pred CcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc-----------CC-CCCchhHHHH
Confidence 9864322 2345667899999999999998743 4456899999975432 22 4568899999
Q ss_pred HHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 147 HFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 147 ~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.+++.++++. .++++++++||.++++.
T Consensus 153 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~ 185 (252)
T PRK08220 153 AALTSLAKCVGLELAPYGVRCNVVSPGSTDTDM 185 (252)
T ss_pred HHHHHHHHHHHHHhhHhCeEEEEEecCcCcchh
Confidence 99999999998773 38999999999999985
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=6e-11 Score=118.00 Aligned_cols=147 Identities=14% Similarity=0.047 Sum_probs=108.0
Q ss_pred cCCCCcchHHHHHHHhhhccC---------------------CCccEEecccccccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG---------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~---------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|.++++.....+ ..+.++ .+|+++.+++.+++++ +.+. .
T Consensus 10 lItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-----~~D~~~~~~~~~~~~~-----~~~~~~ 79 (257)
T PRK07067 10 LLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAV-----SLDVTRQDSIDRIVAA-----AVERFG 79 (257)
T ss_pred EEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEE-----EccCCCHHHHHHHHHH-----HHHHcC
Confidence 489999999999965332111 123445 7899999988885554 3222 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHcC-----CCeEEEecCcc-ccCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHG-----VYQLVFSSSCT-VYGEPQFLPITEDHPT 135 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~-----~~r~I~~SS~~-vyg~~~~~~~~E~~~~ 135 (600)
.+|++||+||...... ..+++...+++|+.++.++++++.+.. -.++|++||.. .++ .
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~ 147 (257)
T PRK07067 80 GIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRG------------E 147 (257)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCC------------C
Confidence 5999999999764322 224566789999999999999986431 24799999963 232 2
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++++. .++++++++||.++++.
T Consensus 148 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~ 190 (257)
T PRK07067 148 -ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPM 190 (257)
T ss_pred -CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchh
Confidence 466899999999999999988763 38999999999999984
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.3e-10 Score=113.13 Aligned_cols=119 Identities=15% Similarity=0.088 Sum_probs=90.1
Q ss_pred hCCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcccc----ccChHHHHHHHHHHHHHHHHHH----HHc
Q psy16545 250 TGKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVM----KSH 316 (600)
Q Consensus 250 ~~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~~----~~~ 316 (600)
.+.++.++.+|+++.+++.++++. .++|+|||+|+....... .++....++.|+.++.++++++ ++.
T Consensus 46 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~ 125 (276)
T PRK06482 46 YGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ 125 (276)
T ss_pred ccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 345788999999999988877653 258999999997643322 2345667889999999999997 455
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
+.+++|++||...... .|..+.|+.|| ...|.+++.+... ++++++++||+.
T Consensus 126 ~~~~iv~~sS~~~~~~------------~~~~~~Y~~sK---~a~~~~~~~l~~~~~~~gi~v~~v~pg~ 180 (276)
T PRK06482 126 GGGRIVQVSSEGGQIA------------YPGFSLYHATK---WGIEGFVEAVAQEVAPFGIEFTIVEPGP 180 (276)
T ss_pred CCCEEEEEcCcccccC------------CCCCchhHHHH---HHHHHHHHHHHHHhhccCcEEEEEeCCc
Confidence 6789999999654321 12247899999 7788888888765 689999999864
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.4e-10 Score=115.36 Aligned_cols=150 Identities=10% Similarity=0.012 Sum_probs=110.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------cccccChHHhhhHHhhhhcccccccC-CCCEEEEcCcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------EGDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAAV 76 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~ 76 (600)
-|||+++.+|..+++... ..+.+++.++|+ .+|+++++++.+++++ +.+.. ++|+||||||.
T Consensus 10 lItGas~gIG~~ia~~l~--~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~-----~~~~~~~id~li~~Ag~ 82 (258)
T PRK06398 10 IVTGGSQGIGKAVVNRLK--EEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDY-----VISKYGRIDILVNNAGI 82 (258)
T ss_pred EEECCCchHHHHHHHHHH--HCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHH-----HHHHcCCCCEEEECCCC
Confidence 589999999999976432 223333333322 6899999998886554 43332 59999999998
Q ss_pred cCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q psy16545 77 KAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHF 148 (600)
Q Consensus 77 ~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~ 148 (600)
..... ..+++...+++|+.++.++++++.+ .+.+++|++||...+. +. .+.+.|+.||.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~-~~~~~Y~~sKaa 150 (258)
T PRK06398 83 ESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA-----------VT-RNAAAYVTSKHA 150 (258)
T ss_pred CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc-----------CC-CCCchhhhhHHH
Confidence 54322 2234556789999999999888753 3457999999976543 22 466899999999
Q ss_pred HHHHHHHHHhhc-CCceEEEEecccccCC
Q psy16545 149 IEEMLKDLSKAH-KEWNIISLRYFNPVGA 176 (600)
Q Consensus 149 ~e~~~~~~~~~~-~~~~~~ilR~~~v~G~ 176 (600)
.+.+++.++.+. ++++++.++||.+-.+
T Consensus 151 l~~~~~~la~e~~~~i~vn~i~PG~v~T~ 179 (258)
T PRK06398 151 VLGLTRSIAVDYAPTIRCVAVCPGSIRTP 179 (258)
T ss_pred HHHHHHHHHHHhCCCCEEEEEecCCccch
Confidence 999999998876 2589999999988766
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.2e-10 Score=115.14 Aligned_cols=148 Identities=15% Similarity=0.089 Sum_probs=106.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|.++.+.... .+.+++.++|. .+|+++.+++.++.++ +.+. .
T Consensus 10 lItGasg~iG~~la~~l~~--~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~~ 82 (250)
T PRK07774 10 IVTGAAGGIGQAYAEALAR--EGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADA-----TVSAFG 82 (250)
T ss_pred EEECCCchHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH-----HHHHhC
Confidence 5899999999999653221 11222222221 6899998887774443 3222 2
Q ss_pred CCCEEEEcCcccCc-------ccCCCChhhhHHhHHHHHHHHHHHHHHc----CCCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAV-------GESMQEPLMYYKNNLIATINLLEVMKSH----GVYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 66 ~~d~Vih~A~~~~~-------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
.+|+|||+||.... .....++...+++|+.++.++++++.+. +.+++|++||...|.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------ 150 (250)
T PRK07774 83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL------------ 150 (250)
T ss_pred CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC------------
Confidence 58999999997531 1122345568899999999999998653 356999999986653
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.++|+.||.+.+.+++.++++. .++.+++++||.+..+.
T Consensus 151 ---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 192 (250)
T PRK07774 151 ---YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEA 192 (250)
T ss_pred ---CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcc
Confidence 34789999999999999998775 38999999999888775
|
|
| >KOG2774|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.6e-11 Score=110.74 Aligned_cols=204 Identities=15% Similarity=0.127 Sum_probs=144.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------cccccChHHhhhHHhhhhcccccccCCCCEEEEcC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFA 74 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A 74 (600)
.|||+-|++|..++++.+-.-..-.++..|+. -.|+.|...+++ ++-..++|.+||..
T Consensus 48 LITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~~GPyIy~DILD~K~L~e---------IVVn~RIdWL~HfS 118 (366)
T KOG2774|consen 48 LITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTDVGPYIYLDILDQKSLEE---------IVVNKRIDWLVHFS 118 (366)
T ss_pred EEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcccCCchhhhhhccccHHH---------hhcccccceeeeHH
Confidence 48999999999998887642111122322322 358888888888 76667899999998
Q ss_pred cccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCC-CCCCCCCCCCCCCChHHHHHHHHHHHH
Q psy16545 75 AVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQF-LPITEDHPTGNIKNVYGKTKHFIEEML 153 (600)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~-~~~~E~~~~~~p~s~Y~~sK~~~e~~~ 153 (600)
+..+. ..+.+.....++|+.|..|+++.|++++. ++...||++.+|.... .|...-.-. .|.+.||.||..+|.+-
T Consensus 119 ALLSA-vGE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQ-RPRTIYGVSKVHAEL~G 195 (366)
T KOG2774|consen 119 ALLSA-VGETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQ-RPRTIYGVSKVHAELLG 195 (366)
T ss_pred HHHHH-hcccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeee-cCceeechhHHHHHHHH
Confidence 87642 34566667889999999999999999987 7888999999985321 122222333 67889999999999999
Q ss_pred HHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeecccc
Q psy16545 154 KDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVN 232 (600)
Q Consensus 154 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~ 232 (600)
+.+..++ ++++.++|++.+....+. | .|..+..+..+..+++..+.+..+ .+...-.+.|..|+...+++
T Consensus 196 Ey~~hrF-g~dfr~~rfPg~is~~~p---g---ggttdya~A~f~~Al~~gk~tCyl--rpdtrlpmmy~~dc~~~~~~ 265 (366)
T KOG2774|consen 196 EYFNHRF-GVDFRSMRFPGIISATKP---G---GGTTDYAIAIFYDALQKGKHTCYL--RPDTRLPMMYDTDCMASVIQ 265 (366)
T ss_pred HHHHhhc-CccceecccCcccccCCC---C---CCcchhHHHHHHHHHHcCCccccc--CCCccCceeehHHHHHHHHH
Confidence 9888887 999999999988877543 1 222345566777777644344443 34455667888887765553
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.1e-10 Score=113.68 Aligned_cols=148 Identities=14% Similarity=0.078 Sum_probs=108.6
Q ss_pred ccCCCCcchHHHHHHHhhhccC-----------------------CCccEEecccccccccChHHhhhHHhhhhcccccc
Q psy16545 7 NLGTGQGTSVLQLLRTFERVTG-----------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 7 ~~vtG~~g~~~~~l~~~~~~~~-----------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
--|||++|.+|..+.+.....+ .++.++ .+|++|++++.+++++ +.+
T Consensus 8 ~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-----~~D~~~~~~~~~~~~~-----i~~ 77 (252)
T PRK06138 8 AIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFAR-----QGDVGSAEAVEALVDF-----VAA 77 (252)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEE-----EcCCCCHHHHHHHHHH-----HHH
Confidence 3589999999999865322111 123445 7899999998885554 332
Q ss_pred c-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccc-cCCCCCCCCCCCC
Q psy16545 64 T-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTV-YGEPQFLPITEDH 133 (600)
Q Consensus 64 ~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~v-yg~~~~~~~~E~~ 133 (600)
. .++|+|||+||...... ..++....+++|+.++.++.+++ ++.+.+++|++||... ++.
T Consensus 78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~---------- 147 (252)
T PRK06138 78 RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG---------- 147 (252)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC----------
Confidence 2 26999999999864322 22345557899999998877765 4556779999999744 332
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...++|+.+|.+.+.+++.++++. .+++++++|||.++++.
T Consensus 148 ---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (252)
T PRK06138 148 ---RGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPY 190 (252)
T ss_pred ---CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcc
Confidence 456789999999999999998765 38999999999999985
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1e-10 Score=115.91 Aligned_cols=146 Identities=17% Similarity=0.128 Sum_probs=97.0
Q ss_pred cCCCCcchHHHHHHHhhhccC--------------------CCccEEecccccccccCh-HHhhhHHhhhhcccccccCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG--------------------KPVPYIVEARREGDIVSM-YANTDLAQKELGWSARCTHD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~--------------------~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~~~~~ 66 (600)
.|||++|++|+.+.+.....+ .+++++ .+|+.+. +.+.+ .+. .+
T Consensus 21 lItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~~l~~---------~~~-~~ 85 (251)
T PLN00141 21 FVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIV-----RADVTEGSDKLVE---------AIG-DD 85 (251)
T ss_pred EEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEE-----EeeCCCCHHHHHH---------Hhh-cC
Confidence 689999999999954321111 123444 6788773 44444 441 27
Q ss_pred CCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHH
Q psy16545 67 IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTK 146 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK 146 (600)
+|+|||+++.... .++...+++|..++.++++++++.+++++|++||.++||.....+..+......+...|..+|
T Consensus 86 ~d~vi~~~g~~~~----~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k 161 (251)
T PLN00141 86 SDAVICATGFRRS----FDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAK 161 (251)
T ss_pred CCEEEECCCCCcC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHH
Confidence 9999999886421 122234578999999999999999999999999999998543222222111101223345568
Q ss_pred HHHHHHHHHHHhhcCCceEEEEecccccCCC
Q psy16545 147 HFIEEMLKDLSKAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 147 ~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~ 177 (600)
..+|++++. . +++++++||++++++.
T Consensus 162 ~~~e~~l~~----~-gi~~~iirpg~~~~~~ 187 (251)
T PLN00141 162 LQAEKYIRK----S-GINYTIVRPGGLTNDP 187 (251)
T ss_pred HHHHHHHHh----c-CCcEEEEECCCccCCC
Confidence 888876653 2 8999999999999874
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=7.1e-11 Score=130.21 Aligned_cols=158 Identities=15% Similarity=0.108 Sum_probs=105.0
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc------------cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAV 76 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~ 76 (600)
|||++|++|+++.+. +...+.+++++|+. .+|+.+.. +.+ ++. ++|+|||+|+.
T Consensus 5 VTGAaGFIGs~La~~--Ll~~G~~Vi~ldr~~~~~~~~~ve~v~~Dl~d~~-l~~---------al~--~~D~VIHLAa~ 70 (699)
T PRK12320 5 VTDATGAVGRSVTRQ--LIAAGHTVSGIAQHPHDALDPRVDYVCASLRNPV-LQE---------LAG--EADAVIHLAPV 70 (699)
T ss_pred EECCCCHHHHHHHHH--HHhCCCEEEEEeCChhhcccCCceEEEccCCCHH-HHH---------Hhc--CCCEEEEcCcc
Confidence 899999999999653 22223333333331 56777763 444 554 79999999986
Q ss_pred cCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q psy16545 77 KAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDL 156 (600)
Q Consensus 77 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~ 156 (600)
... . ..++|+.|+.+++++|++.++ ++|++||. +|.. ..|. .+|.+++.
T Consensus 71 ~~~-----~---~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~---------------~~~~----~aE~ll~~- 119 (699)
T PRK12320 71 DTS-----A---PGGVGITGLAHVANAAARAGA-RLLFVSQA--AGRP---------------ELYR----QAETLVST- 119 (699)
T ss_pred Ccc-----c---hhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCC---------------cccc----HHHHHHHh-
Confidence 421 1 235899999999999999997 79999986 3421 1122 35665543
Q ss_pred HhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeecccccc
Q psy16545 157 SKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 157 ~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a~ 234 (600)
. +++++++|++++|||+.... ..++++.+.+... .++++. ++|++|+++.+..++
T Consensus 120 ---~-~~p~~ILR~~nVYGp~~~~~--------~~r~I~~~l~~~~-~~~pI~----------vIyVdDvv~alv~al 174 (699)
T PRK12320 120 ---G-WAPSLVIRIAPPVGRQLDWM--------VCRTVATLLRSKV-SARPIR----------VLHLDDLVRFLVLAL 174 (699)
T ss_pred ---c-CCCEEEEeCceecCCCCccc--------HhHHHHHHHHHHH-cCCceE----------EEEHHHHHHHHHHHH
Confidence 2 68999999999999953311 1345665555443 345554 379999998887654
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.9e-10 Score=114.22 Aligned_cols=150 Identities=15% Similarity=0.106 Sum_probs=107.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
.|||++|.+|+++.+.. ...+.+++..+++ .+|+++.+++.+++++ +... .
T Consensus 14 lVtGa~g~iG~~la~~L--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~~ 86 (274)
T PRK07775 14 LVAGASSGIGAATAIEL--AAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQ-----AEEALG 86 (274)
T ss_pred EEECCCchHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH-----HHHhcC
Confidence 58999999999996532 2223333322221 5799999988875543 2211 2
Q ss_pred CCCEEEEcCcccCcccC----CCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|+|||+||....... .+++...+++|+.++.++++++. +.+..+||++||...+.. . .
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~-----------~-~ 154 (274)
T PRK07775 87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQ-----------R-P 154 (274)
T ss_pred CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCC-----------C-C
Confidence 68999999997643221 23445678999999999998874 334568999999866642 2 3
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+.+.|+.+|.+.|.+++.++++. .+++++++|||.+.++
T Consensus 155 ~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~ 195 (274)
T PRK07775 155 HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTG 195 (274)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCc
Confidence 45789999999999999998764 3899999999988655
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.8e-11 Score=118.06 Aligned_cols=127 Identities=21% Similarity=0.167 Sum_probs=80.7
Q ss_pred hCCceeEEEeecCChh------hHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Q psy16545 250 TGKKVDFYSCDLVDKN------RLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVF 323 (600)
Q Consensus 250 ~~~~v~~i~~Dl~~~~------~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~ 323 (600)
..++++++.||++++. .+..+.+ .+|+|||+||...... ......+.|+.||.++++.|.+.+.++|+|
T Consensus 58 ~~~ri~~v~GDl~~~~lGL~~~~~~~L~~--~v~~IiH~Aa~v~~~~---~~~~~~~~NV~gt~~ll~la~~~~~~~~~~ 132 (249)
T PF07993_consen 58 ALSRIEVVEGDLSQPNLGLSDEDYQELAE--EVDVIIHCAASVNFNA---PYSELRAVNVDGTRNLLRLAAQGKRKRFHY 132 (249)
T ss_dssp HTTTEEEEE--TTSGGGG--HHHHHHHHH--H--EEEE--SS-SBS----S--EEHHHHHHHHHHHHHHHTSSS---EEE
T ss_pred hhccEEEEeccccccccCCChHHhhcccc--ccceeeecchhhhhcc---cchhhhhhHHHHHHHHHHHHHhccCcceEE
Confidence 3678999999999854 4555555 7899999999876543 334478899999999999999776679999
Q ss_pred ecCcccccCCCCCC------CCCCC--CCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeeccc
Q psy16545 324 SSSCTVYGEPQFLP------ITEDH--PTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL 384 (600)
Q Consensus 324 ~SS~~vYg~~~~~~------~~E~~--~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~ 384 (600)
+||..+.+...... ..|+. +.....+.|..|| ..+|++++.+.++.|++++++||+.+
T Consensus 133 iSTa~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK---~~aE~~l~~a~~~~g~p~~I~Rp~~i 198 (249)
T PF07993_consen 133 ISTAYVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSK---WVAERLLREAAQRHGLPVTIYRPGII 198 (249)
T ss_dssp EEEGGGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHH---HHHHHHHHHHHHHH---EEEEEE-EE
T ss_pred eccccccCCCCCcccccccccccccchhhccCCccHHHHH---HHHHHHHHHHHhcCCceEEEEecCcc
Confidence 99965665544211 11111 2223347899999 88999999999988999999999983
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.3e-10 Score=113.24 Aligned_cols=148 Identities=14% Similarity=0.043 Sum_probs=107.7
Q ss_pred cCCCCcchHHHHHHHhhhcc------------------------CCCccEEecccccccccChHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVT------------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~------------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
-|||++|++|+.+.+..... ..++.++ ++|+++.+++.++.+. +.+
T Consensus 7 lItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~~~~~~~~~~~-----~~~ 76 (250)
T TIGR03206 7 IVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAF-----ACDITDRDSVDTAVAA-----AEQ 76 (250)
T ss_pred EEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEE-----EcCCCCHHHHHHHHHH-----HHH
Confidence 48999999999985532111 1124455 7899998888774433 221
Q ss_pred c-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 64 T-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 64 ~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
. ..+|+|||+||...... ...+....+++|+.++.++++++. +.+.+++|++||...+...
T Consensus 77 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~---------- 146 (250)
T TIGR03206 77 ALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS---------- 146 (250)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC----------
Confidence 1 25899999998753211 122345679999999999988875 4566799999998766531
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...+.|+.+|.+.+.+++.++.+. .+++++++|||.++++.
T Consensus 147 --~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~ 189 (250)
T TIGR03206 147 --SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTAL 189 (250)
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchh
Confidence 345789999999999999988764 38999999999999885
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=3e-10 Score=111.80 Aligned_cols=147 Identities=13% Similarity=0.024 Sum_probs=105.7
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc-----------------cccccChHHhhhHHhhhhcccccccCCCCEEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVI 71 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vi 71 (600)
|||++|.+|+.+.+... ..+.+++.++|+ .+|+++.+++.+++++ +. ..+|.+|
T Consensus 6 ItGas~giG~~la~~L~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~--~~~d~~i 76 (240)
T PRK06101 6 ITGATSGIGKQLALDYA--KQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQ-----LP--FIPELWI 76 (240)
T ss_pred EEcCCcHHHHHHHHHHH--hCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHh-----cc--cCCCEEE
Confidence 79999999999855332 223333333332 6899999998885543 22 2589999
Q ss_pred EcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCcc-ccCCCCCCCCCCCCCCCCCCChHHH
Q psy16545 72 HFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCT-VYGEPQFLPITEDHPTGNIKNVYGK 144 (600)
Q Consensus 72 h~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~-vyg~~~~~~~~E~~~~~~p~s~Y~~ 144 (600)
|+||...... ..++....+++|+.++.++++++... ..+++|++||.. .++ . .....|+.
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~------------~-~~~~~Y~a 143 (240)
T PRK06101 77 FNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA------------L-PRAEAYGA 143 (240)
T ss_pred EcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC------------C-CCCchhhH
Confidence 9998643211 12334568999999999999998763 235799998853 222 2 34578999
Q ss_pred HHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 145 TKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 145 sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
||.+.+.+++.++.+. .+++++++|||.++++.
T Consensus 144 sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~ 178 (240)
T PRK06101 144 SKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPL 178 (240)
T ss_pred HHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCC
Confidence 9999999999887543 38999999999999885
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.1e-10 Score=122.83 Aligned_cols=114 Identities=16% Similarity=-0.001 Sum_probs=85.2
Q ss_pred cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCcc
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCT 119 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~ 119 (600)
.+|+.+.+++.+ ++. ++|+||||||.... ...++...+++|+.|+.+|+++|++.+++|||++||.+
T Consensus 144 ~gDLtD~esI~~---------aLg--giDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 144 ECDLEKPDQIGP---------ALG--NASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred EecCCCHHHHHH---------Hhc--CCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 788988888877 665 79999999987532 12345567889999999999999999999999999986
Q ss_pred ccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCC
Q psy16545 120 VYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 120 vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~ 177 (600)
.+... ..+. .. .....|...|..+|+.+.. . |+++++||||.+.++.
T Consensus 211 a~~~g----~p~~-~~-~sk~~~~~~KraaE~~L~~----s-GIrvTIVRPG~L~tp~ 257 (576)
T PLN03209 211 TNKVG----FPAA-IL-NLFWGVLCWKRKAEEALIA----S-GLPYTIVRPGGMERPT 257 (576)
T ss_pred hcccC----cccc-ch-hhHHHHHHHHHHHHHHHHH----c-CCCEEEEECCeecCCc
Confidence 53110 0011 12 2335677788888887753 2 8999999999999874
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.1e-10 Score=111.72 Aligned_cols=148 Identities=17% Similarity=0.086 Sum_probs=108.6
Q ss_pred cCCCCcchHHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
-|||++|.+|..+.+.....+ ..++++ .+|++|.+++.++.++ +.
T Consensus 10 lItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~D~~d~~~i~~~~~~-----~~ 79 (254)
T PRK12746 10 LVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLI-----EADLNSIDGVKKLVEQ-----LK 79 (254)
T ss_pred EEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEE-----EcCcCCHHHHHHHHHH-----HH
Confidence 589999999999865321111 123345 6899999988885554 32
Q ss_pred cc-------CCCCEEEEcCcccCcccCC----CChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCC
Q psy16545 63 CT-------HDIDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPI 129 (600)
Q Consensus 63 ~~-------~~~d~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~ 129 (600)
+. .++|+|||+||........ ......+++|+.++.++++++.+. ..+++|++||..++..
T Consensus 80 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~------ 153 (254)
T PRK12746 80 NELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG------ 153 (254)
T ss_pred HHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC------
Confidence 21 2599999999986432211 223557889999999999998763 3358999999876542
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 130 TEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 130 ~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.+. .++++++++||.+++|.
T Consensus 154 -----~-~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~ 197 (254)
T PRK12746 154 -----F-TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDI 197 (254)
T ss_pred -----C-CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcc
Confidence 2 456789999999999999888764 37999999999999884
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.16 E-value=7.4e-10 Score=108.72 Aligned_cols=170 Identities=11% Similarity=0.030 Sum_probs=116.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCc-cEEecccc--------------cccccChHHhhhHHhhhhcccccccC-CCCEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPV-PYIVEARR--------------EGDIVSMYANTDLAQKELGWSARCTH-DIDCVI 71 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~-~~~~~~~~--------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vi 71 (600)
-|||++|.+|+.+++.... .+. .++.++|+ .+|+.+.+++.+ +++.. .+|+||
T Consensus 10 lItGgsg~iG~~la~~l~~--~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~---------~~~~~~~id~vi 78 (238)
T PRK08264 10 LVTGANRGIGRAFVEQLLA--RGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAA---------AAEAASDVTILV 78 (238)
T ss_pred EEECCCchHHHHHHHHHHH--CCcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHH---------HHHhcCCCCEEE
Confidence 5899999999998663322 222 22222221 689999888877 33322 489999
Q ss_pred EcCccc-Ccc----cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChH
Q psy16545 72 HFAAVK-AVG----ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVY 142 (600)
Q Consensus 72 h~A~~~-~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y 142 (600)
|+||.. ... ...+++...+++|+.++.++++++. +.+.+++|++||...+.. . .+.+.|
T Consensus 79 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~-----------~-~~~~~y 146 (238)
T PRK08264 79 NNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN-----------F-PNLGTY 146 (238)
T ss_pred ECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC-----------C-CCchHh
Confidence 999983 211 1234456688999999999999865 345678999999765532 2 456789
Q ss_pred HHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhc
Q psy16545 143 GKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAI 202 (600)
Q Consensus 143 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (600)
+.+|.+.+.+++.++.+. .+++++++|||.+.++......+. ......+...+...+.
T Consensus 147 ~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~--~~~~~~~a~~~~~~~~ 206 (238)
T PRK08264 147 SASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDAP--KASPADVARQILDALE 206 (238)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCcC--CCCHHHHHHHHHHHHh
Confidence 999999999999888764 389999999999988853322221 1122445666666655
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.7e-10 Score=114.61 Aligned_cols=150 Identities=14% Similarity=0.065 Sum_probs=105.8
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
|||++|++|..+.+... ..+.+++.++++ .+|+++++++.++.+. +.+. .
T Consensus 7 ItG~sg~iG~~la~~L~--~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 79 (256)
T PRK12745 7 VTGGRRGIGLGIARALA--AAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDA-----AQAAWG 79 (256)
T ss_pred EeCCCchHHHHHHHHHH--HCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH-----HHHhcC
Confidence 79999999998854322 112222222211 6899998887774443 2221 2
Q ss_pred CCCEEEEcCcccCcc------cCCCChhhhHHhHHHHHHHHHHHHHHc-----C-----CCeEEEecCccccCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVG------ESMQEPLMYYKNNLIATINLLEVMKSH-----G-----VYQLVFSSSCTVYGEPQFLPI 129 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~~~~-----~-----~~r~I~~SS~~vyg~~~~~~~ 129 (600)
.+|+||||||..... ...+.+...+++|+.++.++++++.+. + .+++|++||...+..
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------ 153 (256)
T PRK12745 80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV------ 153 (256)
T ss_pred CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC------
Confidence 589999999975321 122455668999999999999887542 1 467999999765421
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 130 TEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 130 ~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.+. .+++++++|||.+.++.
T Consensus 154 -----~-~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~ 197 (256)
T PRK12745 154 -----S-PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDM 197 (256)
T ss_pred -----C-CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcc
Confidence 1 455789999999999999998753 38999999999999875
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.6e-10 Score=115.72 Aligned_cols=151 Identities=15% Similarity=0.039 Sum_probs=109.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccc-----------------------ccccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEAR-----------------------REGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~-----------------------~~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|.+|..+++... ..+.+++..++ -.+|+++.+++.+++++ +.+.
T Consensus 53 lITGas~gIG~aia~~L~--~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~ 125 (294)
T PRK07985 53 LVTGGDSGIGRAAAIAYA--REGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHE-----AHKA 125 (294)
T ss_pred EEECCCCcHHHHHHHHHH--HCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHH-----HHHH
Confidence 589999999999865322 22222222111 16799998888775544 3322
Q ss_pred -CCCCEEEEcCcccCc-----ccCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|++||+||.... .....++...+++|+.++..+++++... .-.++|++||...+.. .
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~-----------~- 193 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQP-----------S- 193 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccC-----------C-
Confidence 258999999996421 1223556779999999999999998653 1258999999876642 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.....|+.||.+.+.+++.++.+. .++++++++||.|.+|.
T Consensus 194 ~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~ 236 (294)
T PRK07985 194 PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence 345789999999999999998874 38999999999999985
|
|
| >KOG2865|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=8.8e-11 Score=111.41 Aligned_cols=175 Identities=14% Similarity=0.089 Sum_probs=130.7
Q ss_pred cCCCCcchHHHHHHHhhhccCC-----------------------CccEEecccccccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGK-----------------------PVPYIVEARREGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~-----------------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
.|.|++||+|+-+.+.....+. .+-+. ..|+.|++++++ ++.
T Consensus 65 TVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~-----~fd~~DedSIr~---------vvk- 129 (391)
T KOG2865|consen 65 TVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFM-----KFDLRDEDSIRA---------VVK- 129 (391)
T ss_pred EEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeee-----ccCCCCHHHHHH---------HHH-
Confidence 3679999999998553222211 13333 568899999999 776
Q ss_pred CCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHH
Q psy16545 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGK 144 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~ 144 (600)
.-.+|||+.|.-- +...-.+.++|+.+...|++.|++.|+.|||++|+...- . ...|-|-.
T Consensus 130 -~sNVVINLIGrd~----eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan-------------v-~s~Sr~Lr 190 (391)
T KOG2865|consen 130 -HSNVVINLIGRDY----ETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN-------------V-KSPSRMLR 190 (391)
T ss_pred -hCcEEEEeecccc----ccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc-------------c-cChHHHHH
Confidence 5689999988642 122223677899999999999999999999999997521 2 34477899
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCc-ccccCcce
Q psy16545 145 TKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADY-ETEDGTGK 223 (600)
Q Consensus 145 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~-~~~~~~~v 223 (600)
||.+.|..++.... +.+|+||..+||.- +.++...+..-+ +-..+++++.|. ..+..++|
T Consensus 191 sK~~gE~aVrdafP-----eAtIirPa~iyG~e-------------Drfln~ya~~~r-k~~~~pL~~~GekT~K~PVyV 251 (391)
T KOG2865|consen 191 SKAAGEEAVRDAFP-----EATIIRPADIYGTE-------------DRFLNYYASFWR-KFGFLPLIGKGEKTVKQPVYV 251 (391)
T ss_pred hhhhhHHHHHhhCC-----cceeechhhhcccc-------------hhHHHHHHHHHH-hcCceeeecCCcceeeccEEE
Confidence 99999999988654 35999999999984 446665555444 356889999883 45678999
Q ss_pred EEeeeccccccc
Q psy16545 224 VVAIDNFVNSVH 235 (600)
Q Consensus 224 ~d~v~~~~~a~~ 235 (600)
.|++.++..+++
T Consensus 252 ~DVaa~IvnAvk 263 (391)
T KOG2865|consen 252 VDVAAAIVNAVK 263 (391)
T ss_pred ehHHHHHHHhcc
Confidence 999998887755
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=5e-10 Score=110.82 Aligned_cols=151 Identities=13% Similarity=0.001 Sum_probs=107.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEe-cccc---------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIV-EARR---------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~-~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+.+.+... ..+.+++. .+|. .+|+++++++.+++++ +...
T Consensus 8 lItGa~g~iG~~~a~~l~--~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 80 (250)
T PRK08063 8 LVTGSSRGIGKAIALRLA--EEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQ-----IDEEF 80 (250)
T ss_pred EEeCCCchHHHHHHHHHH--HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH-----HHHHc
Confidence 489999999999865322 22222221 1110 6899999988885544 3222
Q ss_pred CCCCEEEEcCcccCcccCC----CChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
..+|+|||+||........ .+....+++|+.++.++++++.+ .+.++||++||...+. +.
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~- 148 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR-----------YL- 148 (250)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc-----------CC-
Confidence 2589999999975432221 23344788999999999998865 3456999999975432 22
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .++++++++||.+..+.
T Consensus 149 ~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~ 191 (250)
T PRK08063 149 ENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDA 191 (250)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCch
Confidence 456799999999999999998764 38999999999998774
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.1e-10 Score=112.13 Aligned_cols=151 Identities=17% Similarity=0.085 Sum_probs=109.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------------cccccChHHhhhHHhhhhccccccc-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------------EGDIVSMYANTDLAQKELGWSARCT-HDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~ 67 (600)
-|||++|.+|+.+++.. ...+..++.++|+ .+|+++.+++.+++++ +.+. .++
T Consensus 9 lItGas~gIG~~ia~~l--~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~~ 81 (248)
T TIGR01832 9 LVTGANTGLGQGIAVGL--AEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDS-----AVEEFGHI 81 (248)
T ss_pred EEECCCchHHHHHHHHH--HHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH-----HHHHcCCC
Confidence 48999999999985532 2222233322221 6899999988875554 3322 259
Q ss_pred CEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cC-CCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG-VYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 68 d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
|+|||+||...... ...++...+++|+.++.++++++.+ .+ .+++|++||...+.. . ..
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~-~~ 149 (248)
T TIGR01832 82 DILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQG-----------G-IR 149 (248)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccC-----------C-CC
Confidence 99999999864322 2234566899999999999998753 33 468999999876642 1 34
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...|+.||.+.+.+++.++++. .++++++++||.+..+.
T Consensus 150 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 190 (248)
T TIGR01832 150 VPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNN 190 (248)
T ss_pred CchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcc
Confidence 5689999999999999999875 38999999999998874
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=3e-10 Score=112.80 Aligned_cols=157 Identities=20% Similarity=0.103 Sum_probs=105.9
Q ss_pred cCCCCcchHHHHHHHhhhccC--------------------------CCccEEecccccccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG--------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~--------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
-|||++|.+|+.+++.....+ ..+.++ .+|+.|++++.+++++ +
T Consensus 8 lItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-----~~Dl~d~~~~~~~~~~-----~ 77 (256)
T PRK09186 8 LITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLV-----ELDITDQESLEEFLSK-----S 77 (256)
T ss_pred EEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEE-----EecCCCHHHHHHHHHH-----H
Confidence 489999999999865332111 112344 7899999988885554 2
Q ss_pred ccc-CCCCEEEEcCcccCc-------ccCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCC
Q psy16545 62 RCT-HDIDCVIHFAAVKAV-------GESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPI 129 (600)
Q Consensus 62 ~~~-~~~d~Vih~A~~~~~-------~~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~ 129 (600)
.+. ..+|+|||||+.... ..........+++|+.++..+++++ ++.+.+++|++||.+.+..+. ...
T Consensus 78 ~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-~~~ 156 (256)
T PRK09186 78 AEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPK-FEI 156 (256)
T ss_pred HHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhcccc-chh
Confidence 221 248999999975421 1112345567889998888777665 445667999999975443221 122
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 130 TEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 130 ~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.|..+. .....|+.||.+.+.+++.++.+. .++++++++||.++++
T Consensus 157 ~~~~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~ 204 (256)
T PRK09186 157 YEGTSM-TSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDN 204 (256)
T ss_pred cccccc-CCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCC
Confidence 233333 334579999999999999888764 3799999999988765
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=8.8e-10 Score=108.92 Aligned_cols=148 Identities=16% Similarity=0.093 Sum_probs=107.1
Q ss_pred cCCCCcchHHHHHHHhhhcc--------------------------CCCccEEecccccccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVT--------------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~--------------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
-|||++|.+|+.+.+..... +..++++ .+|+++.+++.+++++ +
T Consensus 6 lItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~D~~~~~~~~~~~~~-----~ 75 (248)
T PRK08251 6 LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVA-----ALDVNDHDQVFEVFAE-----F 75 (248)
T ss_pred EEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEE-----EcCCCCHHHHHHHHHH-----H
Confidence 37999999999885432111 1123445 7899999888875554 3
Q ss_pred ccc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCcccc-CCCCCCCCCC
Q psy16545 62 RCT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVY-GEPQFLPITE 131 (600)
Q Consensus 62 ~~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vy-g~~~~~~~~E 131 (600)
... .++|+|||+||...... ........+++|+.++.++++++. +.+.+++|++||.... |.
T Consensus 76 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------- 147 (248)
T PRK08251 76 RDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL-------- 147 (248)
T ss_pred HHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC--------
Confidence 222 26999999999864322 123345688999999999998874 4466799999996543 31
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 132 DHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 132 ~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+ .+.+.|+.||.+.+.+++.+..+. .++++++++||.+.++.
T Consensus 148 ---~-~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~ 191 (248)
T PRK08251 148 ---P-GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEM 191 (248)
T ss_pred ---C-CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchh
Confidence 1 245789999999999999888765 37999999999998874
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.6e-10 Score=111.02 Aligned_cols=150 Identities=15% Similarity=0.108 Sum_probs=105.9
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCCE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDIDC 69 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~ 69 (600)
|||++|.+|..+.+.. ...+.+++.++|+ .+|+.+.+++.+..++ +.+. .++|+
T Consensus 5 ItGasg~iG~~la~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~-----~~~~~~~id~ 77 (248)
T PRK10538 5 VTGATAGFGECITRRF--IQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLAS-----LPAEWRNIDV 77 (248)
T ss_pred EECCCchHHHHHHHHH--HHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHH-----HHHHcCCCCE
Confidence 7999999999986532 2222233322221 6899999888774443 2222 26999
Q ss_pred EEEcCcccCc-----ccCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 70 VIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 70 Vih~A~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
|||+||.... ....+++...+++|+.++..+++++ ++.+.+++|++||...+. +. .+.+
T Consensus 78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~-~~~~ 145 (248)
T PRK10538 78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----------PY-AGGN 145 (248)
T ss_pred EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC-----------CC-CCCc
Confidence 9999997421 1123455678999999977776665 455667999999975431 22 4567
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.|+.||.+.+.+.+.++.+. .++++.+++||.+.|+.
T Consensus 146 ~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~ 184 (248)
T PRK10538 146 VYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTE 184 (248)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence 99999999999999998765 37999999999998774
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.8e-10 Score=112.64 Aligned_cols=150 Identities=15% Similarity=0.093 Sum_probs=108.1
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhccccccc-CCCCEEEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIH 72 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih 72 (600)
|||++|.+|+.+.+.. ...+.+++.++|+ .+|+++.+++.+++++ +.+. .++|+|||
T Consensus 6 ItGasggiG~~la~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~~~id~vi~ 78 (274)
T PRK05693 6 ITGCSSGIGRALADAF--KAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEE-----LEAEHGGLDVLIN 78 (274)
T ss_pred EecCCChHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHH-----HHHhcCCCCEEEE
Confidence 7999999999996533 2334444444443 5799999888875544 3222 26999999
Q ss_pred cCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH---cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHH
Q psy16545 73 FAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS---HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKT 145 (600)
Q Consensus 73 ~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~---~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~s 145 (600)
+||...... ..++....+++|+.++.++++++.. .+.+++|++||...+.. . ...++|+.|
T Consensus 79 ~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~~~Y~~s 146 (274)
T PRK05693 79 NAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLV-----------T-PFAGAYCAS 146 (274)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCC-----------C-CCccHHHHH
Confidence 999754322 2245567899999999999998743 23468999999643321 1 345789999
Q ss_pred HHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 146 KHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 146 K~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
|.+.+.+++.++.+. .|+++++++||.+..+.
T Consensus 147 K~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~ 180 (274)
T PRK05693 147 KAAVHALSDALRLELAPFGVQVMEVQPGAIASQF 180 (274)
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence 999999998887663 38999999999998763
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.9e-10 Score=111.10 Aligned_cols=151 Identities=15% Similarity=0.058 Sum_probs=108.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------cccccChHHhhhHHhhhhccccccc-CCCCEEEEc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHF 73 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~ 73 (600)
-|||++|.+|+.+.+... ..+..++.++|+ .+|+.+.+++.+++++ +.+. .++|+||||
T Consensus 10 lItGas~gIG~~la~~l~--~~g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~id~vi~~ 82 (252)
T PRK07856 10 LVTGGTRGIGAGIARAFL--AAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDA-----IVERHGRLDVLVNN 82 (252)
T ss_pred EEeCCCchHHHHHHHHHH--HCCCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHH-----HHHHcCCCCEEEEC
Confidence 589999999999965432 222222222221 6899999988885554 3322 258999999
Q ss_pred CcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----c-CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHH
Q psy16545 74 AAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----H-GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGK 144 (600)
Q Consensus 74 A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~-~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~ 144 (600)
||...... ...++...+++|+.++..+++++.+ . +..++|++||...+. +. ...+.|+.
T Consensus 83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~-----------~~-~~~~~Y~~ 150 (252)
T PRK07856 83 AGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR-----------PS-PGTAAYGA 150 (252)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC-----------CC-CCCchhHH
Confidence 99753221 2234567899999999999998754 2 346899999975432 22 45688999
Q ss_pred HHHHHHHHHHHHHhhc-CCceEEEEecccccCCC
Q psy16545 145 TKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 145 sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~ 177 (600)
||.+.+.+++.++.++ +.++++.++||.+..+.
T Consensus 151 sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~ 184 (252)
T PRK07856 151 AKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQ 184 (252)
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEEEeccccChH
Confidence 9999999999999876 34899999999998774
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.3e-10 Score=113.26 Aligned_cols=151 Identities=13% Similarity=0.040 Sum_probs=108.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+.+.. ...+..++.++|+ .+|+.+.+++.+++++ +.+. .
T Consensus 14 lVtGas~giG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~-----~~~~~g 86 (278)
T PRK08277 14 VITGGGGVLGGAMAKEL--ARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQ-----ILEDFG 86 (278)
T ss_pred EEeCCCchHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH-----HHHHcC
Confidence 58999999999996533 2223333333322 6899998888775443 3222 2
Q ss_pred CCCEEEEcCcccCccc-------------------CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccC
Q psy16545 66 DIDCVIHFAAVKAVGE-------------------SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYG 122 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~-------------------~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg 122 (600)
++|+||||||...+.. ...++...+++|+.++..+++++ ++.+.+++|++||...+.
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~ 166 (278)
T PRK08277 87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT 166 (278)
T ss_pred CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence 6999999999653221 12345678999999999777665 344557899999987654
Q ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 123 EPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 123 ~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+. .+...|+.||.+.+.+++.++.++ .+++++.++||.+..+.
T Consensus 167 -----------~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~ 211 (278)
T PRK08277 167 -----------PL-TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ 211 (278)
T ss_pred -----------CC-CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence 22 456789999999999999998876 37999999999999884
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.7e-10 Score=111.92 Aligned_cols=150 Identities=14% Similarity=0.064 Sum_probs=105.9
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-CC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-HD 66 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~ 66 (600)
|||++|.+|+.+.+... ..+.+++.++|+ .+|+++.+++.++.++ +... .+
T Consensus 6 VtGasg~iG~~la~~l~--~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~~~ 78 (263)
T PRK06181 6 ITGASEGIGRALAVRLA--RAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEA-----AVARFGG 78 (263)
T ss_pred EecCCcHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-----HHHHcCC
Confidence 79999999998855322 122223322222 6799998887774443 2221 26
Q ss_pred CCEEEEcCcccCcccC-----CCChhhhHHhHHHHHHHHHHHHHH---cCCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGES-----MQEPLMYYKNNLIATINLLEVMKS---HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~~-----~~~~~~~~~~Nv~gt~~ll~a~~~---~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
+|+||||||....... .+.....+++|+.++.++++.+.+ .+.+++|++||...+.. . .+
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~-~~ 146 (263)
T PRK06181 79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTG-----------V-PT 146 (263)
T ss_pred CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCC-----------C-CC
Confidence 8999999997643221 122456799999999999999853 23468999999766542 2 45
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.|+.||.+.+.+++.++.+. .++++++++||.+..+.
T Consensus 147 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~ 187 (263)
T PRK06181 147 RSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDI 187 (263)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCc
Confidence 6899999999999998887653 38999999999998774
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.7e-10 Score=113.76 Aligned_cols=151 Identities=15% Similarity=0.132 Sum_probs=107.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+++... ..+..++.++|+ .+|+.|.+++.+++++ +.+. .
T Consensus 44 lItGasggIG~~la~~La--~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~~~~g 116 (293)
T PRK05866 44 LLTGASSGIGEAAAEQFA--RRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVAD-----VEKRIG 116 (293)
T ss_pred EEeCCCcHHHHHHHHHHH--HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-----HHHHcC
Confidence 589999999999965332 222233333332 5899999888885543 3222 2
Q ss_pred CCCEEEEcCcccCcccC------CCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGES------MQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~------~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
++|+||||||....... +.+....+++|+.|+.++++++. +.+..++|++||.+.++. +.
T Consensus 117 ~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~ 186 (293)
T PRK05866 117 GVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSE----------AS 186 (293)
T ss_pred CCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC----------CC
Confidence 68999999997643221 12345688999999999888753 556679999999765432 11
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+..+.|+.||.+.+.+++.++.++ .++++++++||.+-.+
T Consensus 187 -p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~ 228 (293)
T PRK05866 187 -PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATP 228 (293)
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCc
Confidence 345789999999999999987765 3899999999987766
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.4e-10 Score=111.98 Aligned_cols=153 Identities=11% Similarity=0.012 Sum_probs=109.0
Q ss_pred cccCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 6 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 6 ~~~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
.-.|||++|.+|..+.+... ..+.+++.++|+ .+|+.+++++.+++++ ..+.
T Consensus 7 ~vlItGasg~iG~~l~~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 79 (251)
T PRK07231 7 VAIVTGASSGIGEGIARRFA--AEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAA-----ALERF 79 (251)
T ss_pred EEEEECCCChHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH-----HHHHh
Confidence 34589999999998855322 112222222221 6899999988885443 2221
Q ss_pred CCCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
.++|+|||+||...... ..+++...+++|+.++..+++.+.+ .+.++||++||...+.. .
T Consensus 80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~ 148 (251)
T PRK07231 80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRP-----------R 148 (251)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCC-----------C
Confidence 26899999999753222 2244566899999998888877654 56679999999866542 2
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .+++++.++||.+.++.
T Consensus 149 -~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~ 191 (251)
T PRK07231 149 -PGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGL 191 (251)
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCc
Confidence 456889999999999999988765 28999999999997764
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.1e-10 Score=112.14 Aligned_cols=149 Identities=13% Similarity=0.028 Sum_probs=103.8
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
|||++|.+|..+.+... ..+..++.++++ .+|+++.+++.+++++ +.+.
T Consensus 7 ItG~~~~IG~~la~~l~--~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-----~~~~~ 79 (259)
T PRK12384 7 VIGGGQTLGAFLCHGLA--EEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRG-----VDEIF 79 (259)
T ss_pred EECCCcHHHHHHHHHHH--HCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHH-----HHHHc
Confidence 78999999998854221 112222222221 6799998888775544 3222
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cC-CCeEEEecCcc-ccCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG-VYQLVFSSSCT-VYGEPQFLPITEDHP 134 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~r~I~~SS~~-vyg~~~~~~~~E~~~ 134 (600)
.++|+|||+||...... ...++...+++|+.++.++++++.+ .+ -.++|++||.. .++.
T Consensus 80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~----------- 148 (259)
T PRK12384 80 GRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS----------- 148 (259)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC-----------
Confidence 26899999999764322 2234566889999999988887754 34 35899999853 3332
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...++|+.||++.+.+++.++.+. .+++++++|||.++++.
T Consensus 149 --~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~ 191 (259)
T PRK12384 149 --KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSP 191 (259)
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccch
Confidence 345789999999999999988653 38999999999998763
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.8e-10 Score=113.73 Aligned_cols=147 Identities=12% Similarity=0.064 Sum_probs=106.7
Q ss_pred cCCCCcchHHHHHHHhhhccC-----------------------CCccEEecccccccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-----------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-----------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|.+|+.+.+.....+ .+++++ .+|++|.+++.+++++ +.+.
T Consensus 22 lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~~~~~~~~-----~~~~ 91 (280)
T PLN02253 22 LVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFF-----HCDVTVEDDVSRAVDF-----TVDK 91 (280)
T ss_pred EEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEE-----EeecCCHHHHHHHHHH-----HHHH
Confidence 589999999999855322111 124455 7899999988875443 3222
Q ss_pred -CCCCEEEEcCcccCcc------cCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccc-cCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAVG------ESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTV-YGEPQFLPITED 132 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~v-yg~~~~~~~~E~ 132 (600)
.++|+||||||..... ...+++...+++|+.++.++++++.+ .+..++|++||... ++.
T Consensus 92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~--------- 162 (280)
T PLN02253 92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG--------- 162 (280)
T ss_pred hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC---------
Confidence 2599999999975421 12245677999999999999988754 23357899988643 332
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.....|+.||.+.+.+++.++.+. .++++..++||.+.++.
T Consensus 163 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~ 205 (280)
T PLN02253 163 ----LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTAL 205 (280)
T ss_pred ----CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence 234689999999999999998875 38999999999998874
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.9e-10 Score=110.81 Aligned_cols=120 Identities=20% Similarity=0.124 Sum_probs=90.8
Q ss_pred cccccChHHhhhHHhhhhccccccc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc----CCC
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----GVY 110 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~ 110 (600)
.+|+++.+++..++++ +.+. ..+|+|||+||...... ..++++..+++|+.++.++++++... +.+
T Consensus 73 ~~D~~~~~~~~~~~~~-----~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 147 (256)
T PRK12748 73 EIDLSQPYAPNRVFYA-----VSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGG 147 (256)
T ss_pred ECCCCCHHHHHHHHHH-----HHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCe
Confidence 7899998888775554 3332 25899999999754322 12345667999999999999998543 346
Q ss_pred eEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 111 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 111 r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
++|++||...++ +. .....|+.||.+.+.+++.++.+. .+++++.++||.+..+
T Consensus 148 ~iv~~ss~~~~~-----------~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~ 203 (256)
T PRK12748 148 RIINLTSGQSLG-----------PM-PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTG 203 (256)
T ss_pred EEEEECCccccC-----------CC-CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCC
Confidence 899999976554 22 355789999999999999988764 3899999999987765
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.2e-10 Score=110.85 Aligned_cols=151 Identities=14% Similarity=0.003 Sum_probs=108.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|+.+++++.++.+. +... .
T Consensus 9 lItGasg~iG~~l~~~l~--~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 81 (246)
T PRK05653 9 LVTGASRGIGRAIALRLA--ADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEA-----AVEAFG 81 (246)
T ss_pred EEECCCcHHHHHHHHHHH--HCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH-----HHHHhC
Confidence 589999999999965332 223333333332 4899999888774432 2111 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
.+|+|||+||...... ..+++...++.|+.++.++++++. +.+.+++|++||..... +. .
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~-----------~~-~ 149 (246)
T PRK05653 82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT-----------GN-P 149 (246)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc-----------CC-C
Confidence 5899999999864422 123345678999999999998884 45678999999974321 12 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+.|+.+|.+.+.+++.++++. .+++++++||+.++|+.
T Consensus 150 ~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~ 191 (246)
T PRK05653 150 GQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDM 191 (246)
T ss_pred CCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcc
Confidence 56789999999999999987654 38999999999999985
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.1e-10 Score=110.43 Aligned_cols=151 Identities=12% Similarity=0.032 Sum_probs=109.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------------cccccChHHhhhHHhhhhccccccc-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------------EGDIVSMYANTDLAQKELGWSARCT-HDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~ 67 (600)
.|||++|.+|+.+.+.. ...+.+++.++|+ .+|+.|.+++.+.+++ +.+. .++
T Consensus 11 lItGatg~iG~~la~~l--~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~~ 83 (239)
T PRK12828 11 AITGGFGGLGRATAAWL--AARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDE-----VNRQFGRL 83 (239)
T ss_pred EEECCCCcHhHHHHHHH--HHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHH-----HHHHhCCc
Confidence 58999999999996533 2233444444441 4789998888775443 3222 269
Q ss_pred CEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 68 d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
|+|||+|+...... ..++....+++|+.++.++++++. +.+.+++|++||...++. . .+.
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~-~~~ 151 (239)
T PRK12828 84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKA-----------G-PGM 151 (239)
T ss_pred CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccC-----------C-CCc
Confidence 99999999753211 123345678899999999998874 346789999999876653 2 356
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
..|+.+|.+.+.+++.++++. .+++++++|||.++++.
T Consensus 152 ~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~ 191 (239)
T PRK12828 152 GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPP 191 (239)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence 789999999999998887653 38999999999999883
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=7e-10 Score=109.99 Aligned_cols=151 Identities=15% Similarity=0.004 Sum_probs=106.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecc-cc---------------------cccccChHHhhhHHhhhhcccccc--
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEA-RR---------------------EGDIVSMYANTDLAQKELGWSARC-- 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~-~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~-- 63 (600)
-|||++|.+|..+++.. ...+..++..+ ++ .+|+.+.+++....++ +.+
T Consensus 8 lItGas~gIG~~ia~~l--~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 80 (252)
T PRK12747 8 LVTGASRGIGRAIAKRL--ANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSS-----LDNEL 80 (252)
T ss_pred EEeCCCChHHHHHHHHH--HHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHH-----HHHHh
Confidence 58999999999996633 33333333222 11 3578887776664443 221
Q ss_pred -----cCCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCC
Q psy16545 64 -----THDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITED 132 (600)
Q Consensus 64 -----~~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~ 132 (600)
..++|+||||||...... ..+++...+++|+.++..+++++.+. ...++|++||...+.
T Consensus 81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~---------- 150 (252)
T PRK12747 81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI---------- 150 (252)
T ss_pred hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc----------
Confidence 126999999999753221 12335668899999999999887653 235899999986543
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+. ...+.|+.||++.+.+++.++.++ .+++++.+.||.+.++.
T Consensus 151 -~~-~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~ 195 (252)
T PRK12747 151 -SL-PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDM 195 (252)
T ss_pred -CC-CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCch
Confidence 22 355789999999999999998775 38999999999998884
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=7.3e-10 Score=113.51 Aligned_cols=158 Identities=13% Similarity=0.061 Sum_probs=112.4
Q ss_pred cCCCCcchHHHHHHHhhhccC--------------------------CCccEEecccccccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG--------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~--------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
-|||+++.+|..+++.....+ ..+.++ .+|+.+.+++.+++++ +
T Consensus 18 lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~-----~~Dl~d~~sv~~~~~~-----~ 87 (313)
T PRK05854 18 VVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLR-----ALDLSSLASVAALGEQ-----L 87 (313)
T ss_pred EEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEE-----EecCCCHHHHHHHHHH-----H
Confidence 489999999998854222111 124455 7899999999887665 4
Q ss_pred ccc-CCCCEEEEcCcccCcc---cCCCChhhhHHhHHHHHHHHHHHHHH---cCCCeEEEecCcccc-CCCCCCCCCCCC
Q psy16545 62 RCT-HDIDCVIHFAAVKAVG---ESMQEPLMYYKNNLIATINLLEVMKS---HGVYQLVFSSSCTVY-GEPQFLPITEDH 133 (600)
Q Consensus 62 ~~~-~~~d~Vih~A~~~~~~---~~~~~~~~~~~~Nv~gt~~ll~a~~~---~~~~r~I~~SS~~vy-g~~~~~~~~E~~ 133 (600)
.+. .++|++|||||..... ...+..+..+++|+.|+..|++.+.. .+..++|++||...+ +.....++.+..
T Consensus 88 ~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~ 167 (313)
T PRK05854 88 RAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWER 167 (313)
T ss_pred HHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccc
Confidence 332 2599999999986432 23356777899999999988887653 233589999997543 322223344444
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc----CCceEEEEecccccCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH----KEWNIISLRYFNPVGA 176 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~~~v~G~ 176 (600)
+. .+...|+.||++.+.+.++++.+. .++.++.+.||.|-.+
T Consensus 168 ~~-~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 168 SY-AGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred cC-cchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence 55 567889999999999999997642 3799999999998765
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.1e-10 Score=110.34 Aligned_cols=149 Identities=13% Similarity=0.019 Sum_probs=109.1
Q ss_pred ccCCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHHhhhHHhhhhccccccc-CCCCE
Q psy16545 7 NLGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYANTDLAQKELGWSARCT-HDIDC 69 (600)
Q Consensus 7 ~~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~ 69 (600)
-.|||++|.+|+.+.+... ..+.+++.++|+ .+|+++.+++.+ +++. ..+|+
T Consensus 12 ~lItGa~g~iG~~~a~~l~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~---------~~~~~~~~d~ 80 (245)
T PRK07060 12 VLVTGASSGIGRACAVALA--QRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRA---------ALAAAGAFDG 80 (245)
T ss_pred EEEeCCcchHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHH---------HHHHhCCCCE
Confidence 3589999999999965432 233344444442 478888887777 3332 25899
Q ss_pred EEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc----C-CCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 70 VIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G-VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 70 Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
|||+||...... ...++...+++|+.++.++++++.+. + .++||++||...+.. . .+.+
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~-~~~~ 148 (245)
T PRK07060 81 LVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVG-----------L-PDHL 148 (245)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCC-----------C-CCCc
Confidence 999999864321 22345567889999999999988653 2 368999999765432 2 4557
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAHP 178 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~ 178 (600)
.|+.||.+++.+++.+++++ .+++++.+|||.++++..
T Consensus 149 ~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~ 188 (245)
T PRK07060 149 AYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMA 188 (245)
T ss_pred HhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchh
Confidence 89999999999999998764 379999999999999853
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.8e-10 Score=110.67 Aligned_cols=151 Identities=15% Similarity=0.046 Sum_probs=107.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|+.+++++.+++++ +.++.
T Consensus 10 lItGas~giG~~ia~~l--~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 82 (254)
T PRK07478 10 IITGASSGIGRAAAKLF--AREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVAL-----AVERFG 82 (254)
T ss_pred EEeCCCChHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH-----HHHhcC
Confidence 58999999999985532 2222222222221 6899999988886655 43332
Q ss_pred CCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|++||+||...... ..+++...+++|+.++..+++++ ++.+.+++|++||...+.. +.
T Consensus 83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~----------~~- 151 (254)
T PRK07478 83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA----------GF- 151 (254)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc----------CC-
Confidence 6999999999753211 22346678999999988887664 4455568999999765431 12
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.....|+.||.+.+.+++.++.+. .+++++.++||.+-.+
T Consensus 152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 193 (254)
T PRK07478 152 PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTP 193 (254)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCc
Confidence 456789999999999999998875 2799999999999776
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.5e-10 Score=109.89 Aligned_cols=151 Identities=13% Similarity=0.008 Sum_probs=107.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
.|||++|.+|+.+.+.. .+.+.+++.++|+ .+|+++.+++.+++++ +.+. .
T Consensus 10 lItG~sg~iG~~la~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 82 (241)
T PRK07454 10 LITGASSGIGKATALAF--AKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAE-----LLEQFG 82 (241)
T ss_pred EEeCCCchHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHH-----HHHHcC
Confidence 58999999999985532 2222222222221 6899999888774443 3322 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|+|||+||...... ...+....+++|+.++.++++++. +.+.+++|++||...++. . .
T Consensus 83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~-~ 150 (241)
T PRK07454 83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNA-----------F-P 150 (241)
T ss_pred CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcC-----------C-C
Confidence 5999999999754321 223456689999999999887763 345578999999876642 2 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.++|+.+|.+.+.+++.++.+. .+++++++|||.+-.+.
T Consensus 151 ~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~ 192 (241)
T PRK07454 151 QWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPL 192 (241)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCc
Confidence 56789999999999998887553 38999999999998774
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.4e-10 Score=110.37 Aligned_cols=151 Identities=12% Similarity=-0.018 Sum_probs=109.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+.+.. ...+.+++..+|+ .+|+++.+++.+++++ +.+. .
T Consensus 13 lItGas~giG~~ia~~L--~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~~ 85 (254)
T PRK08085 13 LITGSAQGIGFLLATGL--AEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEH-----IEKDIG 85 (254)
T ss_pred EEECCCChHHHHHHHHH--HHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHH-----HHHhcC
Confidence 58999999999985432 2222333333322 5799999888885544 3322 2
Q ss_pred CCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
.+|+|||+||..... ...+++...+++|+.++..+++++.+ .+.+++|++||..... +. .
T Consensus 86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~-~ 153 (254)
T PRK08085 86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL-----------GR-D 153 (254)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc-----------CC-C
Confidence 589999999975321 12345667899999999999988754 3456899999974321 12 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+.|+.+|.+.+.+++.++.+. .+++++.++||.+..+.
T Consensus 154 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~ 195 (254)
T PRK08085 154 TITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEM 195 (254)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcc
Confidence 56789999999999999998775 38999999999999885
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.1e-10 Score=112.34 Aligned_cols=151 Identities=12% Similarity=-0.008 Sum_probs=105.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------------cccccChHHhhhHHhhhhccccccc-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------------EGDIVSMYANTDLAQKELGWSARCT-HDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~ 67 (600)
.|||++|.+|+.+.+... ..+.+++.++|+ .+|+++++++.++.++ +.+. .++
T Consensus 15 lItGa~g~iG~~~a~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~~ 87 (264)
T PRK12829 15 LVTGGASGIGRAIAEAFA--EAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDT-----AVERFGGL 87 (264)
T ss_pred EEeCCCCcHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHH-----HHHHhCCC
Confidence 689999999999855332 122222222221 6799998887774332 2111 269
Q ss_pred CEEEEcCcccCcc-----cCCCChhhhHHhHHHHHHHHHHHHHH----cCC-CeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVMKS----HGV-YQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 68 d~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~-~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
|+|||+||..... ...+++...+++|+.++.++++++.+ .+. ++++++||..... +. +
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~-----------~~-~ 155 (264)
T PRK12829 88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL-----------GY-P 155 (264)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc-----------CC-C
Confidence 9999999986221 12244567899999999999998743 344 5688888754321 11 3
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+.|+.+|.+.+.+++.++++. .+++++++|||+++||.
T Consensus 156 ~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~ 197 (264)
T PRK12829 156 GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPR 197 (264)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChH
Confidence 45689999999999999988664 38999999999999985
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.2e-10 Score=110.59 Aligned_cols=149 Identities=15% Similarity=-0.031 Sum_probs=106.7
Q ss_pred cCCCCcchHHHHHHHhhhccCC-------------------CccEEecccccccccChHHhhhHHhhhhccccccc-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGK-------------------PVPYIVEARREGDIVSMYANTDLAQKELGWSARCT-HDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~-------------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~ 67 (600)
-|||++|.+|+.+++.....+. ++.++ .+|+++++++.+++++ +.+. .++
T Consensus 11 lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~-----~~Dl~~~~~~~~~~~~-----~~~~~~~i 80 (255)
T PRK06463 11 LITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTI-----KCDVGNRDQVKKSKEV-----VEKEFGRV 80 (255)
T ss_pred EEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEE-----EecCCCHHHHHHHHHH-----HHHHcCCC
Confidence 5899999999998653321111 23344 6899999998885554 3322 259
Q ss_pred CEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 68 d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
|+||||||..... ....++...+++|+.++..+++++ ++.+.+++|++||...++. +. ...
T Consensus 81 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~----------~~-~~~ 149 (255)
T PRK06463 81 DVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGT----------AA-EGT 149 (255)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCC----------CC-CCc
Confidence 9999999985321 122445678999999977765554 4445579999999876642 11 345
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.|+.||.+.+.+++.++.+. .+++++.++||.+-.+.
T Consensus 150 ~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~ 189 (255)
T PRK06463 150 TFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDM 189 (255)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCch
Confidence 789999999999999998765 38999999999886653
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.4e-10 Score=111.71 Aligned_cols=148 Identities=10% Similarity=-0.004 Sum_probs=106.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------cccccChHHhhhHHhhhhccccccc-CCCCEEEEcC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFA 74 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A 74 (600)
-|||++|.+|..+.+.. ...+..++.++++ .+|+++++++.+++++ +.+. ..+|+|||+|
T Consensus 13 lItG~s~gIG~~la~~l--~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g~id~li~~A 85 (266)
T PRK06171 13 IVTGGSSGIGLAIVKEL--LANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAE-----IIEKFGRIDGLVNNA 85 (266)
T ss_pred EEeCCCChHHHHHHHHH--HHCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHH-----HHHHcCCCCEEEECC
Confidence 58999999999996533 2223333333322 5899999988885554 3332 2589999999
Q ss_pred cccCcc-------------cCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 75 AVKAVG-------------ESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 75 ~~~~~~-------------~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
|..... ...+++...+++|+.++..+++++.+ .+..++|++||...+.. . .
T Consensus 86 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~ 153 (266)
T PRK06171 86 GINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEG-----------S-E 153 (266)
T ss_pred cccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCC-----------C-C
Confidence 975321 12234566899999999999988864 33458999999754421 1 3
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEeccccc
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPV 174 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~ 174 (600)
..+.|+.||.+.+.+++.++.++ .++++++++||.+-
T Consensus 154 ~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 154 GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 56789999999999999998775 38999999999874
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.6e-10 Score=110.92 Aligned_cols=150 Identities=14% Similarity=0.045 Sum_probs=107.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|++|.++.+... ..+.+++.++|+ .+|+++++++.+++++ +.+. .
T Consensus 14 lItGasggIG~~~a~~l~--~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 86 (263)
T PRK07814 14 VVTGAGRGLGAAIALAFA--EAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQ-----AVEAFG 86 (263)
T ss_pred EEECCCChHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-----HHHHcC
Confidence 689999999999865332 222233333321 6899999888775444 3222 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH-----cCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS-----HGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~-----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|+|||+||...... ..+++...+++|+.++.++++++.+ .+.+++|++||..... +.
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~- 154 (263)
T PRK07814 87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL-----------AG- 154 (263)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-----------CC-
Confidence 6999999999753321 2245667899999999999999864 3456899999963221 22
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc-CCceEEEEecccccCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGA 176 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~ 176 (600)
.+.++|+.||.+++.+++.++.+. ++++++.++||.+..+
T Consensus 155 ~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~ 195 (263)
T PRK07814 155 RGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTS 195 (263)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCc
Confidence 456899999999999999998875 3688999999988766
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=7.7e-10 Score=110.05 Aligned_cols=148 Identities=12% Similarity=0.027 Sum_probs=107.8
Q ss_pred cCCCCcchHHHHHHHhhhcc-----------------------CCCccEEecccccccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVT-----------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~-----------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
.|||++|.+|+.+++..... +.++.++ .+|+++.+++.++.++ +.+.
T Consensus 11 lItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-----~~D~~~~~~~~~~~~~-----~~~~ 80 (258)
T PRK08628 11 IVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFV-----QVDLTDDAQCRDAVEQ-----TVAK 80 (258)
T ss_pred EEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEE-----EccCCCHHHHHHHHHH-----HHHh
Confidence 58999999999985432211 1134555 7899999988875544 3332
Q ss_pred C-CCCEEEEcCcccCccc---CCCChhhhHHhHHHHHHHHHHHHHH---cCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 65 H-DIDCVIHFAAVKAVGE---SMQEPLMYYKNNLIATINLLEVMKS---HGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 65 ~-~~d~Vih~A~~~~~~~---~~~~~~~~~~~Nv~gt~~ll~a~~~---~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
. .+|+|||+||...... ..+++...+++|+.++.++++++.+ .+.++||++||...+. +. .
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~-~ 148 (258)
T PRK08628 81 FGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALT-----------GQ-G 148 (258)
T ss_pred cCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhcc-----------CC-C
Confidence 2 5899999999653211 1134566899999999999988754 2346899999975432 12 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+...|+.||.+.+.+++.++++. .+++++.++||.+++|.
T Consensus 149 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~ 190 (258)
T PRK08628 149 GTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL 190 (258)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence 56899999999999999998753 38999999999999984
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.12 E-value=7.2e-10 Score=104.65 Aligned_cols=149 Identities=14% Similarity=0.064 Sum_probs=109.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------------cccccChHHhhhHHhhhhcccccccC-CC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------------EGDIVSMYANTDLAQKELGWSARCTH-DI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~ 67 (600)
-|||+++.+|+..++. +...+.+++...|+ ..|++|.+++.++.++ +.+++ ++
T Consensus 10 lITGASSGiG~A~A~~--l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~-----~~~~~g~i 82 (246)
T COG4221 10 LITGASSGIGEATARA--LAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEA-----LPEEFGRI 82 (246)
T ss_pred EEecCcchHHHHHHHH--HHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHH-----HHHhhCcc
Confidence 4799999999888542 22233333333333 6799999997776655 44444 49
Q ss_pred CEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccc-cCCCCCCCCCCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTV-YGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 68 d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~v-yg~~~~~~~~E~~~~~~p 138 (600)
|++|||||...... ..+++..++++|+.|..+..++. .+++...+|.+||.+. |. - +.
T Consensus 83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~------------y-~~ 149 (246)
T COG4221 83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYP------------Y-PG 149 (246)
T ss_pred cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccccc------------C-CC
Confidence 99999999874321 23567889999999999998885 4555669999999742 22 1 34
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+.|+.+|++...+.+.+.++. .+++++.+-||.|-..
T Consensus 150 ~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~ 189 (246)
T COG4221 150 GAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETT 189 (246)
T ss_pred CccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecce
Confidence 5889999999999999988776 5899999999988554
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.1e-10 Score=113.23 Aligned_cols=151 Identities=16% Similarity=0.041 Sum_probs=107.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|++|..+.+... ..+.+++.++|+ .+|+.+++++.++.++ +.+.
T Consensus 11 lItGasg~IG~~la~~l~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~ 83 (276)
T PRK05875 11 LVTGGGSGIGKGVAAGLV--AAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDA-----ATAW 83 (276)
T ss_pred EEECCCcHHHHHHHHHHH--HCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHH-----HHHH
Confidence 589999999999955322 122222222221 5799998888774443 3221
Q ss_pred -CCCCEEEEcCcccCcc-----cCCCChhhhHHhHHHHHHHHHHHHHHc----CCCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVMKSH----GVYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
.++|+|||+||..... ...+++...+++|+.++.++++++.+. +.+++|++||...+..
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~----------- 152 (276)
T PRK05875 84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT----------- 152 (276)
T ss_pred cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC-----------
Confidence 2689999999965321 122345668899999999999877543 3458999999865432
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. ++.++|+.+|.+.|.+++.+.++. .+++++++|||.+.++.
T Consensus 153 ~-~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~ 196 (276)
T PRK05875 153 H-RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDL 196 (276)
T ss_pred C-CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcc
Confidence 2 456899999999999999998775 37999999999998774
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.5e-10 Score=109.52 Aligned_cols=151 Identities=14% Similarity=0.010 Sum_probs=107.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
.|||++|.+|+.+++... ..+.+++.++++ .+|+.+.+++.+++++ +.+.
T Consensus 6 lItG~s~~iG~~la~~l~--~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~~ 78 (245)
T PRK12824 6 LVTGAKRGIGSAIARELL--NDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAE-----IEEEE 78 (245)
T ss_pred EEeCCCchHHHHHHHHHH--HcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH-----HHHHc
Confidence 378999999999865332 112222222221 6899999888775544 3222
Q ss_pred CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
..+|+|||+||..... ...+++...+++|+.++.++++++ ++.+.+++|++||...+.. .
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~- 146 (245)
T PRK12824 79 GPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKG-----------Q- 146 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccC-----------C-
Confidence 2599999999976421 223456678899999999986654 5556679999999765532 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.....|+.||.+.+.+++.++.+. .++++++++||.+.++.
T Consensus 147 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 189 (245)
T PRK12824 147 FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPM 189 (245)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcc
Confidence 345789999999999998887653 38999999999998874
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.7e-10 Score=110.44 Aligned_cols=150 Identities=12% Similarity=0.046 Sum_probs=106.5
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc------------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
|||++|.+|.++.+... ..+.+++.++++ .+|+++.+++.++.++ +.+.
T Consensus 4 VtG~~~~iG~~~a~~l~--~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~ 76 (251)
T PRK07069 4 ITGAAGGLGRAIARRMA--EQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQ-----AADA 76 (251)
T ss_pred EECCCChHHHHHHHHHH--HCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHH-----HHHH
Confidence 78999999999865332 223333333332 4688888888775443 3222
Q ss_pred -CCCCEEEEcCcccCccc----CCCChhhhHHhHHH----HHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLI----ATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~----gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
.++|+|||+||...... ..++....+++|+. ++..++.++++.+.+++|++||...+.. .
T Consensus 77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~-----------~ 145 (251)
T PRK07069 77 MGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKA-----------E 145 (251)
T ss_pred cCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccC-----------C
Confidence 25899999999864322 12344567889998 6677777777777789999999876542 1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc----CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH----KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~~~v~G~~ 177 (600)
...+.|+.+|.+.+.+++.++.+. .+++++.++||.+.+|.
T Consensus 146 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~ 190 (251)
T PRK07069 146 -PDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGI 190 (251)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcc
Confidence 345789999999999999887663 25899999999999885
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.6e-10 Score=104.88 Aligned_cols=132 Identities=29% Similarity=0.256 Sum_probs=99.6
Q ss_pred CCCCcchHHHHHHHhhhcc----------------CCCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEE
Q psy16545 9 GTGQGTSVLQLLRTFERVT----------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIH 72 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~----------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih 72 (600)
|+|++|++|+.+.+..... ..+++.+ .+|+.|.+++.+ ++. ++|+|||
T Consensus 3 V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~-----~~d~~d~~~~~~---------al~--~~d~vi~ 66 (183)
T PF13460_consen 3 VFGATGFVGRALAKQLLRRGHEVTALVRSPSKAEDSPGVEII-----QGDLFDPDSVKA---------ALK--GADAVIH 66 (183)
T ss_dssp EETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEE-----ESCTTCHHHHHH---------HHT--TSSEEEE
T ss_pred EECCCChHHHHHHHHHHHCCCEEEEEecCchhcccccccccc-----eeeehhhhhhhh---------hhh--hcchhhh
Confidence 7899999999995533211 2345555 689999999998 777 8999999
Q ss_pred cCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q psy16545 73 FAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEM 152 (600)
Q Consensus 73 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~ 152 (600)
+++.... +...+.+++++|++.+++++|++||.++|+........+..+ ....|...|..+|+.
T Consensus 67 ~~~~~~~-------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~e~~ 130 (183)
T PF13460_consen 67 AAGPPPK-------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKP---IFPEYARDKREAEEA 130 (183)
T ss_dssp CCHSTTT-------------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCG---GGHHHHHHHHHHHHH
T ss_pred hhhhhcc-------------cccccccccccccccccccceeeeccccCCCCCccccccccc---chhhhHHHHHHHHHH
Confidence 9965421 167789999999999999999999999988533211111111 225788889888887
Q ss_pred HHHHHhhcCCceEEEEecccccCCC
Q psy16545 153 LKDLSKAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 153 ~~~~~~~~~~~~~~ilR~~~v~G~~ 177 (600)
++. . +++++++||+.+||+.
T Consensus 131 ~~~----~-~~~~~ivrp~~~~~~~ 150 (183)
T PF13460_consen 131 LRE----S-GLNWTIVRPGWIYGNP 150 (183)
T ss_dssp HHH----S-TSEEEEEEESEEEBTT
T ss_pred HHh----c-CCCEEEEECcEeEeCC
Confidence 743 2 8999999999999995
|
... |
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.5e-10 Score=112.37 Aligned_cols=189 Identities=15% Similarity=0.072 Sum_probs=119.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhccccccc--CCCCEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCT--HDIDCV 70 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~--~~~d~V 70 (600)
-|||++|.+|+.+.+... ..+.++++++|+ .+|+.+.+++.+++++ +... ..+|.+
T Consensus 6 lVtGasg~IG~~la~~l~--~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----i~~~~~~~~~~i 78 (256)
T PRK08017 6 LITGCSSGIGLEAALELK--RRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADE-----VIALTDNRLYGL 78 (256)
T ss_pred EEECCCChHHHHHHHHHH--HCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHH-----HHHhcCCCCeEE
Confidence 489999999999965432 222233333332 6788888877664443 3221 358999
Q ss_pred EEcCcccCccc----CCCChhhhHHhHHHHHHHH----HHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChH
Q psy16545 71 IHFAAVKAVGE----SMQEPLMYYKNNLIATINL----LEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVY 142 (600)
Q Consensus 71 ih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~l----l~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y 142 (600)
||+||...... ..++....+++|+.|+.++ ++++++.+.+++|++||...+. +. ...++|
T Consensus 79 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~-~~~~~Y 146 (256)
T PRK08017 79 FNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI-----------ST-PGRGAY 146 (256)
T ss_pred EECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc-----------CC-CCccHH
Confidence 99999753211 2234567899999999886 5556667778999999963321 12 456889
Q ss_pred HHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccC
Q psy16545 143 GKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDG 220 (600)
Q Consensus 143 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~ 220 (600)
+.||...|.+.+.++.+. .+++++++|||.+..+. ...+... . ...++...+...|.+
T Consensus 147 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~----------------~~~~~~~---~-~~~~~~~~~~~~~~~ 206 (256)
T PRK08017 147 AASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRF----------------TDNVNQT---Q-SDKPVENPGIAARFT 206 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccch----------------hhcccch---h-hccchhhhHHHhhcC
Confidence 999999999888765432 38999999998765442 1111110 0 011122334445667
Q ss_pred cceEEeeeccccccc
Q psy16545 221 TGKVVAIDNFVNSVH 235 (600)
Q Consensus 221 ~~v~d~v~~~~~a~~ 235 (600)
++.+|+++.+...+.
T Consensus 207 ~~~~d~a~~~~~~~~ 221 (256)
T PRK08017 207 LGPEAVVPKLRHALE 221 (256)
T ss_pred CCHHHHHHHHHHHHh
Confidence 888887776665543
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.11 E-value=7e-10 Score=110.21 Aligned_cols=150 Identities=12% Similarity=0.031 Sum_probs=105.7
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-CC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-HD 66 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~ 66 (600)
|||++|++|..+.+.. ...+.+++.++|+ .+|+++++++.+++++ +.+. .+
T Consensus 7 ItGas~giG~~la~~l--~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~~~ 79 (256)
T PRK08643 7 VTGAGQGIGFAIAKRL--VEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQ-----VVDTFGD 79 (256)
T ss_pred EECCCChHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH-----HHHHcCC
Confidence 7899999999986533 2223333333332 6899999988875544 3322 25
Q ss_pred CCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc----C-CCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G-VYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
+|+||||||...... ..++.+..+++|+.++..+++++.+. + ..++|++||...+.. . .
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~-~ 147 (256)
T PRK08643 80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVG-----------N-P 147 (256)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccC-----------C-C
Confidence 999999998753221 12345668999999999888777542 2 258999999643221 1 3
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
..+.|+.||.+.+.+++.++++. .|++++.++||.+.+|.
T Consensus 148 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~ 189 (256)
T PRK08643 148 ELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPM 189 (256)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence 45789999999999999998765 38999999999998874
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.6e-10 Score=110.27 Aligned_cols=148 Identities=14% Similarity=0.070 Sum_probs=104.3
Q ss_pred cCCCCcchHHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
-|||++|++|..+.+.....+ .++.++ .+|+++.+++.++.++ +.
T Consensus 6 lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~Dl~~~~~~~~~~~~-----~~ 75 (248)
T PRK06123 6 IITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAV-----AADVADEADVLRLFEA-----VD 75 (248)
T ss_pred EEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEE-----EeccCCHHHHHHHHHH-----HH
Confidence 479999999988854221111 123345 7899998888875443 22
Q ss_pred cc-CCCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHHcC-------CCeEEEecCccc-cCCCCCCC
Q psy16545 63 CT-HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSHG-------VYQLVFSSSCTV-YGEPQFLP 128 (600)
Q Consensus 63 ~~-~~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~~-------~~r~I~~SS~~v-yg~~~~~~ 128 (600)
+. ..+|+|||+||...... ..+++...+++|+.++.++++++.+.- -.++|++||... ++..
T Consensus 76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---- 151 (248)
T PRK06123 76 RELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP---- 151 (248)
T ss_pred HHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC----
Confidence 21 25899999999864321 223455789999999999988875431 136999999743 4321
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 129 ITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 129 ~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.....|+.||.+.+.+++.++.+. .+++++++|||.++||.
T Consensus 152 --------~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~ 194 (248)
T PRK06123 152 --------GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEI 194 (248)
T ss_pred --------CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCch
Confidence 112469999999999999988764 38999999999999984
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=8.7e-10 Score=109.83 Aligned_cols=146 Identities=13% Similarity=0.045 Sum_probs=106.1
Q ss_pred CCCCcchHHHHHHHhhhcc----------------------CCCccEEecccccccccChHHhhhHHhhhhcccccc--c
Q psy16545 9 GTGQGTSVLQLLRTFERVT----------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARC--T 64 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~----------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~--~ 64 (600)
|||++|.+|+.+.+..... +..++++ .+|+++.+++.++.+. +.+ .
T Consensus 6 ItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~~D~~~~~~v~~~~~~-----~~~~~~ 75 (260)
T PRK08267 6 ITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTG-----ALDVTDRAAWDAALAD-----FAAATG 75 (260)
T ss_pred EeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEE-----EecCCCHHHHHHHHHH-----HHHHcC
Confidence 7999999999996532211 1124445 7899999888874443 222 1
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCcc-ccCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCT-VYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~-vyg~~~~~~~~E~~~~ 135 (600)
.++|+||||||...... ..++....+++|+.++.++++++.+ .+..++|++||.. .+|.
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------ 143 (260)
T PRK08267 76 GRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQ------------ 143 (260)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC------------
Confidence 36899999999865322 2234567899999999999988743 3456899999964 3442
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...+.|+.||.+.+.+++.++.+. .++++++++||.+-.+.
T Consensus 144 -~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~ 186 (260)
T PRK08267 144 -PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAM 186 (260)
T ss_pred -CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcc
Confidence 345789999999999999988664 37999999999987653
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=8.8e-10 Score=108.29 Aligned_cols=151 Identities=15% Similarity=0.102 Sum_probs=106.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|..+.+... ..+.+++.++|+ .+|+++++++.++.++ +.+. .
T Consensus 11 lVtG~sg~iG~~l~~~L~--~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 83 (239)
T PRK07666 11 LITGAGRGIGRAVAIALA--KEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQ-----LKNELG 83 (239)
T ss_pred EEEcCCchHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHH-----HHHHcC
Confidence 589999999999865322 222233322221 6889998888774443 2221 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|+|||+||...... ..++....+++|+.++.++++++.. .+.+++|++||...+.. . .
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~-~ 151 (239)
T PRK07666 84 SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKG-----------A-A 151 (239)
T ss_pred CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccC-----------C-C
Confidence 6999999999764321 2234456899999999999988753 45678999999754432 1 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+...|+.+|.+.+.+++.++.+. .+++++++|||.+..+.
T Consensus 152 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~ 193 (239)
T PRK07666 152 VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDM 193 (239)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcc
Confidence 56789999999999998887653 38999999999998874
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=8.4e-10 Score=108.87 Aligned_cols=148 Identities=11% Similarity=-0.029 Sum_probs=103.4
Q ss_pred CCCCcchHHHHHHHhhhccCC-------------------------CccEEecccccccccChHHhhhHHhhhhcccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGK-------------------------PVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~-------------------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
|||++|++|..+.+.....+. .+.++ .+|+.|.+++.++.++ +.+
T Consensus 6 ItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~D~~d~~~i~~~~~~-----~~~ 75 (247)
T PRK09730 6 VTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVL-----QADISDENQVVAMFTA-----IDQ 75 (247)
T ss_pred EeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEE-----EccCCCHHHHHHHHHH-----HHH
Confidence 799999999998553221111 12334 7899999988885443 222
Q ss_pred c-CCCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHHc-------CCCeEEEecCccccCCCCCCCCC
Q psy16545 64 T-HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSH-------GVYQLVFSSSCTVYGEPQFLPIT 130 (600)
Q Consensus 64 ~-~~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~-------~~~r~I~~SS~~vyg~~~~~~~~ 130 (600)
. ..+|+|||+||...... ..++....+++|+.++.++++++... ..++||++||...+..
T Consensus 76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~------- 148 (247)
T PRK09730 76 HDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLG------- 148 (247)
T ss_pred hCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccC-------
Confidence 1 36899999999753221 12344578999999999888776442 1246999999754321
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 131 E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+ .....|+.+|...+.+++.++.+. .+++++++|||.+|+|.
T Consensus 149 ---~~-~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~ 193 (247)
T PRK09730 149 ---AP-GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEM 193 (247)
T ss_pred ---CC-CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcc
Confidence 01 123579999999999998887653 38999999999999995
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=9.6e-10 Score=109.88 Aligned_cols=147 Identities=12% Similarity=0.018 Sum_probs=108.7
Q ss_pred cCCCCcchHHHHHHHhhhcc------------------------CCCccEEecccccccccChHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVT------------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~------------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
-|||+++.+|..+.+..... +.++.++ .+|+++.+++.+++++ +.+
T Consensus 14 lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~-----~~~ 83 (265)
T PRK07097 14 LITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGY-----VCDVTDEDGVQAMVSQ-----IEK 83 (265)
T ss_pred EEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEE-----EcCCCCHHHHHHHHHH-----HHH
Confidence 58999999999885422111 1134455 7899999998886654 333
Q ss_pred c-CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCcc-ccCCCCCCCCCCCC
Q psy16545 64 T-HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCT-VYGEPQFLPITEDH 133 (600)
Q Consensus 64 ~-~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~-vyg~~~~~~~~E~~ 133 (600)
. ..+|+||||||..... ...+++...+++|+.++..+++++.. .+.+++|++||.. .++.
T Consensus 84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 153 (265)
T PRK07097 84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGR---------- 153 (265)
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCC----------
Confidence 2 2589999999986432 12345666889999999988877643 4567999999963 2321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+...|+.+|.+.+.+++.++++. .+++++.++||.+..+.
T Consensus 154 ---~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~ 196 (265)
T PRK07097 154 ---ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQ 196 (265)
T ss_pred ---CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccc
Confidence 456889999999999999998876 38999999999999884
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.7e-10 Score=107.79 Aligned_cols=148 Identities=12% Similarity=0.034 Sum_probs=105.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------cccccChHHhhhHHhhhhccccccc-CCCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------EGDIVSMYANTDLAQKELGWSARCT-HDIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~ 69 (600)
-|||++|.+|+.+.+... ..+.+++...++ .+|+++.+++.+ .+.. .++|+
T Consensus 10 lItGasggIG~~~a~~l~--~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~---------~~~~~~~id~ 78 (237)
T PRK12742 10 LVLGGSRGIGAAIVRRFV--TDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVID---------VVRKSGALDI 78 (237)
T ss_pred EEECCCChHHHHHHHHHH--HCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHH---------HHHHhCCCcE
Confidence 489999999999966433 223333322211 478888877777 3332 25899
Q ss_pred EEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHH
Q psy16545 70 VIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYG 143 (600)
Q Consensus 70 Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~ 143 (600)
+||+||...... ..+++...+++|+.++..+++++.+. ..+++|++||.... ..+. .+.+.|+
T Consensus 79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~----------~~~~-~~~~~Y~ 147 (237)
T PRK12742 79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD----------RMPV-AGMAAYA 147 (237)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc----------cCCC-CCCcchH
Confidence 999999764321 22456779999999999998776553 23589999996431 1133 5678999
Q ss_pred HHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 144 KTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 144 ~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+|.+.+.+++.++.++ .++++++++||.+..+.
T Consensus 148 ~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~ 183 (237)
T PRK12742 148 ASKSALQGMARGLARDFGPRGITINVVQPGPIDTDA 183 (237)
T ss_pred HhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCc
Confidence 99999999999988765 37999999999998764
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=8.6e-10 Score=109.67 Aligned_cols=151 Identities=14% Similarity=0.095 Sum_probs=108.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|.+|..+.+.. ...+.+++.++|+ .+|+++.+++.+++++ +.+.
T Consensus 13 lItGa~~gIG~~~a~~l--~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~ 85 (257)
T PRK09242 13 LITGASKGIGLAIAREF--LGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDW-----VEDH 85 (257)
T ss_pred EEeCCCchHHHHHHHHH--HHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH-----HHHH
Confidence 47899999999985532 2222233322221 6799998887775543 3222
Q ss_pred -CCCCEEEEcCcccCc----ccCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAV----GESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
.++|+|||+||.... ....+++...+++|+.++.++++++. +.+.+++|++||...+.. .
T Consensus 86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~-----------~ 154 (257)
T PRK09242 86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTH-----------V 154 (257)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCC-----------C
Confidence 258999999997432 11234566789999999999988874 345578999999765432 2
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .+++++.++||.+.++.
T Consensus 155 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~ 197 (257)
T PRK09242 155 -RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPL 197 (257)
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcc
Confidence 456789999999999999988765 38999999999999885
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.09 E-value=8.6e-10 Score=109.43 Aligned_cols=151 Identities=11% Similarity=0.008 Sum_probs=109.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------------cccccChHHhhhHHhhhhccccccc-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------------EGDIVSMYANTDLAQKELGWSARCT-HDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~ 67 (600)
-|||++|.+|.++++.. ...+..++.+++. .+|+++.+++.+++++ +.+. .++
T Consensus 14 lItG~~~gIG~a~a~~l--~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~~~~ 86 (253)
T PRK08993 14 VVTGCDTGLGQGMALGL--AEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLER-----AVAEFGHI 86 (253)
T ss_pred EEECCCchHHHHHHHHH--HHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH-----HHHHhCCC
Confidence 58999999999996532 2222233222221 6899999988885554 3332 269
Q ss_pred CEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cC-CCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG-VYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 68 d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
|++|||||...... ..+++...+++|+.++.++++++.. .+ -.++|++||...+.. . ..
T Consensus 87 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~ 154 (253)
T PRK08993 87 DILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQG-----------G-IR 154 (253)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccC-----------C-CC
Confidence 99999999864321 2345777999999999999988754 22 258999999866542 1 33
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...|+.||.+.+.+++.++.+. .+++++.++||.+-.+.
T Consensus 155 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~ 195 (253)
T PRK08993 155 VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNN 195 (253)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcc
Confidence 4689999999999999998875 38999999999998764
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.3e-09 Score=107.61 Aligned_cols=148 Identities=12% Similarity=0.023 Sum_probs=108.1
Q ss_pred cCCCCcchHHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
-|||++|.+|..+++.....+ .++.++ .+|+++.+++.+++++ +.
T Consensus 10 lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~D~~~~~~~~~~~~~-----~~ 79 (247)
T PRK12935 10 IVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAV-----QADVSKVEDANRLVEE-----AV 79 (247)
T ss_pred EEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEE-----ECCCCCHHHHHHHHHH-----HH
Confidence 589999999998855221111 124455 7899999988885554 33
Q ss_pred cc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCC
Q psy16545 63 CT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 63 ~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
+. ..+|+||||||...... ....++..+++|+.++.++++++.. .+.+++|++||...+..
T Consensus 80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---------- 149 (247)
T PRK12935 80 NHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAG---------- 149 (247)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCC----------
Confidence 32 24899999999864322 2245667899999999999999864 34468999999643321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.+. .++++++++||.+.++.
T Consensus 150 -~-~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~ 193 (247)
T PRK12935 150 -G-FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEM 193 (247)
T ss_pred -C-CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChh
Confidence 1 466899999999999998887764 38999999999998763
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.8e-10 Score=107.77 Aligned_cols=149 Identities=13% Similarity=0.063 Sum_probs=106.1
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
|||++|++|+.+.+... ..+.+++.++++ .+|+++.+++.++.++ +.+. .
T Consensus 3 ItG~~g~iG~~la~~l~--~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 75 (239)
T TIGR01830 3 VTGASRGIGRAIALKLA--KEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEE-----IEEELG 75 (239)
T ss_pred EECCCcHHHHHHHHHHH--HCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH-----HHHHhC
Confidence 78999999999865332 222222322221 6799998888774443 2211 2
Q ss_pred CCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCc-cccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSC-TVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~-~vyg~~~~~~~~E~~~~~ 136 (600)
.+|+|||+||..... .....+...+++|+.++.++++++.+ .+.++||++||. +.+|.
T Consensus 76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~------------- 142 (239)
T TIGR01830 76 PIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN------------- 142 (239)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC-------------
Confidence 589999999986432 12245667899999999999999865 345699999996 44543
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.+|.+.+.+++.++++. .++.++++|||.+.++.
T Consensus 143 ~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~ 185 (239)
T TIGR01830 143 AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDM 185 (239)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChh
Confidence 345789999999999998887653 48999999999887663
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=7.7e-10 Score=109.34 Aligned_cols=153 Identities=18% Similarity=0.081 Sum_probs=105.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|++|+.+.+.. ...+.+++..+|+ .+|+++++++.++.++ +.+.
T Consensus 10 lItGasggiG~~l~~~l--~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 82 (248)
T PRK07806 10 LVTGSSRGIGADTAKIL--AGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDT-----AREEF 82 (248)
T ss_pred EEECCCCcHHHHHHHHH--HHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH-----HHHhC
Confidence 48999999999996532 2223333322221 5799999888774443 2222
Q ss_pred CCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChH
Q psy16545 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVY 142 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y 142 (600)
.++|+|||+|+.... ...++...+++|+.++.++++++.+. ...++|++||....... ..+ +. +..++|
T Consensus 83 ~~~d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~----~~~--~~-~~~~~Y 153 (248)
T PRK07806 83 GGLDALVLNASGGME--SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIP----TVK--TM-PEYEPV 153 (248)
T ss_pred CCCcEEEECCCCCCC--CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCc----ccc--CC-ccccHH
Confidence 259999999986432 22345668899999999999999864 22589999996432110 011 12 235789
Q ss_pred HHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 143 GKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 143 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+.||.++|.+++.++.++ .++++++++|+.+-++
T Consensus 154 ~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~ 189 (248)
T PRK07806 154 ARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGT 189 (248)
T ss_pred HHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCc
Confidence 999999999999998764 3799999998877666
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=7.1e-10 Score=109.89 Aligned_cols=151 Identities=12% Similarity=0.015 Sum_probs=108.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------------cccccChHHhhhHHhhhhccccccc-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------------EGDIVSMYANTDLAQKELGWSARCT-HDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~ 67 (600)
-|||+++.+|+.+++.. ...+.+++.++++ .+|+++.+++.+++++ +.+. .++
T Consensus 12 lItGas~gIG~aia~~l--~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~g~i 84 (251)
T PRK12481 12 IITGCNTGLGQGMAIGL--AKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQ-----AVEVMGHI 84 (251)
T ss_pred EEeCCCchHHHHHHHHH--HHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHH-----HHHHcCCC
Confidence 48999999999986522 2222222222221 6899999998886554 3332 259
Q ss_pred CEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cC-CCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG-VYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 68 d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
|++|||||...... ..+++...+++|+.++..+++++.+ .+ -.++|++||...+.. . ..
T Consensus 85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~-----------~-~~ 152 (251)
T PRK12481 85 DILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQG-----------G-IR 152 (251)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCC-----------C-CC
Confidence 99999999764321 2345677899999999999887643 23 358999999865532 1 34
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...|+.||.+.+.+++.++.+. .|++++.++||.+-.+.
T Consensus 153 ~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~ 193 (251)
T PRK12481 153 VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDN 193 (251)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCc
Confidence 5689999999999999998765 38999999999987663
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.7e-10 Score=107.30 Aligned_cols=143 Identities=13% Similarity=0.046 Sum_probs=108.0
Q ss_pred CCCCcchHHHHHHHhhhcc-----------------------CCCccEEecccccccccChHHhhhHHhhhhcccccccC
Q psy16545 9 GTGQGTSVLQLLRTFERVT-----------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~-----------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
|||++|.+|+.+.+..... ..+++++ .+|+++.+++.++.++ + .
T Consensus 2 ItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~------~--~ 68 (230)
T PRK07041 2 VVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTA-----ALDITDEAAVDAFFAE------A--G 68 (230)
T ss_pred eecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEE-----EccCCCHHHHHHHHHh------c--C
Confidence 7999999999885432111 1234556 7899999998883332 1 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
++|++||+||...... ..++....+++|+.++.+++++....+.+++|++||...+.. . ++.+.
T Consensus 69 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~-----------~-~~~~~ 136 (230)
T PRK07041 69 PFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRP-----------S-ASGVL 136 (230)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCC-----------C-CcchH
Confidence 5899999999754321 224566789999999999999766556679999999876542 2 46688
Q ss_pred HHHHHHHHHHHHHHHHhhcCCceEEEEecccccCC
Q psy16545 142 YGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGA 176 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~ 176 (600)
|+.||.+.+.+++.++.++.+++++.++||.+-.+
T Consensus 137 Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~ 171 (230)
T PRK07041 137 QGAINAALEALARGLALELAPVRVNTVSPGLVDTP 171 (230)
T ss_pred HHHHHHHHHHHHHHHHHHhhCceEEEEeecccccH
Confidence 99999999999999998876789999999988665
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=8e-10 Score=110.00 Aligned_cols=148 Identities=14% Similarity=0.116 Sum_probs=109.0
Q ss_pred cCCCCcchHHHHHHHhhhccC-----------------------CCccEEecccccccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-----------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-----------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|.+|..+.+.....+ .++.++ .+|+++.+++.+++++ +.+.
T Consensus 19 lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~D~~~~~~i~~~~~~-----~~~~ 88 (258)
T PRK06935 19 IVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFV-----QVDLTKPESAEKVVKE-----ALEE 88 (258)
T ss_pred EEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEE-----EcCCCCHHHHHHHHHH-----HHHH
Confidence 589999999999855322111 124455 7899999988886655 4332
Q ss_pred C-CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 65 H-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 ~-~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
. .+|++||+||...... ..++++..+++|+.++..+++++. +.+.+++|++||...+.. .
T Consensus 89 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~ 157 (258)
T PRK06935 89 FGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG-----------G 157 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC-----------C
Confidence 2 5899999999754321 223566789999999988887764 445578999999865532 1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.....|+.||.+.+.+++.++++. .++++++++||.+..+.
T Consensus 158 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~ 200 (258)
T PRK06935 158 -KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTAN 200 (258)
T ss_pred -CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccc
Confidence 345789999999999999998876 38999999999998774
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.2e-09 Score=108.58 Aligned_cols=147 Identities=14% Similarity=-0.044 Sum_probs=104.2
Q ss_pred cCCCCcchHHHHHHHhhhccC----------------------CCccEEecccccccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG----------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~----------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+.+.+.....+ .+++++ .+|+.+.+++.++++. +.+.
T Consensus 6 lItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-----~~D~~~~~~~~~~~~~-----~~~~~ 75 (257)
T PRK07074 6 LVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPV-----ACDLTDAASLAAALAN-----AAAER 75 (257)
T ss_pred EEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEE-----EecCCCHHHHHHHHHH-----HHHHc
Confidence 379999999999865322111 124455 7899999888774433 2222
Q ss_pred CCCCEEEEcCcccCcccC----CCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+|||+||....... .......+++|+.++.++++++. +.+.+++|++||...+..
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------- 142 (257)
T PRK07074 76 GPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA------------- 142 (257)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-------------
Confidence 258999999997643221 12234567899999999998873 345678999999643221
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.....|+.+|.+.+.+++.++++. .+++++++|||.++++.
T Consensus 143 ~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~ 185 (257)
T PRK07074 143 LGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQA 185 (257)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcch
Confidence 123579999999999999998775 27999999999999885
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.1e-09 Score=108.45 Aligned_cols=150 Identities=10% Similarity=0.036 Sum_probs=105.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccc-------------------ccccccChHHhhhHHhhhhcccccccC-C-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEAR-------------------REGDIVSMYANTDLAQKELGWSARCTH-D- 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~-------------------~~~Dl~~~~~~~~~~~~~~~~~~~~~~-~- 66 (600)
-|||++|.+|+++.+.. ...+.+.+..++ ..+|+.+.+++.+++++ +.+.. .
T Consensus 9 lItGas~gIG~~la~~l--~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g~~ 81 (253)
T PRK08642 9 LVTGGSRGLGAAIARAF--AREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFAT-----ATEHFGKP 81 (253)
T ss_pred EEeCCCCcHHHHHHHHH--HHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHH-----HHHHhCCC
Confidence 58999999999986532 222222221111 16899999888875544 22211 3
Q ss_pred CCEEEEcCcccCc----------ccCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAV----------GESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITED 132 (600)
Q Consensus 67 ~d~Vih~A~~~~~----------~~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~ 132 (600)
+|++||+||.... ....++....+++|+.++.++++++.. .+..++|++||.....
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------- 151 (253)
T PRK08642 82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN---------- 151 (253)
T ss_pred CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC----------
Confidence 8999999986311 111234556899999999999999853 4456899999864321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+. .+.++|+.||.+.+.+++.+++++ .+++++.++||.+-.+
T Consensus 152 -~~-~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~ 195 (253)
T PRK08642 152 -PV-VPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTT 195 (253)
T ss_pred -CC-CCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCc
Confidence 23 466899999999999999998875 3799999999988766
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.4e-09 Score=110.22 Aligned_cols=148 Identities=16% Similarity=0.123 Sum_probs=108.4
Q ss_pred cCCCCcchHHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
-|||++|.+|..+++.....+ .++.++ .+|+++.+++.+++++ +.
T Consensus 50 LItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~-----i~ 119 (290)
T PRK06701 50 LITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLI-----PGDVSDEAFCKDAVEE-----TV 119 (290)
T ss_pred EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEE-----EccCCCHHHHHHHHHH-----HH
Confidence 589999999999855322111 123345 7899999888775543 32
Q ss_pred cc-CCCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 63 CT-HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 63 ~~-~~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
+. .++|+||||||...... ..+++...+++|+.++.++++++.+. ...++|++||...|...
T Consensus 120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~---------- 189 (290)
T PRK06701 120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN---------- 189 (290)
T ss_pred HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC----------
Confidence 22 26899999999753221 22345678999999999999998653 22589999998766421
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.....|+.||.+.+.+++.++.+. .+++++.++||.++.+.
T Consensus 190 --~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~ 232 (290)
T PRK06701 190 --ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPL 232 (290)
T ss_pred --CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcc
Confidence 234689999999999999999875 38999999999999874
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=9.4e-10 Score=108.93 Aligned_cols=151 Identities=13% Similarity=0.031 Sum_probs=107.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccc----------------------ccccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEAR----------------------REGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~----------------------~~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|++|+++.+.. .+.+...+...+ -.+|+++.+++.++.++ +...
T Consensus 10 litGasg~iG~~l~~~l--~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 82 (252)
T PRK06077 10 VVTGSGRGIGRAIAVRL--AKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKA-----TIDRY 82 (252)
T ss_pred EEeCCCChHHHHHHHHH--HHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHH-----HHHHc
Confidence 58999999999996532 222222221111 15799988887774433 2111
Q ss_pred CCCCEEEEcCcccCcccCC----CChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
.++|+|||+||........ ...+..+++|+.++.++++++.+. ..+++|++||...+. +. .+
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~-~~ 150 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR-----------PA-YG 150 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC-----------CC-CC
Confidence 2689999999975432211 223467899999999999998754 235899999987654 23 56
Q ss_pred CChHHHHHHHHHHHHHHHHhhc-CCceEEEEecccccCCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~ 177 (600)
.+.|+.||.+.+.+++.++++. +++.+.+++||.+.++.
T Consensus 151 ~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~ 190 (252)
T PRK06077 151 LSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKL 190 (252)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChH
Confidence 7899999999999999998876 37899999999998874
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.8e-09 Score=104.99 Aligned_cols=148 Identities=16% Similarity=0.111 Sum_probs=103.9
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhcccccccCC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCTHD 66 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~ 66 (600)
|||++|.+|..+.+. +...+.+++.++|+ .+|+++.+++.+++++ +.. .
T Consensus 6 ItGas~giG~~~a~~--l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~--~ 76 (243)
T PRK07102 6 IIGATSDIARACARR--YAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDS-----LPA--L 76 (243)
T ss_pred EEcCCcHHHHHHHHH--HHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHH-----Hhh--c
Confidence 799999999988442 22222222222221 6799998888774443 322 5
Q ss_pred CCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
+|+|||+||...... ..++....+++|+.++.++++++.. .+.+++|++||..... +. ..
T Consensus 77 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~-~~ 144 (243)
T PRK07102 77 PDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR-----------GR-AS 144 (243)
T ss_pred CCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC-----------CC-CC
Confidence 799999999754322 1233446789999999999988754 4567899999964221 11 34
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...|+.+|.+.+.+++.++.+. .++++++++||.++++.
T Consensus 145 ~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~ 185 (243)
T PRK07102 145 NYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPM 185 (243)
T ss_pred CcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChh
Confidence 5679999999999999987653 38999999999999984
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.4e-09 Score=109.17 Aligned_cols=150 Identities=12% Similarity=-0.021 Sum_probs=105.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------cccccChHHhhhHHhhhhccccccc-CCCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------EGDIVSMYANTDLAQKELGWSARCT-HDIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~ 69 (600)
-|||++|.+|+.+.+... ..+..++..+|+ .+|+++++++.++.++ +.+. .++|+
T Consensus 9 lVtGasggiG~~la~~l~--~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~id~ 81 (273)
T PRK07825 9 AITGGARGIGLATARALA--ALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDA-----VEADLGPIDV 81 (273)
T ss_pred EEeCCCchHHHHHHHHHH--HCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHH-----HHHHcCCCCE
Confidence 589999999999865322 222222222221 6799999988775544 3222 26899
Q ss_pred EEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 70 VIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 70 Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
+|||||...... ..++....+++|+.++.++++++. +.+.+++|++||...+. +. ...+.
T Consensus 82 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~-~~~~~ 149 (273)
T PRK07825 82 LVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKI-----------PV-PGMAT 149 (273)
T ss_pred EEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccC-----------CC-CCCcc
Confidence 999999864322 123455688999999999887764 45667999999975432 12 45688
Q ss_pred HHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 142 YGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
|+.||.+.+.+.+.+..+. .++++++++||.+-.+
T Consensus 150 Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~ 186 (273)
T PRK07825 150 YCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTE 186 (273)
T ss_pred hHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcch
Confidence 9999999998888877654 3899999999988665
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.3e-09 Score=109.47 Aligned_cols=147 Identities=13% Similarity=0.053 Sum_probs=106.4
Q ss_pred cCCCCcchHHHHHHHhhhcc-----------------------CCCccEEecccccccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVT-----------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~-----------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||+++.+|+.+++..... +.++.++ .+|+++.+++.+++++ +.+.
T Consensus 10 lItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~-----~~~~ 79 (272)
T PRK08589 10 VITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAY-----HVDISDEQQVKDFASE-----IKEQ 79 (272)
T ss_pred EEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEE-----EeecCCHHHHHHHHHH-----HHHH
Confidence 48999999999985422111 1124455 7899999888876655 4332
Q ss_pred C-CCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 65 H-DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 65 ~-~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
. ++|++|||||...... ..+.+...+++|+.++..+++++. +.+ .++|++||...+..
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~----------- 147 (272)
T PRK08589 80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAA----------- 147 (272)
T ss_pred cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCC-----------
Confidence 2 5899999999863211 123455688899999988887754 334 68999999765431
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. ...+.|+.||.+.+.+++.+++++ .+++++.+.||.|..+.
T Consensus 148 ~-~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~ 191 (272)
T PRK08589 148 D-LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPL 191 (272)
T ss_pred C-CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCch
Confidence 1 345789999999999999998876 37999999999998774
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.2e-09 Score=108.56 Aligned_cols=143 Identities=16% Similarity=0.170 Sum_probs=100.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTHD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~ 66 (600)
.|||++|.+|+.+.+... ..+.+++.++|+ .+|+.+.+++.+ ++. .+
T Consensus 6 lVtGasg~iG~~ia~~l~--~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---------~~~-~~ 73 (257)
T PRK09291 6 LITGAGSGFGREVALRLA--RKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQ---------AAE-WD 73 (257)
T ss_pred EEeCCCCHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHH---------Hhc-CC
Confidence 489999999999955332 223333333321 579999888877 443 37
Q ss_pred CCEEEEcCcccCcccC----CCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
+|+||||||....... ..+....+++|+.++..+++++ .+.+.+++|++||...+.. . ..
T Consensus 74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-----------~-~~ 141 (257)
T PRK09291 74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLIT-----------G-PF 141 (257)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccC-----------C-CC
Confidence 9999999997643221 2334567889999988776654 4556689999999743321 1 34
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEeccccc
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPV 174 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~ 174 (600)
...|+.||.+.|.+++.+..+. .+++++++|||.+.
T Consensus 142 ~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~ 179 (257)
T PRK09291 142 TGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYL 179 (257)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence 5789999999999998877653 38999999998764
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=2e-09 Score=107.41 Aligned_cols=152 Identities=15% Similarity=0.031 Sum_probs=107.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhccccccc-CC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCT-HD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~ 66 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|+++.+++.+++++ +.+. ..
T Consensus 10 lItG~s~giG~~la~~l--~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~-----~~~~~~~ 82 (263)
T PRK08226 10 LITGALQGIGEGIARVF--ARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKR-----AKEKEGR 82 (263)
T ss_pred EEeCCCChHHHHHHHHH--HHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHH-----HHHHcCC
Confidence 58999999999985532 2222223322221 6899999888885544 3222 25
Q ss_pred CCEEEEcCcccCcccC----CCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
+|+|||+||....... ..+.+..+++|+.++.++++++.+ .+..++|++||...... +. ..
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------~~-~~ 151 (263)
T PRK08226 83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV----------AD-PG 151 (263)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc----------CC-CC
Confidence 8999999997543221 233455789999999999988653 34568999999643110 11 34
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...|+.+|.+.+.+++.++.++ .+++++.++||.+.++.
T Consensus 152 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~ 192 (263)
T PRK08226 152 ETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPM 192 (263)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHH
Confidence 5789999999999999998775 37999999999999884
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.3e-09 Score=107.92 Aligned_cols=151 Identities=18% Similarity=0.122 Sum_probs=106.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||++|.+|.++.+... ..+.+++.++++ .+|+.+.+++.+++++ +.+..
T Consensus 12 lItGas~gIG~~l~~~l~--~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 84 (252)
T PRK07035 12 LVTGASRGIGEAIAKLLA--QQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAH-----IRERHG 84 (252)
T ss_pred EEECCCcHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH-----HHHHcC
Confidence 589999999999865332 222233333332 5789988887775444 33222
Q ss_pred CCCEEEEcCcccCc-----ccCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.+|+|||+||.... ....++.+..+++|+.++..+++++ ++.+.+++|++||...+. +.
T Consensus 85 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~- 152 (252)
T PRK07035 85 RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS-----------PG- 152 (252)
T ss_pred CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC-----------CC-
Confidence 58999999996421 1122345568999999999988776 444567899999864322 22
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+++.+++.++.+. .+++++.++||.+-.+.
T Consensus 153 ~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~ 195 (252)
T PRK07035 153 DFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKF 195 (252)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcc
Confidence 466889999999999999998775 38999999999987764
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.6e-09 Score=107.70 Aligned_cols=151 Identities=14% Similarity=0.097 Sum_probs=107.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||+++.+|..+.+... ..+.+.+.++++ .+|+++.+++.+++++ +.+. .
T Consensus 15 lVtG~s~gIG~~la~~l~--~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~-----~~~~~~ 87 (255)
T PRK06113 15 IITGAGAGIGKEIAITFA--TAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADF-----ALSKLG 87 (255)
T ss_pred EEECCCchHHHHHHHHHH--HCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-----HHHHcC
Confidence 589999999999865322 222222222211 6899999988875544 3222 2
Q ss_pred CCCEEEEcCcccCccc---CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE---SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~---~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
++|+||||||...... ..+++...+++|+.++.++++++.. .+..++|++||..... +. .+
T Consensus 88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~-~~ 155 (255)
T PRK06113 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-----------KN-IN 155 (255)
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC-----------CC-CC
Confidence 5899999999754321 2244556799999999999999863 3445899999975321 22 45
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...|+.||.+.+.+++.++++. .+++++++.||.+-.+.
T Consensus 156 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~ 196 (255)
T PRK06113 156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA 196 (255)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccc
Confidence 6789999999999999998764 37999999999988764
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-09 Score=108.99 Aligned_cols=151 Identities=11% Similarity=0.027 Sum_probs=108.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|+++.+++.+++++ +.+.
T Consensus 11 lVtGas~gIG~~~a~~l--~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~ 83 (260)
T PRK07063 11 LVTGAAQGIGAAIARAF--AREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAA-----AEEA 83 (260)
T ss_pred EEECCCchHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHH-----HHHH
Confidence 58999999999885532 2222233322221 6799999888875554 3322
Q ss_pred -CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
.++|++|||||...... ..+++...+++|+.++..+++++.. .+.+++|++||...+.. .
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~ 152 (260)
T PRK07063 84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKI-----------I 152 (260)
T ss_pred hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccC-----------C
Confidence 26999999999753221 2245667899999999999988743 44568999999754321 2
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
....+|+.||.+.+.+++.++.++ .+++++.++||.+-.+.
T Consensus 153 -~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~ 195 (260)
T PRK07063 153 -PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQL 195 (260)
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChh
Confidence 345789999999999999998876 37999999999987663
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.8e-09 Score=103.49 Aligned_cols=148 Identities=18% Similarity=0.114 Sum_probs=103.4
Q ss_pred cCCCCcchHHHHHHHhh-hccC--------------------------CCccEEecccccccccChHHhhhHHhhhhccc
Q psy16545 8 LGTGQGTSVLQLLRTFE-RVTG--------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWS 60 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~-~~~~--------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 60 (600)
-|||++|.+|+.+++.. +..+ .+++++ .+|+.|.+++.+++++
T Consensus 12 lItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~-----~~D~~~~~~~~~~~~~----- 81 (253)
T PRK07904 12 LLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVI-----DFDALDTDSHPKVIDA----- 81 (253)
T ss_pred EEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEE-----EecCCChHHHHHHHHH-----
Confidence 58999999999986531 1100 123455 7899998887775554
Q ss_pred ccccCCCCEEEEcCcccCcc-cCCCCh---hhhHHhHHHHHHHH----HHHHHHcCCCeEEEecCccccCCCCCCCCCCC
Q psy16545 61 ARCTHDIDCVIHFAAVKAVG-ESMQEP---LMYYKNNLIATINL----LEVMKSHGVYQLVFSSSCTVYGEPQFLPITED 132 (600)
Q Consensus 61 ~~~~~~~d~Vih~A~~~~~~-~~~~~~---~~~~~~Nv~gt~~l----l~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~ 132 (600)
+.+..++|++||++|..... ..+.+. ...+++|+.++..+ +.++++.+..++|++||...+.
T Consensus 82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~---------- 151 (253)
T PRK07904 82 AFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER---------- 151 (253)
T ss_pred HHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC----------
Confidence 44323699999999986431 112222 24689999999875 5556666778999999975321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+. .+.+.|+.||++...+.+.+..+. .++++++++||.+..+.
T Consensus 152 -~~-~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~ 196 (253)
T PRK07904 152 -VR-RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRM 196 (253)
T ss_pred -CC-CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecch
Confidence 12 345689999999998888876553 38999999999998763
|
|
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.3e-10 Score=120.70 Aligned_cols=153 Identities=16% Similarity=0.045 Sum_probs=100.8
Q ss_pred CCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc-CCCeEEEecCccccCCCCCCCCCCCCCC--------
Q psy16545 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTVYGEPQFLPITEDHPT-------- 135 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~r~I~~SS~~vyg~~~~~~~~E~~~~-------- 135 (600)
..+|+|||+||.++++ +.......+|+.||.++++.|++. ..+-++++||+.+. +....+.|...+
T Consensus 105 ~eV~ivih~AAtvrFd---e~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n--~~~~~i~E~~y~~~~~~~~~ 179 (467)
T KOG1221|consen 105 DEVNIVIHSAATVRFD---EPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN--CNVGHIEEKPYPMPETCNPE 179 (467)
T ss_pred hcCCEEEEeeeeeccc---hhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee--cccccccccccCccccCCHH
Confidence 3799999999998754 334457889999999999999986 56889999998665 221222221100
Q ss_pred ----------------------CCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccch
Q psy16545 136 ----------------------GNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNI 193 (600)
Q Consensus 136 ----------------------~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~ 193 (600)
+...+.|.-+|+.+|+++...+. +++++|+||+.|......+..|..+.- ...
T Consensus 180 ~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~---~lPivIiRPsiI~st~~EP~pGWidn~--~gp 254 (467)
T KOG1221|consen 180 KILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE---NLPLVIIRPSIITSTYKEPFPGWIDNL--NGP 254 (467)
T ss_pred HHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc---CCCeEEEcCCceeccccCCCCCccccC--CCC
Confidence 01236699999999999988654 889999999999999877766655432 122
Q ss_pred hHHHHHhhcCCCCeEEEecCCcccccCcceEEeeec
Q psy16545 194 MPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDN 229 (600)
Q Consensus 194 ~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~ 229 (600)
...+.... +|.--.+..|.....|.+.++.++..
T Consensus 255 ~g~i~g~g--kGvlr~~~~d~~~~adiIPvD~vvN~ 288 (467)
T KOG1221|consen 255 DGVIIGYG--KGVLRCFLVDPKAVADIIPVDMVVNA 288 (467)
T ss_pred ceEEEEec--cceEEEEEEccccccceeeHHHHHHH
Confidence 22222222 22222344555555555555544443
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=2e-09 Score=104.60 Aligned_cols=151 Identities=16% Similarity=0.074 Sum_probs=108.3
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEEEc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHF 73 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~ 73 (600)
|||++|.+|+.+.+.. ...+.+++.++++ .+|+++.+.+.+++++ +...++|+|||+
T Consensus 6 vtG~sg~iG~~la~~L--~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~------~~~~~~d~vi~~ 77 (222)
T PRK06953 6 IVGASRGIGREFVRQY--RADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWK------LDGEALDAAVYV 77 (222)
T ss_pred EEcCCCchhHHHHHHH--HhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHH------hcCCCCCEEEEC
Confidence 7899999999996633 2223333333332 7899999888874433 222369999999
Q ss_pred CcccCcc------cCCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCcc-ccCCCCCCCCCCCCCCCCCCChHH
Q psy16545 74 AAVKAVG------ESMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCT-VYGEPQFLPITEDHPTGNIKNVYG 143 (600)
Q Consensus 74 A~~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~-vyg~~~~~~~~E~~~~~~p~s~Y~ 143 (600)
||..... ...++++..+++|+.++.++++++.+. ...++|++||.. .++.. +. .+.+.|+
T Consensus 78 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~-~~~~~Y~ 147 (222)
T PRK06953 78 AGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---------TG-TTGWLYR 147 (222)
T ss_pred CCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---------cC-CCccccH
Confidence 9986321 133456779999999999999998652 234789998853 44421 11 2334799
Q ss_pred HHHHHHHHHHHHHHhhcCCceEEEEecccccCCC
Q psy16545 144 KTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 144 ~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~ 177 (600)
.+|.+.+.+++.++.++++++++.++||.+..+.
T Consensus 148 ~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~ 181 (222)
T PRK06953 148 ASKAALNDALRAASLQARHATCIALHPGWVRTDM 181 (222)
T ss_pred HhHHHHHHHHHHHhhhccCcEEEEECCCeeecCC
Confidence 9999999999999888778999999999998875
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.3e-09 Score=108.23 Aligned_cols=153 Identities=12% Similarity=0.021 Sum_probs=106.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||+++.+|+.+++... ..+.+++.++++ .+|+++.+++.++.++ +.+.
T Consensus 12 lVtG~s~gIG~~ia~~l~--~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~-----~~~~~ 84 (254)
T PRK06114 12 FVTGAGSGIGQRIAIGLA--QAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVAR-----TEAEL 84 (254)
T ss_pred EEECCCchHHHHHHHHHH--HCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH-----HHHHc
Confidence 589999999999865322 122222222221 6799999888875544 3222
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+||||||...... ..+++...+++|+.++..+++++. +.+.+++|++||...+... +.
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~- 154 (254)
T PRK06114 85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN---------RG- 154 (254)
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC---------CC-
Confidence 25899999999864321 234566789999999988877753 3445689999997543211 11
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.+. .++++++++||.+.++.
T Consensus 155 ~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~ 197 (254)
T PRK06114 155 LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPM 197 (254)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcc
Confidence 235789999999999999998765 38999999999998874
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.3e-09 Score=108.22 Aligned_cols=151 Identities=15% Similarity=0.062 Sum_probs=104.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHHhhhHHhhhhccccccc-CCCCEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYANTDLAQKELGWSARCT-HDIDCV 70 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~V 70 (600)
-|||++|.+|..+.+... ..+.+++.++|+ .+|+++.+++.+++++ +.+. .++|+|
T Consensus 11 lItGasggIG~~~a~~l~--~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~id~v 83 (255)
T PRK06057 11 VITGGGSGIGLATARRLA--AEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDT-----AAETYGSVDIA 83 (255)
T ss_pred EEECCCchHHHHHHHHHH--HcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHH-----HHHHcCCCCEE
Confidence 589999999999865322 222233322222 6799998888875544 3221 268999
Q ss_pred EEcCcccCcc------cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCc-cccCCCCCCCCCCCCCCCCCC
Q psy16545 71 IHFAAVKAVG------ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSC-TVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 71 ih~A~~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~-~vyg~~~~~~~~E~~~~~~p~ 139 (600)
||+||..... .....++..+++|+.++..+++++. +.+..++|++||. +++|. . .+.
T Consensus 84 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~-----------~-~~~ 151 (255)
T PRK06057 84 FNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS-----------A-TSQ 151 (255)
T ss_pred EECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC-----------C-CCC
Confidence 9999975321 1123356789999999998887764 3455689999986 34442 1 245
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
..|+.||++.+.+++.++.+. .+++++++|||.+.+|.
T Consensus 152 ~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~ 191 (255)
T PRK06057 152 ISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPL 191 (255)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCch
Confidence 689999999988888776654 27999999999999885
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.7e-09 Score=107.35 Aligned_cols=150 Identities=13% Similarity=0.029 Sum_probs=109.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
.|||++|.+|..+++... ..+..++.++|+ .+|+++++++.+++++ +.+. .++|
T Consensus 19 lItGas~~IG~~la~~l~--~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~~~~d 91 (255)
T PRK06841 19 VVTGGASGIGHAIAELFA--AKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAA-----VISAFGRID 91 (255)
T ss_pred EEECCCChHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHH-----HHHHhCCCC
Confidence 689999999999865332 223333333332 5899999888775443 2221 2689
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccc-cCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTV-YGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~v-yg~~~~~~~~E~~~~~~p~ 139 (600)
+||||||...... ...+....+++|+.++.++++++.+ .+.+++|++||... ++. ...
T Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------~~~ 158 (255)
T PRK06841 92 ILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVAL-------------ERH 158 (255)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCC-------------CCC
Confidence 9999999864322 1234556899999999999999754 35679999999753 332 345
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
..|+.||.+.+.+++.++.++ .+++++.++||.+..+.
T Consensus 159 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 198 (255)
T PRK06841 159 VAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTEL 198 (255)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcc
Confidence 789999999999999998875 38999999999998774
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.4e-09 Score=107.28 Aligned_cols=151 Identities=13% Similarity=0.038 Sum_probs=106.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEec-cc---------------------ccccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVE-AR---------------------REGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~-~~---------------------~~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+.+++.. ...+.+.+.. ++ ..+|+.|.+++.+.+++ +.+.
T Consensus 7 lVtG~s~giG~~~a~~l--~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 79 (246)
T PRK12938 7 YVTGGMGGIGTSICQRL--HKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDK-----VKAEV 79 (246)
T ss_pred EEECCCChHHHHHHHHH--HHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH-----HHHHh
Confidence 48999999999996533 2223232221 00 05899999988875544 3322
Q ss_pred CCCCEEEEcCcccCc----ccCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAV----GESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+||||||.... ....++++..+++|+.++..+++++ ++.+.+++|++||..... +.
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~- 147 (246)
T PRK12938 80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK-----------GQ- 147 (246)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC-----------CC-
Confidence 269999999998642 1123456678999999988877665 445667999999964321 12
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...+.|+.+|.+.+.+++.++++. .++++++++||.+.+|.
T Consensus 148 ~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~ 190 (246)
T PRK12938 148 FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM 190 (246)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCch
Confidence 456789999999999998887664 38999999999998874
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.2e-09 Score=107.27 Aligned_cols=152 Identities=15% Similarity=0.100 Sum_probs=104.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccC--hHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVS--MYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~--~~~~~~~~~~~~~~~~~~ 63 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|+.+ .+++.++.++ +..
T Consensus 10 lItG~sggiG~~la~~l--~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-----i~~ 82 (239)
T PRK08703 10 LVTGASQGLGEQVAKAY--AAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAAT-----IAE 82 (239)
T ss_pred EEECCCCcHHHHHHHHH--HHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHH-----HHH
Confidence 58999999999996533 3334445544543 356654 2344443322 222
Q ss_pred c--CCCCEEEEcCcccCc-----ccCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCC
Q psy16545 64 T--HDIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITED 132 (600)
Q Consensus 64 ~--~~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~ 132 (600)
. ..+|+||||||.... ....+++...+++|+.++.++++++.+ .+..++|++||....
T Consensus 83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~----------- 151 (239)
T PRK08703 83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE----------- 151 (239)
T ss_pred HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc-----------
Confidence 1 268999999997532 112234556899999999999888744 345689999985321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhcC---CceEEEEecccccCCCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAHK---EWNIISLRYFNPVGAHP 178 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~---~~~~~ilR~~~v~G~~~ 178 (600)
.+. .....|+.||.+.+.+++.++.+.. ++++++++||.+++|..
T Consensus 152 ~~~-~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~ 199 (239)
T PRK08703 152 TPK-AYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQR 199 (239)
T ss_pred cCC-CCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccc
Confidence 122 3457899999999999999988752 69999999999999963
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.7e-09 Score=107.52 Aligned_cols=151 Identities=11% Similarity=0.054 Sum_probs=106.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|..+.+... ..+.+++.++|+ .+|+++.+++.++.++ +.+. .
T Consensus 13 lItGasg~IG~~~a~~l~--~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 85 (258)
T PRK06949 13 LVTGASSGLGARFAQVLA--QAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAH-----AETEAG 85 (258)
T ss_pred EEECCCcHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-----HHHhcC
Confidence 589999999999955332 122222222221 6788888887774443 2211 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cC--------CCeEEEecCccccCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG--------VYQLVFSSSCTVYGEPQFLPI 129 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~--------~~r~I~~SS~~vyg~~~~~~~ 129 (600)
++|+|||+||...... ...++...+++|+.++..+++++.. .. ..++|++||...+.
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------- 158 (258)
T PRK06949 86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR------- 158 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC-------
Confidence 5899999999753321 1235667899999999999988753 21 25899999976543
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 130 TEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 130 ~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+. .+.++|+.+|.+.+.+++.++.+. .++++++++||.++++.
T Consensus 159 ----~~-~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~ 203 (258)
T PRK06949 159 ----VL-PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEI 203 (258)
T ss_pred ----CC-CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCc
Confidence 12 356789999999999999988764 38999999999999885
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.6e-09 Score=107.72 Aligned_cols=147 Identities=11% Similarity=0.044 Sum_probs=107.6
Q ss_pred CCCCcchHHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhcccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
|||+++.+|..+.+.....+ ..++++ .+|+++.+++.+++++ +.+
T Consensus 7 ItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~-----~~~ 76 (256)
T PRK12743 7 VTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIR-----QLDLSDLPEGAQALDK-----LIQ 76 (256)
T ss_pred EECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEE-----EccCCCHHHHHHHHHH-----HHH
Confidence 78999999999855322111 124445 6899999988885554 333
Q ss_pred c-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc----C-CCeEEEecCccccCCCCCCCCCCCC
Q psy16545 64 T-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G-VYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 64 ~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
. ..+|+|||+||...... ..+++...+++|+.++..+++++.+. + -+++|++||.... .
T Consensus 77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----------~ 145 (256)
T PRK12743 77 RLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH-----------T 145 (256)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----------C
Confidence 2 25899999999864321 22456678999999999999987543 2 2589999996421 2
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+. .+...|+.+|.+.+.+++.++.+. .+++++.++||.+.++.
T Consensus 146 ~~-~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~ 190 (256)
T PRK12743 146 PL-PGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPM 190 (256)
T ss_pred CC-CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcc
Confidence 33 567899999999999999998765 37999999999999884
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.6e-09 Score=108.04 Aligned_cols=150 Identities=13% Similarity=0.042 Sum_probs=106.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|+++.+++.+++++ +.+. ..+|
T Consensus 10 lItGas~gIG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~g~id 82 (261)
T PRK08265 10 IVTGGATLIGAAVARAL--VAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVAT-----VVARFGRVD 82 (261)
T ss_pred EEECCCChHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHH-----HHHHhCCCC
Confidence 58999999999985532 2222233322322 6899999988885554 3322 2589
Q ss_pred EEEEcCcccCc---ccCCCChhhhHHhHHHHHHHHHHHHHH---cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChH
Q psy16545 69 CVIHFAAVKAV---GESMQEPLMYYKNNLIATINLLEVMKS---HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVY 142 (600)
Q Consensus 69 ~Vih~A~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~~~---~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y 142 (600)
++|||||.... ....+++...+++|+.++..+++++.. .+-.++|++||....- +. .....|
T Consensus 83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~-----------~~-~~~~~Y 150 (261)
T PRK08265 83 ILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKF-----------AQ-TGRWLY 150 (261)
T ss_pred EEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhcc-----------CC-CCCchh
Confidence 99999997532 122345667899999999999988754 2336899999965321 11 345789
Q ss_pred HHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 143 GKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 143 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+.+|.+.+.+++.++.+. .++++++++||.+..+
T Consensus 151 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~ 186 (261)
T PRK08265 151 PASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSR 186 (261)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccCh
Confidence 999999999999998775 3899999999988766
|
|
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.3e-09 Score=106.92 Aligned_cols=146 Identities=16% Similarity=0.158 Sum_probs=103.0
Q ss_pred CCCCcchHHHHHHH---------------------h----hhccCC-CccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 9 GTGQGTSVLQLLRT---------------------F----ERVTGK-PVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 9 vtG~~g~~~~~l~~---------------------~----~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
|||++..+|.+++. + .++... ++.++ .+|++|.+++.+..++ +.
T Consensus 17 ITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~-----~~Dvs~~~~~~~~~~~-----~~ 86 (282)
T KOG1205|consen 17 ITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVL-----QLDVSDEESVKKFVEW-----AI 86 (282)
T ss_pred EeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEE-----eCccCCHHHHHHHHHH-----HH
Confidence 78888888888722 1 112223 37888 9999999999986544 44
Q ss_pred cc-CCCCEEEEcCcccCcccC----CCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCC
Q psy16545 63 CT-HDIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 63 ~~-~~~d~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
.. .++|++|||||....... ..+....+++|+.|+..+.+++ ++.+-+++|.+||..-+-
T Consensus 87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~----------- 155 (282)
T KOG1205|consen 87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM----------- 155 (282)
T ss_pred HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc-----------
Confidence 33 369999999999753211 1344558999999999999987 344457999999975442
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhcCCceE-E--EEecccccCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNI-I--SLRYFNPVGA 176 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~-~--ilR~~~v~G~ 176 (600)
+. +..+.|..||.+.+.+.+.+..+..+... + ++-||.|-..
T Consensus 156 ~~-P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te 200 (282)
T KOG1205|consen 156 PL-PFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETE 200 (282)
T ss_pred CC-CcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeec
Confidence 22 33468999999999999999988733222 1 4777766554
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.9e-09 Score=106.25 Aligned_cols=146 Identities=18% Similarity=0.137 Sum_probs=105.1
Q ss_pred cCCCCcchHHHHHHHhhhccC---------------------CCccEEecccccccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG---------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~---------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|++|+++.+.....+ .+++++ .+|+++.+++.+++++ +.+. .
T Consensus 10 lItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-----~~D~~~~~~~~~~~~~-----~~~~~~ 79 (245)
T PRK12936 10 LVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIF-----PANLSDRDEVKALGQK-----AEADLE 79 (245)
T ss_pred EEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEE-----EccCCCHHHHHHHHHH-----HHHHcC
Confidence 589999999999854321111 123455 7899999988885543 3222 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCcc-ccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCT-VYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~-vyg~~~~~~~~E~~~~~ 136 (600)
++|+||||||...... ...++...+++|+.++.++++++.+ .+.+++|++||.. .++.
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------- 146 (245)
T PRK12936 80 GVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN------------- 146 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCC-------------
Confidence 5999999999864321 2245667899999999999888643 3557899999964 3442
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.....|+.+|.+.+.+++.++.+. .++++++++||.+..+
T Consensus 147 ~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~ 188 (245)
T PRK12936 147 PGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESA 188 (245)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCc
Confidence 234689999999999998887664 3799999999988665
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.2e-09 Score=107.56 Aligned_cols=147 Identities=16% Similarity=0.011 Sum_probs=106.0
Q ss_pred CCCCcchHHHHHHHhhhcc------------------------CCCccEEecccccccccChHHhhhHHhhhhccccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVT------------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~------------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
|||++|.+|..+.+..... +..+.++ .+|+.+.+++.++++. +.+.
T Consensus 5 VtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-----~~D~~~~~~~~~~~~~-----i~~~ 74 (270)
T PRK05650 5 ITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQ-----RCDVRDYSQLTALAQA-----CEEK 74 (270)
T ss_pred EecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE-----EccCCCHHHHHHHHHH-----HHHH
Confidence 7899999999985432111 1123445 7899998888774433 2221
Q ss_pred -CCCCEEEEcCcccCcccCC----CChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
.++|+|||+||........ ++....+++|+.++..+++++ ++.+.+++|++||...+. +.
T Consensus 75 ~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~ 143 (270)
T PRK05650 75 WGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLM-----------QG 143 (270)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcC-----------CC
Confidence 2699999999986432222 334557889999888877764 556677999999976543 22
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...+.|+.+|.+.+.+.+.++.+. .++++++++||.+..+.
T Consensus 144 -~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 186 (270)
T PRK05650 144 -PAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNL 186 (270)
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCc
Confidence 456899999999999999998875 38999999999998874
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.1e-09 Score=106.55 Aligned_cols=151 Identities=14% Similarity=0.054 Sum_probs=107.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|..+.+... ..+.+++.++|+ .+|+++.+++.+++++ +.+. .
T Consensus 11 lItGas~~iG~~ia~~l~--~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-----~~~~~g 83 (253)
T PRK06172 11 LVTGGAAGIGRATALAFA--REGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQ-----TIAAYG 83 (253)
T ss_pred EEeCCCchHHHHHHHHHH--HcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH-----HHHHhC
Confidence 589999999999855322 122222222222 6899999888875554 3222 2
Q ss_pred CCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|+|||+||...... ..+++...+++|+.++..+++++. +.+..++|++||...+.. .
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~-----------~- 151 (253)
T PRK06172 84 RLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGA-----------A- 151 (253)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccC-----------C-
Confidence 5899999999753211 234566789999999988877643 344568999999866542 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...+.|+.||.+.+.+++.++.++ .++++.+++||.+-.+.
T Consensus 152 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~ 194 (253)
T PRK06172 152 PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDM 194 (253)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence 456789999999999999998876 37999999999887663
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.2e-09 Score=107.48 Aligned_cols=126 Identities=13% Similarity=0.055 Sum_probs=96.9
Q ss_pred cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecC
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSS 117 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS 117 (600)
.+|+++.+++.+++++ +. .++|+||||||... ...+...+++|+.++..+++++.+. ..+++|++||
T Consensus 29 ~~Dl~~~~~v~~~~~~-----~~--~~iD~li~nAG~~~----~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS 97 (241)
T PRK12428 29 QADLGDPASIDAAVAA-----LP--GRIDALFNIAGVPG----TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVAS 97 (241)
T ss_pred cccCCCHHHHHHHHHH-----hc--CCCeEEEECCCCCC----CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCc
Confidence 8999999999885554 32 37999999999753 2457789999999999999998763 2369999999
Q ss_pred ccccCCCCCCCCCCC----------------CCCCCCCChHHHHHHHHHHHHHHHH-hhc--CCceEEEEecccccCCC
Q psy16545 118 CTVYGEPQFLPITED----------------HPTGNIKNVYGKTKHFIEEMLKDLS-KAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 118 ~~vyg~~~~~~~~E~----------------~~~~~p~s~Y~~sK~~~e~~~~~~~-~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...|+.....+..|. .+. .+.++|+.||.+.+.+++.++ .+. .|+++++++||.+.++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~ 175 (241)
T PRK12428 98 LAGAEWPQRLELHKALAATASFDEGAAWLAAHPV-ALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPI 175 (241)
T ss_pred HHhhccccchHHHHhhhccchHHHHHHhhhccCC-CcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcc
Confidence 988763322221111 244 567899999999999999888 543 38999999999999884
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.2e-09 Score=105.20 Aligned_cols=151 Identities=12% Similarity=-0.002 Sum_probs=106.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhccccccc-CC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCT-HD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~ 66 (600)
.|||++|.+|..+.+... ..+.++++++|+ .+|+.+.+++.+.++. +.+. .+
T Consensus 10 lItGatg~iG~~la~~l~--~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~ 82 (237)
T PRK07326 10 LITGGSKGIGFAIAEALL--AEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDA-----IVAAFGG 82 (237)
T ss_pred EEECCCCcHHHHHHHHHH--HCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHH-----HHHHcCC
Confidence 589999999999965332 223333333332 5788888887774433 2222 26
Q ss_pred CCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH---cCCCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS---HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~---~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
+|+|||+||...... ..++....+++|+.++..+++++.+ .+.+++|++||...+. +. .+.
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~-~~~ 150 (237)
T PRK07326 83 LDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN-----------FF-AGG 150 (237)
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc-----------CC-CCC
Confidence 999999998764321 2233556899999999999988764 2456899999975432 22 456
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
..|+.+|++.+.+++.+..+. .+++++++|||.+..+.
T Consensus 151 ~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~ 190 (237)
T PRK07326 151 AAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHF 190 (237)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcc
Confidence 789999999999999887553 48999999999997763
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.5e-09 Score=108.59 Aligned_cols=132 Identities=18% Similarity=0.177 Sum_probs=101.0
Q ss_pred HhhhCCceeEEEeecCC------hhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCE
Q psy16545 247 EQFTGKKVDFYSCDLVD------KNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQ 320 (600)
Q Consensus 247 ~~l~~~~v~~i~~Dl~~------~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r 320 (600)
.+...++++.+.+|+.. ...+.++.+ .+|.|||.||....- ....++...||.||..+++.|...++|.
T Consensus 55 ~e~~~~ri~vv~gDl~e~~lGL~~~~~~~La~--~vD~I~H~gA~Vn~v---~pYs~L~~~NVlGT~evlrLa~~gk~Kp 129 (382)
T COG3320 55 DELSADRVEVVAGDLAEPDLGLSERTWQELAE--NVDLIIHNAALVNHV---FPYSELRGANVLGTAEVLRLAATGKPKP 129 (382)
T ss_pred hhhhcceEEEEecccccccCCCCHHHHHHHhh--hcceEEecchhhccc---CcHHHhcCcchHhHHHHHHHHhcCCCce
Confidence 34556899999999985 345666665 789999999986532 3345678899999999999999988999
Q ss_pred EEEecCcccccCCCCCC----CCCCCCC----CCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCC
Q psy16545 321 LVFSSSCTVYGEPQFLP----ITEDHPT----GNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTG 387 (600)
Q Consensus 321 ~v~~SS~~vYg~~~~~~----~~E~~~~----~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~ 387 (600)
|.|+||.+|+....... .+|..+. ....+.|+.|| ..+|.+++...+. |++++++||+. .|+.
T Consensus 130 ~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SK---wvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds 201 (382)
T COG3320 130 LHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSK---WVAEKLVREAGDR-GLPVTIFRPGYITGDS 201 (382)
T ss_pred eEEEeeeeeccccccCCCccccccccccccccCccCCCcchhH---HHHHHHHHHHhhc-CCCeEEEecCeeeccC
Confidence 99999999987543222 2222222 12347899999 7899999999988 99999999988 4443
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.1e-09 Score=111.08 Aligned_cols=150 Identities=15% Similarity=0.094 Sum_probs=106.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|++|.+++.+++++ +.+..
T Consensus 12 lITGas~gIG~~la~~l--a~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~-----~~~~~g 84 (334)
T PRK07109 12 VITGASAGVGRATARAF--ARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADR-----AEEELG 84 (334)
T ss_pred EEECCCCHHHHHHHHHH--HHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHH-----HHHHCC
Confidence 58999999999995532 2222333333332 5899999998886554 33322
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
.+|++||+||...... ..++....+++|+.++.++++++ ++.+.+++|++||...+.. . +
T Consensus 85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~-----------~-~ 152 (334)
T PRK07109 85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRS-----------I-P 152 (334)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccC-----------C-C
Confidence 5999999999753321 22345568889988887766554 4455578999999876642 2 3
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc----CCceEEEEecccccCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH----KEWNIISLRYFNPVGA 176 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~~~v~G~ 176 (600)
..+.|+.||.+.+.+++.++.+. .++++++++||.+.+|
T Consensus 153 ~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~ 195 (334)
T PRK07109 153 LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTP 195 (334)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCc
Confidence 45789999999999998887654 3699999999998776
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=9.3e-10 Score=108.44 Aligned_cols=154 Identities=14% Similarity=0.001 Sum_probs=105.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHHhhhHHhhhhccc-ccccCCCCEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYANTDLAQKELGWS-ARCTHDIDCV 70 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~~~~~~~~~~~~~-~~~~~~~d~V 70 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|+.+.+++.+.+++. .+. ......+|++
T Consensus 5 lItGasggiG~~ia~~l--~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 81 (243)
T PRK07023 5 IVTGHSRGLGAALAEQL--LQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGD-LLAAFVDGASRVLL 81 (243)
T ss_pred EEecCCcchHHHHHHHH--HhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHH-HHHHhccCCCceEE
Confidence 38999999999996633 2233333333332 67999988887733220 000 1111258999
Q ss_pred EEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 71 IHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 71 ih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
|||||...... ..+++...+++|+.++..+++.+.+ .+.+++|++||...+. +. .+.+.
T Consensus 82 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~-~~~~~ 149 (243)
T PRK07023 82 INNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN-----------AY-AGWSV 149 (243)
T ss_pred EEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC-----------CC-CCchH
Confidence 99999764311 1234567889999998877766543 3456999999986553 22 46689
Q ss_pred HHHHHHHHHHHHHHHHhhc-CCceEEEEecccccCC
Q psy16545 142 YGKTKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGA 176 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~ 176 (600)
|+.+|.+.|.+++.++.+. .++++++++||.+-.+
T Consensus 150 Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 150 YCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 9999999999999888663 3899999999988655
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.5e-09 Score=107.22 Aligned_cols=151 Identities=12% Similarity=0.040 Sum_probs=106.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+.+... ..+.+.+.++++ .+|+++.+++.+++++ +.+. .
T Consensus 11 lItGa~g~iG~~la~~l~--~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~~ 83 (250)
T PRK12939 11 LVTGAARGLGAAFAEALA--EAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDA-----AAAALG 83 (250)
T ss_pred EEeCCCChHHHHHHHHHH--HcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-----HHHHcC
Confidence 589999999999965322 112222222221 6799999988885543 3222 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|+|||+||...... ...+....+++|+.++.++++++.+ .+.+++|++||...+.. . .
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~ 151 (250)
T PRK12939 84 GLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWG-----------A-P 151 (250)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccC-----------C-C
Confidence 6999999999864321 2234556788999999999988754 33459999999754431 1 3
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
....|+.+|.+.+.+++.++.++ .++.++.++||.+..+.
T Consensus 152 ~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~ 193 (250)
T PRK12939 152 KLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEA 193 (250)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCcc
Confidence 45689999999999999888664 38999999999988774
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.4e-09 Score=105.47 Aligned_cols=148 Identities=16% Similarity=0.128 Sum_probs=107.2
Q ss_pred cCCCCcchHHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
.|||++|.+|+.+++.....+ .++.++ .+|+++.+++.+++++ +.
T Consensus 9 lItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~-----~~ 78 (245)
T PRK12937 9 IVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAV-----QADVADAAAVTRLFDA-----AE 78 (245)
T ss_pred EEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEE-----ECCCCCHHHHHHHHHH-----HH
Confidence 589999999999965322111 123344 6899999988885544 32
Q ss_pred cc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 63 CT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 63 ~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
+. .++|+|||+||...... ...++...+++|+.++.++++++.+. ..+++|++||...+. +.
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~ 147 (245)
T PRK12937 79 TAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL-----------PL 147 (245)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC-----------CC
Confidence 22 26999999999754211 22345668899999999999988654 235899999865432 22
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
++.+.|+.+|.+.+.+++.++++. .++.+++++||.+-.+.
T Consensus 148 -~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~ 190 (245)
T PRK12937 148 -PGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATEL 190 (245)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCch
Confidence 456889999999999999988764 37999999999887763
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.8e-09 Score=109.70 Aligned_cols=151 Identities=14% Similarity=0.030 Sum_probs=108.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhccccccc-CC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCT-HD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~ 66 (600)
-|||++|.+|..+++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. ..
T Consensus 13 lItGas~gIG~~ia~~l--~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g~ 85 (296)
T PRK05872 13 VVTGAARGIGAELARRL--HARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEE-----AVERFGG 85 (296)
T ss_pred EEECCCchHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHH-----HHHHcCC
Confidence 58999999999986533 2223333333332 3899999988885554 3332 25
Q ss_pred CCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
+|+||||||...... ..++....+++|+.++.++++++... ...++|++||...+.. . ...
T Consensus 86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~ 153 (296)
T PRK05872 86 IDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAA-----------A-PGM 153 (296)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCC-----------C-CCc
Confidence 899999999864321 22345668999999999999987542 2358999999765532 2 345
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
..|+.||.+.+.+++.++.+. .++.++++.||.+..+.
T Consensus 154 ~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~ 193 (296)
T PRK05872 154 AAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDL 193 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchh
Confidence 789999999999999887653 38999999999998774
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.9e-09 Score=101.55 Aligned_cols=146 Identities=13% Similarity=0.058 Sum_probs=107.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCccc--
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGE-- 81 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~-- 81 (600)
.|||++|.+|+.+.+... .. .+++..+|+ .+|+++.+++++++++ + .++|+|||+||......
T Consensus 4 lItGas~giG~~la~~l~--~~-~~vi~~~r~~~~~~~D~~~~~~~~~~~~~------~--~~id~lv~~ag~~~~~~~~ 72 (199)
T PRK07578 4 LVIGASGTIGRAVVAELS--KR-HEVITAGRSSGDVQVDITDPASIRALFEK------V--GKVDAVVSAAGKVHFAPLA 72 (199)
T ss_pred EEEcCCcHHHHHHHHHHH--hc-CcEEEEecCCCceEecCCChHHHHHHHHh------c--CCCCEEEECCCCCCCCchh
Confidence 379999999999976432 22 455555553 5799999998884432 1 26999999999754321
Q ss_pred --CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q psy16545 82 --SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLS 157 (600)
Q Consensus 82 --~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~ 157 (600)
..+++...+++|+.++.++++++.+. ...+++++||..... +. .....|+.||.+.+.+++.++
T Consensus 73 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~-----------~~-~~~~~Y~~sK~a~~~~~~~la 140 (199)
T PRK07578 73 EMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE-----------PI-PGGASAATVNGALEGFVKAAA 140 (199)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC-----------CC-CCchHHHHHHHHHHHHHHHHH
Confidence 22456668899999999999988652 235799999864321 22 456789999999999999998
Q ss_pred hhc-CCceEEEEecccccCC
Q psy16545 158 KAH-KEWNIISLRYFNPVGA 176 (600)
Q Consensus 158 ~~~-~~~~~~ilR~~~v~G~ 176 (600)
.++ .+++++.++||.+-.+
T Consensus 141 ~e~~~gi~v~~i~Pg~v~t~ 160 (199)
T PRK07578 141 LELPRGIRINVVSPTVLTES 160 (199)
T ss_pred HHccCCeEEEEEcCCcccCc
Confidence 864 3899999999988554
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.5e-09 Score=105.39 Aligned_cols=147 Identities=13% Similarity=0.027 Sum_probs=104.5
Q ss_pred cCCCCcchHHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
-|||++|.+|..+.+.....+ .+++++ .+|++|.+++.+++++ +.
T Consensus 13 lItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~~~~~~~~-----~~ 82 (258)
T PRK09134 13 LVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVAL-----QADLADEAEVRALVAR-----AS 82 (258)
T ss_pred EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEE-----EcCCCCHHHHHHHHHH-----HH
Confidence 589999999999855322111 123344 6899999988885544 32
Q ss_pred cc-CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHHc----CCCeEEEecCccccCCCCCCCCCCCC
Q psy16545 63 CT-HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSH----GVYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 63 ~~-~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
+. .++|+||||||..... ...+++...+++|+.++.++++++.+. .-+++|++||...+.
T Consensus 83 ~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~----------- 151 (258)
T PRK09134 83 AALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN----------- 151 (258)
T ss_pred HHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC-----------
Confidence 21 2589999999975431 122456678999999999999988653 235788888764432
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc-CCceEEEEecccccCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGA 176 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~ 176 (600)
+. +...+|+.||.+.+.+++.++++. ++++++.++||.+...
T Consensus 152 ~~-p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~ 194 (258)
T PRK09134 152 LN-PDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPS 194 (258)
T ss_pred CC-CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCC
Confidence 11 234689999999999999998775 3589999999988764
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.7e-09 Score=104.83 Aligned_cols=146 Identities=13% Similarity=0.026 Sum_probs=105.5
Q ss_pred CCCCcchHHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhcccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
|||++|++|..++......+ .++.++ .+|+++.+++.+++++ +.+
T Consensus 3 ItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~Dl~~~~~~~~~~~~-----~~~ 72 (239)
T TIGR01831 3 VTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLL-----QFDVADRVACRTLLEA-----DIA 72 (239)
T ss_pred EeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEE-----EccCCCHHHHHHHHHH-----HHH
Confidence 78999999998854322111 124455 7899999988875544 333
Q ss_pred c-CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHH-----HcCCCeEEEecCcc-ccCCCCCCCCCCC
Q psy16545 64 T-HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK-----SHGVYQLVFSSSCT-VYGEPQFLPITED 132 (600)
Q Consensus 64 ~-~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~-----~~~~~r~I~~SS~~-vyg~~~~~~~~E~ 132 (600)
. ..+|++||+||..... ...+++...+++|+.++.++++++. +.+.+++|++||.. .++.
T Consensus 73 ~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--------- 143 (239)
T TIGR01831 73 EHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGN--------- 143 (239)
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCC---------
Confidence 2 2589999999975322 1234566789999999999988762 23446899999964 3332
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...+.|+.+|.+.+.+.+.++.+. .+++++.++||.+.++.
T Consensus 144 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 186 (239)
T TIGR01831 144 ----RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEM 186 (239)
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCcccc
Confidence 345789999999999998887764 38999999999998774
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.7e-09 Score=107.05 Aligned_cols=150 Identities=11% Similarity=-0.011 Sum_probs=104.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
.|||++|.+|+.+.+.... .+..++..+++ .+|+++.+++.+++++ +.+. .
T Consensus 9 lItG~~g~iG~~~a~~l~~--~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 81 (253)
T PRK08217 9 VITGGAQGLGRAMAEYLAQ--KGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQ-----IAEDFG 81 (253)
T ss_pred EEECCCchHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH-----HHHHcC
Confidence 4899999999999653221 12222222221 6788888887775443 2221 2
Q ss_pred CCCEEEEcCcccCcc-------------cCCCChhhhHHhHHHHHHHHHHHHHH----c-CCCeEEEecCccccCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVG-------------ESMQEPLMYYKNNLIATINLLEVMKS----H-GVYQLVFSSSCTVYGEPQFL 127 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~-------------~~~~~~~~~~~~Nv~gt~~ll~a~~~----~-~~~r~I~~SS~~vyg~~~~~ 127 (600)
.+|+|||+||..... ....+....+++|+.++..+++++.. . .-.++|++||...++.
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~---- 157 (253)
T PRK08217 82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN---- 157 (253)
T ss_pred CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC----
Confidence 589999999964321 11234456888999999988776542 2 2247999999876653
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 128 PITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 128 ~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++++. .+++++.++||.+.++.
T Consensus 158 ---------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~ 200 (253)
T PRK08217 158 ---------MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEM 200 (253)
T ss_pred ---------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc
Confidence 356789999999999999998763 38999999999999885
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.4e-09 Score=104.94 Aligned_cols=147 Identities=15% Similarity=0.116 Sum_probs=105.3
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHHhhhHHhhhhcccccccC-CCCEEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYANTDLAQKELGWSARCTH-DIDCVI 71 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vi 71 (600)
|||++|.+|+.+++.. ...+.+++.++|+ .+|+.+.+++.+++++ +.+.. ++|++|
T Consensus 7 ItGas~gIG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~id~lv 79 (236)
T PRK06483 7 ITGAGQRIGLALAWHL--LAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDE-----LKQHTDGLRAII 79 (236)
T ss_pred EECCCChHHHHHHHHH--HHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHH-----HHhhCCCccEEE
Confidence 7999999999996633 2333344434433 5799999888886554 33322 499999
Q ss_pred EcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cC--CCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 72 HFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG--VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 72 h~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
||||...... ..++....+++|+.++..+.+++.+ .+ ..++|++||..... +. .....
T Consensus 80 ~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~-----------~~-~~~~~ 147 (236)
T PRK06483 80 HNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK-----------GS-DKHIA 147 (236)
T ss_pred ECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc-----------CC-CCCcc
Confidence 9999753321 2345667899999999988777654 22 35899999864321 12 34578
Q ss_pred HHHHHHHHHHHHHHHHhhc-CCceEEEEeccccc
Q psy16545 142 YGKTKHFIEEMLKDLSKAH-KEWNIISLRYFNPV 174 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~ 174 (600)
|+.||.+.+.+++.+++++ ++++++.++||.+.
T Consensus 148 Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~ 181 (236)
T PRK06483 148 YAASKAALDNMTLSFAAKLAPEVKVNSIAPALIL 181 (236)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcee
Confidence 9999999999999999886 36999999999884
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.1e-09 Score=107.24 Aligned_cols=151 Identities=15% Similarity=0.126 Sum_probs=105.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||++|.+|..+++.. ...+.+++.++|+ .+|+.+.+++.+++++ +.+. .++|
T Consensus 9 lItGas~gIG~~ia~~l--~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g~id 81 (262)
T TIGR03325 9 LVTGGASGLGRAIVDRF--VAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVAR-----CVAAFGKID 81 (262)
T ss_pred EEECCCChHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHH-----HHHHhCCCC
Confidence 48999999999996532 2223333333332 5799998887775544 3322 2689
Q ss_pred EEEEcCcccCccc-----CC----CChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE-----SM----QEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 69 ~Vih~A~~~~~~~-----~~----~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|||||...... .. .++...+++|+.++..+++++.+. .-.++|++||...+- +.
T Consensus 82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~- 149 (262)
T TIGR03325 82 CLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFY-----------PN- 149 (262)
T ss_pred EEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceec-----------CC-
Confidence 9999999742111 11 135578999999999999998653 124788888864331 12
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc-CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~ 177 (600)
.....|+.||.+.+.+++.++.++ +.++++.+.||.+..+.
T Consensus 150 ~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~ 191 (262)
T TIGR03325 150 GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDL 191 (262)
T ss_pred CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCC
Confidence 345689999999999999999886 35899999999998774
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.2e-09 Score=105.45 Aligned_cols=148 Identities=12% Similarity=0.047 Sum_probs=107.6
Q ss_pred cCCCCcchHHHHHHHhhhcc------------------------CCCccEEecccccccccChHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVT------------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~------------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
-|||++|.+|+.+.+..... +.++.++ .+|+++++++.+++++ +..
T Consensus 15 lItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~-----~~~ 84 (256)
T PRK06124 15 LVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEAL-----AFDIADEEAVAAAFAR-----IDA 84 (256)
T ss_pred EEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEE-----EccCCCHHHHHHHHHH-----HHH
Confidence 58999999999886532111 1124455 6899999888875554 322
Q ss_pred c-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 64 T-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 64 ~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
. .++|+|||+||...... ..+++...+++|+.++.++++++.+ .+.+++|++||...+. +
T Consensus 85 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~ 153 (256)
T PRK06124 85 EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQV-----------A 153 (256)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhcc-----------C
Confidence 2 25899999999754321 2234566899999999999977643 5667999999975432 1
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .....|+.||.+.+.+++.++.+. .+++++.++||.+.++.
T Consensus 154 ~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~ 197 (256)
T PRK06124 154 R-AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATET 197 (256)
T ss_pred C-CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcc
Confidence 1 345789999999999999888765 38999999999999985
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.2e-09 Score=106.01 Aligned_cols=151 Identities=15% Similarity=0.126 Sum_probs=106.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d 68 (600)
-|||+++.+|+.+.+... ..+.+++..+|+ .+|+++.+++.+++++ +.+.. ++|
T Consensus 10 lVtGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g~id 82 (263)
T PRK06200 10 LITGGGSGIGRALVERFL--AEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQ-----TVDAFGKLD 82 (263)
T ss_pred EEeCCCchHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHH-----HHHhcCCCC
Confidence 489999999998855332 223333333332 5799998888875554 33322 699
Q ss_pred EEEEcCcccCccc-----CCCC----hhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE-----SMQE----PLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 69 ~Vih~A~~~~~~~-----~~~~----~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++||+||...... ..++ +...+++|+.++..+++++... .-.++|++||...+.. .
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~- 150 (263)
T PRK06200 83 CFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYP-----------G- 150 (263)
T ss_pred EEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCC-----------C-
Confidence 9999999753211 1111 4567899999999999887542 2258999999765431 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc-CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~ 177 (600)
.+...|+.||.+.+.+++.++.+. ++++++.+.||.+..+.
T Consensus 151 ~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~ 192 (263)
T PRK06200 151 GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDL 192 (263)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCC
Confidence 345789999999999999999876 46999999999997663
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.9e-09 Score=104.34 Aligned_cols=146 Identities=13% Similarity=0.038 Sum_probs=102.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------cccccChHHhhhHHhhhhcccccccCCCCEEEEcCc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAA 75 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~ 75 (600)
-|||++|.+|+.+.+.. ...+.+++.++++ .+|++++ +.++.+ .+ .++|+|||+||
T Consensus 9 lVtGas~~iG~~ia~~l--~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~--~~~~~~------~~--~~id~lv~~ag 76 (235)
T PRK06550 9 LITGAASGIGLAQARAF--LAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDD--LEPLFD------WV--PSVDILCNTAG 76 (235)
T ss_pred EEcCCCchHHHHHHHHH--HHCCCEEEEEeCCcccccCCcEEEEECChHHH--HHHHHH------hh--CCCCEEEECCC
Confidence 58999999999996633 2333444444443 4666665 333111 22 26999999999
Q ss_pred ccCc-----ccCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHH
Q psy16545 76 VKAV-----GESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTK 146 (600)
Q Consensus 76 ~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK 146 (600)
.... ....+++...+++|+.++.++++++.. .+.+++|++||...+.. . .....|+.+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~-~~~~~Y~~sK 144 (235)
T PRK06550 77 ILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVA-----------G-GGGAAYTASK 144 (235)
T ss_pred CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC-----------C-CCCcccHHHH
Confidence 6421 112345667899999999999998753 34468999999754321 1 3457899999
Q ss_pred HHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 147 HFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 147 ~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.+++.++.++ .++++++++||.+.++.
T Consensus 145 ~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~ 177 (235)
T PRK06550 145 HALAGFTKQLALDYAKDGIQVFGIAPGAVKTPM 177 (235)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcc
Confidence 99999999988775 38999999999998875
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.3e-09 Score=101.77 Aligned_cols=147 Identities=21% Similarity=0.181 Sum_probs=109.9
Q ss_pred cCCCCcchHHHHHHHhhhc-------------------------cCCCccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERV-------------------------TGKPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~-------------------------~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
-|||+++-+|..+++.... .+..++++ .+|+++++++.++.+. +.
T Consensus 10 lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi-----~~DLs~~~~~~~l~~~-----l~ 79 (265)
T COG0300 10 LITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVI-----PADLSDPEALERLEDE-----LK 79 (265)
T ss_pred EEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEE-----ECcCCChhHHHHHHHH-----HH
Confidence 4899999999998543221 11234566 7899999988884443 22
Q ss_pred cc-CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCC
Q psy16545 63 CT-HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 63 ~~-~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
+. ..+|++|||||..... .++++...++++|+.++..|.++. .+.+..++|.++|.+.+-
T Consensus 80 ~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~----------- 148 (265)
T COG0300 80 ERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLI----------- 148 (265)
T ss_pred hcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcC-----------
Confidence 21 2699999999997553 234556679999999999988775 455667899999986553
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhcC--CceEEEEecccccCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAHK--EWNIISLRYFNPVGA 176 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~~--~~~~~ilR~~~v~G~ 176 (600)
|. +..+.|+.||...-.+.+.+..+.. |+.++.+-||.+...
T Consensus 149 p~-p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~ 192 (265)
T COG0300 149 PT-PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTE 192 (265)
T ss_pred CC-cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccc
Confidence 23 4568899999999999988887763 799999999888766
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.1e-09 Score=103.36 Aligned_cols=144 Identities=16% Similarity=0.127 Sum_probs=99.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------cccccChHHhhhHHhhhhcccccccC-CCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------EGDIVSMYANTDLAQKELGWSARCTH-DIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~ 69 (600)
-|||++|++|..+.+... .. .+++.++|+ .+|+.|.+++.+ ++... ++|+
T Consensus 7 lVtG~~g~iG~~l~~~l~--~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---------~~~~~~~id~ 74 (227)
T PRK08219 7 LITGASRGIGAAIARELA--PT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAA---------AVEQLGRLDV 74 (227)
T ss_pred EEecCCcHHHHHHHHHHH--hh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHH---------HHHhcCCCCE
Confidence 489999999998865322 11 223333322 689999888887 44322 6999
Q ss_pred EEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHH----HHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 70 VIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEV----MKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 70 Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a----~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
|||+||...... ..++....+++|+.++..+.++ +++.+ +++|++||...++. . .+..+
T Consensus 75 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~-----------~-~~~~~ 141 (227)
T PRK08219 75 LVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRA-----------N-PGWGS 141 (227)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCc-----------C-CCCch
Confidence 999999864321 1123455788999986555554 44443 68999999866542 2 45678
Q ss_pred HHHHHHHHHHHHHHHHhhcCC-ceEEEEecccccCC
Q psy16545 142 YGKTKHFIEEMLKDLSKAHKE-WNIISLRYFNPVGA 176 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~~~-~~~~ilR~~~v~G~ 176 (600)
|+.+|.+.+.+++.++.+..+ +++..++||.+.++
T Consensus 142 y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~ 177 (227)
T PRK08219 142 YAASKFALRALADALREEEPGNVRVTSVHPGRTDTD 177 (227)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccch
Confidence 999999999999988776545 88888998876654
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.7e-09 Score=104.81 Aligned_cols=147 Identities=14% Similarity=0.090 Sum_probs=106.6
Q ss_pred cCCCCcchHHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
-|||+++.+|+.+++.....+ .++.++ .+|++|++++.+++++ +.
T Consensus 12 lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~Dv~~~~~i~~~~~~-----~~ 81 (263)
T PRK08339 12 FTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYI-----VADLTKREDLERTVKE-----LK 81 (263)
T ss_pred EEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEE-----EecCCCHHHHHHHHHH-----HH
Confidence 589999999998854322111 123445 6899999988886654 32
Q ss_pred ccCCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 63 CTHDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 63 ~~~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
+..++|++||+||..... ...+++...+++|+.++..+++++ ++.+.+++|++||...+. +
T Consensus 82 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~-----------~ 150 (263)
T PRK08339 82 NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE-----------P 150 (263)
T ss_pred hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC-----------C
Confidence 213599999999975432 123456678999999888877665 445557999999986432 1
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
. +....|+.+|.+.+.+++.++.+. .|++++.+.||.+-.+
T Consensus 151 ~-~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 193 (263)
T PRK08339 151 I-PNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTD 193 (263)
T ss_pred C-CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccH
Confidence 2 345679999999999999999876 3799999999998766
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=3e-09 Score=105.47 Aligned_cols=146 Identities=12% Similarity=-0.024 Sum_probs=103.9
Q ss_pred CCCCcchHHHHHHHhhhccC------------------------CCccEEecccccccccChHHhhhHHhhhhccccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTG------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
|||++|.+|+.+.+.....+ ..+.++ .+|+++++++.++.++ +...
T Consensus 6 ItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~D~~~~~~~~~~~~~-----~~~~ 75 (252)
T PRK07677 6 ITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTV-----QMDVRNPEDVQKMVEQ-----IDEK 75 (252)
T ss_pred EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE-----EecCCCHHHHHHHHHH-----HHHH
Confidence 78999999998854322111 123445 6799999888885554 3322
Q ss_pred -CCCCEEEEcCcccCc----ccCCCChhhhHHhHHHHHHHHHHHHHH----cC-CCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAV----GESMQEPLMYYKNNLIATINLLEVMKS----HG-VYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
..+|+|||+||.... ....+++...+++|+.++.++++++.+ .+ ..++|++||...+. +
T Consensus 76 ~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~-----------~ 144 (252)
T PRK07677 76 FGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD-----------A 144 (252)
T ss_pred hCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc-----------C
Confidence 258999999986432 112344567899999999999999843 22 35899999874322 1
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc---CCceEEEEecccccCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH---KEWNIISLRYFNPVGA 176 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~ 176 (600)
. ....+|+.||.+.+.+++.++.++ .|++++.++||.+..+
T Consensus 145 ~-~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~ 188 (252)
T PRK07677 145 G-PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT 188 (252)
T ss_pred C-CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence 1 344689999999999999988775 2899999999999854
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.4e-09 Score=105.54 Aligned_cols=150 Identities=15% Similarity=0.081 Sum_probs=105.1
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
|||++|.+|..+.+... ..+..++.++++ .+|+++++++.+++++ +.+. .
T Consensus 5 ItGas~giG~~la~~la--~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 77 (272)
T PRK07832 5 VTGAASGIGRATALRLA--AQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAAD-----IHAAHG 77 (272)
T ss_pred EeCCCCHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHH-----HHHhcC
Confidence 79999999999855322 223333332321 5788888887775543 3222 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----c-CCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----H-GVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~-~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|+|||+||...... ..++....+++|+.++..+++++.. . ..+++|++||...+. +.
T Consensus 78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~-----------~~- 145 (272)
T PRK07832 78 SMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV-----------AL- 145 (272)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC-----------CC-
Confidence 5899999999753321 2344567899999999999999743 2 235899999974321 11
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+....|+.||.+.+.+.+.++.+. .++++++++||.+.++.
T Consensus 146 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~ 188 (272)
T PRK07832 146 PWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL 188 (272)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 345689999999999988887653 38999999999999874
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.1e-09 Score=108.44 Aligned_cols=151 Identities=16% Similarity=0.102 Sum_probs=107.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+. .
T Consensus 11 lITGAs~GIG~aia~~la--~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g 83 (330)
T PRK06139 11 VITGASSGIGQATAEAFA--RRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQ-----AASFGG 83 (330)
T ss_pred EEcCCCCHHHHHHHHHHH--HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH-----HHHhcC
Confidence 589999999999855322 122222222221 6899999998886655 3332 2
Q ss_pred CCCEEEEcCcccCcccC----CCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|++|||||....... .++....+++|+.++.++++++ ++.+..++|++||...+.. . +
T Consensus 84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~-----------~-p 151 (330)
T PRK06139 84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAA-----------Q-P 151 (330)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCC-----------C-C
Confidence 58999999997643221 2345568999999999988876 3444568999999765432 2 3
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc---CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH---KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~~ 177 (600)
..+.|+.||.+.+.+++.++.+. +++.++.+.||.+.+|.
T Consensus 152 ~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~ 194 (330)
T PRK06139 152 YAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPG 194 (330)
T ss_pred CchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcc
Confidence 45789999999999998888764 37999999999998884
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.9e-09 Score=104.63 Aligned_cols=145 Identities=13% Similarity=0.063 Sum_probs=102.6
Q ss_pred CCCCcchHHHHHHHhhhccC------------------------CCccEEecccccccccChHHhhhHHhhhhccccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTG------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
|||++|.+|..+.+.....+ ..+.++ .+|+++++++.+++++ +.+.
T Consensus 5 ItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~-----~~Dl~~~~~i~~~~~~-----~~~~ 74 (254)
T TIGR02415 5 VTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAY-----KLDVSDKDQVFSAIDQ-----AAEK 74 (254)
T ss_pred EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEE-----EcCCCCHHHHHHHHHH-----HHHH
Confidence 78999999998854321111 123445 6899999988774443 2222
Q ss_pred -CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cC-CCeEEEecCccc-cCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG-VYQLVFSSSCTV-YGEPQFLPITEDH 133 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~r~I~~SS~~v-yg~~~~~~~~E~~ 133 (600)
..+|+|||+||...... ...+....+++|+.++..+++++.+ .+ .+++|++||... ++.
T Consensus 75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 144 (254)
T TIGR02415 75 FGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN---------- 144 (254)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC----------
Confidence 25899999999754321 2244556899999999988777643 23 258999998643 332
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+..+.|+.||.+.+.+++.++.+. .++.+++++||.+..+
T Consensus 145 ---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~ 186 (254)
T TIGR02415 145 ---PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTP 186 (254)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCh
Confidence 346889999999999999888775 2799999999988665
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.4e-09 Score=123.00 Aligned_cols=196 Identities=14% Similarity=0.053 Sum_probs=126.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhccccccc-CC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCT-HD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~ 66 (600)
-|||++|.+|..+.+... ..+.+++.++|+ .+|+++.+++.+++++ +... .+
T Consensus 426 LVTGasggIG~~la~~L~--~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~-----~~~~~g~ 498 (681)
T PRK08324 426 LVTGAAGGIGKATAKRLA--AEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEE-----AALAFGG 498 (681)
T ss_pred EEecCCCHHHHHHHHHHH--HCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHH-----HHHHcCC
Confidence 489999999999865433 223334433332 5689998888774443 3222 26
Q ss_pred CCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCC-CeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGV-YQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~-~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
+|+||||||...... ....+...+++|+.++..+++++. +.+. .+||++||...+.. . .
T Consensus 499 iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~-----------~-~ 566 (681)
T PRK08324 499 VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNP-----------G-P 566 (681)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCC-----------C-C
Confidence 999999999764322 224456789999999999977764 4443 68999999754321 1 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEeccccc-CCCCCCCCCCCCCCcccchhHHHHHhhcCCCCe--EEEec
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPV-GAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPH--FTVFG 212 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~g 212 (600)
..+.|+.||.+.+.+++.++.++ .++++++++|+.|| ++... . ......... ..+.... ...++
T Consensus 567 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~---~-------~~~~~~~~~-~~g~~~~~~~~~~~ 635 (681)
T PRK08324 567 NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIW---T-------GEWIEARAA-AYGLSEEELEEFYR 635 (681)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccc---c-------chhhhhhhh-hccCChHHHHHHHH
Confidence 56899999999999999998776 27999999999998 55311 0 001000000 0010000 01245
Q ss_pred CCcccccCcceEEeeeccccc
Q psy16545 213 ADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 213 ~g~~~~~~~~v~d~v~~~~~a 233 (600)
+++..+.+++.+|+++.+...
T Consensus 636 ~~~~l~~~v~~~DvA~a~~~l 656 (681)
T PRK08324 636 ARNLLKREVTPEDVAEAVVFL 656 (681)
T ss_pred hcCCcCCccCHHHHHHHHHHH
Confidence 566677788888887766544
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.99 E-value=4e-09 Score=103.91 Aligned_cols=148 Identities=14% Similarity=0.105 Sum_probs=104.4
Q ss_pred ccCCCCcchHHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhcccc
Q psy16545 7 NLGTGQGTSVLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 7 ~~vtG~~g~~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
--|||++|++|+.+.+.....+ .++.++ .+|+.+.+++.+++++ +
T Consensus 8 vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~-----~ 77 (248)
T PRK05557 8 ALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAV-----QGDVSDAESVERAVDE-----A 77 (248)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEE-----EcCCCCHHHHHHHHHH-----H
Confidence 3589999999999855322111 122334 5699998888774443 2
Q ss_pred ccc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc----CCCeEEEecCcc-ccCCCCCCCCCC
Q psy16545 62 RCT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----GVYQLVFSSSCT-VYGEPQFLPITE 131 (600)
Q Consensus 62 ~~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~r~I~~SS~~-vyg~~~~~~~~E 131 (600)
.+. .++|+|||+||...... ....+...+++|+.++.++++++.+. +.+++|++||.. .++.
T Consensus 78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~-------- 149 (248)
T PRK05557 78 KAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGN-------- 149 (248)
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCC--------
Confidence 221 26899999999864322 12345567889999999999888653 456899999963 3332
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 132 DHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 132 ~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.....|+.+|.+.+.+++.++++. .+++++++|||.+.++.
T Consensus 150 -----~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~ 192 (248)
T PRK05557 150 -----PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDM 192 (248)
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcc
Confidence 345789999999999998887654 38999999999886653
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.9e-09 Score=105.66 Aligned_cols=153 Identities=10% Similarity=0.005 Sum_probs=99.7
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccc-----------------------ccccccChHHhhhHHhhhhccccccc-
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEAR-----------------------REGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~-----------------------~~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
|||+++.+|..+.+.. ...+.+++.+++ -.+|++|.+++.+.+++...+ +.+.
T Consensus 6 ITGas~gIG~~~a~~l--~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~-~~~~~ 82 (267)
T TIGR02685 6 VTGAAKRIGSSIAVAL--HQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDA-CFRAF 82 (267)
T ss_pred EeCCCCcHHHHHHHHH--HhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHH-HHHcc
Confidence 7999999999985532 222223322211 067999987654322220000 2222
Q ss_pred CCCCEEEEcCcccCcccC----CC-----------ChhhhHHhHHHHHHHHHHHHHHcC----------CCeEEEecCcc
Q psy16545 65 HDIDCVIHFAAVKAVGES----MQ-----------EPLMYYKNNLIATINLLEVMKSHG----------VYQLVFSSSCT 119 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~----~~-----------~~~~~~~~Nv~gt~~ll~a~~~~~----------~~r~I~~SS~~ 119 (600)
.++|+||||||....... .. +....+++|+.++..+++++.... ..++|++||..
T Consensus 83 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~ 162 (267)
T TIGR02685 83 GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAM 162 (267)
T ss_pred CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhh
Confidence 259999999997533111 11 245679999999999998864321 13577777753
Q ss_pred ccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 120 VYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 120 vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
... +. .+.++|+.||.+.+.+++.++.+. .|++++.++||.+..|
T Consensus 163 ~~~-----------~~-~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~ 209 (267)
T TIGR02685 163 TDQ-----------PL-LGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLP 209 (267)
T ss_pred ccC-----------CC-cccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCc
Confidence 221 23 456889999999999999998874 3899999999998766
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.9e-09 Score=106.03 Aligned_cols=148 Identities=12% Similarity=0.008 Sum_probs=103.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------------cccccChHHhhhHHhhhhcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------------EGDIVSMYANTDLAQKELGW 59 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------------~~Dl~~~~~~~~~~~~~~~~ 59 (600)
-|||++|.+|..+++... ..+..++.++|+ .+|+++.+++.+++++
T Consensus 10 lItGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~---- 83 (273)
T PRK08278 10 FITGASRGIGLAIALRAA--RDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK---- 83 (273)
T ss_pred EEECCCchHHHHHHHHHH--HCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH----
Confidence 589999999999966432 222333333332 4899999988875543
Q ss_pred ccccc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCC
Q psy16545 60 SARCT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPIT 130 (600)
Q Consensus 60 ~~~~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~ 130 (600)
+.+. .++|+|||+||...... ..++....+++|+.++.++++++.. .+-.++|++||.....
T Consensus 84 -~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-------- 154 (273)
T PRK08278 84 -AVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD-------- 154 (273)
T ss_pred -HHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc--------
Confidence 3222 26999999999864322 2234566889999999999999854 2335889998853211
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEeccc
Q psy16545 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFN 172 (600)
Q Consensus 131 E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~ 172 (600)
.... .+.++|+.||.+.+.+++.++.+. .+++++.+.|+.
T Consensus 155 -~~~~-~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~ 196 (273)
T PRK08278 155 -PKWF-APHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRT 196 (273)
T ss_pred -cccc-CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCC
Confidence 0112 356899999999999999998876 379999999984
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.9e-09 Score=117.25 Aligned_cols=151 Identities=13% Similarity=0.045 Sum_probs=111.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d 68 (600)
.|||+++.+|..+++.. ...+.+++.++|+ .+|++|++++.+++++ +.+.. .+|
T Consensus 273 lItGas~gIG~~~a~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g~id 345 (520)
T PRK06484 273 AITGGARGIGRAVADRF--AAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQ-----IQARWGRLD 345 (520)
T ss_pred EEECCCcHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHH-----HHHHcCCCC
Confidence 58999999999985532 2223333333331 6899999998886655 44332 599
Q ss_pred EEEEcCcccCc-----ccCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 69 CVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 69 ~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
++|||||.... ....++++..+++|+.++.++++++... +..++|++||...+. +. .+.+.
T Consensus 346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~-~~~~~ 413 (520)
T PRK06484 346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLL-----------AL-PPRNA 413 (520)
T ss_pred EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcC-----------CC-CCCch
Confidence 99999997532 1123456778999999999999998663 335899999975442 12 45689
Q ss_pred HHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 142 YGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
|+.||.+.+.+++.++.+. .|++++.++||.|.++.
T Consensus 414 Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 451 (520)
T PRK06484 414 YCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPA 451 (520)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCch
Confidence 9999999999999998775 37999999999998874
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.1e-09 Score=104.84 Aligned_cols=151 Identities=13% Similarity=0.023 Sum_probs=104.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccc-------------------------ccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEAR-------------------------REGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~-------------------------~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
-|||++|.+|..+++... ..+.+.+.+.+ -.+|+++.+++.++++. +.
T Consensus 12 lItGa~~gIG~~~a~~l~--~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~ 84 (257)
T PRK12744 12 LIAGGAKNLGGLIARDLA--AQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDD-----AK 84 (257)
T ss_pred EEECCCchHHHHHHHHHH--HCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHH-----HH
Confidence 589999999999965432 22222111110 16799999888875543 32
Q ss_pred cc-CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 63 CT-HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 63 ~~-~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
+. .++|++||+||..... ....++...+++|+.++..+++++.+. ...++++++|+..... .
T Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~-----------~ 153 (257)
T PRK12744 85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF-----------T 153 (257)
T ss_pred HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc-----------C
Confidence 22 2699999999975321 123456678999999999999998753 1246666543322211 1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcC--CceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAHK--EWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~~--~~~~~ilR~~~v~G~~ 177 (600)
+..+.|+.||.+.+.+++.++++.. +++++.++||.+.++.
T Consensus 154 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~ 196 (257)
T PRK12744 154 -PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPF 196 (257)
T ss_pred -CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccch
Confidence 3457899999999999999998762 7999999999998774
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.5e-09 Score=118.22 Aligned_cols=151 Identities=15% Similarity=0.060 Sum_probs=109.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|++|++++.+++++ +.+. .
T Consensus 319 lv~G~s~giG~~~a~~l--~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~-----~~~~~g 391 (582)
T PRK05855 319 VVTGAGSGIGRETALAF--AREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEW-----VRAEHG 391 (582)
T ss_pred EEECCcCHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH-----HHHhcC
Confidence 58999999999985532 2223333333332 6899999988885554 3322 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcC-CCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG-VYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.+|+||||||...... ..++....+++|+.|+.++++++. +.+ -.++|++||...|.. .
T Consensus 392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~- 459 (582)
T PRK05855 392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAP-----------S- 459 (582)
T ss_pred CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC-----------C-
Confidence 5899999999864322 224556788999999999988753 333 258999999877652 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.+. .|+++++++||.|-.+.
T Consensus 460 ~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 502 (582)
T PRK05855 460 RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNI 502 (582)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccc
Confidence 456899999999999999988765 38999999999987663
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.1e-09 Score=106.56 Aligned_cols=153 Identities=13% Similarity=0.051 Sum_probs=106.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+++.. ...+.+++..+|+ .+|+++++++.+++++ +.+. .
T Consensus 13 lVtGas~gIG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g 85 (253)
T PRK05867 13 LITGASTGIGKRVALAY--VEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQ-----VTAELG 85 (253)
T ss_pred EEECCCchHHHHHHHHH--HHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH-----HHHHhC
Confidence 48999999999995532 2222233322221 6899999988885554 3332 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cC-CCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG-VYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|++|||||...... ..+++...+++|+.++..+++++.. .+ -.++|++||....-. ..+
T Consensus 86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------~~~- 155 (253)
T PRK05867 86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII---------NVP- 155 (253)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC---------CCC-
Confidence 6999999999764322 2234566889999999999998743 22 247899988643210 011
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...+.|+.||.+.+.+++.++.++ .|++++.++||.+-.+.
T Consensus 156 ~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~ 198 (253)
T PRK05867 156 QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTEL 198 (253)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcc
Confidence 234689999999999999998775 38999999999997764
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=5.7e-09 Score=104.02 Aligned_cols=148 Identities=16% Similarity=0.042 Sum_probs=104.4
Q ss_pred cCCCCcchHHHHHHHhhhccCC-------------------------CccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGK-------------------------PVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~-------------------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
-|||++|.+|..+++.....+. ++.++ .+|+++.+++.++.++ +.
T Consensus 11 lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~Dl~~~~~i~~~~~~-----~~ 80 (261)
T PRK08936 11 VITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAV-----KGDVTVESDVVNLIQT-----AV 80 (261)
T ss_pred EEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEE-----EecCCCHHHHHHHHHH-----HH
Confidence 4899999999998653221111 12344 6799999988875544 32
Q ss_pred cc-CCCCEEEEcCcccCcccC----CCChhhhHHhHHHHHHHHHHHH----HHcC-CCeEEEecCccccCCCCCCCCCCC
Q psy16545 63 CT-HDIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVM----KSHG-VYQLVFSSSCTVYGEPQFLPITED 132 (600)
Q Consensus 63 ~~-~~~d~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~~r~I~~SS~~vyg~~~~~~~~E~ 132 (600)
+. .++|++||+||....... .+++...+++|+.++..+++++ .+.+ -+++|++||...+
T Consensus 81 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~----------- 149 (261)
T PRK08936 81 KEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ----------- 149 (261)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc-----------
Confidence 22 258999999997643221 2345568899998887766554 5544 3689999996432
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+. ++.++|+.+|.+.+.+.+.++.+. .+++++.++||.+..+.
T Consensus 150 ~~~-~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 195 (261)
T PRK08936 150 IPW-PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPI 195 (261)
T ss_pred CCC-CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCc
Confidence 133 456789999999999998887765 38999999999998885
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.7e-09 Score=102.17 Aligned_cols=152 Identities=16% Similarity=0.067 Sum_probs=106.2
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHHhhhHHhhhhcccccccCCCCEEEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIH 72 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih 72 (600)
|||++|.+|+.+.+... ..+.+++.++|+ .+|+.|.+++.++.++ + ...++|+|||
T Consensus 6 ItG~sg~iG~~la~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-----~-~~~~id~vi~ 77 (225)
T PRK08177 6 IIGASRGLGLGLVDRLL--ERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQR-----L-QGQRFDLLFV 77 (225)
T ss_pred EeCCCchHHHHHHHHHH--hCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHH-----h-hcCCCCEEEE
Confidence 79999999999965332 223334433432 5788898888875554 3 2236999999
Q ss_pred cCcccCccc------CCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHH
Q psy16545 73 FAAVKAVGE------SMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYG 143 (600)
Q Consensus 73 ~A~~~~~~~------~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~ 143 (600)
+||...... ...+....+++|+.++..+++++... +..+++++||. +|... ..+. .+...|+
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~--~g~~~------~~~~-~~~~~Y~ 148 (225)
T PRK08177 78 NAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ--LGSVE------LPDG-GEMPLYK 148 (225)
T ss_pred cCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC--ccccc------cCCC-CCccchH
Confidence 999863311 12345568889999999999988643 33578888875 33211 0122 3456799
Q ss_pred HHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 144 KTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 144 ~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+|.+.+.+++.++.++ .++.++.++||.+-.+.
T Consensus 149 ~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~ 184 (225)
T PRK08177 149 ASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM 184 (225)
T ss_pred HHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence 99999999999998775 37999999999998775
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.9e-09 Score=103.55 Aligned_cols=151 Identities=19% Similarity=0.099 Sum_probs=103.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------ccccc--ChHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIV--SMYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~--~~~~~~~~~~~~~~~~~~~ 63 (600)
-|||++|++|..+.+. +...+.+++.++|+ .+|+. +.+++.++.++ +.+
T Consensus 16 lItG~~g~iG~~la~~--l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-----~~~ 88 (247)
T PRK08945 16 LVTGAGDGIGREAALT--YARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADT-----IEE 88 (247)
T ss_pred EEeCCCchHHHHHHHH--HHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHH-----HHH
Confidence 5899999999998653 33334455545543 34443 44444443332 222
Q ss_pred c-CCCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCC
Q psy16545 64 T-HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 64 ~-~~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
. ..+|+|||+||...... ....+...+++|+.++.++++++. +.+.++||++||.....
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~----------- 157 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQ----------- 157 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcC-----------
Confidence 1 25899999999754311 223456789999999999988874 45677999999964331
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhcC--CceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAHK--EWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~~--~~~~~ilR~~~v~G~~ 177 (600)
+. .....|+.||.+.+.+++.++.+.. ++++++++||.+-++.
T Consensus 158 ~~-~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~ 202 (247)
T PRK08945 158 GR-ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAM 202 (247)
T ss_pred CC-CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcc
Confidence 11 3457899999999999998887653 7899999999887663
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.96 E-value=6.1e-09 Score=102.38 Aligned_cols=147 Identities=15% Similarity=0.075 Sum_probs=103.7
Q ss_pred CCCCcchHHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhcccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
|||++|.+|..+.+.....+ .++.++ .+|+.+++++.++++. +.+
T Consensus 5 ItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~D~~~~~~~~~~~~~-----~~~ 74 (242)
T TIGR01829 5 VTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVV-----EGDVSSFESCKAAVAK-----VEA 74 (242)
T ss_pred EECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEE-----EecCCCHHHHHHHHHH-----HHH
Confidence 78999999998855332111 123344 7899998888775543 322
Q ss_pred c-CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 64 T-HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 64 ~-~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
. ..+|+|||+||..... ....++...+++|+.++..+++++ ++.+.+++|++||..... +
T Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~ 143 (242)
T TIGR01829 75 ELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQK-----------G 143 (242)
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC-----------C
Confidence 2 2589999999976432 122345667899999988866554 555677999999964321 1
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .....|+.+|.+.+.+++.++++. .+++++.++||.+.++.
T Consensus 144 ~-~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~ 187 (242)
T TIGR01829 144 Q-FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDM 187 (242)
T ss_pred C-CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcc
Confidence 1 345789999999999998887654 38999999999999875
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=6.6e-09 Score=103.79 Aligned_cols=150 Identities=13% Similarity=0.035 Sum_probs=106.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|..+.+... ..+..++.++|+ .+|+++.+++.+++++ +.+. .
T Consensus 13 lItGasggIG~~la~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~-----~~~~~~ 85 (264)
T PRK07576 13 VVVGGTSGINLGIAQAFA--RAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQ-----IADEFG 85 (264)
T ss_pred EEECCCchHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHH-----HHHHcC
Confidence 489999999998865332 233344444432 5799998888775544 3322 2
Q ss_pred CCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
++|+|||+||..... ...+++...+++|+.++.++++++... .-+++|++||...+. +. ..
T Consensus 86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~-----------~~-~~ 153 (264)
T PRK07576 86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV-----------PM-PM 153 (264)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc-----------CC-CC
Confidence 589999999864321 122345568889999999999987642 125899999975432 12 45
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+.|+.||.+.+.+++.++.+. .+++++.++||.+.+.
T Consensus 154 ~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t 193 (264)
T PRK07576 154 QAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGT 193 (264)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCc
Confidence 6789999999999999998765 3799999999988754
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=7.7e-09 Score=100.50 Aligned_cols=143 Identities=8% Similarity=-0.013 Sum_probs=103.2
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHHhhhHHhhhhcccccccCCCCEEEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIH 72 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih 72 (600)
|||++|.+|+.+.+... ..+.+++..+|+ .+|+.+.+++.+++++ +.. ++|++||
T Consensus 5 ItGas~giG~~ia~~l~--~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~--~id~lv~ 75 (223)
T PRK05884 5 VTGGDTDLGRTIAEGFR--NDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGL-----FPH--HLDTIVN 75 (223)
T ss_pred EEeCCchHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHH-----Hhh--cCcEEEE
Confidence 78999999999965332 222233323322 5899999988885443 222 6899999
Q ss_pred cCcccCc---c------cCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 73 FAAVKAV---G------ESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 73 ~A~~~~~---~------~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
|||.... . ...+++...+++|+.++.++++++... .-.++|++||.. . ...+.
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~---------------~-~~~~~ 139 (223)
T PRK05884 76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN---------------P-PAGSA 139 (223)
T ss_pred CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC---------------C-CCccc
Confidence 9985211 0 022456778999999999999998652 225899999863 1 24478
Q ss_pred HHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 142 YGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
|+.||.+.+.+++.++.++ .+++++.+.||.+..+
T Consensus 140 Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~ 176 (223)
T PRK05884 140 EAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQP 176 (223)
T ss_pred cHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCch
Confidence 9999999999999998875 3799999999998755
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=7.2e-09 Score=102.38 Aligned_cols=148 Identities=14% Similarity=0.087 Sum_probs=102.5
Q ss_pred cCCCCcchHHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
.|||++|.+|..+.+.....+ .++.++ .+|+.+.+++.+++++ +.
T Consensus 6 lItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~-----~~ 75 (248)
T PRK06947 6 LITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVV-----AGDVANEADVIAMFDA-----VQ 75 (248)
T ss_pred EEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEE-----EeccCCHHHHHHHHHH-----HH
Confidence 378999999998854322111 123445 6899999888775544 32
Q ss_pred cc-CCCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHH-cC------CCeEEEecCccc-cCCCCCCC
Q psy16545 63 CT-HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKS-HG------VYQLVFSSSCTV-YGEPQFLP 128 (600)
Q Consensus 63 ~~-~~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~-~~------~~r~I~~SS~~v-yg~~~~~~ 128 (600)
+. ..+|+|||+||...... ...+....+++|+.++..+++++.+ .. -.++|++||... ++.
T Consensus 76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~----- 150 (248)
T PRK06947 76 SAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGS----- 150 (248)
T ss_pred HhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCC-----
Confidence 22 25999999999753321 1233456799999999999865433 21 236999998643 332
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 129 ITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 129 ~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .....|+.||.+.+.+++.++.+. .+++++++|||.+..|.
T Consensus 151 ------~-~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~ 194 (248)
T PRK06947 151 ------P-NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEI 194 (248)
T ss_pred ------C-CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccc
Confidence 1 224679999999999999988765 37999999999998884
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=98.94 E-value=9.5e-09 Score=105.41 Aligned_cols=152 Identities=14% Similarity=0.053 Sum_probs=102.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccC--hHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVS--MYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~--~~~~~~~~~~~~~~~~~ 62 (600)
-|||+++.+|+++++. +...+.+++.++|+ .+|+.+ .+.+.++.+ .+
T Consensus 57 lITGAs~GIG~alA~~--La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~------~~ 128 (320)
T PLN02780 57 LVTGPTDGIGKGFAFQ--LARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKE------TI 128 (320)
T ss_pred EEeCCCcHHHHHHHHH--HHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHH------Hh
Confidence 4899999999999653 22333344444433 345553 222232111 22
Q ss_pred ccCCCCEEEEcCcccCcc------cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCC
Q psy16545 63 CTHDIDCVIHFAAVKAVG------ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITED 132 (600)
Q Consensus 63 ~~~~~d~Vih~A~~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~ 132 (600)
...++|++|||||..... ...++....+++|+.|+..+++++. +.+.+++|++||...+..+
T Consensus 129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-------- 200 (320)
T PLN02780 129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP-------- 200 (320)
T ss_pred cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC--------
Confidence 323477999999986321 1223455689999999999998864 4456789999997654210
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+. +..+.|+.||.+.+.+.+.++.+. .|+++++++||.|-.+.
T Consensus 201 -~~-p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~ 245 (320)
T PLN02780 201 -SD-PLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKM 245 (320)
T ss_pred -CC-ccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCc
Confidence 11 345889999999999999998875 38999999999997763
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=5.1e-09 Score=105.91 Aligned_cols=119 Identities=18% Similarity=0.097 Sum_probs=86.8
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHH----HHcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~----~~~~ 317 (600)
+.++.++.+|+++.+++.++++.. ++|+|||+|+...... +.+++...+++|+.++.++.+++ .+.+
T Consensus 54 ~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 133 (287)
T PRK06194 54 GAEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAA 133 (287)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC
Confidence 345788999999999998877642 5899999999865432 22445567889999999977764 3333
Q ss_pred C------CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeeccc
Q psy16545 318 V------YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~------~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~ 384 (600)
. .++|++||.+.|... +...+|+.+| ...+.+++.+....+.....+|+.++
T Consensus 134 ~~~~~~~g~iv~~sS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~l~~e~~~~~~~irv~~v 191 (287)
T PRK06194 134 EKDPAYEGHIVNTASMAGLLAP------------PAMGIYNVSK---HAVVSLTETLYQDLSLVTDQVGASVL 191 (287)
T ss_pred CCCCCCCeEEEEeCChhhccCC------------CCCcchHHHH---HHHHHHHHHHHHHHhhcCCCeEEEEE
Confidence 2 589999998776432 1236799999 77899999998877665555665544
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=9.5e-09 Score=102.67 Aligned_cols=151 Identities=11% Similarity=0.018 Sum_probs=105.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||+++.+|+.+++... ..+.+++.++|+ .+|++|.+++.+++++ +.+.
T Consensus 12 lItGas~giG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~ 84 (265)
T PRK07062 12 VVTGGSSGIGLATVELLL--EAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAA-----VEAR 84 (265)
T ss_pred EEeCCCchHHHHHHHHHH--HCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHH-----HHHh
Confidence 589999999998854322 122222222221 6799999988886655 4332
Q ss_pred -CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
.++|++|||||...... ..+++...+++|+.++..+++++. +.+..++|++||...+.. .
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~ 153 (265)
T PRK07062 85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQP-----------E 153 (265)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCC-----------C
Confidence 25899999999753211 223466788999998888877753 344568999999754321 1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.....|+.+|.+.+.+++.++.+. .|++++.++||.+-.+.
T Consensus 154 -~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~ 196 (265)
T PRK07062 154 -PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQ 196 (265)
T ss_pred -CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccch
Confidence 345789999999999999888775 38999999999987763
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=1e-08 Score=102.05 Aligned_cols=150 Identities=15% Similarity=0.033 Sum_probs=102.6
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhccccccc-CCC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCT-HDI 67 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~ 67 (600)
|||+++.+|+.+++... ..+.+++.++|+ .+|++|.+++.+++++ +.+. .++
T Consensus 5 ItGas~gIG~aia~~l~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~-----~~~~~g~i 77 (259)
T PRK08340 5 VTASSRGIGFNVARELL--KKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKE-----AWELLGGI 77 (259)
T ss_pred EEcCCcHHHHHHHHHHH--HcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHH-----HHHhcCCC
Confidence 78999999998855322 222222222221 6899999988886554 3332 269
Q ss_pred CEEEEcCcccCcc------cCCCChhhhHHhHHHHHHHHHHHH----H-HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVG------ESMQEPLMYYKNNLIATINLLEVM----K-SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 68 d~Vih~A~~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~----~-~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
|+|||+||..... ....++...+.+|+.++..+.+++ . +.+.+++|++||..... +.
T Consensus 78 d~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~-----------~~- 145 (259)
T PRK08340 78 DALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE-----------PM- 145 (259)
T ss_pred CEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC-----------CC-
Confidence 9999999975311 112334456788888877665543 2 23446899999976532 22
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+...|+.||.+.+.+++.++.++ .|+++..+.||.+-.+.
T Consensus 146 ~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~ 188 (259)
T PRK08340 146 PPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPG 188 (259)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCcc
Confidence 456789999999999999999876 37999999999887663
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=8.2e-09 Score=103.58 Aligned_cols=120 Identities=16% Similarity=0.038 Sum_probs=90.3
Q ss_pred cccccChHHhhhHHhhhhccccccc-CCCCEEEEcCcccCc--------ccCCCChhhhHHhHHHHHHHHHHHHHHc--C
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFAAVKAV--------GESMQEPLMYYKNNLIATINLLEVMKSH--G 108 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~ 108 (600)
.+|++|.+++.+++++ +.+. .++|++|||||.... ....+++...+++|+.++..+.+++... .
T Consensus 61 ~~Dv~d~~~v~~~~~~-----i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~ 135 (274)
T PRK08415 61 ELDVSKPEHFKSLAES-----LKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND 135 (274)
T ss_pred EecCCCHHHHHHHHHH-----HHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc
Confidence 6899999998886665 4433 259999999997531 1122456679999999999999887543 1
Q ss_pred CCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 109 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 109 ~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
-.++|++||.+... +. +..+.|+.||.+.+.+++.++.+. .|++++.+.||.+..+
T Consensus 136 ~g~Iv~isS~~~~~-----------~~-~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 193 (274)
T PRK08415 136 GASVLTLSYLGGVK-----------YV-PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTL 193 (274)
T ss_pred CCcEEEEecCCCcc-----------CC-CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccH
Confidence 25899999864221 12 345789999999999999999875 3799999999988765
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=1e-08 Score=102.83 Aligned_cols=121 Identities=8% Similarity=-0.032 Sum_probs=91.2
Q ss_pred cccccChHHhhhHHhhhhcccccccC-CCCEEEEcCcccCc--------ccCCCChhhhHHhHHHHHHHHHHHHHHc--C
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAAVKAV--------GESMQEPLMYYKNNLIATINLLEVMKSH--G 108 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~ 108 (600)
.+|++|.+++.++.++ +.+.. .+|++|||||.... ....+++...+++|+.++.++++++... .
T Consensus 63 ~~Dv~d~~~v~~~~~~-----~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~ 137 (271)
T PRK06505 63 PCDVEDIASVDAVFEA-----LEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD 137 (271)
T ss_pred eCCCCCHHHHHHHHHH-----HHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc
Confidence 6899999998886665 44432 69999999997532 1123456678999999999998887542 1
Q ss_pred CCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 109 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 109 ~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
-.++|++||..... +. +....|+.||.+.+.+++.++.++ .|++++.+.||.+-.+.
T Consensus 138 ~G~Iv~isS~~~~~-----------~~-~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~ 196 (271)
T PRK06505 138 GGSMLTLTYGGSTR-----------VM-PNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLA 196 (271)
T ss_pred CceEEEEcCCCccc-----------cC-CccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccc
Confidence 25899999864321 12 345789999999999999999886 37999999999998763
|
|
| >KOG2865|consensus | Back alignment and domain information |
|---|
Probab=98.92 E-value=7.8e-09 Score=98.40 Aligned_cols=184 Identities=14% Similarity=0.144 Sum_probs=130.3
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 332 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~ 332 (600)
.+-+...|+.|++++.++.+ ...+||++.+- +-+.....+.++|+.+...|...|++.|+.|||++|+...-
T Consensus 110 Qvl~~~fd~~DedSIr~vvk--~sNVVINLIGr----d~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan-- 181 (391)
T KOG2865|consen 110 QVLFMKFDLRDEDSIRAVVK--HSNVVINLIGR----DYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN-- 181 (391)
T ss_pred ceeeeccCCCCHHHHHHHHH--hCcEEEEeecc----ccccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc--
Confidence 46788999999999999998 67999999764 33445567889999999999999999999999999996511
Q ss_pred CCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceE
Q psy16545 333 PQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYI 411 (600)
Q Consensus 333 ~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 411 (600)
... .+-|=.+| ..+|..++.. --+.+++||+. +|.-|+ +++++..++...
T Consensus 182 -----------v~s-~Sr~LrsK---~~gE~aVrda----fPeAtIirPa~iyG~eDr-----fln~ya~~~rk~----- 232 (391)
T KOG2865|consen 182 -----------VKS-PSRMLRSK---AAGEEAVRDA----FPEATIIRPADIYGTEDR-----FLNYYASFWRKF----- 232 (391)
T ss_pred -----------ccC-hHHHHHhh---hhhHHHHHhh----CCcceeechhhhcccchh-----HHHHHHHHHHhc-----
Confidence 111 14566777 5678877754 33578999987 654332 444443322210
Q ss_pred EeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhh
Q psy16545 412 FYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFE 491 (600)
Q Consensus 412 ~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi 491 (600)
.++++ ++.|.-+ + ...+
T Consensus 233 ------------------------------------------------------~~~pL----~~~GekT-~----K~PV 249 (391)
T KOG2865|consen 233 ------------------------------------------------------GFLPL----IGKGEKT-V----KQPV 249 (391)
T ss_pred ------------------------------------------------------Cceee----ecCCcce-e----eccE
Confidence 01111 0111111 0 2233
Q ss_pred hhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC-CceeEeEcCCCCCccHHHHHHHHhhhcCC
Q psy16545 492 RVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP-VPYIFYNLGTGQGTSVLQLLRTFERVTGK 556 (600)
Q Consensus 492 ~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~-~~~~~~nl~~~~~~s~~e~~~~~~~~~g~ 556 (600)
||.||+++|..+..++ ..+++|..+++....+.|+++.+.+....
T Consensus 250 --------------------yV~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~eLvd~my~~~~~ 295 (391)
T KOG2865|consen 250 --------------------YVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLSELVDIMYDMARE 295 (391)
T ss_pred --------------------EEehHHHHHHHhccCccccCceeeecCCchhhHHHHHHHHHHHHhh
Confidence 4899999999998766 55999999999999999999999887653
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.6e-08 Score=100.63 Aligned_cols=178 Identities=17% Similarity=0.153 Sum_probs=114.0
Q ss_pred ceeEEEeecCChhhHHHHhhc----CC-ccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCc
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAK----HD-IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSC 327 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~----~~-~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~ 327 (600)
+++.+.+|+.|++++.++++. .+ +|.|+|+++... +. .....+++++|++.|++|||++||.
T Consensus 40 ~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~------~~-------~~~~~~~i~aa~~~gv~~~V~~Ss~ 106 (285)
T TIGR03649 40 NEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIP------DL-------APPMIKFIDFARSKGVRRFVLLSAS 106 (285)
T ss_pred CCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCC------Ch-------hHHHHHHHHHHHHcCCCEEEEeecc
Confidence 456678999999999998832 25 899999976421 11 2345689999999999999999996
Q ss_pred ccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCCCC
Q psy16545 328 TVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKP 407 (600)
Q Consensus 328 ~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~~ 407 (600)
.++.. .+ .+ ...|..++. ..+++++++||+.+..+ ..
T Consensus 107 ~~~~~------------~~-------~~---~~~~~~l~~---~~gi~~tilRp~~f~~~------------------~~ 143 (285)
T TIGR03649 107 IIEKG------------GP-------AM---GQVHAHLDS---LGGVEYTVLRPTWFMEN------------------FS 143 (285)
T ss_pred ccCCC------------Cc-------hH---HHHHHHHHh---ccCCCEEEEeccHHhhh------------------hc
Confidence 54311 00 11 123333332 24899999998654110 00
Q ss_pred cceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhh
Q psy16545 408 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLL 487 (600)
Q Consensus 408 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 487 (600)
.+.. .+.+ .+...+. .+.+++.
T Consensus 144 ~~~~--------------------------~~~~-----------------------~~~~~~~---~~~g~~~------ 165 (285)
T TIGR03649 144 EEFH--------------------------VEAI-----------------------RKENKIY---SATGDGK------ 165 (285)
T ss_pred cccc--------------------------cccc-----------------------ccCCeEE---ecCCCCc------
Confidence 0000 0000 0000110 1123333
Q ss_pred hhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC-CceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccC
Q psy16545 488 RTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP-VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEA 564 (600)
Q Consensus 488 ~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~-~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 564 (600)
.+|++ ++|+++++..++..+ ..++.||+.+++.+|.+|+++.+.+.+|+++.....+
T Consensus 166 ~~~v~--------------------~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~~~~ 223 (285)
T TIGR03649 166 IPFVS--------------------ADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGRKITHVKLT 223 (285)
T ss_pred cCccc--------------------HHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCCceEEEeCC
Confidence 66777 888888888887764 3478999999999999999999999999876655543
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.1e-08 Score=101.45 Aligned_cols=151 Identities=13% Similarity=0.005 Sum_probs=106.1
Q ss_pred cCCCCc--chHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CC
Q psy16545 8 LGTGQG--TSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HD 66 (600)
Q Consensus 8 ~vtG~~--g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~ 66 (600)
-|||++ +.+|+.+++.. ...+.+++..+|+ .+|+++++++.+++++ +.+. .+
T Consensus 11 lItGas~~~gIG~a~a~~l--a~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~-----~~~~~g~ 83 (252)
T PRK06079 11 VVMGVANKRSIAWGCAQAI--KDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFAT-----IKERVGK 83 (252)
T ss_pred EEeCCCCCCchHHHHHHHH--HHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHH-----HHHHhCC
Confidence 478887 56998885532 2222222222211 6899999998886665 4433 25
Q ss_pred CCEEEEcCcccCc--------ccCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAV--------GESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 67 ~d~Vih~A~~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
+|++|||||.... ....++++..+++|+.++..+++++... .-.++|++||..... +.
T Consensus 84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~-----------~~- 151 (252)
T PRK06079 84 IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER-----------AI- 151 (252)
T ss_pred CCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc-----------cC-
Confidence 9999999997532 1122456678999999999999887653 125899999864321 12
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+..+.|+.||.+.+.+++.++.++ .|++++.+.||.|-.+.
T Consensus 152 ~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~ 194 (252)
T PRK06079 152 PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLA 194 (252)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccc
Confidence 345789999999999999999876 38999999999997763
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.4e-08 Score=103.98 Aligned_cols=161 Identities=14% Similarity=0.041 Sum_probs=106.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCC-ccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKP-VPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~-~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||+++.+|..+++... ..+ .+++..+|+ .+|+++.+++.+++++ +.+.
T Consensus 7 lITGas~GIG~aia~~L~--~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~-----~~~~~ 79 (314)
T TIGR01289 7 IITGASSGLGLYAAKALA--ATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQ-----FRESG 79 (314)
T ss_pred EEECCCChHHHHHHHHHH--HcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHH-----HHHhC
Confidence 378999999988865322 222 233322221 5899999998886655 3322
Q ss_pred CCCCEEEEcCcccCcc-----cCCCChhhhHHhHHHHHHHHHHHHH----HcC--CCeEEEecCccccCCCCC----CC-
Q psy16545 65 HDIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVMK----SHG--VYQLVFSSSCTVYGEPQF----LP- 128 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~--~~r~I~~SS~~vyg~~~~----~~- 128 (600)
.++|++|||||..... ...++....+++|+.++..+++++. +.+ ..++|++||...+..... .+
T Consensus 80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~ 159 (314)
T TIGR01289 80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKA 159 (314)
T ss_pred CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcc
Confidence 2699999999975321 1223456689999999999977753 332 369999999866532100 00
Q ss_pred -----------------CCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc---CCceEEEEecccccCC
Q psy16545 129 -----------------ITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH---KEWNIISLRYFNPVGA 176 (600)
Q Consensus 129 -----------------~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~ 176 (600)
..+..+. .+...|+.||++...++++++++. .++.++.++||.|...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T 226 (314)
T TIGR01289 160 NLGDLSGLAAGFKAPIAMIDGKEF-KGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADT 226 (314)
T ss_pred cccccccccccCCCcccccCCCCc-chhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCC
Confidence 0112233 456789999999999888887764 3799999999999643
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1e-08 Score=102.02 Aligned_cols=151 Identities=13% Similarity=0.074 Sum_probs=106.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCcc-EEecccc---------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVP-YIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~-~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|..+.+... ..+.+ ++.++|. .+|+++++++.+++++ +...
T Consensus 10 lItGa~g~iG~~la~~l~--~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 82 (260)
T PRK06198 10 LVTGGTQGLGAAIARAFA--ERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAA-----ADEAF 82 (260)
T ss_pred EEeCCCchHHHHHHHHHH--HCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH-----HHHHh
Confidence 589999999998855332 12222 2222221 5788888888774443 2221
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc----C-CCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G-VYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
.++|+|||+||...... ..+.+...+++|+.++.++++++.+. + ..++|++||...++. .
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~-----------~ 151 (260)
T PRK06198 83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGG-----------Q 151 (260)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccC-----------C
Confidence 25899999999754221 22334567999999999999887442 2 357999999876652 1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...+.|+.+|.+.|.+++.++.+. .+++++.++||.++++.
T Consensus 152 -~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~ 194 (260)
T PRK06198 152 -PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEG 194 (260)
T ss_pred -CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcc
Confidence 345789999999999999988765 37999999999999885
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.8e-08 Score=100.20 Aligned_cols=120 Identities=18% Similarity=0.067 Sum_probs=89.7
Q ss_pred cccccChHHhhhHHhhhhcccccccC-CCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHH----HHcCCC
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVM----KSHGVY 110 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~ 110 (600)
.+|+++.+++.++++. +.+.. .+|+|||+||..... ...++.+..+++|+.++..+.+++ ++.+-.
T Consensus 74 ~~D~~~~~~i~~~~~~-----~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g 148 (256)
T PRK12859 74 ELDLTQNDAPKELLNK-----VTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGG 148 (256)
T ss_pred EcCCCCHHHHHHHHHH-----HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCe
Confidence 7899999998886654 43322 489999999975332 122345668999999999986554 333446
Q ss_pred eEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 111 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 111 r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
++|++||..... +. .+...|+.||.+.+.+++.++.+. .+++++.++||.+-.+
T Consensus 149 ~iv~isS~~~~~-----------~~-~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~ 204 (256)
T PRK12859 149 RIINMTSGQFQG-----------PM-VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTG 204 (256)
T ss_pred EEEEEcccccCC-----------CC-CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCC
Confidence 899999975432 23 456899999999999999998764 3899999999988765
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.9e-09 Score=104.46 Aligned_cols=115 Identities=14% Similarity=0.018 Sum_probs=85.9
Q ss_pred cccccChHHhhhHHhhhhccccccc-CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHH----cC--
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HG-- 108 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-- 108 (600)
.+|+++.+++.+++++ +.+. .++|++|||||..... ...+++...+++|+.++..+++++.. ..
T Consensus 70 ~~Dv~~~~~v~~~~~~-----~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ 144 (286)
T PRK07791 70 GDDIADWDGAANLVDA-----AVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKA 144 (286)
T ss_pred eCCCCCHHHHHHHHHH-----HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhccc
Confidence 5799999988886655 4433 2699999999986422 12345677899999999999888742 11
Q ss_pred ----CCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecc
Q psy16545 109 ----VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYF 171 (600)
Q Consensus 109 ----~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~ 171 (600)
-.++|++||..... +. .....|+.||.+.+.+++.++.+. .+++++.+.||
T Consensus 145 ~~~~~g~Iv~isS~~~~~-----------~~-~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg 201 (286)
T PRK07791 145 GRAVDARIINTSSGAGLQ-----------GS-VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA 201 (286)
T ss_pred CCCCCcEEEEeCchhhCc-----------CC-CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC
Confidence 14899999964322 11 345789999999999999998875 38999999997
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.8e-08 Score=100.54 Aligned_cols=150 Identities=17% Similarity=0.069 Sum_probs=104.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTHDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 67 (600)
.|||++|.+|..+.+... ..+.+++.++|+ .+|++|.+++.++.+. +.....+
T Consensus 9 lItG~s~~iG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-----~~~~~~i 81 (263)
T PRK09072 9 LLTGASGGIGQALAEALA--AAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLAR-----AREMGGI 81 (263)
T ss_pred EEECCCchHHHHHHHHHH--HCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH-----HHhcCCC
Confidence 589999999999865322 222233322222 6899999888775443 2211368
Q ss_pred CEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 68 d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
|+|||+||...... ..++....+++|+.|+.++++++.+ .+.+++|++||...+.. . ...
T Consensus 82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~-~~~ 149 (263)
T PRK09072 82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIG-----------Y-PGY 149 (263)
T ss_pred CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcC-----------C-CCc
Confidence 99999999864321 1234556888999999999988754 33468999988643211 1 345
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+.|+.+|.+.+.+++.++.++ .+++++.+.||.+.++
T Consensus 150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~ 188 (263)
T PRK09072 150 ASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTA 188 (263)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccc
Confidence 789999999999999998775 3799999999888665
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=8.1e-09 Score=101.79 Aligned_cols=151 Identities=14% Similarity=0.059 Sum_probs=105.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEec-ccc---------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVE-ARR---------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~-~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|..+.+.. ...+.+.+.+ +++ .+|+++++++.+.++. +.+.
T Consensus 9 lI~Gasg~iG~~la~~l--~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 81 (247)
T PRK05565 9 IVTGASGGIGRAIAELL--AKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQ-----IVEKF 81 (247)
T ss_pred EEeCCCcHHHHHHHHHH--HHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH-----HHHHh
Confidence 58999999999986532 1222222222 221 6899999988774443 2221
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+|||+||...... ..++.+..+++|+.++.++++++.. .+.+++|++||...+.. .
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~-----------~- 149 (247)
T PRK05565 82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIG-----------A- 149 (247)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccC-----------C-
Confidence 25999999999863221 2234566899999999999888754 34568999999755432 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.....|+.+|.+.+.+++.++.+. .+++++++|||.+..+.
T Consensus 150 ~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~ 192 (247)
T PRK05565 150 SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEM 192 (247)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcc
Confidence 345689999999999988887764 38999999999997764
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.1e-08 Score=104.38 Aligned_cols=145 Identities=16% Similarity=-0.003 Sum_probs=101.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
-|||+++.+|+.++... ...+..++..++. .+|+++.+++.++.++ +.+..
T Consensus 16 lVTGas~gIG~~ia~~L--~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~-----~~~~g 88 (306)
T PRK07792 16 VVTGAAAGLGRAEALGL--ARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVAT-----AVGLG 88 (306)
T ss_pred EEECCCChHHHHHHHHH--HHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH-----HHHhC
Confidence 58999999999985422 2222222222211 6799999888886554 33312
Q ss_pred CCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHHc-----------CCCeEEEecCccccCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSH-----------GVYQLVFSSSCTVYGEPQFLPIT 130 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~-----------~~~r~I~~SS~~vyg~~~~~~~~ 130 (600)
++|+||||||..... ....++...+++|+.++.++++++... ...++|++||...+..
T Consensus 89 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------- 161 (306)
T PRK07792 89 GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVG------- 161 (306)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccC-------
Confidence 699999999986532 123456678999999999999886421 1248999999754321
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecc
Q psy16545 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYF 171 (600)
Q Consensus 131 E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~ 171 (600)
. .....|+.||.+.+.+++.++.+. .+++++.+.|+
T Consensus 162 ----~-~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg 199 (306)
T PRK07792 162 ----P-VGQANYGAAKAGITALTLSAARALGRYGVRANAICPR 199 (306)
T ss_pred ----C-CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC
Confidence 1 345689999999999999988764 38999999886
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.2e-08 Score=102.37 Aligned_cols=160 Identities=15% Similarity=0.077 Sum_probs=103.9
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-CC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-HD 66 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~ 66 (600)
|||+++.+|..+++.....+. ..++..+|+ .+|+++.+++.+++++ +.+. .+
T Consensus 2 ITGas~GIG~aia~~l~~~G~-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~~~~~~ 75 (308)
T PLN00015 2 ITGASSGLGLATAKALAETGK-WHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDN-----FRRSGRP 75 (308)
T ss_pred EeCCCChHHHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHH-----HHhcCCC
Confidence 688988899888553222110 222222221 6799999998886665 3332 25
Q ss_pred CCEEEEcCcccCcc-----cCCCChhhhHHhHHHHHHHHHHHHH----HcC--CCeEEEecCccccCCC---CCCC----
Q psy16545 67 IDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVMK----SHG--VYQLVFSSSCTVYGEP---QFLP---- 128 (600)
Q Consensus 67 ~d~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~--~~r~I~~SS~~vyg~~---~~~~---- 128 (600)
+|++|||||..... ...++....+++|+.|+..+++++. +.+ .+++|++||...+-.. ...+
T Consensus 76 iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~ 155 (308)
T PLN00015 76 LDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANL 155 (308)
T ss_pred CCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccch
Confidence 99999999975321 1224556799999999998877753 333 3699999997543100 0000
Q ss_pred ------------------CCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc---CCceEEEEecccccCC
Q psy16545 129 ------------------ITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH---KEWNIISLRYFNPVGA 176 (600)
Q Consensus 129 ------------------~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~ 176 (600)
+++. +. .+...|+.||++.+..++.++.++ .++.++.++||.|...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 222 (308)
T PLN00015 156 GDLRGLAGGLNGLNSSAMIDGG-EF-DGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATT 222 (308)
T ss_pred hhhhhhhcccCCccchhhcccc-CC-cHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCc
Confidence 0111 22 345779999999888878887764 2799999999999643
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.5e-08 Score=100.89 Aligned_cols=147 Identities=13% Similarity=-0.031 Sum_probs=102.4
Q ss_pred cCCCCcchHHHHHHHhhhccC--------------------------CCccEEecccccccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG--------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~--------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
-|||+++.+|+.+++.....+ .++.++ .+|++|++++.+++++ +
T Consensus 12 lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~D~~~~~~~~~~~~~-----~ 81 (260)
T PRK08416 12 VISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAY-----PLNILEPETYKELFKK-----I 81 (260)
T ss_pred EEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEE-----EcCCCCHHHHHHHHHH-----H
Confidence 489999999998854221111 123445 6799999998886654 3
Q ss_pred ccc-CCCCEEEEcCcccCc------c----cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCC
Q psy16545 62 RCT-HDIDCVIHFAAVKAV------G----ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQF 126 (600)
Q Consensus 62 ~~~-~~~d~Vih~A~~~~~------~----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~ 126 (600)
.+. .++|++|||||.... . ....+....+++|+.+...+.+++. +.+.+++|++||....-
T Consensus 82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---- 157 (260)
T PRK08416 82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV---- 157 (260)
T ss_pred HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc----
Confidence 332 259999999986421 0 0123445588889988887766653 33446899999964221
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 127 LPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 127 ~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+. +....|+.||.+.+.+++.++.++ .+++++.++||.+-.+
T Consensus 158 -------~~-~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~ 201 (260)
T PRK08416 158 -------YI-ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTD 201 (260)
T ss_pred -------CC-CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCh
Confidence 12 345689999999999999999876 3899999999988665
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.2e-08 Score=103.04 Aligned_cols=163 Identities=12% Similarity=0.055 Sum_probs=103.9
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc------------cccccChHHhhhHHhhhhccccccc----CC-CCEEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------EGDIVSMYANTDLAQKELGWSARCT----HD-IDCVI 71 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------~~Dl~~~~~~~~~~~~~~~~~~~~~----~~-~d~Vi 71 (600)
|||++|++|+.+.+.. ...+.++.++.|+ .+|+.|++++.+ +++. .+ +|.|+
T Consensus 4 VtGatG~iG~~vv~~L--~~~g~~V~~~~R~~~~~~~~~~~~~~~d~~d~~~l~~---------a~~~~~~~~g~~d~v~ 72 (285)
T TIGR03649 4 LTGGTGKTASRIARLL--QAASVPFLVASRSSSSSAGPNEKHVKFDWLDEDTWDN---------PFSSDDGMEPEISAVY 72 (285)
T ss_pred EEcCCChHHHHHHHHH--HhCCCcEEEEeCCCccccCCCCccccccCCCHHHHHH---------HHhcccCcCCceeEEE
Confidence 7999999999996533 2223333333332 679999998888 5521 26 99999
Q ss_pred EcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q psy16545 72 HFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEE 151 (600)
Q Consensus 72 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~ 151 (600)
|+++... .. .....+++++|++.|++|||++||..++.. .+ ++...|+
T Consensus 73 ~~~~~~~-----~~--------~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~-------------~~------~~~~~~~ 120 (285)
T TIGR03649 73 LVAPPIP-----DL--------APPMIKFIDFARSKGVRRFVLLSASIIEKG-------------GP------AMGQVHA 120 (285)
T ss_pred EeCCCCC-----Ch--------hHHHHHHHHHHHHcCCCEEEEeeccccCCC-------------Cc------hHHHHHH
Confidence 9986431 11 234568999999999999999999654311 01 1233455
Q ss_pred HHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccc
Q psy16545 152 MLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFV 231 (600)
Q Consensus 152 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~ 231 (600)
++++. .+++++++||++++..... +.+....... ..+ +.+.|...+++++++|+++.+.
T Consensus 121 ~l~~~----~gi~~tilRp~~f~~~~~~---------------~~~~~~~~~~-~~~-~~~~g~~~~~~v~~~Dva~~~~ 179 (285)
T TIGR03649 121 HLDSL----GGVEYTVLRPTWFMENFSE---------------EFHVEAIRKE-NKI-YSATGDGKIPFVSADDIARVAY 179 (285)
T ss_pred HHHhc----cCCCEEEEeccHHhhhhcc---------------cccccccccC-CeE-EecCCCCccCcccHHHHHHHHH
Confidence 55432 2899999999988865211 0111112212 233 3466788899999999988766
Q ss_pred cccc
Q psy16545 232 NSVH 235 (600)
Q Consensus 232 ~a~~ 235 (600)
.++.
T Consensus 180 ~~l~ 183 (285)
T TIGR03649 180 RALT 183 (285)
T ss_pred HHhc
Confidence 5543
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.5e-08 Score=99.16 Aligned_cols=120 Identities=15% Similarity=-0.037 Sum_probs=89.4
Q ss_pred cccccChHHhhhHHhhhhccccccc-CCCCEEEEcCcccCc--------ccCCCChhhhHHhHHHHHHHHHHHHHHc--C
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFAAVKAV--------GESMQEPLMYYKNNLIATINLLEVMKSH--G 108 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~ 108 (600)
.+|++|++++.+++++ +.+. .++|++|||||.... ....+++...+++|+.++..+++++... .
T Consensus 65 ~~Dv~d~~~v~~~~~~-----~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 139 (257)
T PRK08594 65 PCDVTSDEEITACFET-----IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE 139 (257)
T ss_pred ecCCCCHHHHHHHHHH-----HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc
Confidence 6899999998886665 4443 259999999997531 1112334567899999999988887653 1
Q ss_pred CCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 109 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 109 ~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
-.++|++||....- +. +....|+.||.+.+.+++.++.++ .+++++.+.||.+-.+
T Consensus 140 ~g~Iv~isS~~~~~-----------~~-~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 197 (257)
T PRK08594 140 GGSIVTLTYLGGER-----------VV-QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTL 197 (257)
T ss_pred CceEEEEcccCCcc-----------CC-CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCH
Confidence 25899999964321 12 345789999999999999998876 3799999999988776
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.7e-08 Score=100.00 Aligned_cols=129 Identities=19% Similarity=0.022 Sum_probs=89.1
Q ss_pred cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecC
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSS 117 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS 117 (600)
.+|++|.+++.++++. +.+..++|+||||||... ...++...+++|+.++.++++++.+. .-+++|++||
T Consensus 55 ~~Dv~d~~~i~~~~~~-----~~~~g~id~li~nAG~~~---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS 126 (275)
T PRK06940 55 EVDVSSRESVKALAAT-----AQTLGPVTGLVHTAGVSP---SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIAS 126 (275)
T ss_pred EeecCCHHHHHHHHHH-----HHhcCCCCEEEECCCcCC---chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEe
Confidence 6899999988886554 211136999999999753 23567889999999999999998653 1135677777
Q ss_pred ccccCCCC-----CCC---CC-----------CCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 118 CTVYGEPQ-----FLP---IT-----------EDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 118 ~~vyg~~~-----~~~---~~-----------E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
........ ... ++ +.... .+...|+.||++.+.+++.++.++ .+++++.+.||.+..+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~ 205 (275)
T PRK06940 127 QSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIE-DSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTP 205 (275)
T ss_pred cccccCcccchhhhccccccccccccccccccccccC-CccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCc
Confidence 64332110 000 00 00001 135789999999999999988765 3799999999999877
Q ss_pred C
Q psy16545 177 H 177 (600)
Q Consensus 177 ~ 177 (600)
.
T Consensus 206 ~ 206 (275)
T PRK06940 206 L 206 (275)
T ss_pred c
Confidence 4
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.4e-08 Score=100.12 Aligned_cols=120 Identities=12% Similarity=0.007 Sum_probs=91.2
Q ss_pred cccccChHHhhhHHhhhhcccccccC-CCCEEEEcCcccCc--------ccCCCChhhhHHhHHHHHHHHHHHHHHc--C
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAAVKAV--------GESMQEPLMYYKNNLIATINLLEVMKSH--G 108 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~ 108 (600)
.+|+++.+++.+++++ +.+.. ++|++|||||.... ....+++...+++|+.++..+++++... .
T Consensus 66 ~~Dl~~~~~v~~~~~~-----~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~ 140 (272)
T PRK08159 66 HCDVTDEASIDAVFET-----LEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD 140 (272)
T ss_pred ecCCCCHHHHHHHHHH-----HHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 6899999999887665 44333 59999999997532 1122456779999999999999987653 2
Q ss_pred CCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 109 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 109 ~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
-.++|++||.+... +. +....|+.||.+.+.+++.++.++ .++++..+.||.+..+
T Consensus 141 ~g~Iv~iss~~~~~-----------~~-p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 198 (272)
T PRK08159 141 GGSILTLTYYGAEK-----------VM-PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTL 198 (272)
T ss_pred CceEEEEecccccc-----------CC-CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCH
Confidence 25899999864321 12 345789999999999999998876 3799999999998765
|
|
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.2e-08 Score=97.37 Aligned_cols=145 Identities=17% Similarity=0.042 Sum_probs=105.6
Q ss_pred cCCCCcchHHHHHHHh-hhc---------------------cC-CCccEEecccccccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTF-ERV---------------------TG-KPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~-~~~---------------------~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
.|||+++-+|+.++.- .++ .. .+++++ .||+++.+++.+.+++ +-++
T Consensus 42 LITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y-----~cdis~~eei~~~a~~-----Vk~e 111 (300)
T KOG1201|consen 42 LITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAY-----TCDISDREEIYRLAKK-----VKKE 111 (300)
T ss_pred EEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEE-----EecCCCHHHHHHHHHH-----HHHh
Confidence 3789999899998321 110 00 136677 8999999999998876 5444
Q ss_pred C-CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 65 H-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 ~-~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
. .+|++|||||.+.... +.++.+.++++|+.|.....++. .+.+-+++|.++|+..+- +.
T Consensus 112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~-----------g~ 180 (300)
T KOG1201|consen 112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLF-----------GP 180 (300)
T ss_pred cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhccc-----------CC
Confidence 4 4999999999985322 23455669999999999987775 454557999999975432 12
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc-----CCceEEEEeccccc
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH-----KEWNIISLRYFNPV 174 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~-----~~~~~~ilR~~~v~ 174 (600)
....+|+.||.++....+++..+. .+++.+.+.|+.+=
T Consensus 181 -~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~ 223 (300)
T KOG1201|consen 181 -AGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFIN 223 (300)
T ss_pred -ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecc
Confidence 456899999999998888877543 37899999887665
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.6e-08 Score=99.27 Aligned_cols=120 Identities=13% Similarity=0.030 Sum_probs=90.1
Q ss_pred cccccChHHhhhHHhhhhcccccccC-CCCEEEEcCcccCc--------ccCCCChhhhHHhHHHHHHHHHHHHHHc--C
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAAVKAV--------GESMQEPLMYYKNNLIATINLLEVMKSH--G 108 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~ 108 (600)
.+|++|++++.+++++ +.++. ++|++||+||.... ....+++...+++|+.++..+++++... .
T Consensus 64 ~~Dv~~~~~v~~~~~~-----~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~ 138 (260)
T PRK06603 64 ELDVTNPKSISNLFDD-----IKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD 138 (260)
T ss_pred EccCCCHHHHHHHHHH-----HHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 6899999998886665 44332 59999999997531 1123456678999999999999886432 1
Q ss_pred CCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 109 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 109 ~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
-.++|++||..... +. +....|+.||.+.+.+++.++.+. .+++++.+.||.+-.+
T Consensus 139 ~G~Iv~isS~~~~~-----------~~-~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 196 (260)
T PRK06603 139 GGSIVTLTYYGAEK-----------VI-PNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTL 196 (260)
T ss_pred CceEEEEecCcccc-----------CC-CcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcch
Confidence 25899999864321 12 345789999999999999999876 3799999999998766
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.8e-08 Score=99.10 Aligned_cols=121 Identities=12% Similarity=0.000 Sum_probs=89.0
Q ss_pred cccccChHHhhhHHhhhhccccccc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cC-C
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG-V 109 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~ 109 (600)
.+|+++++++.+++++ +.+. ..+|+||||||...... ..+++...+++|+.++..+++++.+ .+ .
T Consensus 75 ~~Dl~~~~~~~~~~~~-----~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 149 (262)
T PRK07831 75 VCDVTSEAQVDALIDA-----AVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHG 149 (262)
T ss_pred EccCCCHHHHHHHHHH-----HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence 6799998888775543 3222 26899999999753221 1234566889999999999888743 22 3
Q ss_pred CeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 110 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 110 ~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.++|++||...+- +. .+...|+.||.+.+.+++.++.+. .+++++.++||.+..|.
T Consensus 150 g~iv~~ss~~~~~-----------~~-~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~ 207 (262)
T PRK07831 150 GVIVNNASVLGWR-----------AQ-HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPF 207 (262)
T ss_pred cEEEEeCchhhcC-----------CC-CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcc
Confidence 5788888864321 12 456789999999999999998774 38999999999998874
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.2e-08 Score=98.36 Aligned_cols=120 Identities=12% Similarity=-0.001 Sum_probs=88.4
Q ss_pred cccccChHHhhhHHhhhhccccccc-CCCCEEEEcCcccCc--------ccCCCChhhhHHhHHHHHHHHHHHHHHc--C
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFAAVKAV--------GESMQEPLMYYKNNLIATINLLEVMKSH--G 108 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~ 108 (600)
.+|++|++++.+++++ +.+. .++|++|||||.... ....++....+++|+.++..+++++... .
T Consensus 63 ~~Dv~~~~~i~~~~~~-----~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~ 137 (256)
T PRK07889 63 ELDVTNEEHLASLADR-----VREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE 137 (256)
T ss_pred eCCCCCHHHHHHHHHH-----HHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc
Confidence 6899999998886665 4433 369999999997632 1122345567999999999998887543 1
Q ss_pred CCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 109 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 109 ~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
-.++|++|+....+ . +..+.|+.||.+.+.+++.++.+. .|++++.+.||.+-.+.
T Consensus 138 ~g~Iv~is~~~~~~------------~-~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 195 (256)
T PRK07889 138 GGSIVGLDFDATVA------------W-PAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLA 195 (256)
T ss_pred CceEEEEeeccccc------------C-CccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChh
Confidence 24788887643211 1 345679999999999999998875 38999999999997763
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.8e-08 Score=98.84 Aligned_cols=121 Identities=12% Similarity=-0.018 Sum_probs=90.5
Q ss_pred cccccChHHhhhHHhhhhccccccc-CCCCEEEEcCcccCc--------ccCCCChhhhHHhHHHHHHHHHHHHHHc--C
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFAAVKAV--------GESMQEPLMYYKNNLIATINLLEVMKSH--G 108 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~ 108 (600)
.+|++|.+++.+++++ +.+. .++|++|||||.... ..+.+++...+++|+.++..+++++... .
T Consensus 66 ~~D~~~~~~v~~~~~~-----~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~ 140 (258)
T PRK07533 66 PLDVREPGQLEAVFAR-----IAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN 140 (258)
T ss_pred ecCcCCHHHHHHHHHH-----HHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc
Confidence 6899999998886665 4433 259999999997532 1122456779999999999999987542 1
Q ss_pred CCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 109 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 109 ~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
-.++|++||....- +. ...+.|+.||.+.+.+++.++.+. .++++..+.||.+-.+.
T Consensus 141 ~g~Ii~iss~~~~~-----------~~-~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~ 199 (258)
T PRK07533 141 GGSLLTMSYYGAEK-----------VV-ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRA 199 (258)
T ss_pred CCEEEEEecccccc-----------CC-ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChh
Confidence 24799999864211 12 345789999999999999998875 38999999999887663
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.9e-08 Score=98.86 Aligned_cols=120 Identities=13% Similarity=-0.058 Sum_probs=90.4
Q ss_pred cccccChHHhhhHHhhhhccccccc-CCCCEEEEcCcccCcc---------cCCCChhhhHHhHHHHHHHHHHHHHHc--
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFAAVKAVG---------ESMQEPLMYYKNNLIATINLLEVMKSH-- 107 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~~~~~---------~~~~~~~~~~~~Nv~gt~~ll~a~~~~-- 107 (600)
.+|++|++++.+++++ +.+. .++|++|||||..... ...+++...+++|+.++..+++++...
T Consensus 62 ~~Dv~d~~~v~~~~~~-----~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~ 136 (260)
T PRK06997 62 PCDVASDEQIDALFAS-----LGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS 136 (260)
T ss_pred eccCCCHHHHHHHHHH-----HHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 6899999998886665 4333 2599999999975321 122355668999999999999887653
Q ss_pred CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 108 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 108 ~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.-+++|++||....- +. +..+.|+.||.+.+.+++.++.++ .+++++.+.||.+-.+
T Consensus 137 ~~g~Ii~iss~~~~~-----------~~-~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~ 195 (260)
T PRK06997 137 DDASLLTLSYLGAER-----------VV-PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTL 195 (260)
T ss_pred CCceEEEEecccccc-----------CC-CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccc
Confidence 225899999864321 12 345689999999999999999875 3799999999988765
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=7.1e-08 Score=95.02 Aligned_cols=119 Identities=18% Similarity=0.115 Sum_probs=90.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+.+++++.+|+.+.+++.++++.. ++|.|||+|+...... ...+....++.|+.++.++++.+. +.+
T Consensus 55 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 134 (249)
T PRK12825 55 GRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR 134 (249)
T ss_pred CCceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 456889999999999988877642 6899999999654322 233456778999999999998874 556
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.++||++||...+.... ....|+.+| ...+.+++.++.. .+++++.+||+.+
T Consensus 135 ~~~~i~~SS~~~~~~~~------------~~~~y~~sK---~~~~~~~~~~~~~~~~~~i~~~~i~pg~~ 189 (249)
T PRK12825 135 GGRIVNISSVAGLPGWP------------GRSNYAAAK---AGLVGLTKALARELAEYGITVNMVAPGDI 189 (249)
T ss_pred CCEEEEECccccCCCCC------------CchHHHHHH---HHHHHHHHHHHHHHhhcCeEEEEEEECCc
Confidence 78999999987763311 136799999 6677777777654 5899999998763
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.5e-08 Score=98.38 Aligned_cols=120 Identities=10% Similarity=-0.030 Sum_probs=88.6
Q ss_pred cccccChHHhhhHHhhhhcccccccC-CCCEEEEcCcccCcc---------cCCCChhhhHHhHHHHHHHHHHHHHHc--
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAAVKAVG---------ESMQEPLMYYKNNLIATINLLEVMKSH-- 107 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~~~~---------~~~~~~~~~~~~Nv~gt~~ll~a~~~~-- 107 (600)
.+|++|++++.+++++ +.+.. ++|++|||||..... ...+++...+++|+.++..+.+++...
T Consensus 62 ~~Dl~~~~~v~~~~~~-----~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 136 (262)
T PRK07984 62 PCDVAEDASIDAMFAE-----LGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN 136 (262)
T ss_pred ecCCCCHHHHHHHHHH-----HHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc
Confidence 6899999999886665 44433 589999999975321 112344567899999999998887532
Q ss_pred CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 108 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 108 ~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.-.++|++||.+... +. +....|+.||.+.+.+++.++.+. .++++..+.||.+-.+
T Consensus 137 ~~g~Iv~iss~~~~~-----------~~-~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~ 195 (262)
T PRK07984 137 PGSALLTLSYLGAER-----------AI-PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTL 195 (262)
T ss_pred CCcEEEEEecCCCCC-----------CC-CCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccch
Confidence 125799999864321 12 345689999999999999999875 3899999999988665
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.1e-08 Score=97.75 Aligned_cols=118 Identities=15% Similarity=0.109 Sum_probs=85.8
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHH----HHHHHHHH-HHc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIA----TINLLEVM-KSH 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~g----t~~ll~~~-~~~ 316 (600)
+..+.++.+|+++.+.+.++++. .++|+|||+|+...... ..+.....++.|+.+ +.++++++ ++.
T Consensus 55 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~ 134 (262)
T PRK13394 55 GGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD 134 (262)
T ss_pred CceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc
Confidence 34578899999999988887664 24899999999754322 223445677899999 67777777 666
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
+.+++|++||...+.. .+..+.|+.+| ...+.+++.++.. .+++++.+||+.
T Consensus 135 ~~~~iv~~ss~~~~~~------------~~~~~~y~~sk---~a~~~~~~~la~~~~~~~i~v~~v~pg~ 189 (262)
T PRK13394 135 RGGVVIYMGSVHSHEA------------SPLKSAYVTAK---HGLLGLARVLAKEGAKHNVRSHVVCPGF 189 (262)
T ss_pred CCcEEEEEcchhhcCC------------CCCCcccHHHH---HHHHHHHHHHHHHhhhcCeEEEEEeeCc
Confidence 7789999999654321 12236899999 6678888877765 478888888765
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=3e-08 Score=98.85 Aligned_cols=121 Identities=11% Similarity=-0.064 Sum_probs=88.8
Q ss_pred cccccChHHhhhHHhhhhcccccccC-CCCEEEEcCcccCcc---------cCCCChhhhHHhHHHHHHHHHHHHHHc--
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAAVKAVG---------ESMQEPLMYYKNNLIATINLLEVMKSH-- 107 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~~~~---------~~~~~~~~~~~~Nv~gt~~ll~a~~~~-- 107 (600)
.+|++|.+++.++.++ +.+.. ++|++|||||..... ...+.+...+++|+.++..+.+++...
T Consensus 62 ~~Dv~~~~~v~~~~~~-----~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~ 136 (261)
T PRK08690 62 RCDVASDDEINQVFAD-----LGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMR 136 (261)
T ss_pred ECCCCCHHHHHHHHHH-----HHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhh
Confidence 7899999999886665 44432 599999999986421 011234557889999999888875432
Q ss_pred -CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 108 -GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 108 -~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+-.++|++||..... +. +....|+.||.+.+.+++.++.+. .|++++.+.||.+-.+.
T Consensus 137 ~~~g~Iv~iss~~~~~-----------~~-~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~ 197 (261)
T PRK08690 137 GRNSAIVALSYLGAVR-----------AI-PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLA 197 (261)
T ss_pred hcCcEEEEEccccccc-----------CC-CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchh
Confidence 225799999865431 12 345789999999999999988765 38999999999997763
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.4e-08 Score=98.14 Aligned_cols=120 Identities=14% Similarity=0.012 Sum_probs=87.7
Q ss_pred cccccChHHhhhHHhhhhcccccccC-----CCCEEEEcCcccCcc-c------CCCChhhhHHhHHHHHHHHHHHHHHc
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTH-----DIDCVIHFAAVKAVG-E------SMQEPLMYYKNNLIATINLLEVMKSH 107 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~-----~~d~Vih~A~~~~~~-~------~~~~~~~~~~~Nv~gt~~ll~a~~~~ 107 (600)
.+|+++.+++.+++++ +.+.. +.|+||||||..... . ..++....+++|+.++..+++++.+.
T Consensus 61 ~~Dl~~~~~v~~~~~~-----~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~ 135 (256)
T TIGR01500 61 SLDLGAEAGLEQLLKA-----LRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKA 135 (256)
T ss_pred EeccCCHHHHHHHHHH-----HHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 7899999988886654 33221 236999999975321 1 12345678999999999888776432
Q ss_pred -----C-CCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 108 -----G-VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 108 -----~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+ .+++|++||...+. +. .....|+.||.+.+.+++.++.+. .++.++.+.||.+-.+
T Consensus 136 l~~~~~~~~~iv~isS~~~~~-----------~~-~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~ 200 (256)
T TIGR01500 136 FKDSPGLNRTVVNISSLCAIQ-----------PF-KGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTD 200 (256)
T ss_pred HhhcCCCCCEEEEECCHHhCC-----------CC-CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccch
Confidence 2 25899999975432 22 345789999999999999998775 4799999999998766
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=4.7e-08 Score=95.89 Aligned_cols=149 Identities=13% Similarity=0.086 Sum_probs=104.1
Q ss_pred cCCCCcchHHHHHHHhhhccC-----------------------CCccEEecccccccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-----------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-----------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|++|..+.+.....+ .+++++ .+|+.+.+++.+++++ +...
T Consensus 9 lItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~-----~~~~ 78 (238)
T PRK05786 9 AIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYV-----VGDVSSTESARNVIEK-----AAKV 78 (238)
T ss_pred EEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEE-----ECCCCCHHHHHHHHHH-----HHHH
Confidence 489999999999965432111 134555 7899999888775443 2211
Q ss_pred -CCCCEEEEcCcccCccc--CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAVGE--SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
.++|.+||+++...... ..++....+++|+.++..+++.+.+. .-.++|++||...... +. .+.
T Consensus 79 ~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----------~~-~~~ 147 (238)
T PRK05786 79 LNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK----------AS-PDQ 147 (238)
T ss_pred hCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc----------CC-CCc
Confidence 25899999998643211 11334567899999999988887553 1257999998643211 22 355
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
..|+.||.+.+.+++.++.+. .+++++++||++++++.
T Consensus 148 ~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~ 187 (238)
T PRK05786 148 LSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDF 187 (238)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCC
Confidence 789999999999998888764 48999999999999974
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.7e-08 Score=91.35 Aligned_cols=115 Identities=16% Similarity=0.095 Sum_probs=85.5
Q ss_pred cccccChHHhhhHHhhhhccccccc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEE
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHGVYQLVF 114 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~ 114 (600)
.+|+++.+.+.+++++ .... ..+|+|||+||...... ..+++...+++|+.++.++++++++.+.+++|+
T Consensus 59 ~~D~~~~~~~~~~~~~-----~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~ 133 (180)
T smart00822 59 ACDVADRAALAAALAA-----IPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVL 133 (180)
T ss_pred ECCCCCHHHHHHHHHH-----HHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEE
Confidence 6889888877775443 2221 25899999999754321 224456789999999999999998887789999
Q ss_pred ecCccc-cCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEeccccc
Q psy16545 115 SSSCTV-YGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPV 174 (600)
Q Consensus 115 ~SS~~v-yg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~ 174 (600)
+||... ++. .....|+.+|...+.+++.+... +++++.+.||.+-
T Consensus 134 ~ss~~~~~~~-------------~~~~~y~~sk~~~~~~~~~~~~~--~~~~~~~~~g~~~ 179 (180)
T smart00822 134 FSSVAGVLGN-------------PGQANYAAANAFLDALAAHRRAR--GLPATSINWGAWA 179 (180)
T ss_pred EccHHHhcCC-------------CCchhhHHHHHHHHHHHHHHHhc--CCceEEEeecccc
Confidence 998643 332 34578999999999999776543 8889999887654
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.3e-08 Score=98.98 Aligned_cols=149 Identities=13% Similarity=0.003 Sum_probs=100.4
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc-------------------cccccChHHhhhHHhhhhcccccccC----
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------------EGDIVSMYANTDLAQKELGWSARCTH---- 65 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~---- 65 (600)
|||++|.+|+.+.+.. ...+.+++.++|+ .+|+++.+++.++.++ +.+..
T Consensus 6 ItGasggiG~~ia~~l--~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~~~ 78 (251)
T PRK06924 6 ITGTSQGLGEAIANQL--LEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNE-----ILSSIQEDN 78 (251)
T ss_pred EecCCchHHHHHHHHH--HhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHH-----HHHhcCccc
Confidence 7899999999995432 1122222222221 6899999888775543 22211
Q ss_pred -CCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHH----Hc-CCCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMK----SH-GVYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 66 -~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~----~~-~~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
+..++||+||...+.. +.+++...+++|+.++..+++++. +. +.+++|++||...+. +
T Consensus 79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~ 147 (251)
T PRK06924 79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN-----------P 147 (251)
T ss_pred CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC-----------C
Confidence 1238999999864321 234456688899999777776653 32 346899999975432 2
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc----CCceEEEEecccccCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH----KEWNIISLRYFNPVGA 176 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~~~v~G~ 176 (600)
. .+.+.|+.+|.+.+.+++.++.+. .+++++.++||.+-.+
T Consensus 148 ~-~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 192 (251)
T PRK06924 148 Y-FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTN 192 (251)
T ss_pred C-CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccH
Confidence 3 457899999999999999988663 3799999999988765
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.81 E-value=3e-08 Score=98.68 Aligned_cols=120 Identities=13% Similarity=-0.001 Sum_probs=90.8
Q ss_pred cccccChHHhhhHHhhhhcccccccC-CCCEEEEcCcccCc--------ccCCCChhhhHHhHHHHHHHHHHHHHHc--C
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAAVKAV--------GESMQEPLMYYKNNLIATINLLEVMKSH--G 108 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~ 108 (600)
.+|++|++++.+++++ +.+.. ++|++|||||.... ....++++..+++|+.++..+++++... .
T Consensus 65 ~~Dl~d~~~v~~~~~~-----~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~ 139 (258)
T PRK07370 65 PCDVQDDAQIEETFET-----IKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE 139 (258)
T ss_pred ecCcCCHHHHHHHHHH-----HHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh
Confidence 6899999999886665 43332 59999999997531 1122456679999999999999887542 1
Q ss_pred CCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 109 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 109 ~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
-+++|++||..... +. +....|+.||.+.+.+++.++.++ .+++++.+.||.+-.+
T Consensus 140 ~g~Iv~isS~~~~~-----------~~-~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~ 197 (258)
T PRK07370 140 GGSIVTLTYLGGVR-----------AI-PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTL 197 (258)
T ss_pred CCeEEEEecccccc-----------CC-cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCc
Confidence 25899999964321 22 456789999999999999999876 3799999999999776
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.4e-08 Score=106.65 Aligned_cols=149 Identities=17% Similarity=0.092 Sum_probs=107.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d 68 (600)
-|||++|.+|..+.+.. ...+.+.+.+++. .+|+++.+++.++.+. +.+.. ++|
T Consensus 214 lItGasggIG~~la~~l--~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~-----~~~~~g~id 286 (450)
T PRK08261 214 LVTGAARGIGAAIAEVL--ARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEH-----LAERHGGLD 286 (450)
T ss_pred EEecCCCHHHHHHHHHH--HHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-----HHHhCCCCC
Confidence 58999999999996643 2334444444431 4799999888875554 33222 599
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHcC----CCeEEEecCcccc-CCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHG----VYQLVFSSSCTVY-GEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~----~~r~I~~SS~~vy-g~~~~~~~~E~~~~~~p~ 139 (600)
+|||+||...... ..+.+...+++|+.++.++.+++.... -.+||++||...+ +. ...
T Consensus 287 ~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~-------------~~~ 353 (450)
T PRK08261 287 IVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN-------------RGQ 353 (450)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-------------CCC
Confidence 9999999764321 234566789999999999999987642 2689999997543 32 345
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+.|+.+|.+.+.+++.++.+. .++.++.+.||.+-.+
T Consensus 354 ~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~ 392 (450)
T PRK08261 354 TNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQ 392 (450)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcch
Confidence 789999999999998887664 3899999999987543
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.9e-08 Score=99.49 Aligned_cols=152 Identities=11% Similarity=0.008 Sum_probs=103.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------------------------cccccChHHhhhHHhhh
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------------------------EGDIVSMYANTDLAQKE 56 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------------------~~Dl~~~~~~~~~~~~~ 56 (600)
-|||+++.+|..+++... ..+..++..+|+ .+|+++++++.+++++
T Consensus 12 lITGgs~GIG~aia~~la--~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~- 88 (305)
T PRK08303 12 LVAGATRGAGRGIAVELG--AAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVER- 88 (305)
T ss_pred EEeCCCchHHHHHHHHHH--HCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH-
Confidence 478999889988855332 222333322221 5799999998887665
Q ss_pred hcccccccC-CCCEEEEcC-cccC-----cc---cCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccc-c
Q psy16545 57 LGWSARCTH-DIDCVIHFA-AVKA-----VG---ESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTV-Y 121 (600)
Q Consensus 57 ~~~~~~~~~-~~d~Vih~A-~~~~-----~~---~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~v-y 121 (600)
+.+.. ++|++|||| |... .. ....++...+++|+.++..+++++.. .+-.++|++||... +
T Consensus 89 ----~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~ 164 (305)
T PRK08303 89 ----IDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEY 164 (305)
T ss_pred ----HHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccc
Confidence 44433 599999999 6421 10 11234556789999999999888743 23358999998532 2
Q ss_pred CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 122 GEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 122 g~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+.. +. .....|+.||.+...+++.++.+. .+++++.+.||.+-.+
T Consensus 165 ~~~---------~~-~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~ 211 (305)
T PRK08303 165 NAT---------HY-RLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE 211 (305)
T ss_pred cCc---------CC-CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence 110 11 234679999999999999998876 2799999999887654
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.1e-08 Score=111.51 Aligned_cols=147 Identities=12% Similarity=0.051 Sum_probs=103.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|.+|..+.+.. ...+.+++.++++ .+|+++.+++.+++++ +...
T Consensus 418 LVTGasggIG~aiA~~L--a~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~-----i~~~ 490 (676)
T TIGR02632 418 FVTGGAGGIGRETARRL--AAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFAD-----VALA 490 (676)
T ss_pred EEeCCCcHHHHHHHHHH--HhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHH-----HHHh
Confidence 58999999999986532 2223333333332 5899999888885554 3222
Q ss_pred C-CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcC-CCeEEEecCccc-cCCCCCCCCCCCC
Q psy16545 65 H-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG-VYQLVFSSSCTV-YGEPQFLPITEDH 133 (600)
Q Consensus 65 ~-~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~~r~I~~SS~~v-yg~~~~~~~~E~~ 133 (600)
. ++|+||||||...... ...++...+++|+.++..+++++. +.+ -.++|++||... ++.
T Consensus 491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~---------- 560 (676)
T TIGR02632 491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG---------- 560 (676)
T ss_pred cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC----------
Confidence 2 6999999999754322 123456688899999888875553 333 248999999643 332
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEeccccc
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPV 174 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~ 174 (600)
.....|+.||.+.+.+++.++.+. .+++++.++|+.|+
T Consensus 561 ---~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~ 600 (676)
T TIGR02632 561 ---KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL 600 (676)
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence 346899999999999999998875 37999999999887
|
|
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=6.7e-08 Score=97.58 Aligned_cols=159 Identities=16% Similarity=0.050 Sum_probs=112.8
Q ss_pred cCCCCcchHHHHHHHhhhcc--------------------------CCCccEEecccccccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVT--------------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~--------------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
-|||+|.-+|...++..... ...+.++ .+|+++.+++.++++++ .
T Consensus 39 vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~-----~lDLssl~SV~~fa~~~----~ 109 (314)
T KOG1208|consen 39 LVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVI-----QLDLSSLKSVRKFAEEF----K 109 (314)
T ss_pred EEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEE-----ECCCCCHHHHHHHHHHH----H
Confidence 37899988988775433221 2234445 79999999999977762 1
Q ss_pred cccCCCCEEEEcCcccCccc--CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCC--CCCCCCCCCC
Q psy16545 62 RCTHDIDCVIHFAAVKAVGE--SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGE--PQFLPITEDH 133 (600)
Q Consensus 62 ~~~~~~d~Vih~A~~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~--~~~~~~~E~~ 133 (600)
-.....|++|+|||+..... ..+..+..+.+|..|+..|.+++. +....|+|++||..- +. .......|..
T Consensus 110 ~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~ 188 (314)
T KOG1208|consen 110 KKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKA 188 (314)
T ss_pred hcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhc
Confidence 22346999999999986544 234578899999999999988864 333369999999753 21 1111122222
Q ss_pred C-CCCCCChHHHHHHHHHHHHHHHHhhcC-CceEEEEecccccCCC
Q psy16545 134 P-TGNIKNVYGKTKHFIEEMLKDLSKAHK-EWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~-~~~p~s~Y~~sK~~~e~~~~~~~~~~~-~~~~~ilR~~~v~G~~ 177 (600)
. . .....|+.||++....+.+++++.. |+.+..+.||.+..+.
T Consensus 189 ~~~-~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~ 233 (314)
T KOG1208|consen 189 KLY-SSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG 233 (314)
T ss_pred cCc-cchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence 2 2 2223599999999999999998875 7999999999999884
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.1e-07 Score=91.86 Aligned_cols=147 Identities=15% Similarity=0.145 Sum_probs=101.7
Q ss_pred CCCCcchHHHHHHHhhhc------------------------cCCCccEEecccccccccChHHhhhHHhhhhccccccc
Q psy16545 9 GTGQGTSVLQLLRTFERV------------------------TGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~------------------------~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
|||+++.+|+.+++.... ....+.++ .+|+.|.+++.+++++ +.+.
T Consensus 5 ItGas~GIG~aia~~l~~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~-----~~Dv~d~~~v~~~~~~-----~~~~ 74 (246)
T PRK05599 5 ILGGTSDIAGEIATLLCHGEDVVLAARRPEAAQGLASDLRQRGATSVHVL-----SFDAQDLDTHRELVKQ-----TQEL 74 (246)
T ss_pred EEeCccHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEE-----EcccCCHHHHHHHHHH-----HHHh
Confidence 678888888877542210 01124556 7899999998886665 4433
Q ss_pred -CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcC-CCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHG-VYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
.++|++|||||...... ...+....+++|+.+...+++++ .+.+ -+++|++||....- +
T Consensus 75 ~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-----------~ 143 (246)
T PRK05599 75 AGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR-----------A 143 (246)
T ss_pred cCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc-----------C
Confidence 25999999999864321 11223456778888888766554 3332 35899999964321 1
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .....|+.||.+.+.+++.++.+. .+++++.+.||.+..+.
T Consensus 144 ~-~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~ 187 (246)
T PRK05599 144 R-RANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSM 187 (246)
T ss_pred C-cCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchh
Confidence 2 345789999999999999998875 37999999999998774
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.8e-07 Score=92.58 Aligned_cols=118 Identities=12% Similarity=0.093 Sum_probs=88.6
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHH----HHcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~----~~~~ 317 (600)
+..+.++.+|+++.+++...++. .++|+|||+|+...... +.++....++.|+.++.++++++ ++.+
T Consensus 48 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 127 (275)
T PRK08263 48 GDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR 127 (275)
T ss_pred cCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 45688899999999988777664 26899999999764322 23456678899999998888876 4556
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.+++|++||.+.+.... ....|+.+| ...+.+.+.++.. ++++++.+||+.
T Consensus 128 ~~~iv~vsS~~~~~~~~------------~~~~Y~~sK---aa~~~~~~~la~e~~~~gi~v~~v~Pg~ 181 (275)
T PRK08263 128 SGHIIQISSIGGISAFP------------MSGIYHASK---WALEGMSEALAQEVAEFGIKVTLVEPGG 181 (275)
T ss_pred CCEEEEEcChhhcCCCC------------CccHHHHHH---HHHHHHHHHHHHHhhhhCcEEEEEecCC
Confidence 78999999987664321 136799999 6677777777654 689999999864
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.1e-07 Score=91.85 Aligned_cols=117 Identities=15% Similarity=0.086 Sum_probs=85.3
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc---CCC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH---GVY 319 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~---~~~ 319 (600)
..+.++.+|+++.+++..+++.. ++|+|||+|+...... ...++...++.|+.++.++++++... .-.
T Consensus 57 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~ 136 (249)
T PRK09135 57 GSAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRG 136 (249)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCe
Confidence 45788999999999988887742 5899999998643221 23445778999999999999999753 123
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh--CCCCeeEeecc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT--GNKPVPYIFYN 383 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~--~~~~~~~r~~~ 383 (600)
++++.||.. +..|..+ .+.|+.+| ...|.+++.+.+.. +++++.+||+.
T Consensus 137 ~~~~~~~~~-----------~~~~~~~-~~~Y~~sK---~~~~~~~~~l~~~~~~~i~~~~v~pg~ 187 (249)
T PRK09135 137 AIVNITDIH-----------AERPLKG-YPVYCAAK---AALEMLTRSLALELAPEVRVNAVAPGA 187 (249)
T ss_pred EEEEEeChh-----------hcCCCCC-chhHHHHH---HHHHHHHHHHHHHHCCCCeEEEEEecc
Confidence 566655522 2223333 37899999 77899999988765 57888888765
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=7.8e-08 Score=94.76 Aligned_cols=142 Identities=15% Similarity=0.082 Sum_probs=91.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHHhhhHHhhhhcccccccCCCCEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVI 71 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vi 71 (600)
-|||++|.+|+.+++.. ...+.+++.++++ .+|+++.+++.+ .+. ++|++|
T Consensus 18 lITGas~gIG~ala~~l--~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---------~~~--~iDilV 84 (245)
T PRK12367 18 GITGASGALGKALTKAF--RAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDK---------QLA--SLDVLI 84 (245)
T ss_pred EEEcCCcHHHHHHHHHH--HHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHH---------hcC--CCCEEE
Confidence 58999999999996633 2333344433332 468888877766 554 699999
Q ss_pred EcCcccCcc-cCCCChhhhHHhHHHHHHHHHHHHHHc-------CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHH
Q psy16545 72 HFAAVKAVG-ESMQEPLMYYKNNLIATINLLEVMKSH-------GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYG 143 (600)
Q Consensus 72 h~A~~~~~~-~~~~~~~~~~~~Nv~gt~~ll~a~~~~-------~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~ 143 (600)
||||..... ...+++...+++|+.++.++++++... +-..++..||.+... + ...+.|+
T Consensus 85 nnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~-----------~--~~~~~Y~ 151 (245)
T PRK12367 85 LNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ-----------P--ALSPSYE 151 (245)
T ss_pred ECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC-----------C--CCCchhH
Confidence 999975322 223567779999999999999987542 112344444433221 1 2346799
Q ss_pred HHHHHHHHHHHHHHh----h--cCCceEEEEecccccCC
Q psy16545 144 KTKHFIEEMLKDLSK----A--HKEWNIISLRYFNPVGA 176 (600)
Q Consensus 144 ~sK~~~e~~~~~~~~----~--~~~~~~~ilR~~~v~G~ 176 (600)
.||.+.+.+. .+.+ + ..++.+..+.||.+..+
T Consensus 152 aSKaal~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~~t~ 189 (245)
T PRK12367 152 ISKRLIGQLV-SLKKNLLDKNERKKLIIRKLILGPFRSE 189 (245)
T ss_pred HHHHHHHHHH-HHHHHHHHhhcccccEEEEecCCCcccc
Confidence 9999976543 3333 2 13778888888776544
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.2e-07 Score=89.64 Aligned_cols=118 Identities=10% Similarity=0.014 Sum_probs=86.6
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGV 318 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~ 318 (600)
.++.++.+|+.+..++.++++. ..+|+|||+|+...... ........++.|+.++.++++++.. .+.
T Consensus 56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 135 (247)
T PRK12935 56 HDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEE 135 (247)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 4588999999999998888775 25899999999754322 2245667889999999999999874 334
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.++|++||...+... +....|+.+| ...+.+++.+..+ .+++++.++|+.+
T Consensus 136 ~~iv~~sS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~l~~~~~~~~i~v~~v~pg~v 189 (247)
T PRK12935 136 GRIISISSIIGQAGG------------FGQTNYSAAK---AGMLGFTKSLALELAKTNVTVNAICPGFI 189 (247)
T ss_pred cEEEEEcchhhcCCC------------CCCcchHHHH---HHHHHHHHHHHHHHHHcCcEEEEEEeCCC
Confidence 699999996543211 1236899999 6677777777654 3788888876543
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.4e-07 Score=93.44 Aligned_cols=117 Identities=20% Similarity=0.242 Sum_probs=79.2
Q ss_pred CceeEEEeecCC-hhhHHHHh-hcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccc
Q psy16545 252 KKVDFYSCDLVD-KNRLGEIF-AKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 329 (600)
Q Consensus 252 ~~v~~i~~Dl~~-~~~l~~~l-~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~v 329 (600)
.+++++.+|+.+ ...+.+.+ . ++|+|||+++.... .++...++.|..++.++++++++.+++|||++||.++
T Consensus 62 ~~~~~~~~Dl~d~~~~l~~~~~~--~~d~vi~~~g~~~~----~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v 135 (251)
T PLN00141 62 PSLQIVRADVTEGSDKLVEAIGD--DSDAVICATGFRRS----FDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILV 135 (251)
T ss_pred CceEEEEeeCCCCHHHHHHHhhc--CCCEEEECCCCCcC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccc
Confidence 368899999998 45566655 3 78999999875321 1223345788899999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCcccc---cchhhHHHHHHHHHHHHHHhCCCCeeEeeccc
Q psy16545 330 YGEPQFLPITEDHPTGNIKNFYN---LGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL 384 (600)
Q Consensus 330 Yg~~~~~~~~E~~~~~~~~~~Y~---~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~ 384 (600)
||.....+.++.. .. .+.|+ .+| ..+|++++ ..+++++++||+.+
T Consensus 136 ~g~~~~~~~~~~~--~~-~~~~~~~~~~k---~~~e~~l~----~~gi~~~iirpg~~ 183 (251)
T PLN00141 136 NGAAMGQILNPAY--IF-LNLFGLTLVAK---LQAEKYIR----KSGINYTIVRPGGL 183 (251)
T ss_pred cCCCcccccCcch--hH-HHHHHHHHHHH---HHHHHHHH----hcCCcEEEEECCCc
Confidence 9854322221110 00 12232 234 45565544 46899999998764
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.4e-07 Score=93.86 Aligned_cols=144 Identities=15% Similarity=0.044 Sum_probs=101.6
Q ss_pred cCCCCcchHHHHHHHhhhcc-------------------------CCCccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVT-------------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~-------------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
-|||+++.+|+.+.+..... ..++.++ .+|+++++++.+++++ +
T Consensus 11 lItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-----~~D~~~~~~~~~~~~~------~ 79 (259)
T PRK06125 11 LITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVH-----ALDLSSPEAREQLAAE------A 79 (259)
T ss_pred EEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEE-----EecCCCHHHHHHHHHH------h
Confidence 47899999998885422111 1123444 6789998888874332 1
Q ss_pred ccCCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 63 CTHDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 63 ~~~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
..+|++|||||...... ..+++...+++|+.++..+++++. +.+..++|++||.... .+
T Consensus 80 --g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-----------~~ 146 (259)
T PRK06125 80 --GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGE-----------NP 146 (259)
T ss_pred --CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcccc-----------CC
Confidence 26999999999753211 223456789999999999988863 3344589999986321 12
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
. .....|+.+|.+.+.+++.++.+. .+++++.++||.+..+
T Consensus 147 ~-~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 189 (259)
T PRK06125 147 D-ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATD 189 (259)
T ss_pred C-CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence 2 345789999999999999987654 3899999999888766
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.6e-07 Score=91.42 Aligned_cols=147 Identities=7% Similarity=-0.077 Sum_probs=100.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||+++.+|+.+++.. ...+..++..+|+ .+|+.+.+++.+++++ +.+. .
T Consensus 9 lVtGas~GIG~aia~~l--a~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g 81 (227)
T PRK08862 9 LITSAGSVLGRTISCHF--ARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDA-----IEQQFN 81 (227)
T ss_pred EEECCccHHHHHHHHHH--HHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHH-----HHHHhC
Confidence 37888888998885422 2222222222221 5799999988886655 4443 2
Q ss_pred -CCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHH----HHcC-CCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVM----KSHG-VYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 66 -~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~-~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
++|++|||||...... ..++....+++|+.++..+++++ ++.+ -.++|++||...+
T Consensus 82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~------------- 148 (227)
T PRK08862 82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH------------- 148 (227)
T ss_pred CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-------------
Confidence 5999999998543221 11234457778888888776654 3332 3589999985321
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+...|+.||.+.+.+++.++.+. .++++..+.||.+-.+
T Consensus 149 --~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 149 --QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred --CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 234689999999999999998875 3899999999988876
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.8e-07 Score=91.89 Aligned_cols=116 Identities=14% Similarity=0.134 Sum_probs=84.9
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGV 318 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~----~~~~~ 318 (600)
..++++.+|+++++++.. ++. .++|+|||+|+...... ..++....+..|+.++.++++.+ ++.+.
T Consensus 54 ~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 132 (280)
T PRK06914 54 QNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKS 132 (280)
T ss_pred CceeEEecCCCCHHHHHH-HHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 468899999999988876 443 25799999998754322 22344567889999998888885 55567
Q ss_pred CEEEEecCcc-cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHH---HHhCCCCeeEeeccc
Q psy16545 319 YQLVFSSSCT-VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFE---RVTGNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~-vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~---~~~~~~~~~~r~~~~ 384 (600)
+++|++||.. ++|. +....|+.+| ...+.+++.++ ..++++++.+||+.+
T Consensus 133 ~~iv~vsS~~~~~~~-------------~~~~~Y~~sK---~~~~~~~~~l~~~~~~~~i~v~~v~pg~~ 186 (280)
T PRK06914 133 GKIINISSISGRVGF-------------PGLSPYVSSK---YALEGFSESLRLELKPFGIDVALIEPGSY 186 (280)
T ss_pred CEEEEECcccccCCC-------------CCCchhHHhH---HHHHHHHHHHHHHhhhhCCEEEEEecCCc
Confidence 8999999964 4432 1236899999 66778888776 346899999998653
|
|
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=98.70 E-value=5.1e-08 Score=87.88 Aligned_cols=150 Identities=11% Similarity=0.014 Sum_probs=105.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccC-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTH-D 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~ 66 (600)
.|||++.-+|++++.. +...++++.+.|++ .||+++++++....++ ..... .
T Consensus 18 ~vtGg~sGIGrAia~~--la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e-----~~k~~g~ 90 (256)
T KOG1200|consen 18 AVTGGSSGIGRAIAQL--LAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEE-----MEKSLGT 90 (256)
T ss_pred EEecCCchHHHHHHHH--HHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHH-----HHHhcCC
Confidence 3678877799999653 33344444444444 5899999888774444 33322 5
Q ss_pred CCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHHc----CC--CeEEEecCccc-cCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSH----GV--YQLVFSSSCTV-YGEPQFLPITEDHPT 135 (600)
Q Consensus 67 ~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~--~r~I~~SS~~v-yg~~~~~~~~E~~~~ 135 (600)
+++++||||+.... ...++|...+.+|+.|++.+.+++.+. +. -++|.+||+.- .|.
T Consensus 91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN------------ 158 (256)
T KOG1200|consen 91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGN------------ 158 (256)
T ss_pred CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccc------------
Confidence 99999999998542 244678889999999999999887543 22 38999999631 222
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
-..+.|+.||...-.+.+.++++. .++++..+-||.|-.|.
T Consensus 159 -~GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpM 201 (256)
T KOG1200|consen 159 -FGQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPM 201 (256)
T ss_pred -ccchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChh
Confidence 344678888876665555555443 28999999999999996
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.9e-07 Score=92.56 Aligned_cols=118 Identities=13% Similarity=0.140 Sum_probs=85.1
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcccc----ccChHHHHHHHHHHHHHHHHHH----HHcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVM----KSHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~~----~~~~ 317 (600)
+.++.++.+|+.+.+++..+++. .++|+|||+|+....... ..+....++.|+.++..+++++ ++.+
T Consensus 49 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 128 (255)
T TIGR01963 49 GGSVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG 128 (255)
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 35688999999999977765543 258999999987543222 2233456778999988888877 4567
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
++++|++||...+... +..+.|+.+| ...+.+++.+... .+++++.+||+.
T Consensus 129 ~~~~v~~ss~~~~~~~------------~~~~~y~~sk---~a~~~~~~~~~~~~~~~~i~v~~i~pg~ 182 (255)
T TIGR01963 129 WGRIINIASAHGLVAS------------PFKSAYVAAK---HGLIGLTKVLALEVAAHGITVNAICPGY 182 (255)
T ss_pred CeEEEEEcchhhcCCC------------CCCchhHHHH---HHHHHHHHHHHHHhhhcCeEEEEEecCc
Confidence 7899999997665431 1136799999 6677777776654 478888898876
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.2e-07 Score=90.90 Aligned_cols=147 Identities=14% Similarity=0.073 Sum_probs=102.6
Q ss_pred CCCCcchHHHHHHHhhhcc------------------CCCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEE
Q psy16545 9 GTGQGTSVLQLLRTFERVT------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCV 70 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~V 70 (600)
|||++|.+|..+++..... ..++.++ ++|+++.+++.++.++ +. ++|+|
T Consensus 5 ItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----~~Dls~~~~~~~~~~~------~~--~id~l 71 (235)
T PRK09009 5 IVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDFQHDNVQWH-----ALDVTDEAEIKQLSEQ------FT--QLDWL 71 (235)
T ss_pred EECCCChHHHHHHHHHHHhCCCCEEEEEccCCccccccCceEEE-----EecCCCHHHHHHHHHh------cC--CCCEE
Confidence 7999999999986532111 1234456 7999999888773332 22 69999
Q ss_pred EEcCcccCccc-----C-----CCChhhhHHhHHHHHHHHHHHHHHc----CCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 71 IHFAAVKAVGE-----S-----MQEPLMYYKNNLIATINLLEVMKSH----GVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 71 ih~A~~~~~~~-----~-----~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
|||||...... . .+.....+++|+.++..+++++... +..+++++||.. |.. .+ .+.
T Consensus 72 i~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~-----~~-~~~- 142 (235)
T PRK09009 72 INCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSI-----SD-NRL- 142 (235)
T ss_pred EECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--ccc-----cc-CCC-
Confidence 99999874211 1 1224468899999999998887542 346889998742 211 11 122
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc----CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH----KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~~~v~G~~ 177 (600)
.+...|+.||.+.+.+++.++.+. .+++++.+.||.+..+.
T Consensus 143 ~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~ 187 (235)
T PRK09009 143 GGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTAL 187 (235)
T ss_pred CCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCC
Confidence 356789999999999999998663 37889999999998774
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.2e-07 Score=93.44 Aligned_cols=117 Identities=14% Similarity=0.029 Sum_probs=85.5
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc-----ccccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
..+.++.+|+.+++++.+.++.. ++|++||+|+..... ...++....++.|+.++.++++++.+. +
T Consensus 58 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 137 (276)
T PRK05875 58 GAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG 137 (276)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 45788899999999888877643 689999999854211 122345667889999999999877653 3
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
..++|++||...+... +..++|+.+| ...|.+++.+.... +++++.+||+.
T Consensus 138 ~g~iv~~sS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~~~~~~~~~~i~v~~i~Pg~ 191 (276)
T PRK05875 138 GGSFVGISSIAASNTH------------RWFGAYGVTK---SAVDHLMKLAADELGPSWVRVNSIRPGL 191 (276)
T ss_pred CcEEEEEechhhcCCC------------CCCcchHHHH---HHHHHHHHHHHHHhcccCeEEEEEecCc
Confidence 3589999998775321 2237899999 77899999888664 46667777654
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=7.9e-07 Score=88.29 Aligned_cols=117 Identities=14% Similarity=0.061 Sum_probs=82.9
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccccc----cChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+..++++.+|+.+.+++...+... ++|+|||+++........ ......+..|+.++.++++++. +.+
T Consensus 48 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 127 (257)
T PRK07074 48 DARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS 127 (257)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 346889999999999888777642 589999999875432211 2223456799999988888884 345
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
.+++|++||...+... ....|+.+| ...+.+++.++.+. +++++.++|+.
T Consensus 128 ~~~iv~~sS~~~~~~~-------------~~~~y~~sK---~a~~~~~~~~a~~~~~~gi~v~~v~pg~ 180 (257)
T PRK07074 128 RGAVVNIGSVNGMAAL-------------GHPAYSAAK---AGLIHYTKLLAVEYGRFGIRANAVAPGT 180 (257)
T ss_pred CeEEEEEcchhhcCCC-------------CCcccHHHH---HHHHHHHHHHHHHHhHhCeEEEEEEeCc
Confidence 6789999996533210 014699999 66788888887654 68888888764
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=5.3e-07 Score=90.54 Aligned_cols=118 Identities=12% Similarity=0.114 Sum_probs=88.2
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcccc----ccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+....... ..+....++.|+.++.++++++.. .+
T Consensus 58 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~ 137 (274)
T PRK07775 58 GGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR 137 (274)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 345788899999999998877642 57999999987543221 234456679999999999988753 34
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
..+||++||...|... +....|+.+| ...|.+++.+.... +++++++||+.
T Consensus 138 ~g~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~l~~~~~~~~~~~gi~v~~v~pG~ 191 (274)
T PRK07775 138 RGDLIFVGSDVALRQR------------PHMGAYGAAK---AGLEAMVTNLQMELEGTGVRASIVHPGP 191 (274)
T ss_pred CceEEEECChHhcCCC------------CCcchHHHHH---HHHHHHHHHHHHHhcccCeEEEEEeCCc
Confidence 5689999998777532 1236799999 67888888887654 88999998754
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.66 E-value=4.8e-07 Score=89.36 Aligned_cols=119 Identities=14% Similarity=0.030 Sum_probs=89.4
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc----cccccChHHHHHHHHHHHHHHHHHHH----HcCC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV----GESMQEPLMYYKNNLIATINLLEVMK----SHGV 318 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~----~~~~ 318 (600)
..+.++.+|+.+.+++.+.++.. ++|+|||+++.... .....++...++.|+.++.++++++. +.+.
T Consensus 55 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 134 (251)
T PRK12826 55 GKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGG 134 (251)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 45889999999999888887642 68999999987654 22334556789999999999999874 4467
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
++||++||...++.. .+....|+.+| ...+.+++.+... .+++++.+||+.+
T Consensus 135 ~~ii~~ss~~~~~~~-----------~~~~~~y~~sK---~a~~~~~~~~~~~~~~~~i~~~~i~pg~~ 189 (251)
T PRK12826 135 GRIVLTSSVAGPRVG-----------YPGLAHYAASK---AGLVGFTRALALELAARNITVNSVHPGGV 189 (251)
T ss_pred cEEEEEechHhhccC-----------CCCccHHHHHH---HHHHHHHHHHHHHHHHcCeEEEEEeeCCC
Confidence 899999998766211 12236799999 6677888777654 4888899998763
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=6.8e-07 Score=88.66 Aligned_cols=119 Identities=18% Similarity=0.157 Sum_probs=88.1
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc------ccccChHHHHHHHHHHHHHHHHHHHHc---
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG------ESMQEPLMYYKNNLIATINLLEVMKSH--- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~------~~~~~~~~~~~~Nv~gt~~ll~~~~~~--- 316 (600)
+.++.++.+|+++..++.++++.. ++|+|||+|+..... .+.+.....++.|+.++.++++++...
T Consensus 51 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 130 (256)
T PRK12745 51 GVEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLA 130 (256)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHh
Confidence 346889999999999887776642 689999999864321 123455677899999999999887642
Q ss_pred --C-----CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 --G-----VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 --~-----~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+ +++||++||...+.... + ...|+.+| ...|.+++.++.. ++++++.++|+.+
T Consensus 131 ~~~~~~~~~~~iv~~sS~~~~~~~~-----------~-~~~Y~~sK---~a~~~~~~~l~~~~~~~gi~v~~i~pg~v 193 (256)
T PRK12745 131 QPEPEELPHRSIVFVSSVNAIMVSP-----------N-RGEYCISK---AGLSMAAQLFAARLAEEGIGVYEVRPGLI 193 (256)
T ss_pred ccCcCCCCCcEEEEECChhhccCCC-----------C-CcccHHHH---HHHHHHHHHHHHHHHHhCCEEEEEecCCC
Confidence 1 46799999976543211 1 36799999 6788888888764 6889999987653
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.61 E-value=8.7e-08 Score=93.78 Aligned_cols=167 Identities=19% Similarity=0.062 Sum_probs=105.4
Q ss_pred CCCCcchHHHHHHHhhhc--------------------cCCCccEEecccccccccChHHhhhHHhhhhcccccccCCCC
Q psy16545 9 GTGQGTSVLQLLRTFERV--------------------TGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDID 68 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~--------------------~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d 68 (600)
|+|++|.+|+.+.+.... ...+++++ .+|+.|.+++.+ +++ ++|
T Consensus 3 V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv-----~~d~~~~~~l~~---------al~--g~d 66 (233)
T PF05368_consen 3 VTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVV-----EADYDDPESLVA---------ALK--GVD 66 (233)
T ss_dssp EETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEE-----ES-TT-HHHHHH---------HHT--TCS
T ss_pred EECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEe-----ecccCCHHHHHH---------HHc--CCc
Confidence 789999999988443221 12345555 788999999988 887 999
Q ss_pred EEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q psy16545 69 CVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHF 148 (600)
Q Consensus 69 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~ 148 (600)
+||.+-+... ..-+....++++||++.|+++||+.|....+. +.... .|..+.-..|..
T Consensus 67 ~v~~~~~~~~------------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~--------~~~~~-~p~~~~~~~k~~ 125 (233)
T PF05368_consen 67 AVFSVTPPSH------------PSELEQQKNLIDAAKAAGVKHFVPSSFGADYD--------ESSGS-EPEIPHFDQKAE 125 (233)
T ss_dssp EEEEESSCSC------------CCHHHHHHHHHHHHHHHT-SEEEESEESSGTT--------TTTTS-TTHHHHHHHHHH
T ss_pred eEEeecCcch------------hhhhhhhhhHHHhhhccccceEEEEEeccccc--------ccccc-cccchhhhhhhh
Confidence 9998876542 11244577899999999999998644433221 11122 333455567888
Q ss_pred HHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHh--hcCCCCeEEEecCCcccccCc-ceEE
Q psy16545 149 IEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQV--AIGSKPHFTVFGADYETEDGT-GKVV 225 (600)
Q Consensus 149 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~g~g~~~~~~~-~v~d 225 (600)
.|+++++. +++++++|+|..+.. ++..+... .......+.+.+++.....+. ..+|
T Consensus 126 ie~~l~~~-----~i~~t~i~~g~f~e~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 184 (233)
T PF05368_consen 126 IEEYLRES-----GIPYTIIRPGFFMEN----------------LLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRD 184 (233)
T ss_dssp HHHHHHHC-----TSEBEEEEE-EEHHH----------------HHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHH
T ss_pred hhhhhhhc-----cccceeccccchhhh----------------hhhhhcccccccccceEEEEccCCCccccccccHHH
Confidence 88877663 889999999876643 33322331 221223578888888766675 7777
Q ss_pred eeeccccc
Q psy16545 226 AIDNFVNS 233 (600)
Q Consensus 226 ~v~~~~~a 233 (600)
+.+.....
T Consensus 185 vg~~va~i 192 (233)
T PF05368_consen 185 VGRAVAAI 192 (233)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66554433
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.2e-06 Score=86.69 Aligned_cols=117 Identities=14% Similarity=0.045 Sum_probs=87.1
Q ss_pred CceeEEEeecCChhhHHHHhhc-----------CCccEEEEcccccCcccccc----ChHHHHHHHHHHHHHHHHHHHHc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----------HDIDCVIHFAAVKAVGESMQ----EPLMYYKNNLIATINLLEVMKSH 316 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----------~~~d~VihlAa~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~~~~~ 316 (600)
..++++.+|+++.+++.++++. .++|++||+|+........+ .....++.|+.++.++++++.+.
T Consensus 56 ~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 135 (254)
T PRK12746 56 GKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPL 135 (254)
T ss_pred CcEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4578899999999998887764 25899999998754332222 22456779999999999998864
Q ss_pred --CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 317 --GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 317 --~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
..+++|++||..++... +....|+.+| ...|.+++.+... .+++++.++|+.
T Consensus 136 ~~~~~~~v~~sS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~~~~~~~~~~i~v~~v~pg~ 192 (254)
T PRK12746 136 LRAEGRVINISSAEVRLGF------------TGSIAYGLSK---GALNTMTLPLAKHLGERGITVNTIMPGY 192 (254)
T ss_pred hhcCCEEEEECCHHhcCCC------------CCCcchHhhH---HHHHHHHHHHHHHHhhcCcEEEEEEECC
Confidence 33589999998877431 1236799999 6678888777764 568888888765
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=4.4e-07 Score=90.16 Aligned_cols=118 Identities=16% Similarity=0.126 Sum_probs=87.1
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHcC----
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHG---- 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~~---- 317 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+...... ..++....++.|+.++.++++++...-
T Consensus 51 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 130 (257)
T PRK07067 51 GPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQG 130 (257)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcC
Confidence 446888999999999988877652 5899999998753222 234556778999999999999987531
Q ss_pred -CCEEEEecCcc-cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 -VYQLVFSSSCT-VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 -~~r~v~~SS~~-vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
-.++|++||.. .++. +....|+.+| ...+.+++.++.. ++++++.++|+.+
T Consensus 131 ~~~~iv~~sS~~~~~~~-------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~i~pg~v 186 (257)
T PRK07067 131 RGGKIINMASQAGRRGE-------------ALVSHYCATK---AAVISYTQSAALALIRHGINVNAIAPGVV 186 (257)
T ss_pred CCcEEEEeCCHHhCCCC-------------CCCchhhhhH---HHHHHHHHHHHHHhcccCeEEEEEeeCcc
Confidence 14899999953 3332 1237899999 6678888877763 5788888887763
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=6.2e-07 Score=88.58 Aligned_cols=113 Identities=17% Similarity=0.107 Sum_probs=85.7
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc-------cccccChHHHHHHHHHHHHHHHHHHHHc---
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV-------GESMQEPLMYYKNNLIATINLLEVMKSH--- 316 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~-------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~--- 316 (600)
..+.++.+|+++..++.++++.. ++|+|||+|+.... .....+....++.|+.++.++++++...
T Consensus 55 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 134 (250)
T PRK07774 55 GTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAK 134 (250)
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 35678899999999887766642 58999999997431 1233455677899999999999988854
Q ss_pred -CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeec
Q psy16545 317 -GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFY 382 (600)
Q Consensus 317 -~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~ 382 (600)
+.+++|++||...|+. .+.|+.|| ...|.+++.+.++. +++++.++|+
T Consensus 135 ~~~~~iv~~sS~~~~~~---------------~~~Y~~sK---~a~~~~~~~l~~~~~~~~i~v~~v~pg 186 (250)
T PRK07774 135 RGGGAIVNQSSTAAWLY---------------SNFYGLAK---VGLNGLTQQLARELGGMNIRVNAIAPG 186 (250)
T ss_pred hCCcEEEEEecccccCC---------------ccccHHHH---HHHHHHHHHHHHHhCccCeEEEEEecC
Confidence 3569999999887641 26799999 77888988888764 5667777654
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.59 E-value=1e-06 Score=92.44 Aligned_cols=138 Identities=12% Similarity=0.048 Sum_probs=86.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccCCCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTHDIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~ 69 (600)
.|||++|.+|+++.+.. ...+.+++.++++ .+|++|.+++.+ .+. ++|+
T Consensus 182 LITGASgGIG~aLA~~L--a~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~---------~l~--~IDi 248 (406)
T PRK07424 182 AVTGASGTLGQALLKEL--HQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAE---------LLE--KVDI 248 (406)
T ss_pred EEeCCCCHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHH---------HhC--CCCE
Confidence 58999999999996532 2233333333322 467888777766 554 7999
Q ss_pred EEEcCcccCc-ccCCCChhhhHHhHHHHHHHHHHHHHH----cCC---C-eEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 70 VIHFAAVKAV-GESMQEPLMYYKNNLIATINLLEVMKS----HGV---Y-QLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 70 Vih~A~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~---~-r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+|||||.... ....++....+++|+.|+.++++++.+ .+. + .+|.+|+.. . .+ ...+
T Consensus 249 LInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~------------~~-~~~~ 314 (406)
T PRK07424 249 LIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-V------------NP-AFSP 314 (406)
T ss_pred EEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-c------------cC-CCch
Confidence 9999997532 222345677899999999999999743 221 2 244554421 1 11 2235
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCceEEEEecccc
Q psy16545 141 VYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNP 173 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v 173 (600)
.|+.||.+.+.+.+ +.++..+..+..+.||.+
T Consensus 315 ~Y~ASKaAl~~l~~-l~~~~~~~~I~~i~~gp~ 346 (406)
T PRK07424 315 LYELSKRALGDLVT-LRRLDAPCVVRKLILGPF 346 (406)
T ss_pred HHHHHHHHHHHHHH-HHHhCCCCceEEEEeCCC
Confidence 79999999988764 333222555555555443
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.6e-07 Score=91.75 Aligned_cols=113 Identities=11% Similarity=-0.037 Sum_probs=81.7
Q ss_pred HhhhHHhhhhcccccccC-CCCEEEEcCcccC----c--ccCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCc
Q psy16545 48 ANTDLAQKELGWSARCTH-DIDCVIHFAAVKA----V--GESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSC 118 (600)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~~----~--~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~ 118 (600)
++.+++++ +.+.. ++|++|||||... + ....+++...+++|+.++..+++++... .-.++|++||.
T Consensus 106 ~v~~l~~~-----i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~II~isS~ 180 (303)
T PLN02730 106 TVQEVAES-----VKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGASISLTYI 180 (303)
T ss_pred HHHHHHHH-----HHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEech
Confidence 56665554 43332 5999999997532 1 1223567789999999999999887553 12589999996
Q ss_pred cccCCCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHHhhc---CCceEEEEecccccCCC
Q psy16545 119 TVYGEPQFLPITEDHPTGNIK-NVYGKTKHFIEEMLKDLSKAH---KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 119 ~vyg~~~~~~~~E~~~~~~p~-s~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~~ 177 (600)
...-. . +.. ..|+.||.+.+.+.+.++.++ .+++++.+.||.+-.+.
T Consensus 181 a~~~~-----------~-p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~ 231 (303)
T PLN02730 181 ASERI-----------I-PGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRA 231 (303)
T ss_pred hhcCC-----------C-CCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCch
Confidence 53211 1 223 479999999999999999876 27999999999887764
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.59 E-value=3.8e-07 Score=89.23 Aligned_cols=109 Identities=18% Similarity=0.113 Sum_probs=69.5
Q ss_pred HHhhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Q psy16545 246 IEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSS 325 (600)
Q Consensus 246 ~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~S 325 (600)
..++...+++++.+|+.+.+.+.++++ ++|+||.+-+... ..-.....+++++|++.|+++||+.|
T Consensus 37 ~~~l~~~g~~vv~~d~~~~~~l~~al~--g~d~v~~~~~~~~------------~~~~~~~~~li~Aa~~agVk~~v~ss 102 (233)
T PF05368_consen 37 AQQLQALGAEVVEADYDDPESLVAALK--GVDAVFSVTPPSH------------PSELEQQKNLIDAAKAAGVKHFVPSS 102 (233)
T ss_dssp HHHHHHTTTEEEES-TT-HHHHHHHHT--TCSEEEEESSCSC------------CCHHHHHHHHHHHHHHHT-SEEEESE
T ss_pred hhhhhcccceEeecccCCHHHHHHHHc--CCceEEeecCcch------------hhhhhhhhhHHHhhhccccceEEEEE
Confidence 344445678899999999999999999 8999998865432 11244567899999999999999866
Q ss_pred CcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeeccc
Q psy16545 326 SCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL 384 (600)
Q Consensus 326 S~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~ 384 (600)
....+. +.....|. .+.-..| ...|+.+ +..+++++++|++.+
T Consensus 103 ~~~~~~--------~~~~~~p~-~~~~~~k---~~ie~~l----~~~~i~~t~i~~g~f 145 (233)
T PF05368_consen 103 FGADYD--------ESSGSEPE-IPHFDQK---AEIEEYL----RESGIPYTIIRPGFF 145 (233)
T ss_dssp ESSGTT--------TTTTSTTH-HHHHHHH---HHHHHHH----HHCTSEBEEEEE-EE
T ss_pred eccccc--------cccccccc-chhhhhh---hhhhhhh----hhccccceeccccch
Confidence 655442 11111121 2222234 3344444 445999999998765
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.9e-07 Score=89.89 Aligned_cols=122 Identities=17% Similarity=0.058 Sum_probs=91.3
Q ss_pred cccccChHHhhhHHhhhhccccccc-C-CCCEEEEcCcccCcc-----cCCCChhhhHHhHHHH-HHHHHHHHHHc----
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCT-H-DIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIA-TINLLEVMKSH---- 107 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~-~-~~d~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~g-t~~ll~a~~~~---- 107 (600)
.+|+++.+.++++.++ .++. . ++|++||+||..... .+.+.+...+++|+.| ...+.+++...
T Consensus 66 ~~Dv~~~~~~~~l~~~-----~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~ 140 (270)
T KOG0725|consen 66 VCDVSKEVDVEKLVEF-----AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKS 140 (270)
T ss_pred ECcCCCHHHHHHHHHH-----HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhc
Confidence 7899998888887766 5554 2 599999999987543 2345677799999995 66666665432
Q ss_pred CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 108 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 108 ~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+-..++++||...+... +. .+ ..|+.||.+.+++.+.++.++ .++++..+-||.|..+-
T Consensus 141 ~gg~I~~~ss~~~~~~~---------~~-~~-~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 141 KGGSIVNISSVAGVGPG---------PG-SG-VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred CCceEEEEeccccccCC---------CC-Cc-ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 34578888887544321 11 22 789999999999999999887 38999999999999884
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.5e-06 Score=83.93 Aligned_cols=119 Identities=11% Similarity=0.044 Sum_probs=88.1
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccccc----cChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+.++.++.+|+++.+++.++++.. ++|+|||+|+........ .+....++.|+.++.++++++. +.+
T Consensus 49 ~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~ 128 (277)
T PRK06180 49 PDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR 128 (277)
T ss_pred CCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC
Confidence 456788999999999888877642 589999999975433222 2334568999999999999854 345
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.+++|++||.+.+... |....|+.+| ...|.+++.++.. ++++++.+||+.+
T Consensus 129 ~~~iv~iSS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~i~Pg~v 183 (277)
T PRK06180 129 RGHIVNITSMGGLITM------------PGIGYYCGSK---FALEGISESLAKEVAPFGIHVTAVEPGSF 183 (277)
T ss_pred CCEEEEEecccccCCC------------CCcchhHHHH---HHHHHHHHHHHHHhhhhCcEEEEEecCCc
Confidence 5799999997655321 1247899999 6678888777754 5899999998753
|
|
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=98.55 E-value=6.5e-07 Score=87.59 Aligned_cols=125 Identities=13% Similarity=0.033 Sum_probs=94.4
Q ss_pred CCCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcc-----cCCCChhhhHHhHHHHHHHHHH
Q psy16545 28 GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLE 102 (600)
Q Consensus 28 ~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~ 102 (600)
+++...+ ..|+++++++++.++. ....+.+.+.-.||||||+.... ...++....+++|+.|+..+.+
T Consensus 75 s~rl~t~-----~LDVT~~esi~~a~~~--V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~ 147 (322)
T KOG1610|consen 75 SPRLRTL-----QLDVTKPESVKEAAQW--VKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTK 147 (322)
T ss_pred CCcceeE-----eeccCCHHHHHHHHHH--HHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHH
Confidence 4567777 8999999999886664 11123345688999999976331 1336778899999999999998
Q ss_pred HHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecc
Q psy16545 103 VMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYF 171 (600)
Q Consensus 103 a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~ 171 (600)
++... .-+|+|++||.. |. .+. +...+|+.||.+.|.+...+.++. .|+++.++=||
T Consensus 148 ~~lpLlr~arGRvVnvsS~~--GR---------~~~-p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG 209 (322)
T KOG1610|consen 148 AFLPLLRRARGRVVNVSSVL--GR---------VAL-PALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG 209 (322)
T ss_pred HHHHHHHhccCeEEEecccc--cC---------ccC-cccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC
Confidence 87432 235999999964 21 122 457899999999999999888775 49999999998
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.7e-07 Score=85.04 Aligned_cols=109 Identities=17% Similarity=0.175 Sum_probs=84.2
Q ss_pred CCccEEecccccccccChHHhhhHHhhhhccccccc-CCCCEEEEcCcccCcccC----CCChhhhHHhHHHHHHHHHHH
Q psy16545 29 KPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEV 103 (600)
Q Consensus 29 ~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a 103 (600)
.+++++ ++|+++.+++.+++++ +... ..+|++|||||....... .++....+++|+.++..+.++
T Consensus 52 ~~~~~~-----~~D~~~~~~~~~~~~~-----~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 121 (167)
T PF00106_consen 52 AKITFI-----ECDLSDPESIRALIEE-----VIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKA 121 (167)
T ss_dssp SEEEEE-----ESETTSHHHHHHHHHH-----HHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccccc-----cccccccccccccccc-----cccccccccccccccccccccccccccchhhhhccccccceeeeeeeh
Confidence 345666 7999999998887665 4422 369999999999763221 234557999999999999999
Q ss_pred HHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy16545 104 MKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKA 159 (600)
Q Consensus 104 ~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~ 159 (600)
+..++-+++|++||....- +. +....|+.||.+.+.+++.++++
T Consensus 122 ~~~~~~g~iv~~sS~~~~~-----------~~-~~~~~Y~askaal~~~~~~la~e 165 (167)
T PF00106_consen 122 LLPQGGGKIVNISSIAGVR-----------GS-PGMSAYSASKAALRGLTQSLAAE 165 (167)
T ss_dssp HHHHTTEEEEEEEEGGGTS-----------SS-TTBHHHHHHHHHHHHHHHHHHHH
T ss_pred heeccccceEEecchhhcc-----------CC-CCChhHHHHHHHHHHHHHHHHHh
Confidence 9886667999999975432 22 45678999999999999999876
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.1e-07 Score=91.49 Aligned_cols=120 Identities=14% Similarity=0.066 Sum_probs=93.0
Q ss_pred cccccChHHhhhHHhhhhccccccc--CCCCEEEEcCcccCc---cc-----CCCChhhhHHhHHHHHHHHHHHHHHc--
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCT--HDIDCVIHFAAVKAV---GE-----SMQEPLMYYKNNLIATINLLEVMKSH-- 107 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~--~~~d~Vih~A~~~~~---~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~-- 107 (600)
.+|+++++++.+++++ +.+. .++|++||+|+.... .. ..+++...+++|+.++..+++++.+.
T Consensus 50 ~~D~~~~~~v~~~~~~-----~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (241)
T PF13561_consen 50 QCDLSDEESVEALFDE-----AVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMK 124 (241)
T ss_dssp ESCTTSHHHHHHHHHH-----HHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred eecCcchHHHHHHHHH-----HHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999997766 5554 369999999998654 11 12356678999999999999988542
Q ss_pred CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc-C--CceEEEEecccccCC
Q psy16545 108 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH-K--EWNIISLRYFNPVGA 176 (600)
Q Consensus 108 ~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~-~--~~~~~ilR~~~v~G~ 176 (600)
.-.++|++||..... +. .....|+.+|.+.+.+++.++.++ + |++++.|.||.+..+
T Consensus 125 ~~gsii~iss~~~~~-----------~~-~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~ 184 (241)
T PF13561_consen 125 KGGSIINISSIAAQR-----------PM-PGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETP 184 (241)
T ss_dssp HEEEEEEEEEGGGTS-----------BS-TTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSH
T ss_pred hCCCcccccchhhcc-----------cC-ccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceecc
Confidence 115799999875432 12 455699999999999999998776 3 799999999998876
|
... |
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=2e-06 Score=87.61 Aligned_cols=119 Identities=13% Similarity=0.155 Sum_probs=90.3
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc-----cccChHHHHHHHHHHHHHHHHHHHHc--CC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSH--GV 318 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~ 318 (600)
+..+.++.+|+.+.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++... .-
T Consensus 105 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 184 (300)
T PRK06128 105 GRKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG 184 (300)
T ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC
Confidence 456788999999999888877642 6899999998643222 33466788999999999999999864 22
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.++|++||...|.... ....|+.|| ...+.+++.++.. .|+++..++|+.+
T Consensus 185 ~~iv~~sS~~~~~~~~------------~~~~Y~asK---~a~~~~~~~la~el~~~gI~v~~v~PG~i 238 (300)
T PRK06128 185 ASIINTGSIQSYQPSP------------TLLDYASTK---AAIVAFTKALAKQVAEKGIRVNAVAPGPV 238 (300)
T ss_pred CEEEEECCccccCCCC------------CchhHHHHH---HHHHHHHHHHHHHhhhcCcEEEEEEECcC
Confidence 5999999988875321 135699999 6678888888765 5788888887653
|
|
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.1e-06 Score=81.66 Aligned_cols=134 Identities=16% Similarity=0.090 Sum_probs=96.2
Q ss_pred CCCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCC-----CChhhhHHhHHHHHHHHHH
Q psy16545 28 GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESM-----QEPLMYYKNNLIATINLLE 102 (600)
Q Consensus 28 ~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~-----~~~~~~~~~Nv~gt~~ll~ 102 (600)
.++++++ +.|+++.+++.+++++ ...++...+++++|+|||..-..... ..+...+++|+.++..+.+
T Consensus 53 d~rvHii-----~Ldvt~deS~~~~~~~--V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q 125 (249)
T KOG1611|consen 53 DSRVHII-----QLDVTCDESIDNFVQE--VEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQ 125 (249)
T ss_pred CCceEEE-----EEecccHHHHHHHHHH--HHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHH
Confidence 5688999 9999999998886665 11133335799999999987443222 2345689999999999887
Q ss_pred HH----HHcCC-----------CeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC--CceE
Q psy16545 103 VM----KSHGV-----------YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHK--EWNI 165 (600)
Q Consensus 103 a~----~~~~~-----------~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~--~~~~ 165 (600)
++ ++... ..+|++||.+.- +. .... .+...|..||.+.....++++-+.. ++-+
T Consensus 126 ~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s-------~~-~~~~-~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv 196 (249)
T KOG1611|consen 126 AFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS-------IG-GFRP-GGLSAYRMSKAALNMFAKSLSVDLKDDHILV 196 (249)
T ss_pred HHHHHHHHHhhcccCCcccccceeEEEeeccccc-------cC-CCCC-cchhhhHhhHHHHHHHHHHhhhhhcCCcEEE
Confidence 75 22222 268889886432 11 1122 5779999999999999999886653 6778
Q ss_pred EEEecccccCCC
Q psy16545 166 ISLRYFNPVGAH 177 (600)
Q Consensus 166 ~ilR~~~v~G~~ 177 (600)
+.++||+|--.+
T Consensus 197 ~sihPGwV~TDM 208 (249)
T KOG1611|consen 197 VSIHPGWVQTDM 208 (249)
T ss_pred EEecCCeEEcCC
Confidence 999999998775
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.1e-06 Score=87.09 Aligned_cols=118 Identities=14% Similarity=0.042 Sum_probs=82.6
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccccc----cChHHHHHHHHHHHHHHH----HHHHHcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLL----EVMKSHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~~~----~~~~~~~~~Nv~gt~~ll----~~~~~~~ 317 (600)
+.+++++.+|+.+.+++.++++.. ++|+|||+|+........ .+....++.|+.++.+++ .++++.+
T Consensus 52 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 131 (258)
T PRK12429 52 GGKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG 131 (258)
T ss_pred CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC
Confidence 456889999999999988877642 689999999875443222 233456778988855544 4445567
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.++||++||...+... +..+.|+.+| ...+.+++.+..+ .++++..+||+.
T Consensus 132 ~~~iv~iss~~~~~~~------------~~~~~y~~~k---~a~~~~~~~l~~~~~~~~i~v~~~~pg~ 185 (258)
T PRK12429 132 GGRIINMASVHGLVGS------------AGKAAYVSAK---HGLIGLTKVVALEGATHGVTVNAICPGY 185 (258)
T ss_pred CeEEEEEcchhhccCC------------CCcchhHHHH---HHHHHHHHHHHHHhcccCeEEEEEecCC
Confidence 7899999997654321 1237899999 5567777777654 467777888765
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=2.2e-06 Score=84.98 Aligned_cols=117 Identities=11% Similarity=0.037 Sum_probs=87.1
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcccc----ccChHHHHHHHHHHHHHHHHHHHHc----CC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMKSH----GV 318 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~~~~~----~~ 318 (600)
.++.++.+|+.+.+++.++++.. ++|++||+|+....... .++....+..|+.++.++++++.+. +.
T Consensus 59 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 138 (255)
T PRK07523 59 LSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGA 138 (255)
T ss_pred ceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC
Confidence 45788999999999988887642 48999999997543222 2233566789999999999988753 46
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHH---HhCCCCeeEeecc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER---VTGNKPVPYIFYN 383 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~---~~~~~~~~~r~~~ 383 (600)
+++|++||...+.. .+....|+.+| ...+.+++.++. .+++++..+||+.
T Consensus 139 g~iv~iss~~~~~~------------~~~~~~y~~sK---~a~~~~~~~~a~e~~~~gi~v~~i~pg~ 191 (255)
T PRK07523 139 GKIINIASVQSALA------------RPGIAPYTATK---GAVGNLTKGMATDWAKHGLQCNAIAPGY 191 (255)
T ss_pred eEEEEEccchhccC------------CCCCccHHHHH---HHHHHHHHHHHHHhhHhCeEEEEEEECc
Confidence 79999999654321 11236899999 667888888875 4588888888765
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.6e-06 Score=85.67 Aligned_cols=116 Identities=8% Similarity=-0.079 Sum_probs=83.7
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccccc----cChHHHHHHHHHHHHHHHHHHHHc--CCCE
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEVMKSH--GVYQ 320 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~~~~~--~~~r 320 (600)
..+.++.+|+++..++..+++. .++|+|||+|+........ ......++.|+.++.++++++.+. ..++
T Consensus 56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 135 (252)
T PRK06077 56 GEGIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGA 135 (252)
T ss_pred CeeEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcE
Confidence 3567889999999988777664 2689999999974433222 122466899999999999988864 2358
Q ss_pred EEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh--CCCCeeEeec
Q psy16545 321 LVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT--GNKPVPYIFY 382 (600)
Q Consensus 321 ~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~--~~~~~~~r~~ 382 (600)
||++||...|... +..+.|+.+| ...|.+++.+.++. ++.+..++|+
T Consensus 136 iv~~sS~~~~~~~------------~~~~~Y~~sK---~~~~~~~~~l~~~~~~~i~v~~v~Pg 184 (252)
T PRK06077 136 IVNIASVAGIRPA------------YGLSIYGAMK---AAVINLTKYLALELAPKIRVNAIAPG 184 (252)
T ss_pred EEEEcchhccCCC------------CCchHHHHHH---HHHHHHHHHHHHHHhcCCEEEEEeeC
Confidence 9999998877421 2237899999 67889999888775 3455555544
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.2e-06 Score=82.20 Aligned_cols=119 Identities=13% Similarity=0.098 Sum_probs=85.9
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+..+.++.+|+.+++++.++++. ..+|+|||+++...... ...+....++.|+.++.++++++. +.+
T Consensus 53 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 132 (246)
T PRK05653 53 GGEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR 132 (246)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 44678899999999988887764 25799999998754321 122345678899999999998885 456
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.++||++||...... ..+ ...|+.+| ...+.+++.+.+. .+++++.+||+.+
T Consensus 133 ~~~ii~~ss~~~~~~-----------~~~-~~~y~~sk---~~~~~~~~~l~~~~~~~~i~~~~i~pg~~ 187 (246)
T PRK05653 133 YGRIVNISSVSGVTG-----------NPG-QTNYSAAK---AGVIGFTKALALELASRGITVNAVAPGFI 187 (246)
T ss_pred CcEEEEECcHHhccC-----------CCC-CcHhHhHH---HHHHHHHHHHHHHHhhcCeEEEEEEeCCc
Confidence 789999999654321 112 36799999 5667777777654 4788888888763
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.1e-06 Score=89.00 Aligned_cols=100 Identities=12% Similarity=-0.029 Sum_probs=74.3
Q ss_pred CCCEEEEcCcccCc------ccCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAV------GESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|++|||||.... ....++++..+++|+.++.++++++... .-.++|++||....-. . +
T Consensus 119 ~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~-----------~-p 186 (299)
T PRK06300 119 HIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRA-----------V-P 186 (299)
T ss_pred CCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcCc-----------C-C
Confidence 59999999986421 1123466779999999999999988653 2247899888543211 1 2
Q ss_pred CC-ChHHHHHHHHHHHHHHHHhhc--C-CceEEEEecccccCCC
Q psy16545 138 IK-NVYGKTKHFIEEMLKDLSKAH--K-EWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~-s~Y~~sK~~~e~~~~~~~~~~--~-~~~~~ilR~~~v~G~~ 177 (600)
.. ..|+.||.+.+.+++.++.+. . |++++.+.||.+-.+.
T Consensus 187 ~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~ 230 (299)
T PRK06300 187 GYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRA 230 (299)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChh
Confidence 22 379999999999999999875 2 8999999999887663
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.4e-06 Score=82.50 Aligned_cols=119 Identities=13% Similarity=0.070 Sum_probs=86.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc-----cccChHHHHHHHHHHHHHHHHHHHH----c
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKS----H 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~~~~----~ 316 (600)
+..+.++.+|+.+++++..+++.. ++|+|||+|+...... ..++....++.|+.++.++++.+.. .
T Consensus 52 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 131 (251)
T PRK07231 52 GGRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGE 131 (251)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 345889999999999998877643 6899999998743222 2244567789999988777776664 4
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+.++||++||...++.. +....|+.+| ...+.+++.+... .+++++.++|+.+
T Consensus 132 ~~~~iv~~sS~~~~~~~------------~~~~~y~~sk---~~~~~~~~~~a~~~~~~~i~v~~i~pg~~ 187 (251)
T PRK07231 132 GGGAIVNVASTAGLRPR------------PGLGWYNASK---GAVITLTKALAAELGPDKIRVNAVAPVVV 187 (251)
T ss_pred CCcEEEEEcChhhcCCC------------CCchHHHHHH---HHHHHHHHHHHHHhhhhCeEEEEEEECcc
Confidence 66899999998776531 1236799999 5667777777654 3777888877653
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=7.1e-06 Score=81.59 Aligned_cols=117 Identities=16% Similarity=0.049 Sum_probs=84.1
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCc-----cccccChHHHHHHHHHHHHHHHHHH----HHc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVM----KSH 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~----~~~ 316 (600)
+..+.++.+|+++.+++.++++. .++|++||+|+.... .....+....++.|+.++..+++.+ ++.
T Consensus 55 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 134 (260)
T PRK12823 55 GGEALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ 134 (260)
T ss_pred CCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 34577899999998887776664 258999999985321 1122344566788988877555544 455
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+..++|++||.+.|+. + ..+|+.+| ...+.+++.++... ++++..++|+.+
T Consensus 135 ~~g~iv~~sS~~~~~~-------------~-~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 188 (260)
T PRK12823 135 GGGAIVNVSSIATRGI-------------N-RVPYSAAK---GGVNALTASLAFEYAEHGIRVNAVAPGGT 188 (260)
T ss_pred CCCeEEEEcCccccCC-------------C-CCccHHHH---HHHHHHHHHHHHHhcccCcEEEEEecCcc
Confidence 6679999999887642 1 25799999 67888888887664 888899998763
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.7e-05 Score=83.07 Aligned_cols=114 Identities=16% Similarity=0.111 Sum_probs=80.1
Q ss_pred eeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHcCC----CE
Q psy16545 254 VDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHGV----YQ 320 (600)
Q Consensus 254 v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~~~----~r 320 (600)
..++.+|+++.+.+.++++.. ++|+|||+|+...... ..+.....++.|+.++.++.+++..... .+
T Consensus 258 ~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~ 337 (450)
T PRK08261 258 GTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGR 337 (450)
T ss_pred CeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCE
Confidence 467889999998888776642 5899999999753221 2344566788999999999999976432 68
Q ss_pred EEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeec
Q psy16545 321 LVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFY 382 (600)
Q Consensus 321 ~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~ 382 (600)
||++||.+.+... +....|+.+| ...+.+++.+..+ .++++..+.|+
T Consensus 338 iv~~SS~~~~~g~------------~~~~~Y~asK---aal~~~~~~la~el~~~gi~v~~v~PG 387 (450)
T PRK08261 338 IVGVSSISGIAGN------------RGQTNYAASK---AGVIGLVQALAPLLAERGITINAVAPG 387 (450)
T ss_pred EEEECChhhcCCC------------CCChHHHHHH---HHHHHHHHHHHHHHhhhCcEEEEEEeC
Confidence 9999997644211 1136799999 5566666666543 46666666654
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=7.8e-06 Score=81.23 Aligned_cols=116 Identities=10% Similarity=0.049 Sum_probs=83.8
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC-
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG- 317 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~- 317 (600)
..+.++.+|+++.+.+..++++ .++|++||+|+...... ...+....++.|+.++.++++++.. .+
T Consensus 53 ~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 132 (259)
T PRK12384 53 GMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI 132 (259)
T ss_pred ceeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC
Confidence 4588999999999888877664 26899999998754322 2234456679999998887777754 34
Q ss_pred CCEEEEecCcc-cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHH---HhCCCCeeEeecc
Q psy16545 318 VYQLVFSSSCT-VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER---VTGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~-vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~---~~~~~~~~~r~~~ 383 (600)
-.++|++||.+ .++. +....|+.+| ...+.+++.+.. .+++++..+||+.
T Consensus 133 ~~~iv~~ss~~~~~~~-------------~~~~~Y~~sK---aa~~~l~~~la~e~~~~gi~v~~v~pg~ 186 (259)
T PRK12384 133 QGRIIQINSKSGKVGS-------------KHNSGYSAAK---FGGVGLTQSLALDLAEYGITVHSLMLGN 186 (259)
T ss_pred CcEEEEecCcccccCC-------------CCCchhHHHH---HHHHHHHHHHHHHHHHcCcEEEEEecCC
Confidence 35999999954 3432 1136799999 666777777764 4689999999875
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=3e-06 Score=84.41 Aligned_cols=116 Identities=15% Similarity=0.110 Sum_probs=84.6
Q ss_pred ceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcc-----ccccChHHHHHHHHHHHHHHHHHHHH----cCC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVMKS----HGV 318 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~ 318 (600)
++.++.+|+.+++++.++++. .++|+|||+|+..... ...++....++.|+.++.++++++.. .+.
T Consensus 59 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 138 (264)
T PRK12829 59 KVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGH 138 (264)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 568899999999998887764 2689999999975221 12245577899999999999998743 344
Q ss_pred -CEEEEecCcccc-cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 319 -YQLVFSSSCTVY-GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 319 -~r~v~~SS~~vY-g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
++++++||...+ |. +....|+.+| ...|.+++.++.. .+++++.+||+.+
T Consensus 139 ~~~vv~~ss~~~~~~~-------------~~~~~y~~~K---~a~~~~~~~l~~~~~~~~i~~~~l~pg~v 193 (264)
T PRK12829 139 GGVIIALSSVAGRLGY-------------PGRTPYAASK---WAVVGLVKSLAIELGPLGIRVNAILPGIV 193 (264)
T ss_pred CeEEEEecccccccCC-------------CCCchhHHHH---HHHHHHHHHHHHHHhhcCeEEEEEecCCc
Confidence 578888875432 21 1125699999 6678888887754 4799999998873
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.7e-06 Score=108.49 Aligned_cols=120 Identities=18% Similarity=0.215 Sum_probs=94.7
Q ss_pred cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEe
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFS 115 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~ 115 (600)
.+|++|.+++.+++++ +....++|.|||+||..... ...+++...+++|+.|+.+|++++.....++||++
T Consensus 2100 ~~DVtD~~av~~av~~-----v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~~~~IV~~ 2174 (2582)
T TIGR02813 2100 SADVTNSVSVAATVQP-----LNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAENIKLLALF 2174 (2582)
T ss_pred EccCCCHHHHHHHHHH-----HHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 7899999998886655 33323699999999986432 23356677999999999999999988766789999
Q ss_pred cCccc-cCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCC
Q psy16545 116 SSCTV-YGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 116 SS~~v-yg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~ 177 (600)
||... +|. ...+.|+.+|...+.+.+.++.++++++++.+.+|.+-|+.
T Consensus 2175 SSvag~~G~-------------~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtgm 2224 (2582)
T TIGR02813 2175 SSAAGFYGN-------------TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGGM 2224 (2582)
T ss_pred echhhcCCC-------------CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCCc
Confidence 99743 443 34578999999999999998888778899999998876653
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=98.41 E-value=6.2e-06 Score=81.36 Aligned_cols=118 Identities=14% Similarity=0.156 Sum_probs=86.9
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+.+++++.+|+.+.+++.+.++. .++|++||+|+...... ........++.|+.++.++++++. +.+
T Consensus 51 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 130 (250)
T TIGR03206 51 GGNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG 130 (250)
T ss_pred CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 45688999999999988887763 25899999998643211 122335568999999999888775 445
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.+++|++||...|+... ....|+.+| ...+.+++.++.+ .+++++.++|+.
T Consensus 131 ~~~ii~iss~~~~~~~~------------~~~~Y~~sK---~a~~~~~~~la~~~~~~~i~v~~v~pg~ 184 (250)
T TIGR03206 131 AGRIVNIASDAARVGSS------------GEAVYAACK---GGLVAFSKTMAREHARHGITVNVVCPGP 184 (250)
T ss_pred CeEEEEECchhhccCCC------------CCchHHHHH---HHHHHHHHHHHHHHhHhCcEEEEEecCc
Confidence 67999999988775422 136799999 6677777777765 378888888765
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=5.1e-06 Score=81.24 Aligned_cols=119 Identities=14% Similarity=0.100 Sum_probs=85.5
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
...++++.+|+.+.+++.++++.. ++|+|||+++...... ..+.....+..|+.++.++++++. +.+
T Consensus 53 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 132 (239)
T PRK12828 53 ADALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG 132 (239)
T ss_pred hcCceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC
Confidence 345778889999999888877642 6899999998643211 122345668899999999988875 346
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.+++|++||...|+.. +....|+.+| ...+.+++.+... .++++..+||+.+
T Consensus 133 ~~~iv~~sS~~~~~~~------------~~~~~y~~sk---~a~~~~~~~~a~~~~~~~i~~~~i~pg~v 187 (239)
T PRK12828 133 GGRIVNIGAGAALKAG------------PGMGAYAAAK---AGVARLTEALAAELLDRGITVNAVLPSII 187 (239)
T ss_pred CCEEEEECchHhccCC------------CCcchhHHHH---HHHHHHHHHHHHHhhhcCeEEEEEecCcc
Confidence 7899999998877532 1236799999 5567777666543 4788888887643
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.4e-06 Score=86.02 Aligned_cols=119 Identities=17% Similarity=0.063 Sum_probs=83.6
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc--CCCEEEE
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVF 323 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~r~v~ 323 (600)
+..+.++.+|+++++++.++++. .++|+|||+|+... ....++...+++|+.++.++++++.+. ...++|+
T Consensus 55 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~--~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~ 132 (248)
T PRK07806 55 GGRASAVGADLTDEESVAALMDTAREEFGGLDALVLNASGGM--ESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVF 132 (248)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCC--CCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEE
Confidence 34578899999999998877764 25899999998642 223356677889999999999999875 2258999
Q ss_pred ecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEee
Q psy16545 324 SSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIF 381 (600)
Q Consensus 324 ~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~ 381 (600)
+||...... +..+.. +...+|+.+| ...|.+++.+... .+++++.++|
T Consensus 133 isS~~~~~~----~~~~~~---~~~~~Y~~sK---~a~e~~~~~l~~~~~~~~i~v~~v~p 183 (248)
T PRK07806 133 VTSHQAHFI----PTVKTM---PEYEPVARSK---RAGEDALRALRPELAEKGIGFVVVSG 183 (248)
T ss_pred EeCchhhcC----ccccCC---ccccHHHHHH---HHHHHHHHHHHHHhhccCeEEEEeCC
Confidence 999543211 111121 2236899999 7789999888764 3555555543
|
|
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.8e-06 Score=87.10 Aligned_cols=122 Identities=20% Similarity=0.153 Sum_probs=82.9
Q ss_pred ceeEEEeecCCh------hhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEec
Q psy16545 253 KVDFYSCDLVDK------NRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSS 325 (600)
Q Consensus 253 ~v~~i~~Dl~~~------~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~r~v~~S 325 (600)
++..+.||+.++ .++....+ ++++|||+||.....+ ........|..||.++++.|++. +.+-|||+|
T Consensus 80 Kv~pi~GDi~~~~LGis~~D~~~l~~--eV~ivih~AAtvrFde---~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVS 154 (467)
T KOG1221|consen 80 KVVPIAGDISEPDLGISESDLRTLAD--EVNIVIHSAATVRFDE---PLDVALGINTRGTRNVLQLAKEMVKLKALVHVS 154 (467)
T ss_pred cceeccccccCcccCCChHHHHHHHh--cCCEEEEeeeeeccch---hhhhhhhhhhHhHHHHHHHHHHhhhhheEEEee
Confidence 345566666543 33444444 7899999999865543 23456789999999999999998 568999999
Q ss_pred CcccccCC---CCC--C------------CCCCC---------C--CCCCCcccccchhhHHHHHHHHHHHHHHhCCCCe
Q psy16545 326 SCTVYGEP---QFL--P------------ITEDH---------P--TGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPV 377 (600)
Q Consensus 326 S~~vYg~~---~~~--~------------~~E~~---------~--~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~ 377 (600)
|..+.-.. ... + .+|+. + .....+.|..+| ..+|.++..++ .+++.+
T Consensus 155 TAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTK---al~E~~i~~~~--~~lPiv 229 (467)
T KOG1221|consen 155 TAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTK---ALAEMVIQKEA--ENLPLV 229 (467)
T ss_pred hhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehH---hhHHHHHHhhc--cCCCeE
Confidence 96554110 110 1 11111 1 112348899999 78999999874 589999
Q ss_pred eEeeccc
Q psy16545 378 PYIFYNL 384 (600)
Q Consensus 378 ~~r~~~~ 384 (600)
++||+.+
T Consensus 230 IiRPsiI 236 (467)
T KOG1221|consen 230 IIRPSII 236 (467)
T ss_pred EEcCCce
Confidence 9999864
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.9e-06 Score=82.07 Aligned_cols=119 Identities=12% Similarity=0.083 Sum_probs=86.8
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc-----cccChHHHHHHHHHHHHHHHHHHHHcC---
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSHG--- 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~~~~~~--- 317 (600)
+..+.++.+|+++..++.++++.. ++|+|||+|+...... ..++....++.|+.++.++++++.+.-
T Consensus 51 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 130 (248)
T PRK06123 51 GGEALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTR 130 (248)
T ss_pred CCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 345788999999999888877642 5799999998753322 223445779999999999988876531
Q ss_pred ----CCEEEEecCcc-cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 318 ----VYQLVFSSSCT-VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 318 ----~~r~v~~SS~~-vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
-.++|++||.+ +|+... . ...|+.+| ...|.+++.++.+. +++++.+||+.+
T Consensus 131 ~~~~~g~iv~~sS~~~~~~~~~-----------~-~~~Y~~sK---aa~~~~~~~la~~~~~~~i~v~~i~pg~v 190 (248)
T PRK06123 131 HGGRGGAIVNVSSMAARLGSPG-----------E-YIDYAASK---GAIDTMTIGLAKEVAAEGIRVNAVRPGVI 190 (248)
T ss_pred CCCCCeEEEEECchhhcCCCCC-----------C-ccchHHHH---HHHHHHHHHHHHHhcccCeEEEEEecCcc
Confidence 13699999965 454311 0 13599999 67888888887654 899999998764
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=8.2e-06 Score=82.64 Aligned_cols=118 Identities=14% Similarity=0.125 Sum_probs=88.2
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc-----cccChHHHHHHHHHHHHHHHHHHHHc--CC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSH--GV 318 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~ 318 (600)
+.++.++.+|+.+.+.+.++++. .++|+|||+|+...... ..++....++.|+.++.++++++... ..
T Consensus 95 ~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~ 174 (290)
T PRK06701 95 GVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG 174 (290)
T ss_pred CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC
Confidence 45678999999999988887764 26899999998743222 22344678999999999999998763 23
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
.++|++||.+.|.... ....|+.+| ...+.+++.++... +++++.++|+.
T Consensus 175 g~iV~isS~~~~~~~~------------~~~~Y~~sK---~a~~~l~~~la~~~~~~gIrv~~i~pG~ 227 (290)
T PRK06701 175 SAIINTGSITGYEGNE------------TLIDYSATK---GAIHAFTRSLAQSLVQKGIRVNAVAPGP 227 (290)
T ss_pred CeEEEEecccccCCCC------------CcchhHHHH---HHHHHHHHHHHHHhhhcCeEEEEEecCC
Confidence 5899999988775322 125699999 66788888888764 78888888654
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=98.36 E-value=2e-06 Score=80.62 Aligned_cols=108 Identities=28% Similarity=0.283 Sum_probs=82.3
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
..+++++.+|+.+++.+.+++. ++|+|||+++.... ....+.+++++|++++++|+|++||..+|
T Consensus 38 ~~~~~~~~~d~~d~~~~~~al~--~~d~vi~~~~~~~~-------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~ 102 (183)
T PF13460_consen 38 SPGVEIIQGDLFDPDSVKAALK--GADAVIHAAGPPPK-------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVY 102 (183)
T ss_dssp CTTEEEEESCTTCHHHHHHHHT--TSSEEEECCHSTTT-------------HHHHHHHHHHHHHHTTSSEEEEEEETTGT
T ss_pred ccccccceeeehhhhhhhhhhh--hcchhhhhhhhhcc-------------cccccccccccccccccccceeeeccccC
Confidence 6789999999999999999998 89999999865321 17778999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN 383 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~ 383 (600)
+........+..+ ....|...| ..+|+.++ ..+++++++||+.
T Consensus 103 ~~~~~~~~~~~~~---~~~~~~~~~---~~~e~~~~----~~~~~~~ivrp~~ 145 (183)
T PF13460_consen 103 RDPPGLFSDEDKP---IFPEYARDK---REAEEALR----ESGLNWTIVRPGW 145 (183)
T ss_dssp TTCTSEEEGGTCG---GGHHHHHHH---HHHHHHHH----HSTSEEEEEEESE
T ss_pred CCCCccccccccc---chhhhHHHH---HHHHHHHH----hcCCCEEEEECcE
Confidence 8544322122211 114566666 45565553 4599999999987
|
... |
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.36 E-value=4e-06 Score=86.32 Aligned_cols=129 Identities=16% Similarity=0.084 Sum_probs=88.0
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCc-----cccccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
..+.++.+|+.+.+++.++++. .++|++||+|+.... ..+.++....+++|+.++.++++++... +
T Consensus 55 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 134 (322)
T PRK07453 55 DSYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSP 134 (322)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC
Confidence 4578899999999998887764 248999999996432 1233456778999999999998877642 2
Q ss_pred --CCEEEEecCcccccCC----CCCCC--C------------------CCCCCCCCCcccccchhhHHHHHHHHHHHHHH
Q psy16545 318 --VYQLVFSSSCTVYGEP----QFLPI--T------------------EDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV 371 (600)
Q Consensus 318 --~~r~v~~SS~~vYg~~----~~~~~--~------------------E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~ 371 (600)
..|+|++||...+... ...+. + +..+..|. ..|+.|| ...+.+++.++++
T Consensus 135 ~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~SK---~a~~~~~~~la~~ 210 (322)
T PRK07453 135 APDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPG-KAYKDSK---LCNMLTMRELHRR 210 (322)
T ss_pred CCCceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccCccCCCcc-chhhHhH---HHHHHHHHHHHHh
Confidence 3599999997765311 00000 0 11223333 7899999 5566666666554
Q ss_pred ----hCCCCeeEeeccc
Q psy16545 372 ----TGNKPVPYIFYNL 384 (600)
Q Consensus 372 ----~~~~~~~~r~~~~ 384 (600)
.+++++.+||+.+
T Consensus 211 ~~~~~gi~v~~v~PG~v 227 (322)
T PRK07453 211 YHESTGITFSSLYPGCV 227 (322)
T ss_pred hcccCCeEEEEecCCcc
Confidence 3788889998764
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.1e-05 Score=79.03 Aligned_cols=116 Identities=14% Similarity=0.128 Sum_probs=85.0
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHH----cCC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HGV 318 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~ 318 (600)
..+.++.+|+++..++.+++.. .++|+|||+|+..... .....+...++.|+.++.++++++.. .+.
T Consensus 48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 127 (239)
T TIGR01830 48 VKALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRS 127 (239)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 3578999999999988887764 2579999999975321 22345677889999999999998875 345
Q ss_pred CEEEEecCc-ccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 319 YQLVFSSSC-TVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 319 ~r~v~~SS~-~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
++||++||. ++||.. ....|+.+| ...+.+++.+.+. .+++++.++|+.
T Consensus 128 ~~~v~~sS~~~~~g~~-------------~~~~y~~~k---~a~~~~~~~l~~~~~~~g~~~~~i~pg~ 180 (239)
T TIGR01830 128 GRIINISSVVGLMGNA-------------GQANYAASK---AGVIGFTKSLAKELASRNITVNAVAPGF 180 (239)
T ss_pred eEEEEECCccccCCCC-------------CCchhHHHH---HHHHHHHHHHHHHHhhcCeEEEEEEECC
Confidence 699999996 455531 136799999 6667777776654 467777777643
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=5.2e-06 Score=81.77 Aligned_cols=119 Identities=14% Similarity=0.028 Sum_probs=89.5
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCc----cccccChHHHHHHHHHHHHHHHHHHH-----Hc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAV----GESMQEPLMYYKNNLIATINLLEVMK-----SH 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~-----~~ 316 (600)
+..++++.+|+.+.+.+.+.++. .++|.|||+|+.... ....++....++.|+.++.++++++. +.
T Consensus 58 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 137 (249)
T PRK12827 58 GGKALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR 137 (249)
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC
Confidence 34688999999999988887653 368999999987542 12234456778999999999999998 45
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+.+++|++||...+... +....|+.+| ...+.+++.++.. .+++++.+||+.+
T Consensus 138 ~~~~iv~~sS~~~~~~~------------~~~~~y~~sK---~a~~~~~~~l~~~~~~~~i~~~~i~pg~v 193 (249)
T PRK12827 138 RGGRIVNIASVAGVRGN------------RGQVNYAASK---AGLIGLTKTLANELAPRGITVNAVAPGAI 193 (249)
T ss_pred CCeEEEEECCchhcCCC------------CCCchhHHHH---HHHHHHHHHHHHHhhhhCcEEEEEEECCc
Confidence 56799999997765421 1136799999 5567777777654 4899999998764
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.31 E-value=6.2e-06 Score=81.50 Aligned_cols=119 Identities=13% Similarity=0.026 Sum_probs=86.6
Q ss_pred cccccC-hHHhhhHHhhhhcccccccC-CCCEEEEcCcccCc-----ccCCCChhhhHHhHHHHHHHHHHHHHHcC-CCe
Q psy16545 40 EGDIVS-MYANTDLAQKELGWSARCTH-DIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMKSHG-VYQ 111 (600)
Q Consensus 40 ~~Dl~~-~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~r 111 (600)
.+|+++ .+++..++++ +.... ++|++|||||.... ....++.+..+++|+.++..+.+++...- .++
T Consensus 63 ~~Dvs~~~~~v~~~~~~-----~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 137 (251)
T COG1028 63 AADVSDDEESVEALVAA-----AEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQR 137 (251)
T ss_pred EecCCCCHHHHHHHHHH-----HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCe
Confidence 479997 8888776665 44332 49999999998642 11225667799999999999988543321 128
Q ss_pred EEEecCccccCCCCCCCCCCCCCCCCC-CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 112 LVFSSSCTVYGEPQFLPITEDHPTGNI-KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 112 ~I~~SS~~vyg~~~~~~~~E~~~~~~p-~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+|++||.... .. .+ ...|+.||.+.+.+.+.++.+. .|+.++.+.||.+-.+
T Consensus 138 Iv~isS~~~~-~~------------~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~ 192 (251)
T COG1028 138 IVNISSVAGL-GG------------PPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP 192 (251)
T ss_pred EEEECCchhc-CC------------CCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence 9999997544 21 23 4899999999999999998663 3899999999955533
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.30 E-value=5e-06 Score=83.38 Aligned_cols=118 Identities=15% Similarity=0.104 Sum_probs=84.6
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHH----HHHHHHHHHcCC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIAT----INLLEVMKSHGV 318 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt----~~ll~~~~~~~~ 318 (600)
.+++++.+|+++.+++.++++.. ++|++||+|+...... ..++....+++|+.++ ..++..+++.+.
T Consensus 46 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~ 125 (273)
T PRK06182 46 LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRS 125 (273)
T ss_pred CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCC
Confidence 45889999999999988877642 6899999998754322 3345677889999885 555556666677
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHH---HhCCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER---VTGNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~---~~~~~~~~~r~~~~ 384 (600)
+++|++||...+.. .|....|+.+| ...+.+.+.++. .++++++.++|+.+
T Consensus 126 g~iv~isS~~~~~~------------~~~~~~Y~~sK---aa~~~~~~~l~~e~~~~gi~v~~v~Pg~v 179 (273)
T PRK06182 126 GRIINISSMGGKIY------------TPLGAWYHATK---FALEGFSDALRLEVAPFGIDVVVIEPGGI 179 (273)
T ss_pred CEEEEEcchhhcCC------------CCCccHhHHHH---HHHHHHHHHHHHHhcccCCEEEEEecCCc
Confidence 89999999653211 12235799999 556777666553 46899999998764
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=4.9e-06 Score=83.70 Aligned_cols=118 Identities=15% Similarity=0.173 Sum_probs=85.8
Q ss_pred CceeEEEeecCChhhHHHHhhcC------CccEEEEcccccCcccc----ccChHHHHHHHHHH----HHHHHHHHHHcC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH------DIDCVIHFAAVKAVGES----MQEPLMYYKNNLIA----TINLLEVMKSHG 317 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~------~~d~VihlAa~~~~~~~----~~~~~~~~~~Nv~g----t~~ll~~~~~~~ 317 (600)
.+++++.+|+++.+++.++++.. ++|++||+|+....... .++....+++|+.| +..+++.+++.+
T Consensus 47 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~ 126 (277)
T PRK05993 47 EGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG 126 (277)
T ss_pred CCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC
Confidence 46788999999998887776642 58999999987543322 22345678899998 666777777777
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHH---HHhCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFE---RVTGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~---~~~~~~~~~~r~~~~ 384 (600)
.+++|++||...+.. .+....|+.|| ...|.+++.++ ..+|++++.++|+.+
T Consensus 127 ~g~iv~isS~~~~~~------------~~~~~~Y~asK---~a~~~~~~~l~~el~~~gi~v~~v~Pg~v 181 (277)
T PRK05993 127 QGRIVQCSSILGLVP------------MKYRGAYNASK---FAIEGLSLTLRMELQGSGIHVSLIEPGPI 181 (277)
T ss_pred CCEEEEECChhhcCC------------CCccchHHHHH---HHHHHHHHHHHHHhhhhCCEEEEEecCCc
Confidence 789999999654321 12236899999 66777777766 346899999987654
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.30 E-value=7.6e-06 Score=74.93 Aligned_cols=147 Identities=18% Similarity=0.162 Sum_probs=103.3
Q ss_pred cCCCCcchHHHHHHH-hhhcc-------------------CCCccEEecccccccccChHHhhhHHhhhhcccccccC-C
Q psy16545 8 LGTGQGTSVLQLLRT-FERVT-------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTH-D 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~-~~~~~-------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~-~ 66 (600)
.|||++..+|..|++ +.++. .+.+... .||+.|.++.++++++ +..+. .
T Consensus 9 LITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~-----v~Dv~d~~~~~~lvew-----Lkk~~P~ 78 (245)
T COG3967 9 LITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTE-----VCDVADRDSRRELVEW-----LKKEYPN 78 (245)
T ss_pred EEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchhee-----eecccchhhHHHHHHH-----HHhhCCc
Confidence 367777779988854 22221 2344555 7999999998887776 55443 5
Q ss_pred CCEEEEcCcccCcc------cCCCChhhhHHhHHHHHHHHHHHHHHc----CCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVG------ESMQEPLMYYKNNLIATINLLEVMKSH----GVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 67 ~d~Vih~A~~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++++|||||+.... ...++..+-.++|+.++..|..++..+ .-..+|.+||.-.+- |.
T Consensus 79 lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafv-----------Pm- 146 (245)
T COG3967 79 LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV-----------PM- 146 (245)
T ss_pred hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccC-----------cc-
Confidence 89999999997431 122334567889999999999887543 234689999964332 22
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.....|..+|++.-.+..++..+. .+++++=+-|+.|--+
T Consensus 147 ~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 147 ASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred cccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 344579999999988887776543 2788888888888775
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.8e-06 Score=84.98 Aligned_cols=122 Identities=18% Similarity=0.149 Sum_probs=88.8
Q ss_pred eEEEeecCChhhHHHHhhcC--CccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEecCcccc
Q psy16545 255 DFYSCDLVDKNRLGEIFAKH--DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVY 330 (600)
Q Consensus 255 ~~i~~Dl~~~~~l~~~l~~~--~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~r~v~~SS~~vY 330 (600)
+++.+|+++.+++.++++.. ++|++||+|+... .......+++|+.++..+++++... .-.++|++||.+.|
T Consensus 26 ~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~ 101 (241)
T PRK12428 26 GFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGA 101 (241)
T ss_pred HhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhh
Confidence 46789999999999888753 6899999998752 2456788999999999999998764 23699999999988
Q ss_pred cCCCCCCCCCC----------------CCCCCCCcccccchhhHHHHHHHHHHHH-H---HhCCCCeeEeeccc
Q psy16545 331 GEPQFLPITED----------------HPTGNIKNFYNLGTGQGTSVLQLLRTFE-R---VTGNKPVPYIFYNL 384 (600)
Q Consensus 331 g~~~~~~~~E~----------------~~~~~~~~~Y~~sK~~~~~~E~~~~~~~-~---~~~~~~~~~r~~~~ 384 (600)
+.....+..|. .| .+....|+.|| ...+.+.+.++ . .+|+++..++|+.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~sK---~a~~~~~~~la~~e~~~~girvn~v~PG~v 171 (241)
T PRK12428 102 EWPQRLELHKALAATASFDEGAAWLAAHP-VALATGYQLSK---EALILWTMRQAQPWFGARGIRVNCVAPGPV 171 (241)
T ss_pred ccccchHHHHhhhccchHHHHHHhhhccC-CCcccHHHHHH---HHHHHHHHHHHHHhhhccCeEEEEeecCCc
Confidence 64332222211 12 23347899999 66777777776 3 35788888887653
|
|
| >KOG1209|consensus | Back alignment and domain information |
|---|
Probab=98.28 E-value=2e-06 Score=78.87 Aligned_cols=147 Identities=13% Similarity=0.084 Sum_probs=103.2
Q ss_pred CCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHHhhhHHhhhhcccccc--cCCCCEEEE
Q psy16545 11 GQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYANTDLAQKELGWSARC--THDIDCVIH 72 (600)
Q Consensus 11 G~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~~~~~~~~~~~~~~~~--~~~~d~Vih 72 (600)
++.|.+|.++++ ++...++.+++..|+ +.|+++++++....+. +.. ...+|.++|
T Consensus 15 cs~GGIG~ala~--ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~e-----vr~~~~Gkld~L~N 87 (289)
T KOG1209|consen 15 CSSGGIGYALAK--EFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGE-----VRANPDGKLDLLYN 87 (289)
T ss_pred cCCcchhHHHHH--HHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHH-----HhhCCCCceEEEEc
Confidence 355668888844 444445555544444 6899999988773322 111 125899999
Q ss_pred cCcccCc----ccCCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHH
Q psy16545 73 FAAVKAV----GESMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKT 145 (600)
Q Consensus 73 ~A~~~~~----~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~s 145 (600)
+||..-. +....+.+++|++|+.|..++.++..+. .-..+|+++|...|- |. +..+.|.+|
T Consensus 88 NAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~v-----------pf-pf~~iYsAs 155 (289)
T KOG1209|consen 88 NAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVV-----------PF-PFGSIYSAS 155 (289)
T ss_pred CCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEe-----------cc-chhhhhhHH
Confidence 9998522 2223456679999999999999998754 225799999987764 22 455889999
Q ss_pred HHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 146 KHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 146 K~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
|++.-.+.+.++.+. .|++++.+-+|.|-..
T Consensus 156 KAAihay~~tLrlEl~PFgv~Vin~itGGv~T~ 188 (289)
T KOG1209|consen 156 KAAIHAYARTLRLELKPFGVRVINAITGGVATD 188 (289)
T ss_pred HHHHHHhhhhcEEeeeccccEEEEecccceecc
Confidence 999999998887664 3788888777777655
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.4e-05 Score=77.51 Aligned_cols=112 Identities=17% Similarity=0.195 Sum_probs=75.7
Q ss_pred ceeEEEeecCChhhHHHHhhcC-CccEEEEcccccCccc----cccChHHHHHHHHHHHH----HHHHHHHHcCCCEEEE
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATI----NLLEVMKSHGVYQLVF 323 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~----~ll~~~~~~~~~r~v~ 323 (600)
.++++.+|+.+.+.+.+++... ++|+|||+++...... ..++....++.|+.+.. ++++.+++. .+++|+
T Consensus 48 ~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~ 126 (227)
T PRK08219 48 GATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVF 126 (227)
T ss_pred cceEEecCCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEE
Confidence 5788999999999999888754 5899999998754321 11233455788888854 444444444 469999
Q ss_pred ecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh-C-CCCeeEe
Q psy16545 324 SSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT-G-NKPVPYI 380 (600)
Q Consensus 324 ~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~-~-~~~~~~r 380 (600)
+||...++... ....|+.+| ...+.+++.+.... + +++..++
T Consensus 127 ~ss~~~~~~~~------------~~~~y~~~K---~a~~~~~~~~~~~~~~~i~~~~i~ 170 (227)
T PRK08219 127 INSGAGLRANP------------GWGSYAASK---FALRALADALREEEPGNVRVTSVH 170 (227)
T ss_pred EcchHhcCcCC------------CCchHHHHH---HHHHHHHHHHHHHhcCCceEEEEe
Confidence 99987764321 136799999 66777877776543 2 4444444
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.7e-05 Score=77.93 Aligned_cols=119 Identities=16% Similarity=0.114 Sum_probs=84.6
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCc----cccccChHHHHHHHHHHHHHHHH----HHHHcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAV----GESMQEPLMYYKNNLIATINLLE----VMKSHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~----~~~~~~~~~~~~~Nv~gt~~ll~----~~~~~~ 317 (600)
+..+.++.+|+.+.+++.++++. .++|++||+|+.... ....++....++.|+.++.++.. .+++.+
T Consensus 51 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 130 (245)
T PRK12824 51 EDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG 130 (245)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC
Confidence 34688999999999988887664 258999999987532 12234556778899999888755 445556
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHH---HhCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER---VTGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~---~~~~~~~~~r~~~~ 384 (600)
..+||++||...+... +....|+.+| ...+.+++.++. ..+++++.++|+.+
T Consensus 131 ~~~iv~iss~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~l~~~~~~~~i~v~~v~pg~~ 185 (245)
T PRK12824 131 YGRIINISSVNGLKGQ------------FGQTNYSAAK---AGMIGFTKALASEGARYGITVNCIAPGYI 185 (245)
T ss_pred CeEEEEECChhhccCC------------CCChHHHHHH---HHHHHHHHHHHHHHHHhCeEEEEEEEccc
Confidence 6799999997766421 1135799999 556777777664 34677777777653
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.7e-05 Score=77.16 Aligned_cols=117 Identities=14% Similarity=0.064 Sum_probs=87.0
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSS 325 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~S 325 (600)
+.+++++.+|+++.+++.++++.. ++|.+||.++...... ..++....++.|+.++.+++++....+.+++|++|
T Consensus 44 ~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~s 123 (230)
T PRK07041 44 GAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVS 123 (230)
T ss_pred CCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEEC
Confidence 456889999999999999988764 3799999998754321 23456778899999999999966655668999999
Q ss_pred CcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh-CCCCeeEeec
Q psy16545 326 SCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT-GNKPVPYIFY 382 (600)
Q Consensus 326 S~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~-~~~~~~~r~~ 382 (600)
|...|... +..+.|+.+| ...+.+.+.++.+. +++++.++|+
T Consensus 124 s~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~irv~~i~pg 166 (230)
T PRK07041 124 GFAAVRPS------------ASGVLQGAIN---AALEALARGLALELAPVRVNTVSPG 166 (230)
T ss_pred chhhcCCC------------CcchHHHHHH---HHHHHHHHHHHHHhhCceEEEEeec
Confidence 98877431 2236899999 66788888887654 3455555443
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.8e-05 Score=77.19 Aligned_cols=117 Identities=15% Similarity=0.053 Sum_probs=83.6
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
+..+.++.+|+++.+.+.++++. .++|+|||+|+..... ....+....++.|+.++.++++++... +
T Consensus 58 ~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 137 (258)
T PRK09134 58 GRRAVALQADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA 137 (258)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 45688899999999988887764 2589999999864321 123455678899999999999988764 2
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhC--CCCeeEeec
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTG--NKPVPYIFY 382 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~--~~~~~~r~~ 382 (600)
-+++|++||...+.. .|....|+.+| ...|.+.+.+++..+ ++++.++|+
T Consensus 138 ~~~iv~~~s~~~~~~------------~p~~~~Y~~sK---~a~~~~~~~la~~~~~~i~v~~i~PG 189 (258)
T PRK09134 138 RGLVVNMIDQRVWNL------------NPDFLSYTLSK---AALWTATRTLAQALAPRIRVNAIGPG 189 (258)
T ss_pred CceEEEECchhhcCC------------CCCchHHHHHH---HHHHHHHHHHHHHhcCCcEEEEeecc
Confidence 358888888655432 12235799999 668888888877543 555555543
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=7.5e-06 Score=80.88 Aligned_cols=118 Identities=12% Similarity=0.049 Sum_probs=87.1
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHH----HHcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~----~~~~ 317 (600)
+..+.++.+|+.|++++.++++.. ++|+|||+++...... ..++....+..|+.++.++.+.+ ++.+
T Consensus 52 ~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 131 (252)
T PRK06138 52 GGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG 131 (252)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC
Confidence 445789999999999988877642 6899999999754322 22344556889999987766655 4556
Q ss_pred CCEEEEecCccc-ccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTV-YGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~v-Yg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
.+++|++||... +|. +....|+.+| ...+.+++.+..+. +++++.+||+.+
T Consensus 132 ~~~ii~~sS~~~~~~~-------------~~~~~Y~~sK---~a~~~~~~~l~~~~~~~~i~v~~v~pg~~ 186 (252)
T PRK06138 132 GGSIVNTASQLALAGG-------------RGRAAYVASK---GAIASLTRAMALDHATDGIRVNAVAPGTI 186 (252)
T ss_pred CeEEEEECChhhccCC-------------CCccHHHHHH---HHHHHHHHHHHHHHHhcCeEEEEEEECCc
Confidence 789999999754 432 1136799999 66788888887654 889999998764
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.2e-05 Score=82.01 Aligned_cols=124 Identities=16% Similarity=0.099 Sum_probs=83.8
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc--cccChHHHHHHHHHH----HHHHHHHHHHcCCCE
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE--SMQEPLMYYKNNLIA----TINLLEVMKSHGVYQ 320 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~--~~~~~~~~~~~Nv~g----t~~ll~~~~~~~~~r 320 (600)
..+.++.+|+.+.+++.++++.. ++|++||+|+...... ..++....+++|+.+ +..+++.+++.+.++
T Consensus 67 ~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~ 146 (306)
T PRK06197 67 ADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSR 146 (306)
T ss_pred CceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCE
Confidence 46789999999999888876642 5899999999754332 234556778999999 666777776666679
Q ss_pred EEEecCcccc--cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeE
Q psy16545 321 LVFSSSCTVY--GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPY 379 (600)
Q Consensus 321 ~v~~SS~~vY--g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~ 379 (600)
+|++||...+ +........++.+..+ ...|+.|| ...+.+.+.++.+. ++++..+
T Consensus 147 iV~vSS~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~SK---~a~~~~~~~la~~l~~~~i~v~~v 206 (306)
T PRK06197 147 VVTVSSGGHRIRAAIHFDDLQWERRYNR-VAAYGQSK---LANLLFTYELQRRLAAAGATTIAV 206 (306)
T ss_pred EEEECCHHHhccCCCCccccCcccCCCc-HHHHHHHH---HHHHHHHHHHHHHhhcCCCCeEEE
Confidence 9999997644 3222212222223223 36899999 66777887777653 5554433
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.3e-05 Score=76.98 Aligned_cols=117 Identities=11% Similarity=-0.014 Sum_probs=86.2
Q ss_pred ceeEEEeecCChhhHHHHhhcC-CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C-CCEEE
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G-VYQLV 322 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----~-~~r~v 322 (600)
+..++.+|+.+...+.++++.. ++|+|||+|+...... ...+....+..|+.++.++++++.+. + .++||
T Consensus 54 ~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv 133 (245)
T PRK07060 54 GCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIV 133 (245)
T ss_pred CCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEE
Confidence 3567889999999888887753 4899999998754322 22345566789999999999988753 2 36999
Q ss_pred EecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 323 FSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 323 ~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
++||...|.... ....|+.+| ...|.+++.++.. .+++++.+||+.+
T Consensus 134 ~~sS~~~~~~~~------------~~~~y~~sK---~a~~~~~~~~a~~~~~~~i~v~~v~pg~v 183 (245)
T PRK07060 134 NVSSQAALVGLP------------DHLAYCASK---AALDAITRVLCVELGPHGIRVNSVNPTVT 183 (245)
T ss_pred EEccHHHcCCCC------------CCcHhHHHH---HHHHHHHHHHHHHHhhhCeEEEEEeeCCC
Confidence 999987654211 136799999 6688888888764 4788888887653
|
|
| >PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.7e-07 Score=69.07 Aligned_cols=46 Identities=37% Similarity=0.672 Sum_probs=28.3
Q ss_pred HHhhhcCCcccccccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 549 TFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 549 ~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
++++++|.++++.+.+.|++++..+++|++|++++|||+|+++|+.
T Consensus 1 A~e~vtG~~i~~~~~~rR~GD~~~~~Ad~~kA~~~LgW~p~~~L~~ 46 (62)
T PF13950_consen 1 AFEKVTGKKIPVEYAPRRPGDPAHLVADISKAREELGWKPKYSLED 46 (62)
T ss_dssp HHHHHHTS---EEEE---TT--SEE-B--HHHHHHC----SSSHHH
T ss_pred CcHHHHCCCCCceECCCCCCchhhhhCCHHHHHHHhCCCcCCCHHH
Confidence 4788999999999999999999999999999999999999998864
|
... |
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.9e-05 Score=75.36 Aligned_cols=117 Identities=15% Similarity=0.138 Sum_probs=83.5
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
+..+.++.+|+.+.+++.++++. .++|+|||+|+...... ..+.+...+..|+.++.++++++... +
T Consensus 54 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 133 (248)
T PRK05557 54 GGKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR 133 (248)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 45678899999999988887764 26899999998754321 22344567889999999999888753 4
Q ss_pred CCEEEEecCc-ccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 318 VYQLVFSSSC-TVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~-~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.++||++||. ++||.. ....|+.+| ...+.+++.+++. .+++++.++|+.
T Consensus 134 ~~~~v~iss~~~~~~~~-------------~~~~y~~sk---~a~~~~~~~~a~~~~~~~i~~~~v~pg~ 187 (248)
T PRK05557 134 SGRIINISSVVGLMGNP-------------GQANYAASK---AGVIGFTKSLARELASRGITVNAVAPGF 187 (248)
T ss_pred CeEEEEEcccccCcCCC-------------CCchhHHHH---HHHHHHHHHHHHHhhhhCeEEEEEecCc
Confidence 5689999995 445431 136799999 6677777776653 366777776543
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.1e-05 Score=79.56 Aligned_cols=119 Identities=15% Similarity=0.044 Sum_probs=86.8
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccccc----cChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
+..+.++.+|+++++++.++++.. ++|+|||+|+.......+ ......++.|+.++.++++++... +
T Consensus 53 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 132 (250)
T PRK08063 53 GRKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG 132 (250)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 456788999999999988877753 589999999865432222 222345789999999998888753 4
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.++||++||...+.. . +....|+.+| ...|.+++.+... .+++++.++|+.+
T Consensus 133 ~g~iv~~sS~~~~~~-----------~-~~~~~y~~sK---~a~~~~~~~~~~~~~~~~i~v~~i~pg~v 187 (250)
T PRK08063 133 GGKIISLSSLGSIRY-----------L-ENYTTVGVSK---AALEALTRYLAVELAPKGIAVNAVSGGAV 187 (250)
T ss_pred CeEEEEEcchhhccC-----------C-CCccHHHHHH---HHHHHHHHHHHHHHhHhCeEEEeEecCcc
Confidence 569999999765421 1 1136899999 6788888887754 5788888887654
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.6e-05 Score=77.00 Aligned_cols=118 Identities=15% Similarity=0.119 Sum_probs=83.8
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc-------------cccccChHHHHHHHHHHHHHHHHH
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV-------------GESMQEPLMYYKNNLIATINLLEV 312 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~-------------~~~~~~~~~~~~~Nv~gt~~ll~~ 312 (600)
+..+.++.+|+++.+++.++++.. ++|+|||+|+.... .....+....++.|+.++..++..
T Consensus 53 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 132 (253)
T PRK08217 53 GTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGRE 132 (253)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHH
Confidence 456788999999998887766642 57999999986431 112234456778999999877765
Q ss_pred HHH----c-CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 313 MKS----H-GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 313 ~~~----~-~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+.. . .-.++|++||...||.. ....|+.+| ...+.+++.++.. ++++++.++|+.+
T Consensus 133 ~~~~l~~~~~~~~iv~~ss~~~~~~~-------------~~~~Y~~sK---~a~~~l~~~la~~~~~~~i~v~~v~pg~v 196 (253)
T PRK08217 133 AAAKMIESGSKGVIINISSIARAGNM-------------GQTNYSASK---AGVAAMTVTWAKELARYGIRVAAIAPGVI 196 (253)
T ss_pred HHHHHHhcCCCeEEEEEccccccCCC-------------CCchhHHHH---HHHHHHHHHHHHHHHHcCcEEEEEeeCCC
Confidence 543 2 22479999998877532 136799999 6678888887754 5788888887653
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.7e-05 Score=85.68 Aligned_cols=114 Identities=14% Similarity=0.078 Sum_probs=82.4
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 332 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~ 332 (600)
+++++.+|+.+.+++.+.+. ++|+|||+++... ....+....+.+|+.++.+++++|++.+++|||++||..++..
T Consensus 139 ~v~iV~gDLtD~esI~~aLg--giDiVVn~AG~~~--~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~ 214 (576)
T PLN03209 139 KLEIVECDLEKPDQIGPALG--NASVVICCIGASE--KEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKV 214 (576)
T ss_pred ceEEEEecCCCHHHHHHHhc--CCCEEEEcccccc--ccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhccc
Confidence 57899999999999988887 7899999988642 1223455678899999999999999999999999999876421
Q ss_pred CCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc
Q psy16545 333 PQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN 383 (600)
Q Consensus 333 ~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~ 383 (600)
.. .+. .... ...|...| ..+|..+. ..|++++++||+.
T Consensus 215 g~----p~~-~~~s-k~~~~~~K---raaE~~L~----~sGIrvTIVRPG~ 252 (576)
T PLN03209 215 GF----PAA-ILNL-FWGVLCWK---RKAEEALI----ASGLPYTIVRPGG 252 (576)
T ss_pred Cc----ccc-chhh-HHHHHHHH---HHHHHHHH----HcCCCEEEEECCe
Confidence 10 010 1111 12344445 45565554 4699999999876
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.6e-05 Score=78.83 Aligned_cols=118 Identities=15% Similarity=0.055 Sum_probs=85.5
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc------ccccChHHHHHHHHHHHHHHHHHHHHc---
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG------ESMQEPLMYYKNNLIATINLLEVMKSH--- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~------~~~~~~~~~~~~Nv~gt~~ll~~~~~~--- 316 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+..... ...+++...++.|+.++.++++++...
T Consensus 55 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 134 (255)
T PRK05717 55 GENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRA 134 (255)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 456789999999998876655432 589999999975322 123345678999999999999999742
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhC--CCCeeEeecc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTG--NKPVPYIFYN 383 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~--~~~~~~r~~~ 383 (600)
...++|++||...+... +..+.|+.+| ...+.+++.+....+ +++..++|+.
T Consensus 135 ~~g~ii~~sS~~~~~~~------------~~~~~Y~~sK---aa~~~~~~~la~~~~~~i~v~~i~Pg~ 188 (255)
T PRK05717 135 HNGAIVNLASTRARQSE------------PDTEAYAASK---GGLLALTHALAISLGPEIRVNAVSPGW 188 (255)
T ss_pred cCcEEEEEcchhhcCCC------------CCCcchHHHH---HHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence 23689999997654321 1136799999 678899998887754 5666666654
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=1e-05 Score=80.99 Aligned_cols=117 Identities=14% Similarity=0.192 Sum_probs=87.4
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCCC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVY 319 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~----~~~~~~ 319 (600)
+++++.+|++|++++.++++.. .+|++||+|+...... ..++....++.|+.++.++++++ ++.+.+
T Consensus 46 ~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~ 125 (270)
T PRK06179 46 GVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSG 125 (270)
T ss_pred CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc
Confidence 5788999999999998887742 5899999999754322 23345678899999998888875 456778
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
++|++||...+.. .|....|+.+| ...+.+++.++.. .+++++.++|+.+
T Consensus 126 ~iv~isS~~~~~~------------~~~~~~Y~~sK---~a~~~~~~~l~~el~~~gi~v~~v~pg~~ 178 (270)
T PRK06179 126 RIINISSVLGFLP------------APYMALYAASK---HAVEGYSESLDHEVRQFGIRVSLVEPAYT 178 (270)
T ss_pred eEEEECCccccCC------------CCCccHHHHHH---HHHHHHHHHHHHHHhhhCcEEEEEeCCCc
Confidence 9999999765532 12236799999 6677777776543 5899999987653
|
|
| >KOG4039|consensus | Back alignment and domain information |
|---|
Probab=98.18 E-value=6.1e-06 Score=73.45 Aligned_cols=153 Identities=20% Similarity=0.133 Sum_probs=96.8
Q ss_pred ccccccCCCCcchHHHHHHHhhhccCCCccEEeccccc-ccc----------cChHHhhhHHhhhhcccccccCCCCEEE
Q psy16545 3 NKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE-GDI----------VSMYANTDLAQKELGWSARCTHDIDCVI 71 (600)
Q Consensus 3 d~~~~~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~-~Dl----------~~~~~~~~~~~~~~~~~~~~~~~~d~Vi 71 (600)
-|.+--|.|++|..|..+-+.......=-.++++-|++ .|- .|.+.+.+.+. ... ++|+.+
T Consensus 17 q~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~k~v~q~~vDf~Kl~~~a~------~~q--g~dV~F 88 (238)
T KOG4039|consen 17 QNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATDKVVAQVEVDFSKLSQLAT------NEQ--GPDVLF 88 (238)
T ss_pred hccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccccceeeeEEechHHHHHHHh------hhc--CCceEE
Confidence 34555688999988887744322211111222223331 110 12222333221 233 899999
Q ss_pred EcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q psy16545 72 HFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEE 151 (600)
Q Consensus 72 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~ 151 (600)
.|-|.+.-.. ....+.++.-.....+.++|++.|+++|+.+||.+.-. ...-.|-+.|-..|+
T Consensus 89 caLgTTRgka---GadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~--------------sSrFlY~k~KGEvE~ 151 (238)
T KOG4039|consen 89 CALGTTRGKA---GADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADP--------------SSRFLYMKMKGEVER 151 (238)
T ss_pred Eeeccccccc---ccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCc--------------ccceeeeeccchhhh
Confidence 9988874322 23346677777788899999999999999999975421 122358889999999
Q ss_pred HHHHHHhhcCCceEEEEecccccCCCCCCCCCC
Q psy16545 152 MLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGE 184 (600)
Q Consensus 152 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~ 184 (600)
-+.++.-+ +++|+|||.+.|..+....|+
T Consensus 152 ~v~eL~F~----~~~i~RPG~ll~~R~esr~ge 180 (238)
T KOG4039|consen 152 DVIELDFK----HIIILRPGPLLGERTESRQGE 180 (238)
T ss_pred hhhhcccc----EEEEecCcceecccccccccc
Confidence 98876432 579999999999987655543
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.4e-05 Score=78.37 Aligned_cols=119 Identities=12% Similarity=0.108 Sum_probs=89.0
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-CccEEEEcccccCcc-----ccccChHHHHHHHHHHHHHHHHHHHH----cCCCE
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-DIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVMKS----HGVYQ 320 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~r 320 (600)
+.+++++.+|+.+.+.+.++++.. .+|+|||+|+..... ...++....++.|+.++.++++++.. .+..+
T Consensus 48 ~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 127 (238)
T PRK08264 48 GPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGA 127 (238)
T ss_pred CCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCE
Confidence 456889999999999998888754 479999999872211 12345567788999999999998763 45678
Q ss_pred EEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 321 LVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 321 ~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+|++||...|... +....|+.+| ...|.+.+.++.. .+++++.+||+.+
T Consensus 128 ~v~~sS~~~~~~~------------~~~~~y~~sK---~a~~~~~~~l~~~~~~~~i~~~~v~pg~v 179 (238)
T PRK08264 128 IVNVLSVLSWVNF------------PNLGTYSASK---AAAWSLTQALRAELAPQGTRVLGVHPGPI 179 (238)
T ss_pred EEEEcChhhccCC------------CCchHhHHHH---HHHHHHHHHHHHHhhhcCeEEEEEeCCcc
Confidence 9999997766421 1136799999 6678888877755 3788888887653
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.2e-05 Score=89.00 Aligned_cols=117 Identities=16% Similarity=0.162 Sum_probs=86.6
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGV- 318 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~~- 318 (600)
.+.++.+|+++.+.+.++++.. ++|+|||+|+...... +.......++.|+.++.++++++. +.+.
T Consensus 471 ~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~ 550 (681)
T PRK08324 471 RALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLG 550 (681)
T ss_pred cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 6789999999999888877642 6899999999653322 223455678999999999977775 3343
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
.+||++||.+.+... +....|+.+| ...+.+++.+.... ++++..++|+.+
T Consensus 551 g~iV~vsS~~~~~~~------------~~~~~Y~asK---aa~~~l~~~la~e~~~~gIrvn~v~Pg~v 604 (681)
T PRK08324 551 GSIVFIASKNAVNPG------------PNFGAYGAAK---AAELHLVRQLALELGPDGIRVNGVNPDAV 604 (681)
T ss_pred cEEEEECCccccCCC------------CCcHHHHHHH---HHHHHHHHHHHHHhcccCeEEEEEeCcee
Confidence 699999997654321 1236899999 67888888887654 578888887764
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.2e-05 Score=79.82 Aligned_cols=121 Identities=12% Similarity=0.070 Sum_probs=85.4
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc-----
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----- 316 (600)
+.++.++.+|+.+++.+.++++. .++|+|||+|+...... ..+.....++.|+.++.++++++...
T Consensus 60 ~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~ 139 (259)
T PRK08213 60 GIDALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPR 139 (259)
T ss_pred CCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhc
Confidence 34678899999999988766553 26899999998643222 22344567889999999999988654
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeec
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFY 382 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~ 382 (600)
+.++||++||...+...... .+....|+.+| ...|.+++.+++.. ++++..++|+
T Consensus 140 ~~~~~v~~sS~~~~~~~~~~--------~~~~~~Y~~sK---a~~~~~~~~~a~~~~~~gi~v~~v~Pg 197 (259)
T PRK08213 140 GYGRIINVASVAGLGGNPPE--------VMDTIAYNTSK---GAVINFTRALAAEWGPHGIRVNAIAPG 197 (259)
T ss_pred CCeEEEEECChhhccCCCcc--------ccCcchHHHHH---HHHHHHHHHHHHHhcccCEEEEEEecC
Confidence 56799999997665432110 01236899999 67889999888764 5556565554
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.5e-05 Score=77.59 Aligned_cols=116 Identities=16% Similarity=0.132 Sum_probs=84.2
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcc------ccccChHHHHHHHHHHHHHHHHHHHHc----
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG------ESMQEPLMYYKNNLIATINLLEVMKSH---- 316 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~------~~~~~~~~~~~~Nv~gt~~ll~~~~~~---- 316 (600)
.++.++.+|+.+.+++.++++. .++|++||+|+..... ...++....++.|+.++.++++++...
T Consensus 66 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 145 (280)
T PLN02253 66 PNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL 145 (280)
T ss_pred CceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc
Confidence 3578999999999998887764 2689999999875321 123456778999999999999987643
Q ss_pred CCCEEEEecCcc-cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 317 GVYQLVFSSSCT-VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 317 ~~~r~v~~SS~~-vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
+..++|++||.+ +++.. ....|+.+| ...|.+++.++.+. ++++..++|+.
T Consensus 146 ~~g~ii~isS~~~~~~~~-------------~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~i~pg~ 200 (280)
T PLN02253 146 KKGSIVSLCSVASAIGGL-------------GPHAYTGSK---HAVLGLTRSVAAELGKHGIRVNCVSPYA 200 (280)
T ss_pred CCceEEEecChhhcccCC-------------CCcccHHHH---HHHHHHHHHHHHHhhhcCeEEEEEeeCc
Confidence 335888888854 34321 125799999 67888998888764 56666666554
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=4e-05 Score=76.31 Aligned_cols=119 Identities=11% Similarity=0.043 Sum_probs=87.3
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcccc-----ccChHHHHHHHHHHHHHHHHHHHH---cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGES-----MQEPLMYYKNNLIATINLLEVMKS---HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~~-----~~~~~~~~~~Nv~gt~~ll~~~~~---~~ 317 (600)
+..+.++.+|+.+.+.+..+++.. ++|+|||+|+....... .+.....++.|+.++.++++.+.. .+
T Consensus 49 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 128 (263)
T PRK06181 49 GGEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS 128 (263)
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 456888999999999988877643 68999999987543221 222456789999999999999864 23
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.+++|++||...|... +....|+.+| ...+.+++.+... .+++++.++|+.+
T Consensus 129 ~~~iv~~sS~~~~~~~------------~~~~~Y~~sK---~~~~~~~~~l~~~~~~~~i~~~~i~pg~v 183 (263)
T PRK06181 129 RGQIVVVSSLAGLTGV------------PTRSGYAASK---HALHGFFDSLRIELADDGVAVTVVCPGFV 183 (263)
T ss_pred CCEEEEEecccccCCC------------CCccHHHHHH---HHHHHHHHHHHHHhhhcCceEEEEecCcc
Confidence 4789999998776431 1136899999 6677777776543 4788888888653
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.4e-05 Score=77.93 Aligned_cols=114 Identities=15% Similarity=0.242 Sum_probs=83.2
Q ss_pred eEEEeecCChhhHHHHhhc----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCCCEEE
Q psy16545 255 DFYSCDLVDKNRLGEIFAK----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLV 322 (600)
Q Consensus 255 ~~i~~Dl~~~~~l~~~l~~----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~~~r~v 322 (600)
+++.+|+.+.+++.+.++. .++|++||+|+...... ..++....++.|+.++.++.+++. +.+.+++|
T Consensus 44 ~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 123 (234)
T PRK07577 44 ELFACDLADIEQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIV 123 (234)
T ss_pred eEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 4678999999887766553 36899999999754322 223455678899999877766654 45678999
Q ss_pred EecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 323 FSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 323 ~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
++||..+|+.. ....|+.+| ...|.+++.++.. ++++++.++|+.+
T Consensus 124 ~~sS~~~~~~~-------------~~~~Y~~sK---~a~~~~~~~~a~e~~~~gi~v~~i~pg~~ 172 (234)
T PRK07577 124 NICSRAIFGAL-------------DRTSYSAAK---SALVGCTRTWALELAEYGITVNAVAPGPI 172 (234)
T ss_pred EEccccccCCC-------------CchHHHHHH---HHHHHHHHHHHHHHHhhCcEEEEEecCcc
Confidence 99998877532 136799999 6677777776643 4899999998654
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.2e-05 Score=75.36 Aligned_cols=118 Identities=19% Similarity=0.222 Sum_probs=79.7
Q ss_pred CccEEecccccccccChHHhhhHHhhhhcccccccC-CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH
Q psy16545 30 PVPYIVEARREGDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM 104 (600)
Q Consensus 30 ~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~ 104 (600)
.++++ .+|++|++++.++.++ +.++. .++.|||+|+...... ...+....+..-+.|+.+|.++.
T Consensus 54 ~v~~~-----~~Dv~d~~~v~~~~~~-----~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~ 123 (181)
T PF08659_consen 54 RVEYV-----QCDVTDPEAVAAALAQ-----LRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEAL 123 (181)
T ss_dssp EEEEE-----E--TTSHHHHHHHHHT-----SHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeee-----ccCccCHHHHHHHHHH-----HHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHh
Confidence 45666 7999999999986554 33332 5899999999874321 22334557888899999999999
Q ss_pred HHcCCCeEEEecCcc-ccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEeccc
Q psy16545 105 KSHGVYQLVFSSSCT-VYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFN 172 (600)
Q Consensus 105 ~~~~~~r~I~~SS~~-vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~ 172 (600)
....++.||++||.. +.|. ...+.|+.+-...+.+.+..... +.++..+..+.
T Consensus 124 ~~~~l~~~i~~SSis~~~G~-------------~gq~~YaaAN~~lda~a~~~~~~--g~~~~sI~wg~ 177 (181)
T PF08659_consen 124 ENRPLDFFILFSSISSLLGG-------------PGQSAYAAANAFLDALARQRRSR--GLPAVSINWGA 177 (181)
T ss_dssp TTTTTSEEEEEEEHHHHTT--------------TTBHHHHHHHHHHHHHHHHHHHT--TSEEEEEEE-E
T ss_pred hcCCCCeEEEECChhHhccC-------------cchHhHHHHHHHHHHHHHHHHhC--CCCEEEEEccc
Confidence 888888999999974 4664 34588999999999988876553 78888887653
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=2.1e-05 Score=77.99 Aligned_cols=118 Identities=14% Similarity=0.080 Sum_probs=86.9
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
+..++++.+|+++.+++...++. .++|+|||+|+...... ...++...++.|+.++..+++++... +
T Consensus 66 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 145 (256)
T PRK12748 66 GVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA 145 (256)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC
Confidence 44688999999999988776664 25899999998753322 22345667899999999999988643 3
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.+++|++||...++... ....|+.+| ...+.+++.++.. .+++++.++|+.
T Consensus 146 ~~~iv~~ss~~~~~~~~------------~~~~Y~~sK---~a~~~~~~~la~e~~~~~i~v~~i~Pg~ 199 (256)
T PRK12748 146 GGRIINLTSGQSLGPMP------------DELAYAATK---GAIEAFTKSLAPELAEKGITVNAVNPGP 199 (256)
T ss_pred CeEEEEECCccccCCCC------------CchHHHHHH---HHHHHHHHHHHHHHHHhCeEEEEEEeCc
Confidence 46999999987664321 126799999 6678888777654 478888888754
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.6e-05 Score=77.30 Aligned_cols=118 Identities=15% Similarity=0.097 Sum_probs=83.3
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHH----HHHHHcCCC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLL----EVMKSHGVY 319 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll----~~~~~~~~~ 319 (600)
++.++.+|+++.+++.++++.. ++|++||+|+..... ...++....++.|+.++..+. ..+++.+..
T Consensus 52 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g 131 (255)
T PRK06463 52 GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNG 131 (255)
T ss_pred CCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc
Confidence 5788999999999988877642 689999999874321 122345567889999965554 444444557
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
++|++||...++... +....|+.|| ...+.+++.++.. .++++..++|+.+
T Consensus 132 ~iv~isS~~~~~~~~-----------~~~~~Y~asK---aa~~~~~~~la~e~~~~~i~v~~i~Pg~v 185 (255)
T PRK06463 132 AIVNIASNAGIGTAA-----------EGTTFYAITK---AGIIILTRRLAFELGKYGIRVNAVAPGWV 185 (255)
T ss_pred EEEEEcCHHhCCCCC-----------CCccHhHHHH---HHHHHHHHHHHHHhhhcCeEEEEEeeCCC
Confidence 999999987764211 1136799999 6678888887754 4677777776543
|
|
| >KOG4169|consensus | Back alignment and domain information |
|---|
Probab=98.10 E-value=7.4e-06 Score=76.29 Aligned_cols=119 Identities=21% Similarity=0.127 Sum_probs=86.2
Q ss_pred CCccEEecccccccccChHHhhhHHhhhhcccccccC-CCCEEEEcCcccCcccCCCChhhhHHhHHHHHHH----HHHH
Q psy16545 29 KPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATIN----LLEV 103 (600)
Q Consensus 29 ~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~----ll~a 103 (600)
..+.|+ ++|+++..++++..++ .+... .+|++||.||... ..+++..+.+|+.|..+ .+..
T Consensus 55 ~~v~F~-----~~DVt~~~~~~~~f~k-----i~~~fg~iDIlINgAGi~~----dkd~e~Ti~vNLtgvin~T~~alpy 120 (261)
T KOG4169|consen 55 VSVIFI-----KCDVTNRGDLEAAFDK-----ILATFGTIDILINGAGILD----DKDWERTINVNLTGVINGTQLALPY 120 (261)
T ss_pred ceEEEE-----EeccccHHHHHHHHHH-----HHHHhCceEEEEccccccc----chhHHHhhccchhhhhhhhhhhhhh
Confidence 467888 9999999888886665 55544 4999999999975 56788899999876555 4555
Q ss_pred HHHc--CC-CeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc----CCceEEEEecccc
Q psy16545 104 MKSH--GV-YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH----KEWNIISLRYFNP 173 (600)
Q Consensus 104 ~~~~--~~-~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~~~v 173 (600)
+.+. |. .-+|.+||. +|- +|. +-.+.|+.||...-..+|+++... .|+++..+.||.+
T Consensus 121 Mdk~~gG~GGiIvNmsSv--~GL---------~P~-p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t 185 (261)
T KOG4169|consen 121 MDKKQGGKGGIIVNMSSV--AGL---------DPM-PVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFT 185 (261)
T ss_pred hhhhcCCCCcEEEEeccc--ccc---------Ccc-ccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcc
Confidence 5443 22 358889985 443 133 446789999999999999876543 2788887777544
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=8.8e-05 Score=73.20 Aligned_cols=119 Identities=13% Similarity=0.051 Sum_probs=83.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc-----cccccChHHHHHHHHHHHHHHHHHHH----Hc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMK----SH 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~----~~ 316 (600)
+..+.++.+|+.+.+++.+.++.. ++|.+||+|+.... ....++....++.|+.++.++++.+. +.
T Consensus 45 ~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 124 (248)
T PRK10538 45 GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER 124 (248)
T ss_pred ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 456889999999999888776542 68999999986421 12334556778999999766666554 45
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+.+++|++||...+.. . +....|+.+| ...+.+.+.++.. .++++..++|+.+
T Consensus 125 ~~~~iv~isS~~~~~~-----------~-~~~~~Y~~sK---~~~~~~~~~l~~~~~~~~i~v~~v~pg~i 180 (248)
T PRK10538 125 NHGHIINIGSTAGSWP-----------Y-AGGNVYGATK---AFVRQFSLNLRTDLHGTAVRVTDIEPGLV 180 (248)
T ss_pred CCcEEEEECCcccCCC-----------C-CCCchhHHHH---HHHHHHHHHHHHHhcCCCcEEEEEeCCee
Confidence 6679999999764321 1 1236899999 6677887777654 3577777776543
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=3.1e-05 Score=78.56 Aligned_cols=119 Identities=14% Similarity=0.101 Sum_probs=88.7
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc-----cccccChHHHHHHHHHHHHHHHHHHHHc--CC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMKSH--GV 318 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~ 318 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+.... ..+.++....++.|+.++.++++++... .-
T Consensus 99 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 178 (294)
T PRK07985 99 GRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG 178 (294)
T ss_pred CCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC
Confidence 446788999999998887776542 58999999986321 1233456778999999999999998753 12
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.++|++||.+.|... +....|+.+| ...+.+++.++.+ +|+++..++|+.+
T Consensus 179 g~iv~iSS~~~~~~~------------~~~~~Y~asK---aal~~l~~~la~el~~~gIrvn~i~PG~v 232 (294)
T PRK07985 179 ASIITTSSIQAYQPS------------PHLLDYAATK---AAILNYSRGLAKQVAEKGIRVNIVAPGPI 232 (294)
T ss_pred CEEEEECCchhccCC------------CCcchhHHHH---HHHHHHHHHHHHHHhHhCcEEEEEECCcC
Confidence 589999998877432 1135799999 6678888887765 5888888888764
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=6.8e-05 Score=73.88 Aligned_cols=117 Identities=16% Similarity=0.127 Sum_probs=83.9
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----CC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----GV 318 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~ 318 (600)
..+.++.+|+.+.+++.++++. .++|+|||+++...... ........++.|+.++.++++++... +.
T Consensus 56 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 135 (250)
T PRK12939 56 GRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGR 135 (250)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 4688899999999998887764 26899999998754321 22344566889999999999888653 34
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.++|++||...+... +....|+.+| ...|.+++.++.. .++++..++|+.
T Consensus 136 g~iv~isS~~~~~~~------------~~~~~y~~sK---~~~~~~~~~l~~~~~~~~i~v~~v~pg~ 188 (250)
T PRK12939 136 GRIVNLASDTALWGA------------PKLGAYVASK---GAVIGMTRSLARELGGRGITVNAIAPGL 188 (250)
T ss_pred eEEEEECchhhccCC------------CCcchHHHHH---HHHHHHHHHHHHHHhhhCEEEEEEEECC
Confidence 599999997654321 1125799999 6678888877754 466677777653
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=3e-05 Score=76.46 Aligned_cols=117 Identities=15% Similarity=0.120 Sum_probs=85.1
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc--CCC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVY 319 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~ 319 (600)
+..+.++.+|+.+.+.+..+++. .++|++||+|+...... ..+++...++.|+.++.++++++... ...
T Consensus 51 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 130 (249)
T PRK06500 51 GESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPA 130 (249)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCC
Confidence 45678899999998877665543 25899999998753221 23456678999999999999999852 234
Q ss_pred EEEEecC-cccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 320 QLVFSSS-CTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 320 r~v~~SS-~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
++|+.|| .+.||.. ....|+.+| ...|.+++.++.+ .++++..+||+.
T Consensus 131 ~~i~~~S~~~~~~~~-------------~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~i~pg~ 182 (249)
T PRK06500 131 SIVLNGSINAHIGMP-------------NSSVYAASK---AALLSLAKTLSGELLPRGIRVNAVSPGP 182 (249)
T ss_pred EEEEEechHhccCCC-------------CccHHHHHH---HHHHHHHHHHHHHhhhcCeEEEEEeeCc
Confidence 6777766 4556531 237899999 6788888888754 378888888765
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.7e-05 Score=78.61 Aligned_cols=118 Identities=12% Similarity=0.125 Sum_probs=88.2
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCc-----cccccChHHHHHHHHHHHHHHHHHHHHc---C
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMKSH---G 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~---~ 317 (600)
+.++.++.+|+++.+++..+++. .++|+|||+|+.... ....++....++.|+.++..+++++... .
T Consensus 53 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 132 (258)
T PRK07890 53 GRRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES 132 (258)
T ss_pred CCceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC
Confidence 45678999999999988877654 268999999986432 1223455678999999999999998753 2
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.+++|++||...+... +....|+.+| ...+.+++.++.. .++++..++|+.
T Consensus 133 ~~~ii~~sS~~~~~~~------------~~~~~Y~~sK---~a~~~l~~~~a~~~~~~~i~v~~v~pg~ 186 (258)
T PRK07890 133 GGSIVMINSMVLRHSQ------------PKYGAYKMAK---GALLAASQSLATELGPQGIRVNSVAPGY 186 (258)
T ss_pred CCEEEEEechhhccCC------------CCcchhHHHH---HHHHHHHHHHHHHHhhcCcEEEEEeCCc
Confidence 3589999997654311 1236799999 6678888888764 478888898876
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=2.8e-05 Score=76.17 Aligned_cols=119 Identities=16% Similarity=0.139 Sum_probs=86.9
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+.++.++.+|+++..++.++++.. ++|+|||+|+...... ..++....++.|+.++.++++++.. .+
T Consensus 55 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 134 (239)
T PRK07666 55 GVKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ 134 (239)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence 446889999999999988887642 6899999998754321 2234466789999999999888764 35
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.+++|++||...+... +....|+.+| ...+.+++.+... .+++++.+||+.+
T Consensus 135 ~~~iv~~ss~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~~a~e~~~~gi~v~~v~pg~v 189 (239)
T PRK07666 135 SGDIINISSTAGQKGA------------AVTSAYSASK---FGVLGLTESLMQEVRKHNIRVTALTPSTV 189 (239)
T ss_pred CcEEEEEcchhhccCC------------CCCcchHHHH---HHHHHHHHHHHHHhhccCcEEEEEecCcc
Confidence 6789999997654321 1136799999 5567777766543 5888999998764
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.06 E-value=4.1e-05 Score=75.65 Aligned_cols=119 Identities=12% Similarity=0.066 Sum_probs=88.3
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+.++.++.+|+.+.+++.++++. .++|+|||+|+...... ..+++...++.|+.++.++++++.. .+
T Consensus 47 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 126 (252)
T PRK08220 47 DYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR 126 (252)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC
Confidence 34578899999999998887764 24899999998754322 2345667899999999999998763 34
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
..++|++||...... . +....|+.+| ...+.+++.+... +++++..++|+.+
T Consensus 127 ~g~iv~~ss~~~~~~-----------~-~~~~~Y~~sK---~a~~~~~~~la~e~~~~~i~v~~i~pg~v 181 (252)
T PRK08220 127 SGAIVTVGSNAAHVP-----------R-IGMAAYGASK---AALTSLAKCVGLELAPYGVRCNVVSPGST 181 (252)
T ss_pred CCEEEEECCchhccC-----------C-CCCchhHHHH---HHHHHHHHHHHHHhhHhCeEEEEEecCcC
Confidence 568999999754321 1 1137899999 6678888888765 6888888887653
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=3e-05 Score=77.00 Aligned_cols=116 Identities=19% Similarity=0.179 Sum_probs=84.5
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc-----ccccChHHHHHHHHHHHHHHHH----HHHHcCC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLE----VMKSHGV 318 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~----~~~~~~~ 318 (600)
.+.++.+|+++.+++.++++.. .+|++||+|+..... ...++....++.|+.++.++++ .+++.+.
T Consensus 51 ~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~ 130 (257)
T PRK07024 51 RVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARR 130 (257)
T ss_pred eeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCC
Confidence 5789999999999888776541 379999999875322 1224456788999999988777 4455566
Q ss_pred CEEEEecCcccc-cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHH---HHhCCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVY-GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFE---RVTGNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vY-g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~---~~~~~~~~~~r~~~~ 384 (600)
.++|++||.+.+ +. |....|+.|| ...+.+++.+. ..++++++.++|+.+
T Consensus 131 ~~iv~isS~~~~~~~-------------~~~~~Y~asK---~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v 184 (257)
T PRK07024 131 GTLVGIASVAGVRGL-------------PGAGAYSASK---AAAIKYLESLRVELRPAGVRVVTIAPGYI 184 (257)
T ss_pred CEEEEEechhhcCCC-------------CCCcchHHHH---HHHHHHHHHHHHHhhccCcEEEEEecCCC
Confidence 799999986543 31 1236799999 66777777766 345899999998753
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=2.5e-05 Score=77.40 Aligned_cols=127 Identities=18% Similarity=0.143 Sum_probs=83.1
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc-------cccccChHHHHHHHHHHHHHHHHHHH----H
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV-------GESMQEPLMYYKNNLIATINLLEVMK----S 315 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~-------~~~~~~~~~~~~~Nv~gt~~ll~~~~----~ 315 (600)
..+.++.+|+.+++++.++++.. ++|+|||+|+.... ..+.......+..|+.++..+++++. +
T Consensus 55 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 134 (256)
T PRK09186 55 KKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKK 134 (256)
T ss_pred CceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 34677899999999988877642 38999999964321 11223345667888877766655554 4
Q ss_pred cCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 316 HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 316 ~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.+.+++|++||...+..... +..|+.+..+. ..|+.+| ...+.+++.+... .+++++.++|+.
T Consensus 135 ~~~~~iv~~sS~~~~~~~~~-~~~~~~~~~~~-~~Y~~sK---~a~~~l~~~la~e~~~~~i~v~~i~Pg~ 200 (256)
T PRK09186 135 QGGGNLVNISSIYGVVAPKF-EIYEGTSMTSP-VEYAAIK---AGIIHLTKYLAKYFKDSNIRVNCVSPGG 200 (256)
T ss_pred cCCceEEEEechhhhccccc-hhccccccCCc-chhHHHH---HHHHHHHHHHHHHhCcCCeEEEEEeccc
Confidence 56779999999665432221 12233333222 4799999 6677887777764 467777777654
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=3.5e-05 Score=75.66 Aligned_cols=119 Identities=15% Similarity=0.137 Sum_probs=86.8
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+.++.++.+|+++.+++.++++. .++|++||+|+...... ..++....+..|+.++.++++++. +.+
T Consensus 54 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 133 (241)
T PRK07454 54 GVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG 133 (241)
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC
Confidence 35688999999999988777664 25899999998753221 223456678899999888877764 344
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHH---HhCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER---VTGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~---~~~~~~~~~r~~~~ 384 (600)
..++|++||...++... ....|+.+| ...+.+.+.++. ..+++++.+||+.+
T Consensus 134 ~~~iv~isS~~~~~~~~------------~~~~Y~~sK---~~~~~~~~~~a~e~~~~gi~v~~i~pg~i 188 (241)
T PRK07454 134 GGLIINVSSIAARNAFP------------QWGAYCVSK---AALAAFTKCLAEEERSHGIRVCTITLGAV 188 (241)
T ss_pred CcEEEEEccHHhCcCCC------------CccHHHHHH---HHHHHHHHHHHHHhhhhCCEEEEEecCcc
Confidence 57999999988775321 136799999 667777776653 35899999997654
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=4.4e-05 Score=78.35 Aligned_cols=127 Identities=16% Similarity=0.119 Sum_probs=84.4
Q ss_pred eeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc--cccChHHHHHHHHHHHHHHHHH----HHHcCCCEEE
Q psy16545 254 VDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE--SMQEPLMYYKNNLIATINLLEV----MKSHGVYQLV 322 (600)
Q Consensus 254 v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~--~~~~~~~~~~~Nv~gt~~ll~~----~~~~~~~r~v 322 (600)
+.++.+|+++.+++.++++. .++|++||+|+...... ..+.....+++|+.++..++++ +++.+..|+|
T Consensus 73 v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV 152 (315)
T PRK06196 73 VEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVV 152 (315)
T ss_pred CeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEE
Confidence 78899999999988887753 36899999999753222 2234567789999997666554 4445557999
Q ss_pred EecCcccccCC-CCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 323 FSSSCTVYGEP-QFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 323 ~~SS~~vYg~~-~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
++||...+... ......+..+..+ ...|+.|| ...+.+.+.+.+. .+++++.++|+.+
T Consensus 153 ~vSS~~~~~~~~~~~~~~~~~~~~~-~~~Y~~SK---~a~~~~~~~la~~~~~~gi~v~~v~PG~v 214 (315)
T PRK06196 153 ALSSAGHRRSPIRWDDPHFTRGYDK-WLAYGQSK---TANALFAVHLDKLGKDQGVRAFSVHPGGI 214 (315)
T ss_pred EECCHHhccCCCCccccCccCCCCh-HHHHHHHH---HHHHHHHHHHHHHhcCCCcEEEEeeCCcc
Confidence 99997543211 1111111122222 36799999 5667777777654 4788888888764
|
|
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=98.03 E-value=5.4e-05 Score=74.23 Aligned_cols=120 Identities=13% Similarity=0.106 Sum_probs=85.5
Q ss_pred cccccChHHhhhHHhhhhccccccc-CCCCEEEEcCcccCcccCC----CChhhhHHhHHHHHHHHHHHHHHc-----CC
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEVMKSH-----GV 109 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~-----~~ 109 (600)
.+|+.|++++...++. +-.. .-+|.+|||||..-++... ...+..+++|..|+.++++++... ..
T Consensus 90 S~d~~~Y~~v~~~~~~-----l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~ 164 (331)
T KOG1210|consen 90 SVDVIDYDSVSKVIEE-----LRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHL 164 (331)
T ss_pred ccccccHHHHHHHHhh-----hhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccC
Confidence 7999999998884432 1100 1489999999987543332 344568899999999999886432 13
Q ss_pred CeEEEecCcc-ccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC--CceEEEEecccccCCC
Q psy16545 110 YQLVFSSSCT-VYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHK--EWNIISLRYFNPVGAH 177 (600)
Q Consensus 110 ~r~I~~SS~~-vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~--~~~~~ilR~~~v~G~~ 177 (600)
.+++.+||.. -+|. ...+.|..+|.+...+.+.+.++-- ++.++..-|+.+-.|+
T Consensus 165 g~I~~vsS~~a~~~i-------------~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpG 222 (331)
T KOG1210|consen 165 GRIILVSSQLAMLGI-------------YGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPG 222 (331)
T ss_pred cEEEEehhhhhhcCc-------------ccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCc
Confidence 4888888863 3333 4568899999988888887777642 7788888887777774
|
|
| >KOG1207|consensus | Back alignment and domain information |
|---|
Probab=98.02 E-value=3.3e-06 Score=74.86 Aligned_cols=148 Identities=20% Similarity=0.137 Sum_probs=103.4
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccccc------------------ccccChHHhhhHHhhhhccccccc-CCCCE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARRE------------------GDIVSMYANTDLAQKELGWSARCT-HDIDC 69 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~------------------~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~ 69 (600)
+||+.-.+|+.+.. .+...+.++++..|++ +|+.+.+.+.+ .+-. .-+|.
T Consensus 12 vTgagaGIG~~~v~--~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~---------~l~~v~pidg 80 (245)
T KOG1207|consen 12 VTGAGAGIGKEIVL--SLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFK---------LLVPVFPIDG 80 (245)
T ss_pred eecccccccHHHHH--HHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHH---------hhcccCchhh
Confidence 56666668888843 4444555666556654 45555555555 3322 34899
Q ss_pred EEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc----CC-CeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 70 VIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----GV-YQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 70 Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~-~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
++|+||...... ..++....|++|+.+..++.+...+. ++ ..+|.+||.+..- +. ...+
T Consensus 81 LVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R-----------~~-~nHt 148 (245)
T KOG1207|consen 81 LVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIR-----------PL-DNHT 148 (245)
T ss_pred hhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccc-----------cc-CCce
Confidence 999999864322 33556678999999999998884332 22 4699999975321 34 5678
Q ss_pred hHHHHHHHHHHHHHHHHhhcC--CceEEEEecccccCCCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAHK--EWNIISLRYFNPVGAHPS 179 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~~--~~~~~ilR~~~v~G~~~~ 179 (600)
.|..+|.+.+.+.+.++.+.. ++++..+.|..|...+..
T Consensus 149 vYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~ 189 (245)
T KOG1207|consen 149 VYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGR 189 (245)
T ss_pred EEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccc
Confidence 999999999999999998762 789999999999887633
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=5.1e-05 Score=76.13 Aligned_cols=118 Identities=14% Similarity=0.083 Sum_probs=84.9
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc---CCC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH---GVY 319 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~---~~~ 319 (600)
.+++++.+|+.+.+.+.++++.. ++|++||+|+...... ..++....++.|+.++.++++++... +..
T Consensus 44 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g 123 (274)
T PRK05693 44 AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRG 123 (274)
T ss_pred CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC
Confidence 35778899999999888776543 6899999999753322 23455677899999999999887542 346
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
++|++||.+.+.. .+....|+.+| ...+.+.+.++.+ +|++++.++|+.+
T Consensus 124 ~iv~isS~~~~~~------------~~~~~~Y~~sK---~al~~~~~~l~~e~~~~gi~v~~v~pg~v 176 (274)
T PRK05693 124 LVVNIGSVSGVLV------------TPFAGAYCASK---AAVHALSDALRLELAPFGVQVMEVQPGAI 176 (274)
T ss_pred EEEEECCccccCC------------CCCccHHHHHH---HHHHHHHHHHHHHhhhhCeEEEEEecCcc
Confidence 8999999654321 11236799999 5567777666643 6899999988754
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=7e-05 Score=74.21 Aligned_cols=118 Identities=15% Similarity=0.152 Sum_probs=83.6
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCcccc----ccChHHHHHHHHHHHHHHHHH----HHHcCCCEEE
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEV----MKSHGVYQLV 322 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~----~~~~~~~r~v 322 (600)
+..+.++.+|+.+...+.+.+.. ++|+|||+|+....... ..+....+++|+.++.++.+. +++.+.+++|
T Consensus 50 ~~~~~~~~~D~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv 128 (257)
T PRK09291 50 GLALRVEKLDLTDAIDRAQAAEW-DVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVV 128 (257)
T ss_pred CCcceEEEeeCCCHHHHHHHhcC-CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEE
Confidence 34588999999999988887653 79999999987543222 223345677898887766554 4455668999
Q ss_pred EecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 323 FSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 323 ~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
++||...+... +....|+.+| ...|.+++.+... .+++++.+||+.+
T Consensus 129 ~~SS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~l~~~~~~~gi~~~~v~pg~~ 178 (257)
T PRK09291 129 FTSSMAGLITG------------PFTGAYCASK---HALEAIAEAMHAELKPFGIQVATVNPGPY 178 (257)
T ss_pred EEcChhhccCC------------CCcchhHHHH---HHHHHHHHHHHHHHHhcCcEEEEEecCcc
Confidence 99996543211 2236799999 6678777776643 5899999998655
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.96 E-value=9.1e-05 Score=72.97 Aligned_cols=119 Identities=14% Similarity=0.093 Sum_probs=88.5
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..+.++.+|+++.+++..+++. .++|++||+|+...... ...+....++.|+.++.++++++.. .+
T Consensus 51 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 130 (248)
T TIGR01832 51 GRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQG 130 (248)
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Confidence 44688999999999998876654 25899999998754322 2234556788999999999998764 23
Q ss_pred -CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 318 -VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 318 -~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
..++|++||...|.... ....|+.+| ...+.+++.++... ++++..++|+.+
T Consensus 131 ~~g~iv~~sS~~~~~~~~------------~~~~Y~~sK---aa~~~~~~~la~e~~~~gi~v~~v~pg~v 186 (248)
T TIGR01832 131 RGGKIINIASMLSFQGGI------------RVPSYTASK---HGVAGLTKLLANEWAAKGINVNAIAPGYM 186 (248)
T ss_pred CCeEEEEEecHHhccCCC------------CCchhHHHH---HHHHHHHHHHHHHhCccCcEEEEEEECcC
Confidence 46999999988775321 125799999 66888888888764 788888887654
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=8.9e-05 Score=74.46 Aligned_cols=119 Identities=18% Similarity=0.187 Sum_probs=83.5
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+...... +.++....++.|+.++.++++++. +.+
T Consensus 54 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~ 133 (275)
T PRK05876 54 GFDVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQG 133 (275)
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Confidence 345788999999999988877642 5899999999753322 223345668999999999998875 333
Q ss_pred -CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHH---HhCCCCeeEeeccc
Q psy16545 318 -VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER---VTGNKPVPYIFYNL 384 (600)
Q Consensus 318 -~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~---~~~~~~~~~r~~~~ 384 (600)
..++|++||...+... +....|+.+| ...+.+.+.+.. ..+++++.++|+.+
T Consensus 134 ~~g~iv~isS~~~~~~~------------~~~~~Y~asK---~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v 189 (275)
T PRK05876 134 TGGHVVFTASFAGLVPN------------AGLGAYGVAK---YGVVGLAETLAREVTADGIGVSVLCPMVV 189 (275)
T ss_pred CCCEEEEeCChhhccCC------------CCCchHHHHH---HHHHHHHHHHHHHhhhcCcEEEEEEeCcc
Confidence 4689999998766321 2247899999 433344444332 34889999998764
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=7.2e-05 Score=75.85 Aligned_cols=119 Identities=17% Similarity=0.215 Sum_probs=84.6
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc------cccChHHHHHHHHHHHHHHHHHHH----H
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE------SMQEPLMYYKNNLIATINLLEVMK----S 315 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~------~~~~~~~~~~~Nv~gt~~ll~~~~----~ 315 (600)
+..+.++.+|+.+.+++.++++. .++|++||+|+...... .+.+....++.|+.++.++++++. +
T Consensus 88 ~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 167 (293)
T PRK05866 88 GGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLE 167 (293)
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34578899999999988887763 26899999998754322 123345678999999888877654 4
Q ss_pred cCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 316 HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 316 ~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.+..++|++||.++++.. .|....|+.+| ...+.+++.++.. ++++++.++|+.
T Consensus 168 ~~~g~iv~isS~~~~~~~-----------~p~~~~Y~asK---aal~~l~~~la~e~~~~gI~v~~v~pg~ 224 (293)
T PRK05866 168 RGDGHIINVATWGVLSEA-----------SPLFSVYNASK---AALSAVSRVIETEWGDRGVHSTTLYYPL 224 (293)
T ss_pred cCCcEEEEECChhhcCCC-----------CCCcchHHHHH---HHHHHHHHHHHHHhcccCcEEEEEEcCc
Confidence 566799999997665421 12236799999 6677777777654 467777777653
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.0001 Score=72.31 Aligned_cols=117 Identities=16% Similarity=0.197 Sum_probs=83.0
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..++++.+|+.+.+++.++++. .++|.|||+|+..... ....+....++.|+.++.++++++.. .+
T Consensus 51 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 130 (245)
T PRK12936 51 GERVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR 130 (245)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC
Confidence 45678899999999988877653 2589999999875322 12345567789999999988887653 35
Q ss_pred CCEEEEecCcc-cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 318 VYQLVFSSSCT-VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~-vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.++||++||.. .|+.. ....|+.+| ...+.+++.++.. .+++++.++|+.
T Consensus 131 ~~~iv~~sS~~~~~~~~-------------~~~~Y~~sk---~a~~~~~~~la~~~~~~~i~v~~i~pg~ 184 (245)
T PRK12936 131 YGRIINITSVVGVTGNP-------------GQANYCASK---AGMIGFSKSLAQEIATRNVTVNCVAPGF 184 (245)
T ss_pred CCEEEEECCHHhCcCCC-------------CCcchHHHH---HHHHHHHHHHHHHhhHhCeEEEEEEECc
Confidence 67999999964 44431 125699999 5556666665543 468888888754
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.92 E-value=6.3e-05 Score=74.47 Aligned_cols=119 Identities=12% Similarity=0.094 Sum_probs=87.3
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
+..+.++.+|+.+.+++.++++. .++|++||+|+...... ..++....+++|+.++.++++++... +
T Consensus 56 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 135 (253)
T PRK08993 56 GRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQG 135 (253)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC
Confidence 44678899999999888887764 26899999998753221 23456778999999999998887642 2
Q ss_pred -CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 -VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 -~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
-.++|++||...+.... ....|+.+| ...+.+.+.++.+ +++++..++|+.+
T Consensus 136 ~~g~iv~isS~~~~~~~~------------~~~~Y~~sK---aa~~~~~~~la~e~~~~gi~v~~v~pG~v 191 (253)
T PRK08993 136 NGGKIINIASMLSFQGGI------------RVPSYTASK---SGVMGVTRLMANEWAKHNINVNAIAPGYM 191 (253)
T ss_pred CCeEEEEECchhhccCCC------------CCcchHHHH---HHHHHHHHHHHHHhhhhCeEEEEEeeCcc
Confidence 25899999987765321 125799999 6677888877765 4677777776654
|
|
| >KOG1204|consensus | Back alignment and domain information |
|---|
Probab=97.92 E-value=2.8e-05 Score=72.51 Aligned_cols=100 Identities=15% Similarity=0.056 Sum_probs=78.1
Q ss_pred CCCEEEEcCcccCcc-------cCCCChhhhHHhHHHHHHHHHHHHHHc--C---CCeEEEecCccccCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVG-------ESMQEPLMYYKNNLIATINLLEVMKSH--G---VYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~-------~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~---~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
+.|.||||||...+- .....+...++.|+.+...|...+... + .+.+|++||.+..-
T Consensus 82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~----------- 150 (253)
T KOG1204|consen 82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR----------- 150 (253)
T ss_pred ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc-----------
Confidence 489999999987541 122457779999999999998877543 2 26789999975432
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhcC-CceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAHK-EWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~~-~~~~~ilR~~~v~G~~ 177 (600)
|. ..+..|+.+|++.+.+.+.++.+-| ++.++.++||.+=.+.
T Consensus 151 p~-~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~m 194 (253)
T KOG1204|consen 151 PF-SSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQM 194 (253)
T ss_pred cc-cHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchh
Confidence 33 5577899999999999999998876 8999999998887764
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=8e-05 Score=73.97 Aligned_cols=118 Identities=13% Similarity=0.102 Sum_probs=83.4
Q ss_pred ceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcc------ccccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG------ESMQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~------~~~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
.+.++.+|+.+.+.+.++++. .++|+|||+|+..... ...++....+++|+.++.++++++. +.+
T Consensus 50 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 129 (260)
T PRK06523 50 GVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG 129 (260)
T ss_pred ceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC
Confidence 578899999999888766543 2589999999854211 1234556778899999987766554 445
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
..++|++||...+... .+....|+.+| ...+.+++.++.. .++++..++|+.+
T Consensus 130 ~g~ii~isS~~~~~~~-----------~~~~~~Y~~sK---~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v 185 (260)
T PRK06523 130 SGVIIHVTSIQRRLPL-----------PESTTAYAAAK---AALSTYSKSLSKEVAPKGVRVNTVSPGWI 185 (260)
T ss_pred CcEEEEEecccccCCC-----------CCCcchhHHHH---HHHHHHHHHHHHHHhhcCcEEEEEecCcc
Confidence 5789999997655321 11236899999 6678888887754 4788888887664
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=8.1e-05 Score=73.66 Aligned_cols=117 Identities=15% Similarity=0.088 Sum_probs=85.0
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..+.++.+|+.+.+++.+.++.. ++|++||+|+...... ...+....++.|+.++.++++++.. .+
T Consensus 60 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 139 (255)
T PRK06841 60 GGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG 139 (255)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC
Confidence 445678999999999888877642 6899999999754322 2234456789999999999998874 35
Q ss_pred CCEEEEecCccc-ccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTV-YGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~v-Yg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.+++|++||... ++. +....|+.+| ...+.+++.++.+ .++++..++|+.
T Consensus 140 ~~~iv~~sS~~~~~~~-------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~pg~ 193 (255)
T PRK06841 140 GGKIVNLASQAGVVAL-------------ERHVAYCASK---AGVVGMTKVLALEWGPYGITVNAISPTV 193 (255)
T ss_pred CceEEEEcchhhccCC-------------CCCchHHHHH---HHHHHHHHHHHHHHHhhCeEEEEEEeCc
Confidence 679999999653 332 1135799999 5677777777765 467777777654
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=8e-05 Score=73.93 Aligned_cols=118 Identities=15% Similarity=0.146 Sum_probs=85.6
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+..+.++.+|+.+.+.+.++++.. ++|++||+|+...... ...+....++.|+.++..+++++. +.+
T Consensus 62 ~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 141 (258)
T PRK06935 62 GRKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG 141 (258)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Confidence 456889999999999888877643 5899999998643211 223455678899999877776665 345
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
..++|++||...+... +....|+.+| ...+.+++.++++ .++++..++|+.
T Consensus 142 ~g~iv~isS~~~~~~~------------~~~~~Y~asK---~a~~~~~~~la~e~~~~gi~v~~i~PG~ 195 (258)
T PRK06935 142 SGKIINIASMLSFQGG------------KFVPAYTASK---HGVAGLTKAFANELAAYNIQVNAIAPGY 195 (258)
T ss_pred CeEEEEECCHHhccCC------------CCchhhHHHH---HHHHHHHHHHHHHhhhhCeEEEEEEecc
Confidence 5799999998776432 1135799999 6678888888765 367777777654
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00011 Score=73.21 Aligned_cols=118 Identities=14% Similarity=0.102 Sum_probs=86.6
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+.++.++.+|+++..++.+++.. .++|++||+|+..... ...++....++.|+.++..+++++.. .+
T Consensus 58 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 137 (265)
T PRK07097 58 GIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG 137 (265)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Confidence 34688899999999998887764 2589999999975432 23345566788999998877777653 45
Q ss_pred CCEEEEecCcc-cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCT-VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~-vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
..++|++||.. .++. +....|+.+| ...+.+++.++.+. ++++..++|+.+
T Consensus 138 ~g~iv~isS~~~~~~~-------------~~~~~Y~~sK---aal~~l~~~la~e~~~~gi~v~~v~Pg~v 192 (265)
T PRK07097 138 HGKIINICSMMSELGR-------------ETVSAYAAAK---GGLKMLTKNIASEYGEANIQCNGIGPGYI 192 (265)
T ss_pred CcEEEEEcCccccCCC-------------CCCccHHHHH---HHHHHHHHHHHHHhhhcCceEEEEEeccc
Confidence 67999999953 3432 1136799999 66788888887664 788888887754
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=7.9e-05 Score=74.86 Aligned_cols=118 Identities=14% Similarity=0.057 Sum_probs=84.0
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc-------------------cccChHHHHHHHHHHH
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE-------------------SMQEPLMYYKNNLIAT 306 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~-------------------~~~~~~~~~~~Nv~gt 306 (600)
+.++.++.+|+.+...+..+++. .++|++||+|+...... ..++....++.|+.++
T Consensus 58 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 137 (278)
T PRK08277 58 GGEALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGT 137 (278)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHH
Confidence 34578899999999888877654 26899999998643221 1234566788999998
Q ss_pred HHHHHHHH----HcCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeE
Q psy16545 307 INLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPY 379 (600)
Q Consensus 307 ~~ll~~~~----~~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~ 379 (600)
..+++++. +.+..++|++||...|... +....|+.+| ...+.+++.++... ++++..+
T Consensus 138 ~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------~~~~~Y~~sK---~a~~~l~~~la~e~~~~girvn~v 202 (278)
T PRK08277 138 LLPTQVFAKDMVGRKGGNIINISSMNAFTPL------------TKVPAYSAAK---AAISNFTQWLAVHFAKVGIRVNAI 202 (278)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEccchhcCCC------------CCCchhHHHH---HHHHHHHHHHHHHhCccCeEEEEE
Confidence 86665543 4455799999998876421 1236799999 66788888887764 5777777
Q ss_pred eecc
Q psy16545 380 IFYN 383 (600)
Q Consensus 380 r~~~ 383 (600)
+|+.
T Consensus 203 ~Pg~ 206 (278)
T PRK08277 203 APGF 206 (278)
T ss_pred Eecc
Confidence 7655
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=7.7e-05 Score=74.00 Aligned_cols=119 Identities=18% Similarity=0.149 Sum_probs=87.0
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcc---ccccChHHHHHHHHHHHHHHHHHHHHc---CCC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG---ESMQEPLMYYKNNLIATINLLEVMKSH---GVY 319 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~~~~~---~~~ 319 (600)
+..+.++.+|+++.+++..+++. .++|+|||+|+..... ...++....++.|+.++.++.+.+... +.+
T Consensus 54 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 133 (258)
T PRK08628 54 QPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRG 133 (258)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCc
Confidence 45688999999999988887764 2689999999864321 112345667889999999998887642 346
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+||++||...+... +....|+.+| ...+.+++.++.. .++++..++|+.+
T Consensus 134 ~iv~~ss~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~l~~e~~~~~i~v~~v~pg~v 186 (258)
T PRK08628 134 AIVNISSKTALTGQ------------GGTSGYAAAK---GAQLALTREWAVALAKDGVRVNAVIPAEV 186 (258)
T ss_pred EEEEECCHHhccCC------------CCCchhHHHH---HHHHHHHHHHHHHHhhcCeEEEEEecCcc
Confidence 89999997654211 1236899999 6688888888753 4788888888764
|
|
| >KOG3019|consensus | Back alignment and domain information |
|---|
Probab=97.89 E-value=4.8e-05 Score=70.56 Aligned_cols=153 Identities=14% Similarity=0.098 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHcC--CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEee
Q psy16545 304 IATINLLEVMKSHG--VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 381 (600)
Q Consensus 304 ~gt~~ll~~~~~~~--~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~ 381 (600)
..|..|.++..+.. .+.+|.+|..++|-.......+|+.+..-. +....- ++..|...+.-. ...+.+++|.
T Consensus 106 ~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgf-d~~srL---~l~WE~aA~~~~--~~~r~~~iR~ 179 (315)
T KOG3019|consen 106 RVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGF-DILSRL---CLEWEGAALKAN--KDVRVALIRI 179 (315)
T ss_pred eHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCCh-HHHHHH---HHHHHHHhhccC--cceeEEEEEE
Confidence 34677888887763 468999999999987666677888765433 221111 022333333222 2478899999
Q ss_pred cc-cCCCCcchHHHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHH
Q psy16545 382 YN-LGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF 460 (600)
Q Consensus 382 ~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~ 460 (600)
+. +|.+++. +..++..|
T Consensus 180 GvVlG~gGGa-~~~M~lpF------------------------------------------------------------- 197 (315)
T KOG3019|consen 180 GVVLGKGGGA-LAMMILPF------------------------------------------------------------- 197 (315)
T ss_pred eEEEecCCcc-hhhhhhhh-------------------------------------------------------------
Confidence 88 5544443 22222222
Q ss_pred HHHhCCCCceeeccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCC
Q psy16545 461 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQG 540 (600)
Q Consensus 461 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~ 540 (600)
+-..|.|+ |.|.|+ ..+|| ++|++..+..+++++...++.|-..+++
T Consensus 198 ~~g~GGPl---------GsG~Q~----fpWIH--------------------v~DL~~li~~ale~~~v~GViNgvAP~~ 244 (315)
T KOG3019|consen 198 QMGAGGPL---------GSGQQW----FPWIH--------------------VDDLVNLIYEALENPSVKGVINGVAPNP 244 (315)
T ss_pred hhccCCcC---------CCCCee----eeeee--------------------hHHHHHHHHHHHhcCCCCceecccCCCc
Confidence 11124443 455555 88988 9999999999999987788999999999
Q ss_pred ccHHHHHHHHhhhcCCc
Q psy16545 541 TSVLQLLRTFERVTGKP 557 (600)
Q Consensus 541 ~s~~e~~~~~~~~~g~~ 557 (600)
++..|+++.+.++++.+
T Consensus 245 ~~n~Ef~q~lg~aL~Rp 261 (315)
T KOG3019|consen 245 VRNGEFCQQLGSALSRP 261 (315)
T ss_pred cchHHHHHHHHHHhCCC
Confidence 99999999999999864
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=7.5e-05 Score=73.38 Aligned_cols=117 Identities=15% Similarity=0.112 Sum_probs=84.3
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc--CCC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVY 319 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~ 319 (600)
+..+.++.+|+.+.+++.+.++.. ++|++||+|+...... ..++....++.|+.++.++++++.+. ...
T Consensus 54 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 133 (245)
T PRK12937 54 GGRAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGG 133 (245)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCc
Confidence 456889999999999988887742 6899999998753211 22344567889999999999988764 235
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeec
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFY 382 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~ 382 (600)
++|++||...+.. .|....|+.+| ...+.+++.+.... +++++.++|+
T Consensus 134 ~iv~~ss~~~~~~------------~~~~~~Y~~sK---~a~~~~~~~~a~~~~~~~i~v~~i~pg 184 (245)
T PRK12937 134 RIINLSTSVIALP------------LPGYGPYAASK---AAVEGLVHVLANELRGRGITVNAVAPG 184 (245)
T ss_pred EEEEEeeccccCC------------CCCCchhHHHH---HHHHHHHHHHHHHhhhcCeEEEEEEeC
Confidence 8999998765421 12236799999 66788888877653 5666666654
|
|
| >KOG4288|consensus | Back alignment and domain information |
|---|
Probab=97.89 E-value=1.9e-05 Score=73.50 Aligned_cols=91 Identities=22% Similarity=0.163 Sum_probs=68.9
Q ss_pred CCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHH
Q psy16545 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKT 145 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~s 145 (600)
++..++-+++.. .+...+.++|=....+-.+++.+.|+++|+|+|... ||. +. .-.+.|-.+
T Consensus 117 g~t~v~e~~ggf------gn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~----------~~-~i~rGY~~g 178 (283)
T KOG4288|consen 117 GPTFVYEMMGGF------GNIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGL----------PP-LIPRGYIEG 178 (283)
T ss_pred CCcccHHHhcCc------cchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCC----------CC-ccchhhhcc
Confidence 566777666543 455667888888888889999999999999999742 332 11 223579999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEecccccCCCC
Q psy16545 146 KHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHP 178 (600)
Q Consensus 146 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~ 178 (600)
|-++|..+.+. + +.+-+++|||.+||...
T Consensus 179 KR~AE~Ell~~---~-~~rgiilRPGFiyg~R~ 207 (283)
T KOG4288|consen 179 KREAEAELLKK---F-RFRGIILRPGFIYGTRN 207 (283)
T ss_pred chHHHHHHHHh---c-CCCceeeccceeecccc
Confidence 99999877653 3 67889999999999954
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=9.9e-05 Score=72.88 Aligned_cols=118 Identities=14% Similarity=0.138 Sum_probs=83.8
Q ss_pred CCceeEEEeecCChhhHHHHhhcC------CccEEEEcccccCc----------cccccChHHHHHHHHHHHHHHHHHHH
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH------DIDCVIHFAAVKAV----------GESMQEPLMYYKNNLIATINLLEVMK 314 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~------~~d~VihlAa~~~~----------~~~~~~~~~~~~~Nv~gt~~ll~~~~ 314 (600)
+.++.++.+|+.+++++.++++.. ++|++||+|+.... ..+.++....++.|+.++.++++++.
T Consensus 51 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (253)
T PRK08642 51 GDRAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAAL 130 (253)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHH
Confidence 346888999999999888877642 28999999975310 11223445679999999999999886
Q ss_pred H----cCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 315 S----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 315 ~----~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
. .+..++|++||..... +..+ .+.|+.+| ...|.+++.+++.. ++++..++|+.
T Consensus 131 ~~~~~~~~g~iv~iss~~~~~-----------~~~~-~~~Y~~sK---~a~~~l~~~la~~~~~~~i~v~~i~pG~ 191 (253)
T PRK08642 131 PGMREQGFGRIINIGTNLFQN-----------PVVP-YHDYTTAK---AALLGLTRNLAAELGPYGITVNMVSGGL 191 (253)
T ss_pred HHHHhcCCeEEEEECCccccC-----------CCCC-ccchHHHH---HHHHHHHHHHHHHhCccCeEEEEEeecc
Confidence 3 3457999999954321 1122 36899999 67899999988764 56666666543
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00011 Score=75.24 Aligned_cols=128 Identities=13% Similarity=0.074 Sum_probs=87.3
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcc---ccccChHHHHHHHHHHHHHHHHHHHH---cCCCE
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG---ESMQEPLMYYKNNLIATINLLEVMKS---HGVYQ 320 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~~~~---~~~~r 320 (600)
..+.++.+|+.+.+++.++++. .++|++||.|+..... ...+.....+.+|+.+...+.+.+.. .+..|
T Consensus 65 ~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~r 144 (313)
T PRK05854 65 AKLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRAR 144 (313)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCC
Confidence 3578999999999988887664 2589999999975432 23356677899999998877776653 23468
Q ss_pred EEEecCccc-ccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH-----hCCCCeeEeecc
Q psy16545 321 LVFSSSCTV-YGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV-----TGNKPVPYIFYN 383 (600)
Q Consensus 321 ~v~~SS~~v-Yg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~-----~~~~~~~~r~~~ 383 (600)
+|++||.+. ++.....+++++.+..+ ...|+.|| ...+.+.+.++++ .++.+..+.|+.
T Consensus 145 iv~vsS~~~~~~~~~~~~~~~~~~~~~-~~~Y~~SK---~a~~~~~~~la~~~~~~~~gI~v~~v~PG~ 209 (313)
T PRK05854 145 VTSQSSIAARRGAINWDDLNWERSYAG-MRAYSQSK---IAVGLFALELDRRSRAAGWGITSNLAHPGV 209 (313)
T ss_pred eEEEechhhcCCCcCcccccccccCcc-hhhhHHHH---HHHHHHHHHHHHHhhcCCCCeEEEEEecce
Confidence 999999754 44333334444444333 36899999 6677777777653 245555555543
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=9e-05 Score=72.85 Aligned_cols=119 Identities=13% Similarity=0.061 Sum_probs=84.0
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc-----cccChHHHHHHHHHHHHHHHHHHHHc----
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSH---- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~~~~~---- 316 (600)
+..+.++.+|+.+.+++.++++. .++|+|||+|+...... ...+....++.|+.++..+++++...
T Consensus 50 ~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 129 (247)
T PRK09730 50 GGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALK 129 (247)
T ss_pred CCeEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 44578899999999998887774 25799999998643222 12234577899999998888766543
Q ss_pred ---CCCEEEEecCcccc-cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 ---GVYQLVFSSSCTVY-GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 ---~~~r~v~~SS~~vY-g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+.++||++||...+ +.+. . ...|+.+| ...+.+++.++.. .+++++.+||+.+
T Consensus 130 ~~~~~g~~v~~sS~~~~~~~~~-----------~-~~~Y~~sK---~~~~~~~~~l~~~~~~~~i~v~~i~pg~~ 189 (247)
T PRK09730 130 HGGSGGAIVNVSSAASRLGAPG-----------E-YVDYAASK---GAIDTLTTGLSLEVAAQGIRVNCVRPGFI 189 (247)
T ss_pred CCCCCcEEEEECchhhccCCCC-----------c-ccchHhHH---HHHHHHHHHHHHHHHHhCeEEEEEEeCCC
Confidence 12479999997543 3210 1 14699999 6677777776643 4899999998763
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0001 Score=73.08 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=86.0
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCc----cccccChHHHHHHHHHHHHHHHHHHHH----cCC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAV----GESMQEPLMYYKNNLIATINLLEVMKS----HGV 318 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~ 318 (600)
..+.++.+|+.+.+++..+++. .++|++||+|+.... ....++....+..|+.++.++++++.. .+.
T Consensus 60 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 139 (257)
T PRK09242 60 REVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHAS 139 (257)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 4678899999999887776654 258999999986322 123345567789999999999888753 445
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+++|++||...+.... ....|+.+| ...+.+++.++.. .++++..++|+.+
T Consensus 140 ~~ii~~sS~~~~~~~~------------~~~~Y~~sK---~a~~~~~~~la~e~~~~~i~v~~i~Pg~i 193 (257)
T PRK09242 140 SAIVNIGSVSGLTHVR------------SGAPYGMTK---AALLQMTRNLAVEWAEDGIRVNAVAPWYI 193 (257)
T ss_pred ceEEEECccccCCCCC------------CCcchHHHH---HHHHHHHHHHHHHHHHhCeEEEEEEECCC
Confidence 7999999987654321 136799999 6678888877654 4788888887653
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00014 Score=72.24 Aligned_cols=115 Identities=15% Similarity=0.104 Sum_probs=82.1
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcccc----ccChHHHHHHHHHHHHHHHHHHHH----cCCC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMKS----HGVY 319 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~ 319 (600)
.++++.+|+.+++++.++++.. ++|++||+|+....... .++....++.|+.++..+++++.. .+..
T Consensus 45 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g 124 (258)
T PRK06398 45 DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKG 124 (258)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe
Confidence 4678999999999888877642 58999999987532221 223445689999999998887764 3457
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhC--CCCeeEeec
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTG--NKPVPYIFY 382 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~--~~~~~~r~~ 382 (600)
++|++||...+... +....|+.+| ...+.+.+.++.+.+ +++..++|+
T Consensus 125 ~iv~isS~~~~~~~------------~~~~~Y~~sK---aal~~~~~~la~e~~~~i~vn~i~PG 174 (258)
T PRK06398 125 VIINIASVQSFAVT------------RNAAAYVTSK---HAVLGLTRSIAVDYAPTIRCVAVCPG 174 (258)
T ss_pred EEEEeCcchhccCC------------CCCchhhhhH---HHHHHHHHHHHHHhCCCCEEEEEecC
Confidence 99999998766421 2237899999 667888888887653 444444443
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00013 Score=72.98 Aligned_cols=119 Identities=17% Similarity=0.092 Sum_probs=83.6
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccccc----cChHHHHHHHHHHHHHHHHH----HHHcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEV----MKSHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~----~~~~~ 317 (600)
+..+.++.+|+.+.+++.++++. .++|++||+|+........ .+....++.|+.++.++.+. +++.+
T Consensus 48 ~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 127 (270)
T PRK05650 48 GGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK 127 (270)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC
Confidence 45678899999999988887653 2689999999975432222 23345678998877776555 45566
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
..++|++||...+... +....|+.+| ...+.+.+.+..+ .+++++.++|+.+
T Consensus 128 ~~~iv~vsS~~~~~~~------------~~~~~Y~~sK---aa~~~~~~~l~~e~~~~gi~v~~v~Pg~v 182 (270)
T PRK05650 128 SGRIVNIASMAGLMQG------------PAMSSYNVAK---AGVVALSETLLVELADDEIGVHVVCPSFF 182 (270)
T ss_pred CCEEEEECChhhcCCC------------CCchHHHHHH---HHHHHHHHHHHHHhcccCcEEEEEecCcc
Confidence 7899999998665321 1236899999 5566666666654 4788888887653
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00013 Score=72.53 Aligned_cols=117 Identities=15% Similarity=0.136 Sum_probs=85.4
Q ss_pred CCceeEEEeecCChhhHHHHhhc------CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----c
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK------HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----H 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~------~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~ 316 (600)
+..++++.+|+.+.+.+.++++. .++|+|||+|+...... +.++....++.|+.++.++++++.+ .
T Consensus 47 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 126 (260)
T PRK08267 47 AGNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKAT 126 (260)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 35689999999999988877653 25799999999754322 2234567899999999999888753 3
Q ss_pred CCCEEEEecCcc-cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 317 GVYQLVFSSSCT-VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 317 ~~~r~v~~SS~~-vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
+..++|++||.. +||.. ....|+.+| ...+.+.+.+... .+++++.++|+.
T Consensus 127 ~~~~iv~isS~~~~~~~~-------------~~~~Y~~sK---aa~~~~~~~l~~~~~~~~i~v~~i~pg~ 181 (260)
T PRK08267 127 PGARVINTSSASAIYGQP-------------GLAVYSATK---FAVRGLTEALDLEWRRHGIRVADVMPLF 181 (260)
T ss_pred CCCEEEEeCchhhCcCCC-------------CchhhHHHH---HHHHHHHHHHHHHhcccCcEEEEEecCC
Confidence 457899999964 45431 136799999 6677777777644 468888887654
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00018 Score=71.21 Aligned_cols=118 Identities=17% Similarity=0.115 Sum_probs=79.4
Q ss_pred CceeEEEeecCChhhHHHHhhc----CCccEEEEcccccCcc-ccccChH---HHHHHHHHHHHH----HHHHHHHcCCC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK----HDIDCVIHFAAVKAVG-ESMQEPL---MYYKNNLIATIN----LLEVMKSHGVY 319 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~----~~~d~VihlAa~~~~~-~~~~~~~---~~~~~Nv~gt~~----ll~~~~~~~~~ 319 (600)
.+++++.+|+.+.+++.+.++. .++|.+||.++..... ..+.++. ..+++|+.++.. +++.+++.+..
T Consensus 60 ~~v~~~~~D~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~ 139 (253)
T PRK07904 60 SSVEVIDFDALDTDSHPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFG 139 (253)
T ss_pred CceEEEEecCCChHHHHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCc
Confidence 4689999999998886655443 3699999998875322 1222322 458999988766 66777777778
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHH---HHHhCCCCeeEeeccc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTF---ERVTGNKPVPYIFYNL 384 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~---~~~~~~~~~~~r~~~~ 384 (600)
++|++||...+.. .+....|+.||. ....+.+.+ ...++++++.++|+.+
T Consensus 140 ~iv~isS~~g~~~------------~~~~~~Y~~sKa---a~~~~~~~l~~el~~~~i~v~~v~Pg~v 192 (253)
T PRK07904 140 QIIAMSSVAGERV------------RRSNFVYGSTKA---GLDGFYLGLGEALREYGVRVLVVRPGQV 192 (253)
T ss_pred eEEEEechhhcCC------------CCCCcchHHHHH---HHHHHHHHHHHHHhhcCCEEEEEeeCce
Confidence 9999999753211 112357999994 344443333 3456899999998765
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00013 Score=72.08 Aligned_cols=118 Identities=14% Similarity=0.130 Sum_probs=84.8
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc-----ccccChHHHHHHHHHHHHHHHHHHH----Hc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVMK----SH 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~~~~----~~ 316 (600)
+..+.++.+|+.+.+++..+++.. ++|++||+|+..... ...+++...++.|+.++..+++++. +.
T Consensus 55 ~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 134 (253)
T PRK06172 55 GGEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ 134 (253)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 446889999999999888876642 579999999864321 1234556778899999977766543 34
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
+..++|++||...++... ....|+.+| ...+.+++.++... ++++..+.|+.
T Consensus 135 ~~~~ii~~sS~~~~~~~~------------~~~~Y~~sK---aa~~~~~~~la~e~~~~~i~v~~i~PG~ 189 (253)
T PRK06172 135 GGGAIVNTASVAGLGAAP------------KMSIYAASK---HAVIGLTKSAAIEYAKKGIRVNAVCPAV 189 (253)
T ss_pred CCcEEEEECchhhccCCC------------CCchhHHHH---HHHHHHHHHHHHHhcccCeEEEEEEeCC
Confidence 457999999987765321 136799999 66788888887664 56666666654
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00014 Score=72.14 Aligned_cols=118 Identities=18% Similarity=0.133 Sum_probs=83.0
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
+..+.++.+|+.+++.+.++++.. ++|++||+|+...... ..++....++.|+.++..+++++... +
T Consensus 50 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 129 (256)
T PRK08643 50 GGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLG 129 (256)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 346788999999999888877642 5899999998643222 12334567889999988777776542 2
Q ss_pred -CCEEEEecCcccc-cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 -VYQLVFSSSCTVY-GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 -~~r~v~~SS~~vY-g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
-.++|++||...+ +. +....|+.+| ...+.+++.++.. .+++++.++|+.+
T Consensus 130 ~~~~iv~~sS~~~~~~~-------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~i~Pg~v 185 (256)
T PRK08643 130 HGGKIINATSQAGVVGN-------------PELAVYSSTK---FAVRGLTQTAARDLASEGITVNAYAPGIV 185 (256)
T ss_pred CCCEEEEECccccccCC-------------CCCchhHHHH---HHHHHHHHHHHHHhcccCcEEEEEeeCCC
Confidence 2589999996543 32 1136799999 6677777777654 5788888887653
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00013 Score=71.82 Aligned_cols=119 Identities=13% Similarity=0.057 Sum_probs=82.3
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCc----cccccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAV----GESMQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+..+..+.+|+.+.+.+.+.+++ .++|++||+|+.... ..+.++....++.|+.++..+++++. +.+
T Consensus 52 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 131 (246)
T PRK12938 52 GFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG 131 (246)
T ss_pred CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 34567889999999988877653 268999999987532 11334556778999999777666554 456
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.+++|++||...... .+....|+.+| ...+.+.+.+.+. .++++..++|+.+
T Consensus 132 ~~~iv~isS~~~~~~------------~~~~~~y~~sK---~a~~~~~~~l~~~~~~~gi~v~~i~pg~~ 186 (246)
T PRK12938 132 WGRIINISSVNGQKG------------QFGQTNYSTAK---AGIHGFTMSLAQEVATKGVTVNTVSPGYI 186 (246)
T ss_pred CeEEEEEechhccCC------------CCCChhHHHHH---HHHHHHHHHHHHHhhhhCeEEEEEEeccc
Confidence 679999999643211 01236799999 5566777766654 5677888887653
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00014 Score=71.81 Aligned_cols=117 Identities=15% Similarity=0.136 Sum_probs=83.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc-----
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----- 316 (600)
+..++++.+|+.+.+++.++++.. ++|+|||+|+...... ...+....++.|+.++.++++++...
T Consensus 46 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 125 (252)
T PRK07856 46 GRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQP 125 (252)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 346788999999999888877642 5799999998643221 22344577899999999999988641
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhC--CCCeeEeec
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTG--NKPVPYIFY 382 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~--~~~~~~r~~ 382 (600)
+..++|++||...+... +....|+.+| ...+.+++.++.+.+ +++..++|+
T Consensus 126 ~~g~ii~isS~~~~~~~------------~~~~~Y~~sK---~a~~~l~~~la~e~~~~i~v~~i~Pg 178 (252)
T PRK07856 126 GGGSIVNIGSVSGRRPS------------PGTAAYGAAK---AGLLNLTRSLAVEWAPKVRVNAVVVG 178 (252)
T ss_pred CCcEEEEEcccccCCCC------------CCCchhHHHH---HHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 34689999997654311 2236899999 668889988887654 444445543
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00013 Score=72.26 Aligned_cols=117 Identities=13% Similarity=0.104 Sum_probs=82.3
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcc---ccccChHHHHHHHHHHHHHHHHHHHH----cCC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG---ESMQEPLMYYKNNLIATINLLEVMKS----HGV 318 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~ 318 (600)
+..+.++.+|+++.+++.++++. .++|++||+|+..... ...++....++.|+.++.++++++.. .+.
T Consensus 59 ~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 138 (255)
T PRK06113 59 GGQAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGG 138 (255)
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCC
Confidence 34578889999999988776654 2589999999975322 12244556689999999999999873 344
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeec
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFY 382 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~ 382 (600)
.++|++||.+.... . +....|+.+| ...+.+++.++.. .++++..+.|+
T Consensus 139 ~~iv~isS~~~~~~-----------~-~~~~~Y~~sK---~a~~~~~~~la~~~~~~~i~v~~v~pg 190 (255)
T PRK06113 139 GVILTITSMAAENK-----------N-INMTSYASSK---AAASHLVRNMAFDLGEKNIRVNGIAPG 190 (255)
T ss_pred cEEEEEecccccCC-----------C-CCcchhHHHH---HHHHHHHHHHHHHhhhhCeEEEEEecc
Confidence 69999999764311 1 1236799999 6688888888754 34555555544
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00014 Score=72.04 Aligned_cols=119 Identities=14% Similarity=0.047 Sum_probs=82.9
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc-----cccChHHHHHHHHHHHHHHHHH----HHHc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEV----MKSH 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~----~~~~ 316 (600)
+..+.++.+|+.+++++.++++.. ++|++||+|+...... ..++....+++|+.++..+..+ +++.
T Consensus 54 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~ 133 (254)
T PRK07478 54 GGEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR 133 (254)
T ss_pred CCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 345788999999999888877642 6899999998743211 2234567789999887766554 4445
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
+..++|++||...+... .+....|+.|| ...+.+++.++.+. ++++..+.|+.
T Consensus 134 ~~~~iv~~sS~~~~~~~-----------~~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~PG~ 189 (254)
T PRK07478 134 GGGSLIFTSTFVGHTAG-----------FPGMAAYAASK---AGLIGLTQVLAAEYGAQGIRVNALLPGG 189 (254)
T ss_pred CCceEEEEechHhhccC-----------CCCcchhHHHH---HHHHHHHHHHHHHHhhcCEEEEEEeeCc
Confidence 56789999997655311 11236899999 66778888777654 57777777654
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00017 Score=71.91 Aligned_cols=117 Identities=12% Similarity=0.027 Sum_probs=83.7
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHH-----c
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS-----H 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~-----~ 316 (600)
+.++.++.+|+++.+++.++++.. ++|+|||+|+..... ...++....+..|+.++.++++++.. .
T Consensus 58 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 137 (263)
T PRK07814 58 GRRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHS 137 (263)
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhc
Confidence 456888999999999988776642 689999999864322 22345677889999999999999874 3
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhC--CCCeeEeec
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTG--NKPVPYIFY 382 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~--~~~~~~r~~ 382 (600)
+.+++|++||..-... .+....|+.+| ...+.+++.+..+.. +++..++|+
T Consensus 138 ~~g~iv~~sS~~~~~~------------~~~~~~Y~~sK---~a~~~~~~~~~~e~~~~i~v~~i~Pg 190 (263)
T PRK07814 138 GGGSVINISSTMGRLA------------GRGFAAYGTAK---AALAHYTRLAALDLCPRIRVNAIAPG 190 (263)
T ss_pred CCeEEEEEccccccCC------------CCCCchhHHHH---HHHHHHHHHHHHHHCCCceEEEEEeC
Confidence 4578999999532211 11236899999 667888888887643 444455543
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00013 Score=71.41 Aligned_cols=118 Identities=14% Similarity=0.021 Sum_probs=84.3
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHHc---CCC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSH---GVY 319 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~---~~~ 319 (600)
.+++++.+|+.+..++.+.++.. ++|+|||+++..... ...++....++.|+.++.++++++.+. +.+
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 133 (237)
T PRK07326 54 GNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGG 133 (237)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCe
Confidence 46889999999999888877642 689999999865432 122344567899999999998888643 456
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHH---HhCCCCeeEeeccc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER---VTGNKPVPYIFYNL 384 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~---~~~~~~~~~r~~~~ 384 (600)
++|++||...+... +....|+.+| ...+.+.+.+.. ..+++++.+||+.+
T Consensus 134 ~iv~~ss~~~~~~~------------~~~~~y~~sk---~a~~~~~~~~~~~~~~~gi~v~~v~pg~~ 186 (237)
T PRK07326 134 YIINISSLAGTNFF------------AGGAAYNASK---FGLVGFSEAAMLDLRQYGIKVSTIMPGSV 186 (237)
T ss_pred EEEEECChhhccCC------------CCCchHHHHH---HHHHHHHHHHHHHhcccCcEEEEEeeccc
Confidence 89999997654311 1135799999 555666666643 35888999987653
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=9.6e-05 Score=72.61 Aligned_cols=119 Identities=13% Similarity=0.079 Sum_probs=84.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..+.++.+|+.+++++.++++.. ++|+|||+++...... ..++....++.|+.++.++++++.. .+
T Consensus 54 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 133 (247)
T PRK05565 54 GGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK 133 (247)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 446889999999999888877642 6899999998753221 2234467789999998888887764 34
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.+++|++||...+... +....|+.+| ...+.+++.+... .+++++.+||+.+
T Consensus 134 ~~~~v~~sS~~~~~~~------------~~~~~y~~sK---~a~~~~~~~~~~~~~~~gi~~~~v~pg~v 188 (247)
T PRK05565 134 SGVIVNISSIWGLIGA------------SCEVLYSASK---GAVNAFTKALAKELAPSGIRVNAVAPGAI 188 (247)
T ss_pred CcEEEEECCHhhccCC------------CCccHHHHHH---HHHHHHHHHHHHHHHHcCeEEEEEEECCc
Confidence 5789999996554321 1125799999 5556666665543 4788888887654
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00013 Score=72.67 Aligned_cols=117 Identities=12% Similarity=0.057 Sum_probs=84.4
Q ss_pred ceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcc-------------ccccChHHHHHHHHHHHHHHHHHHH
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG-------------ESMQEPLMYYKNNLIATINLLEVMK 314 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~-------------~~~~~~~~~~~~Nv~gt~~ll~~~~ 314 (600)
.+.++.+|+.+++++.++++. .++|++||+|+..... ...++....++.|+.++..+++++.
T Consensus 50 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 129 (266)
T PRK06171 50 NYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVA 129 (266)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHH
Confidence 567889999999988887664 2589999999864321 1223445678999999999998887
Q ss_pred Hc----CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 315 SH----GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 315 ~~----~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.+ +..++|++||...+... +....|+.+| ...+.+++.++.+ +++++..++|+.+
T Consensus 130 ~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~l~~~la~e~~~~gi~v~~v~pG~~ 191 (266)
T PRK06171 130 RQMVKQHDGVIVNMSSEAGLEGS------------EGQSCYAATK---AALNSFTRSWAKELGKHNIRVVGVAPGIL 191 (266)
T ss_pred HHHHhcCCcEEEEEccccccCCC------------CCCchhHHHH---HHHHHHHHHHHHHhhhcCeEEEEEecccc
Confidence 53 34589999997654321 1136899999 6678888887765 4677777776543
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=6.8e-05 Score=73.69 Aligned_cols=117 Identities=13% Similarity=-0.014 Sum_probs=82.1
Q ss_pred CCceeEEEeecCChhhHHHHhhc---------CCccEEEEcccccCccc-----cccChHHHHHHHHHHHHHHHHHHHH-
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK---------HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKS- 315 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~---------~~~d~VihlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~~~~- 315 (600)
+.++.++.+|+.+.+++.+++.. .++|.+||+|+...... ..++....++.|+.++..+++.+.+
T Consensus 44 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 123 (243)
T PRK07023 44 GERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQA 123 (243)
T ss_pred CCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHH
Confidence 44688899999999988885443 25789999998753211 1234466788999997776666553
Q ss_pred ---cCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH--hCCCCeeEeec
Q psy16545 316 ---HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV--TGNKPVPYIFY 382 (600)
Q Consensus 316 ---~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~--~~~~~~~~r~~ 382 (600)
.+.+++|++||...+... +....|+.+| ...|.+++.+... .++++..++|+
T Consensus 124 ~~~~~~~~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~~~~~~~~~i~v~~v~pg 180 (243)
T PRK07023 124 ASDAAERRILHISSGAARNAY------------AGWSVYCATK---AALDHHARAVALDANRALRIVSLAPG 180 (243)
T ss_pred hhccCCCEEEEEeChhhcCCC------------CCchHHHHHH---HHHHHHHHHHHhcCCCCcEEEEecCC
Confidence 345799999998766421 1236899999 7789999988865 35666666554
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00014 Score=71.53 Aligned_cols=119 Identities=13% Similarity=0.092 Sum_probs=82.3
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc-----cccChHHHHHHHHHHHHHHHHHHHH-cCC-
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKS-HGV- 318 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~~~~-~~~- 318 (600)
+..+.++.+|+.+..++.++++.. ++|++||+|+...... ..++....+..|+.++..+++++.+ ...
T Consensus 51 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 130 (248)
T PRK06947 51 GGRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTD 130 (248)
T ss_pred CCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc
Confidence 346889999999999888776542 5899999998653222 2233456689999999888765443 221
Q ss_pred -----CEEEEecCcc-cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 319 -----YQLVFSSSCT-VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 319 -----~r~v~~SS~~-vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
.++|++||.+ ++|... . ...|+.+| ...+.+++.++... +++++.+||+.+
T Consensus 131 ~~~~~~~ii~~sS~~~~~~~~~-----------~-~~~Y~~sK---~~~~~~~~~la~~~~~~~i~v~~i~Pg~v 190 (248)
T PRK06947 131 RGGRGGAIVNVSSIASRLGSPN-----------E-YVDYAGSK---GAVDTLTLGLAKELGPHGVRVNAVRPGLI 190 (248)
T ss_pred CCCCCcEEEEECchhhcCCCCC-----------C-CcccHhhH---HHHHHHHHHHHHHhhhhCcEEEEEeccCc
Confidence 3699999965 344211 1 14699999 66777777776653 788999998754
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0002 Score=70.47 Aligned_cols=119 Identities=24% Similarity=0.229 Sum_probs=84.2
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+..++++.+|+++.+++.++++.. ++|++||+|+...... ........+++|+.++.++++++. +.+
T Consensus 52 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 131 (248)
T PRK08251 52 GIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG 131 (248)
T ss_pred CceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 346889999999999888776642 5899999998754322 123345678899999988888775 446
Q ss_pred CCEEEEecCccc-ccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTV-YGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~v-Yg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
..++|++||... +|.. .+ ...|+.|| ...+.+.+.+..+ .+++++.++|+.+
T Consensus 132 ~~~iv~~sS~~~~~~~~-----------~~-~~~Y~~sK---~a~~~~~~~l~~~~~~~~i~v~~v~pg~v 187 (248)
T PRK08251 132 SGHLVLISSVSAVRGLP-----------GV-KAAYAASK---AGVASLGEGLRAELAKTPIKVSTIEPGYI 187 (248)
T ss_pred CCeEEEEeccccccCCC-----------CC-cccHHHHH---HHHHHHHHHHHHHhcccCcEEEEEecCcC
Confidence 679999999654 3321 11 26799999 5567777777654 3577777776553
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00027 Score=69.92 Aligned_cols=115 Identities=18% Similarity=0.103 Sum_probs=79.3
Q ss_pred ceeEEEeecCChhhHHHHhhc------CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHH----HHHHHHcCC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAK------HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINL----LEVMKSHGV 318 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~------~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~l----l~~~~~~~~ 318 (600)
+++++.+|+.+.+++.+.++. ..++.++|+|+...... ...+....++.|+.++.++ ++.+++.+.
T Consensus 46 ~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~ 125 (256)
T PRK08017 46 GFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGE 125 (256)
T ss_pred CCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC
Confidence 478889999998877665543 25789999998643211 2234457789999988775 666666777
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHH---HHhCCCCeeEeec
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFE---RVTGNKPVPYIFY 382 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~---~~~~~~~~~~r~~ 382 (600)
+++|++||...+.. .+....|+.+| ...|.+.+.+. ...++++++++|+
T Consensus 126 ~~iv~~ss~~~~~~------------~~~~~~Y~~sK---~~~~~~~~~l~~~~~~~~i~v~~v~pg 177 (256)
T PRK08017 126 GRIVMTSSVMGLIS------------TPGRGAYAASK---YALEAWSDALRMELRHSGIKVSLIEPG 177 (256)
T ss_pred CEEEEEcCcccccC------------CCCccHHHHHH---HHHHHHHHHHHHHHhhcCCEEEEEeCC
Confidence 89999999643321 11236799999 55677665543 3457888888864
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00019 Score=70.89 Aligned_cols=118 Identities=14% Similarity=0.228 Sum_probs=83.0
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc-----cccccChHHHHHHHHHHHHHHHHHHH----Hc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMK----SH 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~----~~ 316 (600)
+..+.++.+|+.+.+++..+++.. ++|++||+|+.... ....++....++.|+.++..+++++. +.
T Consensus 56 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 135 (252)
T PRK07035 56 GGKAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQ 135 (252)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC
Confidence 345788999999999887766642 58999999985321 12223445678899999988877764 44
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
+.+++|++||...+.. .+....|+.|| ...+.+++.+..+. ++++..+.|+.
T Consensus 136 ~~~~iv~~sS~~~~~~------------~~~~~~Y~~sK---~al~~~~~~l~~e~~~~gi~v~~i~PG~ 190 (252)
T PRK07035 136 GGGSIVNVASVNGVSP------------GDFQGIYSITK---AAVISMTKAFAKECAPFGIRVNALLPGL 190 (252)
T ss_pred CCcEEEEECchhhcCC------------CCCCcchHHHH---HHHHHHHHHHHHHHhhcCEEEEEEeecc
Confidence 5679999999644321 12236899999 67888888887653 67777777654
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=8.1e-05 Score=75.62 Aligned_cols=163 Identities=15% Similarity=0.054 Sum_probs=106.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccccc--c---cccChHHhhhHHh--hhhc-ccccccCCCCEEEEcCcccCc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE--G---DIVSMYANTDLAQ--KELG-WSARCTHDIDCVIHFAAVKAV 79 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~--~---Dl~~~~~~~~~~~--~~~~-~~~~~~~~~d~Vih~A~~~~~ 79 (600)
.|+|++|.+|..++......+..-+++.+|+.. + |+.+...-..... +..+ ++.+. ++|+||++||....
T Consensus 12 ~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~--gaDvVVitaG~~~~ 89 (321)
T PTZ00325 12 AVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALR--GADLVLICAGVPRK 89 (321)
T ss_pred EEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhC--CCCEEEECCCCCCC
Confidence 588998999999876544323333555555532 1 4332111000000 0001 22454 89999999998642
Q ss_pred ccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCC--CCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q psy16545 80 GESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL--PITEDHPTGNIKNVYGKTKHFIEEMLKDLS 157 (600)
Q Consensus 80 ~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~--~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~ 157 (600)
........+..|+..+.++++++++++++++|+++|..+-....-. .+.+.... +|...||.+-+..-++-..++
T Consensus 90 --~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~-p~~~viG~g~LDs~R~r~~la 166 (321)
T PTZ00325 90 --PGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVY-DPRKLFGVTTLDVVRARKFVA 166 (321)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCC-ChhheeechhHHHHHHHHHHH
Confidence 2245677899999999999999999999999999997664322100 12244555 677788887677677777777
Q ss_pred hhcCCceEEEEecccccCCC
Q psy16545 158 KAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 158 ~~~~~~~~~ilR~~~v~G~~ 177 (600)
+.. ++....++ +.|+|.|
T Consensus 167 ~~l-~v~~~~V~-~~VlGeH 184 (321)
T PTZ00325 167 EAL-GMNPYDVN-VPVVGGH 184 (321)
T ss_pred HHh-CcChhheE-EEEEeec
Confidence 765 88888888 8999987
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00023 Score=70.80 Aligned_cols=118 Identities=18% Similarity=0.172 Sum_probs=83.5
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc---cccccChHHHHHHHHHHHHHHHHHHHHc---CCC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV---GESMQEPLMYYKNNLIATINLLEVMKSH---GVY 319 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~---~~~~~~~~~~~~~Nv~gt~~ll~~~~~~---~~~ 319 (600)
+..+.++.+|+.+.+++.++++.. .+|++||+|+.... ....++....++.|+.++..+++++... +-.
T Consensus 51 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g 130 (261)
T PRK08265 51 GERARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGG 130 (261)
T ss_pred CCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCc
Confidence 556889999999999888877642 58999999986432 1233455677889999999998877642 336
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
++|++||.+..-.. +....|+.+| ...+.+.+.++.+ +++++..++|+.
T Consensus 131 ~ii~isS~~~~~~~------------~~~~~Y~asK---aa~~~~~~~la~e~~~~gi~vn~v~PG~ 182 (261)
T PRK08265 131 AIVNFTSISAKFAQ------------TGRWLYPASK---AAIRQLTRSMAMDLAPDGIRVNSVSPGW 182 (261)
T ss_pred EEEEECchhhccCC------------CCCchhHHHH---HHHHHHHHHHHHHhcccCEEEEEEccCC
Confidence 89999996543211 1135799999 5677777777755 367777776543
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.78 E-value=8.3e-05 Score=75.63 Aligned_cols=163 Identities=15% Similarity=0.024 Sum_probs=107.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccccc-----ccccChHHhhhHHh--hhhc-ccccccCCCCEEEEcCcccCc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE-----GDIVSMYANTDLAQ--KELG-WSARCTHDIDCVIHFAAVKAV 79 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~-----~Dl~~~~~~~~~~~--~~~~-~~~~~~~~~d~Vih~A~~~~~ 79 (600)
.|+|++|.+|..++-.....+..-+++.+|+++ .|+.+......+.. ...+ ++.+. ++|+|||+||....
T Consensus 22 ~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~--~aDiVVitAG~~~~ 99 (323)
T PLN00106 22 AVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALK--GADLVIIPAGVPRK 99 (323)
T ss_pred EEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcC--CCCEEEEeCCCCCC
Confidence 478999999999977554333222455455543 24332211101000 0001 22454 89999999998643
Q ss_pred ccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCC--CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q psy16545 80 GESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP--QFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLS 157 (600)
Q Consensus 80 ~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~--~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~ 157 (600)
+ .......+..|+..+.++++++.+.+..++|+++|.-+-+.. -...+...... +|...||.+++..+++-..++
T Consensus 100 ~--g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~-p~~~viG~~~LDs~Rl~~~lA 176 (323)
T PLN00106 100 P--GMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVY-DPKKLFGVTTLDVVRANTFVA 176 (323)
T ss_pred C--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCC-CcceEEEEecchHHHHHHHHH
Confidence 2 245677899999999999999999999899999996432100 00011233455 677889999999999888888
Q ss_pred hhcCCceEEEEecccccCCC
Q psy16545 158 KAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 158 ~~~~~~~~~ilR~~~v~G~~ 177 (600)
++. +++...++ +.|+|.+
T Consensus 177 ~~l-gv~~~~V~-~~ViGeH 194 (323)
T PLN00106 177 EKK-GLDPADVD-VPVVGGH 194 (323)
T ss_pred HHh-CCChhheE-EEEEEeC
Confidence 887 88888886 6888876
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00018 Score=71.13 Aligned_cols=117 Identities=19% Similarity=0.180 Sum_probs=81.9
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..+.++.+|+++++++.++++.. .+|++||+|+...... ...+....++.|+.++..+++++.. .+
T Consensus 48 ~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 127 (254)
T TIGR02415 48 GGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQG 127 (254)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC
Confidence 446788999999999888876542 5799999998753321 2234456789999999887776653 23
Q ss_pred -CCEEEEecCcc-cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 318 -VYQLVFSSSCT-VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 318 -~~r~v~~SS~~-vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
.+++|++||.. ++|. +....|+.+| ...+.+++.+.... ++++..++|+.
T Consensus 128 ~~~~iv~~sS~~~~~~~-------------~~~~~Y~~sK---~a~~~~~~~l~~~~~~~~i~v~~v~Pg~ 182 (254)
T TIGR02415 128 HGGKIINAASIAGHEGN-------------PILSAYSSTK---FAVRGLTQTAAQELAPKGITVNAYCPGI 182 (254)
T ss_pred CCeEEEEecchhhcCCC-------------CCCcchHHHH---HHHHHHHHHHHHHhcccCeEEEEEecCc
Confidence 26899999954 3432 1236899999 66788888777654 56666666543
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00015 Score=71.85 Aligned_cols=119 Identities=13% Similarity=0.040 Sum_probs=83.8
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCc----cccccChHHHHHHHHHHHHHHHHHHHHc--CCC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAV----GESMQEPLMYYKNNLIATINLLEVMKSH--GVY 319 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~ 319 (600)
+..+.++.+|+++.+++.++++. .++|++||+|+.... ..+.++....++.|+.++..+++++... ...
T Consensus 60 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~ 139 (257)
T PRK12744 60 GAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNG 139 (257)
T ss_pred CCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC
Confidence 44678899999999998887764 268999999997432 2233455677899999999999998754 124
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
++++++|+.+... .+....|+.|| ...|.+++.++.+. +++++.++|+.+
T Consensus 140 ~iv~~~ss~~~~~------------~~~~~~Y~~sK---~a~~~~~~~la~e~~~~~i~v~~v~pg~v 192 (257)
T PRK12744 140 KIVTLVTSLLGAF------------TPFYSAYAGSK---APVEHFTRAASKEFGARGISVTAVGPGPM 192 (257)
T ss_pred CEEEEecchhccc------------CCCcccchhhH---HHHHHHHHHHHHHhCcCceEEEEEecCcc
Confidence 6666533322211 01236799999 67899999998764 577777776654
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00025 Score=70.09 Aligned_cols=118 Identities=12% Similarity=-0.012 Sum_probs=81.8
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----------CCccEEEEcccccCcccc----ccChHHHHHHHHHHHHHHHHHHHH
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----------HDIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMKS 315 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----------~~~d~VihlAa~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~~~~ 315 (600)
+..+..+.+|+.+.+++...++. .++|++||+|+....... .++....+++|+.++..+++++..
T Consensus 53 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 132 (252)
T PRK12747 53 GGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALS 132 (252)
T ss_pred CCceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 34567788999998766654432 168999999996432211 122356778999999999988775
Q ss_pred c--CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 316 H--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 316 ~--~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
. ...++|++||.+.+... +....|+.|| ...+.+++.++.+. ++++..+.|+.
T Consensus 133 ~~~~~g~iv~isS~~~~~~~------------~~~~~Y~~sK---aa~~~~~~~la~e~~~~girvn~v~Pg~ 190 (252)
T PRK12747 133 RLRDNSRIINISSAATRISL------------PDFIAYSMTK---GAINTMTFTLAKQLGARGITVNAILPGF 190 (252)
T ss_pred HhhcCCeEEEECCcccccCC------------CCchhHHHHH---HHHHHHHHHHHHHHhHcCCEEEEEecCC
Confidence 4 23599999998765321 1236799999 66788888777653 67777777654
|
|
| >KOG1014|consensus | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00018 Score=70.66 Aligned_cols=149 Identities=14% Similarity=0.093 Sum_probs=103.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccCh----HHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSM----YANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~----~~~~~~~~~~~~~~~ 61 (600)
-|||++.-+|++.+. +++..++.++.++|+ ..|.++. +.+++ .
T Consensus 53 VVTGaTDGIGKayA~--eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~---------~ 121 (312)
T KOG1014|consen 53 VVTGATDGIGKAYAR--ELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLE---------K 121 (312)
T ss_pred EEECCCCcchHHHHH--HHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHH---------H
Confidence 378999999988844 333334444444444 3455544 34555 5
Q ss_pred cccCCCCEEEEcCcccCc-ccC-----CCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCC
Q psy16545 62 RCTHDIDCVIHFAAVKAV-GES-----MQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITE 131 (600)
Q Consensus 62 ~~~~~~d~Vih~A~~~~~-~~~-----~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E 131 (600)
+.+..+-++|||+|+... +.. ....+....+|+.++..+.+... +.+-+-+|++||.+.-
T Consensus 122 l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~---------- 191 (312)
T KOG1014|consen 122 LAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL---------- 191 (312)
T ss_pred hcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc----------
Confidence 665568899999999752 111 12345678899999888877753 3344569999997421
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhhcC--CceEEEEecccccCCCCC
Q psy16545 132 DHPTGNIKNVYGKTKHFIEEMLKDLSKAHK--EWNIISLRYFNPVGAHPS 179 (600)
Q Consensus 132 ~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~--~~~~~ilR~~~v~G~~~~ 179 (600)
.|. +.++.|+.||...+...+.+.+++. |+.+..+-|..|.++...
T Consensus 192 -~p~-p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~ 239 (312)
T KOG1014|consen 192 -IPT-PLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAK 239 (312)
T ss_pred -ccC-hhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccc
Confidence 133 5678999999999999999988873 899999999999998643
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00017 Score=71.48 Aligned_cols=119 Identities=13% Similarity=0.107 Sum_probs=85.6
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
+..++++.+|+++.+++..+++. .++|++||+|+..... ...++....+..|+.++.++++++... +
T Consensus 51 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 130 (256)
T PRK12743 51 GVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQG 130 (256)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 45688999999999988777664 2589999999875422 122455677899999999999987753 1
Q ss_pred -CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 -VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 -~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
-+++|++||.... .+..+ ...|+.+| ...+.+++.++.. .+++++.++|+.+
T Consensus 131 ~~g~ii~isS~~~~-----------~~~~~-~~~Y~~sK---~a~~~l~~~la~~~~~~~i~v~~v~Pg~~ 186 (256)
T PRK12743 131 QGGRIINITSVHEH-----------TPLPG-ASAYTAAK---HALGGLTKAMALELVEHGILVNAVAPGAI 186 (256)
T ss_pred CCeEEEEEeecccc-----------CCCCC-cchhHHHH---HHHHHHHHHHHHHhhhhCeEEEEEEeCCc
Confidence 2589999996422 11112 36899999 6677888777754 4788888887653
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.0002 Score=70.57 Aligned_cols=114 Identities=14% Similarity=0.095 Sum_probs=80.4
Q ss_pred eeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHH----HHHHHHHHHHHcCCCE
Q psy16545 254 VDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLI----ATINLLEVMKSHGVYQ 320 (600)
Q Consensus 254 v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~----gt~~ll~~~~~~~~~r 320 (600)
+.++.+|+.+.+++.++++. .++|++||+|+...... ...+....++.|+. ++..++.++++.+.++
T Consensus 53 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 132 (251)
T PRK07069 53 AFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPAS 132 (251)
T ss_pred EEEEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcE
Confidence 45678999999988877654 25899999998754322 12234556778887 7788888888777789
Q ss_pred EEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh-----CCCCeeEeec
Q psy16545 321 LVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT-----GNKPVPYIFY 382 (600)
Q Consensus 321 ~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~-----~~~~~~~r~~ 382 (600)
+|++||...+.... ....|+.+| ...+.+++.++... ++++..++|+
T Consensus 133 ii~~ss~~~~~~~~------------~~~~Y~~sK---~a~~~~~~~la~e~~~~~~~i~v~~v~pg 184 (251)
T PRK07069 133 IVNISSVAAFKAEP------------DYTAYNASK---AAVASLTKSIALDCARRGLDVRCNSIHPT 184 (251)
T ss_pred EEEecChhhccCCC------------CCchhHHHH---HHHHHHHHHHHHHhcccCCcEEEEEEeec
Confidence 99999987765321 135799999 66788888777653 2445555544
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0002 Score=70.85 Aligned_cols=118 Identities=14% Similarity=0.018 Sum_probs=82.1
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc----cccccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV----GESMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..+.++.+|+++++++.++++.. ++|++||+|+.... ..+.++....++.|+.++.++++++.+ .+
T Consensus 49 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 128 (252)
T PRK07677 49 PGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKG 128 (252)
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC
Confidence 346889999999999888876642 58999999985322 112234466899999999999998853 22
Q ss_pred -CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH----hCCCCeeEeecc
Q psy16545 318 -VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV----TGNKPVPYIFYN 383 (600)
Q Consensus 318 -~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~----~~~~~~~~r~~~ 383 (600)
-.++|++||..-+... +....|+.+| ...+.+.+.++.. +|+++..++|+.
T Consensus 129 ~~g~ii~isS~~~~~~~------------~~~~~Y~~sK---aa~~~~~~~la~e~~~~~gi~v~~v~PG~ 184 (252)
T PRK07677 129 IKGNIINMVATYAWDAG------------PGVIHSAAAK---AGVLAMTRTLAVEWGRKYGIRVNAIAPGP 184 (252)
T ss_pred CCEEEEEEcChhhccCC------------CCCcchHHHH---HHHHHHHHHHHHHhCcccCeEEEEEeecc
Confidence 2589999987533210 1135799999 5567777766554 467777777654
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00018 Score=71.13 Aligned_cols=119 Identities=15% Similarity=0.150 Sum_probs=86.1
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..+.++.+|+++.+++.++++. .++|++||+|+...... ..++....+++|+.++..+.+++.. .+
T Consensus 54 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~ 133 (251)
T PRK12481 54 GRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQG 133 (251)
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcC
Confidence 45688999999999999888764 25899999998753221 2245566788999999888887654 22
Q ss_pred -CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 -VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 -~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
-.++|++||...+.... ....|+.|| ...+.+.+.++.+ +|+++..+.|+.+
T Consensus 134 ~~g~ii~isS~~~~~~~~------------~~~~Y~asK---~a~~~l~~~la~e~~~~girvn~v~PG~v 189 (251)
T PRK12481 134 NGGKIINIASMLSFQGGI------------RVPSYTASK---SAVMGLTRALATELSQYNINVNAIAPGYM 189 (251)
T ss_pred CCCEEEEeCChhhcCCCC------------CCcchHHHH---HHHHHHHHHHHHHHhhcCeEEEEEecCCC
Confidence 25899999987664211 125799999 6677888777764 5777777776543
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00029 Score=69.12 Aligned_cols=117 Identities=14% Similarity=0.070 Sum_probs=84.9
Q ss_pred CceeEEEeecCChhhHHHHhhcC--CccEEEEcccccCc-cc---cccChHHHHHHHHHHHHHHHHHHHHc--CCCEEEE
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH--DIDCVIHFAAVKAV-GE---SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVF 323 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~--~~d~VihlAa~~~~-~~---~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~r~v~ 323 (600)
.++.++.+|+++.+++.++++.. .+|.++|.|+.... .. ..++....++.|+.++.++++++..+ +-+++|+
T Consensus 46 ~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~ 125 (240)
T PRK06101 46 ANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVI 125 (240)
T ss_pred CCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEE
Confidence 45788999999999999988753 36889999875421 11 12234567999999999999998863 2358999
Q ss_pred ecCcc-cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHH---HhCCCCeeEeeccc
Q psy16545 324 SSSCT-VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER---VTGNKPVPYIFYNL 384 (600)
Q Consensus 324 ~SS~~-vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~---~~~~~~~~~r~~~~ 384 (600)
+||.. .++. +....|+.+| ...+.+.+.+.. .++++++.++|+.+
T Consensus 126 isS~~~~~~~-------------~~~~~Y~asK---~a~~~~~~~l~~e~~~~gi~v~~v~pg~i 174 (240)
T PRK06101 126 VGSIASELAL-------------PRAEAYGASK---AAVAYFARTLQLDLRPKGIEVVTVFPGFV 174 (240)
T ss_pred EechhhccCC-------------CCCchhhHHH---HHHHHHHHHHHHHHHhcCceEEEEeCCcC
Confidence 88854 3321 2236799999 667888877763 45888999998764
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00029 Score=70.12 Aligned_cols=119 Identities=15% Similarity=0.115 Sum_probs=83.9
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcccc----ccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..+.++.+|+.+.+++.++++.. ++|++||+|+....... ..+....++.|+.++.++++++.. .+
T Consensus 53 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 132 (263)
T PRK08226 53 GHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK 132 (263)
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Confidence 345788999999999888877642 68999999997543222 223445688999999999988764 34
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
..++|++||...... ..+....|+.+| ...+.+++.++... ++++..++|+.
T Consensus 133 ~~~iv~isS~~~~~~-----------~~~~~~~Y~~sK---~a~~~~~~~la~~~~~~~i~v~~i~pg~ 187 (263)
T PRK08226 133 DGRIVMMSSVTGDMV-----------ADPGETAYALTK---AAIVGLTKSLAVEYAQSGIRVNAICPGY 187 (263)
T ss_pred CcEEEEECcHHhccc-----------CCCCcchHHHHH---HHHHHHHHHHHHHhcccCcEEEEEecCc
Confidence 568999999643110 012236799999 66788888887654 67777777654
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00025 Score=69.21 Aligned_cols=117 Identities=13% Similarity=0.099 Sum_probs=83.2
Q ss_pred eeEEEeecCChhhHHHHhhcC-CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEecC
Q psy16545 254 VDFYSCDLVDKNRLGEIFAKH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSS 326 (600)
Q Consensus 254 v~~i~~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~r~v~~SS 326 (600)
++++.+|+++.+.+.+.++.. ++|++||+|+...... ..++....++.|+.++..++..+... ...++|++||
T Consensus 53 ~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 132 (237)
T PRK12742 53 ATAVQTDSADRDAVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGS 132 (237)
T ss_pred CeEEecCCCCHHHHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 567889999998888877653 4899999998753222 23455778999999999998766654 3469999999
Q ss_pred cccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 327 CTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 327 ~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.... ..+. +....|+.+| ...|.+++.++.. .++++..++|+.+
T Consensus 133 ~~~~----------~~~~-~~~~~Y~~sK---aa~~~~~~~la~~~~~~gi~v~~v~Pg~~ 179 (237)
T PRK12742 133 VNGD----------RMPV-AGMAAYAASK---SALQGMARGLARDFGPRGITINVVQPGPI 179 (237)
T ss_pred cccc----------cCCC-CCCcchHHhH---HHHHHHHHHHHHHHhhhCeEEEEEecCcc
Confidence 6431 1111 2247899999 6678888877764 4677778877543
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00014 Score=72.17 Aligned_cols=118 Identities=17% Similarity=0.092 Sum_probs=84.8
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
+..+.++.+|+.+++++.++++.. ++|.+||+|+...... ........++.|+.++.++++++.+. +
T Consensus 55 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 134 (260)
T PRK06198 55 GAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRK 134 (260)
T ss_pred CCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 446788999999999888877642 5899999998753221 22333566899999999998887642 2
Q ss_pred -CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 318 -VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 318 -~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
..++|++||...++... ....|+.+| ...|.+++.+.... +++++.++|+.
T Consensus 135 ~~g~iv~~ss~~~~~~~~------------~~~~Y~~sK---~a~~~~~~~~a~e~~~~~i~v~~i~pg~ 189 (260)
T PRK06198 135 AEGTIVNIGSMSAHGGQP------------FLAAYCASK---GALATLTRNAAYALLRNRIRVNGLNIGW 189 (260)
T ss_pred CCCEEEEECCcccccCCC------------CcchhHHHH---HHHHHHHHHHHHHhcccCeEEEEEeecc
Confidence 25799999988775321 136799999 66788888877654 46666666654
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00033 Score=68.50 Aligned_cols=118 Identities=11% Similarity=0.042 Sum_probs=83.7
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHH-----Hc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK-----SH 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~-----~~ 316 (600)
+.++.++.+|+.+.+++.++++. .++|.+||.|+..... ....++...++.|+.++.++++++. +.
T Consensus 47 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 126 (239)
T TIGR01831 47 GGNARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR 126 (239)
T ss_pred CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc
Confidence 45688999999999988877653 2579999999864322 2344567789999999999988763 23
Q ss_pred CCCEEEEecCcc-cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCT-VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~-vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+.+++|++||.+ +++.. ....|+.+| ...+.+.+.++.. .+++++.++|+.+
T Consensus 127 ~~~~iv~vsS~~~~~~~~-------------~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 182 (239)
T TIGR01831 127 QGGRIITLASVSGVMGNR-------------GQVNYSAAK---AGLIGATKALAVELAKRKITVNCIAPGLI 182 (239)
T ss_pred CCeEEEEEcchhhccCCC-------------CCcchHHHH---HHHHHHHHHHHHHHhHhCeEEEEEEEccC
Confidence 446899999964 44421 135799999 5566666666544 4788887877653
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >KOG3019|consensus | Back alignment and domain information |
|---|
Probab=97.71 E-value=2e-05 Score=73.07 Aligned_cols=148 Identities=10% Similarity=-0.011 Sum_probs=95.2
Q ss_pred CCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHcC--CCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHG--VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+++.+++++...... +..-..+...+.+..|..|+++..+.. .+.+|.+|..++|-......++|+.+- ....
T Consensus 74 c~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~-qgfd 152 (315)
T KOG3019|consen 74 CVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVH-QGFD 152 (315)
T ss_pred hHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccccccccccccc-CChH
Confidence 556666666543211 111122345556667888889888763 467999999999987666778888887 5555
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDG 220 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~ 220 (600)
....-.+..|.......+ ..+.+++|.|.|.|.+. |.+..++..|.- |.+.| .|+|+|++.|
T Consensus 153 ~~srL~l~WE~aA~~~~~---~~r~~~iR~GvVlG~gG---------Ga~~~M~lpF~~---g~GGP---lGsG~Q~fpW 214 (315)
T KOG3019|consen 153 ILSRLCLEWEGAALKANK---DVRVALIRIGVVLGKGG---------GALAMMILPFQM---GAGGP---LGSGQQWFPW 214 (315)
T ss_pred HHHHHHHHHHHHhhccCc---ceeEEEEEEeEEEecCC---------cchhhhhhhhhh---ccCCc---CCCCCeeeee
Confidence 544434444444433322 58999999999999952 223334444433 33344 6999999999
Q ss_pred cceEEeeeccccc
Q psy16545 221 TGKVVAIDNFVNS 233 (600)
Q Consensus 221 ~~v~d~v~~~~~a 233 (600)
+|+.|.+.-+..+
T Consensus 215 IHv~DL~~li~~a 227 (315)
T KOG3019|consen 215 IHVDDLVNLIYEA 227 (315)
T ss_pred eehHHHHHHHHHH
Confidence 9999977644433
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00037 Score=68.40 Aligned_cols=119 Identities=14% Similarity=0.088 Sum_probs=84.2
Q ss_pred CCceeEEEeecCChhhHHHHhhcC--CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCCCE
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH--DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQ 320 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~--~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~r 320 (600)
+.+++++.+|+.+..++.++++.. ++|.+||+++...... ..+++...++.|+.++.++++++.. .+.++
T Consensus 50 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 129 (243)
T PRK07102 50 AVAVSTHELDILDTASHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGT 129 (243)
T ss_pred CCeEEEEecCCCChHHHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCE
Confidence 457899999999999888877642 4799999998643322 2334456789999999999988764 35679
Q ss_pred EEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHH---HhCCCCeeEeeccc
Q psy16545 321 LVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER---VTGNKPVPYIFYNL 384 (600)
Q Consensus 321 ~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~---~~~~~~~~~r~~~~ 384 (600)
+|++||...... .+....|+.+| ...+.+.+.++. ..++++..++|+.+
T Consensus 130 iv~~sS~~~~~~------------~~~~~~Y~~sK---~a~~~~~~~l~~el~~~gi~v~~v~pg~v 181 (243)
T PRK07102 130 IVGISSVAGDRG------------RASNYVYGSAK---AALTAFLSGLRNRLFKSGVHVLTVKPGFV 181 (243)
T ss_pred EEEEecccccCC------------CCCCcccHHHH---HHHHHHHHHHHHHhhccCcEEEEEecCcc
Confidence 999999642211 01235799999 556777777654 34788888876653
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00038 Score=67.39 Aligned_cols=117 Identities=14% Similarity=0.099 Sum_probs=81.6
Q ss_pred ceeEEEeecCChhhHHHHhhc---CCccEEEEcccccCccc------cccChHHHHHHHHHHHHHHHHHHHHc---CCCE
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAK---HDIDCVIHFAAVKAVGE------SMQEPLMYYKNNLIATINLLEVMKSH---GVYQ 320 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~---~~~d~VihlAa~~~~~~------~~~~~~~~~~~Nv~gt~~ll~~~~~~---~~~r 320 (600)
+++++.+|+++.+.+.+++.. .++|.+||+++...... +.++....++.|+.++.++++++... .-.+
T Consensus 45 ~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ 124 (222)
T PRK06953 45 GAEALALDVADPASVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGV 124 (222)
T ss_pred cceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCe
Confidence 467899999999988886543 25899999998753221 34456778999999999999998752 2247
Q ss_pred EEEecCc-ccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh-CCCCeeEeec
Q psy16545 321 LVFSSSC-TVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT-GNKPVPYIFY 382 (600)
Q Consensus 321 ~v~~SS~-~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~-~~~~~~~r~~ 382 (600)
+|++||. .+++.... .+ ...|+.+| ...+.+++.+...+ +++++.++|+
T Consensus 125 iv~isS~~~~~~~~~~---------~~-~~~Y~~sK---~a~~~~~~~~~~~~~~i~v~~v~Pg 175 (222)
T PRK06953 125 LAVLSSRMGSIGDATG---------TT-GWLYRASK---AALNDALRAASLQARHATCIALHPG 175 (222)
T ss_pred EEEEcCcccccccccC---------CC-ccccHHhH---HHHHHHHHHHhhhccCcEEEEECCC
Confidence 8998885 45553111 11 14699999 66788888877654 5555555544
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00045 Score=68.03 Aligned_cols=108 Identities=15% Similarity=0.092 Sum_probs=73.3
Q ss_pred CceeEEEeecC--ChhhHHHHhhc-----CCccEEEEcccccCcc-----ccccChHHHHHHHHHHHHHHHHHHH----H
Q psy16545 252 KKVDFYSCDLV--DKNRLGEIFAK-----HDIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVMK----S 315 (600)
Q Consensus 252 ~~v~~i~~Dl~--~~~~l~~~l~~-----~~~d~VihlAa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~~~~----~ 315 (600)
..+.++.+|+. +.+.+.++++. .++|.|||+|+..... .........++.|+.++.++++++. +
T Consensus 62 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~ 141 (247)
T PRK08945 62 PQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLK 141 (247)
T ss_pred CCceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh
Confidence 45677888885 45544444332 2589999999874332 1223456788999999888888774 4
Q ss_pred cCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCC
Q psy16545 316 HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGN 374 (600)
Q Consensus 316 ~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~ 374 (600)
.+.++||++||...+... +....|+.|| ...+.+++.+......
T Consensus 142 ~~~~~iv~~ss~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~~~~~~~~ 185 (247)
T PRK08945 142 SPAASLVFTSSSVGRQGR------------ANWGAYAVSK---FATEGMMQVLADEYQG 185 (247)
T ss_pred CCCCEEEEEccHhhcCCC------------CCCcccHHHH---HHHHHHHHHHHHHhcc
Confidence 567899999997543211 1235799999 6688888888776543
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00034 Score=70.15 Aligned_cols=119 Identities=13% Similarity=0.017 Sum_probs=84.0
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcccc----ccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
+.++.++.+|+++.+++.++++.. ++|++||+|+....... .++....+++|+.++.++++++... +
T Consensus 61 ~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~ 140 (273)
T PRK08278 61 GGQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE 140 (273)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC
Confidence 456788999999999988877643 68999999997543222 2344667889999999999998743 2
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeec
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFY 382 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~ 382 (600)
-.++|++||..... ... .+....|+.|| ...|.+++.++.+. +++++.+.|+
T Consensus 141 ~g~iv~iss~~~~~---------~~~-~~~~~~Y~~sK---~a~~~~~~~la~el~~~~I~v~~i~Pg 195 (273)
T PRK08278 141 NPHILTLSPPLNLD---------PKW-FAPHTAYTMAK---YGMSLCTLGLAEEFRDDGIAVNALWPR 195 (273)
T ss_pred CCEEEEECCchhcc---------ccc-cCCcchhHHHH---HHHHHHHHHHHHHhhhcCcEEEEEeCC
Confidence 35899998853110 000 02247899999 77889999888764 5666666554
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00022 Score=70.65 Aligned_cols=118 Identities=11% Similarity=0.094 Sum_probs=85.8
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C-
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G- 317 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----~- 317 (600)
.+++++.+|+.+.+++.++++.. ++|++||+|+...... ...++...++.|+.++.++++++... .
T Consensus 58 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 137 (258)
T PRK06949 58 GAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAK 137 (258)
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCC
Confidence 45789999999999888877642 5899999999643221 12345667899999999999877631 1
Q ss_pred -------CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 -------VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 -------~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
..++|++||...+... +...+|+.+| ...+.+++.++.. .+++++.++|+.+
T Consensus 138 ~~~~~~~~g~iv~~sS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~~~~~~~i~v~~v~pG~v 199 (258)
T PRK06949 138 GAGNTKPGGRIINIASVAGLRVL------------PQIGLYCMSK---AAVVHMTRAMALEWGRHGINVNAICPGYI 199 (258)
T ss_pred cCCCCCCCeEEEEECcccccCCC------------CCccHHHHHH---HHHHHHHHHHHHHHHhcCeEEEEEeeCCC
Confidence 2589999997765321 1236799999 6678888777654 4788888888664
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00025 Score=69.44 Aligned_cols=118 Identities=14% Similarity=0.086 Sum_probs=80.6
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCc----cccccChHHHHHHHHHHHHHHHHH----HHHcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAV----GESMQEPLMYYKNNLIATINLLEV----MKSHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~----~~~~~ 317 (600)
+.++.++.+|+.++..+.++++. .++|+|||+|+.... ....+++...++.|+.++..+++. +++.+
T Consensus 49 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 128 (242)
T TIGR01829 49 GFDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG 128 (242)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 34688999999999888776653 258999999986432 112334566788999998775554 45556
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.+++|++||....... +....|+.+| ...+.+++.++.. .+++++.++|..
T Consensus 129 ~~~iv~iss~~~~~~~------------~~~~~y~~sk---~a~~~~~~~la~~~~~~~i~v~~i~pg~ 182 (242)
T TIGR01829 129 WGRIINISSVNGQKGQ------------FGQTNYSAAK---AGMIGFTKALAQEGATKGVTVNTISPGY 182 (242)
T ss_pred CcEEEEEcchhhcCCC------------CCcchhHHHH---HHHHHHHHHHHHHhhhhCeEEEEEeeCC
Confidence 7899999996432111 1135799999 5566677766543 477777777654
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00024 Score=70.56 Aligned_cols=118 Identities=14% Similarity=0.078 Sum_probs=84.0
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..+.++.+|+.+.+.+..+++. .++|++||+|+...... ..++....++.|+.++..+++++.. .+
T Consensus 57 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 136 (260)
T PRK07063 57 GARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG 136 (260)
T ss_pred CceEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC
Confidence 34578899999999888887764 26899999998643221 2234556788999999888888753 34
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
..++|++||...+... +....|+.+| ...+.+++.++.+. ++++..++|+.
T Consensus 137 ~g~iv~isS~~~~~~~------------~~~~~Y~~sK---aa~~~~~~~la~el~~~gIrvn~v~PG~ 190 (260)
T PRK07063 137 RGSIVNIASTHAFKII------------PGCFPYPVAK---HGLLGLTRALGIEYAARNVRVNAIAPGY 190 (260)
T ss_pred CeEEEEECChhhccCC------------CCchHHHHHH---HHHHHHHHHHHHHhCccCeEEEEEeeCC
Confidence 5699999997654321 1235799999 66788888887654 56666666654
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00049 Score=68.09 Aligned_cols=117 Identities=14% Similarity=0.018 Sum_probs=84.9
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHH----cCC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HGV 318 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~ 318 (600)
..+.++.+|+.+.+.+.+++.. .++|++||+|+..... ...++....++.|+.++..+++++.. .+.
T Consensus 58 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 137 (254)
T PRK08085 58 IKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQA 137 (254)
T ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 4567889999999988877654 2589999999864321 12234556789999999888887765 345
Q ss_pred CEEEEecCccc-ccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTV-YGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~v-Yg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.++|++||... ++. +....|+.+| ...+.+++.++.+ +++++..++|+.+
T Consensus 138 ~~iv~isS~~~~~~~-------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~pG~~ 191 (254)
T PRK08085 138 GKIINICSMQSELGR-------------DTITPYAASK---GAVKMLTRGMCVELARHNIQVNGIAPGYF 191 (254)
T ss_pred cEEEEEccchhccCC-------------CCCcchHHHH---HHHHHHHHHHHHHHHhhCeEEEEEEeCCC
Confidence 69999999643 221 1236799999 6678888888765 4788888887653
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0003 Score=68.64 Aligned_cols=115 Identities=15% Similarity=0.118 Sum_probs=80.4
Q ss_pred ceeEEEeecCChhhHHHHhhcC-CccEEEEcccccCc-----cccccChHHHHHHHHHHHHHHHHHHHH----cCCCEEE
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-DIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLV 322 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~r~v 322 (600)
++.++.+|+.+. +.++++.. ++|++||+|+.... ....++....++.|+.++.++++++.. .+.+++|
T Consensus 46 ~~~~~~~D~~~~--~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 123 (235)
T PRK06550 46 NFHFLQLDLSDD--LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIII 123 (235)
T ss_pred cEEEEECChHHH--HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 467889999887 44444432 68999999985321 112335567799999999999998864 3346899
Q ss_pred EecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 323 FSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 323 ~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
++||...+... +....|+.+| ...+.+.+.++.+. +++++.++|+.+
T Consensus 124 ~~sS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~~~~~~gi~v~~v~pg~v 173 (235)
T PRK06550 124 NMCSIASFVAG------------GGGAAYTASK---HALAGFTKQLALDYAKDGIQVFGIAPGAV 173 (235)
T ss_pred EEcChhhccCC------------CCCcccHHHH---HHHHHHHHHHHHHhhhcCeEEEEEeeCCc
Confidence 99997654221 1236799999 56677777777653 788888887654
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00037 Score=64.22 Aligned_cols=114 Identities=23% Similarity=0.256 Sum_probs=82.0
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHcCCCEE
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHGVYQL 321 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~ 321 (600)
+..+.++.+|+.+...+.+.+.. ..+|.+||+|+...... ..++....++.|+.++.++++++++.+.+++
T Consensus 52 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i 131 (180)
T smart00822 52 GAEVTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFF 131 (180)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceE
Confidence 45677889999998888776653 24799999998643221 2244567789999999999999988778899
Q ss_pred EEecCcc-cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEee
Q psy16545 322 VFSSSCT-VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 381 (600)
Q Consensus 322 v~~SS~~-vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~ 381 (600)
|++||.. .|+.. ....|+.+| ...+.+++.+ ...+++.+.+.+
T Consensus 132 i~~ss~~~~~~~~-------------~~~~y~~sk---~~~~~~~~~~-~~~~~~~~~~~~ 175 (180)
T smart00822 132 VLFSSVAGVLGNP-------------GQANYAAAN---AFLDALAAHR-RARGLPATSINW 175 (180)
T ss_pred EEEccHHHhcCCC-------------CchhhHHHH---HHHHHHHHHH-HhcCCceEEEee
Confidence 9999854 34421 125799999 6677777544 456777666553
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00049 Score=68.89 Aligned_cols=117 Identities=15% Similarity=0.006 Sum_probs=80.9
Q ss_pred ceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcccc----ccChHHHHHHHHHHHHHHHHHHH----HcCCC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMK----SHGVY 319 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~~~----~~~~~ 319 (600)
.++++.+|+.+++++.++++. .++|++||+|+....... .+.....++.|+.++.++.+++. +.+..
T Consensus 51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g 130 (273)
T PRK07825 51 LVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRG 130 (273)
T ss_pred cceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 478899999999988776654 258999999997543221 22345678899998888776654 45667
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHH---HhCCCCeeEeeccc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER---VTGNKPVPYIFYNL 384 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~---~~~~~~~~~r~~~~ 384 (600)
++|++||.+.+... +....|+.+| ...+.+.+.+.. ..+++++.++|+.+
T Consensus 131 ~iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~~~~~l~~el~~~gi~v~~v~Pg~v 183 (273)
T PRK07825 131 HVVNVASLAGKIPV------------PGMATYCASK---HAVVGFTDAARLELRGTGVHVSVVLPSFV 183 (273)
T ss_pred EEEEEcCccccCCC------------CCCcchHHHH---HHHHHHHHHHHHHhhccCcEEEEEeCCcC
Confidence 99999997654321 2236799999 445555555443 35888888887643
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00044 Score=68.43 Aligned_cols=119 Identities=13% Similarity=0.159 Sum_probs=84.3
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+.++.++.+|+.+.+++.++++.. ++|++||+|+...... ..++....++.|+.++.++.+++.+ .+
T Consensus 59 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 138 (256)
T PRK06124 59 GGAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG 138 (256)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 456889999999999888776642 5799999998653221 2234556789999999999876654 45
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.+++|++||...+... +....|+.+| ...+.+++.++.. .++++..++|+.+
T Consensus 139 ~~~iv~~ss~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~~i~v~~i~pg~v 193 (256)
T PRK06124 139 YGRIIAITSIAGQVAR------------AGDAVYPAAK---QGLTGLMRALAAEFGPHGITSNAIAPGYF 193 (256)
T ss_pred CcEEEEEeechhccCC------------CCccHhHHHH---HHHHHHHHHHHHHHHHhCcEEEEEEECCc
Confidence 6799999997543211 1136799999 5567777766644 4788888887653
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00038 Score=71.95 Aligned_cols=118 Identities=12% Similarity=0.080 Sum_probs=80.3
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHH----HHHHHHcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINL----LEVMKSHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~l----l~~~~~~~ 317 (600)
+..+.++.+|++|.+++.++++. -++|++||+|+...... ..++....+++|+.++.++ +..+++.+
T Consensus 56 g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~ 135 (334)
T PRK07109 56 GGEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD 135 (334)
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 45678899999999998887654 25899999998643221 2234456678887776654 44445555
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH-----hCCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV-----TGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~-----~~~~~~~~r~~~ 383 (600)
..+||++||...|... |....|+.+| ...+.+.+.+..+ .+++++.++|+.
T Consensus 136 ~g~iV~isS~~~~~~~------------~~~~~Y~asK---~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~ 191 (334)
T PRK07109 136 RGAIIQVGSALAYRSI------------PLQSAYCAAK---HAIRGFTDSLRCELLHDGSPVSVTMVQPPA 191 (334)
T ss_pred CcEEEEeCChhhccCC------------CcchHHHHHH---HHHHHHHHHHHHHHhhcCCCeEEEEEeCCC
Confidence 6799999998877431 2236799999 5566666666543 256777777654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 600 | ||||
| 1hzj_A | 348 | Human Udp-Galactose 4-Epimerase: Accommodation Of U | 6e-58 | ||
| 1hzj_A | 348 | Human Udp-Galactose 4-Epimerase: Accommodation Of U | 7e-39 | ||
| 1hzj_A | 348 | Human Udp-Galactose 4-Epimerase: Accommodation Of U | 2e-14 | ||
| 1i3k_A | 348 | Molecular Basis For Severe Epimerase-Deficiency Gal | 1e-57 | ||
| 1i3k_A | 348 | Molecular Basis For Severe Epimerase-Deficiency Gal | 1e-38 | ||
| 1i3k_A | 348 | Molecular Basis For Severe Epimerase-Deficiency Gal | 2e-14 | ||
| 1ek5_A | 348 | Structure Of Human Udp-Galactose 4-Epimerase In Com | 1e-57 | ||
| 1ek5_A | 348 | Structure Of Human Udp-Galactose 4-Epimerase In Com | 1e-38 | ||
| 1ek5_A | 348 | Structure Of Human Udp-Galactose 4-Epimerase In Com | 2e-14 | ||
| 2udp_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 1e-47 | ||
| 2udp_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 1e-30 | ||
| 1lrj_A | 338 | Crystal Structure Of E. Coli Udp-Galactose 4-Epimer | 1e-47 | ||
| 1lrj_A | 338 | Crystal Structure Of E. Coli Udp-Galactose 4-Epimer | 1e-30 | ||
| 1lrk_A | 338 | Crystal Structure Of Escherichia Coli Udp-Galactose | 1e-47 | ||
| 1lrk_A | 338 | Crystal Structure Of Escherichia Coli Udp-Galactose | 1e-30 | ||
| 1kvr_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 2e-47 | ||
| 1kvr_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 2e-30 | ||
| 1kvq_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 2e-47 | ||
| 1kvq_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 3e-30 | ||
| 1kvs_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 3e-47 | ||
| 1kvs_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 3e-30 | ||
| 1kvu_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 3e-47 | ||
| 1kvu_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 3e-28 | ||
| 1a9y_A | 338 | Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX | 5e-47 | ||
| 1a9y_A | 338 | Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX | 6e-28 | ||
| 1a9z_A | 338 | Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX | 6e-47 | ||
| 1a9z_A | 338 | Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX | 6e-28 | ||
| 1kvt_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 6e-47 | ||
| 1kvt_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 7e-30 | ||
| 1z45_A | 699 | Crystal Structure Of The Gal10 Fusion Protein Galac | 7e-42 | ||
| 1z45_A | 699 | Crystal Structure Of The Gal10 Fusion Protein Galac | 3e-26 | ||
| 1z45_A | 699 | Crystal Structure Of The Gal10 Fusion Protein Galac | 2e-08 | ||
| 3enk_A | 341 | 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase F | 2e-39 | ||
| 3enk_A | 341 | 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase F | 2e-26 | ||
| 3enk_A | 341 | 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase F | 2e-10 | ||
| 2c20_A | 330 | Crystal Structure Of Udp-Glucose 4-Epimerase Length | 5e-27 | ||
| 2c20_A | 330 | Crystal Structure Of Udp-Glucose 4-Epimerase Length | 5e-16 | ||
| 2c20_A | 330 | Crystal Structure Of Udp-Glucose 4-Epimerase Length | 4e-06 | ||
| 1gy8_A | 397 | Trypanosoma Brucei Udp-Galactose 4' Epimerase Lengt | 5e-20 | ||
| 1gy8_A | 397 | Trypanosoma Brucei Udp-Galactose 4' Epimerase Lengt | 3e-16 | ||
| 1gy8_A | 397 | Trypanosoma Brucei Udp-Galactose 4' Epimerase Lengt | 6e-06 | ||
| 3aw9_A | 308 | Structure Of Udp-Galactose 4-Epimerase Mutant Lengt | 1e-12 | ||
| 3aw9_A | 308 | Structure Of Udp-Galactose 4-Epimerase Mutant Lengt | 8e-11 | ||
| 3icp_A | 312 | Crystal Structure Of Udp-Galactose 4-Epimerase Leng | 2e-12 | ||
| 3icp_A | 312 | Crystal Structure Of Udp-Galactose 4-Epimerase Leng | 3e-10 | ||
| 3ehe_A | 313 | Crystal Structure Of Udp-Glucose 4 Epimerase (Gale- | 4e-11 | ||
| 3ehe_A | 313 | Crystal Structure Of Udp-Glucose 4 Epimerase (Gale- | 7e-10 | ||
| 3vps_A | 321 | Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5 | 9e-08 | ||
| 3vps_A | 321 | Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5 | 1e-07 | ||
| 1sb8_A | 352 | Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A | 1e-07 | ||
| 1sb8_A | 352 | Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A | 6e-04 | ||
| 3lu1_A | 364 | Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4- | 2e-07 | ||
| 3ruc_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 3e-07 | ||
| 3ru9_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 3e-07 | ||
| 3ru7_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 3e-07 | ||
| 4id9_A | 347 | Crystal Structure Of A Short-Chain DehydrogenaseRED | 9e-07 | ||
| 4id9_A | 347 | Crystal Structure Of A Short-Chain DehydrogenaseRED | 1e-05 | ||
| 1bxk_A | 355 | Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = | 3e-06 | ||
| 3a9w_A | 317 | Crystal Structure Of L-Threonine Bound L-Threonine | 6e-06 | ||
| 3a1n_A | 317 | Crystal Structure Of L-Threonine Dehydrogenase From | 6e-06 | ||
| 4egb_A | 346 | 3.0 Angstrom Resolution Crystal Structure Of Dtdp-G | 2e-05 | ||
| 1kep_A | 348 | The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra | 7e-05 | ||
| 2hun_A | 336 | Crystal Structure Of Hypothetical Protein Ph0414 Fr | 7e-05 | ||
| 4ef7_B | 337 | Udp-Xylose Synthase Length = 337 | 1e-04 | ||
| 1g1a_A | 361 | The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra | 8e-04 |
| >pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348 | Back alignment and structure |
|
| >pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348 | Back alignment and structure |
|
| >pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348 | Back alignment and structure |
|
| >pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348 | Back alignment and structure |
|
| >pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348 | Back alignment and structure |
|
| >pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348 | Back alignment and structure |
|
| >pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348 | Back alignment and structure |
|
| >pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348 | Back alignment and structure |
|
| >pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348 | Back alignment and structure |
|
| >pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338 | Back alignment and structure |
|
| >pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338 | Back alignment and structure |
|
| >pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338 | Back alignment and structure |
|
| >pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338 | Back alignment and structure |
|
| >pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338 | Back alignment and structure |
|
| >pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338 | Back alignment and structure |
|
| >pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338 | Back alignment and structure |
|
| >pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338 | Back alignment and structure |
|
| >pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699 | Back alignment and structure |
|
| >pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699 | Back alignment and structure |
|
| >pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699 | Back alignment and structure |
|
| >pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From Burkholderia Pseudomallei Length = 341 | Back alignment and structure |
|
| >pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From Burkholderia Pseudomallei Length = 341 | Back alignment and structure |
|
| >pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From Burkholderia Pseudomallei Length = 341 | Back alignment and structure |
|
| >pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330 | Back alignment and structure |
|
| >pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330 | Back alignment and structure |
|
| >pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330 | Back alignment and structure |
|
| >pdb|1GY8|A Chain A, Trypanosoma Brucei Udp-Galactose 4' Epimerase Length = 397 | Back alignment and structure |
|
| >pdb|1GY8|A Chain A, Trypanosoma Brucei Udp-Galactose 4' Epimerase Length = 397 | Back alignment and structure |
|
| >pdb|1GY8|A Chain A, Trypanosoma Brucei Udp-Galactose 4' Epimerase Length = 397 | Back alignment and structure |
|
| >pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308 | Back alignment and structure |
|
| >pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308 | Back alignment and structure |
|
| >pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312 | Back alignment and structure |
|
| >pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312 | Back alignment and structure |
|
| >pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313 | Back alignment and structure |
|
| >pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313 | Back alignment and structure |
|
| >pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321 | Back alignment and structure |
|
| >pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321 | Back alignment and structure |
|
| >pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352 | Back alignment and structure |
|
| >pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352 | Back alignment and structure |
|
| >pdb|3LU1|A Chain A, Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-Epimerase Length = 364 | Back alignment and structure |
|
| >pdb|3RUC|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|3RU9|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|3RU7|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|4ID9|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SUPERFAMILY Protein From Agrobacterium Tumefaciens (Target Efi-506441) With Bound Nad, Monoclinic Form 1 Length = 347 | Back alignment and structure |
|
| >pdb|4ID9|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SUPERFAMILY Protein From Agrobacterium Tumefaciens (Target Efi-506441) With Bound Nad, Monoclinic Form 1 Length = 347 | Back alignment and structure |
|
| >pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = 355 | Back alignment and structure |
|
| >pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317 | Back alignment and structure |
|
| >pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317 | Back alignment and structure |
|
| >pdb|4EGB|A Chain A, 3.0 Angstrom Resolution Crystal Structure Of Dtdp-Glucose 4,6- Dehydratase (Rfbb) From Bacillus Anthracis Str. Ames In Complex With Nad Length = 346 | Back alignment and structure |
|
| >pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348 | Back alignment and structure |
|
| >pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336 | Back alignment and structure |
|
| >pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348 | Back alignment and structure |
|---|
Score = 320 bits (824), Expect = e-105
Identities = 114/218 (52%), Positives = 141/218 (64%), Gaps = 15/218 (6%)
Query: 5 FYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT 64
F+N G G+ L R + +TG+ V + E DI+ A L +K
Sbjct: 35 FHNAFRGGGSLPESLRRV-QELTGRSVEFE-----EMDILDQGALQRLFKK--------- 79
Query: 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP 124
+ VIHFA +KAVGES+Q+PL YY+ NL TI LLE+MK+HGV LVFSSS TVYG P
Sbjct: 80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNP 139
Query: 125 QFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGE 184
Q+LP+ E HPTG N YGK+K FIEEM++DL +A K WN + LRYFNP GAH SG IGE
Sbjct: 140 QYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGE 199
Query: 185 DPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
DP N+MPY++QVAIG + VFG DY+TEDGTG
Sbjct: 200 DPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348 | Back alignment and structure |
|---|
Score = 214 bits (547), Expect = 2e-64
Identities = 74/153 (48%), Positives = 95/153 (62%), Gaps = 12/153 (7%)
Query: 202 IGSKPHFTV--FGADYETEDGTGKVVAIDNFVNSVHIGD-TPCSIRAIEQFTGKKVDFYS 258
IGS H + A Y V IDNF N+ G P S+R +++ TG+ V+F
Sbjct: 14 IGS--HTVLELLEAGYL-------PVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 259 CDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV 318
D++D+ L +F K+ VIHFA +KAVGES+Q+PL YY+ NL TI LLE+MK+HGV
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124
Query: 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFY 351
LVFSSS TVYG PQ+LP+ E HPTG N Y
Sbjct: 125 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPY 157
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 3e-25
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 4 KFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63
+ YNLGTG G SVLQ+++ E+ +GK +PY V ARREGD+ + YAN LAQ+ELGW+A
Sbjct: 265 RIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAA- 323
Query: 64 THDID 68
+D
Sbjct: 324 -LGLD 327
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 5e-25
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 521 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLA 580
++ + YNLGTG G SVLQ+++ E+ +GK +PY V ARREGD+ + YAN LA
Sbjct: 256 RKLKEQC-GCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLA 314
Query: 581 QRELGWSARCTVK 593
Q ELGW+A +
Sbjct: 315 QEELGWTAALGLD 327
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 3e-10
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 431 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 472
++ + YNLGTG G SVLQ+++ E+ +GK +PY
Sbjct: 256 RKLKEQC-GCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV 296
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 3e-10
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 461 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 502
++ + YNLGTG G SVLQ+++ E+ +GK +PY
Sbjct: 256 RKLKEQC-GCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV 296
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 4e-10
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 413 YNLGTGQGTSVLQLLRTFERVTGKPVPYIF 442
YNLGTG G SVLQ+++ E+ +GK +PY
Sbjct: 267 YNLGTGTGYSVLQMVQAMEKASGKKIPYKV 296
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 1e-08
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 351 YNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 381
YNLGTG G SVLQ+++ E+ +G K +PY
Sbjct: 267 YNLGTGTGYSVLQMVQAMEKASG-KKIPYKV 296
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 1e-08
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 382 YNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 412
YNLGTG G SVLQ+++ E+ +G K +PY
Sbjct: 267 YNLGTGTGYSVLQMVQAMEKASG-KKIPYKV 296
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338 | Back alignment and structure |
|---|
Score = 319 bits (819), Expect = e-105
Identities = 97/208 (46%), Positives = 129/208 (62%), Gaps = 14/208 (6%)
Query: 15 SVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFA 74
S +L ER+ GK ++ EGDI + T++ H ID VIHFA
Sbjct: 36 SKRSVLPVIERLGGKHPTFV-----EGDIRNEALMTEILHD---------HAIDTVIHFA 81
Query: 75 AVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHP 134
+KAVGES+Q+PL YY NN+ T+ L+ M++ V +FSSS TVYG+ +P E P
Sbjct: 82 GLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFP 141
Query: 135 TGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIM 194
TG ++ YGK+K +E++L DL KA +W+I LRYFNPVGAHPSG +GEDP N+M
Sbjct: 142 TGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLM 201
Query: 195 PYLAQVAIGSKPHFTVFGADYETEDGTG 222
PY+AQVA+G + +FG DY TEDGTG
Sbjct: 202 PYIAQVAVGRRDSLAIFGNDYPTEDGTG 229
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338 | Back alignment and structure |
|---|
Score = 212 bits (543), Expect = 6e-64
Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 16/152 (10%)
Query: 202 IGSKPHFTV--FGADYETEDGTGKVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSC 259
IGS H V ++ V+ +DN NS + IE+ GK F
Sbjct: 12 IGS--HTCVQLLQNGHD-------VIILDNLCNS-----KRSVLPVIERLGGKHPTFVEG 57
Query: 260 DLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 319
D+ ++ + EI H ID VIHFA +KAVGES+Q+PL YY NN+ T+ L+ M++ V
Sbjct: 58 DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFY 351
+FSSS TVYG+ +P E PTG ++ Y
Sbjct: 118 NFIFSSSATVYGDNPKIPYVESFPTGTPQSPY 149
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 2e-25
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 4 KFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63
YNLG G G SVL ++ F + GKPV Y RREGD+ + +A+ A +EL W
Sbjct: 257 HIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVT- 315
Query: 64 THDID 68
+D
Sbjct: 316 -RTLD 319
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338 | Back alignment and structure |
|---|
Score = 105 bits (266), Expect = 3e-25
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 521 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLA 580
E++ KP YNLG G G SVL ++ F + GKPV Y RREGD+ + +A+ A
Sbjct: 248 EKLANKP-GVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKA 306
Query: 581 QRELGWSARCTV 592
REL W T+
Sbjct: 307 DRELNWRVTRTL 318
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338 | Back alignment and structure |
|---|
Score = 61.3 bits (150), Expect = 2e-10
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 431 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 472
E++ KP YNLG G G SVL ++ F + GKPV Y F
Sbjct: 248 EKLANKP-GVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHF 288
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338 | Back alignment and structure |
|---|
Score = 61.3 bits (150), Expect = 2e-10
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 461 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 502
E++ KP YNLG G G SVL ++ F + GKPV Y F
Sbjct: 248 EKLANKP-GVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHF 288
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338 | Back alignment and structure |
|---|
Score = 61.3 bits (150), Expect = 3e-10
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 410 YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 442
YNLG G G SVL ++ F + GKPV Y F
Sbjct: 256 VHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHF 288
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338 | Back alignment and structure |
|---|
Score = 56.7 bits (138), Expect = 8e-09
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 379 YIFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 412
YNLG G G SVL ++ F + G KPV Y F
Sbjct: 256 VHIYNLGAGVGNSVLDVVNAFSKACG-KPVNYHF 288
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338 | Back alignment and structure |
|---|
Score = 56.3 bits (137), Expect = 1e-08
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 351 YNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 381
YNLG G G SVL ++ F + G KPV Y F
Sbjct: 259 YNLGAGVGNSVLDVVNAFSKACG-KPVNYHF 288
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341 | Back alignment and structure |
|---|
Score = 314 bits (808), Expect = e-103
Identities = 92/208 (44%), Positives = 122/208 (58%), Gaps = 15/208 (7%)
Query: 15 SVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFA 74
S + + E++TGK + E D+ A + H I IHFA
Sbjct: 41 SKREAIARIEKITGKTPAFH-----ETDVSDERALARIFDA---------HPITAAIHFA 86
Query: 75 AVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHP 134
A+KAVGES+ +P+ YY+NNL + ++LL VM+ V ++VFSSS TVYG P+ PI E P
Sbjct: 87 ALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFP 146
Query: 135 TGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIM 194
N YG+TK E++L+D+ A W + +LRYFNPVGAH SG IGEDP N+M
Sbjct: 147 LSAT-NPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLM 205
Query: 195 PYLAQVAIGSKPHFTVFGADYETEDGTG 222
PY+AQVA+G VFG+DY T DGTG
Sbjct: 206 PYVAQVAVGKLEKLRVFGSDYPTPDGTG 233
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341 | Back alignment and structure |
|---|
Score = 210 bits (536), Expect = 6e-63
Identities = 63/146 (43%), Positives = 81/146 (55%), Gaps = 16/146 (10%)
Query: 202 IGSKPHFTV--FGADYETEDGTGKVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSC 259
IGS H V Y+ VV DN VNS +I IE+ TGK F+
Sbjct: 17 IGS--HTAVELLAHGYD-------VVIADNLVNS-----KREAIARIEKITGKTPAFHET 62
Query: 260 DLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 319
D+ D+ L IF H I IHFAA+KAVGES+ +P+ YY+NNL + ++LL VM+ V
Sbjct: 63 DVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVK 122
Query: 320 QLVFSSSCTVYGEPQFLPITEDHPTG 345
++VFSSS TVYG P+ PI E P
Sbjct: 123 RIVFSSSATVYGVPERSPIDETFPLS 148
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 2e-25
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 6 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTH 65
NLGTG+G SVL+++R FE+ +G+ VPY + ARR GD+ YAN A + +GW A
Sbjct: 263 VNLGTGRGYSVLEVVRAFEKASGRAVPYELVARRPGDVAECYANPAAAAETIGWKAE--R 320
Query: 66 DID 68
D++
Sbjct: 321 DLE 323
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341 | Back alignment and structure |
|---|
Score = 105 bits (266), Expect = 4e-25
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 521 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLA 580
+ + + + NLGTG+G SVL+++R FE+ +G+ VPY + ARR GD+ YAN A
Sbjct: 252 DALERRD-ASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARRPGDVAECYANPAAA 310
Query: 581 QRELGWSARCTVK 593
+GW A ++
Sbjct: 311 AETIGWKAERDLE 323
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341 | Back alignment and structure |
|---|
Score = 60.9 bits (149), Expect = 3e-10
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 431 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 472
+ + + + NLGTG+G SVL+++R FE+ +G+ VPY
Sbjct: 252 DALERRD-ASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYEL 292
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341 | Back alignment and structure |
|---|
Score = 60.9 bits (149), Expect = 3e-10
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 461 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 502
+ + + + NLGTG+G SVL+++R FE+ +G+ VPY
Sbjct: 252 DALERRD-ASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYEL 292
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341 | Back alignment and structure |
|---|
Score = 60.9 bits (149), Expect = 3e-10
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 413 YNLGTGQGTSVLQLLRTFERVTGKPVPYIF 442
NLGTG+G SVL+++R FE+ +G+ VPY
Sbjct: 263 VNLGTGRGYSVLEVVRAFEKASGRAVPYEL 292
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341 | Back alignment and structure |
|---|
Score = 56.3 bits (137), Expect = 9e-09
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 351 YNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 381
NLGTG+G SVL+++R FE+ +G + VPY
Sbjct: 263 VNLGTGRGYSVLEVVRAFEKASG-RAVPYEL 292
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341 | Back alignment and structure |
|---|
Score = 56.3 bits (137), Expect = 9e-09
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 382 YNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 412
NLGTG+G SVL+++R FE+ +G + VPY
Sbjct: 263 VNLGTGRGYSVLEVVRAFEKASG-RAVPYEL 292
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 301 bits (772), Expect = 1e-93
Identities = 91/213 (42%), Positives = 124/213 (58%), Gaps = 20/213 (9%)
Query: 15 SVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFA 74
S + E +T +P+ E D+ + ++ + ID VIHFA
Sbjct: 47 STYDSVARLEVLTKHHIPFY-----EVDLCDRKGLEKVFKE---------YKIDSVIHFA 92
Query: 75 AVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE----PQFLPIT 130
+KAVGES Q PL YY NN++ T+ LLE+M+ + V + VFSSS TVYG+ P +PI
Sbjct: 93 GLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIP 152
Query: 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKE-WNIISLRYFNPVGAHPSGRIGEDPTKS 189
E+ P G N YG TK+ IE +L DL + K+ W LRYFNP+GAHPSG IGEDP
Sbjct: 153 EECPLGPT-NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGI 211
Query: 190 FTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
N++PY+AQVA+G + +FG DY++ DGT
Sbjct: 212 PNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTP 244
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 201 bits (513), Expect = 2e-56
Identities = 63/150 (42%), Positives = 83/150 (55%), Gaps = 20/150 (13%)
Query: 202 IGSKPHFTV--FGADYETEDGTGKVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSC 259
IGS H V Y+ V DN NS T S+ +E T + FY
Sbjct: 23 IGS--HTVVELIENGYD-------CVVADNLSNS-----TYDSVARLEVLTKHHIPFYEV 68
Query: 260 DLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 319
DL D+ L ++F ++ ID VIHFA +KAVGES Q PL YY NN++ T+ LLE+M+ + V
Sbjct: 69 DLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVS 128
Query: 320 QLVFSSSCTVYGE----PQFLPITEDHPTG 345
+ VFSSS TVYG+ P +PI E+ P G
Sbjct: 129 KFVFSSSATVYGDATRFPNMIPIPEECPLG 158
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 4e-24
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 517 LRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYAN 576
L+ E +NLG+G+G++V ++ F + +G +PY V RR GD++++ A
Sbjct: 262 LQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAK 321
Query: 577 TDLAQRELGWSARCTV 592
D A+REL W V
Sbjct: 322 PDRAKRELKWQTELQV 337
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 6e-24
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 4 KFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63
+ +NLG+G+G++V ++ F + +G +PY V RR GD++++ A D A++EL W
Sbjct: 276 REWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAKPDRAKRELKWQT-- 333
Query: 64 THDID 68
++
Sbjct: 334 ELQVE 338
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 3e-10
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 427 LRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 472
L+ E +NLG+G+G++V ++ F + +G +PY
Sbjct: 262 LQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKV 307
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 3e-10
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 457 LRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 502
L+ E +NLG+G+G++V ++ F + +G +PY
Sbjct: 262 LQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKV 307
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 7e-10
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 396 LRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 442
L+ E N+ + +NLG+G+G++V ++ F + +G +PY
Sbjct: 262 LQYLEAYNENEGL-CREWNLGSGKGSTVFEVYHAFCKASGIDLPYKV 307
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 2e-08
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 365 LRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 412
L+ E N+ + +NLG+G+G++V ++ F + +G +PY
Sbjct: 262 LQYLEAYNENEGL-CREWNLGSGKGSTVFEVYHAFCKASG-IDLPYKV 307
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 3e-08
Identities = 10/31 (32%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 351 YNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 381
+NLG+G+G++V ++ F + +G +PY
Sbjct: 278 WNLGSGKGSTVFEVYHAFCKASG-IDLPYKV 307
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330 | Back alignment and structure |
|---|
Score = 273 bits (702), Expect = 2e-87
Identities = 69/159 (43%), Positives = 91/159 (57%), Gaps = 3/159 (1%)
Query: 64 THDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 123
+I+ V+HFAA VG SM++PL YY NN+ + LLEVM V + +FSS+ YGE
Sbjct: 65 QENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGE 124
Query: 124 PQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIG 183
ITE+ T N YG+TK IE+ML S+A RYFN GA P+G IG
Sbjct: 125 VDVDLITEETMTNPT-NTYGETKLAIEKMLHWYSQAS-NLRYKIFRYFNVAGATPNGIIG 182
Query: 184 EDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222
ED T+++P + QVA+G + +FG DY T DGT
Sbjct: 183 EDHRPE-THLIPLVLQVALGQREKIMMFGDDYNTPDGTC 220
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330 | Back alignment and structure |
|---|
Score = 174 bits (443), Expect = 1e-49
Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 12/123 (9%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHF 282
VV +DN AI + FY+ DL DK L ++F + +I+ V+HF
Sbjct: 27 SVVVVDNLQTG--------HEDAIT----EGAKFYNGDLRDKAFLRDVFTQENIEAVMHF 74
Query: 283 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDH 342
AA VG SM++PL YY NN+ + LLEVM V + +FSS+ YGE ITE+
Sbjct: 75 AADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEET 134
Query: 343 PTG 345
T
Sbjct: 135 MTN 137
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330 | Back alignment and structure |
|---|
Score = 97.9 bits (245), Expect = 2e-22
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 6 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTH 65
YNLG G G SV +++ VT +P V RR GD + A++ A+++LGW R
Sbjct: 250 YNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARLVASSQKAKEKLGWDPRYV- 308
Query: 66 DIDCVI 71
++ +I
Sbjct: 309 NVKTII 314
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330 | Back alignment and structure |
|---|
Score = 97.5 bits (244), Expect = 2e-22
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 533 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSAR 589
YNLG G G SV +++ VT +P V RR GD + A++ A+ +LGW R
Sbjct: 250 YNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARLVASSQKAKEKLGWDPR 306
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330 | Back alignment and structure |
|---|
Score = 58.6 bits (143), Expect = 2e-09
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 413 YNLGTGQGTSVLQLLRTFERVTGKPVPYIF 442
YNLG G G SV +++ VT +P
Sbjct: 250 YNLGNGNGFSVKEIVDAVREVTNHEIPAEV 279
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330 | Back alignment and structure |
|---|
Score = 58.6 bits (143), Expect = 2e-09
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 443 YNLGTGQGTSVLQLLRTFERVTGKPVPYIF 472
YNLG G G SV +++ VT +P
Sbjct: 250 YNLGNGNGFSVKEIVDAVREVTNHEIPAEV 279
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330 | Back alignment and structure |
|---|
Score = 58.6 bits (143), Expect = 2e-09
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 473 YNLGTGQGTSVLQLLRTFERVTGKPVPYIF 502
YNLG G G SV +++ VT +P
Sbjct: 250 YNLGNGNGFSVKEIVDAVREVTNHEIPAEV 279
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330 | Back alignment and structure |
|---|
Score = 54.0 bits (131), Expect = 5e-08
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 345 GNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 381
G +FYNLG G G SV +++ VT +P
Sbjct: 244 GGESDFYNLGNGNGFSVKEIVDAVREVTN-HEIPAEV 279
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330 | Back alignment and structure |
|---|
Score = 54.0 bits (131), Expect = 6e-08
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 382 YNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 412
YNLG G G SV +++ VT +P
Sbjct: 250 YNLGNGNGFSVKEIVDAVREVTN-HEIPAEV 279
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397 | Back alignment and structure |
|---|
Score = 265 bits (679), Expect = 3e-83
Identities = 69/245 (28%), Positives = 103/245 (42%), Gaps = 40/245 (16%)
Query: 7 NLGTGQGTSV-----LQLLRTFERVTGKPVPYIVEARR--EGDIVSMYANTDLAQKELGW 59
+L G S + R ++ G P+ GD+ N D
Sbjct: 35 SLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDV----RNEDFLNGVFT- 89
Query: 60 SARCTHD-IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSC 118
H ID V+H A AVGES+++PL YY NN++ + LL+ M H +++FSSS
Sbjct: 90 ----RHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSA 145
Query: 119 TVYGEPQF-------LPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYF 171
++G P PI + + YG++K E M++D ++A+ I LRYF
Sbjct: 146 AIFGNPTMGSVSTNAEPIDINAKKSPE-SPYGESKLIAERMIRDCAEAY-GIKGICLRYF 203
Query: 172 NPVGAHPSGRIGEDPTKSFT----NIMPYLAQVAIG----------SKPHFTVFGADYET 217
N GAH G IGE S + ++ +A + +FG DY T
Sbjct: 204 NACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPT 263
Query: 218 EDGTG 222
DGT
Sbjct: 264 PDGTC 268
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397 | Back alignment and structure |
|---|
Score = 175 bits (446), Expect = 2e-49
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 19/142 (13%)
Query: 223 KVVAIDNFVNS----VHIGDTPCSIRAIEQFTG-------KKVDFYSCDLVDKNRLGEIF 271
VV +D+ V + H+ R ++Q G + D+ +++ L +F
Sbjct: 29 SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGVF 88
Query: 272 AKHD-IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330
+H ID V+H A AVGES+++PL YY NN++ + LL+ M H +++FSSS ++
Sbjct: 89 TRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIF 148
Query: 331 GEPQF-------LPITEDHPTG 345
G P PI +
Sbjct: 149 GNPTMGSVSTNAEPIDINAKKS 170
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 4e-23
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 6 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTH 65
+NLGT +G SV +++ + TG P+P RREGD + A +D A++ LGW +
Sbjct: 304 FNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYD- 362
Query: 66 DID 68
++
Sbjct: 363 TLE 365
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 6e-23
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 533 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSAR 589
+NLGT +G SV +++ + TG P+P RREGD + A +D A+ LGW +
Sbjct: 304 FNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPK 360
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 4e-10
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 392 VLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 442
+L L + +K + +NLGT +G SV +++ + TG P+P
Sbjct: 283 ILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRE 333
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 5e-10
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 443 YNLGTGQGTSVLQLLRTFERVTGKPVPYIF 472
+NLGT +G SV +++ + TG P+P
Sbjct: 304 FNLGTSRGYSVREVIEVARKTTGHPIPVRE 333
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 5e-10
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 473 YNLGTGQGTSVLQLLRTFERVTGKPVPYIF 502
+NLGT +G SV +++ + TG P+P
Sbjct: 304 FNLGTSRGYSVREVIEVARKTTGHPIPVRE 333
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 361 VLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 412
+L L + +K + +NLGT +G SV +++ + TG P+P
Sbjct: 283 ILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTG-HPIPVRE 333
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 2e-08
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 351 YNLGTGQGTSVLQLLRTFERVTGNKPVPYIF 381
+NLGT +G SV +++ + TG P+P
Sbjct: 304 FNLGTSRGYSVREVIEVARKTTG-HPIPVRE 333
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 188 bits (479), Expect = 9e-55
Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 23/151 (15%)
Query: 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP 124
V+H AA + + N+ +IN+ + GV +L+ + YG P
Sbjct: 87 FKPTHVVHSAAA---YKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRP 143
Query: 125 QFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGE 184
+PI D PT YG +K E L + ++SLR N G IG
Sbjct: 144 ATVPIPIDSPTAPF-TSYGISKTAGEAFLMMS-----DVPVVSLRLANVTGPR--LAIGP 195
Query: 185 DPTKSFTNIMPYLAQVAIGSKPHFTVFGADY 215
P + ++ G K F +D
Sbjct: 196 IP--------TFYKRLKAGQK----CFCSDT 214
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 3e-52
Identities = 42/248 (16%), Positives = 75/248 (30%), Gaps = 59/248 (23%)
Query: 224 VVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFA 283
++ IDNF + + + D L F V+H A
Sbjct: 47 ILVIDNFATG--------KREVLPP--VAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSA 96
Query: 284 AVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHP 343
A + + N+ +IN+ + GV +L+ + YG P +PI D P
Sbjct: 97 AA---YKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSP 153
Query: 344 TGNIKNFYNLGTGQGTSVL---QLLRTFERVTGNKPVPYI---FYN-----LGTGQGTSV 392
T Y G S L + VP + N L G +
Sbjct: 154 TAPF-TSY------GISKTAGEAFLMMSD-------VPVVSLRLANVTGPRLAIGPIPTF 199
Query: 393 LQLLRTFERVTGNKPVP-YIF--------------------YNLGTGQGTSVLQLLRTFE 431
+ L+ ++ + V ++ +N+ TG+G S+ ++
Sbjct: 200 YKRLKAGQKCFCSDTVRDFLDMSDFLAIADLSLQEGRPTGVFNVSTGEGHSIKEVFDVVL 259
Query: 432 RVTGKPVP 439
G +
Sbjct: 260 DYVGATLA 267
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 8e-20
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 6 YNLGTGQGTSVLQLLRTFERVTGKPV--PYIVEARREGDIVSMYANTDLAQKELGWSARC 63
+N+ TG+G S+ ++ G + P V A D+ S+ + + E GW A+
Sbjct: 241 FNVSTGEGHSIKEVFDVVLDYVGATLAEPVPVVAPGADDVPSVVLDPSKTETEFGWKAK- 299
Query: 64 THDID 68
D
Sbjct: 300 -VDFK 303
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 88.8 bits (221), Expect = 2e-19
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 533 YNLGTGQGTSVLQLLRTFERVTGKPV--PYIVEARREGDIVSMYANTDLAQRELGWSARC 590
+N+ TG+G S+ ++ G + P V A D+ S+ + + E GW A+
Sbjct: 241 FNVSTGEGHSIKEVFDVVLDYVGATLAEPVPVVAPGADDVPSVVLDPSKTETEFGWKAKV 300
Query: 591 TVK 593
K
Sbjct: 301 DFK 303
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 5e-07
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 473 YNLGTGQGTSVLQLLRTFERVTGKPVP 499
+N+ TG+G S+ ++ G +
Sbjct: 241 FNVSTGEGHSIKEVFDVVLDYVGATLA 267
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 5e-06
Identities = 7/32 (21%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 351 YNLGTGQGTSVLQLLRTFERVTGNK-PVPYIF 381
+N+ TG+G S+ ++ G P
Sbjct: 241 FNVSTGEGHSIKEVFDVVLDYVGATLAEPVPV 272
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 168 bits (429), Expect = 7e-48
Identities = 65/279 (23%), Positives = 103/279 (36%), Gaps = 66/279 (23%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGK------KVDFYSCDLVDKNRLGEIFAKHDI 276
+V +DN TGK V F+ DL DK + F +
Sbjct: 26 EVAVLDNLA------------------TGKRENVPKGVPFFRVDLRDKEGVERAFREFRP 67
Query: 277 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSS-CTVYGE-PQ 334
V H AA +V S+++P++ ++ NL+ +NLLE + +GV +LVF+S+ +YGE P+
Sbjct: 68 THVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPE 127
Query: 335 FLPITEDHPTGNIKNFYNLGTGQGTSVL---QLLRTFERVTGNKPVPYIFYNL-GTGQG- 389
E P + Y S L + + G K V + N+ G Q
Sbjct: 128 GERAEETWPPRPK-SPY------AASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDP 180
Query: 390 ---TSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSV-------------LQLLRTFERV 433
V+ + ERV P ++ G V L + E +
Sbjct: 181 HGEAGVVAIF--AERVLKGLP-VTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSLEGI 237
Query: 434 TGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 472
YN+GTG+G + ++L GK
Sbjct: 238 ---------YNVGTGEGHTTREVLMAVAEAAGKAPEVQP 267
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 166 bits (424), Expect = 4e-47
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 13/173 (7%)
Query: 51 DLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 110
DL KE A V H AA +V S+++P++ ++ NL+ +NLLE + +GV
Sbjct: 51 DLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVE 110
Query: 111 QLVFSSS-CTVYGE-PQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISL 168
+LVF+S+ +YGE P+ E P + Y +K E L +++ +SL
Sbjct: 111 KLVFASTGGAIYGEVPEGERAEETWPPRPK-SPYAASKAAFEHYLSVYGQSY-GLKWVSL 168
Query: 169 RYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGT 221
RY N G +DP ++ A+ + P T++ D
Sbjct: 169 RYGNVYGP------RQDP-HGEAGVVAIFAERVLKGLP-VTLYARKTPG-DEG 212
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 1e-16
Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Query: 533 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTV 592
YN+GTG+G + ++L GK R GD+ + GW +
Sbjct: 238 YNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVLSPLKL-MAHGWRPKVGF 296
Query: 593 K 593
+
Sbjct: 297 Q 297
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 79.1 bits (196), Expect = 2e-16
Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Query: 6 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTH 65
YN+GTG+G + ++L GK R GD+ + GW +
Sbjct: 238 YNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVLSPLKL-MAHGWRPK--V 294
Query: 66 DID 68
Sbjct: 295 GFQ 297
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 1e-45
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 22/171 (12%)
Query: 51 DLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 110
DLA ++ + V H AA V + P Y+NN++AT LLE M+ GV
Sbjct: 51 DLAADDI---KDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVS 107
Query: 111 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRY 170
++VF+S+ TVYGE + +P ED+PT + ++YG +K E +++ R+
Sbjct: 108 RIVFTSTSTVYGEAKVIPTPEDYPT-HPISLYGASKLACEALIESYCHTFD-MQAWIYRF 165
Query: 171 FNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGT 221
N +G + + I ++ ++ + + G +G
Sbjct: 166 ANVIGRRSTHGV----------IYDFIMKLKRNPEE-LEILG------NGE 199
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 2e-45
Identities = 56/261 (21%), Positives = 96/261 (36%), Gaps = 39/261 (14%)
Query: 222 GKVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIH 281
++V IDN + G + + + DL + + + + V H
Sbjct: 25 NEIVVIDNLSS----G----NEEFVN----EAARLVKADLAADD-IKDYL--KGAEEVWH 69
Query: 282 FAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITED 341
AA V + P Y+NN++AT LLE M+ GV ++VF+S+ TVYGE + +P ED
Sbjct: 70 IAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPED 129
Query: 342 HPTGNIKNFYNLGTGQGTSVL---QLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLR 397
+PT + + Y G S L L+ ++ + Y F N +G V+
Sbjct: 130 YPT-HPISLY------GASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDF- 181
Query: 398 TFERVTGNKPVPYIFYNLGTGQGT------SVLQLLRTFERVTGKPVPYIFYNLGTGQGT 451
++ N I G G + + +N+G+
Sbjct: 182 -IMKLKRNPEELEIL-----GNGEQNKSYIYISDCVDAMLFGLRGDERVNIFNIGSEDQI 235
Query: 452 SVLQLLRTFERVTGKPVPYIF 472
V ++ G + F
Sbjct: 236 KVKRIAEIVCEELGLSPRFRF 256
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 3e-12
Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 4/64 (6%)
Query: 533 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEA---RREGDIVSMYANTDLAQRELGWSAR 589
+N+G+ V ++ G + +GD+ M + + + LGW R
Sbjct: 227 FNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKL-KRLGWKPR 285
Query: 590 CTVK 593
+
Sbjct: 286 YNSE 289
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 4e-12
Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 6 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEA---RREGDIVSMYANTDLAQKELGWSAR 62
+N+G+ V ++ G + +GD+ M + + K LGW R
Sbjct: 227 FNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKL-KRLGWKPR 285
Query: 63 CT 64
Sbjct: 286 YN 287
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 1e-44
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQ 125
D V HFAA V S EP++++ N++AT N+LE + GV +VF+SS TVYG+
Sbjct: 62 KGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDAD 121
Query: 126 FLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGED 185
+P E+ P +VYG K E M ++ +++RY N VG + D
Sbjct: 122 VIPTPEEEPY-KPISVYGAAKAAGEVMCATYARLFG-VRCLAVRYANVVGPRLRHGVIYD 179
Query: 186 PTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGT 221
F ++ V G DGT
Sbjct: 180 ----FIM------KLRRNPNV-LEVLG------DGT 198
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 1e-42
Identities = 60/264 (22%), Positives = 100/264 (37%), Gaps = 44/264 (16%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHF 282
+VV +DN + G + + + DL D A D V HF
Sbjct: 26 EVVVVDNLSS----G----RREFVN----PSAELHVRDLKDY----SWGAGIKGDVVFHF 69
Query: 283 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDH 342
AA V S EP++++ N++AT N+LE + GV +VF+SS TVYG+ +P E+
Sbjct: 70 AANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEE 129
Query: 343 PTGNIKNFYNLGTGQGTSVL---QLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRT 398
P + Y G + + T+ R+ G + + + N +G V+
Sbjct: 130 PY-KPISVY------GAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDF-- 180
Query: 399 FERVTGNKPVPYIFYNLGTGQGTS----------VLQLLRTFERVTGKPVPYIFYNLGTG 448
++ N V + G GT V L +++ P++ N+G
Sbjct: 181 IMKLRRNPNVLEVL-----GDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNV 235
Query: 449 QGTSVLQLLRTFERVTGKPVPYIF 472
VL + + V G
Sbjct: 236 DAVRVLDIAQIVAEVLGLRPEIRL 259
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 3e-13
Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 6/81 (7%)
Query: 517 LRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE------GDI 570
L +++ P++ N+G VL + + V G + GD+
Sbjct: 214 LAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDV 273
Query: 571 VSMYANTDLAQRELGWSARCT 591
M + GW T
Sbjct: 274 KYMTLAVTKLMKLTGWRPTMT 294
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 1e-12
Identities = 13/65 (20%), Positives = 18/65 (27%), Gaps = 6/65 (9%)
Query: 6 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE------GDIVSMYANTDLAQKELGW 59
N+G VL + + V G + GD+ M K GW
Sbjct: 230 LNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGW 289
Query: 60 SARCT 64
T
Sbjct: 290 RPTMT 294
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 154 bits (390), Expect = 1e-41
Identities = 40/183 (21%), Positives = 63/183 (34%), Gaps = 27/183 (14%)
Query: 64 THDIDCVIHFAAVKAVGESM---QEPLMYYKNNLIATINLLEVMKSHGV-YQLVFSSSCT 119
+ + D V+HF ++ SM + NN+I T+N+L +K G LV +
Sbjct: 98 SFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMG 157
Query: 120 VYGEPQ------FLPITEDHPTGNIK------NVYGKTKHFIEEMLKDLSKAHKEWNIIS 167
YG P ++ IT + T + + Y +K + KA
Sbjct: 158 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG-IRATD 216
Query: 168 LRYFN-------PVGAHPSGRIGEDPTKSF-TNIMPYLAQVAIGSKPHFTVFGADYETED 219
L H R D F T + + Q A+G P TV+G +T
Sbjct: 217 LNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVG-HP-LTVYGKGGQTRG 274
Query: 220 GTG 222
Sbjct: 275 YLD 277
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 2e-38
Identities = 66/400 (16%), Positives = 108/400 (27%), Gaps = 103/400 (25%)
Query: 224 VVAIDNFVNS-----------VHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFA 272
V +DN V I I + TGK ++ Y D+ D L E F
Sbjct: 38 VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESFK 97
Query: 273 KHDIDCVIHFAAVKAVGESM---QEPLMYYKNNLIATINLLEVMKSHGV-YQLVFSSSCT 328
+ D V+HF ++ SM + NN+I T+N+L +K G LV +
Sbjct: 98 SFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMG 157
Query: 329 VYGEPQ------FLPITEDHPTGNIKNFYNLGTGQGTS---VLQLLRTFERVTGNKPVPY 379
YG P ++ IT + T + + S + + G +
Sbjct: 158 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG---IRA 214
Query: 380 IFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTS--VLQLLRTFERVTGKP 437
N G G +T E + + Y+ G + +Q G P
Sbjct: 215 TDLNQGVVYGV------KTDETEMHEELRNRLDYDAVFGTALNRFCVQAA------VGHP 262
Query: 438 VPYIFYNLGTGQ----GTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERV 493
+ ++ G G + ++ E P
Sbjct: 263 LT-VY---GKGGQTRGYLDIRDTVQCVEIAIANP-------------------------- 292
Query: 494 TGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERV 553
K + +N T SV +L + K +
Sbjct: 293 -AKAGEFRVFNQFTE-QFSVNELASLVTKAGSKLGLDV---------------------- 328
Query: 554 TGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVK 593
+ R E + A ELG
Sbjct: 329 ---KKMTVPNPRVEAEEHYYNAKHTKL-MELGLEPHYLSD 364
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 5e-06
Identities = 12/64 (18%), Positives = 17/64 (26%), Gaps = 7/64 (10%)
Query: 6 YNLGTGQGTSVLQLLRTFERVTGK-----PVPYIVEARREGDIVSMYANTDLAQKELGWS 60
+N T SV +L + K + R E + A ELG
Sbjct: 301 FNQFTE-QFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKL-MELGLE 358
Query: 61 ARCT 64
Sbjct: 359 PHYL 362
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 2e-37
Identities = 32/176 (18%), Positives = 61/176 (34%), Gaps = 21/176 (11%)
Query: 64 THDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV-----YQLVFSSSC 118
D + H AA+ GE+ + Y+ NL T L + ++ ++VF+SS
Sbjct: 84 EARPDVIFHLAAI-VSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSI 142
Query: 119 TVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHP 178
V+G P PI ++ T YG K E +L D S+ ++ I +R
Sbjct: 143 AVFGAPLPYPIPDEFHT-TPLTSYGTQKAICELLLSDYSRRG-FFDGIGIRLPT--ICIR 198
Query: 179 SGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGAD---YETEDGTGKVVAIDNFV 231
G+ + + + + + + + A+ +
Sbjct: 199 PGKPNAAA----SGFFSNILREPLVGQEAVLPVPESIRHWHASPRS----AVGFLI 246
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 6e-30
Identities = 47/276 (17%), Positives = 83/276 (30%), Gaps = 48/276 (17%)
Query: 215 YETEDGTGKVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKH 274
K ID F G + VD + DL ++ +
Sbjct: 39 SLGGKPVEKFTLIDVFQPEAPAGFSG------------AVDARAADLSAPGEAEKLV-EA 85
Query: 275 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV-----YQLVFSSSCTV 329
D + H AA+ GE+ + Y+ NL T L + ++ ++VF+SS V
Sbjct: 86 RPDVIFHLAAI-VSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAV 144
Query: 330 YGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVL---QLLRTFERVTGNKPV----PYIFY 382
+G P PI ++ T Y GT LL + R + P I
Sbjct: 145 FGAPLPYPIPDEFHT-TPLTSY------GTQKAICELLLSDYSRRGFFDGIGIRLPTICI 197
Query: 383 NLG--TGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQ-------GTSVLQLLRTFERV 433
G + + + + + ++V L+
Sbjct: 198 RPGKPNAAASGFFSNI--LREPLVGQ--EAVLP-VPESIRHWHASPRSAVGFLIHGAMID 252
Query: 434 TGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP 469
K P ++ G +V + + +V G+
Sbjct: 253 VEKVGPRRNLSM-PGLSATVGEQIEALRKVAGEKAV 287
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 10/63 (15%), Positives = 22/63 (34%), Gaps = 7/63 (11%)
Query: 533 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANT------DLAQRELGW 586
G +V + + +V G+ ++ R +++ RELG+
Sbjct: 261 NLSMPGLSATVGEQIEALRKVAGEKAVALIR-REPNEMIMRMCEGWAPGFEAKRARELGF 319
Query: 587 SAR 589
+A
Sbjct: 320 TAE 322
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 7e-05
Identities = 9/69 (13%), Positives = 23/69 (33%), Gaps = 9/69 (13%)
Query: 6 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANT------DLAQKELGW 59
G +V + + +V G+ ++ R +++ +ELG+
Sbjct: 261 NLSMPGLSATVGEQIEALRKVAGEKAVALIR-REPNEMIMRMCEGWAPGFEAKRARELGF 319
Query: 60 SARCTHDID 68
+A +
Sbjct: 320 TAE--SSFE 326
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 4e-30
Identities = 38/289 (13%), Positives = 81/289 (28%), Gaps = 67/289 (23%)
Query: 202 IGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDL 261
+G + + DG + + + K ++ Y +
Sbjct: 14 LGQ--YV----VESIKNDGN-TPIILTRSI------------------GNKAINDYEYRV 48
Query: 262 VDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQL 321
D I +D+D V+H AA + + E +N I T NL + + + +
Sbjct: 49 SDYTLEDLINQLNDVDAVVHLAATRGSQGKISEF----HDNEILTQNLYDACYENNISNI 104
Query: 322 VFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVL---QLLRTFERVTGNKPVP 378
V++S+ + Y + LP E Y G S L + + R G +
Sbjct: 105 VYASTISAYSDETSLPWNEKELPLPD-LMY------GVSKLACEHIGNIYSRKKG---LC 154
Query: 379 YI----FYNLGTGQGTS------VLQLLRTFERVTGNKPVPYIFYNLGTGQGT----SVL 424
+ G + + Q + + +
Sbjct: 155 IKNLRFAHLYGFNEKNNYMINRFFRQAFH-------GEQLT-LH---ANSVAKREFLYAK 203
Query: 425 QLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFY 473
++ + +N+G+G + ++ T G +
Sbjct: 204 DAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVK 252
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 6e-25
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP 124
+D+D V+H AA + + E +N I T NL + + + +V++S+ + Y +
Sbjct: 61 NDVDAVVHLAATRGSQGKISEF----HDNEILTQNLYDACYENNISNIVYASTISAYSDE 116
Query: 125 QFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFN 172
LP E +YG +K E + S+ I +LR+ +
Sbjct: 117 TSLPWNEKELPLPD-LMYGVSKLACEHIGNIYSRKKG-LCIKNLRFAH 162
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 8e-11
Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Query: 526 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIV-EARREGDIVSMYANTDLAQREL 584
+ +N+G+G + ++ T G +V I S Y ++ A+ L
Sbjct: 215 QEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELL 274
Query: 585 GWSARCTVK 593
+S
Sbjct: 275 DFSTDYNFA 283
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 1e-10
Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 2 INKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIV-EARREGDIVSMYANTDLAQKELGWS 60
++ +N+G+G + ++ T G +V I S Y ++ A++ L +S
Sbjct: 218 VSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFS 277
Query: 61 AR 62
Sbjct: 278 TD 279
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-27
Identities = 50/242 (20%), Positives = 85/242 (35%), Gaps = 44/242 (18%)
Query: 223 KVVAIDNFV--NSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVI 280
KVV IDNF H+ D P + F + D + ++ D V+
Sbjct: 47 KVVGIDNFATGRREHLKDHP------------NLTFVEGSIADHALVNQLIGDLQPDAVV 94
Query: 281 HFAAVKAVGESMQEPLMYYKN---NLIATINLLEVMKSHGVYQLVFSSSCTVYG-EPQFL 336
H AA S ++P +Y + N + N+++ K + V + V+ + YG +P
Sbjct: 95 HTAA------SYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQ 148
Query: 337 PITEDHPTGNIKNFYNLGTGQGTSVLQL-------LRTFERVTGNKPVP---YIFYN-LG 385
P+ DHP + Y + L+ R V G + V IF+ L
Sbjct: 149 PVRLDHPRNPANSSYAISKSANEDYLEYSGLDFVTFRLAN-VVGPRNVSGPLPIFFQRLS 207
Query: 386 TGQGTSVLQLLRTF----ERVTGN----KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP 437
G+ V + R F + V + Y+ +G ++ +L P
Sbjct: 208 EGKKCFVTKARRDFVFVKDLARATVRAVDGVGHGAYHFSSGTDVAIKELYDAVVEAMALP 267
Query: 438 VP 439
Sbjct: 268 SY 269
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 7e-23
Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 21/139 (15%)
Query: 51 DLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKN---NLIATINLLEVMKSH 107
+A L D V+H AA S ++P +Y + N + N+++ K +
Sbjct: 74 SIADHALVNQLIGDLQPDAVVHTAA------SYKDPDDWYNDTLTNCVGGSNVVQAAKKN 127
Query: 108 GVYQLVFSSSCTVYG-EPQFLPITEDHPTGNIKNVYGKTKHFIEEMLK--DLSKAHKEWN 164
V + V+ + YG +P P+ DHP + Y +K E+ L+ L +
Sbjct: 128 NVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGL-------D 180
Query: 165 IISLRYFNPVGAHPSGRIG 183
++ R N VG P G
Sbjct: 181 FVTFRLANVVG--PRNVSG 197
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 3e-10
Identities = 11/68 (16%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Query: 528 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEAR--REGDIVSMYANTDLAQRELG 585
V + Y+ +G ++ +L P E R D S+ + ++ G
Sbjct: 238 VGHGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPDDAPSILLDPSRTIQDFG 297
Query: 586 WSARCTVK 593
+K
Sbjct: 298 KIEFTPLK 305
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 7e-10
Identities = 9/62 (14%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Query: 3 NKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEAR--REGDIVSMYANTDLAQKELGWS 60
+ Y+ +G ++ +L P E R D S+ + ++ G
Sbjct: 240 HGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPDDAPSILLDPSRTIQDFGKI 299
Query: 61 AR 62
Sbjct: 300 EF 301
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 5e-27
Identities = 52/267 (19%), Positives = 90/267 (33%), Gaps = 45/267 (16%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHF 282
KVV +DNF + H + + + F D+ + + +D V+H
Sbjct: 53 KVVGLDNF-ATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC--AGVDYVLHQ 109
Query: 283 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDH 342
AA+ +V S+ +P+ N+ +N+L + V +++S + YG+ LP ED
Sbjct: 110 AALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDT 169
Query: 343 PTGNIKNFYNLGTGQGTSVL---QLLRTFERVTGNKPVPYI---FYNL-GTGQ---GTSV 392
G + Y + F R G I ++N+ G Q G
Sbjct: 170 I-GKPLSPY------AVTKYVNELYADVFSRCYG---FSTIGLRYFNVFGRRQDPNGAYA 219
Query: 393 LQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERV------------TGKPVPY 440
+ + + YI G G+ + R F + G
Sbjct: 220 AVIPKWTSSMIQGDD-VYIN---GDGETS------RDFCYIENTVQANLLAATAGLDARN 269
Query: 441 IFYNLGTGQGTSVLQLLRTFERVTGKP 467
YN+ G TS+ QL +
Sbjct: 270 QVYNIAVGGRTSLNQLFFALRDGLAEN 296
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 4e-25
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Query: 40 EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATIN 99
+GDI N D +D V+H AA+ +V S+ +P+ N+ +N
Sbjct: 87 QGDI----RNLDDCNNAC-------AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLN 135
Query: 100 LLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKA 159
+L + V +++S + YG+ LP ED G + Y TK+ E S+
Sbjct: 136 MLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTI-GKPLSPYAVTKYVNELYADVFSRC 194
Query: 160 HKEWNIISLRYFN 172
+ ++ I LRYFN
Sbjct: 195 YG-FSTIGLRYFN 206
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 5e-08
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Query: 524 TGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK-----PVPYIVEARREGDIVSMYANTD 578
G YN+ G TS+ QL + + REGD+ A+
Sbjct: 263 AGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADIS 322
Query: 579 LAQRELGWSARCTVK 593
A + LG++ + V
Sbjct: 323 KAAKLLGYAPKYDVS 337
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 3 NKFYNLGTGQGTSVLQLLRTFERVTGK-----PVPYIVEARREGDIVSMYANTDLAQKEL 57
N+ YN+ G TS+ QL + + REGD+ A+ A K L
Sbjct: 269 NQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLL 328
Query: 58 GWSAR 62
G++ +
Sbjct: 329 GYAPK 333
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 2e-25
Identities = 35/182 (19%), Positives = 60/182 (32%), Gaps = 20/182 (10%)
Query: 40 EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLM-YYKNNLIATI 98
D+ D D D +IH V S++ P + N+I
Sbjct: 48 ACDL------ADAQA-----VHDLVKDCDGIIHLGGV-----SVERPWNDILQANIIGAY 91
Query: 99 NLLEVMKSHGVYQLVFSSSCTVYGE-PQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLS 157
NL E ++ G ++VF+SS G P+ I + P ++YG +K F E++
Sbjct: 92 NLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPR-RPDSLYGLSKCFGEDLASLYY 150
Query: 158 KAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYET 217
+++R + R+ + V+GA T
Sbjct: 151 HKFD-IETLNIRIGSCFPKPKDARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANT 209
Query: 218 ED 219
E
Sbjct: 210 ES 211
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 9e-21
Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 30/127 (23%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKK---VDFYSCDLVDKNRLGEIFAKHDIDCV 279
+V D G + +CDL D + ++ D D +
Sbjct: 28 EVRLSDIVD------------------LGAAEAHEEIVACDLADAQAVHDLVK--DCDGI 67
Query: 280 IHFAAVKAVGESMQEPLM-YYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE-PQFLP 337
IH V S++ P + N+I NL E ++ G ++VF+SS G P+
Sbjct: 68 IHLGGV-----SVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTR 122
Query: 338 ITEDHPT 344
I + P
Sbjct: 123 IDTEVPR 129
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 2e-25
Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 5/108 (4%)
Query: 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP 124
D++ + H A + E + +M NN + LL + +++SS YG
Sbjct: 67 GDVEAIFHEGACSSTTEWDGKYMM--DNNYQYSKELLHYCLEREI-PFLYASSAATYGGR 123
Query: 125 QFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFN 172
I + NVYG +K +E ++ + I+ RYFN
Sbjct: 124 TSDFIESREYEKPL-NVYGYSKFLFDEYVRQILPEAN-SQIVGFRYFN 169
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 3e-21
Identities = 46/273 (16%), Positives = 81/273 (29%), Gaps = 80/273 (29%)
Query: 218 EDGTGKVVAIDNFVNSVHIGDTPCSIRAIEQFTGKK----VDFYSCDLVDK----NRLGE 269
+ G ++ +DN G K VD D +DK ++
Sbjct: 21 DKGITDILVVDNLK------------------DGTKFVNLVDLNIADYMDKEDFLIQIMA 62
Query: 270 IFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 329
D++ + H A + E + +M NN + LL + +++SS
Sbjct: 63 GEEFGDVEAIFHEGACSSTTEWDGKYMM--DNNYQYSKELLHYCLEREI-PFLYASSAAT 119
Query: 330 YGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVL---QLLRTFERVTGNKPVPYIFYNL-G 385
YG I + N Y G S + +R ++ V + ++N+ G
Sbjct: 120 YGGRTSDFIESREYEKPL-NVY------GYSKFLFDEYVRQILPEANSQIVGFRYFNVYG 172
Query: 386 -----TGQGTSVLQLLRTFERVTGNKPVPYIF---------------------------- 412
G SV ++ + P +F
Sbjct: 173 PREGHKGSMASV--AFHLNTQLNNGES-PKLFEGSENFKRDFVYVGDVADVNLWFLENGV 229
Query: 413 ---YNLGTGQGTSVLQLLRTFERVTGKP-VPYI 441
+NLGTG+ S + K + YI
Sbjct: 230 SGIFNLGTGRAESFQAVADATLAYHKKGQIEYI 262
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-05
Identities = 10/64 (15%), Positives = 18/64 (28%), Gaps = 3/64 (4%)
Query: 533 YNLGTGQGTSVLQLLRTFERVTGKPVPYIV---EARREGDIVSMYANTDLAQRELGWSAR 589
+NLGTG+ S + K + + + A+ +
Sbjct: 233 FNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPF 292
Query: 590 CTVK 593
TV
Sbjct: 293 KTVA 296
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 8/64 (12%), Positives = 18/64 (28%), Gaps = 3/64 (4%)
Query: 2 INKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIV---EARREGDIVSMYANTDLAQKELG 58
++ +NLGTG+ S + K + + + A+ +
Sbjct: 229 VSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGY 288
Query: 59 WSAR 62
Sbjct: 289 DKPF 292
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 3e-25
Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 11/163 (6%)
Query: 51 DLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 110
D++ ++ A + ID + H A + + ++P + YK N+ T N+LE K H V
Sbjct: 47 DVSNRDEIDRAVEKYSIDAIFHLAGI-LSAKGEKDPALAYKVNMNGTYNILEAAKQHRVE 105
Query: 111 QLVFSSSCTVYG-EPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLR 169
++V S+ V+G E + T ++G TK E + + + ++ SLR
Sbjct: 106 KVVIPSTIGVFGPETPKNKVPSITITRPR-TMFGVTKIAAELLGQYYYEKFG-LDVRSLR 163
Query: 170 YFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG 212
Y + +PT T+ + A+ + + +
Sbjct: 164 YPGIISYKA------EPTAGTTDYAVEIFYYAVKREK-YKCYL 199
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 9e-23
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLE 311
+ F + D+ +++ + K+ ID + H A + + ++P + YK N+ T N+LE
Sbjct: 39 GGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGI-LSAKGEKDPALAYKVNMNGTYNILE 97
Query: 312 VMKSHGVYQLVFSSSCTVYG-EPQFLPITEDHPT 344
K H V ++V S+ V+G E + T
Sbjct: 98 AAKQHRVEKVVIPSTIGVFGPETPKNKVPSITIT 131
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 4e-25
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQ 125
D+ V H A+ K+V S ++PL Y N + + +LL + S GV ++V S+C VYG+
Sbjct: 69 DVRLVYHLASHKSVPRSFKQPLDYLDN-VDSGRHLLALCTSVGVPKVVVGSTCEVYGQAD 127
Query: 126 FLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFN 172
LP ED P ++ Y +K +E + +A + +R+FN
Sbjct: 128 TLPTPEDSPLS-PRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFN 173
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 94.9 bits (237), Expect = 2e-21
Identities = 54/262 (20%), Positives = 95/262 (36%), Gaps = 51/262 (19%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKV-DFYSCDLVDKNRLGEIFAKHDIDCVIH 281
+V +D+ +F K V + DL D+ V H
Sbjct: 33 EVTVLDDLRV-----PPMIPPEGTGKFLEKPVLELEERDL------------SDVRLVYH 75
Query: 282 FAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITED 341
A+ K+V S ++PL Y N + + +LL + S GV ++V S+C VYG+ LP ED
Sbjct: 76 LASHKSVPRSFKQPLDYLDN-VDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPED 134
Query: 342 HPTGNIKNFYNLG--TGQGTSVLQLLRTFERVTGNKPVPY--IFYNLGTGQGTS------ 391
P + ++ Y + + +R + V F G G+
Sbjct: 135 SPL-SPRSPYAASKVGLE-----MVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRL 188
Query: 392 VLQLLRTFERVTGNKPVPYIFYNLGTGQGT----SVLQLLRTFERVTGKPVPYIFYNLGT 447
LL +P + G G+ + ++ + +P+P + N G+
Sbjct: 189 CANLLT-------RNELP-VE---GDGEQRRDFTYITDVVDKLVALANRPLPSV-VNFGS 236
Query: 448 GQGTSVLQLLRTFERVTGKPVP 469
GQ SV ++R + +
Sbjct: 237 GQSLSVNDVIRILQATSPAAEV 258
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 9e-07
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 533 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGW 586
N G+GQ SV ++R + + + R +I A+T L R++G
Sbjct: 232 VNFGSGQSLSVNDVIRILQATSPAAEV-ARKQPRPNEITEFRADTALQTRQIGE 284
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 1e-06
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 6 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGW 59
N G+GQ SV ++R + + + R +I A+T L +++G
Sbjct: 232 VNFGSGQSLSVNDVIRILQATSPAAEV-ARKQPRPNEITEFRADTALQTRQIGE 284
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 7e-24
Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 5/108 (4%)
Query: 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP 124
D++ + H A + E + +M NN + LL + +++SS YG
Sbjct: 114 GDVEAIFHEGACSSTTEWDGKYMM--DNNYQYSKELLHYCLEREI-PFLYASSAATYGGR 170
Query: 125 QFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFN 172
I + NV+G +K +E ++ + I+ RYFN
Sbjct: 171 TSDFIESREYEKPL-NVFGYSKFLFDEYVRQILPEAN-SQIVGFRYFN 216
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 2e-19
Identities = 53/299 (17%), Positives = 91/299 (30%), Gaps = 76/299 (25%)
Query: 202 IGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVHIGDTPCSIRAIEQFTGKK----VDFY 257
IGS + + G ++ +DN G K VD
Sbjct: 58 IGS--NI----VKALNDKGITDILVVDNLK------------------DGTKFVNLVDLN 93
Query: 258 SCDLVDK----NRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVM 313
D +DK ++ D++ + H A + E + +M NN + LL
Sbjct: 94 IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMM--DNNYQYSKELLHYC 151
Query: 314 KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVL---QLLRTFER 370
+ +++SS YG I + N + G S + +R
Sbjct: 152 LEREI-PFLYASSAATYGGRTSDFIESREYEKPL-NVF------GYSKFLFDEYVRQILP 203
Query: 371 VTGNKPVPYIFYNL-G-----TGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGT--- 421
++ V + ++N+ G G SV ++ + P +F G+
Sbjct: 204 EANSQIVGFRYFNVYGPREGHKGSMASV--AFHLNTQLNNGES-PKLFE--GSENFKRDF 258
Query: 422 --------SVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP-YI 471
L L V+G +NLGTG+ S + K YI
Sbjct: 259 VYVGDVADVNLWFLEN--GVSG------IFNLGTGRAESFQAVADATLAYHKKGQIEYI 309
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 10/64 (15%), Positives = 18/64 (28%), Gaps = 3/64 (4%)
Query: 533 YNLGTGQGTSVLQLLRTFERVTGKPVPYIV---EARREGDIVSMYANTDLAQRELGWSAR 589
+NLGTG+ S + K + + + A+ +
Sbjct: 280 FNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPF 339
Query: 590 CTVK 593
TV
Sbjct: 340 KTVA 343
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 9/66 (13%), Positives = 19/66 (28%), Gaps = 3/66 (4%)
Query: 2 INKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIV---EARREGDIVSMYANTDLAQKELG 58
++ +NLGTG+ S + K + + + A+ +
Sbjct: 276 VSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGY 335
Query: 59 WSARCT 64
T
Sbjct: 336 DKPFKT 341
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 1e-23
Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHF 282
V+ +DNF ++ H + + + F D+ D ++ +D V+H
Sbjct: 51 VVIGLDNF-STGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM--KGVDHVLHQ 107
Query: 283 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDH 342
AA+ +V S+ +P+ N+ +N+L K+ V +++S + YG+ LP E++
Sbjct: 108 AALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEEN 167
Query: 343 P 343
Sbjct: 168 I 168
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 3e-23
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 120
+ +D V+H AA+ +V S+ +P+ N+ +N+L K+ V +++S +
Sbjct: 95 EQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSST 154
Query: 121 YGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFN 172
YG+ LP E++ GN + Y TK+ E + ++ + + I LRYFN
Sbjct: 155 YGDHPALPKVEENI-GNPLSPYAVTKYVNEIYAQVYARTYG-FKTIGLRYFN 204
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 8e-07
Identities = 11/75 (14%), Positives = 21/75 (28%), Gaps = 5/75 (6%)
Query: 524 TGKPVPYIFYNLGTGQGTSVLQLLRTFERVTG-----KPVPYIVEARREGDIVSMYANTD 578
YN+ G T++ +L + R GD+ A+
Sbjct: 261 AKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVT 320
Query: 579 LAQRELGWSARCTVK 593
A L + ++
Sbjct: 321 KAIDLLKYRPNIKIR 335
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 5e-06
Identities = 11/63 (17%), Positives = 20/63 (31%), Gaps = 5/63 (7%)
Query: 3 NKFYNLGTGQGTSVLQLLRTFERVTG-----KPVPYIVEARREGDIVSMYANTDLAQKEL 57
+ YN+ G T++ +L + R GD+ A+ A L
Sbjct: 267 DNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLL 326
Query: 58 GWS 60
+
Sbjct: 327 KYR 329
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 4e-23
Identities = 66/414 (15%), Positives = 116/414 (28%), Gaps = 135/414 (32%)
Query: 202 IGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVHIGDTPCSIRAIEQFTGKK-------- 253
+GS + E G +V +DN + +K
Sbjct: 44 VGS--NL----VKRLLELGVNQVHVVDNL------------------LSAEKINVPDHPA 79
Query: 254 VDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVM 313
V F + D L + ++D V H A S+ +PL ++NN + T+ L E +
Sbjct: 80 VRFSETSITDDALLASLQDEYDY--VFHLATYHGNQSSIHDPLADHENNTLTTLKLYERL 137
Query: 314 KSH-GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT 372
K + ++V+S++ E F T V+
Sbjct: 138 KHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDI------------------------VS 173
Query: 373 GNKPV-PYIFYNLGTGQGTSVL---QLLRTFERVTGNKPVPY----IFYNLGTGQGTSVL 424
+ PY S + + + +P G G+
Sbjct: 174 LHNNDSPY---------SMSKIFGEFYSVYYHKQHQ---LPTVRARFQNVYGPGEILGAG 221
Query: 425 QLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGT--- 481
+ T V P F + + L+ G P+P + G T
Sbjct: 222 RWRGTPATVWRNVTP-TF----------IYKALK------GMPLP-LE---NGGVATRDF 260
Query: 482 -SVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQG 540
V + P YN+ +G+ TS+ L +TG
Sbjct: 261 IFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNTELDR-------- 312
Query: 541 TSVLQLLRTFERVTGKPVPYIVEARREGDIV-SMYANTDLAQRELGWSARCTVK 593
+R D + + + A+RELG+SA ++
Sbjct: 313 ----------------------LPKRPWDNSGKRFGSPEKARRELGFSADVSID 344
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 2e-19
Identities = 36/170 (21%), Positives = 60/170 (35%), Gaps = 17/170 (10%)
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCT 119
A + D V H A S+ +PL ++NN + T+ L E +K + ++V+S++
Sbjct: 94 ASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGC 153
Query: 120 VYGEPQFLPITEDHPTGNIKNV-----YGKTKHFIEEMLKDLSKAHKEWNIISLRYFN-- 172
E F T + Y +K F E K H+ + R+ N
Sbjct: 154 SIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQ-LPTVRARFQNVY 212
Query: 173 -PVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGT 221
P +GR P + N+ P A+ P + G
Sbjct: 213 GPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMP-LPLEN------GGV 255
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 3e-08
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 6 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIV-SMYANTDLAQKELGWSARCT 64
YN+ +G+ TS+ L +TG +R D + + + A++ELG+SA +
Sbjct: 283 YNIASGKETSIADLATKINEITGNNTELDRLPKRPWDNSGKRFGSPEKARRELGFSADVS 342
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 97.7 bits (244), Expect = 1e-22
Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 8/152 (5%)
Query: 33 YIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKN 92
I + + + + H I + AA+ + + P +
Sbjct: 35 DIRKLNTDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAAL-LSATAEKNPAFAWDL 93
Query: 93 NLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEM 152
N+ + ++L + K+ + ++ + SS V+G T + VYG +K E
Sbjct: 94 NMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERW 153
Query: 153 LKDLSKAHKEWNI--ISLRYFNPVG--AHPSG 180
+ H + + S+RY + P G
Sbjct: 154 CEYY---HNIYGVDVRSIRYPGLISWSTPPGG 182
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 97.7 bits (244), Expect = 1e-22
Identities = 22/129 (17%), Positives = 48/129 (37%), Gaps = 9/129 (6%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHF 282
K+ +N + S IR + F + +D N++ + H I +
Sbjct: 24 KLYGTENVIAS--------DIRKLNTDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLM 75
Query: 283 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDH 342
AA+ + + P + N+ + ++L + K+ + ++ + SS V+G T +
Sbjct: 76 AAL-LSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQY 134
Query: 343 PTGNIKNFY 351
Y
Sbjct: 135 TIMEPSTVY 143
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 2e-21
Identities = 28/138 (20%), Positives = 50/138 (36%), Gaps = 20/138 (14%)
Query: 40 EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPL-MYYKNNLIATI 98
+ D+ D D ++H S+++P + N+I
Sbjct: 49 QCDL------ADANA-----VNAMVAGCDGIVHLGG-----ISVEKPFEQILQGNIIGLY 92
Query: 99 NLLEVMKSHGVYQLVFSSSCTVYGE-PQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLS 157
NL E ++HG ++VF+SS G PQ + D P +YG +K F E + +
Sbjct: 93 NLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPA-RPDGLYGVSKCFGENLARMYF 151
Query: 158 KAHKEWNIISLRYFNPVG 175
+ +R +
Sbjct: 152 DKFGQ-ETALVRIGSCTP 168
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 8e-19
Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 23/125 (18%)
Query: 222 GKVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIH 281
+++ + + G + CDL D N + + A D ++H
Sbjct: 27 AEILRLADLSPLDPAGP--------------NEECVQCDLADANAVNAMVA--GCDGIVH 70
Query: 282 FAAVKAVGESMQEPL-MYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE-PQFLPIT 339
S+++P + N+I NL E ++HG ++VF+SS G PQ +
Sbjct: 71 LGG-----ISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLG 125
Query: 340 EDHPT 344
D P
Sbjct: 126 PDVPA 130
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 6e-19
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP 124
D + H AAV +M + K N A +NLLE+ +S +++++SS VYG
Sbjct: 89 LHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKA-KVIYASSAGVYGNT 145
Query: 125 QFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFN 172
+ P + +NVYG +K ++E + + + LRYFN
Sbjct: 146 K-APNVVGKN-ESPENVYGFSKLCMDEFVL---SHSNDNVQVGLRYFN 188
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 7e-19
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 202 IGSKPHFTVFGADYETEDGTG-KVVAIDNFVN-SVHIGDTPCSIRAIEQFTGKKVDFYSC 259
+GS + A + E+ KVV +D F + ++ + P S+ + G K + +
Sbjct: 22 VGS--NL----AFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75
Query: 260 DLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 319
D+ + L K D + H AAV +M + K N A +NLLE+ +S
Sbjct: 76 DINNPLDL-RRLEKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKA- 131
Query: 320 QLVFSSSCTVYGEPQFLPITEDHP 343
+++++SS VYG + P
Sbjct: 132 KVIYASSAGVYGNTK-APNVVGKN 154
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 8/61 (13%), Positives = 22/61 (36%)
Query: 533 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTV 592
YN+G Q S +++ + G ++ A+ + +L ++ +
Sbjct: 251 YNVGYSQARSYNEIVSILKEHLGDFKVTYIKNPYAFFQKHTQAHIEPTILDLDYTPLYDL 310
Query: 593 K 593
+
Sbjct: 311 E 311
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 8/59 (13%), Positives = 20/59 (33%)
Query: 6 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT 64
YN+G Q S +++ + G ++ A+ + +L ++
Sbjct: 251 YNVGYSQARSYNEIVSILKEHLGDFKVTYIKNPYAFFQKHTQAHIEPTILDLDYTPLYD 309
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 1e-14
Identities = 32/159 (20%), Positives = 60/159 (37%), Gaps = 16/159 (10%)
Query: 62 RCTHDIDCVIHFAAVKAVGESMQE-PLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 120
+ T +D V + AA +Q + NN + + N++E + +G+ + ++SS +
Sbjct: 89 KVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACI 148
Query: 121 YGEPQFLPITED-------HPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNP 173
Y E + L T P ++ +G K EE+ K +K R+ N
Sbjct: 149 YPEFKQLETTNVSLKESDAWPAE-PQDAFGLEKLATEELCKHYNKDFG-IECRIGRFHNI 206
Query: 174 VGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG 212
G P G K+ + + F ++G
Sbjct: 207 YG--PFGTWKGGREKAPAAFC---RKAQTSTDR-FEMWG 239
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 5e-09
Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 255 DFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQE-PLMYYKNNLIATINLLEVM 313
+F+ DL ++ +D V + AA +Q + NN + + N++E
Sbjct: 75 EFHLVDLRVMENCLKVT--EGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAA 132
Query: 314 KSHGVYQLVFSSSCTVYGEPQFLPITEDH 342
+ +G+ + ++SS +Y E + L T
Sbjct: 133 RINGIKRFFYASSACIYPEFKQLETTNVS 161
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 71.9 bits (176), Expect = 1e-13
Identities = 18/110 (16%), Positives = 44/110 (40%), Gaps = 20/110 (18%)
Query: 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQ 125
D ++H A V + + N+ ++L+++ + + SS ++
Sbjct: 46 KADFIVHLAGVN----RPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSS-SIQATQ- 99
Query: 126 FLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVG 175
D+P YG++K E++L++ ++ + + R+ N G
Sbjct: 100 ------DNP-------YGESKLQGEQLLREYAEEYGN-TVYIYRWPNLFG 135
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 67.3 bits (164), Expect = 4e-12
Identities = 31/220 (14%), Positives = 69/220 (31%), Gaps = 29/220 (13%)
Query: 263 DKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLV 322
+ L D ++H A V + + N+ ++L+++ + +
Sbjct: 36 KEEELESALL--KADFIVHLAGVN----RPEHDKEFSLGNVSYLDHVLDILTRNTKKPAI 89
Query: 323 FSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFY 382
SS ++ D+P G K G+ QLLR + GN Y +
Sbjct: 90 LLSS-SIQATQ-------DNPYGESKL-----QGE-----QLLREYAEEYGNTVYIYRWP 131
Query: 383 NL-GTGQGTSVLQLLRTF-ERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP--V 438
NL G + ++ TF ++ N+ + N V ++ +R +
Sbjct: 132 NLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRN-VELTLNYVDDIVAEIKRAIEGTPTI 190
Query: 439 PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTG 478
+ ++ +++ + + L
Sbjct: 191 ENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNL 230
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 1e-12
Identities = 25/159 (15%), Positives = 46/159 (28%), Gaps = 18/159 (11%)
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 120
R +D VI A + + L T V ++++ S
Sbjct: 72 ERALRGLDGVIFSAGY--YPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYA 129
Query: 121 YGE-PQFLPITEDHP---TGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGA 176
PQ LP E + K+ Y K ++E ++ ++ I
Sbjct: 130 MPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIG---------- 179
Query: 177 HPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADY 215
P +GE T + + + G H+ +
Sbjct: 180 IPGMVLGELDIGPTTGRV--ITAIGNGEMTHYVAGQRNV 216
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 9e-11
Identities = 16/108 (14%), Positives = 34/108 (31%), Gaps = 5/108 (4%)
Query: 246 IEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIA 305
I++ + + +++D L +D VI A + + L
Sbjct: 50 IQRLAYLEPECRVAEMLDHAGLERALR--GLDGVIFSAGY--YPSRPRRWQEEVASALGQ 105
Query: 306 TINLLEVMKSHGVYQLVFSSSCTVYGE-PQFLPITEDHPTGNIKNFYN 352
T V ++++ S PQ LP E ++ + +
Sbjct: 106 TNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKS 153
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357 | Back alignment and structure |
|---|
Score = 66.4 bits (162), Expect = 5e-12
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Query: 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLL 310
+ D+ D+N+L E + + V H AA V S EP+ Y N++ T+ LL
Sbjct: 56 ADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLL 115
Query: 311 E-VMKSHGVYQLVFSSSCTVYGEPQFL-PITEDHPTGNIKNF 350
E + GV +V +S Y +++ E+ G +
Sbjct: 116 EAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPY 157
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 4e-06
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLE-VMKSHGVYQLVFSSSCTVYGE 123
+ V H AA V S EP+ Y N++ T+ LLE + GV +V +S Y
Sbjct: 79 FQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDN 138
Query: 124 PQFL-PITEDHPTG 136
+++ E+ G
Sbjct: 139 KEWIWGYRENEAMG 152
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 1e-11
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLE 311
+F D+ +KN + + K+ D H A A+ S+ P M ++ N+ T+NLLE
Sbjct: 50 GNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLE 109
Query: 312 VMKSHGV-YQLVFSSSCTVYGEPQFLPITED 341
++ + +++SS+ VYG+ + E
Sbjct: 110 AVRQYNSNCNIIYSSTNKVYGDLEQYKYNET 140
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 7e-08
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV-YQLVFSSSCTVYGE 123
+ D H A A+ S+ P M ++ N+ T+NLLE ++ + +++SS+ VYG+
Sbjct: 72 YMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGD 131
Query: 124 PQFLPITEDHPTGNIKNVYGKTKHFIEE 151
L + + T K + E
Sbjct: 132 ---LEQYKYNETETRYTCVDKPNGYDES 156
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 1e-09
Identities = 22/127 (17%), Positives = 45/127 (35%), Gaps = 8/127 (6%)
Query: 55 KELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVF 114
W D V+ A+ E + PL ++ + + ++ + +++F
Sbjct: 56 IHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIF 114
Query: 115 SSSCTVYGEPQFLPITEDH------PTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISL 168
S+ VYG EDH P + +Y +K ++ ++ +
Sbjct: 115 PSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG-LQFTLF 173
Query: 169 RYFNPVG 175
R FN +G
Sbjct: 174 RPFNWMG 180
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 8e-09
Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 15/126 (11%)
Query: 218 EDGTGKVVAIDNFVNSVHIGDTPCSIRAIEQFTG-KKVDFYSCDLVDKNRLGEIFAKHDI 276
+ +V +D AI +F F D+ + E K
Sbjct: 22 REDHYEVYGLDIG------------SDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-KC 68
Query: 277 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL 336
D V+ A+ E + PL ++ + + ++ + +++F S+ VYG
Sbjct: 69 DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDK 127
Query: 337 PITEDH 342
EDH
Sbjct: 128 YFDEDH 133
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQ 125
++D + H A+ + M P+ K N I T+N+L + K G L+ S+S VYG+P+
Sbjct: 91 EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSE-VYGDPE 149
Query: 126 FLPITED-----HPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVG--AHP 178
P +ED +P G + Y + K E M K + R FN G H
Sbjct: 150 VHPQSEDYWGHVNPIG-PRACYDEGKRVAETMCYAYMKQEGV-EVRVARIFNTFGPRMHM 207
Query: 179 S-GRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG 212
+ GR+ + ++ Q A+ +P TV+G
Sbjct: 208 NDGRV----------VSNFILQ-ALQGEP-LTVYG 230
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 1e-07
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 224 VVAIDNFVNSVHIGDTPCSIRAIEQFTG-KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHF 282
V +DNF R +E + G + + + D+V+ + ++D + H
Sbjct: 54 VTVVDNFFTG--------RKRNVEHWIGHENFELINHDVVEPLYI-------EVDQIYHL 98
Query: 283 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITED 341
A+ + M P+ K N I T+N+L + K G L+ S+S VYG+P+ P +ED
Sbjct: 99 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSE-VYGDPEVHPQSED 156
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 3e-09
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 256 FYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKS 315
F ++ + L + + D+ +++FAA V S++ P+ +Y N+I T+ LLE++K
Sbjct: 79 FVKGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKK 138
Query: 316 HGVYQLVFSSSCTVYG----EPQFLPITEDHP 343
+ +LV S+ VYG +F TE+ P
Sbjct: 139 YPHIKLVQVSTDEVYGSLGKTGRF---TEETP 167
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 5e-05
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 64 THDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG- 122
D+ +++FAA V S++ P+ +Y N+I T+ LLE++K + +LV S+ VYG
Sbjct: 96 ERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGS 155
Query: 123 ---EPQFLPITEDHP 134
+F TE+ P
Sbjct: 156 LGKTGRF---TEETP 167
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 7e-09
Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Query: 59 WSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSC 118
W D ++ A+ +++PL ++ + A + ++ +G LVF S+
Sbjct: 84 WVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGK-HLVFPSTS 142
Query: 119 TVYG---EPQFLPITEDHPTGNIKN---VYGKTKHFIEEMLKDLSKAHKEWNIISLRYFN 172
VYG + QF P G I +Y +K ++ ++ + + R FN
Sbjct: 143 EVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGMEGLNFTLF--RPFN 200
Query: 173 PVG 175
+G
Sbjct: 201 WIG 203
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 8e-08
Identities = 25/134 (18%), Positives = 49/134 (36%), Gaps = 18/134 (13%)
Query: 218 EDGTGKVVAIDNFVNSV-HIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDI 276
E +V +D + + + ++ F+ D+ E K
Sbjct: 46 ETTDWEVFGMDMQTDRLGDLVKHE------------RMHFFEGDITINKEWVEYHVK-KC 92
Query: 277 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG---EP 333
D ++ A+ +++PL ++ + A + ++ +G LVF S+ VYG +
Sbjct: 93 DVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGK-HLVFPSTSEVYGMCADE 151
Query: 334 QFLPITEDHPTGNI 347
QF P G I
Sbjct: 152 QFDPDASALTYGPI 165
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.9 bits (131), Expect = 7e-08
Identities = 69/469 (14%), Positives = 149/469 (31%), Gaps = 111/469 (23%)
Query: 11 GQGTSVL--QLLRTFERVTGKP--VPYIV--EARREGDIVSMYANTDLAQKELGWSARCT 64
G G + + + +++ + ++ ++ M L Q + W++R
Sbjct: 160 GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL-LYQIDPNWTSRSD 218
Query: 65 HDIDCVIHFAAVK-AVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 123
H + + +++ + ++ Y+N L+ + LL V ++ + F+ SC +
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKP--YENCLL--V-LLNV-QNAKAWN-AFNLSCKI--- 268
Query: 124 PQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFN------P---V 174
L T + + T ++ L+ E + L+Y + P +
Sbjct: 269 ---LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD--EVKSLLLKYLDCRPQDLPREVL 323
Query: 175 GAHPS--GRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG-----KVVAI 227
+P I E + V T+ + + +++
Sbjct: 324 TTNPRRLSIIAES-IRDGLATWDNWKHV--NCDKLTTIIESSLNVLEPAEYRKMFDRLSV 380
Query: 228 DNFVNSVHIGDTPCSIRAI----------EQFTGKKVDFYSCDLVDKNRLGEIFAKHDID 277
F S HI P + ++ K YS LV+K + I
Sbjct: 381 --FPPSAHI---PTILLSLIWFDVIKSDVMVVVNKLHK-YS--LVEKQPKESTISIPSIY 432
Query: 278 C----------VIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLV----- 322
+H +++ + P + ++LI L + SH + L
Sbjct: 433 LELKVKLENEYALH----RSIVDHYNIPKTFDSDDLIP-PYLDQYFYSHIGHHLKNIEHP 487
Query: 323 --FSSSCTVYGEPQFLP--ITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER-VTGNKPV 377
+ V+ + +FL I D N +G + LQ L+ ++ + N P
Sbjct: 488 ERMTLFRMVFLDFRFLEQKIRHDSTAWN-------ASGSILNTLQQLKFYKPYICDNDPK 540
Query: 378 PYIFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQL 426
++ + F +P I NL + T +L++
Sbjct: 541 Y-----------ERLVNAILDF--------LPKIEENLICSKYTDLLRI 570
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 5e-04
Identities = 80/607 (13%), Positives = 175/607 (28%), Gaps = 193/607 (31%)
Query: 11 GQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCV 70
+V LR F + +++E ++V + L + +
Sbjct: 56 MSKDAVSGTLRLFW---------TLLSKQE-EMVQKFVEEVL-RINYKF----------- 93
Query: 71 IHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPIT 130
+ + ++P M + I + L + Q VF+ V +L +
Sbjct: 94 ----LMSPIKTEQRQPSMMTRM-YIEQRDRL-----YNDNQ-VFAKY-NVSRLQPYLKLR 141
Query: 131 ----EDHPTGNIKNVYG-----KTKHFIEEMLKDLS-KAHKEWNI--ISLRYFNPVGAHP 178
E P N+ + G KT ++ + ++ I ++L+ N P
Sbjct: 142 QALLELRPAKNVL-IDGVLGSGKTW-VALDVCLSYKVQCKMDFKIFWLNLKNCN----SP 195
Query: 179 SGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKV---VAIDNFVNSVH 235
+ E K I P + S ++ + + N +
Sbjct: 196 ETVL-EMLQKLLYQIDPNWTSRSDHSSN------IKLRIHSIQAELRRLLKSKPYENCLL 248
Query: 236 IGDTPCSIRAIEQFTGK-KV----------DFYSCDL-----VDKNRLG-------EIFA 272
+ + +A F K+ DF S +D + + +
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308
Query: 273 K---HDID------CVIHFAAVKAVGESMQEPLM---YYK-------NNLI-ATINLLE- 311
K + + + ES+++ L +K +I +++N+LE
Sbjct: 309 KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEP 368
Query: 312 -VMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGT-SVLQLLRTF- 368
+ + +V+ P I PT + + V+ L +
Sbjct: 369 AEYRKM--FD-----RLSVF--PPSAHI----PTILLSLIWFDVIKSDVMVVVNKLHKYS 415
Query: 369 --ERVTGNKPVPYIFYNL-----GTGQGTSVL--------QLLRTFERVTGNKPVP---- 409
E+ K ++ + L + +TF+ + +P
Sbjct: 416 LVEK--QPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFD---SDDLIPPYLD 470
Query: 410 -YIF----YNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNL---------------GTGQ 449
Y + ++L + + L R +F + +G
Sbjct: 471 QYFYSHIGHHLKNIEHPERMTLFRM-----------VFLDFRFLEQKIRHDSTAWNASGS 519
Query: 450 GTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQ 509
+ LQ L+ ++ YI N + ++ + F +P I NL +
Sbjct: 520 ILNTLQQLKFYKP-------YICDN--DPKYERLVNAILDF-------LPKIEENLICSK 563
Query: 510 GTSVLQL 516
T +L++
Sbjct: 564 YTDLLRI 570
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* Length = 361 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 5e-07
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 256 FYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKS 315
F D+ D + IF ++ D V+H AA V S+ P + + N++ T LLEV +
Sbjct: 54 FEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARK 113
Query: 316 H 316
+
Sbjct: 114 Y 114
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 7e-07
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 256 FYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKS 315
F D+ D L D ++HFAA V S+ ++ + N+ T LL+
Sbjct: 59 FVHGDIRDAGLLARELRGVDA--IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVD 116
Query: 316 HGVYQLVFSSSCTVYG---EPQFLPITEDHP 343
GV ++V S+ VYG + TE P
Sbjct: 117 AGVGRVVHVSTNQVYGSIDSGSW---TESSP 144
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 6e-05
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG-- 122
+D ++HFAA V S+ ++ + N+ T LL+ GV ++V S+ VYG
Sbjct: 75 RGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSI 134
Query: 123 -EPQFLPITEDHP 134
+ TE P
Sbjct: 135 DSGSW---TESSP 144
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 1e-06
Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 6/91 (6%)
Query: 254 VDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVM 313
V D+ + L I + +++ A + Y + + N L +
Sbjct: 43 VQTLIADVTRPDTLASIVHLRP-EILVYCVAASEYSDEH-----YRLSYVEGLRNTLSAL 96
Query: 314 KSHGVYQLVFSSSCTVYGEPQFLPITEDHPT 344
+ + + F SS VYG+ + ED P
Sbjct: 97 EGAPLQHVFFVSSTGVYGQEVEEWLDEDTPP 127
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
Query: 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL 127
+ +++ A + Y + + N L ++ + + F SS VYG+
Sbjct: 65 EILVYCVAASEYSDEH-----YRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEE 119
Query: 128 PITEDHPT 135
+ ED P
Sbjct: 120 WLDEDTPP 127
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 49.0 bits (116), Expect = 2e-06
Identities = 31/204 (15%), Positives = 52/204 (25%), Gaps = 32/204 (15%)
Query: 13 GTSVL-QLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCT---HDID 68
G S+ L V ARR + Q ++ +
Sbjct: 14 GNSLAEILPLADTPGGPWKV--YGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLT 71
Query: 69 CVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMK--SHGVYQLVFSSSCTVY----- 121
V H + + N N+L+ + + + + Y
Sbjct: 72 DVTHVFY--VTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFE 129
Query: 122 ----GEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAH 177
E P TED P N Y E+++ + + + R N G
Sbjct: 130 SYGKIESHDPPYTEDLPRLKYMNFYYDL----EDIMLEEVEKKEGLTWSVHRPGNIFGFS 185
Query: 178 PSGRIGEDPTKSFTNIMPYLAQVA 201
P S N++ L A
Sbjct: 186 P---------YSMMNLVGTLCVYA 200
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 44.3 bits (104), Expect = 6e-05
Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 15/110 (13%)
Query: 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEV 312
+++ CD+ D + + + V H + + N N+L+
Sbjct: 49 PINYVQCDISDPDDSQAKLS--PLTDVTHVFY--VTWANRSTEQENCEANSKMFRNVLDA 104
Query: 313 MK--SHGVYQLVFSSSCTVY---------GEPQFLPITEDHPTGNIKNFY 351
+ + + + Y E P TED P NFY
Sbjct: 105 VIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY 154
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 247 EQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIAT 306
+F ++ F+ D+ D RL +A +D IH AA+K V + PL K N++
Sbjct: 65 MEFNDPRMRFFIGDVRDLERL--NYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGA 122
Query: 307 INLLEVMKSHGVYQLVFSSS 326
N++ + + Q++ S+
Sbjct: 123 SNVINACLKNAISQVIALST 142
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 4e-06
Identities = 20/98 (20%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLE 311
V+ S D++D R+ ++ + D + H AA +V +S + N+ T+++L+
Sbjct: 51 PNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLD 110
Query: 312 VMKSHG----VYQLVFSSSCTVYG--EPQFLPITEDHP 343
++ + S YG P+ P++E++
Sbjct: 111 AVRDSNLDCRILT---IGSSEEYGMILPEESPVSEENQ 145
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 7e-06
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 256 FYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKS 315
F D+ D + E+ K D V+H AA V S+ P ++ +N+I T LLE ++
Sbjct: 58 FVKGDVADYELVKELVRKVDG--VVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRR 115
Query: 316 HGV-YQLVFSSSCTVYG---EPQFLPITEDHP 343
+ V S+ VYG + F TE+
Sbjct: 116 ENPEVRFVHVSTDEVYGDILKGSF---TENDR 144
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 46.5 bits (110), Expect = 2e-05
Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 20/123 (16%)
Query: 51 DLAQKELGWS----ARCTHDIDCVIHFAA-VKAVGESMQEPLMYYKNNLIATINLLEVMK 105
D ++ +LG R +D ++ AA V A + N+ T L+ +
Sbjct: 148 DKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFP-----YHELFGPNVAGTAELIRIAL 202
Query: 106 SHGVYQLVFSSSCTVYGEPQFLPITEDHPT----------GNIKNVYGKTKHFIEEMLKD 155
+ + + S+ V + TED G YG +K E +L++
Sbjct: 203 TTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLRE 262
Query: 156 LSK 158
+
Sbjct: 263 AND 265
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 8e-04
Identities = 18/113 (15%), Positives = 39/113 (34%), Gaps = 12/113 (10%)
Query: 253 KVDFYSCDLVDKNRLG---EIFAK--HDIDCVIHFAA-VKAVGESMQEPLMYYKNNLIAT 306
+++ + D + LG ++ + +D ++ AA V A + N+ T
Sbjct: 141 RLEVVAGDK-SEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFP-----YHELFGPNVAGT 194
Query: 307 INLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGT 359
L+ + + + + S+ V + TED I + G
Sbjct: 195 AELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAG 247
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 2e-05
Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 242 SIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKN 301
++ AI G +V+ D+ D + ++ AK D ++H+AA S+ +P +
Sbjct: 47 NLEAIL---GDRVELVVGDIADAELVDKLAAKADA--IVHYAAESHNDNSLNDPSPFIHT 101
Query: 302 NLIATINLLEVMKSHG----------VY-QLVFSSSCTVYGEPQFLPITEDHP 343
N I T LLE + + VY L +GE T +
Sbjct: 102 NFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETN 154
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 19/129 (14%), Positives = 40/129 (31%), Gaps = 12/129 (9%)
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVF-SSSCT 119
D VI + + + + +++ +K GV + + + +
Sbjct: 62 CEVCKGADAVISAFNPGWNNPDIYDE------TIKVYLTIIDGVKKAGVNRFLMVGGAGS 115
Query: 120 VYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHK-EWNIIS-LRYFNPVGAH 177
++ P + +N+ K E L L K + +W S P
Sbjct: 116 LFIAPGLRLMDSGEVP---ENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRT 172
Query: 178 PSGRIGEDP 186
R+G+D
Sbjct: 173 GRYRLGKDD 181
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 11/97 (11%), Positives = 31/97 (31%), Gaps = 9/97 (9%)
Query: 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEV 312
+ D+ + + E+ D VI + + + + +++
Sbjct: 47 HLKVKKADVSSLDEVCEVCKGADA--VISAFNPGWNNPDIYDE------TIKVYLTIIDG 98
Query: 313 MKSHGVYQLVF-SSSCTVYGEPQFLPITEDHPTGNIK 348
+K GV + + + +++ P + NI
Sbjct: 99 VKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENIL 135
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 4e-05
Identities = 29/179 (16%), Positives = 61/179 (34%), Gaps = 24/179 (13%)
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 120
A+ H +D +I+ + G+S K +L + L++ + V + + S+
Sbjct: 58 AKQLHGMDAIIN--VSGSGGKS------LLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS 109
Query: 121 YGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLK---DLSKAHKEWNIISLRYFNPVGAH 177
+++ D Y KHF + L +L ++ II
Sbjct: 110 LQPEKWIGAGFDALKD-----YYIAKHFADLYLTKETNL-----DYTIIQPGAL--TEEE 157
Query: 178 PSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVV-AIDNFVNSVH 235
+G I + S +N + +A G +G + A+++ + H
Sbjct: 158 ATGLIDINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGKTAIKEALESLLEHHH 216
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 17/92 (18%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL 127
D V+ A+ E + PL ++ + + ++ + +++F S+ VYG
Sbjct: 384 DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDK 442
Query: 128 PITEDH------PTGNIKNVYGKTKHFIEEML 153
EDH P + +Y +K ++ ++
Sbjct: 443 YFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 3e-04
Identities = 34/142 (23%), Positives = 52/142 (36%), Gaps = 19/142 (13%)
Query: 9 GTGQ-GTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDI 67
+GQ G + +LL V ++ + D+ TD + E
Sbjct: 8 ASGQLGIELSRLLSERHEVIKVYNSSEIQGGYKLDL------TDFPRLE---DFIIKKRP 58
Query: 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY---GEP 124
D +I+ AA+ V + E YK N A +++ K Y +V S T Y GE
Sbjct: 59 DVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSY-IVHIS--TDYVFDGEK 115
Query: 125 QFLPITEDHPTGNIKNVYGKTK 146
E+ N N YG +K
Sbjct: 116 G--NYKEEDIP-NPINYYGLSK 134
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 8e-04
Identities = 19/68 (27%), Positives = 28/68 (41%)
Query: 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLE 311
+ Y DL D RL + K D +I+ AA+ V + E YK N A +++
Sbjct: 34 EIQGGYKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVR 93
Query: 312 VMKSHGVY 319
K Y
Sbjct: 94 AGKVIDSY 101
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 4e-04
Identities = 43/161 (26%), Positives = 62/161 (38%), Gaps = 34/161 (21%)
Query: 9 GTGQ-GTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDI 67
GQ G + + L+ GK V I ++ DI T++
Sbjct: 20 ANGQLGREIQKQLK------GKNVEVIPTDVQDLDI------TNVLAVN---KFFNEKKP 64
Query: 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV--------YQLVFSSSCT 119
+ VI+ AA AV + ++ + YK N I NL S G Y VF
Sbjct: 65 NVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDY--VFD---- 118
Query: 120 VYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH 160
GE + PITE N ++ YGKTK E +K L+ +
Sbjct: 119 --GEAK-EPITEFDEV-NPQSAYGKTKLEGENFVKALNPKY 155
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 8e-04
Identities = 32/161 (19%), Positives = 56/161 (34%), Gaps = 34/161 (21%)
Query: 9 GTGQ-GTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDI 67
GQ G + + L + ++ DI T+++Q +
Sbjct: 13 ANGQLGKQLQEELN------PEEYDIYPFDKKLLDI------TNISQVQ---QVVQEIRP 57
Query: 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV--------YQLVFSSSCT 119
+IH AA V ++ +E + Y N I N+ + G Y VF
Sbjct: 58 HIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDY--VFQ---- 111
Query: 120 VYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH 160
G+ E H N+YG +K+ E+ +K+L +
Sbjct: 112 --GDRP-EGYDEFHNP-APINIYGASKYAGEQFVKELHNKY 148
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 600 | |||
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.96 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.96 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.96 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.95 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.95 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.95 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.95 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.95 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.95 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.95 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.95 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.94 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.94 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.94 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.94 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.94 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.94 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.94 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.94 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.94 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.94 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.94 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.94 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.93 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.93 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.93 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.93 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.93 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.93 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.93 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.93 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.92 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.92 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.92 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.92 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.92 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.92 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.92 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.92 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.92 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.92 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.92 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.92 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.92 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.91 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.91 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.91 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.91 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.91 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.91 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.91 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.91 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.9 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.9 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.9 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.9 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.9 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.9 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.9 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.9 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.9 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.89 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.89 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.89 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.89 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.89 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.89 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.89 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.89 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.89 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.89 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.89 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.88 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.88 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.88 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.88 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.88 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.88 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.88 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.88 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.88 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.88 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.87 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.87 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.87 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.87 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.87 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.87 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.87 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.87 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.86 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.86 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.86 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.86 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.85 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.85 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.85 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.84 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.84 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.84 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.83 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.83 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.83 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.83 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.82 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.82 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.81 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.8 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.8 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.79 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.79 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.79 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.79 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.79 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.78 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.77 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.77 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.77 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.77 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.76 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.76 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.75 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.75 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.75 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.75 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.74 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.74 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.74 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.74 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.72 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.72 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.72 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.71 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.7 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.68 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.67 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.67 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.64 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.64 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.62 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.62 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.61 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.6 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.6 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.59 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.58 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.54 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.54 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.53 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.52 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.51 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.51 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.51 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.5 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.5 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.48 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.48 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.48 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.48 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.48 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.48 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.47 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.47 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.46 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.46 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.45 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.45 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.45 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.45 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.44 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.44 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.44 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.44 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.44 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.44 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.44 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.44 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.44 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.43 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.43 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.43 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.43 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.43 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.42 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.42 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.42 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.42 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.42 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.42 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.42 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.42 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.41 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.41 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.41 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.41 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.41 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.41 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.41 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.41 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.41 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.41 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.41 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.4 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.4 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.4 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.4 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.4 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.4 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.4 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.4 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.4 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.4 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.4 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.4 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.4 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.39 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.39 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.39 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.39 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.39 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.39 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.39 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.39 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.39 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.39 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.39 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.39 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.38 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.38 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.38 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.38 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.38 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.38 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.38 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.38 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.38 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.38 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.38 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.38 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.38 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.38 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.38 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.37 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.37 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.37 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.37 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.37 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.37 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.37 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.37 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.36 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.36 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.36 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.36 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.36 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.36 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.36 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.36 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.36 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.36 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.36 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.36 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.35 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.35 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.35 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.35 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.35 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.35 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.35 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.35 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.35 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.35 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.35 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.35 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.35 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.35 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.35 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.35 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.35 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.34 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.34 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.34 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.34 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.34 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.34 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.34 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.34 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.34 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.34 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.34 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.33 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.33 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.33 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.33 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.33 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.33 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.33 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.33 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.33 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.33 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.33 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.33 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.32 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.32 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.32 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.32 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.32 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.32 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.32 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.32 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.32 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.32 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.31 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.31 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.31 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.31 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.31 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.31 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.3 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.3 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.3 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.3 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.3 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.3 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.3 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.3 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.3 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.3 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.29 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.29 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.29 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.29 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.29 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.29 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.28 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.28 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.28 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.28 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.27 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.27 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.27 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.27 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.27 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.26 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.26 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.26 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.26 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.26 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.26 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.26 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.26 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.25 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.25 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.25 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.24 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.24 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.24 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.24 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.24 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.24 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.24 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.23 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.23 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.23 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.23 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.23 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.22 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.22 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.21 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.21 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.21 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.21 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.2 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.2 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.2 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.19 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.19 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.19 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.18 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.17 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.16 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.15 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.13 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.11 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.09 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.09 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.08 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.07 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.06 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.05 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.04 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.02 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.0 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 98.99 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 98.97 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 98.96 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.95 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 98.94 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 98.92 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 98.92 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 98.91 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.9 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 98.88 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.87 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 98.86 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.86 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 98.86 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 98.85 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 98.85 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 98.84 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 98.84 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.84 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 98.83 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 98.82 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 98.82 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 98.82 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 98.81 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 98.81 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 98.8 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 98.79 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 98.79 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 98.78 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 98.78 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 98.78 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 98.78 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 98.78 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 98.78 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 98.77 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 98.77 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 98.76 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 98.75 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 98.74 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 98.73 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 98.73 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 98.73 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 98.72 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 98.72 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 98.72 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 98.72 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 98.71 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.71 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 98.7 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 98.7 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 98.7 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 98.7 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 98.69 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 98.69 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 98.68 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 98.67 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 98.67 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 98.67 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 98.67 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 98.67 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 98.67 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 98.66 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.66 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 98.66 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 98.66 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 98.66 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 98.65 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 98.65 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 98.65 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 98.64 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 98.64 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 98.64 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 98.64 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 98.64 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 98.63 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 98.63 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 98.63 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 98.63 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 98.62 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 98.62 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 98.61 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 98.61 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 98.61 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 98.61 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 98.61 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 98.61 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.6 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 98.6 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.59 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 98.59 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.58 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 98.58 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 98.56 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 98.56 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 98.56 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 98.54 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 98.53 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 98.53 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 98.53 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 98.53 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 98.52 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 98.52 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 98.52 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 98.52 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 98.52 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 98.51 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 98.51 |
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=254.80 Aligned_cols=250 Identities=18% Similarity=0.261 Sum_probs=201.4
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.+.+.+.++++ ++|+|||+|+......+..++...++.|+.++.+++++|++.+++||||+||.++||
T Consensus 79 ~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg 156 (351)
T 3ruf_A 79 SRFCFIEGDIRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYG 156 (351)
T ss_dssp TTEEEEECCTTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred CceEEEEccCCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcC
Confidence 578999999999999999998 899999999987666677888999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcce
Q psy16545 332 EPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPY 410 (600)
Q Consensus 332 ~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~ 410 (600)
.....+++|+.+..|. +.|+.+| ..+|.+++.+.+.++++++++||++ +|++.....
T Consensus 157 ~~~~~~~~E~~~~~p~-~~Y~~sK---~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~------------------ 214 (351)
T 3ruf_A 157 DHPALPKVEENIGNPL-SPYAVTK---YVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNG------------------ 214 (351)
T ss_dssp TCCCSSBCTTCCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCS------------------
T ss_pred CCCCCCCccCCCCCCC-ChhHHHH---HHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCc------------------
Confidence 9888899999998776 8999999 8899999999999999999999987 555432110
Q ss_pred EEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhh
Q psy16545 411 IFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF 490 (600)
Q Consensus 411 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f 490 (600)
. ....+..++..+. .+.++.+. +++.+. ++|
T Consensus 215 ------~-------------------------------~~~~~~~~~~~~~--~~~~~~~~------g~g~~~----~~~ 245 (351)
T 3ruf_A 215 ------A-------------------------------YAAVIPKWTAAML--KGDDVYIN------GDGETS----RDF 245 (351)
T ss_dssp ------T-------------------------------TCCHHHHHHHHHH--HTCCCEEE------SSSCCE----ECC
T ss_pred ------c-------------------------------hhhHHHHHHHHHH--cCCCcEEe------CCCCeE----Eee
Confidence 0 0000122222222 25555542 444444 889
Q ss_pred hhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCC--CCceeEeEcCCCCCccHHHHHHHHhhhcCC-----ccccccc
Q psy16545 491 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK--PVPYIFYNLGTGQGTSVLQLLRTFERVTGK-----PVPYIVE 563 (600)
Q Consensus 491 i~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~--~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~-----~~~~~~~ 563 (600)
+| ++|+++++..++.. ...+++||+++++.+|+.|+++.+++.+|. +.++...
T Consensus 246 i~--------------------v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 305 (351)
T 3ruf_A 246 CY--------------------IDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYR 305 (351)
T ss_dssp EE--------------------HHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEE
T ss_pred EE--------------------HHHHHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCccccccccccccc
Confidence 88 99999999988876 345899999999999999999999999997 3444445
Q ss_pred CCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 564 ARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 564 ~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+.+..+.....+|++|++++|||+|+++++.
T Consensus 306 ~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~ 336 (351)
T 3ruf_A 306 EFRSGDVRHSQADVTKAIDLLKYRPNIKIRE 336 (351)
T ss_dssp CCCTTCCSBCCBCCHHHHHHHCCCCCCCHHH
T ss_pred CCCCCccceeeeCHHHHHHHhCCCCCCCHHH
Confidence 5566677788999999999999999998764
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=253.84 Aligned_cols=248 Identities=21% Similarity=0.295 Sum_probs=195.4
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.+.+.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++.+++||||+||.+|||
T Consensus 75 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~ 154 (346)
T 4egb_A 75 PNYYFVKGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYG 154 (346)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGC
T ss_pred CCeEEEEcCCCCHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhC
Confidence 57899999999999999999865699999999987766667788899999999999999999999999999999999999
Q ss_pred CC-CCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcc
Q psy16545 332 EP-QFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVP 409 (600)
Q Consensus 332 ~~-~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~ 409 (600)
.. ...+++|+++..|. ++|+.+| ..+|.+++.+.+.++++++++||+. +|++.....
T Consensus 155 ~~~~~~~~~E~~~~~p~-~~Y~~sK---~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~----------------- 213 (346)
T 4egb_A 155 SLGKTGRFTEETPLAPN-SPYSSSK---ASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEK----------------- 213 (346)
T ss_dssp CCCSSCCBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTS-----------------
T ss_pred CCCcCCCcCCCCCCCCC-ChhHHHH---HHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccc-----------------
Confidence 76 45689999998875 8999999 8899999999998999999999987 554432110
Q ss_pred eEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhh
Q psy16545 410 YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRT 489 (600)
Q Consensus 410 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 489 (600)
.+..++..+ ..+.++++. +++.+. ++
T Consensus 214 ------------------------------------------~~~~~~~~~--~~~~~~~~~------~~~~~~----~~ 239 (346)
T 4egb_A 214 ------------------------------------------LIPLMVTNA--LEGKKLPLY------GDGLNV----RD 239 (346)
T ss_dssp ------------------------------------------HHHHHHHHH--HTTCCCEEE------TTSCCE----EC
T ss_pred ------------------------------------------hHHHHHHHH--HcCCCceee------CCCCeE----Ee
Confidence 011122222 225555542 344444 88
Q ss_pred hhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccc-ccccCCCCC
Q psy16545 490 FERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP-YIVEARREG 568 (600)
Q Consensus 490 fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~-~~~~~~~~~ 568 (600)
|+| ++|+++++..++..+..+++||+++++.+|+.|+++.+.+.+|.+.+ +.+.+.++.
T Consensus 240 ~i~--------------------v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~ 299 (346)
T 4egb_A 240 WLH--------------------VTDHCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLG 299 (346)
T ss_dssp EEE--------------------HHHHHHHHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--C
T ss_pred eEE--------------------HHHHHHHHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCC
Confidence 988 88999999988876667889999999999999999999999998765 555566666
Q ss_pred CccccccChHHHHHHcCceeeEEEEe
Q psy16545 569 DIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 569 ~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
......+|++|++++|||+|+++++.
T Consensus 300 ~~~~~~~d~~k~~~~lG~~p~~~~~e 325 (346)
T 4egb_A 300 HDRRYAINAEKMKNEFDWEPKYTFEQ 325 (346)
T ss_dssp CCSCCCBCCHHHHHHHCCCCCCCHHH
T ss_pred CcceeeccHHHHHHHcCCCCCCCHHH
Confidence 77778899999999999999998865
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-28 Score=250.07 Aligned_cols=272 Identities=35% Similarity=0.565 Sum_probs=210.0
Q ss_pred HHHHhhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Q psy16545 244 RAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVF 323 (600)
Q Consensus 244 ~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~ 323 (600)
..+....+.+++++.+|+.+++.+.++++..++|+|||+|+.........++...++.|+.++.+++++|++.++++|||
T Consensus 47 ~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~ 126 (341)
T 3enk_A 47 ARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVF 126 (341)
T ss_dssp HHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 34444456788999999999999999998778999999999876666677888999999999999999999999999999
Q ss_pred ecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhC-CCCeeEeecc-cCCCCcchHHHHHHHHHH
Q psy16545 324 SSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTG-NKPVPYIFYN-LGTGQGTSVLQLLRTFER 401 (600)
Q Consensus 324 ~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~-~~~~~~r~~~-~g~~~~~~~~~~~~~~~~ 401 (600)
+||.++||.....+++|+.+..|. ++|+.+| ..+|.+++.++..++ ++++++||++ +|++....
T Consensus 127 ~SS~~~~g~~~~~~~~e~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~---------- 192 (341)
T 3enk_A 127 SSSATVYGVPERSPIDETFPLSAT-NPYGQTK---LMAEQILRDVEAADPSWRVATLRYFNPVGAHESGL---------- 192 (341)
T ss_dssp EEEGGGBCSCSSSSBCTTSCCBCS-SHHHHHH---HHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSS----------
T ss_pred EecceEecCCCCCCCCCCCCCCCC-ChhHHHH---HHHHHHHHHHhhcCCCceEEEEeeccccCCccccc----------
Confidence 999999998888899999988775 8999999 889999999988876 9999999988 66543211
Q ss_pred HhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeecc--CCCCC
Q psy16545 402 VTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYN--LGTGQ 479 (600)
Q Consensus 402 ~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~ 479 (600)
+|+.... ....+..++. ....+...++.+++ +..++
T Consensus 193 -------------~g~~~~~---------------------------~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~ 230 (341)
T 3enk_A 193 -------------IGEDPAG---------------------------IPNNLMPYVA--QVAVGKLEKLRVFGSDYPTPD 230 (341)
T ss_dssp -------------CCCCCSS---------------------------SCSSHHHHHH--HHHHTSSSCEEEECSCSSSTT
T ss_pred -------------cCCCccc---------------------------CccchHHHHH--HHHhcCCCceEEeCCccCCCC
Confidence 1111000 0000111111 11223322332211 01124
Q ss_pred cccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCC---CCceeEeEcCCCCCccHHHHHHHHhhhcCC
Q psy16545 480 GTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK---PVPYIFYNLGTGQGTSVLQLLRTFERVTGK 556 (600)
Q Consensus 480 ~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~---~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~ 556 (600)
+.+. ++|+| ++|+++++..++.. ...+++||+++++.+|+.|+++.+.+.+|.
T Consensus 231 g~~~----~~~i~--------------------v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~ 286 (341)
T 3enk_A 231 GTGV----RDYIH--------------------VVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGR 286 (341)
T ss_dssp SSCE----ECEEE--------------------HHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCS
T ss_pred CCee----EeeEE--------------------HHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCC
Confidence 4444 88988 88888888877764 245899999999999999999999999999
Q ss_pred cccccccCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 557 PVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
+.++...+.++.+.....+|++|++++|||+|+++++.+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 325 (341)
T 3enk_A 287 AVPYELVARRPGDVAECYANPAAAAETIGWKAERDLERM 325 (341)
T ss_dssp CCCEEEECCCTTCCSEECBCCHHHHHHHCCCCCCCHHHH
T ss_pred CcceeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHH
Confidence 888888888888888899999999999999999988653
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.8e-28 Score=246.11 Aligned_cols=240 Identities=17% Similarity=0.245 Sum_probs=197.8
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 332 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~ 332 (600)
+++++.+|+. .+.+.++++ ++|+|||+|+..... ++...++.|+.++.+++++|++.+++||||+||.++||.
T Consensus 43 ~~~~~~~Dl~-~~~~~~~~~--~~d~Vih~a~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~ 115 (311)
T 3m2p_A 43 DYEYRVSDYT-LEDLINQLN--DVDAVVHLAATRGSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSD 115 (311)
T ss_dssp CCEEEECCCC-HHHHHHHTT--TCSEEEECCCCCCSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCC
T ss_pred ceEEEEcccc-HHHHHHhhc--CCCEEEEccccCCCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCC
Confidence 6789999999 999999998 899999999986543 677789999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceE
Q psy16545 333 PQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYI 411 (600)
Q Consensus 333 ~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 411 (600)
....+++|+++..|. ++|+.+| ..+|.+++.+....+++++++||+. +|++....
T Consensus 116 ~~~~~~~E~~~~~p~-~~Y~~sK---~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-------------------- 171 (311)
T 3m2p_A 116 ETSLPWNEKELPLPD-LMYGVSK---LACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN-------------------- 171 (311)
T ss_dssp GGGCSBCTTSCCCCS-SHHHHHH---HHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C--------------------
T ss_pred CCCCCCCCCCCCCCC-chhHHHH---HHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC--------------------
Confidence 888899999998885 8999999 8899999999998999999999987 55443311
Q ss_pred EeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhh
Q psy16545 412 FYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFE 491 (600)
Q Consensus 412 ~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi 491 (600)
..+..++..+ ..+.++++ + +++.+. ++|+
T Consensus 172 ---------------------------------------~~~~~~~~~~--~~~~~~~~----~--g~~~~~----~~~v 200 (311)
T 3m2p_A 172 ---------------------------------------YMINRFFRQA--FHGEQLTL----H--ANSVAK----REFL 200 (311)
T ss_dssp ---------------------------------------CHHHHHHHHH--HTCCCEEE----S--SBCCCC----EEEE
T ss_pred ---------------------------------------CHHHHHHHHH--HcCCCeEE----e--cCCCeE----EceE
Confidence 0011122222 12445443 2 333333 8888
Q ss_pred hhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCC-CCCCc
Q psy16545 492 RVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEAR-REGDI 570 (600)
Q Consensus 492 ~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~-~~~~~ 570 (600)
| ++|+++++..++.++..+++||+++++.+|+.|+++.+++.+|.+.++...+. +..+.
T Consensus 201 ~--------------------v~Dva~a~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~ 260 (311)
T 3m2p_A 201 Y--------------------AKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGI 260 (311)
T ss_dssp E--------------------HHHHHHHHHHHTTCTTCCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSSBCCSC
T ss_pred E--------------------HHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCCCCCCc
Confidence 8 99999999999987767899999999999999999999999999877777766 66777
Q ss_pred cccccChHHHHHHcCceeeEEEEe
Q psy16545 571 VSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 571 ~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
....+|++|++++|||+|+++++.
T Consensus 261 ~~~~~d~~k~~~~lG~~p~~~~~~ 284 (311)
T 3m2p_A 261 HSSYMDSSKAKELLDFSTDYNFAT 284 (311)
T ss_dssp CCBCBCCHHHHHHSCCCCSCCHHH
T ss_pred CceecCHHHHHHHhCCCcccCHHH
Confidence 888999999999999999998764
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-28 Score=248.49 Aligned_cols=253 Identities=19% Similarity=0.199 Sum_probs=199.5
Q ss_pred eeEEEeecCChhhHHHHhhcCCccEEEEcccccC-ccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccC
Q psy16545 254 VDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKA-VGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 332 (600)
Q Consensus 254 v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~-~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~ 332 (600)
++++.+|+.+++.+.++++..++|+|||+|+... ...+..++...++.|+.++.+++++|++.+++||||+||.++||.
T Consensus 40 ~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~ 119 (319)
T 4b8w_A 40 VSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPD 119 (319)
T ss_dssp CCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCS
T ss_pred cCceecccCCHHHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCC
Confidence 3445789999999999998767999999999854 234567888999999999999999999999999999999999999
Q ss_pred CCCCCCCCCC----CCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCC
Q psy16545 333 PQFLPITEDH----PTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKP 407 (600)
Q Consensus 333 ~~~~~~~E~~----~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~ 407 (600)
....+++|++ +..|...+|+.+| ..+|.+++.+.+.++++++++||++ +|++.....
T Consensus 120 ~~~~~~~E~~~~~~~~~p~~~~Y~~sK---~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~--------------- 181 (319)
T 4b8w_A 120 KTTYPIDETMIHNGPPHNSNFGYSYAK---RMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNI--------------- 181 (319)
T ss_dssp SCCSSBCGGGGGBSCCCSSSHHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCT---------------
T ss_pred CCCCCccccccccCCCCCCcchHHHHH---HHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCC---------------
Confidence 8888999997 5555433699999 8899999999999999999999987 555432100
Q ss_pred cceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHH--HHhCCCCceeeccCCCCCcccchh
Q psy16545 408 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFE--RVTGKPVPYIFYNLGTGQGTSVLQ 485 (600)
Q Consensus 408 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~ 485 (600)
.....+..++..+. ...+.++++. +++.+.
T Consensus 182 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~-- 213 (319)
T 4b8w_A 182 ----------------------------------------EDGHVLPGLIHKVHLAKSSGSALTVW------GTGNPR-- 213 (319)
T ss_dssp ----------------------------------------TTSCHHHHHHHHHHHHHHHTCCEEEE------SCSCCE--
T ss_pred ----------------------------------------ccccccHHHHHHHHHHhccCCceEEe------CCCCee--
Confidence 00000122222211 1236665552 444444
Q ss_pred hhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC--CceeEeEcCCCCCccHHHHHHHHhhhcCCccccccc
Q psy16545 486 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP--VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVE 563 (600)
Q Consensus 486 ~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~--~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~ 563 (600)
++|+| ++|+++++..++... ..+++||+++++.+|+.|+++.+.+.+|.+.++.+.
T Consensus 214 --~~~i~--------------------v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~ 271 (319)
T 4b8w_A 214 --RQFIY--------------------SLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFD 271 (319)
T ss_dssp --ECEEE--------------------HHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEE
T ss_pred --EEEEe--------------------HHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeC
Confidence 88988 889999998888653 347899999999999999999999999998888887
Q ss_pred CCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 564 ARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 564 ~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+.++.+.....+|++|++++|||+|+++++.
T Consensus 272 ~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~ 302 (319)
T 4b8w_A 272 TTKSDGQFKKTASNSKLRTYLPDFRFTPFKQ 302 (319)
T ss_dssp TTSCCCCSCCCBCCHHHHHHCTTCCCCCHHH
T ss_pred CCCCcCcccccCCHHHHHHhcCCCCCCCHHH
Confidence 7777777778899999999999999998864
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-27 Score=242.83 Aligned_cols=245 Identities=23% Similarity=0.390 Sum_probs=192.0
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
...++++.+|+.+ +.+.++++ ++|+|||+|+......+..++...++.|+.++.+++++|++.+++||||+||.++|
T Consensus 42 ~~~~~~~~~Dl~~-~~~~~~~~--~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vy 118 (313)
T 3ehe_A 42 NEAARLVKADLAA-DDIKDYLK--GAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVY 118 (313)
T ss_dssp CTTEEEECCCTTT-SCCHHHHT--TCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGG
T ss_pred CCCcEEEECcCCh-HHHHHHhc--CCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHh
Confidence 3468899999999 88888888 89999999997766667788999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcc
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVP 409 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~ 409 (600)
|.....+++|+.+..|. ++|+.+| ..+|.+++.++..++++++++||++ +|+++...+
T Consensus 119 g~~~~~~~~E~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~----------------- 177 (313)
T 3ehe_A 119 GEAKVIPTPEDYPTHPI-SLYGASK---LACEALIESYCHTFDMQAWIYRFANVIGRRSTHGV----------------- 177 (313)
T ss_dssp CSCSSSSBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHTTCEEEEEECSCEESTTCCCSH-----------------
T ss_pred CcCCCCCCCCCCCCCCC-CHHHHHH---HHHHHHHHHHHHhcCCCEEEEeeccccCcCCCcCh-----------------
Confidence 99888899999988775 8999999 8899999999999999999999987 555433211
Q ss_pred eEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhC-CCCceeeccCCCCCcccchhhhh
Q psy16545 410 YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTG-KPVPYIFYNLGTGQGTSVLQLLR 488 (600)
Q Consensus 410 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~ 488 (600)
+..++..+.+ + .++++ + +++.+. +
T Consensus 178 -------------------------------------------~~~~~~~~~~--~~~~~~~----~--~~g~~~----~ 202 (313)
T 3ehe_A 178 -------------------------------------------IYDFIMKLKR--NPEELEI----L--GNGEQN----K 202 (313)
T ss_dssp -------------------------------------------HHHHHHHHHH--CTTEEEE----S--TTSCCE----E
T ss_pred -------------------------------------------HHHHHHHHHc--CCCceEE----e--CCCCeE----E
Confidence 1111111111 2 22222 1 444444 8
Q ss_pred hhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCC---
Q psy16545 489 TFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEAR--- 565 (600)
Q Consensus 489 ~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~--- 565 (600)
+|+| ++|+++++..++.....+++||+++++++|+.|+++.+++.+|.+.++.+.+.
T Consensus 203 ~~i~--------------------v~Dva~a~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 262 (313)
T 3ehe_A 203 SYIY--------------------ISDCVDAMLFGLRGDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRG 262 (313)
T ss_dssp CCEE--------------------HHHHHHHHHHHTTCCSSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC-----
T ss_pred eEEE--------------------HHHHHHHHHHHhccCCCCceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCccC
Confidence 8988 99999999999986667899999999999999999999999998766655442
Q ss_pred CCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 566 REGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 566 ~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
...+.....+|++|+++ |||+|+++++.+
T Consensus 263 ~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~ 291 (313)
T 3ehe_A 263 WKGDVPVMLLSIEKLKR-LGWKPRYNSEEA 291 (313)
T ss_dssp -------CCBCCHHHHH-HTCCCSCCHHHH
T ss_pred CccccceeccCHHHHHH-cCCCCCCCHHHH
Confidence 23455667899999965 999999988653
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.6e-27 Score=240.67 Aligned_cols=269 Identities=33% Similarity=0.541 Sum_probs=198.3
Q ss_pred HhhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecC
Q psy16545 247 EQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSS 326 (600)
Q Consensus 247 ~~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS 326 (600)
..+.+.+++++.+|+.+++.+.++++..++|+|||+|+.........++...++.|+.++.+++++|++.+++||||+||
T Consensus 45 ~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 124 (338)
T 1udb_A 45 ERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSS 124 (338)
T ss_dssp HHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred HhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 33335568899999999999999887657999999999765444556778899999999999999999989999999999
Q ss_pred cccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh-CCCCeeEeecc-cCCCCcchHHHHHHHHHHHhC
Q psy16545 327 CTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT-GNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTG 404 (600)
Q Consensus 327 ~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~-~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g 404 (600)
.++||.....+++|+.+..|..++|+.|| ..+|.+++.++..+ +++++++|+++ +|+.....
T Consensus 125 ~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK---~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~------------- 188 (338)
T 1udb_A 125 ATVYGDNPKIPYVESFPTGTPQSPYGKSK---LMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGD------------- 188 (338)
T ss_dssp GGGGCSCCSSSBCTTSCCCCCSSHHHHHH---HHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSS-------------
T ss_pred HHHhCCCCCCCcCcccCCCCCCChHHHHH---HHHHHHHHHHHHhcCCCceEEEeeceecCCCcccc-------------
Confidence 99999877778899988766458999999 78999999998876 89999999987 55432110
Q ss_pred CCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeecc--CCCCCccc
Q psy16545 405 NKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYN--LGTGQGTS 482 (600)
Q Consensus 405 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~ 482 (600)
||+..... ....+..+.. ...+...++.+++ +..++|.+
T Consensus 189 ----------~g~~~~~~--------------------------~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~g~~ 229 (338)
T 1udb_A 189 ----------MGEDPQGI--------------------------PNNLMPYIAQ---VAVGRRDSLAIFGNDYPTEDGTG 229 (338)
T ss_dssp ----------SCCCCCSS--------------------------CCSHHHHHHH---HHHTSSSCEEEECSCSSSSSSSC
T ss_pred ----------cccccccc--------------------------hhhHHHHHHH---HHHhcCCCcEEecCcccCCCCce
Confidence 22211000 0000111111 1112222222211 11124444
Q ss_pred chhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC---CceeEeEcCCCCCccHHHHHHHHhhhcCCccc
Q psy16545 483 VLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP---VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP 559 (600)
Q Consensus 483 ~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~---~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~ 559 (600)
. ++|+| ++|+++++..+++.. ..+++||+++++++|+.|+++.+++.+|.+.+
T Consensus 230 ~----~~~i~--------------------v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 285 (338)
T 1udb_A 230 V----RDYIH--------------------VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVN 285 (338)
T ss_dssp E----ECEEE--------------------HHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCC
T ss_pred e----eeeEE--------------------HHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCc
Confidence 4 88988 888888887776531 22489999999999999999999999998877
Q ss_pred ccccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 560 YIVEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 560 ~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+...+.+.++.....+|++|++++|||+|+++|+.
T Consensus 286 ~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 320 (338)
T 1udb_A 286 YHFAPRREGDLPAYWADASKADRELNWRVTRTLDE 320 (338)
T ss_dssp EEEECCCTTCCSBCCBCCHHHHHHHCCCCCCCHHH
T ss_pred ceeCCCCCCchhhhhcCHHHHHHHcCCCcCCCHHH
Confidence 77667666677778899999999999999998764
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-27 Score=241.65 Aligned_cols=244 Identities=25% Similarity=0.388 Sum_probs=192.0
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
..+++++.+|+.+.+ +.+.++ + |+|||+|+......+..++...++.|+.++.+++++|++.+++||||+||.++|
T Consensus 42 ~~~~~~~~~Dl~d~~-~~~~~~--~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vy 117 (312)
T 3ko8_A 42 NPSAELHVRDLKDYS-WGAGIK--G-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVY 117 (312)
T ss_dssp CTTSEEECCCTTSTT-TTTTCC--C-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGG
T ss_pred CCCceEEECccccHH-HHhhcC--C-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHh
Confidence 456889999999998 777776 4 999999998766677788999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcc
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVP 409 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~ 409 (600)
|.....+++|+.+..|. ++|+.+| ..+|.+++.+...++++++++||++ +|++.....
T Consensus 118 g~~~~~~~~e~~~~~p~-~~Y~~sK---~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~----------------- 176 (312)
T 3ko8_A 118 GDADVIPTPEEEPYKPI-SVYGAAK---AAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGV----------------- 176 (312)
T ss_dssp CSCSSSSBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECEEECTTCCSSH-----------------
T ss_pred CCCCCCCCCCCCCCCCC-ChHHHHH---HHHHHHHHHHHHHhCCCEEEEeeccccCcCCCCCh-----------------
Confidence 99888899999988775 8999999 8899999999999999999999987 555432211
Q ss_pred eEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhC-CCCceeeccCCCCCcccchhhhh
Q psy16545 410 YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTG-KPVPYIFYNLGTGQGTSVLQLLR 488 (600)
Q Consensus 410 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~ 488 (600)
+..++..+.. + .++++ + +++.+. +
T Consensus 177 -------------------------------------------~~~~~~~~~~--~~~~~~~----~--~~g~~~----~ 201 (312)
T 3ko8_A 177 -------------------------------------------IYDFIMKLRR--NPNVLEV----L--GDGTQR----K 201 (312)
T ss_dssp -------------------------------------------HHHHHHHHHH--CTTEEEE----C------CE----E
T ss_pred -------------------------------------------HHHHHHHHHh--CCCCeEE----c--CCCCeE----E
Confidence 1111111111 2 22222 1 344444 8
Q ss_pred hhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCC----CCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccC
Q psy16545 489 TFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK----PVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEA 564 (600)
Q Consensus 489 ~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~----~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 564 (600)
+|+| ++|+++++..++.. ...+++||+++++.+|+.|+++.+.+.+|.+.++...+
T Consensus 202 ~~i~--------------------v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~ 261 (312)
T 3ko8_A 202 SYLY--------------------VRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVP 261 (312)
T ss_dssp CEEE--------------------HHHHHHHHHHHHHHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC-
T ss_pred eeEE--------------------HHHHHHHHHHHHHhccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecC
Confidence 8888 88889998888765 45689999999999999999999999999876666544
Q ss_pred C------CCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 565 R------REGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 565 ~------~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
. .+.+.....+|++|+++.|||+|+++++.
T Consensus 262 ~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~ 297 (312)
T 3ko8_A 262 STPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAE 297 (312)
T ss_dssp ---------CCCSEECBCCHHHHHHHCCCCSSCHHH
T ss_pred ccccccCCCCCccccccCHHHHHHHhCCCCCCCHHH
Confidence 3 24456678899999999999999998765
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=239.95 Aligned_cols=250 Identities=21% Similarity=0.293 Sum_probs=196.2
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.+.+.+.++++ ++|+|||+|+......+..++...++.|+.++.+++++|++.+++||||+||.++||
T Consensus 81 ~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~ 158 (352)
T 1sb8_A 81 SNFKFIQGDIRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYG 158 (352)
T ss_dssp TTEEEEECCTTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred CceEEEECCCCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcC
Confidence 578999999999999999998 899999999976554455688889999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcce
Q psy16545 332 EPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPY 410 (600)
Q Consensus 332 ~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~ 410 (600)
.....+++|+++..|. ++|+.+| ..+|.+++.+....+++++++||+. +|++.....
T Consensus 159 ~~~~~~~~E~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~------------------ 216 (352)
T 1sb8_A 159 DHPGLPKVEDTIGKPL-SPYAVTK---YVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNG------------------ 216 (352)
T ss_dssp TCCCSSBCTTCCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCS------------------
T ss_pred CCCCCCCCCCCCCCCC-ChhHHHH---HHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCc------------------
Confidence 8777789999987775 8999999 7899999999988899999999987 554322110
Q ss_pred EEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhh
Q psy16545 411 IFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF 490 (600)
Q Consensus 411 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f 490 (600)
.. ...+..++..+. .+.++.+. +++.+. ++|
T Consensus 217 ------~~-------------------------------~~~~~~~~~~~~--~~~~~~~~------g~g~~~----~~~ 247 (352)
T 1sb8_A 217 ------AY-------------------------------AAVIPKWTSSMI--QGDDVYIN------GDGETS----RDF 247 (352)
T ss_dssp ------TT-------------------------------CCHHHHHHHHHH--HTCCCEEE------SSSCCE----ECC
T ss_pred ------ch-------------------------------hhHHHHHHHHHH--CCCCcEEe------CCCCce----Eee
Confidence 00 000111222221 25554431 344433 788
Q ss_pred hhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCC--CCceeEeEcCCCCCccHHHHHHHHhhhc---CCccc--cccc
Q psy16545 491 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK--PVPYIFYNLGTGQGTSVLQLLRTFERVT---GKPVP--YIVE 563 (600)
Q Consensus 491 i~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~--~~~~~~~nl~~~~~~s~~e~~~~~~~~~---g~~~~--~~~~ 563 (600)
+| ++|+++++..++.. ...+++||+++++.+|+.|+++.+++.+ |.+.+ +.+.
T Consensus 248 i~--------------------v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~ 307 (352)
T 1sb8_A 248 CY--------------------IENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYR 307 (352)
T ss_dssp EE--------------------HHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEE
T ss_pred EE--------------------HHHHHHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceec
Confidence 88 88999988887765 2458999999999999999999999999 87655 3344
Q ss_pred CCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 564 ARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 564 ~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+.++.+.....+|++|++++|||+|+++++.
T Consensus 308 ~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e 338 (352)
T 1sb8_A 308 DFREGDVRHSLADISKAAKLLGYAPKYDVSA 338 (352)
T ss_dssp CCCTTCCSBCCBCCHHHHHHTCCCCCCCHHH
T ss_pred CCCccchhhccCCHHHHHHHhCCCCCCCHHH
Confidence 5555566778899999999999999988764
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=240.12 Aligned_cols=270 Identities=39% Similarity=0.639 Sum_probs=200.2
Q ss_pred HHhhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Q psy16545 246 IEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSS 325 (600)
Q Consensus 246 ~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~S 325 (600)
+....+.+++++.+|+.+.+.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++.+++||||+|
T Consensus 52 l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~S 131 (348)
T 1ek6_A 52 VQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSS 131 (348)
T ss_dssp HHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHhccCCceEEEECCCCCHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEEC
Confidence 33334567899999999999999988766799999999976554455678889999999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH-hCCCCeeEeecc-cCCCCcchHHHHHHHHHHHh
Q psy16545 326 SCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV-TGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVT 403 (600)
Q Consensus 326 S~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~-~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~ 403 (600)
|.++||.....+++|+++..|..++|+.+| ..+|.+++.+... .+++++++||++ +|++....
T Consensus 132 S~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK---~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~------------ 196 (348)
T 1ek6_A 132 SATVYGNPQYLPLDEAHPTGGCTNPYGKSK---FFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGC------------ 196 (348)
T ss_dssp EGGGGCSCSSSSBCTTSCCCCCSSHHHHHH---HHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSS------------
T ss_pred cHHHhCCCCCCCcCCCCCCCCCCCchHHHH---HHHHHHHHHHHhcCCCcceEEEeeccccCCCcccc------------
Confidence 999999877788999998777348999999 8899999999877 239999999987 55532110
Q ss_pred CCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeecc--CCCCCcc
Q psy16545 404 GNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYN--LGTGQGT 481 (600)
Q Consensus 404 g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~ 481 (600)
||+.... .....+..+.. ...+...++.+++ +..+++.
T Consensus 197 -----------~g~~~~~--------------------------~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~g~ 236 (348)
T 1ek6_A 197 -----------IGEDPQG--------------------------IPNNLMPYVSQ---VAIGRREALNVFGNDYDTEDGT 236 (348)
T ss_dssp -----------CCCCCSS--------------------------SCCSHHHHHHH---HHHTSSSCEEEECSCSSSSSSS
T ss_pred -----------cCcCccc--------------------------chhhHHHHHHH---HHHhcCCCeEEeCCcccCCCCc
Confidence 1221100 00000111111 1122222222221 1112344
Q ss_pred cchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC--Cc-eeEeEcCCCCCccHHHHHHHHhhhcCCcc
Q psy16545 482 SVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP--VP-YIFYNLGTGQGTSVLQLLRTFERVTGKPV 558 (600)
Q Consensus 482 ~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~--~~-~~~~nl~~~~~~s~~e~~~~~~~~~g~~~ 558 (600)
+. ++|+| ++|+++++..++... .. +++||+++++.+|+.|+++.+.+.+|.+.
T Consensus 237 ~~----~~~i~--------------------v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 292 (348)
T 1ek6_A 237 GV----RDYIH--------------------VVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI 292 (348)
T ss_dssp CE----ECEEE--------------------HHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCC
T ss_pred eE----EeeEE--------------------HHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCC
Confidence 44 88988 888888888777542 23 48999999999999999999999999887
Q ss_pred cccccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 559 PYIVEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 559 ~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
++...+.+.++.....+|++|++++|||+|+++++.
T Consensus 293 ~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 328 (348)
T 1ek6_A 293 PYKVVARREGDVAACYANPSLAQEELGWTAALGLDR 328 (348)
T ss_dssp CEEEECCCTTCCSEECBCCHHHHHTTCCCCCCCHHH
T ss_pred ceeeCCCCCccchhhccCHHHHHHhcCCCCCCCHHH
Confidence 776666666667778899999999999999998764
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.6e-27 Score=239.77 Aligned_cols=261 Identities=30% Similarity=0.493 Sum_probs=198.0
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 332 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~ 332 (600)
+++++.+|+.+.+.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++.+++||||+||.++||.
T Consensus 45 ~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~ 124 (330)
T 2c20_A 45 GAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGE 124 (330)
T ss_dssp TSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCS
T ss_pred CcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCC
Confidence 67899999999999999987667999999999865544556788899999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceE
Q psy16545 333 PQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYI 411 (600)
Q Consensus 333 ~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 411 (600)
....+++|+++..|. ++|+.+| ..+|.+++.+...++++++++||++ +|++....
T Consensus 125 ~~~~~~~E~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~-------------------- 180 (330)
T 2c20_A 125 VDVDLITEETMTNPT-NTYGETK---LAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGI-------------------- 180 (330)
T ss_dssp CSSSSBCTTSCCCCS-SHHHHHH---HHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCS--------------------
T ss_pred CCCCCCCcCCCCCCC-ChHHHHH---HHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCc--------------------
Confidence 777789999988765 8999999 8899999999988899999999987 65542211
Q ss_pred EeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeecc--CCCCCcccchhhhhh
Q psy16545 412 FYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYN--LGTGQGTSVLQLLRT 489 (600)
Q Consensus 412 ~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~ 489 (600)
||+.... ....+..+. ....+...++.+++ +..+++.+. ++
T Consensus 181 ---~g~~~~~---------------------------~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~g~~~----~~ 223 (330)
T 2c20_A 181 ---IGEDHRP---------------------------ETHLIPLVL---QVALGQREKIMMFGDDYNTPDGTCI----RD 223 (330)
T ss_dssp ---SCCCCSS---------------------------CCSHHHHHH---HHHTTSSSCEEEECSCCSSSSSSCE----EC
T ss_pred ---ccccccc---------------------------ccchHHHHH---HHHhhcCCCeEEeCCccccCCCcee----Ee
Confidence 2221100 000011111 11122222222221 111234444 88
Q ss_pred hhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC---CceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCC
Q psy16545 490 FERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP---VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARR 566 (600)
Q Consensus 490 fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~---~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~ 566 (600)
|+| ++|+++++..++... ..+++||+++++.+|+.|+++.+++.+|.+.++...+.+
T Consensus 224 ~v~--------------------v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 283 (330)
T 2c20_A 224 YIH--------------------VEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRR 283 (330)
T ss_dssp EEE--------------------HHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECCC
T ss_pred eEe--------------------HHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCC
Confidence 888 888888888777542 236899999999999999999999999988777766666
Q ss_pred CCCccccccChHHHHHHcCceeeE-EEEe
Q psy16545 567 EGDIVSMYANTDLAQRELGWSARC-TVKI 594 (600)
Q Consensus 567 ~~~~~~~~~d~~k~~~~lG~~p~~-~l~~ 594 (600)
.++.....+|++|++++|||+|++ +++.
T Consensus 284 ~~~~~~~~~d~~k~~~~lG~~p~~~~l~~ 312 (330)
T 2c20_A 284 AGDPARLVASSQKAKEKLGWDPRYVNVKT 312 (330)
T ss_dssp SSCCSEECBCCHHHHHHHCCCCSCCCHHH
T ss_pred CCcccccccCHHHHHHHhCCCCccCCHHH
Confidence 666777889999999999999998 7764
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-27 Score=240.10 Aligned_cols=252 Identities=25% Similarity=0.329 Sum_probs=194.9
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCc-cccc
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSC-TVYG 331 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~-~vYg 331 (600)
+++++.+|+.+++.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++.+++||||+||. ++||
T Consensus 44 ~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g 123 (311)
T 2p5y_A 44 GVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYG 123 (311)
T ss_dssp TCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHC
T ss_pred CeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcC
Confidence 567889999999999998876678999999997655555678888999999999999999999999999999999 9999
Q ss_pred C-CCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcc
Q psy16545 332 E-PQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVP 409 (600)
Q Consensus 332 ~-~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~ 409 (600)
. ....+++|+.+..|. ++|+.+| ..+|.+++.+.+.++++++++||++ +||+.....
T Consensus 124 ~~~~~~~~~E~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~----------------- 182 (311)
T 2p5y_A 124 EVPEGERAEETWPPRPK-SPYAASK---AAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHG----------------- 182 (311)
T ss_dssp CCCTTCCBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSS-----------------
T ss_pred CCCCCCCcCCCCCCCCC-ChHHHHH---HHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCC-----------------
Confidence 7 555688999887665 8999999 7799999999988899999999987 554432110
Q ss_pred eEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhh
Q psy16545 410 YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRT 489 (600)
Q Consensus 410 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 489 (600)
....+..++..+. .+.++.+.. ....+++.+. ++
T Consensus 183 ---------------------------------------~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~g~~~----~~ 216 (311)
T 2p5y_A 183 ---------------------------------------EAGVVAIFAERVL--KGLPVTLYA-RKTPGDEGCV----RD 216 (311)
T ss_dssp ---------------------------------------TTHHHHHHHHHHH--HTCCEEEEC-SSSTTSCCCE----EC
T ss_pred ---------------------------------------cCcHHHHHHHHHH--cCCCcEEEe-cccCCCCCeE----Ee
Confidence 0000111222221 244433210 0000333333 88
Q ss_pred hhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCCCCC
Q psy16545 490 FERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGD 569 (600)
Q Consensus 490 fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~ 569 (600)
|+| ++|+++++..++..+ +++||+++++.+|++|+++.+.+.+|.+.++...+.+.++
T Consensus 217 ~i~--------------------v~Dva~a~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~ 274 (311)
T 2p5y_A 217 YVY--------------------VGDVAEAHALALFSL--EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGD 274 (311)
T ss_dssp EEE--------------------HHHHHHHHHHHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCCTTC
T ss_pred eEE--------------------HHHHHHHHHHHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCCccc
Confidence 888 888999888877653 7899999999999999999999999988777777766667
Q ss_pred ccccccChHHHHHHcCceeeEEEEe
Q psy16545 570 IVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 570 ~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
.....+|++|+++ |||+|+++++.
T Consensus 275 ~~~~~~d~~k~~~-lg~~p~~~~~~ 298 (311)
T 2p5y_A 275 LERSVLSPLKLMA-HGWRPKVGFQE 298 (311)
T ss_dssp CSBCCBCCHHHHT-TTCCCSSCHHH
T ss_pred hhhccCCHHHHHH-CCCCCCCCHHH
Confidence 7788999999999 99999988864
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=238.81 Aligned_cols=247 Identities=21% Similarity=0.270 Sum_probs=192.7
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
+.+++++.+|+.+++.+.+++. ++|+|||+|+......+..++...++.|+.++.+++++|++.+++||||+||.++|
T Consensus 54 ~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vy 131 (337)
T 1r6d_A 54 DPRLRFVHGDIRDAGLLARELR--GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVY 131 (337)
T ss_dssp CTTEEEEECCTTCHHHHHHHTT--TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGG
T ss_pred CCCeEEEEcCCCCHHHHHHHhc--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHh
Confidence 3578999999999999999886 89999999997654445567788999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcc
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVP 409 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~ 409 (600)
|.....+++|+.+..|. ++|+.+| ..+|.+++.+...++++++++||+. +|++..... +
T Consensus 132 g~~~~~~~~E~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~--~-------------- 191 (337)
T 1r6d_A 132 GSIDSGSWTESSPLEPN-SPYAASK---AGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEK--L-------------- 191 (337)
T ss_dssp CCCSSSCBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTS--H--------------
T ss_pred CCCCCCCCCCCCCCCCC-CchHHHH---HHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCC--h--------------
Confidence 98766788999887765 8999999 7899999999988899999999887 554332100 0
Q ss_pred eEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhh
Q psy16545 410 YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRT 489 (600)
Q Consensus 410 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 489 (600)
+..++..+ ..+.++++ + +++.+. ++
T Consensus 192 -------------------------------------------~~~~~~~~--~~~~~~~~----~--~~~~~~----~~ 216 (337)
T 1r6d_A 192 -------------------------------------------IPLFVTNL--LDGGTLPL----Y--GDGANV----RE 216 (337)
T ss_dssp -------------------------------------------HHHHHHHH--HTTCCEEE----E--TTSCCE----EE
T ss_pred -------------------------------------------HHHHHHHH--hcCCCcEE----e--CCCCee----Ee
Confidence 11111111 12444443 1 333333 78
Q ss_pred hhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccc-ccccCCCCC
Q psy16545 490 FERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP-YIVEARREG 568 (600)
Q Consensus 490 fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~-~~~~~~~~~ 568 (600)
|+| ++|+++++..++..+..+++||+++++.+|+.|+++.+.+.+|.+.+ +.+.+.+++
T Consensus 217 ~i~--------------------v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~ 276 (337)
T 1r6d_A 217 WVH--------------------TDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKG 276 (337)
T ss_dssp EEE--------------------HHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTT
T ss_pred eEe--------------------HHHHHHHHHHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCCCCC
Confidence 888 88899998888765556789999999999999999999999998643 334444444
Q ss_pred CccccccChHHHHHHcCceeeEEEEe
Q psy16545 569 DIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 569 ~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
....+.+|++|++++|||+|+++++.
T Consensus 277 ~~~~~~~d~~k~~~~lG~~p~~~~~e 302 (337)
T 1r6d_A 277 HDLRYSLDGGKIERELGYRPQVSFAD 302 (337)
T ss_dssp CCCBCCBCCHHHHHHHCCCCCSCHHH
T ss_pred CcceeecCHHHHHHHcCCCCCCCHHH
Confidence 44556789999999999999988764
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=236.55 Aligned_cols=249 Identities=18% Similarity=0.327 Sum_probs=194.4
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecCccccc
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTVYG 331 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~r~v~~SS~~vYg 331 (600)
+++++.+|+.+++.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++. +++||||+||.++||
T Consensus 52 ~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g 131 (321)
T 2pk3_A 52 NVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYG 131 (321)
T ss_dssp TEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTB
T ss_pred eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcC
Confidence 5788999999999999998854589999999987655566788899999999999999999876 589999999999999
Q ss_pred CC--CCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCc
Q psy16545 332 EP--QFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPV 408 (600)
Q Consensus 332 ~~--~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~ 408 (600)
.. ...+++|+++..|. ++|+.+| ..+|.+++.+...++++++++||++ +|++..... +
T Consensus 132 ~~~~~~~~~~E~~~~~~~-~~Y~~sK---~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~--~------------- 192 (321)
T 2pk3_A 132 MILPEESPVSEENQLRPM-SPYGVSK---ASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGF--V------------- 192 (321)
T ss_dssp SCCGGGCSBCTTSCCBCC-SHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTS--H-------------
T ss_pred CCCCCCCCCCCCCCCCCC-CccHHHH---HHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCc--h-------------
Confidence 76 66789999987765 8999999 8899999999988899999999987 555432210 0
Q ss_pred ceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHH-hC--CCCceeeccCCCCCcccchh
Q psy16545 409 PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERV-TG--KPVPYIFYNLGTGQGTSVLQ 485 (600)
Q Consensus 409 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~g~~~~~~~ 485 (600)
+..++..+... .| +++.+ + +++.+.
T Consensus 193 --------------------------------------------~~~~~~~~~~~~~g~~~~~~~----~--~~~~~~-- 220 (321)
T 2pk3_A 193 --------------------------------------------TQDFAKQIVDIEMEKQEPIIK----V--GNLEAV-- 220 (321)
T ss_dssp --------------------------------------------HHHHHHHHHHHHTTSSCSEEE----E--SCSSCE--
T ss_pred --------------------------------------------HHHHHHHHHHHhcCCCCCeEE----e--CCCCcE--
Confidence 11111111110 13 23322 1 333333
Q ss_pred hhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccC-
Q psy16545 486 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEA- 564 (600)
Q Consensus 486 ~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~- 564 (600)
++|+| ++|+++++..++..+..+++||+++++.+|+.|+++.+.+.+|.+.++...|
T Consensus 221 --~~~v~--------------------v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~ 278 (321)
T 2pk3_A 221 --RDFTD--------------------VRDIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPL 278 (321)
T ss_dssp --EEEEE--------------------HHHHHHHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGG
T ss_pred --EeeEE--------------------HHHHHHHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeeccc
Confidence 78888 8899999988886555578999999999999999999999999876665555
Q ss_pred -CCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 565 -RREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 565 -~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
.++.+.....+|++|++++|||+|+++++.
T Consensus 279 ~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e 309 (321)
T 2pk3_A 279 QLRPSEVPTLIGSNKRLKDSTGWKPRIPLEK 309 (321)
T ss_dssp GCCSSCCSBCCBCCHHHHHHHCCCCCSCHHH
T ss_pred cCCCcccchhccCHHHHHHHcCCCcCCCHHH
Confidence 344555678899999999999999988764
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-26 Score=236.25 Aligned_cols=250 Identities=17% Similarity=0.182 Sum_probs=193.6
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCC-CEEEEecCcccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV-YQLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~r~v~~SS~~vY 330 (600)
.+++++.+|+.+.+.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++.++ +||||+||.++|
T Consensus 63 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~ 142 (335)
T 1rpn_A 63 GDIQYEDGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMF 142 (335)
T ss_dssp GGEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGG
T ss_pred CceEEEECCCCCHHHHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHh
Confidence 4688999999999999999886568999999998665555678889999999999999999999986 899999999999
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHH-HHHHHHHHHhCCCCc
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVL-QLLRTFERVTGNKPV 408 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~-~~~~~~~~~~g~~~~ 408 (600)
|.....+++|+++..|. ++|+.+| ..+|.+++.+...++++++++||++ +||+....+. ..
T Consensus 143 g~~~~~~~~E~~~~~p~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~------------- 205 (335)
T 1rpn_A 143 GLIQAERQDENTPFYPR-SPYGVAK---LYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRK------------- 205 (335)
T ss_dssp CSCSSSSBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHH-------------
T ss_pred CCCCCCCCCcccCCCCC-ChhHHHH---HHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHH-------------
Confidence 98777789999988775 8999999 7899999999988899999999887 5554332210 00
Q ss_pred ceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhh
Q psy16545 409 PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLR 488 (600)
Q Consensus 409 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 488 (600)
+..++..+ ..+.+..+.+ +++.+. +
T Consensus 206 --------------------------------------------~~~~~~~~--~~g~~~~~~~-----g~g~~~----~ 230 (335)
T 1rpn_A 206 --------------------------------------------VTDAVARI--KLGKQQELRL-----GNVDAK----R 230 (335)
T ss_dssp --------------------------------------------HHHHHHHH--HTTSCSCEEE-----SCTTCE----E
T ss_pred --------------------------------------------HHHHHHHH--HcCCCceEEe-----CCCcce----e
Confidence 00011111 1233332221 344434 8
Q ss_pred hhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccc--ccc--cC
Q psy16545 489 TFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP--YIV--EA 564 (600)
Q Consensus 489 ~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~--~~~--~~ 564 (600)
+|+| ++|+++++..++..+. .++||+++++.+|+.|+++.+.+.+|.+.+ +.. ..
T Consensus 231 ~~i~--------------------v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 289 (335)
T 1rpn_A 231 DWGF--------------------AGDYVEAMWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAF 289 (335)
T ss_dssp ECEE--------------------HHHHHHHHHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGG
T ss_pred ceEE--------------------HHHHHHHHHHHHhcCC-CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccc
Confidence 8888 8999999998887653 489999999999999999999999997532 111 12
Q ss_pred CCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 565 RREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 565 ~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
.++.+.....+|++|++++|||+|+++++.
T Consensus 290 ~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e 319 (335)
T 1rpn_A 290 FRPAEVDVLLGNPAKAQRVLGWKPRTSLDE 319 (335)
T ss_dssp CCSSCCCBCCBCTHHHHHHHCCCCCSCHHH
T ss_pred cCCCcchhhcCCHHHHHHhcCCCcCCCHHH
Confidence 344555667889999999999999988764
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=243.10 Aligned_cols=259 Identities=21% Similarity=0.276 Sum_probs=186.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecCccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTV 329 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~r~v~~SS~~v 329 (600)
..+++++.+|+.+++.+.++++ ++|+|||+|+......+..++...++.|+.++.+++++|++. +++||||+||.++
T Consensus 77 ~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~v 154 (377)
T 2q1s_A 77 HPAVRFSETSITDDALLASLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCS 154 (377)
T ss_dssp CTTEEEECSCTTCHHHHHHCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--
T ss_pred CCceEEEECCCCCHHHHHHHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHH
Confidence 3568999999999999999887 899999999986554455688889999999999999999998 8999999999999
Q ss_pred ccCCCCCCCC--CCC---CC-CCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHH
Q psy16545 330 YGEPQFLPIT--EDH---PT-GNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERV 402 (600)
Q Consensus 330 Yg~~~~~~~~--E~~---~~-~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~ 402 (600)
||.....+++ |+. |. .|. ++|+.+| ..+|.+++.+....+++++++||+. +|++.....
T Consensus 155 yg~~~~~~~~~~E~~~~~~~~~~~-~~Y~~sK---~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~---------- 220 (377)
T 2q1s_A 155 IAEKTFDDAKATEETDIVSLHNND-SPYSMSK---IFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGA---------- 220 (377)
T ss_dssp ------------CCCCCCCSSCCC-SHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTC----------
T ss_pred cCCCCCCCcCcccccccccccCCC-CchHHHH---HHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccc----------
Confidence 9987766788 887 65 554 8999999 7899999999988899999999987 555431000
Q ss_pred hCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCccc
Q psy16545 403 TGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTS 482 (600)
Q Consensus 403 ~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 482 (600)
|. +.. ... +. ....+..++..+ ..+.++++ + +++.+
T Consensus 221 -g~---------~~~--~~~-----------------------~~-~~~~~~~~~~~~--~~g~~~~~----~--g~g~~ 256 (377)
T 2q1s_A 221 -GR---------WRG--TPA-----------------------TV-WRNVTPTFIYKA--LKGMPLPL----E--NGGVA 256 (377)
T ss_dssp -SS---------CCS--SGG-----------------------GT-SCSHHHHHHHHH--HTTCCCCC----S--GGGCC
T ss_pred -cc---------ccc--Ccc-----------------------cc-cccHHHHHHHHH--HcCCCeEE----e--CCCCe
Confidence 00 000 000 00 000011222222 12455443 1 34443
Q ss_pred chhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHH-hhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccccc
Q psy16545 483 VLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRT-FERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYI 561 (600)
Q Consensus 483 ~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a-~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~ 561 (600)
. ++|+| ++|++++ +..++..+..+ +||+++++.+|++|+++.+++.+|.+.++.
T Consensus 257 ~----~~~i~--------------------v~Dva~a~i~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~ 311 (377)
T 2q1s_A 257 T----RDFIF--------------------VEDVANGLIACAADGTPGG-VYNIASGKETSIADLATKINEITGNNTELD 311 (377)
T ss_dssp E----ECCEE--------------------HHHHHHHHHHHHHHCCTTE-EEECCCCCCEEHHHHHHHHHHHHTCCSCCC
T ss_pred E----EeeEE--------------------HHHHHHHHHHHHHhcCCCC-eEEecCCCceeHHHHHHHHHHHhCCCCCce
Confidence 4 88888 8899999 88887665456 999999999999999999999999887777
Q ss_pred ccCCCCCCcc-ccccChHHHHHHcCceeeEEEEe
Q psy16545 562 VEARREGDIV-SMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 562 ~~~~~~~~~~-~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
..|.++.+.. ...+|++|++++|||+|+++++.
T Consensus 312 ~~p~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e 345 (377)
T 2q1s_A 312 RLPKRPWDNSGKRFGSPEKARRELGFSADVSIDD 345 (377)
T ss_dssp CCCCCGGGCC-CCCCCCHHHHHHHCCCCCCCHHH
T ss_pred eCCCCccccccccccCHHHHHHHcCCCCCCCHHH
Confidence 7666655566 78899999999999999988764
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=239.86 Aligned_cols=265 Identities=21% Similarity=0.259 Sum_probs=192.4
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.+.+.+.++++ ++|+|||+|+...... ......++.|+.++.+++++|++.+++||||+||.+|||
T Consensus 56 ~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A~~~~~~~--~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg 131 (347)
T 4id9_A 56 TGGEEVVGSLEDGQALSDAIM--GVSAVLHLGAFMSWAP--ADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYP 131 (347)
T ss_dssp SCCSEEESCTTCHHHHHHHHT--TCSEEEECCCCCCSSG--GGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTT
T ss_pred CCccEEecCcCCHHHHHHHHh--CCCEEEECCcccCcch--hhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhC
Confidence 357889999999999999998 8999999999765433 334789999999999999999999999999999999999
Q ss_pred C--CCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCc
Q psy16545 332 E--PQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPV 408 (600)
Q Consensus 332 ~--~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~ 408 (600)
. ....+++|+.+..|. ++|+.+| ..+|.+++.+.+.++++++++||+. +++..... ..
T Consensus 132 ~~~~~~~~~~E~~~~~~~-~~Y~~sK---~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~---------------~~ 192 (347)
T 4id9_A 132 ENRPEFLPVTEDHPLCPN-SPYGLTK---LLGEELVRFHQRSGAMETVILRFSHTQDATELLD---------------ED 192 (347)
T ss_dssp TTSCSSSSBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTC---------------TT
T ss_pred CCCCCCCCcCCCCCCCCC-ChHHHHH---HHHHHHHHHHHHhcCCceEEEccceEeecccccc---------------cc
Confidence 8 567789999988775 8999999 8899999999999999999999987 41100000 00
Q ss_pred ceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhh
Q psy16545 409 PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLR 488 (600)
Q Consensus 409 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 488 (600)
.+..||++..... + ....... ...+..++..+ ..+.++++. +++.+. +
T Consensus 193 ---~~~~Gp~~~~~~~-~-~~~~~~~---------------~~~~~~~~~~~--~~~~~~~~~------g~~~~~----~ 240 (347)
T 4id9_A 193 ---SFFSGPRFFLRPR-I-HQQQNFG---------------NAAIAELLQSR--DIGEPSHIL------ARNENG----R 240 (347)
T ss_dssp ---SSSHHHHHBHHHH-H-HHHHHHT---------------CHHHHHHHHHH--CCSSCCEEE------EECTTC----C
T ss_pred ---cccCCCCcccccc-c-ccccccc---------------hhHHHHHHHHH--HcCCCeEEe------CCCCcc----c
Confidence 0000221100000 0 0000000 00011111111 124444431 333433 7
Q ss_pred hh----hhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC-CceeEeEcCCCCCccHHHHHHHHhhhcCCccccccc
Q psy16545 489 TF----ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP-VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVE 563 (600)
Q Consensus 489 ~f----i~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~-~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~ 563 (600)
+| +| ++|+++++..++..+ ..+++||+++++.+|+.|+++.+++.+|.+.++...
T Consensus 241 ~~~~~~i~--------------------v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~ 300 (347)
T 4id9_A 241 PFRMHITD--------------------TRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDF 300 (347)
T ss_dssp BCEECEEE--------------------HHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEEC
T ss_pred CCccCcEe--------------------HHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeC
Confidence 77 77 999999999998876 558999999999999999999999999988777665
Q ss_pred CCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 564 ARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 564 ~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+.++. ...+|++|++++|||+|+++++.
T Consensus 301 p~~~~---~~~~d~~k~~~~lG~~p~~~~~~ 328 (347)
T 4id9_A 301 PGDGV---YYHTSNERIRNTLGFEAEWTMDR 328 (347)
T ss_dssp SSCCC---BCCBCCHHHHHHHCCCCCCCHHH
T ss_pred CCccc---ccccCHHHHHHHhCCCCCCCHHH
Confidence 55433 67889999999999999998864
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-26 Score=236.31 Aligned_cols=247 Identities=23% Similarity=0.289 Sum_probs=191.1
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCC-CEEEEecCccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV-YQLVFSSSCTV 329 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~r~v~~SS~~v 329 (600)
+.+++++.+|+.+.+.+.+++. ++|+|||+|+......+..++...++.|+.++.+++++|.+.+. +||||+||.++
T Consensus 53 ~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v 130 (336)
T 2hun_A 53 DPRYTFVKGDVADYELVKELVR--KVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEV 130 (336)
T ss_dssp CTTEEEEECCTTCHHHHHHHHH--TCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGG
T ss_pred CCceEEEEcCCCCHHHHHHHhh--CCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHH
Confidence 3578999999999999999886 89999999998654445567888999999999999999998875 79999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCc
Q psy16545 330 YGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPV 408 (600)
Q Consensus 330 Yg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~ 408 (600)
||.....+++|+++..+. +.|+.+| ..+|.+++.+...++++++++||+. +|++..... +
T Consensus 131 yg~~~~~~~~E~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~--~------------- 191 (336)
T 2hun_A 131 YGDILKGSFTENDRLMPS-SPYSATK---AASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEK--L------------- 191 (336)
T ss_dssp GCCCSSSCBCTTBCCCCC-SHHHHHH---HHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTS--H-------------
T ss_pred HCCCCCCCcCCCCCCCCC-CccHHHH---HHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCc--h-------------
Confidence 998766789999887765 8999999 8899999999988899999999887 554432100 0
Q ss_pred ceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhh
Q psy16545 409 PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLR 488 (600)
Q Consensus 409 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 488 (600)
+..++..+ ..+.++++. +++.+. +
T Consensus 192 --------------------------------------------~~~~~~~~--~~~~~~~~~------~~~~~~----~ 215 (336)
T 2hun_A 192 --------------------------------------------IPKTIIRA--SLGLKIPIY------GTGKNV----R 215 (336)
T ss_dssp --------------------------------------------HHHHHHHH--HTTCCEEEE------TC---C----E
T ss_pred --------------------------------------------HHHHHHHH--HcCCCceEe------CCCCce----e
Confidence 11111111 124444431 333333 7
Q ss_pred hhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccc-ccccCCCC
Q psy16545 489 TFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP-YIVEARRE 567 (600)
Q Consensus 489 ~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~-~~~~~~~~ 567 (600)
+|+| ++|+++++..++.....+++||+++++.+|+.|+++.+++.+|.+.+ +.+.+.++
T Consensus 216 ~~i~--------------------v~Dva~~~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 275 (336)
T 2hun_A 216 DWLY--------------------VEDHVRAIELVLLKGESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVEDRP 275 (336)
T ss_dssp EEEE--------------------HHHHHHHHHHHHHHCCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCCT
T ss_pred eeEE--------------------HHHHHHHHHHHHhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCCCC
Confidence 8888 88889998888765556789999999999999999999999997643 33444444
Q ss_pred CCccccccChHHHHHHcCceeeEEEEe
Q psy16545 568 GDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 568 ~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+......+|++|++++|||+|+++++.
T Consensus 276 ~~~~~~~~d~~k~~~~lG~~p~~~~~~ 302 (336)
T 2hun_A 276 GHDLRYSLDSWKITRDLKWRPKYTFDE 302 (336)
T ss_dssp TCCCCCCBCCHHHHHHHCCCCSSCHHH
T ss_pred CchhhhcCCHHHHHHHhCCCCCCCHHH
Confidence 444566789999999999999988764
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-26 Score=239.60 Aligned_cols=244 Identities=19% Similarity=0.220 Sum_probs=189.2
Q ss_pred hCCceeEEEeecCChhhHHHH-hhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcc
Q psy16545 250 TGKKVDFYSCDLVDKNRLGEI-FAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCT 328 (600)
Q Consensus 250 ~~~~v~~i~~Dl~~~~~l~~~-l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~ 328 (600)
.+.+++++.+|+.+++.+.++ .. ++|+|||+|+... .+..++...++.|+.++.+++++|++.+++ |||+||.+
T Consensus 66 ~~~~~~~~~~Dl~d~~~~~~~~~~--~~D~vih~A~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~ 140 (362)
T 3sxp_A 66 IGFKGEVIAADINNPLDLRRLEKL--HFDYLFHQAAVSD--TTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAG 140 (362)
T ss_dssp TTCCSEEEECCTTCHHHHHHHTTS--CCSEEEECCCCCG--GGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGG
T ss_pred cccCceEEECCCCCHHHHHHhhcc--CCCEEEECCccCC--ccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHH
Confidence 355689999999999999888 44 8999999999653 356788999999999999999999999886 99999999
Q ss_pred cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCC
Q psy16545 329 VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKP 407 (600)
Q Consensus 329 vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~ 407 (600)
+||.... +++|+.+..|. ++|+.+| ..+|.+++.+... ++++++||++ +||+......
T Consensus 141 vyg~~~~-~~~E~~~~~p~-~~Y~~sK---~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~-------------- 199 (362)
T 3sxp_A 141 VYGNTKA-PNVVGKNESPE-NVYGFSK---LCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEK-------------- 199 (362)
T ss_dssp GGCSCCS-SBCTTSCCCCS-SHHHHHH---HHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGG--------------
T ss_pred HhCCCCC-CCCCCCCCCCC-ChhHHHH---HHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCc--------------
Confidence 9998776 89999998876 8999999 7899999988765 8999999977 6665432100
Q ss_pred cceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhh
Q psy16545 408 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLL 487 (600)
Q Consensus 408 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 487 (600)
....+..++..+ ..+.++++ .+++.+.
T Consensus 200 -----------------------------------------~~~~~~~~~~~~--~~~~~~~~------~~~g~~~---- 226 (362)
T 3sxp_A 200 -----------------------------------------TASMVLQLALGA--MAFKEVKL------FEFGEQL---- 226 (362)
T ss_dssp -----------------------------------------GSCHHHHHHHHH--HTTSEEEC------SGGGCCE----
T ss_pred -----------------------------------------chhHHHHHHHHH--HhCCCeEE------ECCCCeE----
Confidence 000011122211 12444333 1344444
Q ss_pred hhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCC-
Q psy16545 488 RTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARR- 566 (600)
Q Consensus 488 ~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~- 566 (600)
++|+| ++|+++++..++..+..+ +||+++++.+|+.|+++.+++.+| +.++...+.+
T Consensus 227 ~~~i~--------------------v~Dva~ai~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~ 284 (362)
T 3sxp_A 227 RDFVY--------------------IEDVIQANVKAMKAQKSG-VYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPY 284 (362)
T ss_dssp EECEE--------------------HHHHHHHHHHHTTCSSCE-EEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC---
T ss_pred EccEE--------------------HHHHHHHHHHHHhcCCCC-EEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCC
Confidence 88888 999999999999877666 999999999999999999999999 7777777765
Q ss_pred CCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 567 EGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 567 ~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
........+|++|+++.|||+|+++++.
T Consensus 285 ~~~~~~~~~d~~k~~~~lG~~p~~~l~e 312 (362)
T 3sxp_A 285 AFFQKHTQAHIEPTILDLDYTPLYDLES 312 (362)
T ss_dssp ----CCCCBCCHHHHHHHCCCCCCCHHH
T ss_pred cCcccceecCHHHHHHHhCCCCCCCHHH
Confidence 5667788999999999999999998765
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-26 Score=240.60 Aligned_cols=263 Identities=27% Similarity=0.444 Sum_probs=195.2
Q ss_pred eeEEEeecCChhhHHHHhhcCC-ccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccC
Q psy16545 254 VDFYSCDLVDKNRLGEIFAKHD-IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 332 (600)
Q Consensus 254 v~~i~~Dl~~~~~l~~~l~~~~-~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~ 332 (600)
++++.+|+.+.+.+.++++..+ +|+|||+|+......+..++...++.|+.++.+++++|++.+++||||+||.++||.
T Consensus 71 ~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~ 150 (397)
T 1gy8_A 71 AALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGN 150 (397)
T ss_dssp CEEEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBS
T ss_pred EEEEECCCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCC
Confidence 8899999999999999887666 999999999865544556788899999999999999999999999999999999997
Q ss_pred CC-------CCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhC
Q psy16545 333 PQ-------FLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTG 404 (600)
Q Consensus 333 ~~-------~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g 404 (600)
.. ..+++|+++..|. +.|+.+| ..+|.+++.+...++++++++||++ +|++....
T Consensus 151 ~~~~~~~~~~~~~~E~~~~~p~-~~Y~~sK---~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~------------- 213 (397)
T 1gy8_A 151 PTMGSVSTNAEPIDINAKKSPE-SPYGESK---LIAERMIRDCAEAYGIKGICLRYFNACGAHEDGD------------- 213 (397)
T ss_dssp CCC-----CCCCBCTTSCCBCS-SHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSS-------------
T ss_pred CCcccccccccCcCccCCCCCC-CchHHHH---HHHHHHHHHHHHHHCCcEEEEeccceeCCCcccc-------------
Confidence 65 5789999988765 8999999 8899999999988899999999987 66543211
Q ss_pred CCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHH-HHHHH-hCCC----------Cceee
Q psy16545 405 NKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLR-TFERV-TGKP----------VPYIF 472 (600)
Q Consensus 405 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~-~~~~~-~~~~----------~~~~~ 472 (600)
+|+.... ....+..++. .+.+. .+.. .++.+
T Consensus 214 ----------~g~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (397)
T 1gy8_A 214 ----------IGEHYQG---------------------------STHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPI 256 (397)
T ss_dssp ----------CSCCSTT---------------------------CCSHHHHHHHHHHHHHSCC-----------CCCEEE
T ss_pred ----------ccccccc---------------------------hhHHHHHHHHHHHHHHHhcCccccccccccCCCcee
Confidence 1211000 0000111110 00011 1111 12222
Q ss_pred cc--CCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCC------ce---eEeEcCCCCCc
Q psy16545 473 YN--LGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV------PY---IFYNLGTGQGT 541 (600)
Q Consensus 473 ~~--~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~------~~---~~~nl~~~~~~ 541 (600)
++ +..+++.+. ++|+| |+|+++++..++.... .+ ++||+++++.+
T Consensus 257 ~g~~~~~~~g~~~----~~~v~--------------------v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~ 312 (397)
T 1gy8_A 257 FGTDYPTPDGTCV----RDYVH--------------------VCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGY 312 (397)
T ss_dssp ECSCSSSTTSSCE----ECEEE--------------------HHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCE
T ss_pred ecCcccCCCCCee----EeeEe--------------------HHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcc
Confidence 11 111244444 88988 8888888887775321 13 89999999999
Q ss_pred cHHHHHHHHhhhcCCcccccccCCCCCCccccccChHHHHHHcCceeeE-EEEe
Q psy16545 542 SVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARC-TVKI 594 (600)
Q Consensus 542 s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~-~l~~ 594 (600)
|+.|+++.+.+.+|.+.++...+.+.++.....+|++|++++|||+|++ +++.
T Consensus 313 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e 366 (397)
T 1gy8_A 313 SVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEA 366 (397)
T ss_dssp EHHHHHHHHHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHH
T ss_pred cHHHHHHHHHHHhCCCCCeeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHH
Confidence 9999999999999988777766666667778889999999999999998 7754
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-26 Score=237.88 Aligned_cols=214 Identities=40% Similarity=0.596 Sum_probs=181.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
.|||++|++|+++.+.. ...+.++++++|. .+|++|.+++.+ +++..
T Consensus 9 lVTGatG~iG~~l~~~L--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~~~ 77 (341)
T 3enk_A 9 LVTGGAGYIGSHTAVEL--LAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALAR---------IFDAH 77 (341)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHH---------HHHHS
T ss_pred EEecCCcHHHHHHHHHH--HHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHH---------HHhcc
Confidence 58999999999996532 2223344443331 689999999988 55545
Q ss_pred CCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHH
Q psy16545 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKT 145 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~s 145 (600)
++|+||||||.........++...+++|+.++.+++++|++.++++||++||.++||.....+++|+.+. .|.++|+.|
T Consensus 78 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~-~~~~~Y~~s 156 (341)
T 3enk_A 78 PITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPL-SATNPYGQT 156 (341)
T ss_dssp CCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCC-BCSSHHHHH
T ss_pred CCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCC-CCCChhHHH
Confidence 7999999999876554556777899999999999999999999999999999999998888899999999 899999999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEec------CCccccc
Q psy16545 146 KHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG------ADYETED 219 (600)
Q Consensus 146 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g------~g~~~~~ 219 (600)
|.++|++++.++.++++++++++||++||||+..+.+|+...+....+++.+.+.+.+..++++++| +|.+.|+
T Consensus 157 K~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 236 (341)
T 3enk_A 157 KLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRD 236 (341)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEEC
T ss_pred HHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEe
Confidence 9999999999998875699999999999999988888887777667889999888887778899999 8999999
Q ss_pred CcceEEeeeccccc
Q psy16545 220 GTGKVVAIDNFVNS 233 (600)
Q Consensus 220 ~~~v~d~v~~~~~a 233 (600)
++|++|+++.+..+
T Consensus 237 ~i~v~Dva~a~~~~ 250 (341)
T 3enk_A 237 YIHVVDLARGHIAA 250 (341)
T ss_dssp EEEHHHHHHHHHHH
T ss_pred eEEHHHHHHHHHHH
Confidence 99999998866544
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.6e-26 Score=235.08 Aligned_cols=246 Identities=20% Similarity=0.280 Sum_probs=191.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
+.+++++.+|+.+.+.+.++++ ++|+|||+|+......+..++...++.|+.++.+++++|.+.++ ||||+||.++|
T Consensus 53 ~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vy 129 (348)
T 1oc2_A 53 GDRVELVVGDIADAELVDKLAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVY 129 (348)
T ss_dssp SSSEEEEECCTTCHHHHHHHHT--TCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGG
T ss_pred cCCeEEEECCCCCHHHHHHHhh--cCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEeccccee
Confidence 4578999999999999999998 77999999998654445567888999999999999999999988 99999999999
Q ss_pred cCCCC------------CCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHH
Q psy16545 331 GEPQF------------LPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLR 397 (600)
Q Consensus 331 g~~~~------------~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~ 397 (600)
|.... .+++|+++..|. ++|+.+| ..+|.+++.+...++++++++||+. +|++..... +
T Consensus 130 g~~~~~~~~~~~~~~~~~~~~E~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~--~-- 201 (348)
T 1oc2_A 130 GDLPLREDLPGHGEGPGEKFTAETNYNPS-SPYSSTK---AASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEK--F-- 201 (348)
T ss_dssp CCBCCGGGSTTTTCSTTSSBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTS--H--
T ss_pred CCCcccccccccccccCCCcCCCCCCCCC-CccHHHH---HHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccc--h--
Confidence 86532 678999887665 8999999 7899999999988899999999987 555432100 0
Q ss_pred HHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCC
Q psy16545 398 TFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGT 477 (600)
Q Consensus 398 ~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (600)
+..++..+ ..+.++++.
T Consensus 202 -------------------------------------------------------~~~~~~~~--~~~~~~~~~------ 218 (348)
T 1oc2_A 202 -------------------------------------------------------IPRQITNI--LAGIKPKLY------ 218 (348)
T ss_dssp -------------------------------------------------------HHHHHHHH--HHTCCCEEE------
T ss_pred -------------------------------------------------------HHHHHHHH--HcCCCceEe------
Confidence 11111111 124444431
Q ss_pred CCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCc
Q psy16545 478 GQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP 557 (600)
Q Consensus 478 g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~ 557 (600)
+++.+. ++|+| ++|+++++..++..+..+++||+++++.+|+.|+++.+.+.+|.+
T Consensus 219 ~~~~~~----~~~i~--------------------v~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 274 (348)
T 1oc2_A 219 GEGKNV----RDWIH--------------------TNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQP 274 (348)
T ss_dssp TTSCCE----EECEE--------------------HHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred cCCCce----EeeEE--------------------HHHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCC
Confidence 333333 78888 888899888887655567899999999999999999999999976
Q ss_pred cc-ccccCCCCCCccccccChHHHHHHcCceeeEE-EEe
Q psy16545 558 VP-YIVEARREGDIVSMYANTDLAQRELGWSARCT-VKI 594 (600)
Q Consensus 558 ~~-~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~-l~~ 594 (600)
.+ +.+.+.++.......+|++|++++|||+|+++ ++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~ 313 (348)
T 1oc2_A 275 KDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSE 313 (348)
T ss_dssp TTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHH
T ss_pred ccccccCCCCCCcccccccCHHHHHHHcCCCCCCCcHHH
Confidence 53 34444445555567789999999999999987 754
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.3e-27 Score=243.72 Aligned_cols=253 Identities=18% Similarity=0.306 Sum_probs=192.8
Q ss_pred CceeEEEeecC-ChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 252 KKVDFYSCDLV-DKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~-~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
.+++++.+|+. +.+.+.++++ ++|+|||+|+......+..++...++.|+.++.+++++|++.+ +||||+||.+||
T Consensus 69 ~~v~~~~~Dl~~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vy 145 (372)
T 3slg_A 69 ERMHFFEGDITINKEWVEYHVK--KCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVY 145 (372)
T ss_dssp TTEEEEECCTTTCHHHHHHHHH--HCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGG
T ss_pred CCeEEEeCccCCCHHHHHHHhc--cCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHh
Confidence 57999999999 9999999998 8999999999877666677889999999999999999999999 999999999999
Q ss_pred cCCCCCCCCCCCCCC------CCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHh
Q psy16545 331 GEPQFLPITEDHPTG------NIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVT 403 (600)
Q Consensus 331 g~~~~~~~~E~~~~~------~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~ 403 (600)
|.....+++|+++.. .+.++|+.+| ..+|.+++.+... +++++++||++ +|++....
T Consensus 146 g~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK---~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~------------ 209 (372)
T 3slg_A 146 GMCADEQFDPDASALTYGPINKPRWIYACSK---QLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSI------------ 209 (372)
T ss_dssp BSCCCSSBCTTTCCEEECCTTCTTHHHHHHH---HHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCT------------
T ss_pred CCCCCCCCCccccccccCCCCCCCCcHHHHH---HHHHHHHHHHHHC-CCCEEEEccccccCCCcccc------------
Confidence 988777888887541 2236899999 8899999999887 99999999987 55543321
Q ss_pred CCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccc
Q psy16545 404 GNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSV 483 (600)
Q Consensus 404 g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 483 (600)
|++.. +....+..++..+. .+.++++. +++.+.
T Consensus 210 -----------~~~~~----------------------------~~~~~~~~~~~~~~--~~~~~~~~------~~g~~~ 242 (372)
T 3slg_A 210 -----------YTPKE----------------------------GSSRVVTQFLGHIV--RGENISLV------DGGSQK 242 (372)
T ss_dssp -----------TCSBS----------------------------CSCHHHHHHHHHHH--HTCCEEEG------GGGCCE
T ss_pred -----------ccccc----------------------------ccchHHHHHHHHHH--cCCCcEEe------CCCceE
Confidence 01100 00001222333222 35555541 344444
Q ss_pred hhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC---CceeEeEcCC-CCCccHHHHHHHHhhhcCCccc
Q psy16545 484 LQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP---VPYIFYNLGT-GQGTSVLQLLRTFERVTGKPVP 559 (600)
Q Consensus 484 ~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~---~~~~~~nl~~-~~~~s~~e~~~~~~~~~g~~~~ 559 (600)
++|+| ++|+++++..++..+ ..+++||+++ ++.+|+.|+++.+++.+|.+.+
T Consensus 243 ----~~~i~--------------------v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~ 298 (372)
T 3slg_A 243 ----RAFTY--------------------VDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPE 298 (372)
T ss_dssp ----EECEE--------------------HHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTT
T ss_pred ----EEEEE--------------------HHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcc
Confidence 88888 899999999988765 3689999999 5899999999999999987654
Q ss_pred ccccCCC---------------CCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 560 YIVEARR---------------EGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 560 ~~~~~~~---------------~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+...+.+ ..+.....+|++|++++|||+|+++++.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e 348 (372)
T 3slg_A 299 YADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDD 348 (372)
T ss_dssp THHHHHTCCEEEC-------------CCCCBCCHHHHHHHTCCCCCCHHH
T ss_pred cccccccceeeeccccccccCCccccceeecCHHHHHHHcCCCCCCCHHH
Confidence 4332211 1245567889999999999999998864
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.6e-26 Score=233.79 Aligned_cols=247 Identities=20% Similarity=0.283 Sum_probs=188.7
Q ss_pred eecCChhhHHHHhhcCCccEEEEcccccCc-cccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCCCC
Q psy16545 259 CDLVDKNRLGEIFAKHDIDCVIHFAAVKAV-GESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLP 337 (600)
Q Consensus 259 ~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~-~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~~ 337 (600)
+|+.+.+.+.++++..++|+|||+|+.... .....++...++.|+.++.+++++|++.+++||||+||.++||.....+
T Consensus 39 ~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~ 118 (321)
T 1e6u_A 39 LNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQP 118 (321)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSS
T ss_pred CCccCHHHHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCC
Confidence 699999999998876679999999997542 2244678889999999999999999999999999999999999877778
Q ss_pred CCCCC----CCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEE
Q psy16545 338 ITEDH----PTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIF 412 (600)
Q Consensus 338 ~~E~~----~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~ 412 (600)
++|++ +..|..++|+.+| ..+|.+++.+.+.++++++++||+. +|+++....
T Consensus 119 ~~E~~~~~~~~~p~~~~Y~~sK---~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~-------------------- 175 (321)
T 1e6u_A 119 MAESELLQGTLEPTNEPYAIAK---IAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHP-------------------- 175 (321)
T ss_dssp BCGGGTTSSCCCGGGHHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCT--------------------
T ss_pred cCccccccCCCCCCCCccHHHH---HHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCC--------------------
Confidence 89987 4444335899999 7899999999988899999999987 554432100
Q ss_pred eeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHH--HhC-CCCceeeccCCCCCcccchhhhhh
Q psy16545 413 YNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFER--VTG-KPVPYIFYNLGTGQGTSVLQLLRT 489 (600)
Q Consensus 413 ~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~g~~~~~~~~~~~ 489 (600)
.....+..++..+.. ..| .++++ + +++.+. ++
T Consensus 176 -----------------------------------~~~~~~~~~~~~~~~~~~~g~~~~~~----~--~~g~~~----~~ 210 (321)
T 1e6u_A 176 -----------------------------------SNSHVIPALLRRFHEATAQKAPDVVV----W--GSGTPM----RE 210 (321)
T ss_dssp -----------------------------------TCSSHHHHHHHHHHHHHHHTCSEEEE----E--SCSCCE----EC
T ss_pred -----------------------------------CCCccHHHHHHHHHHhhhcCCCceEE----c--CCCCEE----EE
Confidence 000001222222221 123 34433 1 333333 88
Q ss_pred hhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCc---------eeEeEcCCCCCccHHHHHHHHhhhcCCcccc
Q psy16545 490 FERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP---------YIFYNLGTGQGTSVLQLLRTFERVTGKPVPY 560 (600)
Q Consensus 490 fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~---------~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~ 560 (600)
|+| ++|+++++..++..+.. +++||+++++++|+.|+++.+.+.+|.+.++
T Consensus 211 ~i~--------------------v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~ 270 (321)
T 1e6u_A 211 FLH--------------------VDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRV 270 (321)
T ss_dssp EEE--------------------HHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEE
T ss_pred eEE--------------------HHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCce
Confidence 888 88999999988876543 5899999999999999999999999987776
Q ss_pred cccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 561 IVEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 561 ~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
.+.+.++.......+|++|+++ |||+|+++++.
T Consensus 271 ~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~ 303 (321)
T 1e6u_A 271 VFDASKPDGTPRKLLDVTRLHQ-LGWYHEISLEA 303 (321)
T ss_dssp EEETTSCCCCSBCCBCCHHHHH-TTCCCCCCHHH
T ss_pred EeCCCCCCCcccccCCHHHHHh-cCCccCCcHHH
Confidence 6666655566678899999999 99999988764
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-25 Score=232.15 Aligned_cols=252 Identities=18% Similarity=0.246 Sum_probs=192.6
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCC---CEEEEecCc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV---YQLVFSSSC 327 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~---~r~v~~SS~ 327 (600)
+.+++++.+|+.+.+.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++.++ ++|||+||.
T Consensus 54 ~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~ 133 (372)
T 1db3_A 54 NPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTS 133 (372)
T ss_dssp -CCEEECCCCSSCHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG
T ss_pred CCceEEEECCCCCHHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCh
Confidence 35688999999999999999886568999999998765556678888999999999999999999988 899999999
Q ss_pred ccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHH-HHHHHHHHHhCC
Q psy16545 328 TVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVL-QLLRTFERVTGN 405 (600)
Q Consensus 328 ~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~-~~~~~~~~~~g~ 405 (600)
++||.....+++|+++..|. ++|+.+| ..+|.+++.+...++++++++|+++ +||+.+..+. ..+
T Consensus 134 ~v~g~~~~~~~~E~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~--------- 200 (372)
T 1db3_A 134 ELYGLVQEIPQKETTPFYPR-SPYAVAK---LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKI--------- 200 (372)
T ss_dssp GGGTTCCSSSBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHH---------
T ss_pred hhhCCCCCCCCCccCCCCCC-ChHHHHH---HHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHH---------
Confidence 99998777789999988775 8999999 7899999999998999999999887 5554332110 000
Q ss_pred CCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchh
Q psy16545 406 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQ 485 (600)
Q Consensus 406 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 485 (600)
..++..+ ..+.+..+.+ +++.+.
T Consensus 201 ------------------------------------------------~~~~~~~--~~g~~~~~~~-----g~~~~~-- 223 (372)
T 1db3_A 201 ------------------------------------------------TRAIANI--AQGLESCLYL-----GNMDSL-- 223 (372)
T ss_dssp ------------------------------------------------HHHHHHH--HTTSCCCEEE-----SCTTCE--
T ss_pred ------------------------------------------------HHHHHHH--HcCCCCceee-----cCCCce--
Confidence 0011111 1233222221 333333
Q ss_pred hhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccc---
Q psy16545 486 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIV--- 562 (600)
Q Consensus 486 ~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~--- 562 (600)
++|+| ++|+++++..++..+. +++||+++++.+|+.|+++.+.+.+|.+.++..
T Consensus 224 --~~~i~--------------------v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~ 280 (372)
T 1db3_A 224 --RDWGH--------------------AKDYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGV 280 (372)
T ss_dssp --ECCEE--------------------HHHHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGG
T ss_pred --eeeeE--------------------HHHHHHHHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccc
Confidence 88888 9999999999887653 589999999999999999999999997543211
Q ss_pred --------------------------cC--CCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 563 --------------------------EA--RREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 563 --------------------------~~--~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
.+ .++.+.....+|++|++++|||+|+++++.+
T Consensus 281 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~ 341 (372)
T 1db3_A 281 EEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREM 341 (372)
T ss_dssp GCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHH
T ss_pred cccccccccccccccccccccceeeccccccCCCchhhhccCHHHHHHHhCCccccCHHHH
Confidence 11 2334445677899999999999999988653
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.6e-26 Score=234.92 Aligned_cols=249 Identities=24% Similarity=0.322 Sum_probs=191.0
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc--CCC-------EE
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH--GVY-------QL 321 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~-------r~ 321 (600)
+.+++++.+|+.+.+.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++. +++ ||
T Consensus 49 ~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~i 128 (361)
T 1kew_A 49 SNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRF 128 (361)
T ss_dssp CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEE
T ss_pred CCCeEEEECCCCCHHHHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceE
Confidence 356899999999999999988766799999999986544455678889999999999999999998 887 99
Q ss_pred EEecCcccccCCCC--C--------CCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcc
Q psy16545 322 VFSSSCTVYGEPQF--L--------PITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGT 390 (600)
Q Consensus 322 v~~SS~~vYg~~~~--~--------~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~ 390 (600)
||+||.++||.... . +++|+.+..+. +.|+.+| ..+|.+++.++..++++++++||+. +|++...
T Consensus 129 v~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~ 204 (361)
T 1kew_A 129 HHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPS-SPYSASK---ASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP 204 (361)
T ss_dssp EEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT
T ss_pred EEeCCHHHhCCCcccccccccccCCCCCCCCCCCCC-CccHHHH---HHHHHHHHHHHHHhCCcEEEEeeceeECCCCCc
Confidence 99999999986532 1 78899887665 8999999 7899999999988899999999887 5543321
Q ss_pred hHHHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCce
Q psy16545 391 SVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPY 470 (600)
Q Consensus 391 ~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (600)
.. .+..++..+ ..+.++++
T Consensus 205 ~~-----------------------------------------------------------~~~~~~~~~--~~~~~~~~ 223 (361)
T 1kew_A 205 EK-----------------------------------------------------------LIPLVILNA--LEGKPLPI 223 (361)
T ss_dssp TS-----------------------------------------------------------HHHHHHHHH--HHTCCEEE
T ss_pred cc-----------------------------------------------------------HHHHHHHHH--HcCCCceE
Confidence 00 011111211 12445443
Q ss_pred eeccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHH
Q psy16545 471 IFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF 550 (600)
Q Consensus 471 ~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~ 550 (600)
. +++.+. ++|+| ++|+++++..++.....+++||+++++.+|+.|+++.+
T Consensus 224 ~------~~~~~~----~~~i~--------------------v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i 273 (361)
T 1kew_A 224 Y------GKGDQI----RDWLY--------------------VEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTI 273 (361)
T ss_dssp E------TTSCCE----EEEEE--------------------HHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHH
T ss_pred c------CCCcee----EeeEE--------------------HHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHH
Confidence 1 333333 78888 88899998888765556789999999999999999999
Q ss_pred hhhcCCccc--------ccccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 551 ERVTGKPVP--------YIVEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 551 ~~~~g~~~~--------~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
++.+|.+.+ +.+.+.++.......+|++|++++|||+|+++++.
T Consensus 274 ~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e 325 (361)
T 1kew_A 274 CDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFES 325 (361)
T ss_dssp HHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCHHH
T ss_pred HHHhCCcCccccccccceeecCCCCcccceeecCHHHHHHHhCCCCccCHHH
Confidence 999986532 12233344444567889999999999999988764
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-25 Score=232.14 Aligned_cols=250 Identities=16% Similarity=0.206 Sum_probs=191.5
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCC---CEEEEecCcc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV---YQLVFSSSCT 328 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~---~r~v~~SS~~ 328 (600)
.+++++.+|+.+.+.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++.++ ++|||+||.+
T Consensus 79 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~ 158 (375)
T 1t2a_A 79 GNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSE 158 (375)
T ss_dssp -CEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG
T ss_pred CCceEEEccCCCHHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchh
Confidence 4688999999999999999886568999999998655445668888999999999999999999987 8999999999
Q ss_pred cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHH-HHHHHHHHHhCCC
Q psy16545 329 VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVL-QLLRTFERVTGNK 406 (600)
Q Consensus 329 vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~-~~~~~~~~~~g~~ 406 (600)
+||.....+++|+++..|. ++|+.+| ..+|.+++.+...++++++++|+++ +||+.+..+. ..
T Consensus 159 ~~~~~~~~~~~E~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~----------- 223 (375)
T 1t2a_A 159 LYGKVQEIPQKETTPFYPR-SPYGAAK---LYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRK----------- 223 (375)
T ss_dssp GTCSCSSSSBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHH-----------
T ss_pred hhCCCCCCCCCccCCCCCC-ChhHHHH---HHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHH-----------
Confidence 9998777789999988775 8999999 7799999999988999999999887 5554332110 00
Q ss_pred CcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhh
Q psy16545 407 PVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQL 486 (600)
Q Consensus 407 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 486 (600)
+..++..+ ..+.+..+.+ +++.+.
T Consensus 224 ----------------------------------------------~~~~~~~~--~~g~~~~~~~-----g~~~~~--- 247 (375)
T 1t2a_A 224 ----------------------------------------------ISRSVAKI--YLGQLECFSL-----GNLDAK--- 247 (375)
T ss_dssp ----------------------------------------------HHHHHHHH--HHTSCSCEEE-----SCTTCE---
T ss_pred ----------------------------------------------HHHHHHHH--HcCCCceeEe-----CCCCce---
Confidence 00111111 1243322221 333433
Q ss_pred hhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccccc-----
Q psy16545 487 LRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYI----- 561 (600)
Q Consensus 487 ~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~----- 561 (600)
++|+| ++|+++++..++..+. .++||+++++.+|+.|+++.+++.+|.+.++.
T Consensus 248 -~~~i~--------------------v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p 305 (375)
T 1t2a_A 248 -RDWGH--------------------AKDYVEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNEN 305 (375)
T ss_dssp -ECCEE--------------------HHHHHHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGG
T ss_pred -eeeEE--------------------HHHHHHHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCccccccccc
Confidence 88888 8899999988886543 47999999999999999999999999764321
Q ss_pred --------------ccC--CCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 562 --------------VEA--RREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 562 --------------~~~--~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
..+ .++.+.....+|++|++++|||+|+++++.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e 354 (375)
T 1t2a_A 306 EVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDE 354 (375)
T ss_dssp CEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHH
T ss_pred ccccccccccceeecCcccCCcccchhhcCCHHHHHHhcCCCccCCHHH
Confidence 111 234445567789999999999999988864
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=233.89 Aligned_cols=249 Identities=21% Similarity=0.315 Sum_probs=185.7
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecCccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTV 329 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~r~v~~SS~~v 329 (600)
+.+++++.+|+.+++.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++.+ ++||||+||.+|
T Consensus 56 ~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v 135 (357)
T 1rkx_A 56 ADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKC 135 (357)
T ss_dssp TTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGG
T ss_pred CCceEEEEccccCHHHHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHH
Confidence 4568999999999999999988555899999999754444566788899999999999999999986 899999999999
Q ss_pred ccCCCC-CCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---------CCCCeeEeecc-cCCCCcchHHHHHHH
Q psy16545 330 YGEPQF-LPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---------GNKPVPYIFYN-LGTGQGTSVLQLLRT 398 (600)
Q Consensus 330 Yg~~~~-~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---------~~~~~~~r~~~-~g~~~~~~~~~~~~~ 398 (600)
||.... .+++|+++..+. +.|+.+| ..+|.+++.+...+ +++++++||+. +|+++...
T Consensus 136 yg~~~~~~~~~E~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~------- 204 (357)
T 1rkx_A 136 YDNKEWIWGYRENEAMGGY-DPYSNSK---GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL------- 204 (357)
T ss_dssp BCCCCSSSCBCTTSCBCCS-SHHHHHH---HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-------
T ss_pred hCCCCcCCCCCCCCCCCCC-CccHHHH---HHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc-------
Confidence 997653 467888877664 8999999 78999999998765 99999999987 55433110
Q ss_pred HHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCC
Q psy16545 399 FERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTG 478 (600)
Q Consensus 399 ~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 478 (600)
...+..++..+. .+.++.+ +.+
T Consensus 205 ---------------------------------------------------~~~~~~~~~~~~--~g~~~~~-----~~~ 226 (357)
T 1rkx_A 205 ---------------------------------------------------DRIVPDILRAFE--QSQPVII-----RNP 226 (357)
T ss_dssp ---------------------------------------------------SCHHHHHHHHHH--TTCCEEC-----SCT
T ss_pred ---------------------------------------------------ccHHHHHHHHHh--cCCCEEE-----CCC
Confidence 000111222221 2444332 222
Q ss_pred CcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCC-----CCceeEeEcCCC--CCccHHHHHHHHh
Q psy16545 479 QGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK-----PVPYIFYNLGTG--QGTSVLQLLRTFE 551 (600)
Q Consensus 479 ~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~-----~~~~~~~nl~~~--~~~s~~e~~~~~~ 551 (600)
.+. ++|+| ++|+++++..++.. ...+++||++++ +.+|++|+++.++
T Consensus 227 --~~~----~~~v~--------------------v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~ 280 (357)
T 1rkx_A 227 --HAI----RPWQH--------------------VLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMV 280 (357)
T ss_dssp --TCE----ECCEE--------------------THHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHH
T ss_pred --CCe----eccEe--------------------HHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHH
Confidence 223 78888 77888887776642 235789999984 6899999999999
Q ss_pred hhcCCcccccccCC-CCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 552 RVTGKPVPYIVEAR-REGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 552 ~~~g~~~~~~~~~~-~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+.+|.+.++...+. ++.+.....+|++|++++|||+|+++++.
T Consensus 281 ~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e 324 (357)
T 1rkx_A 281 KYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWNLNT 324 (357)
T ss_dssp HHHCTTCCEEC-------CCCCCCBCCHHHHHHHCCCCCCCHHH
T ss_pred HHhCCCCccccCCCCCCcCcccccCCHHHHHHHhCCCcCCcHHH
Confidence 99998766544432 33455677899999999999999998864
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=232.58 Aligned_cols=251 Identities=20% Similarity=0.276 Sum_probs=191.2
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEecCcccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY-QLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~-r~v~~SS~~vY 330 (600)
.+++++.+|+.+.+.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++.+++ ||||+||.++|
T Consensus 50 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~ 129 (347)
T 1orr_A 50 GNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVY 129 (347)
T ss_dssp CCCEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGG
T ss_pred CceEEEEcCCCCHHHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHh
Confidence 35889999999999999999844499999999986554455688889999999999999999999885 99999999999
Q ss_pred cCCCCCC----------------CCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHH
Q psy16545 331 GEPQFLP----------------ITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVL 393 (600)
Q Consensus 331 g~~~~~~----------------~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~ 393 (600)
|.....+ ++|+.+..|. +.|+.+| ..+|.+++.+...++++++++||+. +|++.....
T Consensus 130 g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~-~~Y~~sK---~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~- 204 (347)
T 1orr_A 130 GDLEQYKYNETETRYTCVDKPNGYDESTQLDFH-SPYGCSK---GAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATY- 204 (347)
T ss_dssp TTCTTSCEEECSSCEEETTCTTCBCTTSCCCCC-HHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBT-
T ss_pred CCCCcCCcccccccccccccccCccccCCCCCC-CchHHHH---HHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCC-
Confidence 9654332 5677776654 8999999 7899999999988899999999987 554321100
Q ss_pred HHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCC-----CC
Q psy16545 394 QLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK-----PV 468 (600)
Q Consensus 394 ~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~-----~~ 468 (600)
....+..++..+.. +. ++
T Consensus 205 -------------------------------------------------------~~~~~~~~~~~~~~--~~~~~~~~~ 227 (347)
T 1orr_A 205 -------------------------------------------------------DQGWVGWFCQKAVE--IKNGINKPF 227 (347)
T ss_dssp -------------------------------------------------------TBCHHHHHHHHHHH--HHTTCCCCE
T ss_pred -------------------------------------------------------cCcHHHHHHHHHHh--CcccCCCCe
Confidence 00001111121111 11 33
Q ss_pred ceeeccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCC--CCceeEeEcCCCC--CccHH
Q psy16545 469 PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK--PVPYIFYNLGTGQ--GTSVL 544 (600)
Q Consensus 469 ~~~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~--~~~~~~~nl~~~~--~~s~~ 544 (600)
.+ + +++.+. ++|+| ++|+++++..++.. ...+++||+++++ ++|++
T Consensus 228 ~~----~--g~g~~~----~~~i~--------------------v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~ 277 (347)
T 1orr_A 228 TI----S--GNGKQV----RDVLH--------------------AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLL 277 (347)
T ss_dssp EE----E--SSSCCE----EECEE--------------------HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHH
T ss_pred EE----e--cCCcce----EeeEE--------------------HHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHH
Confidence 22 1 344444 88888 88889988887764 2347899999987 49999
Q ss_pred HHHHHHhhhcCCcccccccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 545 QLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 545 e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
|+++.+.+.+|.+.++...+.++.+.....+|++|++++|||+|+++++.
T Consensus 278 e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e 327 (347)
T 1orr_A 278 ELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKD 327 (347)
T ss_dssp HHHHHHHHHHTCCCCEEEECCCSSCCSEECBCCHHHHHHHCCCCCSCHHH
T ss_pred HHHHHHHHHhCCCCCceeCCCCCCCcceeecCHHHHHHHHCCCccCCHHH
Confidence 99999999999887777777666666778899999999999999988764
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-25 Score=224.35 Aligned_cols=230 Identities=15% Similarity=0.116 Sum_probs=183.6
Q ss_pred eecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCCCCC
Q psy16545 259 CDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPI 338 (600)
Q Consensus 259 ~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~~~ 338 (600)
+|+.+.+.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++.++ ||||+||.++||.....++
T Consensus 40 ~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~ 118 (287)
T 3sc6_A 40 LDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGY 118 (287)
T ss_dssp SCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCB
T ss_pred cCCCCHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCC
Confidence 799999999999986679999999998876666778999999999999999999999988 8999999999998888899
Q ss_pred CCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEEeeCCC
Q psy16545 339 TEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGT 417 (600)
Q Consensus 339 ~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~ 417 (600)
+|+++..|. ++|+.+| ..+|.+++.+. .+++++||+. +|+++...+..
T Consensus 119 ~E~~~~~p~-~~Y~~sK---~~~E~~~~~~~----~~~~ilR~~~v~G~~~~~~~~~----------------------- 167 (287)
T 3sc6_A 119 DEFHNPAPI-NIYGASK---YAGEQFVKELH----NKYFIVRTSWLYGKYGNNFVKT----------------------- 167 (287)
T ss_dssp CTTSCCCCC-SHHHHHH---HHHHHHHHHHC----SSEEEEEECSEECSSSCCHHHH-----------------------
T ss_pred CCCCCCCCC-CHHHHHH---HHHHHHHHHhC----CCcEEEeeeeecCCCCCcHHHH-----------------------
Confidence 999998875 8999999 77899888764 4789999987 55443321111
Q ss_pred CCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhhhcCCC
Q psy16545 418 GQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP 497 (600)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~~ 497 (600)
++..+ ..+.++++ .+++. ++|+|
T Consensus 168 --------------------------------------~~~~~--~~~~~~~~------~~~~~------~~~i~----- 190 (287)
T 3sc6_A 168 --------------------------------------MIRLG--KEREEISV------VADQI------GSPTY----- 190 (287)
T ss_dssp --------------------------------------HHHHH--TTCSEEEE------ECSCE------ECCEE-----
T ss_pred --------------------------------------HHHHH--HcCCCeEe------ecCcc------cCceE-----
Confidence 11111 01333333 13332 78888
Q ss_pred ccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccccccc-----CCCCCCccc
Q psy16545 498 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVE-----ARREGDIVS 572 (600)
Q Consensus 498 ~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~-----~~~~~~~~~ 572 (600)
++|+++++..++..+. +++||+++++.+|+.|+++.+++.+|.+.++... +.+..++..
T Consensus 191 ---------------v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 254 (287)
T 3sc6_A 191 ---------------VADLNVMINKLIHTSL-YGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKY 254 (287)
T ss_dssp ---------------HHHHHHHHHHHHTSCC-CEEEECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSB
T ss_pred ---------------HHHHHHHHHHHHhCCC-CCeEEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCc
Confidence 9999999999998766 7899999999999999999999999987655443 334455667
Q ss_pred cccChHHHHHHcCceeeEEEEe
Q psy16545 573 MYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 573 ~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
..+|++|++ .|||+|+++++.
T Consensus 255 ~~~d~~k~~-~lg~~p~~~~~~ 275 (287)
T 3sc6_A 255 SIFQHNMLR-LNGFLQMPSWEE 275 (287)
T ss_dssp CCBCCHHHH-HTTCCCCCBHHH
T ss_pred ccccHHHHH-hhCCCCCccHHH
Confidence 889999999 799999998864
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.1e-26 Score=230.95 Aligned_cols=222 Identities=26% Similarity=0.425 Sum_probs=181.9
Q ss_pred CccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccc
Q psy16545 275 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLG 354 (600)
Q Consensus 275 ~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~s 354 (600)
++|+|||+|+.......+.++...++ |+.++.+++++|++.+++||||+||.++||.....+++|+++..|. +.|+.+
T Consensus 69 ~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~-~~Y~~s 146 (321)
T 3vps_A 69 DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPR-SPYAAS 146 (321)
T ss_dssp TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC-SHHHHH
T ss_pred cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCC-ChhHHH
Confidence 68999999998776666677777788 9999999999999999999999999999999888899999998875 899999
Q ss_pred hhhHHHHHHHHHHHHHHhCC-CCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHH
Q psy16545 355 TGQGTSVLQLLRTFERVTGN-KPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFER 432 (600)
Q Consensus 355 K~~~~~~E~~~~~~~~~~~~-~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 432 (600)
| ..+|.+++.+...+++ +++++||++ +|++.....
T Consensus 147 K---~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~---------------------------------------- 183 (321)
T 3vps_A 147 K---VGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDA---------------------------------------- 183 (321)
T ss_dssp H---HHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTS----------------------------------------
T ss_pred H---HHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCC----------------------------------------
Confidence 9 8899999999998999 999999987 555433210
Q ss_pred HhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchh
Q psy16545 433 VTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTS 512 (600)
Q Consensus 433 ~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~ 512 (600)
.+..++..+. .+.++++. +++.+. ++|+|
T Consensus 184 -------------------~~~~~~~~~~--~~~~~~~~------~~~~~~----~~~v~-------------------- 212 (321)
T 3vps_A 184 -------------------LVPRLCANLL--TRNELPVE------GDGEQR----RDFTY-------------------- 212 (321)
T ss_dssp -------------------HHHHHHHHHH--HHSEEEEE------TTSCCE----ECEEE--------------------
T ss_pred -------------------hHHHHHHHHH--cCCCeEEe------CCCCce----EceEE--------------------
Confidence 0111222221 23444431 334433 88888
Q ss_pred HHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCCCCCccccccChHHHHHHcCcee-eEE
Q psy16545 513 VLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSA-RCT 591 (600)
Q Consensus 513 v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p-~~~ 591 (600)
++|+++++..++..+..+ +||+++++.+|+.|+++.+. .+|.+.++...+.++.+.....+|++|++++|||+| +++
T Consensus 213 v~Dva~~~~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~ 290 (321)
T 3vps_A 213 ITDVVDKLVALANRPLPS-VVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPRPNEITEFRADTALQTRQIGERSGGIG 290 (321)
T ss_dssp HHHHHHHHHHGGGSCCCS-EEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCCTTCCSBCCBCCHHHHHHHCCCSCCCC
T ss_pred HHHHHHHHHHHHhcCCCC-eEEecCCCcccHHHHHHHHH-HhCCCCccccCCCCCCCcceeeccHHHHHHHhCCCCCcCC
Confidence 999999999999877666 99999999999999999999 999988888888777788889999999999999999 888
Q ss_pred EEe
Q psy16545 592 VKI 594 (600)
Q Consensus 592 l~~ 594 (600)
++.
T Consensus 291 ~~~ 293 (321)
T 3vps_A 291 IEE 293 (321)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=224.74 Aligned_cols=250 Identities=18% Similarity=0.274 Sum_probs=191.2
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCC-CEEEEecCcccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV-YQLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~r~v~~SS~~vY 330 (600)
.+++++.+|+.+.+.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++.++ +||||+||.++|
T Consensus 52 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vy 131 (345)
T 2z1m_A 52 NDVKIIHMDLLEFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMF 131 (345)
T ss_dssp TTEEECCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGG
T ss_pred CceeEEECCCCCHHHHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhc
Confidence 4688999999999999999886568999999998665555678889999999999999999999887 899999999999
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcc
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVP 409 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~ 409 (600)
|.....+++|+.+..|. ++|+.+| ..+|.+++.+...++++++++|+++ +||+...+.. .
T Consensus 132 g~~~~~~~~e~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~--~------------- 192 (345)
T 2z1m_A 132 GKVQEIPQTEKTPFYPR-SPYAVAK---LFGHWITVNYREAYNMFACSGILFNHESPLRGIEFV--T------------- 192 (345)
T ss_dssp CSCSSSSBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSH--H-------------
T ss_pred CCCCCCCCCccCCCCCC-ChhHHHH---HHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcch--h-------------
Confidence 98877789999887765 8999999 7899999999998899999999877 6654332210 0
Q ss_pred eEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHH-HhCCCCceeeccCCCCCcccchhhhh
Q psy16545 410 YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFER-VTGKPVPYIFYNLGTGQGTSVLQLLR 488 (600)
Q Consensus 410 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~ 488 (600)
..+...+.+ ..+.+..+.. +++.+. +
T Consensus 193 --------------------------------------------~~~~~~~~~~~~~~~~~~~~-----~~~~~~----~ 219 (345)
T 2z1m_A 193 --------------------------------------------RKITYSLARIKYGLQDKLVL-----GNLNAK----R 219 (345)
T ss_dssp --------------------------------------------HHHHHHHHHHHTTSCSCEEE-----SCTTCE----E
T ss_pred --------------------------------------------HHHHHHHHHHHcCCCCeeee-----CCCCce----e
Confidence 000011111 1232222211 333333 7
Q ss_pred hhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccccc-------
Q psy16545 489 TFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYI------- 561 (600)
Q Consensus 489 ~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~------- 561 (600)
+|+| ++|+++++..++..+. .++||+++++.+|+.|+++.+++.+|.+.++.
T Consensus 220 ~~~~--------------------v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~ 278 (345)
T 2z1m_A 220 DWGY--------------------APEYVEAMWLMMQQPE-PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEK 278 (345)
T ss_dssp CCEE--------------------HHHHHHHHHHHHTSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCE
T ss_pred eeEE--------------------HHHHHHHHHHHHhCCC-CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccc
Confidence 7888 9999999999887653 47999999999999999999999999864321
Q ss_pred ------------ccC--CCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 562 ------------VEA--RREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 562 ------------~~~--~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
..+ .++.+.....+|++|++++|||+|+++++.
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~ 325 (345)
T 2z1m_A 279 GIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMKKLGWKPRTTFDE 325 (345)
T ss_dssp EEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHH
T ss_pred cccccccccccccCcccCCCCCcceeecCHHHHHHHcCCcccCCHHH
Confidence 111 233444566789999999999999988764
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=228.88 Aligned_cols=263 Identities=22% Similarity=0.267 Sum_probs=186.9
Q ss_pred hhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChH---HHHHHHHHHHHHHHHHHHHcCC-CEEEEe
Q psy16545 249 FTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPL---MYYKNNLIATINLLEVMKSHGV-YQLVFS 324 (600)
Q Consensus 249 l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~---~~~~~Nv~gt~~ll~~~~~~~~-~r~v~~ 324 (600)
..+.+++++.+|+.+.+.+.++++..++|+|||+|+.........++. ..++.|+.++.+++++|++.++ +||||+
T Consensus 74 ~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~ 153 (404)
T 1i24_A 74 LTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKL 153 (404)
T ss_dssp HHCCCCEEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred ccCCceEEEECCCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 345678999999999999999988545999999999865544444554 4789999999999999999887 599999
Q ss_pred cCcccccCCCCCCCCCC--------------CCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCc
Q psy16545 325 SSCTVYGEPQFLPITED--------------HPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQG 389 (600)
Q Consensus 325 SS~~vYg~~~~~~~~E~--------------~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~ 389 (600)
||.++||... .+++|+ .+..|. ++|+.|| ..+|.+++.++..++++++++||++ +||++.
T Consensus 154 SS~~vyg~~~-~~~~E~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~ 228 (404)
T 1i24_A 154 GTMGEYGTPN-IDIEEGYITITHNGRTDTLPYPKQAS-SFYHLSK---VHDSHNIAFTCKAWGIRATDLNQGVVYGVKTD 228 (404)
T ss_dssp CCGGGGCCCS-SCBCSSEEEEEETTEEEEEECCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECEEECSCCT
T ss_pred CcHHHhCCCC-CCCCccccccccccccccccCCCCCC-ChhHHHH---HHHHHHHHHHHHhcCCeEEEEecceeeCCCCC
Confidence 9999999765 467775 344443 8999999 7789999999888899999999987 555432
Q ss_pred chHHHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEc-CCCC-cccHHHHHHHHHHHhCCC
Q psy16545 390 TSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNL-GTGQ-GTSVLQLLRTFERVTGKP 467 (600)
Q Consensus 390 ~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~-~~~~-~~~~~~~~~~~~~~~~~~ 467 (600)
.... -|..+... ..+. ...+..++..+. .+++
T Consensus 229 ~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~ 262 (404)
T 1i24_A 229 ETEM--------------------------------------------HEELRNRLDYDAVFGTALNRFCVQAA--VGHP 262 (404)
T ss_dssp TGGG--------------------------------------------SGGGCCCCCCSTTTCCHHHHHHHHHH--HTCC
T ss_pred cccc--------------------------------------------ccccccccccccchhhHHHHHHHHHH--cCCe
Confidence 1000 00000000 0000 001222333332 2555
Q ss_pred CceeeccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCC-ce--eEeEcCCCCCccHH
Q psy16545 468 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV-PY--IFYNLGTGQGTSVL 544 (600)
Q Consensus 468 ~~~~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~-~~--~~~nl~~~~~~s~~ 544 (600)
+++ + +++.+. ++|+| ++|+++++..++..+. .+ ++||+++ +++|+.
T Consensus 263 ~~~----~--g~g~~~----~~~i~--------------------v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~ 311 (404)
T 1i24_A 263 LTV----Y--GKGGQT----RGYLD--------------------IRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVN 311 (404)
T ss_dssp EEE----E--TTSCCE----EEEEE--------------------HHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHH
T ss_pred eEE----e--CCCCce----ECcEE--------------------HHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHH
Confidence 544 1 344444 88988 8899999988886543 34 7999998 899999
Q ss_pred HHHHHHhhh---cCCcccccccCCCCC--CccccccChHHHHHHcCceeeEEEEe
Q psy16545 545 QLLRTFERV---TGKPVPYIVEARREG--DIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 545 e~~~~~~~~---~g~~~~~~~~~~~~~--~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
|+++.+++. +|.+.++...|.+.. ......+|++|++ +|||+|+++++.
T Consensus 312 e~~~~i~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~-~LG~~p~~~~~~ 365 (404)
T 1i24_A 312 ELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLM-ELGLEPHYLSDS 365 (404)
T ss_dssp HHHHHHHHHHHTTTCCCCEEEECCSSCSCSSCCCCBCCCHHH-HTTCCCCCCCHH
T ss_pred HHHHHHHHHHHhhCCCccccccCcccCccccceEecCHHHHH-HcCCCcCcCHHH
Confidence 999999998 787766555554332 2345678999998 699999987653
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6.6e-25 Score=226.65 Aligned_cols=254 Identities=16% Similarity=0.222 Sum_probs=184.7
Q ss_pred CceeEEEeecCCh-hhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 252 KKVDFYSCDLVDK-NRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~~-~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
.+++++.+|+.+. ..+.++++ ++|+|||+|+.........++...++.|+.++.+++++|++.+ +||||+||.++|
T Consensus 45 ~~~~~~~~D~~~~~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~ 121 (345)
T 2bll_A 45 PHFHFVEGDISIHSEWIEYHVK--KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVY 121 (345)
T ss_dssp TTEEEEECCTTTCSHHHHHHHH--HCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGG
T ss_pred CCeEEEeccccCcHHHHHhhcc--CCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHc
Confidence 4689999999984 56777887 7899999999765444456788899999999999999999998 899999999999
Q ss_pred cCCCCCCCCCCCCCC------CCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHh
Q psy16545 331 GEPQFLPITEDHPTG------NIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVT 403 (600)
Q Consensus 331 g~~~~~~~~E~~~~~------~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~ 403 (600)
|.....+++|+++.. .+.+.|+.+| ..+|.+++.+.+.++++++++||+. +|++.....
T Consensus 122 g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK---~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~----------- 187 (345)
T 2bll_A 122 GMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK---QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLN----------- 187 (345)
T ss_dssp BTCCCSSBCTTTCCCBCCCTTCGGGHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTT-----------
T ss_pred CCCCCCCcCCcccccccCcccCcccccHHHH---HHHHHHHHHHHHhcCCCEEEEcCCcccCCCccccc-----------
Confidence 987767788887531 1235899999 7899999999988899999999987 555432100
Q ss_pred CCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccc
Q psy16545 404 GNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSV 483 (600)
Q Consensus 404 g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 483 (600)
.+. .+....+..++..+ ..+.++.+ + +++.+.
T Consensus 188 ------------~~~----------------------------~~~~~~~~~~~~~~--~~~~~~~~----~--~~g~~~ 219 (345)
T 2bll_A 188 ------------AAR----------------------------IGSSRAITQLILNL--VEGSPIKL----I--DGGKQK 219 (345)
T ss_dssp ------------CSB----------------------------SCBCHHHHHHHHHH--HHTCCEEE----G--GGSCCE
T ss_pred ------------ccc----------------------------cccccHHHHHHHHH--HcCCCcEE----E--CCCCEE
Confidence 000 00000011222222 22555443 1 333333
Q ss_pred hhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC---CceeEeEcCCCC-CccHHHHHHHHhhhcCCccc
Q psy16545 484 LQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP---VPYIFYNLGTGQ-GTSVLQLLRTFERVTGKPVP 559 (600)
Q Consensus 484 ~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~---~~~~~~nl~~~~-~~s~~e~~~~~~~~~g~~~~ 559 (600)
++|+| ++|+++++..++..+ ..+++||+++++ .+|+.|+++.+++.+|.+..
T Consensus 220 ----~~~i~--------------------v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~ 275 (345)
T 2bll_A 220 ----RCFTD--------------------IRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPL 275 (345)
T ss_dssp ----EECEE--------------------HHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTT
T ss_pred ----EEEEE--------------------HHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcc
Confidence 78888 889999998888654 357899999996 89999999999999987543
Q ss_pred ccccCCCC---------------CCccccccChHHHHHHcCceeeEEEEe
Q psy16545 560 YIVEARRE---------------GDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 560 ~~~~~~~~---------------~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
....+... .+.....+|++|++++|||+|+++++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 325 (345)
T 2bll_A 276 RHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQE 325 (345)
T ss_dssp GGGSCCCCCEEEC------------CCCCCBCCHHHHHHHCCCCCCCHHH
T ss_pred cccCccccccccccchhhccccccchhhhcccHHHHHHhcCCCccccHHH
Confidence 33222211 123456789999999999999998764
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.5e-25 Score=229.65 Aligned_cols=248 Identities=17% Similarity=0.187 Sum_probs=190.7
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCC-----EEEEecCc
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY-----QLVFSSSC 327 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~-----r~v~~SS~ 327 (600)
+++++.+|+.+.+.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++.+++ ||||+||.
T Consensus 84 ~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~ 163 (381)
T 1n7h_A 84 LMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSS 163 (381)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG
T ss_pred ceEEEECCCCCHHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcH
Confidence 6889999999999999998855689999999986655456788889999999999999999988765 99999999
Q ss_pred ccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHH-HHHHHHHHHhCC
Q psy16545 328 TVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVL-QLLRTFERVTGN 405 (600)
Q Consensus 328 ~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~-~~~~~~~~~~g~ 405 (600)
++||.... +++|+++..|. +.|+.+| ..+|.+++.+...++++++++|+++ +||+....+. ..+
T Consensus 164 ~vyg~~~~-~~~E~~~~~~~-~~Y~~sK---~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~--------- 229 (381)
T 1n7h_A 164 EMFGSTPP-PQSETTPFHPR-SPYAASK---CAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKI--------- 229 (381)
T ss_dssp GGGTTSCS-SBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHH---------
T ss_pred HHhCCCCC-CCCCCCCCCCC-CchHHHH---HHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHH---------
Confidence 99998766 89999988775 8999999 7899999999988899999999887 6554332210 000
Q ss_pred CCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchh
Q psy16545 406 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQ 485 (600)
Q Consensus 406 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 485 (600)
..++..+ ..+.+..+.+ +++.+.
T Consensus 230 ------------------------------------------------~~~~~~~--~~g~~~~~~~-----g~~~~~-- 252 (381)
T 1n7h_A 230 ------------------------------------------------TRALGRI--KVGLQTKLFL-----GNLQAS-- 252 (381)
T ss_dssp ------------------------------------------------HHHHHHH--HHTSCCCEEE-----SCTTCE--
T ss_pred ------------------------------------------------HHHHHHH--HcCCCCeEEe-----CCCCce--
Confidence 0011111 1233332221 333333
Q ss_pred hhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccc--cccc
Q psy16545 486 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP--YIVE 563 (600)
Q Consensus 486 ~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~--~~~~ 563 (600)
++|+| ++|+++++..++..+. +++||+++++.+|+.|+++.+.+.+|.+.. +...
T Consensus 253 --~~~v~--------------------v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~ 309 (381)
T 1n7h_A 253 --RDWGF--------------------AGDYVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEID 309 (381)
T ss_dssp --EECEE--------------------HHHHHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEEC
T ss_pred --eeeEE--------------------HHHHHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccC
Confidence 78888 9999999999887654 489999999999999999999999997532 1222
Q ss_pred --CCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 564 --ARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 564 --~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
..++.+.....+|++|++++|||+|+++++.
T Consensus 310 ~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e 342 (381)
T 1n7h_A 310 QRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEK 342 (381)
T ss_dssp GGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHH
T ss_pred cccCCccccccccCCHHHHHHhcCCcccCCHHH
Confidence 2234555667889999999999999988864
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.9e-25 Score=227.01 Aligned_cols=212 Identities=33% Similarity=0.436 Sum_probs=171.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIH 72 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih 72 (600)
.|||++|++|+++.+.... .+.++++++|. .+|+.+.+++.+ +++..++|+|||
T Consensus 5 lVtGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~---------~~~~~~~d~vih 73 (330)
T 2c20_A 5 LICGGAGYIGSHAVKKLVD--EGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRD---------VFTQENIEAVMH 73 (330)
T ss_dssp EEETTTSHHHHHHHHHHHH--TTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHH---------HHHHSCEEEEEE
T ss_pred EEECCCcHHHHHHHHHHHh--CCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHH---------HHhhcCCCEEEE
Confidence 3899999999999653321 22233333221 679999988888 554447999999
Q ss_pred cCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q psy16545 73 FAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEM 152 (600)
Q Consensus 73 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~ 152 (600)
+||.........++...+++|+.++.+|+++|++.++++||++||.++||.....+++|+++. .|.++|+.||.++|++
T Consensus 74 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~-~~~~~Y~~sK~~~e~~ 152 (330)
T 2c20_A 74 FAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMT-NPTNTYGETKLAIEKM 152 (330)
T ss_dssp CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCC-CCSSHHHHHHHHHHHH
T ss_pred CCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCC-CCCChHHHHHHHHHHH
Confidence 999875433445778899999999999999999999999999999999998777789999999 8999999999999999
Q ss_pred HHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEec------CCcccccCcceEEe
Q psy16545 153 LKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG------ADYETEDGTGKVVA 226 (600)
Q Consensus 153 ~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g------~g~~~~~~~~v~d~ 226 (600)
++.++.++ +++++++||+++|||+..+.+|+... ....+++.+.+.+.+..+++.++| +|.+.++++|++|+
T Consensus 153 ~~~~~~~~-~~~~~ilrp~~v~G~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dv 230 (330)
T 2c20_A 153 LHWYSQAS-NLRYKIFRYFNVAGATPNGIIGEDHR-PETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDL 230 (330)
T ss_dssp HHHHHHTS-SCEEEEEECSEEECCCTTCSSCCCCS-SCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHH
T ss_pred HHHHHHHh-CCcEEEEecCcccCCCCcCccccccc-cccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHH
Confidence 99998876 99999999999999987777765532 235678888887766667788888 78899999999998
Q ss_pred eeccccc
Q psy16545 227 IDNFVNS 233 (600)
Q Consensus 227 v~~~~~a 233 (600)
++.+..+
T Consensus 231 a~a~~~~ 237 (330)
T 2c20_A 231 VAAHFLG 237 (330)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8866544
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.8e-25 Score=228.95 Aligned_cols=248 Identities=18% Similarity=0.215 Sum_probs=187.6
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccc-cccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGE-SMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~-~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
.+++++.+|+.+.+.+.++++ ++|+|||+|+...... ...++...++.|+.++.+++++|++.+++||||+||.++|
T Consensus 72 ~~v~~~~~Dl~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~ 149 (379)
T 2c5a_A 72 FCDEFHLVDLRVMENCLKVTE--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIY 149 (379)
T ss_dssp TCSEEEECCTTSHHHHHHHHT--TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGS
T ss_pred CCceEEECCCCCHHHHHHHhC--CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehhee
Confidence 367899999999999999997 8999999999754322 1467888999999999999999999999999999999999
Q ss_pred cCCCC-----CCCCCCC--CCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHH
Q psy16545 331 GEPQF-----LPITEDH--PTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERV 402 (600)
Q Consensus 331 g~~~~-----~~~~E~~--~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~ 402 (600)
|.... .+++|++ +..|. +.|+.+| ..+|.+++.+.+.++++++++||+. +|++.....
T Consensus 150 ~~~~~~~~~~~~~~E~~~~~~~~~-~~Y~~sK---~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~---------- 215 (379)
T 2c5a_A 150 PEFKQLETTNVSLKESDAWPAEPQ-DAFGLEK---LATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKG---------- 215 (379)
T ss_dssp CGGGSSSSSSCEECGGGGSSBCCS-SHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSS----------
T ss_pred CCCCCCCccCCCcCcccCCCCCCC-ChhHHHH---HHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCccc----------
Confidence 86432 3577876 44443 7999999 7899999999888899999999987 544322100
Q ss_pred hCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCC-CceeeccCCCCCcc
Q psy16545 403 TGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP-VPYIFYNLGTGQGT 481 (600)
Q Consensus 403 ~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~ 481 (600)
+....+..++..+. .+.+ +++ + +++.
T Consensus 216 ---------------------------------------------~~~~~~~~~~~~~~--~~~~~~~~----~--g~g~ 242 (379)
T 2c5a_A 216 ---------------------------------------------GREKAPAAFCRKAQ--TSTDRFEM----W--GDGL 242 (379)
T ss_dssp ---------------------------------------------SCCCHHHHHHHHHH--HCSSCEEE----E--SCSC
T ss_pred ---------------------------------------------ccccHHHHHHHHHH--hCCCceEE----e--CCCC
Confidence 00000112222221 2443 332 1 3344
Q ss_pred cchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccccc
Q psy16545 482 SVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYI 561 (600)
Q Consensus 482 ~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~ 561 (600)
+. ++|+| ++|+++++..++..+ .+++||+++++.+|+.|+++.+.+.+|.+.++.
T Consensus 243 ~~----~~~i~--------------------v~Dva~ai~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~ 297 (379)
T 2c5a_A 243 QT----RSFTF--------------------IDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIH 297 (379)
T ss_dssp CE----ECCEE--------------------HHHHHHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEE
T ss_pred ee----EEEEE--------------------HHHHHHHHHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCCCCcee
Confidence 33 78888 889999999888765 568999999999999999999999999876666
Q ss_pred ccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 562 VEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 562 ~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
..|.+. ......+|++|++++|||+|+++++.
T Consensus 298 ~~p~~~-~~~~~~~d~~k~~~~lG~~p~~~l~e 329 (379)
T 2c5a_A 298 HIPGPE-GVRGRNSDNNLIKEKLGWAPNMRLKE 329 (379)
T ss_dssp EECCCC-CCSBCEECCHHHHHHHSCCCCCCHHH
T ss_pred eCCCCC-CcccccCCHHHHHHHhCCCCCCCHHH
Confidence 555432 34556789999999999999988764
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.1e-25 Score=228.94 Aligned_cols=204 Identities=22% Similarity=0.242 Sum_probs=167.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------------cccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------------EGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------------~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
.|||++|++|+++.+... ..+.++++++|. .+|+.|.+++.+ +
T Consensus 29 lVtGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~ 97 (351)
T 3ruf_A 29 LITGVAGFIGSNLLEKLL--KLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQ---------V 97 (351)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHH---------H
T ss_pred EEECCCcHHHHHHHHHHH--HCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHH---------H
Confidence 589999999999965332 222333333331 689999998888 7
Q ss_pred cccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 62 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
++ ++|+||||||.........++...+++|+.++.+|+++|++.++++||++||.++||.....+++|+++. .|.++
T Consensus 98 ~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~-~p~~~ 174 (351)
T 3ruf_A 98 MK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIG-NPLSP 174 (351)
T ss_dssp TT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCC-CCCSH
T ss_pred hc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCC-CCCCh
Confidence 76 8999999999876555567788899999999999999999999999999999999998887899999999 89999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCc
Q psy16545 142 YGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGT 221 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~ 221 (600)
|+.+|+++|++++.++++. +++++++||++||||+..+. +....+++.+...+. .++++.++|+|.+.++++
T Consensus 175 Y~~sK~~~E~~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~g~g~~~~~~i 246 (351)
T 3ruf_A 175 YAVTKYVNEIYAQVYARTY-GFKTIGLRYFNVFGRRQDPN------GAYAAVIPKWTAAML-KGDDVYINGDGETSRDFC 246 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHH-CCCCEEEEECSEESTTCCCC------STTCCHHHHHHHHHH-HTCCCEEESSSCCEECCE
T ss_pred hHHHHHHHHHHHHHHHHHh-CCCEEEEeeCceeCcCCCCC------cchhhHHHHHHHHHH-cCCCcEEeCCCCeEEeeE
Confidence 9999999999999998887 99999999999999975421 112357776666655 446788899999999999
Q ss_pred ceEEeeeccccc
Q psy16545 222 GKVVAIDNFVNS 233 (600)
Q Consensus 222 ~v~d~v~~~~~a 233 (600)
|++|+++.+..+
T Consensus 247 ~v~Dva~a~~~~ 258 (351)
T 3ruf_A 247 YIDNVIQMNILS 258 (351)
T ss_dssp EHHHHHHHHHHH
T ss_pred EHHHHHHHHHHH
Confidence 999998876654
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.92 E-value=5e-25 Score=227.82 Aligned_cols=204 Identities=20% Similarity=0.237 Sum_probs=160.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTHD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~ 66 (600)
.|||++|++|+++.+.....+..++++++++. .+|+.|.+.+.+ +++..+
T Consensus 28 lVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~~~~ 98 (346)
T 4egb_A 28 LVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEH---------VIKERD 98 (346)
T ss_dssp EEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHH---------HHHHHT
T ss_pred EEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHH---------HHhhcC
Confidence 58999999999996533222212333333221 789999999988 665346
Q ss_pred CCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCC-CCCCCCCCCCCCCCCChHHHH
Q psy16545 67 IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP-QFLPITEDHPTGNIKNVYGKT 145 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~-~~~~~~E~~~~~~p~s~Y~~s 145 (600)
+|+|||+||.........++...+++|+.++.+|+++|++.++++||++||.++||.. ...+++|+++. .|.++|+.|
T Consensus 99 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~-~p~~~Y~~s 177 (346)
T 4egb_A 99 VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPL-APNSPYSSS 177 (346)
T ss_dssp CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCC-CCCSHHHHH
T ss_pred CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCC-CCCChhHHH
Confidence 9999999999876656677888999999999999999999999999999999999976 45689999999 899999999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEE
Q psy16545 146 KHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVV 225 (600)
Q Consensus 146 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d 225 (600)
|+++|++++.++++. +++++++||+++|||.... ..+++.+...+. .+++++++|+|.+.++++|++|
T Consensus 178 K~~~E~~~~~~~~~~-g~~~~ilRp~~v~G~~~~~----------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D 245 (346)
T 4egb_A 178 KASADMIALAYYKTY-QLPVIVTRCSNNYGPYQYP----------EKLIPLMVTNAL-EGKKLPLYGDGLNVRDWLHVTD 245 (346)
T ss_dssp HHHHHHHHHHHHHHH-CCCEEEEEECEEESTTCCT----------TSHHHHHHHHHH-TTCCCEEETTSCCEECEEEHHH
T ss_pred HHHHHHHHHHHHHHh-CCCEEEEeecceeCcCCCc----------cchHHHHHHHHH-cCCCceeeCCCCeEEeeEEHHH
Confidence 999999999999887 9999999999999996431 346777776666 5567888999999999999999
Q ss_pred eeeccccc
Q psy16545 226 AIDNFVNS 233 (600)
Q Consensus 226 ~v~~~~~a 233 (600)
+++.+..+
T Consensus 246 va~a~~~~ 253 (346)
T 4egb_A 246 HCSAIDVV 253 (346)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88866644
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=222.83 Aligned_cols=241 Identities=21% Similarity=0.379 Sum_probs=185.2
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.+.. +. ++|+|||+|+.........++...++.|+.++.+++++|++.++ ||||+||.++||
T Consensus 75 ~~~~~~~~D~~~~~-----~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g 146 (343)
T 2b69_A 75 ENFELINHDVVEPL-----YI--EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYG 146 (343)
T ss_dssp TTEEEEECCTTSCC-----CC--CCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGB
T ss_pred CceEEEeCccCChh-----hc--CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhC
Confidence 46889999998763 33 78999999998655445567888999999999999999999886 999999999999
Q ss_pred CCCCCCCCCCC-----CCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCC
Q psy16545 332 EPQFLPITEDH-----PTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGN 405 (600)
Q Consensus 332 ~~~~~~~~E~~-----~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~ 405 (600)
.....+++|+. +..| .+.|+.+| ..+|.+++.+.+..+++++++||++ +|++.....
T Consensus 147 ~~~~~~~~E~~~~~~~~~~~-~~~Y~~sK---~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~------------- 209 (343)
T 2b69_A 147 DPEVHPQSEDYWGHVNPIGP-RACYDEGK---RVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMND------------- 209 (343)
T ss_dssp SCSSSSBCTTCCCBCCSSST-THHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTC-------------
T ss_pred CCCCCCCcccccccCCCCCC-CCchHHHH---HHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCc-------------
Confidence 87777888884 4444 37899999 8899999999988899999999887 554321100
Q ss_pred CCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchh
Q psy16545 406 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQ 485 (600)
Q Consensus 406 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 485 (600)
...+..++..+ ..+.++.+. +++.+.
T Consensus 210 --------------------------------------------~~~~~~~~~~~--~~~~~~~~~------~~~~~~-- 235 (343)
T 2b69_A 210 --------------------------------------------GRVVSNFILQA--LQGEPLTVY------GSGSQT-- 235 (343)
T ss_dssp --------------------------------------------CCHHHHHHHHH--HHTCCEEEE------SSSCCE--
T ss_pred --------------------------------------------ccHHHHHHHHH--HcCCCceEc------CCCCeE--
Confidence 00011122222 125554431 334433
Q ss_pred hhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCC
Q psy16545 486 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEAR 565 (600)
Q Consensus 486 ~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 565 (600)
++|+| ++|+++++..++..+ .+++||+++++.+|+.|+++.+.+.+|.+.++...+.
T Consensus 236 --~~~v~--------------------v~Dva~a~~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~ 292 (343)
T 2b69_A 236 --RAFQY--------------------VSDLVNGLVALMNSN-VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSE 292 (343)
T ss_dssp --EECEE--------------------HHHHHHHHHHHHTSS-CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECC
T ss_pred --EeeEe--------------------HHHHHHHHHHHHhcC-CCCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCC
Confidence 78888 889999998888764 3679999999999999999999999998877766666
Q ss_pred CCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 566 REGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 566 ~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
...++....+|++|++++|||+|+++++.
T Consensus 293 ~~~~~~~~~~d~~k~~~~lG~~p~~~l~e 321 (343)
T 2b69_A 293 AQDDPQKRKPDIKKAKLMLGWEPVVPLEE 321 (343)
T ss_dssp CTTCCCCCCBCCHHHHHHHCCCCCSCHHH
T ss_pred CCCCCceecCCHHHHHHHcCCCCCCCHHH
Confidence 55566677889999999999999988764
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8e-25 Score=225.50 Aligned_cols=213 Identities=41% Similarity=0.638 Sum_probs=169.7
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccc----------------------ccccccChHHhhhHHhhhhcccccccCC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEAR----------------------REGDIVSMYANTDLAQKELGWSARCTHD 66 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~----------------------~~~Dl~~~~~~~~~~~~~~~~~~~~~~~ 66 (600)
|||++|++|+++.+... ..+.+++++++ -.+|+++.+++.+ +++..+
T Consensus 5 VTGatG~iG~~l~~~L~--~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---------~~~~~~ 73 (338)
T 1udb_A 5 VTGGSGYIGSHTCVQLL--QNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTE---------ILHDHA 73 (338)
T ss_dssp EETTTSHHHHHHHHHHH--HTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHH---------HHHHTT
T ss_pred EECCCCHHHHHHHHHHH--HCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHH---------HhhccC
Confidence 79999999999965322 22222322221 1579999888888 554346
Q ss_pred CCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCC-CChHHHH
Q psy16545 67 IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNI-KNVYGKT 145 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p-~s~Y~~s 145 (600)
+|+||||||.........++...+++|+.++.+++++|++.++++||++||.++||.....+++|+.+. .| .++|+.|
T Consensus 74 ~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~-~~~~~~Y~~s 152 (338)
T 1udb_A 74 IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPT-GTPQSPYGKS 152 (338)
T ss_dssp CSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCC-CCCSSHHHHH
T ss_pred CCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCC-CCCCChHHHH
Confidence 999999999765433345667789999999999999999989899999999999997766788998887 55 8999999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEec------CCccccc
Q psy16545 146 KHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG------ADYETED 219 (600)
Q Consensus 146 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g------~g~~~~~ 219 (600)
|+++|++++.++.++++++++++||+++|||++.+.+|+...+....+++.+.+.+.+..+++.++| +|.+.|+
T Consensus 153 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 232 (338)
T 1udb_A 153 KLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232 (338)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred HHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeee
Confidence 9999999999987755899999999999999887778776655456788888887776667788876 6788999
Q ss_pred CcceEEeeeccccc
Q psy16545 220 GTGKVVAIDNFVNS 233 (600)
Q Consensus 220 ~~~v~d~v~~~~~a 233 (600)
++|++|+++.+..+
T Consensus 233 ~i~v~Dva~a~~~~ 246 (338)
T 1udb_A 233 YIHVMDLADGHVVA 246 (338)
T ss_dssp EEEHHHHHHHHHHH
T ss_pred eEEHHHHHHHHHHH
Confidence 99999988866544
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=220.34 Aligned_cols=197 Identities=22% Similarity=0.304 Sum_probs=160.1
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEEEc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHF 73 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~ 73 (600)
|||++|++|+++.+.. ...+ ..+.++++ .+|+.+ +++.+ +++ ++|+|||+
T Consensus 6 VTGatG~iG~~l~~~L--~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~---------~~~--~~d~vih~ 70 (313)
T 3ehe_A 6 VTGGAGFIGSHVVDKL--SESN-EIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKD---------YLK--GAEEVWHI 70 (313)
T ss_dssp EETTTSHHHHHHHHHH--TTTS-CEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHH---------HHT--TCSEEEEC
T ss_pred EECCCchHHHHHHHHH--HhCC-CEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHH---------Hhc--CCCEEEEC
Confidence 8999999999996533 2223 22222211 578888 77777 665 89999999
Q ss_pred CcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q psy16545 74 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEML 153 (600)
Q Consensus 74 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~ 153 (600)
|+.........++...+++|+.++.+|+++|++.++++||++||.++||.....+++|+.+. .|.++|+.||.++|.++
T Consensus 71 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~-~~~~~Y~~sK~~~e~~~ 149 (313)
T 3ehe_A 71 AANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPT-HPISLYGASKLACEALI 149 (313)
T ss_dssp CCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCC-CCCSHHHHHHHHHHHHH
T ss_pred CCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCC-CCCCHHHHHHHHHHHHH
Confidence 99876556678889999999999999999999999999999999999998887899999999 89999999999999999
Q ss_pred HHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 154 KDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 154 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
+.++.++ +++++++||++||||... ..+++.+...+.....++.++|+|.+.++++|++|+++.+..+
T Consensus 150 ~~~~~~~-g~~~~ilRp~~v~G~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~ 217 (313)
T 3ehe_A 150 ESYCHTF-DMQAWIYRFANVIGRRST-----------HGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFG 217 (313)
T ss_dssp HHHHHHT-TCEEEEEECSCEESTTCC-----------CSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHH
T ss_pred HHHHHhc-CCCEEEEeeccccCcCCC-----------cChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHH
Confidence 9999887 999999999999999643 1245444443332446788899999999999999999876655
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.7e-25 Score=226.12 Aligned_cols=214 Identities=47% Similarity=0.664 Sum_probs=171.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccc----------------------------ccccccChHHhhhHHhhhhcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEAR----------------------------REGDIVSMYANTDLAQKELGW 59 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~----------------------------~~~Dl~~~~~~~~~~~~~~~~ 59 (600)
.|||++|++|+++.+.... .+.++++++| -.+|++|.+++.+
T Consensus 6 lVtGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~-------- 75 (348)
T 1ek6_A 6 LVTGGAGYIGSHTVLELLE--AGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQR-------- 75 (348)
T ss_dssp EEETTTSHHHHHHHHHHHH--TTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHH--------
T ss_pred EEECCCCHHHHHHHHHHHH--CCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHH--------
Confidence 4899999999999653221 2223333222 0578999888888
Q ss_pred cccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCC-
Q psy16545 60 SARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNI- 138 (600)
Q Consensus 60 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p- 138 (600)
+++..++|+||||||.........++...+++|+.++.+++++|++.++++||++||.++||.....+++|+++. .|
T Consensus 76 -~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~-~p~ 153 (348)
T 1ek6_A 76 -LFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPT-GGC 153 (348)
T ss_dssp -HHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCC-CCC
T ss_pred -HHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCC-CCC
Confidence 554347999999999875433445677899999999999999999999999999999999998777789999988 67
Q ss_pred CChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEec------
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG------ 212 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g------ 212 (600)
.++|+.||+++|++++.++.+.++++++++||+++|||++.+.+|+...+....+++.+.+.+.+.++++.++|
T Consensus 154 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 233 (348)
T 1ek6_A 154 TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTE 233 (348)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred CCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCC
Confidence 89999999999999999887623599999999999999887777776554446688888888776677888888
Q ss_pred CCcccccCcceEEeeeccccc
Q psy16545 213 ADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 213 ~g~~~~~~~~v~d~v~~~~~a 233 (600)
+|.+.++++|++|+++.+..+
T Consensus 234 ~g~~~~~~i~v~Dva~a~~~~ 254 (348)
T 1ek6_A 234 DGTGVRDYIHVVDLAKGHIAA 254 (348)
T ss_dssp SSSCEECEEEHHHHHHHHHHH
T ss_pred CCceEEeeEEHHHHHHHHHHH
Confidence 788999999999998866544
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=221.52 Aligned_cols=195 Identities=18% Similarity=0.203 Sum_probs=163.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------cccccChHHhhhHHhhhhcccccccCCCCEEEEcCc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAA 75 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~ 75 (600)
.|||++|++|+++.+. +...+.++++++|. .+|+. .+++.+ +++ ++|+|||||+
T Consensus 6 lVtGatG~iG~~l~~~--L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~---------~~~--~~d~Vih~a~ 71 (311)
T 3m2p_A 6 AVTGGTGFLGQYVVES--IKNDGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLIN---------QLN--DVDAVVHLAA 71 (311)
T ss_dssp EEETTTSHHHHHHHHH--HHHTTCEEEEEESCCC-----CCEEEECCCC-HHHHHH---------HTT--TCSEEEECCC
T ss_pred EEECCCcHHHHHHHHH--HHhCCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHH---------hhc--CCCEEEEccc
Confidence 4899999999999653 33334455555554 68999 888888 776 8999999999
Q ss_pred ccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Q psy16545 76 VKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKD 155 (600)
Q Consensus 76 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~ 155 (600)
..... ++...+++|+.++.+++++|++.+++|||++||.++||.....+++|+++. .|.++|+.+|+++|++++.
T Consensus 72 ~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~-~p~~~Y~~sK~~~E~~~~~ 146 (311)
T 3m2p_A 72 TRGSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELP-LPDLMYGVSKLACEHIGNI 146 (311)
T ss_dssp CCCSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCC-CCSSHHHHHHHHHHHHHHH
T ss_pred cCCCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCC-CCCchhHHHHHHHHHHHHH
Confidence 87543 667799999999999999999999999999999999998877899999999 8999999999999999999
Q ss_pred HHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 156 LSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 156 ~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
++.+. +++++++||+++|||...+ ..+++.+.+.+. .++++.++|+|.+.++++|++|+++.+..+
T Consensus 147 ~~~~~-g~~~~ilRp~~v~G~~~~~----------~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~ 212 (311)
T 3m2p_A 147 YSRKK-GLCIKNLRFAHLYGFNEKN----------NYMINRFFRQAF-HGEQLTLHANSVAKREFLYAKDAAKSVIYA 212 (311)
T ss_dssp HHHHS-CCEEEEEEECEEECSCC------------CCHHHHHHHHHH-TCCCEEESSBCCCCEEEEEHHHHHHHHHHH
T ss_pred HHHHc-CCCEEEEeeCceeCcCCCC----------CCHHHHHHHHHH-cCCCeEEecCCCeEEceEEHHHHHHHHHHH
Confidence 98876 9999999999999997432 246777776665 557888889999999999999998866654
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.7e-25 Score=222.15 Aligned_cols=249 Identities=12% Similarity=0.172 Sum_probs=181.9
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 332 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~ 332 (600)
+++++.+|+.+.+.+.++++..++|+|||+|+.... ....++...++.|+.++.+++++|++.+++||||+||.++||.
T Consensus 46 ~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~ 124 (312)
T 2yy7_A 46 SGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLSA-TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGP 124 (312)
T ss_dssp SSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCT
T ss_pred CCceEEecCCCHHHHHHHHhhcCCCEEEECCccCCC-chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCC
Confidence 467899999999999999987789999999997543 2346788899999999999999999999999999999999997
Q ss_pred CC-CCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcce
Q psy16545 333 PQ-FLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPY 410 (600)
Q Consensus 333 ~~-~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~ 410 (600)
.. ..+.+|+.+..|. ++|+.+| ..+|.+++.+...++++++++||++ +|++..
T Consensus 125 ~~~~~~~~e~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~--------------------- 179 (312)
T 2yy7_A 125 TTPKENTPQYTIMEPS-TVYGISK---QAGERWCEYYHNIYGVDVRSIRYPGLISWSTP--------------------- 179 (312)
T ss_dssp TSCSSSBCSSCBCCCC-SHHHHHH---HHHHHHHHHHHHHHCCEEECEEECEEECSSSC---------------------
T ss_pred CCCCCCccccCcCCCC-chhHHHH---HHHHHHHHHHHHhcCCcEEEEeCCeEecCCCC---------------------
Confidence 54 3567888887765 8999999 7899999999888899999999887 543211
Q ss_pred EEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhh
Q psy16545 411 IFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF 490 (600)
Q Consensus 411 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f 490 (600)
|+... .......+.. .+.+.++++ ++.+++. ++|
T Consensus 180 ------~~~~~---------------------------~~~~~~~~~~---~~~~~~~~~----~~~~~~~------~~~ 213 (312)
T 2yy7_A 180 ------PGGGT---------------------------TDYAVDIFYK---AIADKKYEC----FLSSETK------MPM 213 (312)
T ss_dssp ------CCSCT---------------------------TTHHHHHHHH---HHHTSEEEE----SSCTTCC------EEE
T ss_pred ------CCCch---------------------------hhhHHHHHHH---HHcCCCeEE----ecCCCce------eee
Confidence 11000 0000011111 112333322 1223333 888
Q ss_pred hhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCc----eeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCC
Q psy16545 491 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP----YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARR 566 (600)
Q Consensus 491 i~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~----~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~ 566 (600)
+| ++|+++++..++..+.. +++||+++ +.+|++|+++.+.+.+|. .++.+.+..
T Consensus 214 i~--------------------v~Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~ 271 (312)
T 2yy7_A 214 MY--------------------MDDAIDATINIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPE-FTITYEPDF 271 (312)
T ss_dssp EE--------------------HHHHHHHHHHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTT-CEEEECCCT
T ss_pred ee--------------------HHHHHHHHHHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCCC-CceEeccCc
Confidence 88 88999999888876532 48999996 899999999999999983 233333321
Q ss_pred CC---CccccccChHHHHHHcCceeeEEEEec
Q psy16545 567 EG---DIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 567 ~~---~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
.. ......+|++|++++|||+|+++++.+
T Consensus 272 ~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 303 (312)
T 2yy7_A 272 RQKIADSWPASIDDSQAREDWDWKHTFDLESM 303 (312)
T ss_dssp HHHHHTTSCSSBCCHHHHHHHCCCCCCCHHHH
T ss_pred cccccccccccCCHHHHHHHcCCCCCCCHHHH
Confidence 11 112346899999999999999988653
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-24 Score=219.41 Aligned_cols=208 Identities=17% Similarity=0.177 Sum_probs=164.4
Q ss_pred cCCCCcchHHHHHHHhhhccC--CCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccC-cccCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG--KPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKA-VGESMQ 84 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~-~~~~~~ 84 (600)
.|||++|++|+++.+.....+ .......+....+|++|.+.+.+ +++..++|+||||||... ......
T Consensus 10 lVtGatG~iG~~l~~~L~~~g~~~~~~~~~~~~~~~D~~d~~~~~~---------~~~~~~~d~Vih~A~~~~~~~~~~~ 80 (319)
T 4b8w_A 10 LVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRA---------LFEKVQPTHVIHLAAMVGGLFRNIK 80 (319)
T ss_dssp EEETCSSHHHHHHHHHHHTTTCCTTCEEEECCTTTCCTTSHHHHHH---------HHHHSCCSEEEECCCCCCCHHHHTT
T ss_pred EEECCCcHHHHHHHHHHHhcCCcccccccccCceecccCCHHHHHH---------HHhhcCCCEEEECceeccccccccc
Confidence 589999999999966433221 11223333334899999999988 666456999999999864 223457
Q ss_pred ChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCC----CCCCCCC-hHHHHHHHHHHHHHHHHhh
Q psy16545 85 EPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDH----PTGNIKN-VYGKTKHFIEEMLKDLSKA 159 (600)
Q Consensus 85 ~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~----~~~~p~s-~Y~~sK~~~e~~~~~~~~~ 159 (600)
++...+++|+.++.+|+++|++.++++||++||.++||.....+++|++ +. .|.+ +|+.||+++|++++.++++
T Consensus 81 ~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~-~p~~~~Y~~sK~~~E~~~~~~~~~ 159 (319)
T 4b8w_A 81 YNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPP-HNSNFGYSYAKRMIDVQNRAYFQQ 159 (319)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCC-CSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCC-CCCcchHHHHHHHHHHHHHHHHHh
Confidence 7888999999999999999999999999999999999988878999997 66 5666 6999999999999999888
Q ss_pred cCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHh----hcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 160 HKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQV----AIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 160 ~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
. +++++++||+++|||+..+.. ....+++.+... +. .++++.++|+|.+.|+++|++|+++.+..+
T Consensus 160 ~-~~~~~ilRp~~v~Gp~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~ 229 (319)
T 4b8w_A 160 Y-GCTFTAVIPTNVFGPHDNFNI------EDGHVLPGLIHKVHLAKS-SGSALTVWGTGNPRRQFIYSLDLAQLFIWV 229 (319)
T ss_dssp H-CCEEEEEEECEEECTTCCCCT------TTSCHHHHHHHHHHHHHH-HTCCEEEESCSCCEECEEEHHHHHHHHHHH
T ss_pred h-CCCEEEEeeccccCCCCCCCC------ccccccHHHHHHHHHHhc-cCCceEEeCCCCeeEEEEeHHHHHHHHHHH
Confidence 7 999999999999999754321 123455555444 44 456888999999999999999998876654
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-24 Score=220.75 Aligned_cols=197 Identities=24% Similarity=0.279 Sum_probs=157.2
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEEEc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHF 73 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~ 73 (600)
|||++|++|+++.+.. ...+.++++++|. .+|+.|.+ +.+ +++ + |+||||
T Consensus 5 VtGatG~iG~~l~~~L--~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~---------~~~--~-d~vih~ 69 (312)
T 3ko8_A 5 VTGGAGFIGSHLVDKL--VELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGA---------GIK--G-DVVFHF 69 (312)
T ss_dssp EETTTSHHHHHHHHHH--HHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTT---------TCC--C-SEEEEC
T ss_pred EECCCChHHHHHHHHH--HhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHh---------hcC--C-CEEEEC
Confidence 7999999999996533 2233344444432 67888887 766 666 4 999999
Q ss_pred CcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q psy16545 74 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEML 153 (600)
Q Consensus 74 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~ 153 (600)
||.........++...+++|+.++.+++++|++.++++||++||.++||.....+++|+.+. .|.++|+.||.++|+++
T Consensus 70 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~-~p~~~Y~~sK~~~e~~~ 148 (312)
T 3ko8_A 70 AANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPY-KPISVYGAAKAAGEVMC 148 (312)
T ss_dssp CSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCC-CCCSHHHHHHHHHHHHH
T ss_pred CCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCC-CCCChHHHHHHHHHHHH
Confidence 99876666677888999999999999999999999999999999999998877899999999 89999999999999999
Q ss_pred HHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 154 KDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 154 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
+.++.++ +++++++||+++|||+.. ..+++.+...+.....++.++++|.+.++++|++|+++.+..+
T Consensus 149 ~~~~~~~-g~~~~~lrp~~v~g~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~ 216 (312)
T 3ko8_A 149 ATYARLF-GVRCLAVRYANVVGPRLR-----------HGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAA 216 (312)
T ss_dssp HHHHHHH-CCEEEEEEECEEECTTCC-----------SSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHH
T ss_pred HHHHHHh-CCCEEEEeeccccCcCCC-----------CChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHH
Confidence 9999887 999999999999999643 2244444443433446788899999999999999998876644
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-25 Score=223.67 Aligned_cols=223 Identities=16% Similarity=0.084 Sum_probs=173.1
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.+.+.+.++++. ++|+|||+|+.. ..++...++.|+.++.+++++|++.+++||||+||.++||
T Consensus 41 ~~~~~~~~Dl~d~~~~~~~~~~-~~d~vih~a~~~-----~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg 114 (286)
T 3gpi_A 41 AGVQTLIADVTRPDTLASIVHL-RPEILVYCVAAS-----EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYG 114 (286)
T ss_dssp TTCCEEECCTTCGGGCTTGGGG-CCSEEEECHHHH-----HHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCC
T ss_pred cCCceEEccCCChHHHHHhhcC-CCCEEEEeCCCC-----CCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEc
Confidence 5688999999999999888872 499999999863 2466778899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcce
Q psy16545 332 EPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPY 410 (600)
Q Consensus 332 ~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~ 410 (600)
.....+++|+++..|. ++|+.+| ..+|.+ +.+ ++++++||++ +|++....
T Consensus 115 ~~~~~~~~E~~~~~p~-~~Y~~sK---~~~E~~-~~~-----~~~~ilR~~~v~G~~~~~~------------------- 165 (286)
T 3gpi_A 115 QEVEEWLDEDTPPIAK-DFSGKRM---LEAEAL-LAA-----YSSTILRFSGIYGPGRLRM------------------- 165 (286)
T ss_dssp CCCSSEECTTSCCCCC-SHHHHHH---HHHHHH-GGG-----SSEEEEEECEEEBTTBCHH-------------------
T ss_pred CCCCCCCCCCCCCCCC-ChhhHHH---HHHHHH-Hhc-----CCeEEEecccccCCCchhH-------------------
Confidence 9888889999998876 8999999 778887 543 8999999887 54433210
Q ss_pred EEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhh
Q psy16545 411 IFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF 490 (600)
Q Consensus 411 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f 490 (600)
+..+ .. . .. . +.+.+. ++|
T Consensus 166 ----------------------------------------------~~~~---~~-~-~~----~--~~~~~~----~~~ 184 (286)
T 3gpi_A 166 ----------------------------------------------IRQA---QT-P-EQ----W--PARNAW----TNR 184 (286)
T ss_dssp ----------------------------------------------HHHT---TC-G-GG----S--CSSBCE----ECE
T ss_pred ----------------------------------------------HHHH---Hh-c-cc----C--CCcCce----eEE
Confidence 0000 01 0 00 1 233333 788
Q ss_pred hhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCC---CCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCCC
Q psy16545 491 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK---PVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE 567 (600)
Q Consensus 491 i~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~---~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~ 567 (600)
+| ++|+++++..++.. ...+++||+++++.+|+.|+++.+++.+|.+.++...+
T Consensus 185 i~--------------------v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~--- 241 (286)
T 3gpi_A 185 IH--------------------RDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATP--- 241 (286)
T ss_dssp EE--------------------HHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCCC---
T ss_pred EE--------------------HHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCCc---
Confidence 88 88999999888876 45689999999999999999999999999877666544
Q ss_pred CCccccccChHHHHHHcCceeeE-EEEe
Q psy16545 568 GDIVSMYANTDLAQRELGWSARC-TVKI 594 (600)
Q Consensus 568 ~~~~~~~~d~~k~~~~lG~~p~~-~l~~ 594 (600)
.......+|++|++ .|||+|++ +++.
T Consensus 242 ~~~~~~~~d~~k~~-~lG~~p~~~~l~e 268 (286)
T 3gpi_A 242 PVQGNKKLSNARLL-ASGYQLIYPDYVS 268 (286)
T ss_dssp CBCSSCEECCHHHH-HTTCCCSSCSHHH
T ss_pred ccCCCeEeeHHHHH-HcCCCCcCCcHHH
Confidence 44567789999998 79999998 5764
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=7.9e-24 Score=239.24 Aligned_cols=267 Identities=33% Similarity=0.555 Sum_probs=190.7
Q ss_pred HHhhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Q psy16545 246 IEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSS 325 (600)
Q Consensus 246 ~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~S 325 (600)
+..+.+.+++++.+|+.+.+.+.++++..++|+|||+|+.........++...++.|+.++.+++++|++.+++||||+|
T Consensus 55 l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~S 134 (699)
T 1z45_A 55 LEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSS 134 (699)
T ss_dssp HHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 33344567899999999999999998866799999999986544445677789999999999999999999999999999
Q ss_pred CcccccCCC----CCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH--hCCCCeeEeecc-cCCCCcchHHHHHHH
Q psy16545 326 SCTVYGEPQ----FLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV--TGNKPVPYIFYN-LGTGQGTSVLQLLRT 398 (600)
Q Consensus 326 S~~vYg~~~----~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~--~~~~~~~~r~~~-~g~~~~~~~~~~~~~ 398 (600)
|.++||... ..+++|+.+..|. +.|+.+| ..+|.+++.+... .+++++++|+++ +|++...
T Consensus 135 S~~vyg~~~~~~~~~~~~E~~~~~p~-~~Y~~sK---~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~-------- 202 (699)
T 1z45_A 135 SATVYGDATRFPNMIPIPEECPLGPT-NPYGHTK---YAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSG-------- 202 (699)
T ss_dssp EGGGGCCGGGSTTCCSBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTS--------
T ss_pred cHHHhCCCccccccCCccccCCCCCC-ChHHHHH---HHHHHHHHHHHHhccCCCcEEEEEeccccCCCccc--------
Confidence 999998643 3578898887765 8999999 7899999998877 799999999987 5543211
Q ss_pred HHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHH-HhC--CCCceeeccC
Q psy16545 399 FERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFER-VTG--KPVPYIFYNL 475 (600)
Q Consensus 399 ~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~ 475 (600)
+||+.... .... ++..+.+ ..+ .++++ ++.
T Consensus 203 ---------------~~g~~~~~---------------------------~~~~---~~~~~~~~~~~~~~~~~~--~g~ 235 (699)
T 1z45_A 203 ---------------LIGEDPLG---------------------------IPNN---LLPYMAQVAVGRREKLYI--FGD 235 (699)
T ss_dssp ---------------SCCCCCSS---------------------------SCCS---HHHHHHHHHTTSSSCCCC--C--
T ss_pred ---------------cccccccc---------------------------chhH---HHHHHHHHHhcCCCceEE--eCC
Confidence 12221100 0000 1111111 112 23332 110
Q ss_pred --CCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCC-------CCceeEeEcCCCCCccHHHH
Q psy16545 476 --GTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK-------PVPYIFYNLGTGQGTSVLQL 546 (600)
Q Consensus 476 --~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~-------~~~~~~~nl~~~~~~s~~e~ 546 (600)
..+++.+. ++|+| |+|+++++..++.. ...+++||+++++.+|++|+
T Consensus 236 ~~~~~~g~~~----~~~i~--------------------v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el 291 (699)
T 1z45_A 236 DYDSRDGTPI----RDYIH--------------------VVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEV 291 (699)
T ss_dssp ----CCSSCE----ECEEE--------------------HHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHH
T ss_pred cccCCCCCee----EeeEE--------------------HHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHH
Confidence 01134444 88988 88888887776642 23468999999999999999
Q ss_pred HHHHhhhcCCcccccccCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 547 LRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 547 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
++.+++.+|.+.++...+.+..+.....+|++|++++|||+|+++++.+
T Consensus 292 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~~l~eg 340 (699)
T 1z45_A 292 YHAFCKASGIDLPYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDS 340 (699)
T ss_dssp HHHHHHHHTCCCCC---------CCCCCBCCHHHHHHTCCCCCCCHHHH
T ss_pred HHHHHHHhCCCCCceecCCCCCccccccCCHHHHHHhcCCCCCCCHHHH
Confidence 9999999998877666666666667788999999999999999988653
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-24 Score=219.54 Aligned_cols=233 Identities=15% Similarity=0.072 Sum_probs=177.2
Q ss_pred EEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCCC
Q psy16545 257 YSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL 336 (600)
Q Consensus 257 i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~ 336 (600)
+.+|+.+.+.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++.++ ||||+||.++||.....
T Consensus 36 ~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~ 114 (299)
T 1n2s_A 36 FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDI 114 (299)
T ss_dssp SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTC
T ss_pred ccccCCCHHHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCC
Confidence 46899999999999885459999999998665555678899999999999999999999887 89999999999988777
Q ss_pred CCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEEeeC
Q psy16545 337 PITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL 415 (600)
Q Consensus 337 ~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 415 (600)
+++|+++..|. ++|+.+| ..+|.+++.+. .+++++||+. +|+++...+
T Consensus 115 ~~~E~~~~~p~-~~Y~~sK---~~~E~~~~~~~----~~~~ilRp~~v~G~~~~~~~----------------------- 163 (299)
T 1n2s_A 115 PWQETDATSPL-NVYGKTK---LAGEKALQDNC----PKHLIFRTSWVYAGKGNNFA----------------------- 163 (299)
T ss_dssp CBCTTSCCCCS-SHHHHHH---HHHHHHHHHHC----SSEEEEEECSEECSSSCCHH-----------------------
T ss_pred CCCCCCCCCCc-cHHHHHH---HHHHHHHHHhC----CCeEEEeeeeecCCCcCcHH-----------------------
Confidence 89999988775 8999999 77899888764 3899999987 554432111
Q ss_pred CCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhhhcC
Q psy16545 416 GTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTG 495 (600)
Q Consensus 416 g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d 495 (600)
..++..+. .+.++++. +++. ++|+|
T Consensus 164 --------------------------------------~~~~~~~~--~~~~~~~~------~~~~------~~~i~--- 188 (299)
T 1n2s_A 164 --------------------------------------KTMLRLAK--ERQTLSVI------NDQY------GAPTG--- 188 (299)
T ss_dssp --------------------------------------HHHHHHHH--HCSEEEEE------CSCE------ECCEE---
T ss_pred --------------------------------------HHHHHHHh--cCCCEEee------cCcc------cCCee---
Confidence 11111111 13333321 3322 77888
Q ss_pred CCccccccCCCCCcchhHHHHHHHhhhhcCCC--C--ceeEeEcCCCCCccHHHHHHHHhhhcCCcc------cccccC-
Q psy16545 496 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP--V--PYIFYNLGTGQGTSVLQLLRTFERVTGKPV------PYIVEA- 564 (600)
Q Consensus 496 ~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~--~--~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~------~~~~~~- 564 (600)
++|+++++..++.++ . .+++||+++++.+|++|+++.+.+.+|.+. .+...+
T Consensus 189 -----------------v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~ 251 (299)
T 1n2s_A 189 -----------------AELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPT 251 (299)
T ss_dssp -----------------HHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECS
T ss_pred -----------------HHHHHHHHHHHHHHhccccccCceEEEeCCCCCCHHHHHHHHHHHhCCCcccccccccccccc
Confidence 888999988887654 2 378999999999999999999999998652 222222
Q ss_pred ----CCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 565 ----RREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 565 ----~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
..........+|++|++++|||+|+ +++.
T Consensus 252 ~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~ 284 (299)
T 1n2s_A 252 SAYPTPASRPGNSRLNTEKFQRNFDLILP-QWEL 284 (299)
T ss_dssp TTSCCSSCCCSBCCBCCHHHHHHHTCCCC-BHHH
T ss_pred ccccCcCCCCCceeeeHHHHHHhcCCCCC-CHHH
Confidence 1223345678999999999999998 6654
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.4e-24 Score=214.07 Aligned_cols=230 Identities=18% Similarity=0.100 Sum_probs=176.6
Q ss_pred EeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCCCC
Q psy16545 258 SCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLP 337 (600)
Q Consensus 258 ~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~~ 337 (600)
.+|+.+.+.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++.++ ||||+||.++||.....+
T Consensus 46 ~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~ 124 (292)
T 1vl0_A 46 DLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEP 124 (292)
T ss_dssp TCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSC
T ss_pred cCCCCCHHHHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCC
Confidence 4799999999998875578999999998655445578889999999999999999999988 999999999999877778
Q ss_pred CCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEEeeCC
Q psy16545 338 ITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLG 416 (600)
Q Consensus 338 ~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g 416 (600)
++|+++..|. ++|+.+| ..+|.+++.+ +.+++++||+. +|+ +...+
T Consensus 125 ~~E~~~~~~~-~~Y~~sK---~~~E~~~~~~----~~~~~~lR~~~v~G~-~~~~~------------------------ 171 (292)
T 1vl0_A 125 ITEFDEVNPQ-SAYGKTK---LEGENFVKAL----NPKYYIVRTAWLYGD-GNNFV------------------------ 171 (292)
T ss_dssp BCTTSCCCCC-SHHHHHH---HHHHHHHHHH----CSSEEEEEECSEESS-SSCHH------------------------
T ss_pred CCCCCCCCCc-cHHHHHH---HHHHHHHHhh----CCCeEEEeeeeeeCC-CcChH------------------------
Confidence 9999988775 8999999 7789988876 34789999887 544 11111
Q ss_pred CCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhhhcCC
Q psy16545 417 TGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK 496 (600)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~ 496 (600)
..++..+. .+.++++. +++. ++|+|
T Consensus 172 -------------------------------------~~~~~~~~--~~~~~~~~------~~~~------~~~i~---- 196 (292)
T 1vl0_A 172 -------------------------------------KTMINLGK--THDELKVV------HDQV------GTPTS---- 196 (292)
T ss_dssp -------------------------------------HHHHHHHH--HCSEEEEE------SSCE------ECCEE----
T ss_pred -------------------------------------HHHHHHHh--cCCcEEee------cCee------eCCcc----
Confidence 11111111 13333321 2222 67777
Q ss_pred CccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCC-----CCCCcc
Q psy16545 497 PVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEAR-----REGDIV 571 (600)
Q Consensus 497 ~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~-----~~~~~~ 571 (600)
++|+++++..++..+ .+++||+++++.+|+.|+++.+.+.+|.+.++...+. ....+.
T Consensus 197 ----------------v~Dva~~~~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 259 (292)
T 1vl0_A 197 ----------------TVDLARVVLKVIDEK-NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPK 259 (292)
T ss_dssp ----------------HHHHHHHHHHHHHHT-CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCS
T ss_pred ----------------HHHHHHHHHHHHhcC-CCcEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCc
Confidence 889999998887665 6889999999999999999999999998755443332 223455
Q ss_pred ccccChHHHHHHcCceeeEEEEe
Q psy16545 572 SMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 572 ~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
...+|++|++++|||+|+ +++.
T Consensus 260 ~~~~d~~k~~~~lG~~p~-~~~~ 281 (292)
T 1vl0_A 260 YSVLRNYMLELTTGDITR-EWKE 281 (292)
T ss_dssp BCCBCCHHHHHTTCCCCC-BHHH
T ss_pred cccccHHHHHHHcCCCCC-CHHH
Confidence 678999999999999998 8764
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.3e-24 Score=214.80 Aligned_cols=193 Identities=18% Similarity=0.128 Sum_probs=165.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCChh
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPL 87 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~ 87 (600)
.|||++|++|+++.+ .+...+.++++++|..+|+.|.+.+.+ +++..++|+||||||.........++.
T Consensus 9 lVtGatG~iG~~l~~--~L~~~g~~V~~~~r~~~D~~d~~~~~~---------~~~~~~~d~vi~~a~~~~~~~~~~~~~ 77 (287)
T 3sc6_A 9 IITGANGQLGKQLQE--ELNPEEYDIYPFDKKLLDITNISQVQQ---------VVQEIRPHIIIHCAAYTKVDQAEKERD 77 (287)
T ss_dssp EEESTTSHHHHHHHH--HSCTTTEEEEEECTTTSCTTCHHHHHH---------HHHHHCCSEEEECCCCCCHHHHTTCHH
T ss_pred EEECCCCHHHHHHHH--HHHhCCCEEEEecccccCCCCHHHHHH---------HHHhcCCCEEEECCcccChHHHhcCHH
Confidence 589999999999955 566667899999999999999999988 555447999999999987665667889
Q ss_pred hhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEE
Q psy16545 88 MYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIIS 167 (600)
Q Consensus 88 ~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~i 167 (600)
..+++|+.++.+++++|++.++ |||++||.++||.....+++|+++. .|.++|+.+|.++|++++.+.. ++++
T Consensus 78 ~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~-~p~~~Y~~sK~~~E~~~~~~~~-----~~~i 150 (287)
T 3sc6_A 78 LAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNP-APINIYGASKYAGEQFVKELHN-----KYFI 150 (287)
T ss_dssp HHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCC-CCCSHHHHHHHHHHHHHHHHCS-----SEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHhCC-----CcEE
Confidence 9999999999999999999998 7999999999998877899999999 8999999999999999988754 5699
Q ss_pred EecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 168 LRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 168 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
+||+++|||.. ..+++.+.+.+. .++++++.|+ +.++++|++|+++.+..+
T Consensus 151 lR~~~v~G~~~------------~~~~~~~~~~~~-~~~~~~~~~~--~~~~~i~v~Dva~~~~~~ 201 (287)
T 3sc6_A 151 VRTSWLYGKYG------------NNFVKTMIRLGK-EREEISVVAD--QIGSPTYVADLNVMINKL 201 (287)
T ss_dssp EEECSEECSSS------------CCHHHHHHHHHT-TCSEEEEECS--CEECCEEHHHHHHHHHHH
T ss_pred EeeeeecCCCC------------CcHHHHHHHHHH-cCCCeEeecC--cccCceEHHHHHHHHHHH
Confidence 99999999952 236777777665 5578888775 889999999988765544
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.9e-24 Score=224.65 Aligned_cols=182 Identities=31% Similarity=0.512 Sum_probs=150.1
Q ss_pred cccccChHHhhhHHhhhhcccccccCC-CCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCc
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTHD-IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSC 118 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~~-~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~ 118 (600)
.+|++|.+++.+ +++..+ +|+||||||.........++...+++|+.++.+|+++|++.++++||++||.
T Consensus 75 ~~Dl~d~~~~~~---------~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~ 145 (397)
T 1gy8_A 75 VGDVRNEDFLNG---------VFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSA 145 (397)
T ss_dssp ESCTTCHHHHHH---------HHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred ECCCCCHHHHHH---------HHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCH
Confidence 678888888887 554445 9999999998754334456788999999999999999999999999999999
Q ss_pred cccCCCC-------CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCccc
Q psy16545 119 TVYGEPQ-------FLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFT 191 (600)
Q Consensus 119 ~vyg~~~-------~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~ 191 (600)
++||... ..+++|+++. .|.++|+.||+++|++++.++.++ +++++++||++||||+..+.+|+.... ..
T Consensus 146 ~v~g~~~~~~~~~~~~~~~E~~~~-~p~~~Y~~sK~~~e~~~~~~~~~~-gi~~~ilRp~~v~G~~~~~~~g~~~~~-~~ 222 (397)
T 1gy8_A 146 AIFGNPTMGSVSTNAEPIDINAKK-SPESPYGESKLIAERMIRDCAEAY-GIKGICLRYFNACGAHEDGDIGEHYQG-ST 222 (397)
T ss_dssp GGTBSCCC-----CCCCBCTTSCC-BCSSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECCCTTSSCSCCSTT-CC
T ss_pred HHhCCCCcccccccccCcCccCCC-CCCCchHHHHHHHHHHHHHHHHHH-CCcEEEEeccceeCCCccccccccccc-hh
Confidence 9998765 5789999998 899999999999999999999887 999999999999999877777655332 24
Q ss_pred chhHHHH-----HhhcCCC----------CeEEEec------CCcccccCcceEEeeeccccc
Q psy16545 192 NIMPYLA-----QVAIGSK----------PHFTVFG------ADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 192 ~~~~~~~-----~~~~~~~----------~~~~v~g------~g~~~~~~~~v~d~v~~~~~a 233 (600)
.+++.+. +.+.+.. ++++++| +|.+.|+++|++|+++.+..+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~ 285 (397)
T 1gy8_A 223 HLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILA 285 (397)
T ss_dssp SHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHH
Confidence 5777776 6555443 4688888 789999999999999876654
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=4e-24 Score=217.30 Aligned_cols=241 Identities=16% Similarity=0.148 Sum_probs=167.4
Q ss_pred EEeecCChhhHHHHhhcC---CccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCC
Q psy16545 257 YSCDLVDKNRLGEIFAKH---DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP 333 (600)
Q Consensus 257 i~~Dl~~~~~l~~~l~~~---~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~ 333 (600)
+.+|+.+.+.+.++++.. ++|+|||+|+.... +..++...++.|+.++.+++++|++.++ ||||+||.++||..
T Consensus 47 ~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~ 123 (310)
T 1eq2_A 47 IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGR 123 (310)
T ss_dssp CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTC
T ss_pred eccccccHHHHHHHHhccccCCCcEEEECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCC
Confidence 678999998888888631 48999999997643 4567888999999999999999999999 99999999999987
Q ss_pred CCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEE
Q psy16545 334 QFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIF 412 (600)
Q Consensus 334 ~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~ 412 (600)
...+++|+++..|. ++|+.+| ..+|.+++.+...++++++++||+. +|+++.....
T Consensus 124 ~~~~~~E~~~~~p~-~~Y~~sK---~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~------------------- 180 (310)
T 1eq2_A 124 TSDFIESREYEKPL-NVYGYSK---FLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS------------------- 180 (310)
T ss_dssp CSCBCSSGGGCCCS-SHHHHHH---HHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGG-------------------
T ss_pred CCCCCCCCCCCCCC-ChhHHHH---HHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCc-------------------
Confidence 76788999988775 8999999 7899999999888899999999987 5554321000
Q ss_pred eeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCccc-chhhhhhhh
Q psy16545 413 YNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTS-VLQLLRTFE 491 (600)
Q Consensus 413 ~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~fi 491 (600)
....+..++..+ ..+.++++ + +++.+ . ++|+
T Consensus 181 ------------------------------------~~~~~~~~~~~~--~~~~~~~~----~--~~g~~~~----~~~i 212 (310)
T 1eq2_A 181 ------------------------------------MASVAFHLNTQL--NNGESPKL----F--EGSENFK----RDFV 212 (310)
T ss_dssp ------------------------------------GSCHHHHHHHHH--HC-------------------C----BCEE
T ss_pred ------------------------------------cchHHHHHHHHH--HcCCCcEE----e--cCCCcce----EccE
Confidence 000011111111 11333332 1 33333 3 7888
Q ss_pred hhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCCC----
Q psy16545 492 RVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE---- 567 (600)
Q Consensus 492 ~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~---- 567 (600)
| ++|+++++..++..+. +++||+++++.+|+.|+++.+.+.+|.+ ++.+.+.+.
T Consensus 213 ~--------------------v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~ 270 (310)
T 1eq2_A 213 Y--------------------VGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDKLKG 270 (310)
T ss_dssp E--------------------HHHHHHHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC---------------------
T ss_pred E--------------------HHHHHHHHHHHHhcCC-CCeEEEeCCCccCHHHHHHHHHHHcCCC-CceeCCCChhhhc
Confidence 8 8899999988887655 8899999999999999999999999976 333333221
Q ss_pred CCccccccChHHHHHHcCc-eeeEEEEe
Q psy16545 568 GDIVSMYANTDLAQRELGW-SARCTVKI 594 (600)
Q Consensus 568 ~~~~~~~~d~~k~~~~lG~-~p~~~l~~ 594 (600)
........|++|+++ ||| +|.++++.
T Consensus 271 ~~~~~~~~~~~~~~~-lG~~~~~~~l~~ 297 (310)
T 1eq2_A 271 RYQAFTQADLTNLRA-AGYDKPFKTVAE 297 (310)
T ss_dssp -CCCSCCBCCHHHHH-TTCCCCCCCHHH
T ss_pred ccccccccchHHHHh-cCCCCCCCCHHH
Confidence 123346789999987 999 79888764
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.8e-24 Score=217.35 Aligned_cols=203 Identities=19% Similarity=0.186 Sum_probs=161.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAV 76 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~ 76 (600)
.|||++|++|+++.+... ..+.++++++|+ .+|++|.+++.+ +++..++|+||||||.
T Consensus 16 lVTGatG~iG~~l~~~L~--~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~---------~~~~~~~d~vih~A~~ 84 (321)
T 2pk3_A 16 LITGVAGFVGKYLANHLT--EQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKK---------VISDIKPDYIFHLAAK 84 (321)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHH---------HHHHHCCSEEEECCSC
T ss_pred EEECCCChHHHHHHHHHH--HCCCEEEEEecCCccccceeeEEECCCCCHHHHHH---------HHHhcCCCEEEEcCcc
Confidence 489999999999966332 233445444543 689999998888 5553359999999998
Q ss_pred cCcccCCCChhhhHHhHHHHHHHHHHHHHHc-CCCeEEEecCccccCCC--CCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q psy16545 77 KAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTVYGEP--QFLPITEDHPTGNIKNVYGKTKHFIEEML 153 (600)
Q Consensus 77 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~r~I~~SS~~vyg~~--~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~ 153 (600)
........++...+++|+.|+.+++++|++. ++++||++||.++||.. ...+++|+++. .|.++|+.||.++|+++
T Consensus 85 ~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~-~~~~~Y~~sK~~~E~~~ 163 (321)
T 2pk3_A 85 SSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQL-RPMSPYGVSKASVGMLA 163 (321)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCC-BCCSHHHHHHHHHHHHH
T ss_pred cchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCC-CCCCccHHHHHHHHHHH
Confidence 7654456678889999999999999999876 58899999999999876 56789999999 89999999999999999
Q ss_pred HHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcC--CC--CeEEEecCCcccccCcceEEeeec
Q psy16545 154 KDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIG--SK--PHFTVFGADYETEDGTGKVVAIDN 229 (600)
Q Consensus 154 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~v~g~g~~~~~~~~v~d~v~~ 229 (600)
+.++.++ +++++++||+++|||.... ..+++.+...+.. .+ +++.++++|.+.+++++++|+++.
T Consensus 164 ~~~~~~~-gi~~~ilrp~~v~g~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a 232 (321)
T 2pk3_A 164 RQYVKAY-GMDIIHTRTFNHIGPGQSL----------GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQA 232 (321)
T ss_dssp HHHHHHH-CCEEEEEEECEEECTTCCT----------TSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHH
T ss_pred HHHHHHc-CCCEEEEEeCcccCcCCCC----------CchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHH
Confidence 9998876 9999999999999996431 2244544443321 13 467788999999999999998876
Q ss_pred cccc
Q psy16545 230 FVNS 233 (600)
Q Consensus 230 ~~~a 233 (600)
+..+
T Consensus 233 ~~~~ 236 (321)
T 2pk3_A 233 YWLL 236 (321)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.1e-24 Score=215.79 Aligned_cols=204 Identities=22% Similarity=0.229 Sum_probs=160.1
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEEEc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHF 73 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~ 73 (600)
|||++|++|+++.+. +...+.+++++++. .+|++|.+++.+ +++..++|+|||+
T Consensus 5 VTGatG~iG~~l~~~--L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---------~~~~~~~d~vi~~ 73 (311)
T 2p5y_A 5 VTGGAGFIGSHIVED--LLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVER---------AFREFRPTHVSHQ 73 (311)
T ss_dssp EETTTSHHHHHHHHH--HHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHH---------HHHHHCCSEEEEC
T ss_pred EEeCCcHHHHHHHHH--HHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHH---------HHHhcCCCEEEEC
Confidence 799999999999653 22333344444431 579999888888 5543479999999
Q ss_pred CcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCc-cccCC-CCCCCCCCCCCCCCCCChHHHHHHHHHH
Q psy16545 74 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSC-TVYGE-PQFLPITEDHPTGNIKNVYGKTKHFIEE 151 (600)
Q Consensus 74 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~-~vyg~-~~~~~~~E~~~~~~p~s~Y~~sK~~~e~ 151 (600)
|+.........++...+++|+.|+.+++++|++.++++||++||. ++||. ....+++|+++. .|.++|+.||.++|+
T Consensus 74 a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~-~~~~~Y~~sK~~~e~ 152 (311)
T 2p5y_A 74 AAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPP-RPKSPYAASKAAFEH 152 (311)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCC-CCCSHHHHHHHHHHH
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCC-CCCChHHHHHHHHHH
Confidence 998654434567788999999999999999999999999999999 89986 455688999998 889999999999999
Q ss_pred HHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEe-----cCCcccccCcceEEe
Q psy16545 152 MLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVF-----GADYETEDGTGKVVA 226 (600)
Q Consensus 152 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-----g~g~~~~~~~~v~d~ 226 (600)
+++.+++++ +++++++||+++|||...... ...+++.+.+.+. .++++.++ |+|.+.|+++|++|+
T Consensus 153 ~~~~~~~~~-~~~~~~lrp~~v~Gp~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~i~v~Dv 223 (311)
T 2p5y_A 153 YLSVYGQSY-GLKWVSLRYGNVYGPRQDPHG-------EAGVVAIFAERVL-KGLPVTLYARKTPGDEGCVRDYVYVGDV 223 (311)
T ss_dssp HHHHHHHHH-CCCEEEEEECEEECTTCCSSS-------TTHHHHHHHHHHH-HTCCEEEECSSSTTSCCCEECEEEHHHH
T ss_pred HHHHHHHHc-CCCEEEEeeccccCcCCCCCC-------cCcHHHHHHHHHH-cCCCcEEEecccCCCCCeEEeeEEHHHH
Confidence 999998877 999999999999999643211 1345666555444 34577788 999999999999998
Q ss_pred eeccccc
Q psy16545 227 IDNFVNS 233 (600)
Q Consensus 227 v~~~~~a 233 (600)
++.+..+
T Consensus 224 a~a~~~~ 230 (311)
T 2p5y_A 224 AEAHALA 230 (311)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8765533
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.1e-23 Score=211.59 Aligned_cols=247 Identities=15% Similarity=0.158 Sum_probs=178.3
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 332 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~ 332 (600)
+++++.+|+.+.+.+.++++..++|+|||+|+.... ....++...++.|+.++.+++++|++.+++||||+||.++||.
T Consensus 40 ~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~ 118 (317)
T 3ajr_A 40 GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSA-KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGP 118 (317)
T ss_dssp TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCT
T ss_pred CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCC-ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCC
Confidence 357889999999999999886689999999997532 2345778899999999999999999999999999999999997
Q ss_pred C-CCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcce
Q psy16545 333 P-QFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPY 410 (600)
Q Consensus 333 ~-~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~ 410 (600)
. ...+.+|+.+..|. ++|+.+| ..+|.+++.+.+.++++++++|+++ +|++..
T Consensus 119 ~~~~~~~~e~~~~~p~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~--------------------- 173 (317)
T 3ajr_A 119 ETPKNKVPSITITRPR-TMFGVTK---IAAELLGQYYYEKFGLDVRSLRYPGIISYKAE--------------------- 173 (317)
T ss_dssp TSCSSSBCSSSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECEEECSSSC---------------------
T ss_pred CCCCCCccccccCCCC-chHHHHH---HHHHHHHHHHHHhcCCeEEEEecCcEeccCCC---------------------
Confidence 5 33467788877765 8999999 7899999999888899999999776 543210
Q ss_pred EEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHH-HHHhCCCCceeeccCCCCCcccchhhhhh
Q psy16545 411 IFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF-ERVTGKPVPYIFYNLGTGQGTSVLQLLRT 489 (600)
Q Consensus 411 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 489 (600)
|+... . ..+...+ ....+.++++ ++.+++. ++
T Consensus 174 ------~~~~~----------------------------~---~~~~~~~~~~~~~~~~~~----~~~~~~~------~~ 206 (317)
T 3ajr_A 174 ------PTAGT----------------------------T---DYAVEIFYYAVKREKYKC----YLAPNRA------LP 206 (317)
T ss_dssp ------CCSCS----------------------------S---THHHHHHHHHHTTCCEEE----CSCTTCC------EE
T ss_pred ------CCCcc----------------------------h---hHHHHHHHHHHhCCCcee----ecCccce------ee
Confidence 00000 0 0001111 1112233222 1223333 78
Q ss_pred hhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCC----ceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCC
Q psy16545 490 FERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV----PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEAR 565 (600)
Q Consensus 490 fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~----~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 565 (600)
|+| ++|+++++..++..+. .+++||+++ ..+|+.|+++.+.+.+|. ..+.+.+.
T Consensus 207 ~i~--------------------v~Dva~a~~~~l~~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~ 264 (317)
T 3ajr_A 207 MMY--------------------MPDALKALVDLYEADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIPE-FEIEYKED 264 (317)
T ss_dssp EEE--------------------HHHHHHHHHHHHHCCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCCS-CCEEECCC
T ss_pred eeE--------------------HHHHHHHHHHHHhCCccccccCceEecCC-ccccHHHHHHHHHHHCCc-cccccccc
Confidence 888 8899999988876543 248999986 589999999999999983 23333321
Q ss_pred CCC---CccccccChHHHHHHcCceeeEEEEe
Q psy16545 566 REG---DIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 566 ~~~---~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
... ......+|++|++++|||+|+++++.
T Consensus 265 ~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~ 296 (317)
T 3ajr_A 265 FRDKIAATWPESLDSSEASNEWGFSIEYDLDR 296 (317)
T ss_dssp HHHHHHTTSCSCBCCHHHHHHHCCCCCCCHHH
T ss_pred cchhhccccccccCHHHHHHHcCCCCCCCHHH
Confidence 000 11234679999999999999998864
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=215.19 Aligned_cols=201 Identities=17% Similarity=0.165 Sum_probs=160.8
Q ss_pred CCCCcchHHHHHHHhhhcc-CCC---ccEEecccc---------------------cccccChHHhhhHHhhhhcccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVT-GKP---VPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~-~~~---~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
|||++|++|+++.+..... +.+ .++++++|. .+|++|.+++.+ ++.
T Consensus 5 VTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~ 75 (337)
T 1r6d_A 5 VTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAR---------ELR 75 (337)
T ss_dssp EETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHH---------HTT
T ss_pred EECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHH---------Hhc
Confidence 8999999999996533221 113 344444431 478888888887 664
Q ss_pred cCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHH
Q psy16545 64 THDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYG 143 (600)
Q Consensus 64 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~ 143 (600)
++|+||||||......+..++...+++|+.++.+++++|.+.++++||++||.++||.....+++|+++. .|.++|+
T Consensus 76 --~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~-~~~~~Y~ 152 (337)
T 1r6d_A 76 --GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPL-EPNSPYA 152 (337)
T ss_dssp --TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCC-CCCSHHH
T ss_pred --CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCC-CCCCchH
Confidence 8999999999875433345677899999999999999999999999999999999997666789999998 8999999
Q ss_pred HHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcce
Q psy16545 144 KTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGK 223 (600)
Q Consensus 144 ~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v 223 (600)
.||+++|++++.++.++ +++++++||+++|||.... ..+++.+...+. .+++++++++|.+.++++|+
T Consensus 153 ~sK~~~e~~~~~~~~~~-g~~~~ilrp~~v~G~~~~~----------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v 220 (337)
T 1r6d_A 153 ASKAGSDLVARAYHRTY-GLDVRITRCCNNYGPYQHP----------EKLIPLFVTNLL-DGGTLPLYGDGANVREWVHT 220 (337)
T ss_dssp HHHHHHHHHHHHHHHHH-CCCEEEEEECEEECTTCCT----------TSHHHHHHHHHH-TTCCEEEETTSCCEEEEEEH
T ss_pred HHHHHHHHHHHHHHHHH-CCCEEEEEeeeeECCCCCC----------CChHHHHHHHHh-cCCCcEEeCCCCeeEeeEeH
Confidence 99999999999998877 9999999999999996431 235665555554 44678888999999999999
Q ss_pred EEeeeccccc
Q psy16545 224 VVAIDNFVNS 233 (600)
Q Consensus 224 ~d~v~~~~~a 233 (600)
+|+++.+..+
T Consensus 221 ~Dva~a~~~~ 230 (337)
T 1r6d_A 221 DDHCRGIALV 230 (337)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9988766544
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-23 Score=214.97 Aligned_cols=202 Identities=19% Similarity=0.171 Sum_probs=157.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTHD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~ 66 (600)
.|||++|++|+++.+.....+.+.++++++|. .+|++|.+++.+ ++. +
T Consensus 7 lVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~--~ 75 (336)
T 2hun_A 7 LVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKE---------LVR--K 75 (336)
T ss_dssp EEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHH---------HHH--T
T ss_pred EEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHH---------Hhh--C
Confidence 48999999999996533222212333333321 578999888888 664 8
Q ss_pred CCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCC-CeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHH
Q psy16545 67 IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV-YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKT 145 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~s 145 (600)
+|+||||||......+..++...+++|+.++.+++++|.+.+. ++||++||.++||.....+++|+++. .|.++|+.|
T Consensus 76 ~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~-~~~~~Y~~s 154 (336)
T 2hun_A 76 VDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRL-MPSSPYSAT 154 (336)
T ss_dssp CSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCC-CCCSHHHHH
T ss_pred CCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCC-CCCCccHHH
Confidence 9999999998754334456778999999999999999998865 79999999999997666789999998 899999999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEE
Q psy16545 146 KHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVV 225 (600)
Q Consensus 146 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d 225 (600)
|.++|++++.++.++ +++++++||++||||.... ..+++.+.+.+. .+++++++++|.+.++++|++|
T Consensus 155 K~~~e~~~~~~~~~~-~~~~~ilrp~~v~g~~~~~----------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D 222 (336)
T 2hun_A 155 KAASDMLVLGWTRTY-NLNASITRCTNNYGPYQFP----------EKLIPKTIIRAS-LGLKIPIYGTGKNVRDWLYVED 222 (336)
T ss_dssp HHHHHHHHHHHHHHT-TCEEEEEEECEEESTTCCT----------TSHHHHHHHHHH-TTCCEEEETC---CEEEEEHHH
T ss_pred HHHHHHHHHHHHHHh-CCCEEEEeeeeeeCcCCCc----------CchHHHHHHHHH-cCCCceEeCCCCceeeeEEHHH
Confidence 999999999998887 9999999999999996421 235666655554 4467888999999999999999
Q ss_pred eeeccccc
Q psy16545 226 AIDNFVNS 233 (600)
Q Consensus 226 ~v~~~~~a 233 (600)
+++.+..+
T Consensus 223 va~~~~~~ 230 (336)
T 2hun_A 223 HVRAIELV 230 (336)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88766544
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.9e-23 Score=215.54 Aligned_cols=241 Identities=16% Similarity=0.146 Sum_probs=181.3
Q ss_pred EEeecCChhhHHHHhhcC---CccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCC
Q psy16545 257 YSCDLVDKNRLGEIFAKH---DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP 333 (600)
Q Consensus 257 i~~Dl~~~~~l~~~l~~~---~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~ 333 (600)
+.+|+.+.+.+..+++.. ++|+|||+|+.... ...++...++.|+.++.+++++|++.++ ||||+||.++||..
T Consensus 94 ~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~ 170 (357)
T 2x6t_A 94 IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGR 170 (357)
T ss_dssp CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSC
T ss_pred EeeecCcHHHHHHHHhhcccCCCCEEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCC
Confidence 678999998888887631 58999999997543 4567888999999999999999999998 99999999999987
Q ss_pred CCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEE
Q psy16545 334 QFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIF 412 (600)
Q Consensus 334 ~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~ 412 (600)
...+++|+.+..|. ++|+.+| ..+|.+++.+....+++++++||+. +|+++....
T Consensus 171 ~~~~~~E~~~~~p~-~~Y~~sK---~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~-------------------- 226 (357)
T 2x6t_A 171 TSDFIESREYEKPL-NVFGYSK---FLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKG-------------------- 226 (357)
T ss_dssp SSCCCSSGGGCCCS-SHHHHHH---HHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCG--------------------
T ss_pred CCCCcCCcCCCCCC-ChhHHHH---HHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCc--------------------
Confidence 77789999988775 8999999 8899999999888899999999887 554332100
Q ss_pred eeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCccc-chhhhhhhh
Q psy16545 413 YNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTS-VLQLLRTFE 491 (600)
Q Consensus 413 ~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~fi 491 (600)
.....+..++..+ ..+.++++. +++.+ . ++|+
T Consensus 227 -----------------------------------~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~----~~~i 259 (357)
T 2x6t_A 227 -----------------------------------SMASVAFHLNTQL--NNGESPKLF------EGSENFK----RDFV 259 (357)
T ss_dssp -----------------------------------GGSCHHHHHHHHH--HTTCCCEEE------TTGGGCE----ECEE
T ss_pred -----------------------------------ccchHHHHHHHHH--HcCCCcEEe------CCCCcce----EccE
Confidence 0000011122211 124444431 34443 3 7888
Q ss_pred hhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCCC----
Q psy16545 492 RVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE---- 567 (600)
Q Consensus 492 ~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~---- 567 (600)
| ++|+++++..++..+. +++||+++++.+|+.|+++.+.+.+|.+ ++.+.+.+.
T Consensus 260 ~--------------------v~Dva~ai~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~ 317 (357)
T 2x6t_A 260 Y--------------------VGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDKLKG 317 (357)
T ss_dssp E--------------------HHHHHHHHHHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCC-CCEEECCCGGGTT
T ss_pred E--------------------HHHHHHHHHHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCCC-CceecCCCccccc
Confidence 8 8899999998887654 8899999999999999999999999986 333333221
Q ss_pred CCccccccChHHHHHHcCc-eeeEEEEe
Q psy16545 568 GDIVSMYANTDLAQRELGW-SARCTVKI 594 (600)
Q Consensus 568 ~~~~~~~~d~~k~~~~lG~-~p~~~l~~ 594 (600)
.......+|++|+++ ||| .|.++++.
T Consensus 318 ~~~~~~~~~~~k~~~-lG~~~~~~~l~e 344 (357)
T 2x6t_A 318 RYQAFTQADLTNLRA-AGYDKPFKTVAE 344 (357)
T ss_dssp SCCSBCCCCCHHHHH-TTCCCCCCCHHH
T ss_pred ccccccccCHHHHHH-cCCCCCCCCHHH
Confidence 123356789999987 999 79888764
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-23 Score=215.14 Aligned_cols=234 Identities=17% Similarity=0.124 Sum_probs=170.6
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 332 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~ 332 (600)
+++++.+|+.+.+.+.++++ ++|+|||+|+... .+..++...++.|+.++.+++++|++.+++||||+||.++|+.
T Consensus 57 ~~~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~ 132 (342)
T 2x4g_A 57 EPECRVAEMLDHAGLERALR--GLDGVIFSAGYYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPR 132 (342)
T ss_dssp CCEEEECCTTCHHHHHHHTT--TCSEEEEC--------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCC
T ss_pred CeEEEEecCCCHHHHHHHHc--CCCEEEECCccCc--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCc
Confidence 67899999999999999998 7999999999753 2345677889999999999999999999999999999999987
Q ss_pred CCC--CCCCCCCCCCCC---CcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCC-cchHHHHHHHHHHHhCC
Q psy16545 333 PQF--LPITEDHPTGNI---KNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQ-GTSVLQLLRTFERVTGN 405 (600)
Q Consensus 333 ~~~--~~~~E~~~~~~~---~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~-~~~~~~~~~~~~~~~g~ 405 (600)
... .+ +|+++..|. .+.|+.+| ..+|.+++.++.. +++++++||+. +|++. ...+
T Consensus 133 ~~~~~~~-~E~~~~~p~~~~~~~Y~~sK---~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~~------------- 194 (342)
T 2x4g_A 133 HPQGLPG-HEGLFYDSLPSGKSSYVLCK---WALDEQAREQARN-GLPVVIGIPGMVLGELDIGPTT------------- 194 (342)
T ss_dssp CTTSSCB-CTTCCCSSCCTTSCHHHHHH---HHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCST-------------
T ss_pred CCCCCCC-CCCCCCCccccccChHHHHH---HHHHHHHHHHhhc-CCcEEEEeCCceECCCCccccH-------------
Confidence 654 45 899888771 38999999 7899999999877 99999999887 44432 1000
Q ss_pred CCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchh
Q psy16545 406 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQ 485 (600)
Q Consensus 406 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 485 (600)
..++..+. .+.+.++ +++.
T Consensus 195 ------------------------------------------------~~~~~~~~--~~~~~~~-------~~~~---- 213 (342)
T 2x4g_A 195 ------------------------------------------------GRVITAIG--NGEMTHY-------VAGQ---- 213 (342)
T ss_dssp ------------------------------------------------THHHHHHH--TTCCCEE-------ECCE----
T ss_pred ------------------------------------------------HHHHHHHH--cCCCccc-------cCCC----
Confidence 01111111 1333221 2222
Q ss_pred hhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCC
Q psy16545 486 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEAR 565 (600)
Q Consensus 486 ~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 565 (600)
++|+| ++|+++++..++..+..+++||+++++ +|+.|+++.+.+.+|.+.++ ..|.
T Consensus 214 --~~~i~--------------------v~Dva~~~~~~~~~~~~g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~-~~p~ 269 (342)
T 2x4g_A 214 --RNVID--------------------AAEAGRGLLMALERGRIGERYLLTGHN-LEMADLTRRIAELLGQPAPQ-PMSM 269 (342)
T ss_dssp --EEEEE--------------------HHHHHHHHHHHHHHSCTTCEEEECCEE-EEHHHHHHHHHHHHTCCCCE-EECH
T ss_pred --cceee--------------------HHHHHHHHHHHHhCCCCCceEEEcCCc-ccHHHHHHHHHHHhCCCCCC-cCCH
Confidence 77877 889999998888655448899999999 99999999999999986554 3222
Q ss_pred C---------------CC-------C-----ccccccChHHHHHHcCc-eeeEEEEe
Q psy16545 566 R---------------EG-------D-----IVSMYANTDLAQRELGW-SARCTVKI 594 (600)
Q Consensus 566 ~---------------~~-------~-----~~~~~~d~~k~~~~lG~-~p~~~l~~ 594 (600)
. .+ + .....+|++|++++||| +| ++++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~~p-~~~~~ 325 (342)
T 2x4g_A 270 AMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFST-TALDD 325 (342)
T ss_dssp HHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHHCCCCC-SCHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhCCCCCC-CCHHH
Confidence 1 00 1 23567899999999999 99 88764
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-23 Score=217.77 Aligned_cols=204 Identities=21% Similarity=0.239 Sum_probs=161.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------------cccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------------EGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------------~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
.|||++|++|+++.+... ..+.++++++|. .+|+.|.+++.+ +
T Consensus 31 lVtGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~ 99 (352)
T 1sb8_A 31 LITGVAGFIGSNLLETLL--KLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNN---------A 99 (352)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHH---------H
T ss_pred EEECCCcHHHHHHHHHHH--HCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHH---------H
Confidence 589999999999965322 122233333321 578999888888 6
Q ss_pred cccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 62 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
++ ++|+||||||.........++...+++|+.++.+|+++|++.++++||++||.++|+.....+++|+++. .|.++
T Consensus 100 ~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~-~~~~~ 176 (352)
T 1sb8_A 100 CA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIG-KPLSP 176 (352)
T ss_dssp HT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCC-CCCSH
T ss_pred hc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCC-CCCCh
Confidence 66 8999999999865433446778899999999999999999999999999999999998766789999998 89999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCc
Q psy16545 142 YGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGT 221 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~ 221 (600)
|+.||+++|++++.++.+. +++++++||+++|||..... +....+++.+...+. .++++.++|+|.+.++++
T Consensus 177 Y~~sK~~~e~~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~g~g~~~~~~i 248 (352)
T 1sb8_A 177 YAVTKYVNELYADVFSRCY-GFSTIGLRYFNVFGRRQDPN------GAYAAVIPKWTSSMI-QGDDVYINGDGETSRDFC 248 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-CCCCEEEEECCEECTTCCCC------STTCCHHHHHHHHHH-HTCCCEEESSSCCEECCE
T ss_pred hHHHHHHHHHHHHHHHHHc-CCCEEEEEECceeCcCCCCC------cchhhHHHHHHHHHH-CCCCcEEeCCCCceEeeE
Confidence 9999999999999998877 99999999999999964321 111345665555444 345677789999999999
Q ss_pred ceEEeeeccccc
Q psy16545 222 GKVVAIDNFVNS 233 (600)
Q Consensus 222 ~v~d~v~~~~~a 233 (600)
+++|+++.+..+
T Consensus 249 ~v~Dva~a~~~~ 260 (352)
T 1sb8_A 249 YIENTVQANLLA 260 (352)
T ss_dssp EHHHHHHHHHHH
T ss_pred EHHHHHHHHHHH
Confidence 999988765544
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-23 Score=215.32 Aligned_cols=205 Identities=17% Similarity=0.097 Sum_probs=158.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTHD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~ 66 (600)
.|||++|++|+++.+... ..+.++++++|. .+|++|.+++.+ +++..+
T Consensus 18 lVTGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~~~~ 86 (335)
T 1rpn_A 18 LVTGITGQDGAYLAKLLL--EKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQR---------AVIKAQ 86 (335)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHH---------HHHHHC
T ss_pred EEECCCChHHHHHHHHHH--HCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHH---------HHHHcC
Confidence 489999999999965322 222333333332 578999888888 554336
Q ss_pred CCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCC-CeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHH
Q psy16545 67 IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV-YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKT 145 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~s 145 (600)
+|+||||||.........++...+++|+.++.+|+++|++.++ ++||++||.++||.....+++|+++. .|.++|+.|
T Consensus 87 ~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~-~p~~~Y~~s 165 (335)
T 1rpn_A 87 PQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPF-YPRSPYGVA 165 (335)
T ss_dssp CSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCC-CCCSHHHHH
T ss_pred CCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCC-CCCChhHHH
Confidence 8999999998765444567888999999999999999999886 89999999999998776789999999 899999999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHH-HhhcCCCCeEEEecCCcccccCcceE
Q psy16545 146 KHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLA-QVAIGSKPHFTVFGADYETEDGTGKV 224 (600)
Q Consensus 146 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~g~g~~~~~~~~v~ 224 (600)
|+++|++++.++.++ +++++++||+++|||+....+ ...++..+. +...+. .+...+|+|.+.++++|++
T Consensus 166 K~~~e~~~~~~~~~~-~~~~~i~r~~~v~Gp~~~~~~-------~~~~~~~~~~~~~~g~-~~~~~~g~g~~~~~~i~v~ 236 (335)
T 1rpn_A 166 KLYGHWITVNYRESF-GLHASSGILFNHESPLRGIEF-------VTRKVTDAVARIKLGK-QQELRLGNVDAKRDWGFAG 236 (335)
T ss_dssp HHHHHHHHHHHHHHH-CCCEEEEEECCEECTTSCTTS-------HHHHHHHHHHHHHTTS-CSCEEESCTTCEEECEEHH
T ss_pred HHHHHHHHHHHHHHc-CCcEEEEeeCcccCCCCCCCc-------chHHHHHHHHHHHcCC-CceEEeCCCcceeceEEHH
Confidence 999999999998877 899999999999999643211 122344333 434432 2334579999999999999
Q ss_pred Eeeeccccc
Q psy16545 225 VAIDNFVNS 233 (600)
Q Consensus 225 d~v~~~~~a 233 (600)
|+++.+..+
T Consensus 237 Dva~a~~~~ 245 (335)
T 1rpn_A 237 DYVEAMWLM 245 (335)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999876655
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-23 Score=213.29 Aligned_cols=208 Identities=17% Similarity=0.148 Sum_probs=163.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCc-ccCCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAV-GESMQE 85 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~-~~~~~~ 85 (600)
.|||++|++|+++.+ .+...+.++++++++ .+|+.|.+++.+ +++..++|+|||+|+.... .....+
T Consensus 7 lVtGatG~iG~~l~~--~L~~~g~~v~~~~r~~~~D~~d~~~~~~---------~~~~~~~d~vih~a~~~~~~~~~~~~ 75 (321)
T 1e6u_A 7 FIAGHRGMVGSAIRR--QLEQRGDVELVLRTRDELNLLDSRAVHD---------FFASERIDQVYLAAAKVGGIVANNTY 75 (321)
T ss_dssp EEETTTSHHHHHHHH--HHTTCTTEEEECCCTTTCCTTCHHHHHH---------HHHHHCCSEEEECCCCCCCHHHHHHC
T ss_pred EEECCCcHHHHHHHH--HHHhCCCeEEEEecCccCCccCHHHHHH---------HHHhcCCCEEEEcCeecCCcchhhhC
Confidence 489999999999965 444556666666654 689999998888 5543479999999997642 123356
Q ss_pred hhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCC----CCCCCC-ChHHHHHHHHHHHHHHHHhhc
Q psy16545 86 PLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDH----PTGNIK-NVYGKTKHFIEEMLKDLSKAH 160 (600)
Q Consensus 86 ~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~----~~~~p~-s~Y~~sK~~~e~~~~~~~~~~ 160 (600)
+...+++|+.++.+|+++|++.++++||++||.++||.....+++|++ +. .|. ++|+.+|+++|++++.++++.
T Consensus 76 ~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~-~p~~~~Y~~sK~~~E~~~~~~~~~~ 154 (321)
T 1e6u_A 76 PADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTL-EPTNEPYAIAKIAGIKLCESYNRQY 154 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC-CGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCC-CCCCCccHHHHHHHHHHHHHHHHHh
Confidence 778999999999999999999999999999999999977677889987 45 454 699999999999999998776
Q ss_pred CCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcC---CC-CeEEEecCCcccccCcceEEeeecccccc
Q psy16545 161 KEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIG---SK-PHFTVFGADYETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 161 ~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~v~g~g~~~~~~~~v~d~v~~~~~a~ 234 (600)
+++++++||+++|||...+.. ....+++.+.+.+.. .+ +++.++++|.+.++++|++|+++.+..++
T Consensus 155 -~~~~~ilrp~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~ 225 (321)
T 1e6u_A 155 -GRDYRSVMPTNLYGPHDNFHP------SNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVM 225 (321)
T ss_dssp -CCEEEEEEECEEESTTCCCCT------TCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHH
T ss_pred -CCCEEEEEeCCcCCcCCCCCC------CCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHH
Confidence 999999999999999753211 112456655554421 12 57888999999999999999998776553
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.5e-23 Score=211.77 Aligned_cols=231 Identities=18% Similarity=0.195 Sum_probs=175.5
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.+.+.+.++++..++|+|||+|+..... +..++. ++.|+.++.+++++|++.+++||||+||.++||
T Consensus 65 ~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~ 141 (330)
T 2pzm_A 65 AGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYG 141 (330)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGC
T ss_pred CCceEEEeeCCCHHHHHHHHhhcCCCEEEECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhC
Confidence 36889999999999999988765789999999976543 333444 899999999999999999999999999999998
Q ss_pred CCCCC--CCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCc
Q psy16545 332 EPQFL--PITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPV 408 (600)
Q Consensus 332 ~~~~~--~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~ 408 (600)
..... +++|++ .+ .+.|+.+| ..+|.+++.+ +++++++||++ +||+....+
T Consensus 142 ~~~~~~~~~~E~~--~~-~~~Y~~sK---~~~e~~~~~~----~~~~~~iR~~~v~gp~~~~~~---------------- 195 (330)
T 2pzm_A 142 RPATVPIPIDSPT--AP-FTSYGISK---TAGEAFLMMS----DVPVVSLRLANVTGPRLAIGP---------------- 195 (330)
T ss_dssp SCSSSSBCTTCCC--CC-CSHHHHHH---HHHHHHHHTC----SSCEEEEEECEEECTTCCSSH----------------
T ss_pred CCccCCCCcCCCC--CC-CChHHHHH---HHHHHHHHHc----CCCEEEEeeeeeECcCCCCCH----------------
Confidence 76544 788887 34 38999999 7788888876 88999999877 665532111
Q ss_pred ceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhh
Q psy16545 409 PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLR 488 (600)
Q Consensus 409 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 488 (600)
+..++..+. .+. ++ + +++. . +
T Consensus 196 --------------------------------------------~~~~~~~~~--~~~--~~----~--~~~~-~----~ 216 (330)
T 2pzm_A 196 --------------------------------------------IPTFYKRLK--AGQ--KC----F--CSDT-V----R 216 (330)
T ss_dssp --------------------------------------------HHHHHHHHH--TTC--CC----C--EESC-E----E
T ss_pred --------------------------------------------HHHHHHHHH--cCC--EE----e--CCCC-E----e
Confidence 001111111 122 11 1 2222 2 6
Q ss_pred hhhhhcCCCccccccCCCCCcchhHHHHHH-HhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCCC
Q psy16545 489 TFERVTGKPVPYIFYNLGTGQGTSVLQLLR-TFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE 567 (600)
Q Consensus 489 ~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~-a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~ 567 (600)
+|+| ++|+++ ++..++..+. +++||+++++.+|+.|+++.+.+.+|.+ ++.+.+.++
T Consensus 217 ~~i~--------------------~~Dva~~a~~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~ 274 (330)
T 2pzm_A 217 DFLD--------------------MSDFLAIADLSLQEGRP-TGVFNVSTGEGHSIKEVFDVVLDYVGAT-LAEPVPVVA 274 (330)
T ss_dssp CEEE--------------------HHHHHHHHHHHTSTTCC-CEEEEESCSCCEEHHHHHHHHHHHHTCC-CSSCCCEEC
T ss_pred ccee--------------------HHHHHHHHHHHHhhcCC-CCEEEeCCCCCCCHHHHHHHHHHHhCCC-CceeCCCCc
Confidence 7777 999999 9998887655 8999999999999999999999999987 555555444
Q ss_pred CCccccccChHHH-----HHHcCceeeEEEEe
Q psy16545 568 GDIVSMYANTDLA-----QRELGWSARCTVKI 594 (600)
Q Consensus 568 ~~~~~~~~d~~k~-----~~~lG~~p~~~l~~ 594 (600)
+.....+|++|+ ++ |||+|+++++.
T Consensus 275 -~~~~~~~d~~k~~~~~l~~-lG~~p~~~~~~ 304 (330)
T 2pzm_A 275 -PGADDVPSVVLDPSKTETE-FGWKAKVDFKD 304 (330)
T ss_dssp -CCTTSCSEECBCCHHHHHH-HCCCCCCCHHH
T ss_pred -chhhccCCHHHHhhchHHH-cCCcccCCHHH
Confidence 456677888888 88 99999988764
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-23 Score=215.20 Aligned_cols=208 Identities=23% Similarity=0.218 Sum_probs=163.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKA 78 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~ 78 (600)
.|||++|++|+++.+.. ...+.++++++|. .+|+.|.+++.+ ++. ++|+|||+|+...
T Consensus 23 lVtGatG~iG~~l~~~L--~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~---------~~~--~~d~vih~A~~~~ 89 (347)
T 4id9_A 23 LVTGSAGRVGRAVVAAL--RTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSD---------AIM--GVSAVLHLGAFMS 89 (347)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHH---------HHT--TCSEEEECCCCCC
T ss_pred EEECCCChHHHHHHHHH--HhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHH---------HHh--CCCEEEECCcccC
Confidence 58999999999996533 3334455555554 589999999988 776 8999999999875
Q ss_pred cccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCC--CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q psy16545 79 VGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE--PQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDL 156 (600)
Q Consensus 79 ~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~--~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~ 156 (600)
.. .......+++|+.++.+|+++|++.++++||++||.++||. ....+++|+++. .|.++|+.||+++|++++.+
T Consensus 90 ~~--~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~-~~~~~Y~~sK~~~E~~~~~~ 166 (347)
T 4id9_A 90 WA--PADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPL-CPNSPYGLTKLLGEELVRFH 166 (347)
T ss_dssp SS--GGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCC-CCCSHHHHHHHHHHHHHHHH
T ss_pred cc--hhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCC-CCCChHHHHHHHHHHHHHHH
Confidence 43 23347799999999999999999999999999999999997 566789999999 89999999999999999999
Q ss_pred HhhcCCceEEEEeccccc-------------CCCCCCCCC-CCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccC--
Q psy16545 157 SKAHKEWNIISLRYFNPV-------------GAHPSGRIG-EDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDG-- 220 (600)
Q Consensus 157 ~~~~~~~~~~ilR~~~v~-------------G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~-- 220 (600)
+++. +++++++||+++| ||+...... .........+++.+.+.+. .++++.++|+|.+.+++
T Consensus 167 ~~~~-~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~ 244 (347)
T 4id9_A 167 QRSG-AMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRD-IGEPSHILARNENGRPFRM 244 (347)
T ss_dssp HHHS-SSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHC-CSSCCEEEEECTTCCBCEE
T ss_pred HHhc-CCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHH-cCCCeEEeCCCCcccCCcc
Confidence 8887 9999999999999 663210000 0000001356676666665 55778889999999999
Q ss_pred --cceEEeeeccccc
Q psy16545 221 --TGKVVAIDNFVNS 233 (600)
Q Consensus 221 --~~v~d~v~~~~~a 233 (600)
+|++|+++.+..+
T Consensus 245 ~~i~v~Dva~ai~~~ 259 (347)
T 4id9_A 245 HITDTRDMVAGILLA 259 (347)
T ss_dssp CEEEHHHHHHHHHHH
T ss_pred CcEeHHHHHHHHHHH
Confidence 9999988876655
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-23 Score=218.36 Aligned_cols=208 Identities=15% Similarity=0.143 Sum_probs=163.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------ccccc-ChHHhhhHHhhhhcccccccCCCCEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIV-SMYANTDLAQKELGWSARCTHDIDCV 70 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~-~~~~~~~~~~~~~~~~~~~~~~~d~V 70 (600)
.|||++|++|+++.+..... .+.++++++|. .+|++ +.+.+.+ +++ ++|+|
T Consensus 28 lVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~---------~~~--~~d~V 95 (372)
T 3slg_A 28 LILGVNGFIGHHLSKRILET-TDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEY---------HVK--KCDVI 95 (372)
T ss_dssp EEESCSSHHHHHHHHHHHHH-SSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHH---------HHH--HCSEE
T ss_pred EEECCCChHHHHHHHHHHhC-CCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHH---------Hhc--cCCEE
Confidence 58999999999996532211 12333333332 67998 8888888 666 79999
Q ss_pred EEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCC------CCCCChHHH
Q psy16545 71 IHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPT------GNIKNVYGK 144 (600)
Q Consensus 71 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~------~~p~s~Y~~ 144 (600)
|||||.........++...+++|+.++.+|+++|++.+ ++||++||.++||.....+++|++++ +.|.++|+.
T Consensus 96 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~ 174 (372)
T 3slg_A 96 LPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYAC 174 (372)
T ss_dssp EECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHH
T ss_pred EEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHH
Confidence 99999887655556788899999999999999999999 89999999999998777788887643 136678999
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceE
Q psy16545 145 TKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKV 224 (600)
Q Consensus 145 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~ 224 (600)
||+++|++++.++++ +++++++||++||||+..+.++.... ...+++.+...+. .++++.++++|.+.++++|++
T Consensus 175 sK~~~E~~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~v~ 249 (372)
T 3slg_A 175 SKQLMDRVIWGYGME--GLNFTLFRPFNWIGPGLDSIYTPKEG--SSRVVTQFLGHIV-RGENISLVDGGSQKRAFTYVD 249 (372)
T ss_dssp HHHHHHHHHHHHHTT--TCEEEEEEECSEECSSCCCTTCSBSC--SCHHHHHHHHHHH-HTCCEEEGGGGCCEEECEEHH
T ss_pred HHHHHHHHHHHHHHC--CCCEEEEccccccCCCcccccccccc--cchHHHHHHHHHH-cCCCcEEeCCCceEEEEEEHH
Confidence 999999999999876 89999999999999987654432211 2456776666555 456888999999999999999
Q ss_pred Eeeeccccc
Q psy16545 225 VAIDNFVNS 233 (600)
Q Consensus 225 d~v~~~~~a 233 (600)
|+++.+..+
T Consensus 250 Dva~a~~~~ 258 (372)
T 3slg_A 250 DGISALMKI 258 (372)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999876655
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=228.03 Aligned_cols=254 Identities=16% Similarity=0.225 Sum_probs=185.3
Q ss_pred CceeEEEeecCChhh-HHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 252 KKVDFYSCDLVDKNR-LGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~-l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
.+++++.+|+.+... +.++++ ++|+|||+|+.........++...++.|+.++.+++++|++.+ +||||+||.++|
T Consensus 360 ~~v~~v~~Dl~d~~~~~~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vy 436 (660)
T 1z7e_A 360 PHFHFVEGDISIHSEWIEYHVK--KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVY 436 (660)
T ss_dssp TTEEEEECCTTTCHHHHHHHHH--HCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGG
T ss_pred CceEEEECCCCCcHHHHHHhhc--CCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHc
Confidence 468899999998765 777777 7899999999865444456788899999999999999999998 999999999999
Q ss_pred cCCCCCCCCCCCCC------CCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHh
Q psy16545 331 GEPQFLPITEDHPT------GNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVT 403 (600)
Q Consensus 331 g~~~~~~~~E~~~~------~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~ 403 (600)
|.....+++|+++. ..+.+.|+.|| ..+|.+++.+.+.++++++++||++ +|++.......
T Consensus 437 g~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK---~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~--------- 504 (660)
T 1z7e_A 437 GMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK---QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAA--------- 504 (660)
T ss_dssp BTCCSSSBCTTTCCEEECCTTCTTHHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHH---------
T ss_pred CCCCCcccCCCccccccCcccCCCCCcHHHH---HHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccc---------
Confidence 98777788898753 12236899999 8899999999888899999999988 55543210000
Q ss_pred CCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccc
Q psy16545 404 GNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSV 483 (600)
Q Consensus 404 g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 483 (600)
..++ ...+..++..+. .+.++.+. +++.+.
T Consensus 505 ----------~~~~--------------------------------~~~~~~~~~~~~--~g~~~~~~------g~g~~~ 534 (660)
T 1z7e_A 505 ----------RIGS--------------------------------SRAITQLILNLV--EGSPIKLI------DGGKQK 534 (660)
T ss_dssp ----------TTTC--------------------------------SCHHHHHHHHHH--HTCCEEEE------GGGCCE
T ss_pred ----------cccc--------------------------------cchHHHHHHHHH--cCCCcEEe------CCCCeE
Confidence 0000 000122222222 25554431 333333
Q ss_pred hhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCC---ceeEeEcCCCC-CccHHHHHHHHhhhcCCccc
Q psy16545 484 LQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV---PYIFYNLGTGQ-GTSVLQLLRTFERVTGKPVP 559 (600)
Q Consensus 484 ~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~---~~~~~nl~~~~-~~s~~e~~~~~~~~~g~~~~ 559 (600)
++|+| ++|+++++..++..+. .+++||+++++ .+|+.|+++.+.+.+|.+..
T Consensus 535 ----~~~i~--------------------v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~ 590 (660)
T 1z7e_A 535 ----RCFTD--------------------IRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPL 590 (660)
T ss_dssp ----EECEE--------------------HHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTT
T ss_pred ----EEEEE--------------------HHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCc
Confidence 88888 8899999988876543 57899999996 89999999999999986432
Q ss_pred ccccCC---------------CCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 560 YIVEAR---------------REGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 560 ~~~~~~---------------~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
....+. +..+.....+|++|++++|||+|+++++.
T Consensus 591 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~~l~e 640 (660)
T 1z7e_A 591 RHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQE 640 (660)
T ss_dssp GGGSCCCCCEEEECTHHHHCTTCCCCSCCCBCCHHHHHHHCCCCCCCHHH
T ss_pred ccccCccccccchhccccccccccchhhcccCHHHHHHhcCCCccCcHHH
Confidence 211111 11234456789999999999999988864
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=6.3e-23 Score=216.62 Aligned_cols=181 Identities=21% Similarity=0.202 Sum_probs=138.8
Q ss_pred cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCChh---hhHHhHHHHHHHHHHHHHHcCC-CeEEEe
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPL---MYYKNNLIATINLLEVMKSHGV-YQLVFS 115 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~---~~~~~Nv~gt~~ll~a~~~~~~-~r~I~~ 115 (600)
.+|++|.+++.+ +++..++|+||||||.........++. ..+++|+.|+.+|+++|++.++ ++||++
T Consensus 83 ~~Dl~d~~~~~~---------~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~ 153 (404)
T 1i24_A 83 VGDICDFEFLAE---------SFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKL 153 (404)
T ss_dssp ESCTTSHHHHHH---------HHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred ECCCCCHHHHHH---------HHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 679999988888 555335999999999875433334443 4789999999999999999887 599999
Q ss_pred cCccccCCCCCCCCCCC--------------CCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCC
Q psy16545 116 SSCTVYGEPQFLPITED--------------HPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGR 181 (600)
Q Consensus 116 SS~~vyg~~~~~~~~E~--------------~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~ 181 (600)
||.++||... .+++|+ .+. .|.++|+.||+++|++++.++.++ +++++++||++||||+..+.
T Consensus 154 SS~~vyg~~~-~~~~E~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~ivrp~~v~Gp~~~~~ 230 (404)
T 1i24_A 154 GTMGEYGTPN-IDIEEGYITITHNGRTDTLPYPK-QASSFYHLSKVHDSHNIAFTCKAW-GIRATDLNQGVVYGVKTDET 230 (404)
T ss_dssp CCGGGGCCCS-SCBCSSEEEEEETTEEEEEECCC-CCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECSCCTTG
T ss_pred CcHHHhCCCC-CCCCccccccccccccccccCCC-CCCChhHHHHHHHHHHHHHHHHhc-CCeEEEEecceeeCCCCCcc
Confidence 9999998654 467775 466 788999999999999999998877 99999999999999975321
Q ss_pred C-------CCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 182 I-------GEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 182 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
. .....+....+++.+...+. .++++.++|+|.+.|+++|++|+++++..+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~ 288 (404)
T 1i24_A 231 EMHEELRNRLDYDAVFGTALNRFCVQAA-VGHPLTVYGKGGQTRGYLDIRDTVQCVEIA 288 (404)
T ss_dssp GGSGGGCCCCCCSTTTCCHHHHHHHHHH-HTCCEEEETTSCCEEEEEEHHHHHHHHHHH
T ss_pred ccccccccccccccchhhHHHHHHHHHH-cCCeeEEeCCCCceECcEEHHHHHHHHHHH
Confidence 0 00111111345665555544 346788899999999999999999876655
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4e-23 Score=210.56 Aligned_cols=237 Identities=14% Similarity=0.111 Sum_probs=150.8
Q ss_pred EEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCC
Q psy16545 256 FYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQF 335 (600)
Q Consensus 256 ~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~ 335 (600)
++.+|+.+.+.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++.++ ||||+||.++|+. ..
T Consensus 41 ~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~ 118 (315)
T 2ydy_A 41 FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TN 118 (315)
T ss_dssp -----------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SS
T ss_pred eEEecCCCHHHHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CC
Confidence 677899999988888875568999999998655445667888999999999999999999887 9999999999998 56
Q ss_pred CCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEEee
Q psy16545 336 LPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIFYN 414 (600)
Q Consensus 336 ~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 414 (600)
.+++|+++..|. +.|+.+| ..+|.+++.+ +++++++|++. +|+++....
T Consensus 119 ~~~~E~~~~~~~-~~Y~~sK---~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~---------------------- 168 (315)
T 2ydy_A 119 PPYREEDIPAPL-NLYGKTK---LDGEKAVLEN----NLGAAVLRIPILYGEVEKLEE---------------------- 168 (315)
T ss_dssp CSBCTTSCCCCC-SHHHHHH---HHHHHHHHHH----CTTCEEEEECSEECSCSSGGG----------------------
T ss_pred CCCCCCCCCCCc-CHHHHHH---HHHHHHHHHh----CCCeEEEeeeeeeCCCCcccc----------------------
Confidence 689999987775 8999999 7789888875 57889999887 444332100
Q ss_pred CCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhhhc
Q psy16545 415 LGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVT 494 (600)
Q Consensus 415 ~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~ 494 (600)
..++ .++..+. ..+.++.+ .+++. ++|+|
T Consensus 169 ---------------------~~~~---------------~~~~~~~-~~~~~~~~------~~~~~------~~~i~-- 197 (315)
T 2ydy_A 169 ---------------------SAVT---------------VMFDKVQ-FSNKSANM------DHWQQ------RFPTH-- 197 (315)
T ss_dssp ---------------------STTG---------------GGHHHHH-CCSSCEEE------ECSSB------BCCEE--
T ss_pred ---------------------cHHH---------------HHHHHHH-hcCCCeee------ccCce------ECcEE--
Confidence 0000 0111110 01333322 12222 77777
Q ss_pred CCCccccccCCCCCcchhHHHHHHHhhhhcCC----CCceeEeEcCCCCCccHHHHHHHHhhhcCCccc-ccccCC----
Q psy16545 495 GKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK----PVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP-YIVEAR---- 565 (600)
Q Consensus 495 d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~----~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~-~~~~~~---- 565 (600)
++|+++++..++.+ ...+++||+++++.+|+.|+++.+.+.+|.+.+ +...+.
T Consensus 198 ------------------v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~ 259 (315)
T 2ydy_A 198 ------------------VKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVL 259 (315)
T ss_dssp ------------------HHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCS
T ss_pred ------------------HHHHHHHHHHHHHhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheecccccccc
Confidence 88888888877653 245789999999999999999999999997644 222221
Q ss_pred CCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 566 REGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 566 ~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
....+....+|++|++++ ||+|+++++.
T Consensus 260 ~~~~~~~~~~d~~k~~~~-G~~p~~~~~~ 287 (315)
T 2ydy_A 260 GAQRPRNAQLDCSKLETL-GIGQRTPFRI 287 (315)
T ss_dssp SSCCCSBCCBCCHHHHHT-TCCCCCCHHH
T ss_pred ccCCCcccccchHHHHhc-CCCCCCCHHH
Confidence 122345678899999997 9999998764
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.6e-23 Score=214.49 Aligned_cols=201 Identities=24% Similarity=0.231 Sum_probs=161.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------------cccccChHHhhhHHhhhhcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------------EGDIVSMYANTDLAQKELGW 59 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------------~~Dl~~~~~~~~~~~~~~~~ 59 (600)
.|||++|++|+++.+.......+.++++++|. .+|+++.+++.+
T Consensus 14 lVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-------- 85 (362)
T 3sxp_A 14 LITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR-------- 85 (362)
T ss_dssp EEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH--------
T ss_pred EEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH--------
Confidence 58999999999996533221134455555441 579999998888
Q ss_pred cccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 60 SARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 60 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
+ ...++|+||||||.... ...++...+++|+.++.+|+++|++.+++ ||++||.++||.... +++|+++. .|.
T Consensus 86 -~-~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~-~p~ 158 (362)
T 3sxp_A 86 -L-EKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNE-SPE 158 (362)
T ss_dssp -H-TTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCC-CCS
T ss_pred -h-hccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCC-CCC
Confidence 5 12389999999997643 45788899999999999999999999985 999999999997665 99999999 899
Q ss_pred ChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCccccc
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETED 219 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~ 219 (600)
++|+.||.++|++++.++.+ ++++++||+++|||+.... .....+++.+...+. .++++.++++|.+.++
T Consensus 159 ~~Y~~sK~~~E~~~~~~~~~---~~~~~lR~~~v~Gp~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~ 228 (362)
T 3sxp_A 159 NVYGFSKLCMDEFVLSHSND---NVQVGLRYFNVYGPREFYK------EKTASMVLQLALGAM-AFKEVKLFEFGEQLRD 228 (362)
T ss_dssp SHHHHHHHHHHHHHHHTTTT---SCEEEEEECSEESTTCGGG------GGGSCHHHHHHHHHH-TTSEEECSGGGCCEEE
T ss_pred ChhHHHHHHHHHHHHHHhcc---CCEEEEEeCceeCcCCCCC------CcchhHHHHHHHHHH-hCCCeEEECCCCeEEc
Confidence 99999999999999988764 7899999999999964321 111356777776666 5578888899999999
Q ss_pred CcceEEeeeccccc
Q psy16545 220 GTGKVVAIDNFVNS 233 (600)
Q Consensus 220 ~~~v~d~v~~~~~a 233 (600)
++|++|+++.+..+
T Consensus 229 ~i~v~Dva~ai~~~ 242 (362)
T 3sxp_A 229 FVYIEDVIQANVKA 242 (362)
T ss_dssp CEEHHHHHHHHHHH
T ss_pred cEEHHHHHHHHHHH
Confidence 99999999876655
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.5e-23 Score=212.58 Aligned_cols=201 Identities=17% Similarity=0.173 Sum_probs=158.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTHDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 67 (600)
.|||++|++|+++.+.....+.+.++++++|. .+|++|.+++.+ +++ ++
T Consensus 8 lVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~--~~ 76 (348)
T 1oc2_A 8 IVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDK---------LAA--KA 76 (348)
T ss_dssp EEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHH---------HHT--TC
T ss_pred EEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHH---------Hhh--cC
Confidence 58999999999996533222113344444431 469999888888 666 67
Q ss_pred CEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCC------------CCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQF------------LPITEDHPT 135 (600)
Q Consensus 68 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~------------~~~~E~~~~ 135 (600)
|+||||||......+..++...+++|+.++.+++++|.+.++ +||++||.++||.... .+++|+++.
T Consensus 77 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~ 155 (348)
T 1oc2_A 77 DAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNY 155 (348)
T ss_dssp SEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCC
T ss_pred CEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCC
Confidence 999999998754334456778999999999999999999888 9999999999986532 678999998
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCc
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADY 215 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~ 215 (600)
.|.++|+.||+++|++++.++.++ +++++++||+++|||.... ..+++.+...+. .++++.++++|.
T Consensus 156 -~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~ilrp~~v~G~~~~~----------~~~~~~~~~~~~-~~~~~~~~~~~~ 222 (348)
T 1oc2_A 156 -NPSSPYSSTKAASDLIVKAWVRSF-GVKATISNCSNNYGPYQHI----------EKFIPRQITNIL-AGIKPKLYGEGK 222 (348)
T ss_dssp -CCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEESTTCCT----------TSHHHHHHHHHH-HTCCCEEETTSC
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHh-CCCEEEEeeceeeCCCCCc----------cchHHHHHHHHH-cCCCceEecCCC
Confidence 899999999999999999998887 9999999999999996421 235565554444 335677889999
Q ss_pred ccccCcceEEeeeccccc
Q psy16545 216 ETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 216 ~~~~~~~v~d~v~~~~~a 233 (600)
+.++++|++|+++.+..+
T Consensus 223 ~~~~~i~v~Dva~~~~~~ 240 (348)
T 1oc2_A 223 NVRDWIHTNDHSTGVWAI 240 (348)
T ss_dssp CEEECEEHHHHHHHHHHH
T ss_pred ceEeeEEHHHHHHHHHHH
Confidence 999999999988766544
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.8e-23 Score=208.71 Aligned_cols=202 Identities=16% Similarity=0.137 Sum_probs=150.5
Q ss_pred CCCCcchHHHHHHHhhhccCCC-ccEEecccc--------------cccccChHHhhhHHhhhhccccccc---CCCCEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKP-VPYIVEARR--------------EGDIVSMYANTDLAQKELGWSARCT---HDIDCV 70 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~-~~~~~~~~~--------------~~Dl~~~~~~~~~~~~~~~~~~~~~---~~~d~V 70 (600)
|||++|++|+++.+. +...+ .++++++|. .+|+.+.+.+.+ +++. .++|+|
T Consensus 4 VtGatG~iG~~l~~~--L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~---------~~~~~~~~~~d~v 72 (310)
T 1eq2_A 4 VTGGAGFIGSNIVKA--LNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQ---------IMAGEEFGDVEAI 72 (310)
T ss_dssp EETTTSHHHHHHHHH--HHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHH---------HHTTCCCSSCCEE
T ss_pred EEcCccHHHHHHHHH--HHHCCCcEEEEEccCCCCchhhhcCcceeccccccHHHHHH---------HHhccccCCCcEE
Confidence 799999999999653 33334 455555543 256777776666 4442 159999
Q ss_pred EEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q psy16545 71 IHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIE 150 (600)
Q Consensus 71 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e 150 (600)
|||||.... ...++...+++|+.++.+++++|++.++ +||++||.++||.....+++|+++. .|.++|+.||.++|
T Consensus 73 i~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~-~p~~~Y~~sK~~~e 148 (310)
T 1eq2_A 73 FHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYE-KPLNVYGYSKFLFD 148 (310)
T ss_dssp EECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGC-CCSSHHHHHHHHHH
T ss_pred EECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCC-CCCChhHHHHHHHH
Confidence 999998753 4567888999999999999999999999 9999999999997766689999998 89999999999999
Q ss_pred HHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcc-cccCcceEEeeec
Q psy16545 151 EMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYE-TEDGTGKVVAIDN 229 (600)
Q Consensus 151 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~-~~~~~~v~d~v~~ 229 (600)
++++.+++++ +++++++||+++|||+..+ .+....+++.+.+.+. .++++.++++|.+ .++++|++|+++.
T Consensus 149 ~~~~~~~~~~-g~~~~~lrp~~v~G~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~i~v~Dva~~ 220 (310)
T 1eq2_A 149 EYVRQILPEA-NSQIVGFRYFNVYGPREGH------KGSMASVAFHLNTQLN-NGESPKLFEGSENFKRDFVYVGDVADV 220 (310)
T ss_dssp HHHHHHGGGC-SSCEEEEEECEEESSSCGG------GGGGSCHHHHHHHHHH-C-------------CBCEEEHHHHHHH
T ss_pred HHHHHHHHHc-CCCEEEEeCCcEECcCCCC------CCccchHHHHHHHHHH-cCCCcEEecCCCcceEccEEHHHHHHH
Confidence 9999998876 9999999999999996431 0112356776666665 4567778899999 9999999999887
Q ss_pred cccc
Q psy16545 230 FVNS 233 (600)
Q Consensus 230 ~~~a 233 (600)
+..+
T Consensus 221 ~~~~ 224 (310)
T 1eq2_A 221 NLWF 224 (310)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=7e-23 Score=206.44 Aligned_cols=192 Identities=24% Similarity=0.209 Sum_probs=156.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCChh
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPL 87 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~ 87 (600)
.|||++|++|+++.+ .+...+.++++++|+.+|++|.+++.+ +++..++|+||||||.........++.
T Consensus 16 lVtGatG~iG~~l~~--~L~~~g~~V~~~~r~~~Dl~d~~~~~~---------~~~~~~~d~vih~A~~~~~~~~~~~~~ 84 (292)
T 1vl0_A 16 LITGANGQLGREIQK--QLKGKNVEVIPTDVQDLDITNVLAVNK---------FFNEKKPNVVINCAAHTAVDKCEEQYD 84 (292)
T ss_dssp EEESTTSHHHHHHHH--HHTTSSEEEEEECTTTCCTTCHHHHHH---------HHHHHCCSEEEECCCCCCHHHHHHCHH
T ss_pred EEECCCChHHHHHHH--HHHhCCCeEEeccCccCCCCCHHHHHH---------HHHhcCCCEEEECCccCCHHHHhcCHH
Confidence 489999999999955 555567889999999999999999888 554337999999999875433446778
Q ss_pred hhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEE
Q psy16545 88 MYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIIS 167 (600)
Q Consensus 88 ~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~i 167 (600)
..+++|+.++.+++++|++.++ +||++||.++|+.....+++|+++. .|.++|+.+|.++|++++.+. .++++
T Consensus 85 ~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~-~~~~~Y~~sK~~~E~~~~~~~-----~~~~~ 157 (292)
T 1vl0_A 85 LAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEV-NPQSAYGKTKLEGENFVKALN-----PKYYI 157 (292)
T ss_dssp HHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCC-CCCSHHHHHHHHHHHHHHHHC-----SSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCC-CCccHHHHHHHHHHHHHHhhC-----CCeEE
Confidence 8999999999999999999988 9999999999997766789999999 899999999999999998864 36799
Q ss_pred EecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 168 LRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 168 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
+||+++|||. ..+++.+.+.+. .++++.+.|+ +.+++++++|+++.+..+
T Consensus 158 lR~~~v~G~~-------------~~~~~~~~~~~~-~~~~~~~~~~--~~~~~i~v~Dva~~~~~~ 207 (292)
T 1vl0_A 158 VRTAWLYGDG-------------NNFVKTMINLGK-THDELKVVHD--QVGTPTSTVDLARVVLKV 207 (292)
T ss_dssp EEECSEESSS-------------SCHHHHHHHHHH-HCSEEEEESS--CEECCEEHHHHHHHHHHH
T ss_pred EeeeeeeCCC-------------cChHHHHHHHHh-cCCcEEeecC--eeeCCccHHHHHHHHHHH
Confidence 9999999992 125565555544 3456777664 788999999988755533
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.88 E-value=9.8e-23 Score=208.03 Aligned_cols=210 Identities=23% Similarity=0.276 Sum_probs=159.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccccccc-cChHHhhhHHhhhhccccccc--CCCCEEEEcCcccCcccCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDI-VSMYANTDLAQKELGWSARCT--HDIDCVIHFAAVKAVGESMQ 84 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~~~~~~--~~~d~Vih~A~~~~~~~~~~ 84 (600)
.|||++|++|+++.+ .+...+.++++++|..... ...+.+...... ..-..+.. .++|+|||+||.........
T Consensus 11 lVtGatG~iG~~l~~--~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~d~vi~~a~~~~~~~~~~ 87 (321)
T 3vps_A 11 LITGGAGFIGGHLAR--ALVASGEEVTVLDDLRVPPMIPPEGTGKFLEK-PVLELEERDLSDVRLVYHLASHKSVPRSFK 87 (321)
T ss_dssp EEETTTSHHHHHHHH--HHHHTTCCEEEECCCSSCCSSCCTTSSEEECS-CGGGCCHHHHTTEEEEEECCCCCCHHHHTT
T ss_pred EEECCCChHHHHHHH--HHHHCCCEEEEEecCCcccccchhhhhhhccC-CCeeEEeCccccCCEEEECCccCChHHHHh
Confidence 589999999999966 3333456777667654310 000001000000 00001110 17999999999887655566
Q ss_pred ChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCc-
Q psy16545 85 EPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEW- 163 (600)
Q Consensus 85 ~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~- 163 (600)
++...++ |+.++.+++++|++.++++||++||.++||.....+++|+++. .|.++|+.||+++|++++.++.++ ++
T Consensus 88 ~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~-~p~~~Y~~sK~~~E~~~~~~~~~~-~~~ 164 (321)
T 3vps_A 88 QPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPL-SPRSPYAASKVGLEMVAGAHQRAS-VAP 164 (321)
T ss_dssp STTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCC-CCCSHHHHHHHHHHHHHHHHHHSS-SSC
T ss_pred CHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHHHHHHc-CCC
Confidence 7777888 9999999999999999999999999999998877899999999 899999999999999999999886 89
Q ss_pred eEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeecccccc
Q psy16545 164 NIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 164 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a~ 234 (600)
+++++||+++|||+... ..+++.+.+.+. .+++++++++|.+.++++|++|+++.+..++
T Consensus 165 ~~~ilRp~~v~G~~~~~----------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~ 224 (321)
T 3vps_A 165 EVGIVRFFNVYGPGERP----------DALVPRLCANLL-TRNELPVEGDGEQRRDFTYITDVVDKLVALA 224 (321)
T ss_dssp EEEEEEECEEECTTCCT----------TSHHHHHHHHHH-HHSEEEEETTSCCEECEEEHHHHHHHHHHGG
T ss_pred ceEEEEeccccCcCCCC----------CChHHHHHHHHH-cCCCeEEeCCCCceEceEEHHHHHHHHHHHH
Confidence 99999999999997442 346776666655 4568889999999999999999988766553
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.9e-22 Score=204.97 Aligned_cols=231 Identities=16% Similarity=0.165 Sum_probs=172.2
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.+.+.+.++++..++|+|||+|+..... +..++. ++.|+.++.+++++|++.+++||||+||.++||
T Consensus 66 ~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g 142 (333)
T 2q1w_A 66 PNLTFVEGSIADHALVNQLIGDLQPDAVVHTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYG 142 (333)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGC
T ss_pred CCceEEEEeCCCHHHHHHHHhccCCcEEEECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhC
Confidence 36889999999999999998844499999999976543 333444 899999999999999999999999999999998
Q ss_pred ----CCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHH-HHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCC
Q psy16545 332 ----EPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRT-FERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGN 405 (600)
Q Consensus 332 ----~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~-~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~ 405 (600)
.... +++|++ .|..+.|+.+| ..+|.+++. +. +++++||++ +|+++...+
T Consensus 143 ~~~~~~~~-~~~E~~--~p~~~~Y~~sK---~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~~~~------------- 198 (333)
T 2q1w_A 143 VKPIQQPV-RLDHPR--NPANSSYAISK---SANEDYLEYSGL-----DFVTFRLANVVGPRNVSGP------------- 198 (333)
T ss_dssp SCCCSSSB-CTTSCC--CCTTCHHHHHH---HHHHHHHHHHTC-----CEEEEEESEEESTTCCSSH-------------
T ss_pred CCcccCCC-CcCCCC--CCCCCchHHHH---HHHHHHHHhhhC-----CeEEEeeceEECcCCcCcH-------------
Confidence 5555 788887 33227899999 778888887 54 789999876 665421111
Q ss_pred CCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchh
Q psy16545 406 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQ 485 (600)
Q Consensus 406 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 485 (600)
+..++..+. .+. ++ + + +.+.
T Consensus 199 -----------------------------------------------~~~~~~~~~--~~~--~~----~--~-~~~~-- 218 (333)
T 2q1w_A 199 -----------------------------------------------LPIFFQRLS--EGK--KC----F--V-TKAR-- 218 (333)
T ss_dssp -----------------------------------------------HHHHHHHHH--TTC--CC----E--E-EECE--
T ss_pred -----------------------------------------------HHHHHHHHH--cCC--ee----e--C-CCce--
Confidence 011111111 122 11 0 2 2222
Q ss_pred hhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCC
Q psy16545 486 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEAR 565 (600)
Q Consensus 486 ~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 565 (600)
++|+| ++|+++++..++..+. +++||+++++.+|+.|+++.+++.+|.+ ++.+.+.
T Consensus 219 --~~~i~--------------------v~Dva~ai~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~ 274 (333)
T 2q1w_A 219 --RDFVF--------------------VKDLARATVRAVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALP-SYPEPEI 274 (333)
T ss_dssp --ECEEE--------------------HHHHHHHHHHHHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTCS-SCCCCEE
T ss_pred --EeeEE--------------------HHHHHHHHHHHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCCC-CceeCCC
Confidence 77777 9999999999887765 8999999999999999999999999987 5544443
Q ss_pred CCC----CccccccChHHHHHHcCceeeEEEEe
Q psy16545 566 REG----DIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 566 ~~~----~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+.. ......+|++|+++. ||+|+++++.
T Consensus 275 ~~~~~~~~~~~~~~d~~k~~~~-G~~p~~~~~~ 306 (333)
T 2q1w_A 275 RELGPDDAPSILLDPSRTIQDF-GKIEFTPLKE 306 (333)
T ss_dssp EECCTTSCCCCCBCCHHHHHHH-CCCCCCCHHH
T ss_pred CCcccccccccccCCHHHHHhc-CCCcCCCHHH
Confidence 221 115678899999998 9999988764
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.4e-23 Score=206.05 Aligned_cols=218 Identities=14% Similarity=0.135 Sum_probs=165.7
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHH--cCCCEEEEecCcc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKS--HGVYQLVFSSSCT 328 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~--~~~~r~v~~SS~~ 328 (600)
..+++++.+|+.+.+ +. ++|+|||+|+..... ++ .+.+++++|++ .+++||||+||.+
T Consensus 46 ~~~~~~~~~D~~d~~-----~~--~~d~vi~~a~~~~~~----~~---------~~~~l~~a~~~~~~~~~~~v~~Ss~~ 105 (286)
T 3ius_A 46 ASGAEPLLWPGEEPS-----LD--GVTHLLISTAPDSGG----DP---------VLAALGDQIAARAAQFRWVGYLSTTA 105 (286)
T ss_dssp HTTEEEEESSSSCCC-----CT--TCCEEEECCCCBTTB----CH---------HHHHHHHHHHHTGGGCSEEEEEEEGG
T ss_pred hCCCeEEEecccccc-----cC--CCCEEEECCCccccc----cH---------HHHHHHHHHHhhcCCceEEEEeecce
Confidence 357899999999854 44 799999999875432 11 25789999998 6789999999999
Q ss_pred cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCC
Q psy16545 329 VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKP 407 (600)
Q Consensus 329 vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~ 407 (600)
+||.....+++|+++..|. ++|+.+| ..+|.+++.+ .+++++++||++ +|++++..
T Consensus 106 vyg~~~~~~~~E~~~~~p~-~~Y~~sK---~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~---------------- 162 (286)
T 3ius_A 106 VYGDHDGAWVDETTPLTPT-AARGRWR---VMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPF---------------- 162 (286)
T ss_dssp GGCCCTTCEECTTSCCCCC-SHHHHHH---HHHHHHHHHS---TTCCEEEEEECEEEBTTBSSS----------------
T ss_pred ecCCCCCCCcCCCCCCCCC-CHHHHHH---HHHHHHHHhh---cCCCEEEEeccceECCCchHH----------------
Confidence 9998888889999998886 8999999 7889999887 699999999887 44432110
Q ss_pred cceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhh
Q psy16545 408 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLL 487 (600)
Q Consensus 408 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 487 (600)
..+ ..+.+.++. .++ +.
T Consensus 163 -------------------------------~~~---------------------~~~~~~~~~-----~~~--~~---- 179 (286)
T 3ius_A 163 -------------------------------SKL---------------------GKGGIRRII-----KPG--QV---- 179 (286)
T ss_dssp -------------------------------TTS---------------------SSSCCCEEE-----CTT--CC----
T ss_pred -------------------------------HHH---------------------hcCCccccC-----CCC--cc----
Confidence 000 013333331 122 22
Q ss_pred hhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccc--cCC
Q psy16545 488 RTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIV--EAR 565 (600)
Q Consensus 488 ~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~--~~~ 565 (600)
++|+| ++|+++++..++.++..+++||+++++.+|+.|+++.+++.+|.+.+... .+.
T Consensus 180 ~~~i~--------------------v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 239 (286)
T 3ius_A 180 FSRIH--------------------VEDIAQVLAASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKA 239 (286)
T ss_dssp BCEEE--------------------HHHHHHHHHHHHHSCCTTCEEEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGGGS
T ss_pred cceEE--------------------HHHHHHHHHHHHhCCCCCCEEEEeCCCCccHHHHHHHHHHHcCCCCCcccchhhh
Confidence 78888 99999999999987767889999999999999999999999998655432 121
Q ss_pred CCCC------ccccccChHHHHHHcCceeeE-EEEe
Q psy16545 566 REGD------IVSMYANTDLAQRELGWSARC-TVKI 594 (600)
Q Consensus 566 ~~~~------~~~~~~d~~k~~~~lG~~p~~-~l~~ 594 (600)
+..+ .....+|++|++++|||+|++ +++.
T Consensus 240 ~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e 275 (286)
T 3ius_A 240 DLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRV 275 (286)
T ss_dssp CCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHH
T ss_pred ccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHH
Confidence 1221 245678999999999999998 6764
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.5e-23 Score=212.34 Aligned_cols=206 Identities=21% Similarity=0.239 Sum_probs=155.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTHD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~ 66 (600)
.|||++|++|+++.+... ..+.++++++|. .+|++|.+++.+ +++..+
T Consensus 5 lVTGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~---------~~~~~~ 73 (347)
T 1orr_A 5 LITGGCGFLGSNLASFAL--SQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTR---------LITKYM 73 (347)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHH---------HHHHHC
T ss_pred EEeCCCchhHHHHHHHHH--hCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHH---------HHhccC
Confidence 389999999999965322 223333333321 579999988888 555234
Q ss_pred CCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCC-eEEEecCccccCCCCCC----------------CC
Q psy16545 67 IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY-QLVFSSSCTVYGEPQFL----------------PI 129 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~-r~I~~SS~~vyg~~~~~----------------~~ 129 (600)
+|+||||||.........++...+++|+.++.+|+++|++.+++ +||++||.++||..... ++
T Consensus 74 ~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~ 153 (347)
T 1orr_A 74 PDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGY 153 (347)
T ss_dssp CSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCB
T ss_pred CCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCc
Confidence 99999999986543344577889999999999999999998885 99999999999865432 36
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHH-hhcCCC---
Q psy16545 130 TEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQ-VAIGSK--- 205 (600)
Q Consensus 130 ~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--- 205 (600)
+|+.+. .|.++|+.||+++|++++.++.++ +++++++||++||||...... ...+++.+.. ...+..
T Consensus 154 ~e~~~~-~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilrp~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 224 (347)
T 1orr_A 154 DESTQL-DFHSPYGCSKGAADQYMLDYARIF-GLNTVVFRHSSMYGGRQFATY-------DQGWVGWFCQKAVEIKNGIN 224 (347)
T ss_dssp CTTSCC-CCCHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTCCCBT-------TBCHHHHHHHHHHHHHTTCC
T ss_pred cccCCC-CCCCchHHHHHHHHHHHHHHHHHh-CCcEEEEccCceeCcCCCCCC-------cCcHHHHHHHHHHhCcccCC
Confidence 777788 788999999999999999998887 999999999999999743211 1224444433 333210
Q ss_pred CeEEEecCCcccccCcceEEeeeccccc
Q psy16545 206 PHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 206 ~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
.++.++|+|.+.+++++++|+++.+..+
T Consensus 225 ~~~~~~g~g~~~~~~i~v~Dva~a~~~~ 252 (347)
T 1orr_A 225 KPFTISGNGKQVRDVLHAEDMISLYFTA 252 (347)
T ss_dssp CCEEEESSSCCEEECEEHHHHHHHHHHH
T ss_pred CCeEEecCCcceEeeEEHHHHHHHHHHH
Confidence 1677899999999999999998866644
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-22 Score=205.40 Aligned_cols=191 Identities=20% Similarity=0.151 Sum_probs=157.2
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccccc----ccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARRE----GDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQ 84 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~----~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~ 84 (600)
|||++|++|+++.+ .+. .+.++++++|.. +|+.|.+++.+ +++..++|+|||+||.........
T Consensus 5 VtGatG~iG~~l~~--~L~-~g~~V~~~~r~~~~~~~D~~d~~~~~~---------~~~~~~~d~vih~a~~~~~~~~~~ 72 (299)
T 1n2s_A 5 LFGKTGQVGWELQR--SLA-PVGNLIALDVHSKEFCGDFSNPKGVAE---------TVRKLRPDVIVNAAAHTAVDKAES 72 (299)
T ss_dssp EECTTSHHHHHHHH--HTT-TTSEEEEECTTCSSSCCCTTCHHHHHH---------HHHHHCCSEEEECCCCCCHHHHTT
T ss_pred EECCCCHHHHHHHH--Hhh-cCCeEEEeccccccccccCCCHHHHHH---------HHHhcCCCEEEECcccCCHhhhhc
Confidence 79999999999966 444 467888888876 99999998888 555335999999999876544567
Q ss_pred ChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCce
Q psy16545 85 EPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWN 164 (600)
Q Consensus 85 ~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~ 164 (600)
++...+++|+.++.+++++|++.++ |||++||.++||.....+++|+++. .|.++|+.+|.++|++++.++ .+
T Consensus 73 ~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~-~p~~~Y~~sK~~~E~~~~~~~-----~~ 145 (299)
T 1n2s_A 73 EPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDAT-SPLNVYGKTKLAGEKALQDNC-----PK 145 (299)
T ss_dssp CHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCC-CCSSHHHHHHHHHHHHHHHHC-----SS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCC-CCccHHHHHHHHHHHHHHHhC-----CC
Confidence 7888999999999999999999887 8999999999998777789999999 899999999999999998864 37
Q ss_pred EEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 165 IISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 165 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
++++||+++|||... ++++.+.+.+. .++++.+.|+ +.++++|++|+++.+..+
T Consensus 146 ~~ilRp~~v~G~~~~------------~~~~~~~~~~~-~~~~~~~~~~--~~~~~i~v~Dva~~~~~~ 199 (299)
T 1n2s_A 146 HLIFRTSWVYAGKGN------------NFAKTMLRLAK-ERQTLSVIND--QYGAPTGAELLADCTAHA 199 (299)
T ss_dssp EEEEEECSEECSSSC------------CHHHHHHHHHH-HCSEEEEECS--CEECCEEHHHHHHHHHHH
T ss_pred eEEEeeeeecCCCcC------------cHHHHHHHHHh-cCCCEEeecC--cccCCeeHHHHHHHHHHH
Confidence 899999999999631 35665655554 3457777765 789999999988766544
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.5e-23 Score=213.70 Aligned_cols=202 Identities=17% Similarity=0.145 Sum_probs=157.6
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccCCC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTHDI 67 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 67 (600)
|||++|++|+++.+..... .+.++++++|. .+|++|.+++.+ +++..++
T Consensus 5 VTGasG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~~~~~ 74 (361)
T 1kew_A 5 ITGGAGFIGSAVVRHIIKN-TQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITR---------IFEQYQP 74 (361)
T ss_dssp EESTTSHHHHHHHHHHHHH-CSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHH---------HHHHHCC
T ss_pred EECCCchHhHHHHHHHHhc-CCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHH---------HHhhcCC
Confidence 8999999999996532221 12333333321 579999988888 5543479
Q ss_pred CEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc--CCC-------eEEEecCccccCCCCC--C--------C
Q psy16545 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH--GVY-------QLVFSSSCTVYGEPQF--L--------P 128 (600)
Q Consensus 68 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~-------r~I~~SS~~vyg~~~~--~--------~ 128 (600)
|+||||||......+..++...+++|+.|+.+|+++|.+. +++ +||++||.++||.... . +
T Consensus 75 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~ 154 (361)
T 1kew_A 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPL 154 (361)
T ss_dssp SEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCC
T ss_pred CEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCC
Confidence 9999999987543344567789999999999999999998 877 9999999999986431 1 7
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeE
Q psy16545 129 ITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHF 208 (600)
Q Consensus 129 ~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (600)
++|+++. .|.++|+.||.++|.+++.++.++ +++++++||++||||.... ..+++.+.+.+. .++++
T Consensus 155 ~~E~~~~-~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~~vrp~~v~G~~~~~----------~~~~~~~~~~~~-~~~~~ 221 (361)
T 1kew_A 155 FTETTAY-APSSPYSASKASSDHLVRAWRRTY-GLPTIVTNCSNNYGPYHFP----------EKLIPLVILNAL-EGKPL 221 (361)
T ss_dssp BCTTSCC-CCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEESTTCCT----------TSHHHHHHHHHH-HTCCE
T ss_pred CCCCCCC-CCCCccHHHHHHHHHHHHHHHHHh-CCcEEEEeeceeECCCCCc----------ccHHHHHHHHHH-cCCCc
Confidence 8999998 899999999999999999998887 9999999999999996421 235565555444 34578
Q ss_pred EEecCCcccccCcceEEeeeccccc
Q psy16545 209 TVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 209 ~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
+++++|.+.++++|++|+++.+..+
T Consensus 222 ~~~~~~~~~~~~i~v~Dva~a~~~~ 246 (361)
T 1kew_A 222 PIYGKGDQIRDWLYVEDHARALHMV 246 (361)
T ss_dssp EEETTSCCEEEEEEHHHHHHHHHHH
T ss_pred eEcCCCceeEeeEEHHHHHHHHHHH
Confidence 8889999999999999988866544
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.8e-23 Score=208.45 Aligned_cols=208 Identities=15% Similarity=0.095 Sum_probs=159.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------cccccChHHhhhHHhhhhcccccccCCCCEEEEcC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFA 74 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A 74 (600)
.|||++|++|+++.+.......+.++++++|+ .+|+.|.+++.+ +++..++|+|||||
T Consensus 6 lVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~---------~~~~~~~d~vih~a 76 (312)
T 2yy7_A 6 LIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEH---------LVEVHKITDIYLMA 76 (312)
T ss_dssp EEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHHSSCEEECCTTCHHHHHH---------HHHHTTCCEEEECC
T ss_pred EEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccCCCceEEecCCCHHHHHH---------HHhhcCCCEEEECC
Confidence 48999999999996532211012334433332 589999998888 55444799999999
Q ss_pred cccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCC-CCCCCCCCCCCCCCChHHHHHHHHHHHH
Q psy16545 75 AVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQ-FLPITEDHPTGNIKNVYGKTKHFIEEML 153 (600)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~-~~~~~E~~~~~~p~s~Y~~sK~~~e~~~ 153 (600)
|.... ....++...+++|+.++.+|+++|++.++++||++||.++|+... ..+++|+.+. .|.++|+.||+++|+++
T Consensus 77 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~-~~~~~Y~~sK~~~e~~~ 154 (312)
T 2yy7_A 77 ALLSA-TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIM-EPSTVYGISKQAGERWC 154 (312)
T ss_dssp CCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBC-CCCSHHHHHHHHHHHHH
T ss_pred ccCCC-chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcC-CCCchhHHHHHHHHHHH
Confidence 97643 223567789999999999999999999999999999999998643 3578898888 89999999999999999
Q ss_pred HHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 154 KDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 154 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
+.++.++ +++++++||+++|||...+.- ...+.+.+.+.+.+.+ +++.++++|.+.++++|++|+++.+..+
T Consensus 155 ~~~~~~~-~~~~~~lrp~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 226 (312)
T 2yy7_A 155 EYYHNIY-GVDVRSIRYPGLISWSTPPGG-----GTTDYAVDIFYKAIAD--KKYECFLSSETKMPMMYMDDAIDATINI 226 (312)
T ss_dssp HHHHHHH-CCEEECEEECEEECSSSCCCS-----CTTTHHHHHHHHHHHT--SEEEESSCTTCCEEEEEHHHHHHHHHHH
T ss_pred HHHHHhc-CCcEEEEeCCeEecCCCCCCC-----chhhhHHHHHHHHHcC--CCeEEecCCCceeeeeeHHHHHHHHHHH
Confidence 9998877 999999999999998632210 0112356666665543 3567789999999999999998876655
Q ss_pred c
Q psy16545 234 V 234 (600)
Q Consensus 234 ~ 234 (600)
+
T Consensus 227 ~ 227 (312)
T 2yy7_A 227 M 227 (312)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-22 Score=208.81 Aligned_cols=207 Identities=17% Similarity=0.096 Sum_probs=159.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------------cccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------------EGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------------~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
.|||++|++|+++.+... ..+.++++++|+ .+|++|.+++.+ +
T Consensus 5 lVtGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~ 73 (372)
T 1db3_A 5 LITGVTGQDGSYLAEFLL--EKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTR---------I 73 (372)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEECC---------------------CCEEECCCCSSCHHHHHH---------H
T ss_pred EEECCCChHHHHHHHHHH--HCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHH---------H
Confidence 389999999999965322 112233332221 579999888888 5
Q ss_pred cccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCC---CeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV---YQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 62 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~---~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
++..++|+||||||.........++...+++|+.++.+++++|++.++ ++||++||.++||.....+++|+++. .|
T Consensus 74 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~-~~ 152 (372)
T 1db3_A 74 LREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPF-YP 152 (372)
T ss_dssp HHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCC-CC
T ss_pred HHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCC-CC
Confidence 543368999999998765555677888999999999999999999887 79999999999997766789999999 89
Q ss_pred CChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccc
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETE 218 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~ 218 (600)
.++|+.||.++|++++.++.++ +++++++|++++|||.....+ ...+++.+...+.....+..++|+|.+.+
T Consensus 153 ~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~r~~~~~gp~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 224 (372)
T 1db3_A 153 RSPYAVAKLYAYWITVNYRESY-GMYACNGILFNHESPRRGETF-------VTRKITRAIANIAQGLESCLYLGNMDSLR 224 (372)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECTTSCTTS-------HHHHHHHHHHHHHTTSCCCEEESCTTCEE
T ss_pred CChHHHHHHHHHHHHHHHHHHh-CCCeEEEEECCccCCCCCCcc-------hhhHHHHHHHHHHcCCCCceeecCCCcee
Confidence 9999999999999999998887 899999999999999643211 12334444433332223344579999999
Q ss_pred cCcceEEeeecccccc
Q psy16545 219 DGTGKVVAIDNFVNSV 234 (600)
Q Consensus 219 ~~~~v~d~v~~~~~a~ 234 (600)
+++|++|+++.+..++
T Consensus 225 ~~i~v~Dva~a~~~~~ 240 (372)
T 1db3_A 225 DWGHAKDYVKMQWMML 240 (372)
T ss_dssp CCEEHHHHHHHHHHTT
T ss_pred eeeEHHHHHHHHHHHH
Confidence 9999999998777654
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-22 Score=213.07 Aligned_cols=211 Identities=19% Similarity=0.152 Sum_probs=150.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCC-ccEEecccc-----------------cccccChHHhhhHHhhhhcccccccCCCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKP-VPYIVEARR-----------------EGDIVSMYANTDLAQKELGWSARCTHDIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~-~~~~~~~~~-----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~ 69 (600)
.|||++|++|+++.+... ..+ .++++++|. .+|+.|.+++.+ +++ ++|+
T Consensus 36 lVtGatG~iG~~l~~~L~--~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~---------~~~--~~d~ 102 (377)
T 2q1s_A 36 MVVGGAGFVGSNLVKRLL--ELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLAS---------LQD--EYDY 102 (377)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHH---------CCS--CCSE
T ss_pred EEECCccHHHHHHHHHHH--HcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHH---------Hhh--CCCE
Confidence 689999999999965322 222 333333332 578999888888 776 8999
Q ss_pred EEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc-CCCeEEEecCccccCCCCCCCCC--CCC---CCCCCCChHH
Q psy16545 70 VIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTVYGEPQFLPIT--EDH---PTGNIKNVYG 143 (600)
Q Consensus 70 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~r~I~~SS~~vyg~~~~~~~~--E~~---~~~~p~s~Y~ 143 (600)
||||||......+..++...+++|+.++.+|+++|++. ++++||++||.++||.....+++ |++ +...|.++|+
T Consensus 103 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~ 182 (377)
T 2q1s_A 103 VFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYS 182 (377)
T ss_dssp EEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHH
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchH
Confidence 99999987544344577889999999999999999998 89999999999999976656778 887 3213678999
Q ss_pred HHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCC---CCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccC
Q psy16545 144 KTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSG---RIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDG 220 (600)
Q Consensus 144 ~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~ 220 (600)
.+|+++|++++.++.+. +++++++||+++|||...+ .|.....+....+++.+.+.+. .++++.++++|.+.+++
T Consensus 183 ~sK~~~E~~~~~~~~~~-gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~g~g~~~~~~ 260 (377)
T 2q1s_A 183 MSKIFGEFYSVYYHKQH-QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKAL-KGMPLPLENGGVATRDF 260 (377)
T ss_dssp HHHHHHHHHHHHHHHHH-CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHH-TTCCCCCSGGGCCEECC
T ss_pred HHHHHHHHHHHHHHHHh-CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHH-cCCCeEEeCCCCeEEee
Confidence 99999999999998876 9999999999999997521 1100110001346676666555 44567778999999999
Q ss_pred cceEEeeec-cccc
Q psy16545 221 TGKVVAIDN-FVNS 233 (600)
Q Consensus 221 ~~v~d~v~~-~~~a 233 (600)
+|++|+++. +..+
T Consensus 261 i~v~Dva~a~i~~~ 274 (377)
T 2q1s_A 261 IFVEDVANGLIACA 274 (377)
T ss_dssp EEHHHHHHHHHHHH
T ss_pred EEHHHHHHHHHHHH
Confidence 999998886 5544
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-22 Score=209.08 Aligned_cols=203 Identities=17% Similarity=0.153 Sum_probs=156.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTHDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 67 (600)
.|||++|++|+++.+.... .+.++++++|. .+|+.+.+++.+ +++..++
T Consensus 13 lVtGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~~~~~ 81 (357)
T 1rkx_A 13 FVTGHTGFKGGWLSLWLQT--MGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLE---------SIREFQP 81 (357)
T ss_dssp EEETTTSHHHHHHHHHHHH--TTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHH---------HHHHHCC
T ss_pred EEECCCchHHHHHHHHHHh--CCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHH---------HHHhcCC
Confidence 6899999999999653321 22233333322 579999988888 5543359
Q ss_pred CEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcC-CCeEEEecCccccCCCCC-CCCCCCCCCCCCCChHHHH
Q psy16545 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVYGEPQF-LPITEDHPTGNIKNVYGKT 145 (600)
Q Consensus 68 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~r~I~~SS~~vyg~~~~-~~~~E~~~~~~p~s~Y~~s 145 (600)
|+||||||.........++...+++|+.++.+|+++|.+.+ +++||++||.++||.... .+++|+++. .|.++|+.|
T Consensus 82 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~-~~~~~Y~~s 160 (357)
T 1rkx_A 82 EIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAM-GGYDPYSNS 160 (357)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCB-CCSSHHHHH
T ss_pred CEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCC-CCCCccHHH
Confidence 99999999754333456777899999999999999999886 889999999999987543 478898888 889999999
Q ss_pred HHHHHHHHHHHHhhcC--------CceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCccc
Q psy16545 146 KHFIEEMLKDLSKAHK--------EWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYET 217 (600)
Q Consensus 146 K~~~e~~~~~~~~~~~--------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~ 217 (600)
|.++|++++.++.++. +++++++||++||||+... ...+++.+.+.+. .++++.+ +++.+.
T Consensus 161 K~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~---------~~~~~~~~~~~~~-~g~~~~~-~~~~~~ 229 (357)
T 1rkx_A 161 KGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA---------LDRIVPDILRAFE-QSQPVII-RNPHAI 229 (357)
T ss_dssp HHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC---------SSCHHHHHHHHHH-TTCCEEC-SCTTCE
T ss_pred HHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCc---------cccHHHHHHHHHh-cCCCEEE-CCCCCe
Confidence 9999999999876542 8999999999999996321 1346777766665 4456654 568899
Q ss_pred ccCcceEEeeeccccc
Q psy16545 218 EDGTGKVVAIDNFVNS 233 (600)
Q Consensus 218 ~~~~~v~d~v~~~~~a 233 (600)
++++|++|+++.+..+
T Consensus 230 ~~~v~v~Dva~a~~~~ 245 (357)
T 1rkx_A 230 RPWQHVLEPLSGYLLL 245 (357)
T ss_dssp ECCEETHHHHHHHHHH
T ss_pred eccEeHHHHHHHHHHH
Confidence 9999999988866644
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-22 Score=208.12 Aligned_cols=203 Identities=16% Similarity=0.129 Sum_probs=159.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCC-ccEEecccc--------------cccccChHHhhhHHhhhhccccccc---CCCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKP-VPYIVEARR--------------EGDIVSMYANTDLAQKELGWSARCT---HDIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~-~~~~~~~~~--------------~~Dl~~~~~~~~~~~~~~~~~~~~~---~~~d~ 69 (600)
.|||++|++|+++.+... ..+ .++++++|. .+|+.+.+.+.+ +++. .++|+
T Consensus 50 lVtGatG~iG~~l~~~L~--~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~---------~~~~~~~~~~d~ 118 (357)
T 2x6t_A 50 IVTGGAGFIGSNIVKALN--DKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQ---------IMAGEEFGDVEA 118 (357)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHH---------HHTTCCCSSCCE
T ss_pred EEECCCcHHHHHHHHHHH--HCCCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHH---------HHhhcccCCCCE
Confidence 589999999999966332 223 445544443 256777777766 4432 16999
Q ss_pred EEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q psy16545 70 VIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFI 149 (600)
Q Consensus 70 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~ 149 (600)
|||+||.... ...++...+++|+.++.+|+++|++.++ +||++||.++||.....+++|+++. .|.++|+.||.++
T Consensus 119 Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~-~p~~~Y~~sK~~~ 194 (357)
T 2x6t_A 119 IFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYE-KPLNVFGYSKFLF 194 (357)
T ss_dssp EEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGC-CCSSHHHHHHHHH
T ss_pred EEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCC-CCCChhHHHHHHH
Confidence 9999998653 3467788999999999999999999998 9999999999997766789999998 8999999999999
Q ss_pred HHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcc-cccCcceEEeee
Q psy16545 150 EEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYE-TEDGTGKVVAID 228 (600)
Q Consensus 150 e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~-~~~~~~v~d~v~ 228 (600)
|++++.++.+. +++++++||++||||+... .+....+++.+.+.+. .++++.++++|.+ .+++++++|+++
T Consensus 195 E~~~~~~~~~~-g~~~~ilRp~~v~Gp~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~ 266 (357)
T 2x6t_A 195 DEYVRQILPEA-NSQIVGFRYFNVYGPREGH------KGSMASVAFHLNTQLN-NGESPKLFEGSENFKRDFVYVGDVAD 266 (357)
T ss_dssp HHHHHHHGGGC-SSCEEEEEECEEESSSCTT------CGGGSCHHHHHHHHHH-TTCCCEEETTGGGCEECEEEHHHHHH
T ss_pred HHHHHHHHHHc-CCCEEEEecCeEECCCCCC------CcccchHHHHHHHHHH-cCCCcEEeCCCCcceEccEEHHHHHH
Confidence 99999998876 8999999999999996432 1112346676666555 4456778899999 999999999887
Q ss_pred ccccc
Q psy16545 229 NFVNS 233 (600)
Q Consensus 229 ~~~~a 233 (600)
.+..+
T Consensus 267 ai~~~ 271 (357)
T 2x6t_A 267 VNLWF 271 (357)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65544
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=203.40 Aligned_cols=247 Identities=13% Similarity=0.120 Sum_probs=179.7
Q ss_pred CceeEEEeecCChhhHHHHhhcCC-ccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc--CCCEEE------
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHD-IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLV------ 322 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~-~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~r~v------ 322 (600)
.+++++.+|+.+.+.+.++++..+ +|+|||+|+... .++...++.|+.++.+++++|++. +++|||
T Consensus 48 ~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~ 122 (364)
T 2v6g_A 48 NPINYVQCDISDPDDSQAKLSPLTDVTHVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRK 122 (364)
T ss_dssp SCCEEEECCTTSHHHHHHHHTTCTTCCEEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTH
T ss_pred CceEEEEeecCCHHHHHHHHhcCCCCCEEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCce
Confidence 468899999999999999998443 999999999752 467889999999999999999998 789998
Q ss_pred -EecCcccccCC--CCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhC-CCCeeEeecc-cCCCCcchHHHHHH
Q psy16545 323 -FSSSCTVYGEP--QFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTG-NKPVPYIFYN-LGTGQGTSVLQLLR 397 (600)
Q Consensus 323 -~~SS~~vYg~~--~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~-~~~~~~r~~~-~g~~~~~~~~~~~~ 397 (600)
|+||.++||.. ...+++|+++..|..+.|. .+|.+++.+.+.++ ++++++||+. +|+++......+..
T Consensus 123 i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y~-------~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~ 195 (364)
T 2v6g_A 123 HYMGPFESYGKIESHDPPYTEDLPRLKYMNFYY-------DLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGT 195 (364)
T ss_dssp HHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHHH-------HHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHH
T ss_pred EEEechhhccccccCCCCCCccccCCccchhhH-------HHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHH
Confidence 89999999975 3467899988766446662 26889998887776 9999999987 55443210000000
Q ss_pred HHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCC
Q psy16545 398 TFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGT 477 (600)
Q Consensus 398 ~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (600)
..++..+....+.++++ .
T Consensus 196 --------------------------------------------------------~~~~~~~~~~~g~~~~~------~ 213 (364)
T 2v6g_A 196 --------------------------------------------------------LCVYAAICKHEGKVLRF------T 213 (364)
T ss_dssp --------------------------------------------------------HHHHHHHHHHHTCCBCC------C
T ss_pred --------------------------------------------------------HHHHHHHHHhcCCceec------C
Confidence 00122221123555543 1
Q ss_pred CCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCC-ceeEeEcCCCCCccHHHHHHHHhhhcCC
Q psy16545 478 GQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV-PYIFYNLGTGQGTSVLQLLRTFERVTGK 556 (600)
Q Consensus 478 g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~-~~~~~nl~~~~~~s~~e~~~~~~~~~g~ 556 (600)
+++.+. ++|+++.| ++|+++++..++.++. .+++||+++++.+|+.|+++.+++.+|.
T Consensus 214 g~~~~~----~~~~~~~~-----------------v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~ 272 (364)
T 2v6g_A 214 GCKAAW----DGYSDCSD-----------------ADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGV 272 (364)
T ss_dssp SCHHHH----HSCBCCEE-----------------HHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTC
T ss_pred CCcccc----cccCCCCc-----------------HHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCC
Confidence 444433 66777553 8999999999887653 5789999999999999999999999997
Q ss_pred ccccc--ccCCC----------------------CC---Cc-----------cc-cccChHHHHHHcCceeeEEEEe
Q psy16545 557 PVPYI--VEARR----------------------EG---DI-----------VS-MYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 557 ~~~~~--~~~~~----------------------~~---~~-----------~~-~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+.... ..|.. +. .. .. ..+|++|+++ |||+|.++++.
T Consensus 273 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e 348 (364)
T 2v6g_A 273 ECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKE-HGFLGFRNSKN 348 (364)
T ss_dssp CBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHH-TTCCCCCCHHH
T ss_pred CCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCccccccccccchhhhccccchhhcchHHHHh-cCCCCCCCHHH
Confidence 65433 22221 11 11 23 5789999998 99999988764
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-22 Score=209.70 Aligned_cols=205 Identities=18% Similarity=0.185 Sum_probs=156.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIH 72 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih 72 (600)
.|||++|++|+++.+... ..+.++++++|. .+|+.|.+++.+ +++ ++|+|||
T Consensus 33 lVtGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~---------~~~--~~d~Vih 99 (379)
T 2c5a_A 33 SITGAGGFIASHIARRLK--HEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLK---------VTE--GVDHVFN 99 (379)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHH---------HHT--TCSEEEE
T ss_pred EEECCccHHHHHHHHHHH--HCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHH---------HhC--CCCEEEE
Confidence 589999999999965322 222333333332 589999988888 665 8999999
Q ss_pred cCcccCccc-CCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCC-----CCCCCCC--CCCCCCChHHH
Q psy16545 73 FAAVKAVGE-SMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQF-----LPITEDH--PTGNIKNVYGK 144 (600)
Q Consensus 73 ~A~~~~~~~-~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~-----~~~~E~~--~~~~p~s~Y~~ 144 (600)
||+...... ...++...+++|+.++.+++++|++.++++||++||.++|+.... .+++|++ +. .|.++|+.
T Consensus 100 ~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~-~~~~~Y~~ 178 (379)
T 2c5a_A 100 LAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPA-EPQDAFGL 178 (379)
T ss_dssp CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSB-CCSSHHHH
T ss_pred CceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCC-CCCChhHH
Confidence 999864321 146778899999999999999999999999999999999985322 3477776 66 68899999
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceE
Q psy16545 145 TKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKV 224 (600)
Q Consensus 145 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~ 224 (600)
||.++|++++.++.+. +++++++||+++|||......+ ...+++.+.+.+....+.++++++|.+.++++|++
T Consensus 179 sK~~~E~~~~~~~~~~-gi~~~ilrp~~v~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~ 251 (379)
T 2c5a_A 179 EKLATEELCKHYNKDF-GIECRIGRFHNIYGPFGTWKGG------REKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFID 251 (379)
T ss_dssp HHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTSCCSSS------CCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHH
T ss_pred HHHHHHHHHHHHHHHH-CCCEEEEEeCceeCcCCCcccc------cccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHH
Confidence 9999999999998876 9999999999999996432110 12255555554432223478899999999999999
Q ss_pred Eeeeccccc
Q psy16545 225 VAIDNFVNS 233 (600)
Q Consensus 225 d~v~~~~~a 233 (600)
|+++.+..+
T Consensus 252 Dva~ai~~~ 260 (379)
T 2c5a_A 252 ECVEGVLRL 260 (379)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998876654
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-22 Score=210.38 Aligned_cols=206 Identities=17% Similarity=0.151 Sum_probs=157.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------------cccccChHHhhhHHhhhhccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------------EGDIVSMYANTDLAQKELGWS 60 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------~~Dl~~~~~~~~~~~~~~~~~ 60 (600)
.|||++|++|+++.+... ..+.++++++|+ .+|++|.+++.+
T Consensus 28 lVtGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~--------- 96 (375)
T 1t2a_A 28 LITGITGQDGSYLAEFLL--EKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVK--------- 96 (375)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHH---------
T ss_pred EEECCCchHHHHHHHHHH--HCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHH---------
Confidence 589999999999965322 122233322221 578999888888
Q ss_pred ccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCC---CeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV---YQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 61 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~---~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
+++..++|+||||||.........++...+++|+.++.+|+++|.+.++ ++||++||.++|+.....+++|+++. .
T Consensus 97 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~-~ 175 (375)
T 1t2a_A 97 IINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPF-Y 175 (375)
T ss_dssp HHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCC-C
T ss_pred HHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCC-C
Confidence 5543368999999998754434467788999999999999999999887 79999999999997766789999998 8
Q ss_pred CCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhH-HHHHhhcCCCCeEEEecCCcc
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMP-YLAQVAIGSKPHFTVFGADYE 216 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~g~g~~ 216 (600)
|.++|+.||+++|++++.++.++ +++++++|++++|||.....+ ....+. .+.+...+. .+...+|+|.+
T Consensus 176 ~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~r~~~~~gp~~~~~~-------~~~~~~~~~~~~~~g~-~~~~~~g~~~~ 246 (375)
T 1t2a_A 176 PRSPYGAAKLYAYWIVVNFREAY-NLFAVNGILFNHESPRRGANF-------VTRKISRSVAKIYLGQ-LECFSLGNLDA 246 (375)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTSCTTS-------HHHHHHHHHHHHHHTS-CSCEEESCTTC
T ss_pred CCChhHHHHHHHHHHHHHHHHHh-CCCEEEEecccccCCCCCCCc-------chHHHHHHHHHHHcCC-CceeEeCCCCc
Confidence 99999999999999999998887 899999999999999643111 122233 333444433 33345799999
Q ss_pred cccCcceEEeeecccccc
Q psy16545 217 TEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 217 ~~~~~~v~d~v~~~~~a~ 234 (600)
.++++|++|+++.+..++
T Consensus 247 ~~~~i~v~Dva~a~~~~~ 264 (375)
T 1t2a_A 247 KRDWGHAKDYVEAMWLML 264 (375)
T ss_dssp EECCEEHHHHHHHHHHHH
T ss_pred eeeeEEHHHHHHHHHHHH
Confidence 999999999998766553
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.7e-22 Score=205.90 Aligned_cols=248 Identities=18% Similarity=0.168 Sum_probs=177.5
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcC-----CCEEEEec
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-----VYQLVFSS 325 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-----~~r~v~~S 325 (600)
+.+++++.+|+.+.+.+.++++ .++|+|||+|+... ..+..++...++.|+.++.+++++|++.+ +++|||+|
T Consensus 63 ~~~~~~~~~Dl~d~~~~~~~~~-~~~d~vih~A~~~~-~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~S 140 (342)
T 2hrz_A 63 SGAVDARAADLSAPGEAEKLVE-ARPDVIFHLAAIVS-GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTS 140 (342)
T ss_dssp CSEEEEEECCTTSTTHHHHHHH-TCCSEEEECCCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_pred CCceeEEEcCCCCHHHHHHHHh-cCCCEEEECCccCc-ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeC
Confidence 3468899999999999988884 27999999999753 23345788899999999999999999876 89999999
Q ss_pred CcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cC-CCCcchHHHHHHHHHHHh
Q psy16545 326 SCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LG-TGQGTSVLQLLRTFERVT 403 (600)
Q Consensus 326 S~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g-~~~~~~~~~~~~~~~~~~ 403 (600)
|.++||.....+++|+++..|. ++|+.+| ..+|.+++.+...++++.+++|+.. +| |+...
T Consensus 141 S~~~~~~~~~~~~~E~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~------------- 203 (342)
T 2hrz_A 141 SIAVFGAPLPYPIPDEFHTTPL-TSYGTQK---AICELLLSDYSRRGFFDGIGIRLPTICIRPGKPN------------- 203 (342)
T ss_dssp EGGGCCSSCCSSBCTTCCCCCS-SHHHHHH---HHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCC-------------
T ss_pred chHhhCCCCCCCcCCCCCCCCc-chHHHHH---HHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCc-------------
Confidence 9999997656789999988775 8999999 7899999999988889999999876 43 32110
Q ss_pred CCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccc
Q psy16545 404 GNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSV 483 (600)
Q Consensus 404 g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 483 (600)
++. ...+..++..+ ..+.+..+. ..++. .
T Consensus 204 ------------~~~-------------------------------~~~~~~~~~~~--~~~~~~~~~----~~~~~--~ 232 (342)
T 2hrz_A 204 ------------AAA-------------------------------SGFFSNILREP--LVGQEAVLP----VPESI--R 232 (342)
T ss_dssp ------------CSG-------------------------------GGHHHHHHHHH--HTTCCEEEC----SCTTC--E
T ss_pred ------------chh-------------------------------HHHHHHHHHHH--hcCCCeecc----CCCcc--c
Confidence 000 00011111111 123333221 11111 1
Q ss_pred hhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCC----ceeEeEcCCCCCccHHHHHHHHhhhcCCccc
Q psy16545 484 LQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV----PYIFYNLGTGQGTSVLQLLRTFERVTGKPVP 559 (600)
Q Consensus 484 ~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~----~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~ 559 (600)
++|+| ++|+++++..++..+. .+++||++ ++.+|++|+++.+.+.+|.+..
T Consensus 233 ----~~~~~--------------------v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~ 287 (342)
T 2hrz_A 233 ----HWHAS--------------------PRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAV 287 (342)
T ss_dssp ----EEEEC--------------------HHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHH
T ss_pred ----eeeEe--------------------hHHHHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccc
Confidence 45566 8899999888876542 46899996 6789999999999999997642
Q ss_pred --ccccCCCC-C---CccccccChHHHHHHcCceeeEEEEe
Q psy16545 560 --YIVEARRE-G---DIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 560 --~~~~~~~~-~---~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+...+.+. . ......+|++|+++ |||+|+++++.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~l~e 327 (342)
T 2hrz_A 288 ALIRREPNEMIMRMCEGWAPGFEAKRARE-LGFTAESSFEE 327 (342)
T ss_dssp TTEEECCCHHHHHHHTTSCCCBCCHHHHH-TTCCCCSSHHH
T ss_pred cceeeccCcchhhhhcccccccChHHHHH-cCCCCCCCHHH
Confidence 33333211 0 01112579999999 99999988764
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-22 Score=226.95 Aligned_cols=215 Identities=40% Similarity=0.598 Sum_probs=168.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
.|||++|++|+++.+... ..+.++++++|. .+|+++.+++.+ +++..
T Consensus 15 lVTGatG~IG~~l~~~L~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~---------~~~~~ 83 (699)
T 1z45_A 15 LVTGGAGYIGSHTVVELI--ENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEK---------VFKEY 83 (699)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHH---------HHHHS
T ss_pred EEECCCCHHHHHHHHHHH--HCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHH---------HHHhC
Confidence 589999999999965332 222333333321 579999888888 55434
Q ss_pred CCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCC----CCCCCCCCCCCCCCCh
Q psy16545 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQ----FLPITEDHPTGNIKNV 141 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~----~~~~~E~~~~~~p~s~ 141 (600)
++|+||||||.........++...+++|+.++.+|+++|++.++++||++||.++||... ..+++|+.+. .|.++
T Consensus 84 ~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~-~p~~~ 162 (699)
T 1z45_A 84 KIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPL-GPTNP 162 (699)
T ss_dssp CCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC-CCCSH
T ss_pred CCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCC-CCCCh
Confidence 799999999987543334456778999999999999999999999999999999998542 2578899888 88999
Q ss_pred HHHHHHHHHHHHHHHHhhc-CCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEec------CC
Q psy16545 142 YGKTKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG------AD 214 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g------~g 214 (600)
|+.||+++|++++.++.+. .+++++++||+++|||++.+.+|++..+....+++.+.+.+.+.++++.++| +|
T Consensus 163 Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 242 (699)
T 1z45_A 163 YGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDG 242 (699)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCS
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCC
Confidence 9999999999999987762 3899999999999999988888776544446688888887765555677777 78
Q ss_pred cccccCcceEEeeecccccc
Q psy16545 215 YETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 215 ~~~~~~~~v~d~v~~~~~a~ 234 (600)
.+.++++|++|+++++..++
T Consensus 243 ~~~~~~i~v~Dva~a~~~a~ 262 (699)
T 1z45_A 243 TPIRDYIHVVDLAKGHIAAL 262 (699)
T ss_dssp SCEECEEEHHHHHHHHHHHH
T ss_pred CeeEeeEEHHHHHHHHHHHH
Confidence 99999999999988766543
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.4e-22 Score=202.34 Aligned_cols=207 Identities=18% Similarity=0.148 Sum_probs=157.2
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc----------cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKA 78 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~ 78 (600)
|||++|++|+++.+.......+.++++++|+ .+|+.|.+++.+ +++..++|+|||+||...
T Consensus 4 VtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~D~~d~~~~~~---------~~~~~~~d~vih~a~~~~ 74 (317)
T 3ajr_A 4 VTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEIDR---------AVEKYSIDAIFHLAGILS 74 (317)
T ss_dssp EESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCTTCCEEECCTTCHHHHHH---------HHHHTTCCEEEECCCCCH
T ss_pred EEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccccCceEEEecCCCHHHHHH---------HHhhcCCcEEEECCcccC
Confidence 7999999999996532211012333333332 589999998888 554447999999999764
Q ss_pred cccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCC-CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q psy16545 79 VGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP-QFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLS 157 (600)
Q Consensus 79 ~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~-~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~ 157 (600)
. ....++...+++|+.++.+|+++|++.++++||++||.++|+.. ...+.+|+.+. .|.++|+.||+++|++++.++
T Consensus 75 ~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~-~p~~~Y~~sK~~~e~~~~~~~ 152 (317)
T 3ajr_A 75 A-KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITIT-RPRTMFGVTKIAAELLGQYYY 152 (317)
T ss_dssp H-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCC-CCCSHHHHHHHHHHHHHHHHH
T ss_pred C-ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccC-CCCchHHHHHHHHHHHHHHHH
Confidence 2 22356778999999999999999999999999999999999864 33567888888 899999999999999999988
Q ss_pred hhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeecccccc
Q psy16545 158 KAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 158 ~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a~ 234 (600)
+++ +++++++||+++||+...+.. +..+.+.+.+.+.+. . +++.+++++.+.++++|++|+++.+..++
T Consensus 153 ~~~-~~~~~~lR~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~l 221 (317)
T 3ajr_A 153 EKF-GLDVRSLRYPGIISYKAEPTA-----GTTDYAVEIFYYAVK-R-EKYKCYLAPNRALPMMYMPDALKALVDLY 221 (317)
T ss_dssp HHH-CCEEEEEEECEEECSSSCCCS-----CSSTHHHHHHHHHHT-T-CCEEECSCTTCCEEEEEHHHHHHHHHHHH
T ss_pred Hhc-CCeEEEEecCcEeccCCCCCC-----cchhHHHHHHHHHHh-C-CCceeecCccceeeeeEHHHHHHHHHHHH
Confidence 776 999999999999998532110 011235556666554 2 35667888999999999999988766553
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.6e-22 Score=203.99 Aligned_cols=206 Identities=20% Similarity=0.168 Sum_probs=157.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTHD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~ 66 (600)
.|||++|++|+++.+... ..+.++++++|+ .+|++|.+++.+ +++..+
T Consensus 7 lVtGatG~iG~~l~~~L~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~~~~ 75 (345)
T 2z1m_A 7 LITGIRGQDGAYLAKLLL--EKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIR---------TIEKVQ 75 (345)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHH---------HHHHHC
T ss_pred EEECCCChHHHHHHHHHH--HCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHH---------HHHhcC
Confidence 489999999999965322 223344443332 578888888888 554336
Q ss_pred CCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCC-CeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHH
Q psy16545 67 IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV-YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKT 145 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~s 145 (600)
+|+||||||......+..++...+++|+.|+.+++++|.+.++ ++||++||.++||.....+++|+.+. .|.++|+.|
T Consensus 76 ~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~-~~~~~Y~~s 154 (345)
T 2z1m_A 76 PDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPF-YPRSPYAVA 154 (345)
T ss_dssp CSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCC-CCCSHHHHH
T ss_pred CCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCC-CCCChhHHH
Confidence 8999999998755445677888999999999999999998886 89999999999998777789999998 899999999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHH-HHHhhcCCCCeEEEecCCcccccCcceE
Q psy16545 146 KHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPY-LAQVAIGSKPHFTVFGADYETEDGTGKV 224 (600)
Q Consensus 146 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~g~g~~~~~~~~v~ 224 (600)
|.++|.+++.++.++ +++++++|++++|||+....+ ....++. +.+...+. ....+++++.+.|+++|++
T Consensus 155 K~~~e~~~~~~~~~~-~~~~~~~r~~~~~gpg~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~ 225 (345)
T 2z1m_A 155 KLFGHWITVNYREAY-NMFACSGILFNHESPLRGIEF-------VTRKITYSLARIKYGL-QDKLVLGNLNAKRDWGYAP 225 (345)
T ss_dssp HHHHHHHHHHHHHHH-CCCEEEEEECCEECTTSCTTS-------HHHHHHHHHHHHHTTS-CSCEEESCTTCEECCEEHH
T ss_pred HHHHHHHHHHHHHHh-CCceEeeeeeeecCCCCCCcc-------hhHHHHHHHHHHHcCC-CCeeeeCCCCceeeeEEHH
Confidence 999999999998887 899999999999999643111 1122332 33333332 2333578999999999999
Q ss_pred Eeeecccccc
Q psy16545 225 VAIDNFVNSV 234 (600)
Q Consensus 225 d~v~~~~~a~ 234 (600)
|+++.+..++
T Consensus 226 Dva~a~~~~~ 235 (345)
T 2z1m_A 226 EYVEAMWLMM 235 (345)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9988766553
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-21 Score=192.46 Aligned_cols=227 Identities=16% Similarity=0.078 Sum_probs=169.6
Q ss_pred EEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCCC
Q psy16545 257 YSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL 336 (600)
Q Consensus 257 i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~ 336 (600)
+.+|+.+++.+.++++..++|+|||+|+......+..++...++.|+.++.+++++|++.++ ||||+||.++|+....
T Consensus 39 ~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~- 116 (273)
T 2ggs_A 39 YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKG- 116 (273)
T ss_dssp EECCTTSHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSC-
T ss_pred ceeccCCHHHHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCC-
Confidence 78999999999999885459999999997655444568889999999999999999999886 9999999999986544
Q ss_pred CCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCCCCcceEEeeCC
Q psy16545 337 PITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLG 416 (600)
Q Consensus 337 ~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g 416 (600)
+++|+++..|. +.|+.+| ...|.+++. ++++++|++.+.+ . ..+.
T Consensus 117 ~~~e~~~~~~~-~~Y~~sK---~~~e~~~~~------~~~~~iR~~~v~G-~-~~~~----------------------- 161 (273)
T 2ggs_A 117 NYKEEDIPNPI-NYYGLSK---LLGETFALQ------DDSLIIRTSGIFR-N-KGFP----------------------- 161 (273)
T ss_dssp SBCTTSCCCCS-SHHHHHH---HHHHHHHCC------TTCEEEEECCCBS-S-SSHH-----------------------
T ss_pred CcCCCCCCCCC-CHHHHHH---HHHHHHHhC------CCeEEEecccccc-c-cHHH-----------------------
Confidence 78999887775 8999999 678888775 6789999887421 1 1110
Q ss_pred CCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhhhcCC
Q psy16545 417 TGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK 496 (600)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~ 496 (600)
..+...+ ..+.++.+. ++ . ++|+|
T Consensus 162 -------------------------------------~~~~~~~--~~~~~~~~~------~~-~------~~~~~---- 185 (273)
T 2ggs_A 162 -------------------------------------IYVYKTL--KEGKTVFAF------KG-Y------YSPIS---- 185 (273)
T ss_dssp -------------------------------------HHHHHHH--HTTCCEEEE------SC-E------ECCCB----
T ss_pred -------------------------------------HHHHHHH--HcCCCEEee------cC-C------CCceE----
Confidence 0011111 113333221 11 1 66777
Q ss_pred CccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccccccc----CCCCCCccc
Q psy16545 497 PVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVE----ARREGDIVS 572 (600)
Q Consensus 497 ~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~----~~~~~~~~~ 572 (600)
++|+++++..++.++. .++||+++ +.+|+.|+++.+.+.+|.+.++... ......+..
T Consensus 186 ----------------~~dva~~i~~~~~~~~-~g~~~i~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 247 (273)
T 2ggs_A 186 ----------------ARKLASAILELLELRK-TGIIHVAG-ERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYD 247 (273)
T ss_dssp ----------------HHHHHHHHHHHHHHTC-CEEEECCC-CCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSB
T ss_pred ----------------HHHHHHHHHHHHhcCc-CCeEEECC-CcccHHHHHHHHHHHhCCChhhcccccccccccCCCcc
Confidence 8899999988886543 56999998 9999999999999999986544321 122334456
Q ss_pred cccChHHHHHHcCcee-eEEEEe
Q psy16545 573 MYANTDLAQRELGWSA-RCTVKI 594 (600)
Q Consensus 573 ~~~d~~k~~~~lG~~p-~~~l~~ 594 (600)
..+|++|++++|||+| .++++.
T Consensus 248 ~~~d~~k~~~~lG~~p~~~~l~~ 270 (273)
T 2ggs_A 248 SSLDSSRARKILSTDFYTLDLDG 270 (273)
T ss_dssp CCBCCHHHHHHCSSCCCSCCGGG
T ss_pred cccCHHHHHHHhCCCCCCccccc
Confidence 7899999999999999 678764
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.86 E-value=6e-22 Score=204.39 Aligned_cols=208 Identities=14% Similarity=0.105 Sum_probs=153.3
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccCh-HHhhhHHhhhhcccccccCCCCEEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSM-YANTDLAQKELGWSARCTHDIDCVI 71 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~-~~~~~~~~~~~~~~~~~~~~~d~Vi 71 (600)
|||++|++|+++.+..... .+.++++++|. .+|+.+. +.+.+ +++ ++|+||
T Consensus 5 VtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~---------~~~--~~d~vi 72 (345)
T 2bll_A 5 ILGVNGFIGNHLTERLLRE-DHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEY---------HVK--KCDVVL 72 (345)
T ss_dssp EETCSSHHHHHHHHHHHHS-TTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHH---------HHH--HCSEEE
T ss_pred EECCCcHHHHHHHHHHHHh-CCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHh---------hcc--CCCEEE
Confidence 7999999999996533211 12334433332 5678773 45555 555 789999
Q ss_pred EcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCC------CCCCChHHHH
Q psy16545 72 HFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPT------GNIKNVYGKT 145 (600)
Q Consensus 72 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~------~~p~s~Y~~s 145 (600)
||||...+.....++...+++|+.++.+++++|++.+ ++||++||.++||.....+++|+++. ..|.++|+.|
T Consensus 73 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~s 151 (345)
T 2bll_A 73 PLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVS 151 (345)
T ss_dssp ECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHH
T ss_pred EcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHH
Confidence 9999875433345677899999999999999999988 89999999999997766678888653 0244589999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEE
Q psy16545 146 KHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVV 225 (600)
Q Consensus 146 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d 225 (600)
|.++|++++.++++. +++++++||+++|||+......+.. ....+++.+...+. .++++.++++|.+.++++|++|
T Consensus 152 K~~~e~~~~~~~~~~-~~~~~ilrp~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~v~D 227 (345)
T 2bll_A 152 KQLLDRVIWAYGEKE-GLQFTLFRPFNWMGPRLDNLNAARI--GSSRAITQLILNLV-EGSPIKLIDGGKQKRCFTDIRD 227 (345)
T ss_dssp HHHHHHHHHHHHHHH-CCCEEEEEECSEECSSCCCTTCSBS--CBCHHHHHHHHHHH-HTCCEEEGGGSCCEEECEEHHH
T ss_pred HHHHHHHHHHHHHhc-CCCEEEEcCCcccCCCccccccccc--ccccHHHHHHHHHH-cCCCcEEECCCCEEEEEEEHHH
Confidence 999999999998876 9999999999999997532110000 01335555554444 3457788899999999999999
Q ss_pred eeeccccc
Q psy16545 226 AIDNFVNS 233 (600)
Q Consensus 226 ~v~~~~~a 233 (600)
+++.+..+
T Consensus 228 va~a~~~~ 235 (345)
T 2bll_A 228 GIEALYRI 235 (345)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98876655
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-21 Score=202.22 Aligned_cols=210 Identities=21% Similarity=0.240 Sum_probs=149.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccccccccc-ChHHhh-----hHHhhhhcccccccCCCCEEEEcCcccCccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIV-SMYANT-----DLAQKELGWSARCTHDIDCVIHFAAVKAVGE 81 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~-----~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~ 81 (600)
.|||++|++|+++.+. +...+.++++++|...... ..+.+. ...+-+..-..+ .++|+||||||......
T Consensus 31 lVtGatG~iG~~l~~~--L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--~~~d~vih~A~~~~~~~ 106 (343)
T 2b69_A 31 LITGGAGFVGSHLTDK--LMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLY--IEVDQIYHLASPASPPN 106 (343)
T ss_dssp EEETTTSHHHHHHHHH--HHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCC--CCCSEEEECCSCCSHHH
T ss_pred EEEcCccHHHHHHHHH--HHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhh--cCCCEEEECccccCchh
Confidence 5899999999999653 3333456665555321100 000000 000000000022 26899999999875443
Q ss_pred CCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCC-----CCCCCCCChHHHHHHHHHHHHHHH
Q psy16545 82 SMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITED-----HPTGNIKNVYGKTKHFIEEMLKDL 156 (600)
Q Consensus 82 ~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~-----~~~~~p~s~Y~~sK~~~e~~~~~~ 156 (600)
...++...+++|+.++.+|+++|++.++ ++|++||.++||.....+++|+ .+. .|.++|+.||+++|++++.+
T Consensus 107 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~-~~~~~Y~~sK~~~E~~~~~~ 184 (343)
T 2b69_A 107 YMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPI-GPRACYDEGKRVAETMCYAY 184 (343)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSS-STTHHHHHHHHHHHHHHHHH
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCC-CCCCchHHHHHHHHHHHHHH
Confidence 4567788999999999999999999887 9999999999997766778887 466 67889999999999999998
Q ss_pred HhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 157 SKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 157 ~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
+++. +++++++||+++|||...+. ...+++.+...+. .++++.++++|.+.++++|++|+++.+..+
T Consensus 185 ~~~~-~~~~~ilrp~~v~G~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~ 251 (343)
T 2b69_A 185 MKQE-GVEVRVARIFNTFGPRMHMN--------DGRVVSNFILQAL-QGEPLTVYGSGSQTRAFQYVSDLVNGLVAL 251 (343)
T ss_dssp HHHH-CCCEEEEEECCEECTTCCTT--------CCCHHHHHHHHHH-HTCCEEEESSSCCEEECEEHHHHHHHHHHH
T ss_pred HHHh-CCcEEEEEEcceeCcCCCCC--------cccHHHHHHHHHH-cCCCceEcCCCCeEEeeEeHHHHHHHHHHH
Confidence 8776 99999999999999964321 1235554444443 335778899999999999999988766544
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-21 Score=202.01 Aligned_cols=248 Identities=17% Similarity=0.129 Sum_probs=161.5
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEecCcc-
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPL-MYYKNNLIATINLLEVMKSHG-VYQLVFSSSCT- 328 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~-~~~~~Nv~gt~~ll~~~~~~~-~~r~v~~SS~~- 328 (600)
.+++++.+|+.+.+.+.++++ ++|+|||+|+.... ...++. ..++.|+.++.+++++|++.+ ++||||+||.+
T Consensus 59 ~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~ 134 (338)
T 2rh8_A 59 GDLKIFRADLTDELSFEAPIA--GCDFVFHVATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAA 134 (338)
T ss_dssp SCEEEEECCTTTSSSSHHHHT--TCSEEEEESSCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHH
T ss_pred CcEEEEecCCCChHHHHHHHc--CCCEEEEeCCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHH
Confidence 468899999999999999887 78999999986522 223443 488999999999999999985 89999999987
Q ss_pred cccCCC---CCCCCCCCCCC--------CCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHH
Q psy16545 329 VYGEPQ---FLPITEDHPTG--------NIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLL 396 (600)
Q Consensus 329 vYg~~~---~~~~~E~~~~~--------~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~ 396 (600)
+|+... ..+++|+.+.. |...+|+.|| ..+|.+++.+.+.++++++++||++ +||+........+
T Consensus 135 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK---~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~ 211 (338)
T 2rh8_A 135 VTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASK---TLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSI 211 (338)
T ss_dssp HHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSC---CHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHH
T ss_pred eecCCcCCCCcccChhhccchhhccccCCccchHHHHH---HHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchH
Confidence 554321 13678886322 1212699999 7799999999888899999999987 5554321110000
Q ss_pred HHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCC
Q psy16545 397 RTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLG 476 (600)
Q Consensus 397 ~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (600)
.. +.. ...+.+..+ +
T Consensus 212 ~~---------------------------------------------------------~~~---~~~g~~~~~-----~ 226 (338)
T 2rh8_A 212 GL---------------------------------------------------------AMS---LITGNEFLI-----N 226 (338)
T ss_dssp HH---------------------------------------------------------HHH---HHHTCHHHH-----H
T ss_pred HH---------------------------------------------------------HHH---HHcCCcccc-----c
Confidence 00 000 001111000 0
Q ss_pred CCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCC
Q psy16545 477 TGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK 556 (600)
Q Consensus 477 ~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~ 556 (600)
.+.+.+.++-.++|+| ++|+++++..+++.+...+.||+++ ..+|++|+++.+.+..+.
T Consensus 227 ~~~~~~~~~~~~~~i~--------------------v~Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~l~~~~~~ 285 (338)
T 2rh8_A 227 GMKGMQMLSGSVSIAH--------------------VEDVCRAHIFVAEKESASGRYICCA-ANTSVPELAKFLSKRYPQ 285 (338)
T ss_dssp HHHHHHHHHSSEEEEE--------------------HHHHHHHHHHHHHCTTCCEEEEECS-EEECHHHHHHHHHHHCTT
T ss_pred cccccccccCcccEEE--------------------HHHHHHHHHHHHcCCCcCCcEEEec-CCCCHHHHHHHHHHhCCC
Confidence 0000000000036777 8899999988886654556898875 469999999999998863
Q ss_pred -cccccccCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 557 -PVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 557 -~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
+++..+.+. ... ....+|++|+ ++|||+|+++++.+
T Consensus 286 ~~~~~~~~~~-~~~-~~~~~d~~k~-~~lG~~p~~~l~~g 322 (338)
T 2rh8_A 286 YKVPTDFGDF-PPK-SKLIISSEKL-VKEGFSFKYGIEEI 322 (338)
T ss_dssp SCCCCCCTTS-CSS-CSCCCCCHHH-HHHTCCCSCCHHHH
T ss_pred CCCCCCCCCC-CcC-cceeechHHH-HHhCCCCCCCHHHH
Confidence 333222221 222 2378899999 56999999988653
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-21 Score=205.30 Aligned_cols=204 Identities=18% Similarity=0.090 Sum_probs=154.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------------cccccChHHhhhHHhhhhccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------------EGDIVSMYANTDLAQKELGWS 60 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------~~Dl~~~~~~~~~~~~~~~~~ 60 (600)
.|||++|++|+++.+.... .+.++++++|. .+|+.|.+++.+
T Consensus 32 lVtGatG~IG~~l~~~L~~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~--------- 100 (381)
T 1n7h_A 32 LITGITGQDGSYLTEFLLG--KGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRR--------- 100 (381)
T ss_dssp EEETTTSHHHHHHHHHHHH--TTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHH---------
T ss_pred EEEcCCchHHHHHHHHHHH--CCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHH---------
Confidence 5899999999999653221 12222222221 678999888888
Q ss_pred ccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCC-----eEEEecCccccCCCCCCCCCCCCCC
Q psy16545 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY-----QLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 61 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~-----r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
+++..++|+||||||......+..++...+++|+.++.+|+++|.+.+++ +||++||.++||.... +++|+++.
T Consensus 101 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~ 179 (381)
T 1n7h_A 101 WIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPF 179 (381)
T ss_dssp HHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCC
T ss_pred HHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCC
Confidence 55433689999999987654345677889999999999999999987765 9999999999997766 89999998
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhH-HHHHhhcCCCCeEEEecCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMP-YLAQVAIGSKPHFTVFGAD 214 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~g~g 214 (600)
.|.++|+.||+++|++++.++.++ +++++++|++++|||+....+ ...++. .+.+...+. .....+|+|
T Consensus 180 -~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~r~~~~~gp~~~~~~-------~~~~~~~~~~~~~~g~-~~~~~~g~~ 249 (381)
T 1n7h_A 180 -HPRSPYAASKCAAHWYTVNYREAY-GLFACNGILFNHESPRRGENF-------VTRKITRALGRIKVGL-QTKLFLGNL 249 (381)
T ss_dssp -CCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTSCTTS-------HHHHHHHHHHHHHHTS-CCCEEESCT
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHh-CCcEEEEEeCceeCCCCCCcc-------hhHHHHHHHHHHHcCC-CCeEEeCCC
Confidence 899999999999999999998877 899999999999999643211 112233 333344433 233457999
Q ss_pred cccccCcceEEeeeccccc
Q psy16545 215 YETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 215 ~~~~~~~~v~d~v~~~~~a 233 (600)
.+.++++|++|+++.+..+
T Consensus 250 ~~~~~~v~v~Dva~a~~~~ 268 (381)
T 1n7h_A 250 QASRDWGFAGDYVEAMWLM 268 (381)
T ss_dssp TCEEECEEHHHHHHHHHHH
T ss_pred CceeeeEEHHHHHHHHHHH
Confidence 9999999999998876655
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-20 Score=193.62 Aligned_cols=240 Identities=15% Similarity=0.175 Sum_probs=165.0
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEecCcc-c
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPL-MYYKNNLIATINLLEVMKSHG-VYQLVFSSSCT-V 329 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~-~~~~~Nv~gt~~ll~~~~~~~-~~r~v~~SS~~-v 329 (600)
+++++.+|+.+.+.+.++++ ++|+|||+|+... ....++. ..++.|+.++.+++++|++.+ ++||||+||.+ +
T Consensus 57 ~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~A~~~~--~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~ 132 (337)
T 2c29_D 57 HLTLWKADLADEGSFDEAIK--GCTGVFHVATPMD--FESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTV 132 (337)
T ss_dssp HEEEEECCTTSTTTTHHHHT--TCSEEEECCCCCC--SSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGT
T ss_pred eEEEEEcCCCCHHHHHHHHc--CCCEEEEeccccC--CCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhc
Confidence 57899999999999999987 7899999998642 2223454 578999999999999999987 89999999987 5
Q ss_pred ccCCC-CCCCCCCCCCC--------CCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHH
Q psy16545 330 YGEPQ-FLPITEDHPTG--------NIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTF 399 (600)
Q Consensus 330 Yg~~~-~~~~~E~~~~~--------~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~ 399 (600)
|+... ..+++|+.+.. ++.++|+.|| ..+|.+++.+.+.++++++++||++ +||+....+...
T Consensus 133 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK---~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~---- 205 (337)
T 2c29_D 133 NIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSK---TLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPS---- 205 (337)
T ss_dssp SCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHH---HHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHH----
T ss_pred ccCCCCCcccCcccCCchhhhcccCCccchHHHHH---HHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCch----
Confidence 65432 23567775321 1235799999 7899999999888899999999987 554322110000
Q ss_pred HHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCC
Q psy16545 400 ERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQ 479 (600)
Q Consensus 400 ~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 479 (600)
+...+....+.+... +.
T Consensus 206 --------------------------------------------------------~~~~~~~~~g~~~~~-------~~ 222 (337)
T 2c29_D 206 --------------------------------------------------------LITALSPITGNEAHY-------SI 222 (337)
T ss_dssp --------------------------------------------------------HHHHTHHHHTCGGGH-------HH
T ss_pred --------------------------------------------------------HHHHHHHHcCCCccc-------cc
Confidence 000000011221100 00
Q ss_pred cccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCC-cc
Q psy16545 480 GTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK-PV 558 (600)
Q Consensus 480 ~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~-~~ 558 (600)
+.+ ..|+| ++|+++++..++..+...+.|++++ ..+|++|+++.+.+.++. ++
T Consensus 223 ~~~-----~~~i~--------------------v~Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~~~ 276 (337)
T 2c29_D 223 IRQ-----GQFVH--------------------LDDLCNAHIYLFENPKAEGRYICSS-HDCIILDLAKMLREKYPEYNI 276 (337)
T ss_dssp HTE-----EEEEE--------------------HHHHHHHHHHHHHCTTCCEEEEECC-EEEEHHHHHHHHHHHCTTSCC
T ss_pred cCC-----CCEEE--------------------HHHHHHHHHHHhcCcccCceEEEeC-CCCCHHHHHHHHHHHCCCccC
Confidence 000 22666 8999999988886654456787764 569999999999998853 33
Q ss_pred cccccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 559 PYIVEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 559 ~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+..+.+. ..+.....+|++|+ ++|||+|+++++.
T Consensus 277 ~~~~~~~-~~~~~~~~~d~~k~-~~lG~~p~~~l~e 310 (337)
T 2c29_D 277 PTEFKGV-DENLKSVCFSSKKL-TDLGFEFKYSLED 310 (337)
T ss_dssp CSCCTTC-CTTCCCCEECCHHH-HHHTCCCCCCHHH
T ss_pred CCCCCcc-cCCCccccccHHHH-HHcCCCcCCCHHH
Confidence 3222221 23445677899999 7799999998764
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.84 E-value=6.5e-21 Score=196.42 Aligned_cols=193 Identities=10% Similarity=-0.053 Sum_probs=139.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIH 72 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih 72 (600)
.|||++|++|+++.+... ..+.++++++|+ .+|+.|.+++.+ +++ ++|+|||
T Consensus 17 lVtGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~---------~~~--~~d~vih 83 (342)
T 2x4g_A 17 AVLGATGLLGHHAARAIR--AAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLER---------ALR--GLDGVIF 83 (342)
T ss_dssp EEESTTSHHHHHHHHHHH--HTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHH---------HTT--TCSEEEE
T ss_pred EEECCCcHHHHHHHHHHH--HCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHH---------HHc--CCCEEEE
Confidence 589999999999965332 122333333332 679999988888 776 7999999
Q ss_pred cCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCC--CCCCCCCCCCCC----CChHHHHH
Q psy16545 73 FAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQF--LPITEDHPTGNI----KNVYGKTK 146 (600)
Q Consensus 73 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~--~~~~E~~~~~~p----~s~Y~~sK 146 (600)
+||... ....++...+++|+.++.+++++|++.++++||++||.++|+.... .+ +|+++. .| .++|+.+|
T Consensus 84 ~a~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~-~p~~~~~~~Y~~sK 159 (342)
T 2x4g_A 84 SAGYYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFY-DSLPSGKSSYVLCK 159 (342)
T ss_dssp C--------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCC-SSCCTTSCHHHHHH
T ss_pred CCccCc--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCC-CccccccChHHHHH
Confidence 999764 2345677799999999999999999999999999999999986544 44 899988 78 89999999
Q ss_pred HHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEe
Q psy16545 147 HFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVA 226 (600)
Q Consensus 147 ~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~ 226 (600)
+++|++++.+++. +++++++||+++|||... . .. ++.+...+. .+..+.+ |.+.++++|++|+
T Consensus 160 ~~~e~~~~~~~~~--g~~~~ilrp~~v~g~~~~-----~-----~~-~~~~~~~~~-~~~~~~~---~~~~~~~i~v~Dv 222 (342)
T 2x4g_A 160 WALDEQAREQARN--GLPVVIGIPGMVLGELDI-----G-----PT-TGRVITAIG-NGEMTHY---VAGQRNVIDAAEA 222 (342)
T ss_dssp HHHHHHHHHHHHT--TCCEEEEEECEEECSCCS-----S-----CS-TTHHHHHHH-TTCCCEE---ECCEEEEEEHHHH
T ss_pred HHHHHHHHHHhhc--CCcEEEEeCCceECCCCc-----c-----cc-HHHHHHHHH-cCCCccc---cCCCcceeeHHHH
Confidence 9999999998864 899999999999999641 0 01 223333333 2234444 5678899999999
Q ss_pred eecccccc
Q psy16545 227 IDNFVNSV 234 (600)
Q Consensus 227 v~~~~~a~ 234 (600)
++.+..++
T Consensus 223 a~~~~~~~ 230 (342)
T 2x4g_A 223 GRGLLMAL 230 (342)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88776553
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.7e-21 Score=199.12 Aligned_cols=200 Identities=14% Similarity=0.007 Sum_probs=148.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
.|||++|++|+++.+.. ...+.++++++|+ .+|++|.+++.+ +++
T Consensus 15 lVTGatG~iG~~l~~~L--~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~---------~~~- 82 (342)
T 1y1p_A 15 LVTGANGFVASHVVEQL--LEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDE---------VIK- 82 (342)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTT---------TTT-
T ss_pred EEECCccHHHHHHHHHH--HHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHH---------HHc-
Confidence 58999999999996533 2334455544442 468888877777 665
Q ss_pred CCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHH-cCCCeEEEecCccccCCCC----CCCCCCCC------
Q psy16545 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKS-HGVYQLVFSSSCTVYGEPQ----FLPITEDH------ 133 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~-~~~~r~I~~SS~~vyg~~~----~~~~~E~~------ 133 (600)
++|+||||||..... .++...+++|+.++.+++++|.+ .++++||++||.++|+... +.+++|++
T Consensus 83 -~~d~vih~A~~~~~~---~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~ 158 (342)
T 1y1p_A 83 -GAAGVAHIASVVSFS---NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESI 158 (342)
T ss_dssp -TCSEEEECCCCCSCC---SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHH
T ss_pred -CCCEEEEeCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhh
Confidence 799999999987532 46778999999999999999985 5788999999999986432 15678876
Q ss_pred ----------CCCCCCChHHHHHHHHHHHHHHHHhhc-CCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhc
Q psy16545 134 ----------PTGNIKNVYGKTKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAI 202 (600)
Q Consensus 134 ----------~~~~p~s~Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (600)
+. .|.++|+.||+++|++++.++.++ ++++++++||+++|||...... ...+++.+...+.
T Consensus 159 ~~~~~~~~~~~~-~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~-------~~~~~~~~~~~~~ 230 (342)
T 1y1p_A 159 DKAKTLPESDPQ-KSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPET-------QSGSTSGWMMSLF 230 (342)
T ss_dssp HHHHHSCTTSTT-HHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTT-------CCCHHHHHHHHHH
T ss_pred hhhccccccccc-cchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCC-------CCccHHHHHHHHH
Confidence 23 456889999999999999998765 3789999999999999744211 0125555554444
Q ss_pred CCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 203 GSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 203 ~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
.++++.+++++ +.++++|++|+++.+..+
T Consensus 231 -~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~ 259 (342)
T 1y1p_A 231 -NGEVSPALALM-PPQYYVSAVDIGLLHLGC 259 (342)
T ss_dssp -TTCCCHHHHTC-CSEEEEEHHHHHHHHHHH
T ss_pred -cCCCccccccC-CcCCEeEHHHHHHHHHHH
Confidence 33455556766 788999999988766544
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.9e-21 Score=195.89 Aligned_cols=206 Identities=17% Similarity=0.144 Sum_probs=155.0
Q ss_pred cCCCCcchHHHHHHHhhhccCC-----CccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGK-----PVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~-----~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 67 (600)
.|||++|++|+++.+.....+. ..++++++|. .+|++|.+++.+ ++. .++
T Consensus 18 lVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~-~~~ 87 (342)
T 2hrz_A 18 AIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEK---------LVE-ARP 87 (342)
T ss_dssp EEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHH---------HHH-TCC
T ss_pred EEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHH---------HHh-cCC
Confidence 5899999999999653221110 0233333332 579999888887 553 379
Q ss_pred CEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcC-----CCeEEEecCccccCCCCCCCCCCCCCCCCCCChH
Q psy16545 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-----VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVY 142 (600)
Q Consensus 68 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-----~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y 142 (600)
|+||||||.... ....++...+++|+.|+.+|+++|++.+ +++||++||.++|+.....+++|+++. .|.++|
T Consensus 88 d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~-~~~~~Y 165 (342)
T 2hrz_A 88 DVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHT-TPLTSY 165 (342)
T ss_dssp SEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCC-CCSSHH
T ss_pred CEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCC-CCcchH
Confidence 999999997642 2345677899999999999999998876 789999999999997655789999999 899999
Q ss_pred HHHHHHHHHHHHHHHhhcCCceEEEEecccccC-CCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCc
Q psy16545 143 GKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVG-AHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGT 221 (600)
Q Consensus 143 ~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~ 221 (600)
+.||+++|++++.++.++ +++.+++|++.+|| |+.. .+....+++.+.+.+. .++++.+.+++...++++
T Consensus 166 ~~sK~~~e~~~~~~~~~~-~~~~~~ir~~~v~g~pg~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 236 (342)
T 2hrz_A 166 GTQKAICELLLSDYSRRG-FFDGIGIRLPTICIRPGKP-------NAAASGFFSNILREPL-VGQEAVLPVPESIRHWHA 236 (342)
T ss_dssp HHHHHHHHHHHHHHHHTT-SCEEEEEEECEETTCCSSC-------CCSGGGHHHHHHHHHH-TTCCEEECSCTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhc-CCCceeEEeeeEEecCCCC-------cchhHHHHHHHHHHHh-cCCCeeccCCCccceeeE
Confidence 999999999999998876 89999999999999 6421 1112346666555554 345566667777777888
Q ss_pred ceEEeeecccccc
Q psy16545 222 GKVVAIDNFVNSV 234 (600)
Q Consensus 222 ~v~d~v~~~~~a~ 234 (600)
+++|+++++..++
T Consensus 237 ~v~Dva~~~~~~~ 249 (342)
T 2hrz_A 237 SPRSAVGFLIHGA 249 (342)
T ss_dssp CHHHHHHHHHHHH
T ss_pred ehHHHHHHHHHHH
Confidence 9999888766553
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-20 Score=191.03 Aligned_cols=238 Identities=15% Similarity=0.129 Sum_probs=160.0
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccCh-HHHHHHHHHHHHHHHHHHHHc-CCCEEEEecCccc-
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEP-LMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTV- 329 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~-~~~~~~Nv~gt~~ll~~~~~~-~~~r~v~~SS~~v- 329 (600)
+++++.+|+.+.+.+.++++ ++|+|||+|+.. .....++ ...++.|+.++.+++++|++. +++||||+||.++
T Consensus 54 ~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A~~~--~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~ 129 (322)
T 2p4h_X 54 KLHFFNADLSNPDSFAAAIE--GCVGIFHTASPI--DFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAV 129 (322)
T ss_dssp HEEECCCCTTCGGGGHHHHT--TCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGT
T ss_pred ceEEEecCCCCHHHHHHHHc--CCCEEEEcCCcc--cCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHc
Confidence 57888999999999999998 789999999753 2222333 358899999999999999998 7899999999874
Q ss_pred ccCCC-CCCCCCCCCCC--------CCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHH
Q psy16545 330 YGEPQ-FLPITEDHPTG--------NIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTF 399 (600)
Q Consensus 330 Yg~~~-~~~~~E~~~~~--------~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~ 399 (600)
|+... ..+++|+.+.. |....|+.|| ..+|.+++.+.+.++++++++||++ +|++........
T Consensus 130 ~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK---~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~---- 202 (322)
T 2p4h_X 130 SFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSK---TLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDS---- 202 (322)
T ss_dssp SCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHH---HHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHH----
T ss_pred ccCCCCCeecCCccccchhhhcccCcccccHHHHH---HHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCch----
Confidence 44332 23577776421 2212699999 7789999999888899999999987 444321110000
Q ss_pred HHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCC
Q psy16545 400 ERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQ 479 (600)
Q Consensus 400 ~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 479 (600)
+..+ .....+.+..+ +.
T Consensus 203 -----------------------------------------------------~~~~---~~~~~g~~~~~-------~~ 219 (322)
T 2p4h_X 203 -----------------------------------------------------IEKA---LVLVLGKKEQI-------GV 219 (322)
T ss_dssp -----------------------------------------------------HHHH---THHHHSCGGGC-------CE
T ss_pred -----------------------------------------------------HHHH---HHHHhCCCccC-------cC
Confidence 0000 01112332221 11
Q ss_pred cccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCC-cc
Q psy16545 480 GTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK-PV 558 (600)
Q Consensus 480 ~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~-~~ 558 (600)
+. .+|+| ++|+++++..++..+...+.|| ++++.+|+.|+++.+.+..+. ++
T Consensus 220 ~~------~~~i~--------------------v~Dva~a~~~~~~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~~~~~ 272 (322)
T 2p4h_X 220 TR------FHMVH--------------------VDDVARAHIYLLENSVPGGRYN-CSPFIVPIEEMSQLLSAKYPEYQI 272 (322)
T ss_dssp EE------EEEEE--------------------HHHHHHHHHHHHHSCCCCEEEE-CCCEEEEHHHHHHHHHHHCTTSCC
T ss_pred CC------cCEEE--------------------HHHHHHHHHHHhhCcCCCCCEE-EcCCCCCHHHHHHHHHHhCCCCCC
Confidence 11 35767 8899999888876543334599 567899999999999988752 22
Q ss_pred ccc--ccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 559 PYI--VEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 559 ~~~--~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+.. +.+. . ......+|++|+ ++|||+|+++++.
T Consensus 273 ~~~~~~~~~-~-~~~~~~~d~~k~-~~lG~~p~~~~~~ 307 (322)
T 2p4h_X 273 LTVDELKEI-K-GARLPDLNTKKL-VDAGFDFKYTIED 307 (322)
T ss_dssp CCTTTTTTC-C-CEECCEECCHHH-HHTTCCCCCCHHH
T ss_pred CCCccccCC-C-CCcceecccHHH-HHhCCccCCCHHH
Confidence 221 1111 1 124577899999 5699999998764
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.83 E-value=6.1e-21 Score=194.36 Aligned_cols=196 Identities=16% Similarity=0.049 Sum_probs=127.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccccc-------ccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE-------GDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVG 80 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~-------~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~ 80 (600)
.|||++|++|+++.+ .+...+.++++++|+. +|+++.+++.+ +++..++|+||||||.....
T Consensus 6 lVtGatG~iG~~l~~--~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~---------~~~~~~~d~vih~A~~~~~~ 74 (315)
T 2ydy_A 6 LVTGATGLLGRAVHK--EFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHH---------IIHDFQPHVIVHCAAERRPD 74 (315)
T ss_dssp EEETTTSHHHHHHHH--HHHTTTCEEEEEC------------------CHH---------HHHHHCCSEEEECC------
T ss_pred EEECCCcHHHHHHHH--HHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHH---------HHHhhCCCEEEECCcccChh
Confidence 489999999999965 4444456666666542 79999888888 55433699999999987654
Q ss_pred cCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc
Q psy16545 81 ESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH 160 (600)
Q Consensus 81 ~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~ 160 (600)
.+..++...+++|+.++.+|+++|.+.++ +||++||.++|+. ...+++|+++. .|.++|+.||.++|++++.+
T Consensus 75 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~-~~~~~Y~~sK~~~e~~~~~~---- 147 (315)
T 2ydy_A 75 VVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIP-APLNLYGKTKLDGEKAVLEN---- 147 (315)
T ss_dssp -------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCC-CCCSHHHHHHHHHHHHHHHH----
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCC-CCcCHHHHHHHHHHHHHHHh----
Confidence 45567788999999999999999999887 9999999999987 56789999998 89999999999999999886
Q ss_pred CCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 161 KEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 161 ~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
+++++++||+.||||...+. ..+++.+.+.+...++++.+. +.+.+++++++|+++.+..+
T Consensus 148 -~~~~~~lR~~~v~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~ 208 (315)
T 2ydy_A 148 -NLGAAVLRIPILYGEVEKLE---------ESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQL 208 (315)
T ss_dssp -CTTCEEEEECSEECSCSSGG---------GSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHH
T ss_pred -CCCeEEEeeeeeeCCCCccc---------ccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHH
Confidence 34569999999999964310 124444444332123455554 45788999999988765543
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-20 Score=193.74 Aligned_cols=243 Identities=13% Similarity=0.043 Sum_probs=167.3
Q ss_pred CCceeEE-EeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHH-cCCCEEEEecCcc
Q psy16545 251 GKKVDFY-SCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKS-HGVYQLVFSSSCT 328 (600)
Q Consensus 251 ~~~v~~i-~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~-~~~~r~v~~SS~~ 328 (600)
+.+++++ .+|+.+.+.+.++++ ++|+|||+|+..... .++...++.|+.++.+++++|++ .+++||||+||.+
T Consensus 60 ~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih~A~~~~~~---~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~ 134 (342)
T 1y1p_A 60 PGRFETAVVEDMLKQGAYDEVIK--GAAGVAHIASVVSFS---NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV 134 (342)
T ss_dssp TTTEEEEECSCTTSTTTTTTTTT--TCSEEEECCCCCSCC---SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGG
T ss_pred CCceEEEEecCCcChHHHHHHHc--CCCEEEEeCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHH
Confidence 3568888 899999998888887 899999999976432 47788999999999999999985 5789999999999
Q ss_pred cccCCC----CCCCCCCCC----------------CCCCCcccccchhhHHHHHHHHHHHHHHh--CCCCeeEeecc-cC
Q psy16545 329 VYGEPQ----FLPITEDHP----------------TGNIKNFYNLGTGQGTSVLQLLRTFERVT--GNKPVPYIFYN-LG 385 (600)
Q Consensus 329 vYg~~~----~~~~~E~~~----------------~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~--~~~~~~~r~~~-~g 385 (600)
+|+... ..+++|+++ ..| .+.|+.|| ..+|.+++.+.+.+ +++++++||++ +|
T Consensus 135 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK---~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g 210 (342)
T 1y1p_A 135 SALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKS-LWVYAASK---TEAELAAWKFMDENKPHFTLNAVLPNYTIG 210 (342)
T ss_dssp GTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHH-HHHHHHHH---HHHHHHHHHHHHHHCCSSEEEEEEESEEEC
T ss_pred HhcCCCCCCCCcccCccccCchhhhhhccccccccccc-hHHHHHHH---HHHHHHHHHHHHhcCCCceEEEEcCCceEC
Confidence 996432 257888862 222 37899999 78999999998876 67788999887 54
Q ss_pred CCCcchHHHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhC
Q psy16545 386 TGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTG 465 (600)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~ 465 (600)
++..... ....+..++..+ ..+
T Consensus 211 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~~--~~~ 232 (342)
T 1y1p_A 211 TIFDPET--------------------------------------------------------QSGSTSGWMMSL--FNG 232 (342)
T ss_dssp CCSCTTT--------------------------------------------------------CCCHHHHHHHHH--HTT
T ss_pred CCCCCCC--------------------------------------------------------CCccHHHHHHHH--HcC
Confidence 4322100 000011122222 124
Q ss_pred CCCceeeccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCC-ceeEeEcCCCCCccHH
Q psy16545 466 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV-PYIFYNLGTGQGTSVL 544 (600)
Q Consensus 466 ~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~-~~~~~nl~~~~~~s~~ 544 (600)
++..+. +.+ +. ++|+| ++|+++++..++..+. .++.+ ++++..+|+.
T Consensus 233 ~~~~~~------~~~-~~----~~~v~--------------------v~Dva~a~~~~~~~~~~~g~~~-~~~g~~~s~~ 280 (342)
T 1y1p_A 233 EVSPAL------ALM-PP----QYYVS--------------------AVDIGLLHLGCLVLPQIERRRV-YGTAGTFDWN 280 (342)
T ss_dssp CCCHHH------HTC-CS----EEEEE--------------------HHHHHHHHHHHHHCTTCCSCEE-EECCEEECHH
T ss_pred CCcccc------ccC-Cc----CCEeE--------------------HHHHHHHHHHHHcCcccCCceE-EEeCCCCCHH
Confidence 443321 111 12 77888 8899999888776542 34444 3456789999
Q ss_pred HHHHHHhhhcCCcccccccCCCCCCccccccChHHHHHHcCc---eeeEEEEe
Q psy16545 545 QLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGW---SARCTVKI 594 (600)
Q Consensus 545 e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~---~p~~~l~~ 594 (600)
|+++.+.+.+|.+ .+.. +..........+|++|+++.||| .|.++++.
T Consensus 281 e~~~~i~~~~~~~-~~~~-~~~~~~~~~~~~d~~k~~~~lg~~~~~~~~~l~~ 331 (342)
T 1y1p_A 281 TVLATFRKLYPSK-TFPA-DFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEE 331 (342)
T ss_dssp HHHHHHHHHCTTS-CCCC-CCCCCCCCCCEECCHHHHHHHHHTTCCSCCCHHH
T ss_pred HHHHHHHHHCCCc-cCCC-CCCccccccccCChHHHHHHHhhcccCCcCCHHH
Confidence 9999999999864 2211 11111223467899999999987 45566653
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.7e-20 Score=190.96 Aligned_cols=184 Identities=22% Similarity=0.212 Sum_probs=144.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCc-cEEecccc-------------------cccccChHHhhhHHhhhhcccccccCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPV-PYIVEARR-------------------EGDIVSMYANTDLAQKELGWSARCTHDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~-~~~~~~~~-------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 67 (600)
.|||++|++|+.+.+..... .+. ++++++|. .+|++|.+++.+ +++ ++
T Consensus 25 lVTGatG~iG~~l~~~L~~~-~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~---------~~~--~~ 92 (344)
T 2gn4_A 25 LITGGTGSFGKCFVRKVLDT-TNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNY---------ALE--GV 92 (344)
T ss_dssp EEETTTSHHHHHHHHHHHHH-CCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHH---------HTT--TC
T ss_pred EEECCCcHHHHHHHHHHHhh-CCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHH---------HHh--cC
Confidence 58999999999996532222 022 33333332 579999998888 776 89
Q ss_pred CEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHH
Q psy16545 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKH 147 (600)
Q Consensus 68 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~ 147 (600)
|+|||+||.........++...+++|+.|+.+++++|.+.++++||++||...+ .|.++|+.||+
T Consensus 93 D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~---------------~p~~~Y~~sK~ 157 (344)
T 2gn4_A 93 DICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA---------------NPINLYGATKL 157 (344)
T ss_dssp SEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS---------------SCCSHHHHHHH
T ss_pred CEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC---------------CCccHHHHHHH
Confidence 999999998754434456778999999999999999999999999999997543 45689999999
Q ss_pred HHHHHHHHHHhhc--CCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCC-eEEEecCCcccccCcceE
Q psy16545 148 FIEEMLKDLSKAH--KEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKP-HFTVFGADYETEDGTGKV 224 (600)
Q Consensus 148 ~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~g~g~~~~~~~~v~ 224 (600)
++|.+++.++.+. .+++++++|||+||||. .++++.+.+.+. .++ ++++ .+|...|++++++
T Consensus 158 ~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~-------------~~~i~~~~~~~~-~g~~~~~i-~~~~~~r~~i~v~ 222 (344)
T 2gn4_A 158 CSDKLFVSANNFKGSSQTQFSVVRYGNVVGSR-------------GSVVPFFKKLVQ-NKASEIPI-TDIRMTRFWITLD 222 (344)
T ss_dssp HHHHHHHHGGGCCCSSCCEEEEECCCEETTCT-------------TSHHHHHHHHHH-HTCCCEEE-SCTTCEEEEECHH
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEEeccEECCC-------------CCHHHHHHHHHH-cCCCceEE-eCCCeEEeeEEHH
Confidence 9999999987642 37999999999999985 346777776665 344 6776 4788999999999
Q ss_pred Eeeeccccc
Q psy16545 225 VAIDNFVNS 233 (600)
Q Consensus 225 d~v~~~~~a 233 (600)
|+++.+..+
T Consensus 223 D~a~~v~~~ 231 (344)
T 2gn4_A 223 EGVSFVLKS 231 (344)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 988876655
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.1e-21 Score=193.77 Aligned_cols=180 Identities=16% Similarity=0.072 Sum_probs=138.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAV 76 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~ 76 (600)
.||| +|++|+++.+.. ...+.++++++|+ .+|+.|.+++.+ +++ .++|+|||+||.
T Consensus 7 lVtG-aG~iG~~l~~~L--~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~-~~~d~vih~a~~ 73 (286)
T 3gpi_A 7 LIAG-CGDLGLELARRL--TAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLAS---------IVH-LRPEILVYCVAA 73 (286)
T ss_dssp EEEC-CSHHHHHHHHHH--HHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTT---------GGG-GCCSEEEECHHH
T ss_pred EEEC-CCHHHHHHHHHH--HHCCCEEEEEeCCccccccCCceEEccCCChHHHHH---------hhc-CCCCEEEEeCCC
Confidence 4899 599999996533 2233445555554 789999998888 665 249999999987
Q ss_pred cCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q psy16545 77 KAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDL 156 (600)
Q Consensus 77 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~ 156 (600)
.. .++...+++|+.++.+|+++|++.++++||++||.++||.....+++|+++. .|.++|+.+|.++|++ +.+
T Consensus 74 ~~-----~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~-~p~~~Y~~sK~~~E~~-~~~ 146 (286)
T 3gpi_A 74 SE-----YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPP-IAKDFSGKRMLEAEAL-LAA 146 (286)
T ss_dssp HH-----HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCC-CCCSHHHHHHHHHHHH-GGG
T ss_pred CC-----CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCC-CCCChhhHHHHHHHHH-Hhc
Confidence 42 3456688999999999999999999999999999999998877889999999 8999999999999998 542
Q ss_pred HhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 157 SKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 157 ~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
++++++||+++|||... .++..+.+ +. ..++|.+.++++|++|+++.+..+
T Consensus 147 ------~~~~ilR~~~v~G~~~~------------~~~~~~~~------~~--~~~~~~~~~~~i~v~Dva~~~~~~ 197 (286)
T 3gpi_A 147 ------YSSTILRFSGIYGPGRL------------RMIRQAQT------PE--QWPARNAWTNRIHRDDGAAFIAYL 197 (286)
T ss_dssp ------SSEEEEEECEEEBTTBC------------HHHHHTTC------GG--GSCSSBCEECEEEHHHHHHHHHHH
T ss_pred ------CCeEEEecccccCCCch------------hHHHHHHh------cc--cCCCcCceeEEEEHHHHHHHHHHH
Confidence 78999999999999621 23332222 11 147889999999999998876644
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.3e-20 Score=207.94 Aligned_cols=209 Identities=14% Similarity=0.119 Sum_probs=154.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHH-hhhHHhhhhcccccccCCCCEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYA-NTDLAQKELGWSARCTHDIDCV 70 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~-~~~~~~~~~~~~~~~~~~~d~V 70 (600)
.|||++|++|+++.+..... .+.++++++|. .+|+++.++ +.+ +++ ++|+|
T Consensus 319 LVTGatG~IG~~l~~~Ll~~-~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~---------~~~--~~D~V 386 (660)
T 1z7e_A 319 LILGVNGFIGNHLTERLLRE-DHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEY---------HVK--KCDVV 386 (660)
T ss_dssp EEETTTSHHHHHHHHHHHHS-SSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHH---------HHH--HCSEE
T ss_pred EEEcCCcHHHHHHHHHHHhc-CCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHH---------hhc--CCCEE
Confidence 58999999999996532211 12334433332 568887654 555 554 79999
Q ss_pred EEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCC------CCCCChHHH
Q psy16545 71 IHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPT------GNIKNVYGK 144 (600)
Q Consensus 71 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~------~~p~s~Y~~ 144 (600)
|||||.........++...+++|+.++.+++++|++.+ ++||++||.++||.....+++|+++. ..|.+.|+.
T Consensus 387 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~ 465 (660)
T 1z7e_A 387 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSV 465 (660)
T ss_dssp EECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHH
T ss_pred EECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHH
Confidence 99999875433345677899999999999999999988 89999999999997766778888752 135668999
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceE
Q psy16545 145 TKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKV 224 (600)
Q Consensus 145 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~ 224 (600)
||.++|++++.++.+. +++++++||+++|||+........ .....+++.+...+. .+.++.++++|.+.++++|++
T Consensus 466 sK~~~E~~~~~~~~~~-gi~~~ilRpg~v~Gp~~~~~~~~~--~~~~~~~~~~~~~~~-~g~~~~~~g~g~~~~~~i~v~ 541 (660)
T 1z7e_A 466 SKQLLDRVIWAYGEKE-GLQFTLFRPFNWMGPRLDNLNAAR--IGSSRAITQLILNLV-EGSPIKLIDGGKQKRCFTDIR 541 (660)
T ss_dssp HHHHHHHHHHHHHHHH-CCCEEEEEECSEESTTSSCHHHHT--TTCSCHHHHHHHHHH-HTCCEEEEGGGCCEEECEEHH
T ss_pred HHHHHHHHHHHHHHHc-CCCEEEECCCcccCCCcccccccc--ccccchHHHHHHHHH-cCCCcEEeCCCCeEEEEEEHH
Confidence 9999999999998776 999999999999999743100000 001235555554444 345778889999999999999
Q ss_pred Eeeeccccc
Q psy16545 225 VAIDNFVNS 233 (600)
Q Consensus 225 d~v~~~~~a 233 (600)
|+++.+..+
T Consensus 542 Dva~ai~~~ 550 (660)
T 1z7e_A 542 DGIEALYRI 550 (660)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998876654
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.3e-20 Score=188.78 Aligned_cols=189 Identities=20% Similarity=0.130 Sum_probs=141.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------cccccChHHhhhHHhhhhcccccccCCCCEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------EGDIVSMYANTDLAQKELGWSARCTHDIDCV 70 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~V 70 (600)
.|||++|++|+++.+.. ...+.++++++|+ .+|++|.+++.+ +++..++|+|
T Consensus 24 lVTGasG~iG~~l~~~L--~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~---------~~~~~~~D~v 92 (330)
T 2pzm_A 24 LITGGAGCLGSNLIEHW--LPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLER---------AFDSFKPTHV 92 (330)
T ss_dssp EEETTTSHHHHHHHHHH--GGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHH---------HHHHHCCSEE
T ss_pred EEECCCCHHHHHHHHHH--HHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHH---------HHhhcCCCEE
Confidence 58999999999996533 2223334433331 579999988888 4433379999
Q ss_pred EEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCC--CCCCCCCCCCCCChHHHHHHH
Q psy16545 71 IHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL--PITEDHPTGNIKNVYGKTKHF 148 (600)
Q Consensus 71 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~--~~~E~~~~~~p~s~Y~~sK~~ 148 (600)
|||||..... +..++. +++|+.++.+++++|.+.++++||++||.++|+..... +++|++ .|.++|+.||++
T Consensus 93 ih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~---~~~~~Y~~sK~~ 166 (330)
T 2pzm_A 93 VHSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT---APFTSYGISKTA 166 (330)
T ss_dssp EECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC---CCCSHHHHHHHH
T ss_pred EECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC---CCCChHHHHHHH
Confidence 9999987543 233333 89999999999999999999999999999999865443 778876 266899999999
Q ss_pred HHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeee
Q psy16545 149 IEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAID 228 (600)
Q Consensus 149 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~ 228 (600)
+|++++.+ +++.+++||+++|||+.. ..+++.+...+. .++ .+++++. .+++++++|+++
T Consensus 167 ~e~~~~~~-----~~~~~~iR~~~v~gp~~~-----------~~~~~~~~~~~~-~~~--~~~~~~~-~~~~i~~~Dva~ 226 (330)
T 2pzm_A 167 GEAFLMMS-----DVPVVSLRLANVTGPRLA-----------IGPIPTFYKRLK-AGQ--KCFCSDT-VRDFLDMSDFLA 226 (330)
T ss_dssp HHHHHHTC-----SSCEEEEEECEEECTTCC-----------SSHHHHHHHHHH-TTC--CCCEESC-EECEEEHHHHHH
T ss_pred HHHHHHHc-----CCCEEEEeeeeeECcCCC-----------CCHHHHHHHHHH-cCC--EEeCCCC-EecceeHHHHHH
Confidence 99988764 688999999999999621 235555555443 222 4467777 889999999887
Q ss_pred -ccccc
Q psy16545 229 -NFVNS 233 (600)
Q Consensus 229 -~~~~a 233 (600)
.+..+
T Consensus 227 ~a~~~~ 232 (330)
T 2pzm_A 227 IADLSL 232 (330)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 76655
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.3e-19 Score=175.64 Aligned_cols=151 Identities=20% Similarity=0.228 Sum_probs=127.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------cccccChHHhhhHHhhhhcccccccCCCCEEEEcCc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAA 75 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~ 75 (600)
-|||++|++|+.+.+. +...+.+++.++|. .+|++|.+++.+ +++ ++|+||||||
T Consensus 7 lVTGasg~IG~~la~~--L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~--~~D~vi~~Ag 73 (267)
T 3rft_A 7 LVTGAAGQLGRVMRER--LAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNA---------MVA--GCDGIVHLGG 73 (267)
T ss_dssp EEESTTSHHHHHHHHH--TGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHH---------HHT--TCSEEEECCS
T ss_pred EEECCCCHHHHHHHHH--HHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHH---------HHc--CCCEEEECCC
Confidence 4899999999999653 33333344444443 589999999998 666 8999999999
Q ss_pred ccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCC-CCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q psy16545 76 VKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE-PQFLPITEDHPTGNIKNVYGKTKHFIEEMLK 154 (600)
Q Consensus 76 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~-~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~ 154 (600)
.. ...++...+++|+.|+.+|+++|++.++++||++||..+||. ....+++|+.+. .|.+.|+.||.++|.+++
T Consensus 74 ~~----~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~-~~~~~Y~~sK~~~e~~~~ 148 (267)
T 3rft_A 74 IS----VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPA-RPDGLYGVSKCFGENLAR 148 (267)
T ss_dssp CC----SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCC-CCCSHHHHHHHHHHHHHH
T ss_pred Cc----CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCC-CCCChHHHHHHHHHHHHH
Confidence 84 345678899999999999999999999999999999999974 345678999999 899999999999999999
Q ss_pred HHHhhcCCceEEEEecccccCCC
Q psy16545 155 DLSKAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 155 ~~~~~~~~~~~~ilR~~~v~G~~ 177 (600)
.++.++ +++++++||+.|||+.
T Consensus 149 ~~a~~~-g~~~~~vr~~~v~~~~ 170 (267)
T 3rft_A 149 MYFDKF-GQETALVRIGSCTPEP 170 (267)
T ss_dssp HHHHHH-CCCEEEEEECBCSSSC
T ss_pred HHHHHh-CCeEEEEEeecccCCC
Confidence 998887 9999999999999873
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.79 E-value=4e-20 Score=199.22 Aligned_cols=202 Identities=14% Similarity=0.089 Sum_probs=147.3
Q ss_pred cCCCCcchHHHHHHHhhhccC-CCccEEecccc------------------------------------ccccc------
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-KPVPYIVEARR------------------------------------EGDIV------ 44 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-~~~~~~~~~~~------------------------------------~~Dl~------ 44 (600)
.|||++|++|..+.+...... .+.++++++|. .+|++
T Consensus 77 LVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~gl 156 (478)
T 4dqv_A 77 LLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGL 156 (478)
T ss_dssp EEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGGC
T ss_pred EEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccCC
Confidence 589999999999965322221 12344444432 67887
Q ss_pred ChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCC
Q psy16545 45 SMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP 124 (600)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~ 124 (600)
+.+.+.+ +++ ++|+||||||.... .++...+++|+.++.+|+++|.+.++++||++||.++|+..
T Consensus 157 d~~~~~~---------~~~--~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~ 221 (478)
T 4dqv_A 157 DQPMWRR---------LAE--TVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAI 221 (478)
T ss_dssp CHHHHHH---------HHH--HCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTS
T ss_pred CHHHHHH---------HHc--CCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCcc
Confidence 4445555 555 79999999999764 45567899999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCCCCh-----------HHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCC-CCCCCCCCCcccc
Q psy16545 125 QFLPITEDHPTGNIKNV-----------YGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPS-GRIGEDPTKSFTN 192 (600)
Q Consensus 125 ~~~~~~E~~~~~~p~s~-----------Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~ 192 (600)
...+++|+.+. .|.++ |+.||+++|++++.++.+. +++++++||++|||++.. +.+ ....
T Consensus 222 ~~~~~~E~~~~-~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ivRpg~v~G~~~~~g~~------~~~~ 293 (478)
T 4dqv_A 222 EPSAFTEDADI-RVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC-ALPVAVFRCGMILADTSYAGQL------NMSD 293 (478)
T ss_dssp CTTTCCSSSCH-HHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEECCSSSSSCC------CTTB
T ss_pred CCCCcCCcccc-cccCcccccccccccchHHHHHHHHHHHHHHHHHh-CCCeEEEECceeeCCCccCCcC------CHHH
Confidence 77788888776 55444 9999999999999998876 999999999999999642 111 1133
Q ss_pred hhHHHHHhhcCCCCeEEE--e---cCC---cccccCcceEEeeeccccc
Q psy16545 193 IMPYLAQVAIGSKPHFTV--F---GAD---YETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 193 ~~~~~~~~~~~~~~~~~v--~---g~g---~~~~~~~~v~d~v~~~~~a 233 (600)
++..+....... ..++. + ++| .+.++++|++|+++.+..+
T Consensus 294 ~~~~l~~~~~~~-g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~ 341 (478)
T 4dqv_A 294 WVTRMVLSLMAT-GIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVL 341 (478)
T ss_dssp HHHHHHHHHHHH-CEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CcccccccccccccccccceeeeeeHHHHHHHHHHH
Confidence 555555444322 12221 1 122 6788999999999877655
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-19 Score=180.23 Aligned_cols=184 Identities=16% Similarity=0.061 Sum_probs=144.8
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc-------cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGE 81 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~ 81 (600)
|||++|++|+++.+.. .. +.++++++|+ .+|++|++++.+ +++..++|+||||||......
T Consensus 5 VtGatG~iG~~l~~~L--~~-g~~V~~~~r~~~~~~~~~~Dl~~~~~~~~---------~~~~~~~d~vi~~a~~~~~~~ 72 (273)
T 2ggs_A 5 ITGASGQLGIELSRLL--SE-RHEVIKVYNSSEIQGGYKLDLTDFPRLED---------FIIKKRPDVIINAAAMTDVDK 72 (273)
T ss_dssp EETTTSHHHHHHHHHH--TT-TSCEEEEESSSCCTTCEECCTTSHHHHHH---------HHHHHCCSEEEECCCCCCHHH
T ss_pred EECCCChhHHHHHHHH--hc-CCeEEEecCCCcCCCCceeccCCHHHHHH---------HHHhcCCCEEEECCcccChhh
Confidence 7999999999996643 32 4667767775 389999999888 554335999999999875443
Q ss_pred CCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q psy16545 82 SMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHK 161 (600)
Q Consensus 82 ~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~ 161 (600)
...++...+++|+.++.+++++|++.++ +||++||.++|+... .+++|+++. .|.++|+.||.++|++++.
T Consensus 73 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~-~~~~e~~~~-~~~~~Y~~sK~~~e~~~~~------ 143 (273)
T 2ggs_A 73 CEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEK-GNYKEEDIP-NPINYYGLSKLLGETFALQ------ 143 (273)
T ss_dssp HHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSS-CSBCTTSCC-CCSSHHHHHHHHHHHHHCC------
T ss_pred hhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCC-CCcCCCCCC-CCCCHHHHHHHHHHHHHhC------
Confidence 4467788999999999999999999887 999999999998654 488999998 8899999999999998865
Q ss_pred CceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeecccc
Q psy16545 162 EWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVN 232 (600)
Q Consensus 162 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~ 232 (600)
++.+++||+.+||+ +.+.+.+...+. .++++.++++ .+++++++|+++.+..
T Consensus 144 -~~~~~iR~~~v~G~--------------~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~dva~~i~~ 195 (273)
T 2ggs_A 144 -DDSLIIRTSGIFRN--------------KGFPIYVYKTLK-EGKTVFAFKG---YYSPISARKLASAILE 195 (273)
T ss_dssp -TTCEEEEECCCBSS--------------SSHHHHHHHHHH-TTCCEEEESC---EECCCBHHHHHHHHHH
T ss_pred -CCeEEEeccccccc--------------cHHHHHHHHHHH-cCCCEEeecC---CCCceEHHHHHHHHHH
Confidence 35689999999983 225555545444 3456676665 7889999998875543
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.7e-20 Score=177.38 Aligned_cols=185 Identities=12% Similarity=0.034 Sum_probs=137.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------cccccChHHhhhHHhhhhcccccccCCCCEEEEc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHF 73 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~ 73 (600)
.|||++|++|+.+.+. +...+.++++++|+ .+|++|.+++.+ +++ ++|+|||+
T Consensus 8 lItGatG~iG~~l~~~--L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~--~~d~vi~~ 74 (227)
T 3dhn_A 8 VLIGASGFVGSALLNE--ALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCE---------VCK--GADAVISA 74 (227)
T ss_dssp EEETCCHHHHHHHHHH--HHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHH---------HHT--TCSEEEEC
T ss_pred EEEcCCchHHHHHHHH--HHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHH---------Hhc--CCCEEEEe
Confidence 5899999999999553 33334455555554 679999999988 776 79999999
Q ss_pred CcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q psy16545 74 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEML 153 (600)
Q Consensus 74 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~ 153 (600)
|+... .+ ...+++|+.++.+++++|++.++++||++||.++|+... ....|+.+. .|.++|+.+|..+|.++
T Consensus 75 a~~~~-----~~-~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~-~~~~~~~~~-~p~~~Y~~sK~~~e~~~ 146 (227)
T 3dhn_A 75 FNPGW-----NN-PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAP-GLRLMDSGE-VPENILPGVKALGEFYL 146 (227)
T ss_dssp CCC------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEET-TEEGGGTTC-SCGGGHHHHHHHHHHHH
T ss_pred CcCCC-----CC-hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCC-CCccccCCc-chHHHHHHHHHHHHHHH
Confidence 98652 12 237889999999999999999999999999998775433 234556677 78899999999999999
Q ss_pred HHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 154 KDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 154 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
+.+.++. +++++++||+++|||.... ..+. .+...++ ..+++ +++++++|+++.+..+
T Consensus 147 ~~~~~~~-~~~~~ilrp~~v~g~~~~~----------~~~~-------~~~~~~~-~~~~~---~~~i~~~Dva~ai~~~ 204 (227)
T 3dhn_A 147 NFLMKEK-EIDWVFFSPAADMRPGVRT----------GRYR-------LGKDDMI-VDIVG---NSHISVEDYAAAMIDE 204 (227)
T ss_dssp HTGGGCC-SSEEEEEECCSEEESCCCC----------CCCE-------EESSBCC-CCTTS---CCEEEHHHHHHHHHHH
T ss_pred HHHhhcc-CccEEEEeCCcccCCCccc----------ccee-------ecCCCcc-cCCCC---CcEEeHHHHHHHHHHH
Confidence 9888765 9999999999999996431 1110 1222222 12333 8899999999887766
Q ss_pred cc
Q psy16545 234 VH 235 (600)
Q Consensus 234 ~~ 235 (600)
+.
T Consensus 205 l~ 206 (227)
T 3dhn_A 205 LE 206 (227)
T ss_dssp HH
T ss_pred Hh
Confidence 54
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-19 Score=185.84 Aligned_cols=187 Identities=16% Similarity=0.093 Sum_probs=138.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------cccccChHHhhhHHhhhhcccccccCCCCEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------EGDIVSMYANTDLAQKELGWSARCTHDIDCV 70 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~V 70 (600)
.|||++|++|+++.+... ..+.++++++|. .+|++|.+++.+ +++..++|+|
T Consensus 25 lVTGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~---------~~~~~~~D~v 93 (333)
T 2q1w_A 25 FITGICGQIGSHIAELLL--ERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQ---------LIGDLQPDAV 93 (333)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHH---------HHHHHCCSEE
T ss_pred EEeCCccHHHHHHHHHHH--HCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHH---------HHhccCCcEE
Confidence 589999999999965322 122233333321 579999988888 5552349999
Q ss_pred EEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccC----CCCCCCCCCCCCCCCCC-ChHHHH
Q psy16545 71 IHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG----EPQFLPITEDHPTGNIK-NVYGKT 145 (600)
Q Consensus 71 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg----~~~~~~~~E~~~~~~p~-s~Y~~s 145 (600)
|||||..... ...++. +++|+.++.+|+++|.+.++++||++||.++|| .... +++|++ . |. ++|+.|
T Consensus 94 ih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~-~--p~~~~Y~~s 166 (333)
T 2q1w_A 94 VHTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR-N--PANSSYAIS 166 (333)
T ss_dssp EECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC-C--CTTCHHHHH
T ss_pred EECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC-C--CCCCchHHH
Confidence 9999987543 223333 899999999999999999999999999999998 5444 788887 3 55 899999
Q ss_pred HHHHHHHHHH-HHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceE
Q psy16545 146 KHFIEEMLKD-LSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKV 224 (600)
Q Consensus 146 K~~~e~~~~~-~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~ 224 (600)
|.++|++++. ++ +++++||+++|||+.. ..+++.+.+.+. .++ .+++ +.+.+++++++
T Consensus 167 K~~~E~~~~~s~~------~~~ilR~~~v~gp~~~-----------~~~~~~~~~~~~-~~~--~~~~-~~~~~~~i~v~ 225 (333)
T 2q1w_A 167 KSANEDYLEYSGL------DFVTFRLANVVGPRNV-----------SGPLPIFFQRLS-EGK--KCFV-TKARRDFVFVK 225 (333)
T ss_dssp HHHHHHHHHHHTC------CEEEEEESEEESTTCC-----------SSHHHHHHHHHH-TTC--CCEE-EECEECEEEHH
T ss_pred HHHHHHHHHhhhC------CeEEEeeceEECcCCc-----------CcHHHHHHHHHH-cCC--eeeC-CCceEeeEEHH
Confidence 9999999987 53 6799999999999621 235665555443 223 3466 77889999999
Q ss_pred Eeeeccccc
Q psy16545 225 VAIDNFVNS 233 (600)
Q Consensus 225 d~v~~~~~a 233 (600)
|+++.+..+
T Consensus 226 Dva~ai~~~ 234 (333)
T 2q1w_A 226 DLARATVRA 234 (333)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 988765544
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.78 E-value=6.8e-20 Score=191.02 Aligned_cols=178 Identities=15% Similarity=0.118 Sum_probs=147.4
Q ss_pred CCCCcchHHHHHHHhhhccCCCc-cEEecccccccc-cChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCCh
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPV-PYIVEARREGDI-VSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEP 86 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~-~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~ 86 (600)
|||++|++|+++.+ ++...+. +++ .+|+ .|.+++.+ +++ ++|+|||+||.... .++
T Consensus 5 VtGatG~iG~~l~~--~L~~~g~~~v~-----~~d~~~d~~~l~~---------~~~--~~d~Vih~a~~~~~----~~~ 62 (369)
T 3st7_A 5 ITGAKGFVGKNLKA--DLTSTTDHHIF-----EVHRQTKEEELES---------ALL--KADFIVHLAGVNRP----EHD 62 (369)
T ss_dssp EETTTSHHHHHHHH--HHHHHCCCEEE-----ECCTTCCHHHHHH---------HHH--HCSEEEECCCSBCT----TCS
T ss_pred EECCCCHHHHHHHH--HHHhCCCCEEE-----EECCCCCHHHHHH---------Hhc--cCCEEEECCcCCCC----CCH
Confidence 79999999999965 3333344 888 7787 88898888 666 79999999998753 355
Q ss_pred hhhHHhHHHHHHHHHHHHHHcCCC-eEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceE
Q psy16545 87 LMYYKNNLIATINLLEVMKSHGVY-QLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNI 165 (600)
Q Consensus 87 ~~~~~~Nv~gt~~ll~a~~~~~~~-r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~ 165 (600)
...+++|+.++.+|+++|++.+++ +||++||..+|+ .++|+.+|.++|++++.++++. ++++
T Consensus 63 ~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~----------------~~~Y~~sK~~~E~~~~~~~~~~-g~~~ 125 (369)
T 3st7_A 63 KEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ----------------DNPYGESKLQGEQLLREYAEEY-GNTV 125 (369)
T ss_dssp TTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS----------------CSHHHHHHHHHHHHHHHHHHHH-CCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC----------------CCCchHHHHHHHHHHHHHHHHh-CCCE
Confidence 668899999999999999999987 999999998876 3799999999999999998887 8999
Q ss_pred EEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccccc
Q psy16545 166 ISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVH 235 (600)
Q Consensus 166 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a~~ 235 (600)
+++||+++|||+..+.+ +++++.+.+.+. .++++.+ ++|.+.++++|++|+++.+..++.
T Consensus 126 ~i~R~~~v~G~~~~~~~--------~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~ 185 (369)
T 3st7_A 126 YIYRWPNLFGKWCKPNY--------NSVIATFCYKIA-RNEEIQV-NDRNVELTLNYVDDIVAEIKRAIE 185 (369)
T ss_dssp EEEEECEEECTTCCTTS--------SCHHHHHHHHHH-TTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHH
T ss_pred EEEECCceeCCCCCCCc--------chHHHHHHHHHH-cCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHh
Confidence 99999999999765432 467887777666 4456664 689999999999999988876654
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.6e-18 Score=169.62 Aligned_cols=149 Identities=21% Similarity=0.221 Sum_probs=125.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------cccccChHHhhhHHhhhhcccccccCCCCEEEEcCc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAA 75 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~ 75 (600)
.|||++|++|+.+.+ .+...+.++++++|+ .+|++|.+.+.+ +++ ++|+||||||
T Consensus 6 lVtGatG~iG~~l~~--~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~--~~d~vi~~a~ 72 (267)
T 3ay3_A 6 LVTGAAGGVGSAIRP--HLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHD---------LVK--DCDGIIHLGG 72 (267)
T ss_dssp EEESTTSHHHHHHGG--GGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHH---------HHT--TCSEEEECCS
T ss_pred EEECCCCHHHHHHHH--HHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHH---------HHc--CCCEEEECCc
Confidence 489999999999955 444444556655554 379999988888 666 7999999999
Q ss_pred ccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCC-CCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q psy16545 76 VKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP-QFLPITEDHPTGNIKNVYGKTKHFIEEMLK 154 (600)
Q Consensus 76 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~-~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~ 154 (600)
... ..++...+++|+.++.+++++|++.++++||++||..+|+.. ...+++|+++. .|.++|+.||.++|.+++
T Consensus 73 ~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~-~~~~~Y~~sK~~~e~~~~ 147 (267)
T 3ay3_A 73 VSV----ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPR-RPDSLYGLSKCFGEDLAS 147 (267)
T ss_dssp CCS----CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCC-CCCSHHHHHHHHHHHHHH
T ss_pred CCC----CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCC-CCCChHHHHHHHHHHHHH
Confidence 762 355678999999999999999999999999999999999864 35689999999 899999999999999999
Q ss_pred HHHhhcCCceEEEEecccccC
Q psy16545 155 DLSKAHKEWNIISLRYFNPVG 175 (600)
Q Consensus 155 ~~~~~~~~~~~~ilR~~~v~G 175 (600)
.+..+. +++++++||+++|+
T Consensus 148 ~~~~~~-gi~~~~lrp~~v~~ 167 (267)
T 3ay3_A 148 LYYHKF-DIETLNIRIGSCFP 167 (267)
T ss_dssp HHHHTT-CCCEEEEEECBCSS
T ss_pred HHHHHc-CCCEEEEeceeecC
Confidence 887765 99999999999994
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.5e-19 Score=186.83 Aligned_cols=201 Identities=15% Similarity=0.094 Sum_probs=143.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------------------cccccChHHhhhHHh
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------------------EGDIVSMYANTDLAQ 54 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------------~~Dl~~~~~~~~~~~ 54 (600)
.|||++|++|+.+.+.. ...+.++++++|. .+|+.+++.+..
T Consensus 73 lVTGatG~iG~~l~~~L--~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~--- 147 (427)
T 4f6c_A 73 LLTGATGFLGAYLIEAL--QGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVL--- 147 (427)
T ss_dssp EEECTTSHHHHHHHHHH--TTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCCC---
T ss_pred EEecCCcHHHHHHHHHH--HcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCCC---
Confidence 58999999999996533 3344455544443 345555443331
Q ss_pred hhhcccccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCC-----CCCCCC
Q psy16545 55 KELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE-----PQFLPI 129 (600)
Q Consensus 55 ~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~-----~~~~~~ 129 (600)
..++|+||||||.... ..++...+++|+.++.+++++|.+ ++++||++||..+ |. ....++
T Consensus 148 ---------~~~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~ 213 (427)
T 4f6c_A 148 ---------PENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTF 213 (427)
T ss_dssp ---------SSCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEE
T ss_pred ---------cCCCCEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCccc
Confidence 1379999999998753 345677999999999999999999 7789999999988 53 234577
Q ss_pred CCCCC---CCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCC
Q psy16545 130 TEDHP---TGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKP 206 (600)
Q Consensus 130 ~E~~~---~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (600)
+|+++ . .+.+.|+.||+++|++++.+++ . +++++++|||+||||+..+.+..+. ...+++.+.+... ..+
T Consensus 214 ~E~~~~~~~-~~~~~Y~~sK~~~E~~~~~~~~-~-g~~~~ivRpg~v~G~~~~~~~~~~~---~~~~~~~~~~~~~-~~~ 286 (427)
T 4f6c_A 214 SEADVYKGQ-LLTSPYTRSKFYSELKVLEAVN-N-GLDGRIVRVGNLTSPYNGRWHMRNI---KTNRFSMVMNDLL-QLD 286 (427)
T ss_dssp CTTCSCSSC-CCCSHHHHHHHHHHHHHHHHHH-T-TCCEEEEEECCEESCSSSCCCCTTG---GGCHHHHHHHHHH-HSS
T ss_pred cccccccCC-CCCCchHHHHHHHHHHHHHHHH-c-CCCEEEEeCCeeecCCCCCccccCc---chHHHHHHHHHHH-hcC
Confidence 88877 4 5789999999999999999865 3 8999999999999998654432221 1334555555554 335
Q ss_pred eEEEecCCcccccCcceEEeeeccccccc
Q psy16545 207 HFTVFGADYETEDGTGKVVAIDNFVNSVH 235 (600)
Q Consensus 207 ~~~v~g~g~~~~~~~~v~d~v~~~~~a~~ 235 (600)
.++. ++|.+.+++++++|+++.+..++.
T Consensus 287 ~~~~-~~~~~~~~~v~v~DvA~ai~~~~~ 314 (427)
T 4f6c_A 287 CIGV-SMAEMPVDFSFVDTTARQIVALAQ 314 (427)
T ss_dssp EEEH-HHHTCEECCEEHHHHHHHHHHHTT
T ss_pred CCCC-ccccceEEEeeHHHHHHHHHHHHc
Confidence 6664 567899999999999988776644
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-18 Score=189.18 Aligned_cols=201 Identities=15% Similarity=0.104 Sum_probs=144.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------------------cccccChHHhhhHHh
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------------------EGDIVSMYANTDLAQ 54 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------------~~Dl~~~~~~~~~~~ 54 (600)
.|||++|++|+.+.+ .+...+.++++++|. .+|+.+++.+..
T Consensus 154 LVTGatG~iG~~l~~--~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~--- 228 (508)
T 4f6l_B 154 LLTGATGFLGAYLIE--ALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVL--- 228 (508)
T ss_dssp EESCTTSHHHHHHHH--HTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCCC---
T ss_pred EEECCccchHHHHHH--HHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCCC---
Confidence 589999999999955 334444555544443 345555443321
Q ss_pred hhhcccccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCC-----CCCCCC
Q psy16545 55 KELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE-----PQFLPI 129 (600)
Q Consensus 55 ~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~-----~~~~~~ 129 (600)
..++|+||||||.... ..++...+++|+.++.+|+++|++ +.++|||+||.++ |. ....++
T Consensus 229 ---------~~~~D~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~ 294 (508)
T 4f6l_B 229 ---------PENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTF 294 (508)
T ss_dssp ---------SSCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEE
T ss_pred ---------ccCCCEEEECCceecC---CCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCccc
Confidence 1379999999998753 345667899999999999999999 6689999999998 43 234567
Q ss_pred CCCCC---CCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCC
Q psy16545 130 TEDHP---TGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKP 206 (600)
Q Consensus 130 ~E~~~---~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (600)
+|+++ . .+.+.|+.||+.+|++++.+.+ . |++++++||++|||++..+.+..+. ...+++.+.+.+. ..+
T Consensus 295 ~E~~~~~~~-~~~~~Y~~sK~~~E~~~~~~~~-~-gi~~~ilRp~~v~G~~~~~~~~~~~---~~~~~~~~i~~~~-~~~ 367 (508)
T 4f6l_B 295 SEADVYKGQ-LLTSPYTRSKFYSELKVLEAVN-N-GLDGRIVRVGNLTSPYNGRWHMRNI---KTNRFSMVMNDLL-QLD 367 (508)
T ss_dssp CTTCSCSSB-CCCSHHHHHHHHHHHHHHHHHH-T-TCEEEEEEECCEESCSSSCCCCTTC---TTCHHHHHHHHHT-TCS
T ss_pred ccccccccc-cCCCcHHHHHHHHHHHHHHHHH-c-CCCEEEEecceeccCCCCCcccCCc---chHHHHHHHHHHH-HcC
Confidence 88876 4 4789999999999999999865 3 9999999999999998654432221 1335666666555 445
Q ss_pred eEEEecCCcccccCcceEEeeeccccccc
Q psy16545 207 HFTVFGADYETEDGTGKVVAIDNFVNSVH 235 (600)
Q Consensus 207 ~~~v~g~g~~~~~~~~v~d~v~~~~~a~~ 235 (600)
.++. ++|.+.+++++++|+++.+..++.
T Consensus 368 ~~~~-~~g~~~~~~v~v~DvA~ai~~~~~ 395 (508)
T 4f6l_B 368 CIGV-SMAEMPVDFSFVDTTARQIVALAQ 395 (508)
T ss_dssp EEET-TGGGSEEECEEHHHHHHHHHHHTT
T ss_pred CCCC-CccCceEEEEcHHHHHHHHHHHHh
Confidence 6663 667899999999999988776644
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=6.9e-19 Score=180.95 Aligned_cols=156 Identities=17% Similarity=0.100 Sum_probs=114.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
.|||++|++|+++.+... ..+.+++++.|+ .+|++|.+++.+ +++
T Consensus 9 lVTGatGfIG~~l~~~L~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~- 76 (337)
T 2c29_D 9 CVTGASGFIGSWLVMRLL--ERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDE---------AIK- 76 (337)
T ss_dssp EETTTTSHHHHHHHHHHH--HTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHH---------HHT-
T ss_pred EEECCchHHHHHHHHHHH--HCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHH---------HHc-
Confidence 489999999999965322 122222221111 568888877777 665
Q ss_pred CCCCEEEEcCcccCcccCCCChh-hhHHhHHHHHHHHHHHHHHcC-CCeEEEecCcc-ccCCCC-CCCCCCCCCCC----
Q psy16545 65 HDIDCVIHFAAVKAVGESMQEPL-MYYKNNLIATINLLEVMKSHG-VYQLVFSSSCT-VYGEPQ-FLPITEDHPTG---- 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~~~~~-~~~~~Nv~gt~~ll~a~~~~~-~~r~I~~SS~~-vyg~~~-~~~~~E~~~~~---- 136 (600)
++|+|||+|+.... ...++. ..+++|+.||.+|+++|++.+ ++|||++||.+ +|+... ..+++|+.+..
T Consensus 77 -~~d~Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~ 153 (337)
T 2c29_D 77 -GCTGVFHVATPMDF--ESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFC 153 (337)
T ss_dssp -TCSEEEECCCCCCS--SCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHH
T ss_pred -CCCEEEEeccccCC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhh
Confidence 79999999987521 223333 589999999999999999887 89999999987 455432 23467775320
Q ss_pred ----CCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCC
Q psy16545 137 ----NIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPS 179 (600)
Q Consensus 137 ----~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~ 179 (600)
.+.++|+.||.++|++++.+.+++ +++++++||++||||...
T Consensus 154 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~~lrp~~v~Gp~~~ 199 (337)
T 2c29_D 154 RAKKMTAWMYFVSKTLAEQAAWKYAKEN-NIDFITIIPTLVVGPFIM 199 (337)
T ss_dssp HHHCCTTHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEECEEESCCSC
T ss_pred cccCCccchHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCceECCCCC
Confidence 145689999999999999887766 999999999999999643
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.6e-19 Score=191.59 Aligned_cols=231 Identities=15% Similarity=0.108 Sum_probs=153.0
Q ss_pred EEeecCChhhHHHHhhcCCccEEEEcccccCcc-ccccChHHHHHHHHHHHHHHHHH-HHHcCCCEEEEecCccccc-CC
Q psy16545 257 YSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVG-ESMQEPLMYYKNNLIATINLLEV-MKSHGVYQLVFSSSCTVYG-EP 333 (600)
Q Consensus 257 i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~-~~~~~~~~~~~~Nv~gt~~ll~~-~~~~~~~r~v~~SS~~vYg-~~ 333 (600)
+.+|+.+. +.+.+. ++|+|||+|+..... ....++...++.|+.++.+|+++ +++.++++|||+||.++|| ..
T Consensus 187 v~~d~~~~--~~~~l~--~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~ 262 (516)
T 3oh8_A 187 RFWDPLNP--ASDLLD--GADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDR 262 (516)
T ss_dssp EECCTTSC--CTTTTT--TCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEE
T ss_pred eeecccch--hHHhcC--CCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCC
Confidence 45566543 344455 799999999975432 23456678899999999999999 5666889999999999999 55
Q ss_pred CCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEE
Q psy16545 334 QFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIF 412 (600)
Q Consensus 334 ~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~ 412 (600)
...+++|+.+. + .+.|+.+| ...|.++.. ....+++++++||++ +|++++ .+ ..+
T Consensus 263 ~~~~~~E~~~~-~-~~~y~~~~---~~~E~~~~~-~~~~gi~~~ilRp~~v~Gp~~~-~~----~~~------------- 318 (516)
T 3oh8_A 263 GDEILTEESES-G-DDFLAEVC---RDWEHATAP-ASDAGKRVAFIRTGVALSGRGG-ML----PLL------------- 318 (516)
T ss_dssp EEEEECTTSCC-C-SSHHHHHH---HHHHHTTHH-HHHTTCEEEEEEECEEEBTTBS-HH----HHH-------------
T ss_pred CCCccCCCCCC-C-cChHHHHH---HHHHHHHHH-HHhCCCCEEEEEeeEEECCCCC-hH----HHH-------------
Confidence 55678999886 4 47899888 667776654 456799999999987 555432 11 110
Q ss_pred eeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhh
Q psy16545 413 YNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFER 492 (600)
Q Consensus 413 ~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~ 492 (600)
...+. .+.... . +++.+. ++|+|
T Consensus 319 --------------------------------------------~~~~~--~g~~~~-----~--g~g~~~----~~~i~ 341 (516)
T 3oh8_A 319 --------------------------------------------KTLFS--TGLGGK-----F--GDGTSW----FSWIA 341 (516)
T ss_dssp --------------------------------------------HHTTC-----CCC-----C--TTSCCE----ECEEE
T ss_pred --------------------------------------------HHHHH--hCCCcc-----c--CCCCce----EceEe
Confidence 00000 011111 1 334433 88888
Q ss_pred hcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCC-----C
Q psy16545 493 VTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----E 567 (600)
Q Consensus 493 v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~-----~ 567 (600)
++|+++++..++.++...++||+++++.+|+.|+++.+++.+|.+..+ ..|.. .
T Consensus 342 --------------------v~Dva~ai~~~l~~~~~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~-~~p~~~~~~~~ 400 (516)
T 3oh8_A 342 --------------------IDDLTDIYYRAIVDAQISGPINAVAPNPVSNADMTKILATSMHRPAFI-QIPSLGPKILL 400 (516)
T ss_dssp --------------------HHHHHHHHHHHHHCTTCCEEEEESCSCCEEHHHHHHHTTC--------------------
T ss_pred --------------------HHHHHHHHHHHHhCcccCCcEEEECCCCCCHHHHHHHHHHHhCCCCCC-CCCHHHHHHHh
Confidence 999999999998776567799999999999999999999999976422 22211 1
Q ss_pred CCc-------cccccChHHHHHHcCceeeEE-EEe
Q psy16545 568 GDI-------VSMYANTDLAQRELGWSARCT-VKI 594 (600)
Q Consensus 568 ~~~-------~~~~~d~~k~~~~lG~~p~~~-l~~ 594 (600)
++. ....++++|+++ |||+|+++ ++.
T Consensus 401 g~~~~~~~~~~~~~~~~~kl~~-lG~~~~~~~l~e 434 (516)
T 3oh8_A 401 GSQGAEELALASQRTAPAALEN-LSHTFRYTDIGA 434 (516)
T ss_dssp --CCGGGGGGCEEEECCHHHHH-TTCCCSCSSHHH
T ss_pred CCchhHHHhhcCCeechHHHHH-CCCCCCCCCHHH
Confidence 111 234568899995 99999987 643
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.76 E-value=3.9e-19 Score=185.29 Aligned_cols=225 Identities=12% Similarity=0.134 Sum_probs=165.6
Q ss_pred hhhCCce-eEEEeec-CChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEe
Q psy16545 248 QFTGKKV-DFYSCDL-VDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY-QLVFS 324 (600)
Q Consensus 248 ~l~~~~v-~~i~~Dl-~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~-r~v~~ 324 (600)
.+...+. +++.+|+ .+++.+.++++ ++|+|||+|+.... .++...++.|+.++.+++++|++.+++ ||||+
T Consensus 19 ~L~~~g~~~v~~~d~~~d~~~l~~~~~--~~d~Vih~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~ 92 (369)
T 3st7_A 19 DLTSTTDHHIFEVHRQTKEEELESALL--KADFIVHLAGVNRP----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLS 92 (369)
T ss_dssp HHHHHCCCEEEECCTTCCHHHHHHHHH--HCSEEEECCCSBCT----TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEE
T ss_pred HHHhCCCCEEEEECCCCCHHHHHHHhc--cCCEEEECCcCCCC----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 3333344 8899999 99999999998 79999999997543 355667889999999999999999987 99999
Q ss_pred cCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHh
Q psy16545 325 SSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVT 403 (600)
Q Consensus 325 SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~ 403 (600)
||.++|+ .++|+.+| ..+|.+++.+.+..+++++++||++ +|+++......
T Consensus 93 Ss~~~~~----------------~~~Y~~sK---~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~--------- 144 (369)
T 3st7_A 93 SSIQATQ----------------DNPYGESK---LQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNS--------- 144 (369)
T ss_dssp EEGGGGS----------------CSHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSC---------
T ss_pred CchhhcC----------------CCCchHHH---HHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcch---------
Confidence 9999997 27899999 8899999999999999999999987 55433221000
Q ss_pred CCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccc
Q psy16545 404 GNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSV 483 (600)
Q Consensus 404 g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 483 (600)
.+..++..+. .+.++.+ +++++ .
T Consensus 145 ------------------------------------------------~~~~~~~~~~--~~~~~~~-----~~~~~--~ 167 (369)
T 3st7_A 145 ------------------------------------------------VIATFCYKIA--RNEEIQV-----NDRNV--E 167 (369)
T ss_dssp ------------------------------------------------HHHHHHHHHH--TTCCCCC-----SCTTC--E
T ss_pred ------------------------------------------------HHHHHHHHHH--cCCCeEe-----cCCCe--E
Confidence 0111222221 2455443 22333 3
Q ss_pred hhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCc--eeEeEcCCCCCccHHHHHHHHhhhcCCccccc
Q psy16545 484 LQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP--YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYI 561 (600)
Q Consensus 484 ~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~--~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~ 561 (600)
++|+| ++|+++++..++..+.. +++||+++++.+|+.|+++.+++.+|.+.++.
T Consensus 168 ----~~~i~--------------------v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~~~~~ 223 (369)
T 3st7_A 168 ----LTLNY--------------------VDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRT 223 (369)
T ss_dssp ----EEEEE--------------------HHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred ----EEEEE--------------------HHHHHHHHHHHHhCCcccCCceEEeCCCCceeHHHHHHHHHHHhCCCcccc
Confidence 78888 99999999999877655 79999999999999999999999999765544
Q ss_pred ccCCCCCCccccccChHHHHHHcCceeeEEEE
Q psy16545 562 VEARREGDIVSMYANTDLAQRELGWSARCTVK 593 (600)
Q Consensus 562 ~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~ 593 (600)
..+.. +. ..-......+||.|..+++
T Consensus 224 ~~~~~--~~----~~~~l~~~~l~~~p~~~~~ 249 (369)
T 3st7_A 224 LPKLD--NL----FEKDLYSTYLSYLPSTDFS 249 (369)
T ss_dssp CCCTT--SH----HHHHHHHHHHHTSCTTCSC
T ss_pred cCCCC--CH----HHHHHHHHHhcccCCccee
Confidence 32221 11 1113444458998877654
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.4e-18 Score=182.56 Aligned_cols=132 Identities=14% Similarity=0.128 Sum_probs=110.6
Q ss_pred HhhhCCceeEEEeecC------ChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCE
Q psy16545 247 EQFTGKKVDFYSCDLV------DKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQ 320 (600)
Q Consensus 247 ~~l~~~~v~~i~~Dl~------~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r 320 (600)
......+++++.+|+. +.+.+.++++ ++|+|||+|+.... .++...++.|+.++.+++++|++.++++
T Consensus 135 ~~~~~~~v~~v~~Dl~~~~~gld~~~~~~~~~--~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~ 208 (478)
T 4dqv_A 135 KELAADRLEVVAGDKSEPDLGLDQPMWRRLAE--TVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKP 208 (478)
T ss_dssp HHHHTTTEEEEECCTTSGGGGCCHHHHHHHHH--HCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCC
T ss_pred hhhccCceEEEEeECCCcccCCCHHHHHHHHc--CCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 3344578999999998 5667888887 78999999998654 4555678999999999999999999999
Q ss_pred EEEecCcccccCCCCCCCCCCCCCCCC----------CcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCC
Q psy16545 321 LVFSSSCTVYGEPQFLPITEDHPTGNI----------KNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTG 387 (600)
Q Consensus 321 ~v~~SS~~vYg~~~~~~~~E~~~~~~~----------~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~ 387 (600)
|||+||.+||+.....+++|+.+..|. .+.|+.|| ..+|.+++.+.+..+++++++||++ +|++
T Consensus 209 ~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK---~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~ 283 (478)
T 4dqv_A 209 FTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSK---WAGEVLLREANDLCALPVAVFRCGMILADT 283 (478)
T ss_dssp EEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHH---HHHHHHHHHHHHHHCCCEEEEEECEEECCS
T ss_pred EEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHH---HHHHHHHHHHHHHhCCCeEEEECceeeCCC
Confidence 999999999998777788888765432 13499999 8899999999988899999999988 5553
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-18 Score=177.74 Aligned_cols=196 Identities=12% Similarity=0.074 Sum_probs=130.7
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccc-c-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEAR-R-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~-~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
|||++|++|+++.+.. ...+.++++++| + .+|++|.+++.+ +++
T Consensus 6 VTGatG~iG~~l~~~L--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~- 73 (322)
T 2p4h_X 6 VTGGTGFLGSWIIKSL--LENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAA---------AIE- 73 (322)
T ss_dssp EESTTSHHHHHHHHHH--HHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHH---------HHT-
T ss_pred EECChhHHHHHHHHHH--HHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHH---------HHc-
Confidence 8999999999996532 223333433333 1 468888888877 666
Q ss_pred CCCCEEEEcCcccCcccCCCCh-hhhHHhHHHHHHHHHHHHHHc-CCCeEEEecCccc-cCCCC-CCCCCCCCCCC----
Q psy16545 65 HDIDCVIHFAAVKAVGESMQEP-LMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTV-YGEPQ-FLPITEDHPTG---- 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~~~~-~~~~~~Nv~gt~~ll~a~~~~-~~~r~I~~SS~~v-yg~~~-~~~~~E~~~~~---- 136 (600)
++|+|||+|+... ....++ ..++++|+.|+.+++++|.+. ++++||++||.++ |+... ..+++|+++..
T Consensus 74 -~~d~vih~A~~~~--~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~ 150 (322)
T 2p4h_X 74 -GCVGIFHTASPID--FAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLL 150 (322)
T ss_dssp -TCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHH
T ss_pred -CCCEEEEcCCccc--CCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhh
Confidence 7899999997542 222332 348999999999999999988 7899999999874 44322 23567775420
Q ss_pred ---CCCC-hHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEec
Q psy16545 137 ---NIKN-VYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG 212 (600)
Q Consensus 137 ---~p~s-~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g 212 (600)
.|.+ +|+.||.++|++++++.+++ +++++++||++||||.....+ ...+..+.+...+.... ++
T Consensus 151 ~~~~p~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~~lrp~~v~g~~~~~~~--------~~~~~~~~~~~~g~~~~---~~ 218 (322)
T 2p4h_X 151 RSVKPFGWNYAVSKTLAEKAVLEFGEQN-GIDVVTLILPFIVGRFVCPKL--------PDSIEKALVLVLGKKEQ---IG 218 (322)
T ss_dssp HHHCCTTHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEESCCCSSSC--------CHHHHHHTHHHHSCGGG---CC
T ss_pred cccCcccccHHHHHHHHHHHHHHHHHhc-CCcEEEEcCCceECCCCCCCC--------CchHHHHHHHHhCCCcc---Cc
Confidence 1223 69999999999999988765 999999999999999643211 11223333333332111 22
Q ss_pred CCcccccCcceEEeeeccccc
Q psy16545 213 ADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 213 ~g~~~~~~~~v~d~v~~~~~a 233 (600)
+ ..++++|++|+++.+..+
T Consensus 219 ~--~~~~~i~v~Dva~a~~~~ 237 (322)
T 2p4h_X 219 V--TRFHMVHVDDVARAHIYL 237 (322)
T ss_dssp E--EEEEEEEHHHHHHHHHHH
T ss_pred C--CCcCEEEHHHHHHHHHHH
Confidence 2 223799999988766544
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4e-18 Score=177.05 Aligned_cols=194 Identities=14% Similarity=0.075 Sum_probs=141.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCC-----ccEEecccc--------------cccccChHHhhhHHhhhhcccccccCC-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKP-----VPYIVEARR--------------EGDIVSMYANTDLAQKELGWSARCTHD-I 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~-----~~~~~~~~~--------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~-~ 67 (600)
.|||++|++|+++.+ .+...+ .++++++|. .+|++|.+++.+ +++..+ +
T Consensus 5 lVtGatG~iG~~l~~--~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~~~~~~ 73 (364)
T 2v6g_A 5 LIVGVTGIIGNSLAE--ILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQA---------KLSPLTDV 73 (364)
T ss_dssp EEETTTSHHHHHHHH--HTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHH---------HHTTCTTC
T ss_pred EEECCCcHHHHHHHH--HHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHH---------HHhcCCCC
Confidence 389999999999965 333333 455555443 479999988888 665333 9
Q ss_pred CEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEE-------EecCccccCCC--CCCCCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLV-------FSSSCTVYGEP--QFLPITEDHPTG 136 (600)
Q Consensus 68 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I-------~~SS~~vyg~~--~~~~~~E~~~~~ 136 (600)
|+||||||... .++...+++|+.++.+++++|++. +++++| |+||.++||.. ...+++|+++.
T Consensus 74 d~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~- 147 (364)
T 2v6g_A 74 THVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPR- 147 (364)
T ss_dssp CEEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCC-
T ss_pred CEEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccC-
Confidence 99999999763 467789999999999999999998 789998 79999999874 34678999887
Q ss_pred CC-CChHHHHHHHHHHHHHHHHhhcCC-ceEEEEecccccCCCCCCCCCCCCCCcccchhHH-HHHhhc-CCCCeEEEec
Q psy16545 137 NI-KNVYGKTKHFIEEMLKDLSKAHKE-WNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPY-LAQVAI-GSKPHFTVFG 212 (600)
Q Consensus 137 ~p-~s~Y~~sK~~~e~~~~~~~~~~~~-~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~v~g 212 (600)
.| .+.| ..+|++++.+++++ + ++++++||++||||+.... ...+.+. +.+.+. ..+.++.+.|
T Consensus 148 ~~~~~~y----~~~E~~~~~~~~~~-~~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~~~g 214 (364)
T 2v6g_A 148 LKYMNFY----YDLEDIMLEEVEKK-EGLTWSVHRPGNIFGFSPYSM--------MNLVGTLCVYAAICKHEGKVLRFTG 214 (364)
T ss_dssp CSSCCHH----HHHHHHHHHHHTTS-TTCEEEEEEESSEECCCTTCS--------SCHHHHHHHHHHHHHHHTCCBCCCS
T ss_pred Cccchhh----HHHHHHHHHHhhcC-CCceEEEECCCceeCCCCCcc--------cchHHHHHHHHHHHHhcCCceecCC
Confidence 44 6788 35788898887765 6 9999999999999975311 1334443 333331 1234667789
Q ss_pred CCcccccCcceEE---eeeccc
Q psy16545 213 ADYETEDGTGKVV---AIDNFV 231 (600)
Q Consensus 213 ~g~~~~~~~~v~d---~v~~~~ 231 (600)
+|.+.++++++.| +++.+.
T Consensus 215 ~~~~~~~~~~~~~v~Dva~a~~ 236 (364)
T 2v6g_A 215 CKAAWDGYSDCSDADLIAEHHI 236 (364)
T ss_dssp CHHHHHSCBCCEEHHHHHHHHH
T ss_pred CcccccccCCCCcHHHHHHHHH
Confidence 9877777777755 555443
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.6e-18 Score=172.43 Aligned_cols=216 Identities=14% Similarity=0.101 Sum_probs=151.2
Q ss_pred CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHcCC--CEEEEecCcccccCCCCCCCCCCCCCCCCC
Q psy16545 275 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHGV--YQLVFSSSCTVYGEPQFLPITEDHPTGNIK 348 (600)
Q Consensus 275 ~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~~~--~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~ 348 (600)
++|+|||+|+...... +.......+..|+.+|.+|+++++..+. ++||++||.++||.....+.+|++|..+.
T Consensus 51 ~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~- 129 (298)
T 4b4o_A 51 SCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDF- 129 (298)
T ss_dssp SCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCS-
T ss_pred CCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCcccc-
Confidence 7899999998542221 2233456788999999999999998864 46999999999999888899999988765
Q ss_pred cccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHH
Q psy16545 349 NFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLL 427 (600)
Q Consensus 349 ~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~ 427 (600)
+.|+..| ...|.. .+....+++++++|++. +|++++. +..++
T Consensus 130 ~~~~~~~---~~~e~~--~~~~~~~~~~~~~r~~~v~g~~~~~-~~~~~------------------------------- 172 (298)
T 4b4o_A 130 DFFSNLV---TKWEAA--ARLPGDSTRQVVVRSGVVLGRGGGA-MGHML------------------------------- 172 (298)
T ss_dssp SHHHHHH---HHHHHH--HCCSSSSSEEEEEEECEEECTTSHH-HHHHH-------------------------------
T ss_pred chhHHHH---HHHHHH--HHhhccCCceeeeeeeeEEcCCCCc-hhHHH-------------------------------
Confidence 6777766 334432 23345688999999887 5554321 11111
Q ss_pred HHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhhhcCCCccccccCCCC
Q psy16545 428 RTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGT 507 (600)
Q Consensus 428 ~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~ 507 (600)
... ..+....+ |++.+. ++|+|
T Consensus 173 ------------------------------~~~--~~~~~~~~-------g~g~~~----~~~ih--------------- 194 (298)
T 4b4o_A 173 ------------------------------LPF--RLGLGGPI-------GSGHQF----FPWIH--------------- 194 (298)
T ss_dssp ------------------------------HHH--HTTCCCCB-------TTSCSB----CCEEE---------------
T ss_pred ------------------------------HHH--hcCCccee-------cccCce----eecCc---------------
Confidence 101 11333222 444544 88999
Q ss_pred CcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCC-----CC-C-----ccccccC
Q psy16545 508 GQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----EG-D-----IVSMYAN 576 (600)
Q Consensus 508 ~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~-----~~-~-----~~~~~~d 576 (600)
|+|+++++..+++++...++||+++++++|.+|+++.+++.+|++..+ ..|.. .+ . ......+
T Consensus 195 -----v~Dva~a~~~~~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~-pvP~~~~~~~~g~~~~~~~l~~~rv~ 268 (298)
T 4b4o_A 195 -----IGDLAGILTHALEANHVHGVLNGVAPSSATNAEFAQTFGAALGRRAFI-PLPSAVVQAVFGRQRAIMLLEGQKVI 268 (298)
T ss_dssp -----HHHHHHHHHHHHHCTTCCEEEEESCSCCCBHHHHHHHHHHHHTCCCCC-CBCHHHHHHHHCHHHHHHHHCCCCBC
T ss_pred -----HHHHHHHHHHHHhCCCCCCeEEEECCCccCHHHHHHHHHHHhCcCCcc-cCCHHHHHHHhcchhHHHhhCCCEEc
Confidence 999999999999877677899999999999999999999999975422 22211 01 0 0123456
Q ss_pred hHHHHHHcCceeeE-EEE
Q psy16545 577 TDLAQRELGWSARC-TVK 593 (600)
Q Consensus 577 ~~k~~~~lG~~p~~-~l~ 593 (600)
++|+++ +||++++ +|+
T Consensus 269 ~~kl~~-~Gf~f~yp~l~ 285 (298)
T 4b4o_A 269 PRRTLA-TGYQYSFPELG 285 (298)
T ss_dssp CHHHHH-TTCCCSCCSHH
T ss_pred HHHHHH-CCCCCCCCCHH
Confidence 789986 8999998 454
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.74 E-value=9.1e-19 Score=190.47 Aligned_cols=193 Identities=16% Similarity=0.096 Sum_probs=144.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccccc-------ccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE-------GDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVG 80 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~-------~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~ 80 (600)
.|||++|++|+.+.+ .+...+.++++++|.. +|+.+. +.+ ++. ++|+||||||.....
T Consensus 151 LVTGatG~IG~~l~~--~L~~~G~~V~~l~R~~~~~~~v~~d~~~~--~~~---------~l~--~~D~Vih~A~~~~~~ 215 (516)
T 3oh8_A 151 AITGSRGLVGRALTA--QLQTGGHEVIQLVRKEPKPGKRFWDPLNP--ASD---------LLD--GADVLVHLAGEPIFG 215 (516)
T ss_dssp EEESTTSHHHHHHHH--HHHHTTCEEEEEESSSCCTTCEECCTTSC--CTT---------TTT--TCSEEEECCCC----
T ss_pred EEECCCCHHHHHHHH--HHHHCCCEEEEEECCCCCccceeecccch--hHH---------hcC--CCCEEEECCCCcccc
Confidence 589999999999965 3333456777677763 455432 233 454 899999999986432
Q ss_pred -cCCCChhhhHHhHHHHHHHHHHH-HHHcCCCeEEEecCccccC-CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q psy16545 81 -ESMQEPLMYYKNNLIATINLLEV-MKSHGVYQLVFSSSCTVYG-EPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLS 157 (600)
Q Consensus 81 -~~~~~~~~~~~~Nv~gt~~ll~a-~~~~~~~r~I~~SS~~vyg-~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~ 157 (600)
.....+..++++|+.++.+|+++ +++.++++||++||.++|| .....+++|+++. +.+.|+.+|...|.+++.+.
T Consensus 216 ~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~--~~~~y~~~~~~~E~~~~~~~ 293 (516)
T 3oh8_A 216 RFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES--GDDFLAEVCRDWEHATAPAS 293 (516)
T ss_dssp -CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC--CSSHHHHHHHHHHHTTHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC--CcChHHHHHHHHHHHHHHHH
Confidence 23355677899999999999999 5667889999999999999 4455678898886 77899999999998876544
Q ss_pred hhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeecccccc
Q psy16545 158 KAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 158 ~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a~ 234 (600)
. . +++++++||++||||. ..+++.+...+. .+.. .++|+|.+.++++|++|+++.+..++
T Consensus 294 ~-~-gi~~~ilRp~~v~Gp~-------------~~~~~~~~~~~~-~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l 353 (516)
T 3oh8_A 294 D-A-GKRVAFIRTGVALSGR-------------GGMLPLLKTLFS-TGLG-GKFGDGTSWFSWIAIDDLTDIYYRAI 353 (516)
T ss_dssp H-T-TCEEEEEEECEEEBTT-------------BSHHHHHHHTTC----C-CCCTTSCCEECEEEHHHHHHHHHHHH
T ss_pred h-C-CCCEEEEEeeEEECCC-------------CChHHHHHHHHH-hCCC-cccCCCCceEceEeHHHHHHHHHHHH
Confidence 3 3 8999999999999995 236676666554 2222 35799999999999999998776554
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.3e-18 Score=172.78 Aligned_cols=193 Identities=10% Similarity=-0.028 Sum_probs=139.8
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccccc--ccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCccc----C
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARRE--GDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGE----S 82 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~--~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~----~ 82 (600)
|||++|++|+++.+ .|...+.+++++.|+. .++...+...+ .++ ++|+|||+|+...... .
T Consensus 5 VTGatGfIG~~L~~--~L~~~G~~V~~l~R~~~~~~~~~~~~~~~---------~l~--~~d~vihla~~~i~~~~~~~~ 71 (298)
T 4b4o_A 5 VGGGTGFIGTALTQ--LLNARGHEVTLVSRKPGPGRITWDELAAS---------GLP--SCDAAVNLAGENILNPLRRWN 71 (298)
T ss_dssp EETTTSHHHHHHHH--HHHHTTCEEEEEESSCCTTEEEHHHHHHH---------CCC--SCSEEEECCCCCSSCTTSCCC
T ss_pred EECCCCHHHHHHHH--HHHHCCCEEEEEECCCCcCeeecchhhHh---------hcc--CCCEEEEeccCcccchhhhhh
Confidence 89999999999965 4444556666666653 23322222222 455 8999999998642211 1
Q ss_pred CCChhhhHHhHHHHHHHHHHHHHHcCC--CeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc
Q psy16545 83 MQEPLMYYKNNLIATINLLEVMKSHGV--YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH 160 (600)
Q Consensus 83 ~~~~~~~~~~Nv~gt~~ll~a~~~~~~--~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~ 160 (600)
......++++|+.+|.+|++++++.+. +++|++||.++||.....+++|++|. .+.+.|+.+|...|... ....
T Consensus 72 ~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~-~~~~~~~~~~~~~e~~~--~~~~- 147 (298)
T 4b4o_A 72 ETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPG-GDFDFFSNLVTKWEAAA--RLPG- 147 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCC-SCSSHHHHHHHHHHHHH--CCSS-
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCc-cccchhHHHHHHHHHHH--Hhhc-
Confidence 233456889999999999999998764 45899999999998888899999999 88899999888777643 2233
Q ss_pred CCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 161 KEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 161 ~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
.+++++++||+.||||. +..++.+..... .+.. ..+|+|.+.++|+|++|+++.+..+
T Consensus 148 ~~~~~~~~r~~~v~g~~-------------~~~~~~~~~~~~-~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~ 205 (298)
T 4b4o_A 148 DSTRQVVVRSGVVLGRG-------------GGAMGHMLLPFR-LGLG-GPIGSGHQFFPWIHIGDLAGILTHA 205 (298)
T ss_dssp SSSEEEEEEECEEECTT-------------SHHHHHHHHHHH-TTCC-CCBTTSCSBCCEEEHHHHHHHHHHH
T ss_pred cCCceeeeeeeeEEcCC-------------CCchhHHHHHHh-cCCc-ceecccCceeecCcHHHHHHHHHHH
Confidence 38999999999999995 224444444433 2222 3469999999999999998866644
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-19 Score=184.93 Aligned_cols=199 Identities=14% Similarity=0.110 Sum_probs=128.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
.|||++|++|+++.+... ..+.+++++.|+ .+|++|.+++.+ +++
T Consensus 13 lVTGatGfIG~~l~~~Ll--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~-- 79 (338)
T 2rh8_A 13 CVVGGTGFVASLLVKLLL--QKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEA---------PIA-- 79 (338)
T ss_dssp EEECTTSHHHHHHHHHHH--HTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHH---------HHT--
T ss_pred EEECCchHHHHHHHHHHH--HCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHH---------HHc--
Confidence 489999999999965322 122222211111 578887777777 665
Q ss_pred CCCEEEEcCcccCcccCCCCh-hhhHHhHHHHHHHHHHHHHHcC-CCeEEEecCcc-ccCCCC---CCCCCCCCCCC---
Q psy16545 66 DIDCVIHFAAVKAVGESMQEP-LMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCT-VYGEPQ---FLPITEDHPTG--- 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~~~~~-~~~~~~Nv~gt~~ll~a~~~~~-~~r~I~~SS~~-vyg~~~---~~~~~E~~~~~--- 136 (600)
++|+|||+||.... ...++ ...+++|+.|+.+++++|++.+ ++|||++||.+ +|+... ..+++|+++..
T Consensus 80 ~~D~Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~ 157 (338)
T 2rh8_A 80 GCDFVFHVATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEF 157 (338)
T ss_dssp TCSEEEEESSCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC--
T ss_pred CCCEEEEeCCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhh
Confidence 79999999997532 22333 3489999999999999999985 89999999987 443211 13678876320
Q ss_pred ----CC-CChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEe
Q psy16545 137 ----NI-KNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVF 211 (600)
Q Consensus 137 ----~p-~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 211 (600)
.| .++|+.||.++|++++.+.+++ +++++++||++||||...... ...+..+...+.|. +. .+
T Consensus 158 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~~lrp~~v~Gp~~~~~~--------~~~~~~~~~~~~g~--~~-~~ 225 (338)
T 2rh8_A 158 LTSAKPPTWGYPASKTLAEKAAWKFAEEN-NIDLITVIPTLMAGSSLTSDV--------PSSIGLAMSLITGN--EF-LI 225 (338)
T ss_dssp -----CCCCCCTTSCCHHHHHHHHHHHHH-TCCEEEEEECEEESCCSSSSC--------CHHHHHHHHHHHTC--HH-HH
T ss_pred ccccCCccchHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCceECCCCCCCC--------CchHHHHHHHHcCC--cc-cc
Confidence 11 2269999999999999988766 899999999999999643211 22233333333332 21 13
Q ss_pred cCCcc------cccCcceEEeeeccccc
Q psy16545 212 GADYE------TEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 212 g~g~~------~~~~~~v~d~v~~~~~a 233 (600)
+++.+ .++++|++|+++.+..+
T Consensus 226 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 253 (338)
T 2rh8_A 226 NGMKGMQMLSGSVSIAHVEDVCRAHIFV 253 (338)
T ss_dssp HHHHHHHHHHSSEEEEEHHHHHHHHHHH
T ss_pred ccccccccccCcccEEEHHHHHHHHHHH
Confidence 32222 23789999988766544
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-17 Score=170.36 Aligned_cols=221 Identities=15% Similarity=0.160 Sum_probs=161.3
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
..+++++.+|+.|.+.+.++++ ++|+|||+|+....+.+..++...+++|+.++.+++++|++.+++|||++||..+|
T Consensus 69 ~~~v~~~~~Dl~d~~~l~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~ 146 (344)
T 2gn4_A 69 DPRMRFFIGDVRDLERLNYALE--GVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA 146 (344)
T ss_dssp CTTEEEEECCTTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS
T ss_pred CCCEEEEECCCCCHHHHHHHHh--cCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC
Confidence 4578999999999999999998 89999999998765555567889999999999999999999999999999997655
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCC
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNK 406 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~ 406 (600)
. | .++|+.|| ..+|.+++.+... .+++++++||++ +|+++. .+
T Consensus 147 ~--------------p-~~~Y~~sK---~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~-~i-------------- 193 (344)
T 2gn4_A 147 N--------------P-INLYGATK---LCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS-VV-------------- 193 (344)
T ss_dssp S--------------C-CSHHHHHH---HHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS-HH--------------
T ss_pred C--------------C-ccHHHHHH---HHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC-HH--------------
Confidence 2 2 37899999 7899999988754 579999999987 444321 11
Q ss_pred CcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCC-CCceeeccCCCCCcccchh
Q psy16545 407 PVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGK-PVPYIFYNLGTGQGTSVLQ 485 (600)
Q Consensus 407 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~ 485 (600)
..+...+. .|+ ++++ .++...
T Consensus 194 -----------------------------------------------~~~~~~~~--~g~~~~~i-----~~~~~~---- 215 (344)
T 2gn4_A 194 -----------------------------------------------PFFKKLVQ--NKASEIPI-----TDIRMT---- 215 (344)
T ss_dssp -----------------------------------------------HHHHHHHH--HTCCCEEE-----SCTTCE----
T ss_pred -----------------------------------------------HHHHHHHH--cCCCceEE-----eCCCeE----
Confidence 11111111 244 5554 123333
Q ss_pred hhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCC
Q psy16545 486 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEAR 565 (600)
Q Consensus 486 ~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 565 (600)
|+|+| ++|+++++..++.....+++||++++ .+|+.|+++.+.+.++.+ ....
T Consensus 216 --r~~i~--------------------v~D~a~~v~~~l~~~~~g~~~~~~~~-~~s~~el~~~i~~~~~~~----~~~~ 268 (344)
T 2gn4_A 216 --RFWIT--------------------LDEGVSFVLKSLKRMHGGEIFVPKIP-SMKMTDLAKALAPNTPTK----IIGI 268 (344)
T ss_dssp --EEEEC--------------------HHHHHHHHHHHHHHCCSSCEEEECCC-EEEHHHHHHHHCTTCCEE----ECCC
T ss_pred --EeeEE--------------------HHHHHHHHHHHHhhccCCCEEecCCC-cEEHHHHHHHHHHhCCee----EcCC
Confidence 77888 88899999888876556789999866 699999999999866432 2222
Q ss_pred CCCC-ccccccChHHHHHHcCceeeEE
Q psy16545 566 REGD-IVSMYANTDLAQRELGWSARCT 591 (600)
Q Consensus 566 ~~~~-~~~~~~d~~k~~~~lG~~p~~~ 591 (600)
++++ ......+.++.++.++|.+.+.
T Consensus 269 ~~~e~~~e~~~~~~~~~~~~~~~~~~~ 295 (344)
T 2gn4_A 269 RPGEKLHEVMIPKDESHLALEFEDFFI 295 (344)
T ss_dssp CTTCCSSCEEECGGGGGGEEECSSEEE
T ss_pred CCCccHhhhccCHhHHHhhccCCCEEE
Confidence 2232 2233445666666677765554
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.72 E-value=4e-17 Score=161.99 Aligned_cols=122 Identities=20% Similarity=0.257 Sum_probs=107.3
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 332 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~ 332 (600)
+++++.+|+.+.+.+.++++ ++|+|||+|+.. ...+....++.|+.++.+++++|++.+++||||+||.++|+.
T Consensus 43 ~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~ 116 (267)
T 3ay3_A 43 HEEIVACDLADAQAVHDLVK--DCDGIIHLGGVS----VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGY 116 (267)
T ss_dssp TEEECCCCTTCHHHHHHHHT--TCSEEEECCSCC----SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTT
T ss_pred CccEEEccCCCHHHHHHHHc--CCCEEEECCcCC----CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCC
Confidence 56889999999999999998 799999999875 234567889999999999999999999999999999999986
Q ss_pred C-CCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeeccc
Q psy16545 333 P-QFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL 384 (600)
Q Consensus 333 ~-~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~ 384 (600)
. ...+++|++|..|. +.|+.+| ...|.+++.+...++++++++||+.+
T Consensus 117 ~~~~~~~~E~~~~~~~-~~Y~~sK---~~~e~~~~~~~~~~gi~~~~lrp~~v 165 (267)
T 3ay3_A 117 YPRTTRIDTEVPRRPD-SLYGLSK---CFGEDLASLYYHKFDIETLNIRIGSC 165 (267)
T ss_dssp SBTTSCBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHTTCCCEEEEEECBC
T ss_pred CCCCCCCCCCCCCCCC-ChHHHHH---HHHHHHHHHHHHHcCCCEEEEeceee
Confidence 4 35689999988775 8999999 77899999988888999999998874
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-17 Score=167.72 Aligned_cols=171 Identities=11% Similarity=0.057 Sum_probs=127.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccccc---------------ccccChHHhhhHHhhhhcccccccCCCCEEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE---------------GDIVSMYANTDLAQKELGWSARCTHDIDCVIH 72 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~---------------~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih 72 (600)
.|||+ |++|+++.+. +...+.++++++|+. +|+.|.+ + .++|+|||
T Consensus 9 lVtGa-G~iG~~l~~~--L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--------------~--~~~d~vi~ 69 (286)
T 3ius_A 9 LSFGH-GYTARVLSRA--LAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--------------L--DGVTHLLI 69 (286)
T ss_dssp EEETC-CHHHHHHHHH--HGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--------------C--TTCCEEEE
T ss_pred EEECC-cHHHHHHHHH--HHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--------------c--CCCCEEEE
Confidence 58998 9999999653 333345566555543 2333211 2 37999999
Q ss_pred cCcccCcccCCCChhhhHHhHHHHHHHHHHHHHH--cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q psy16545 73 FAAVKAVGESMQEPLMYYKNNLIATINLLEVMKS--HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIE 150 (600)
Q Consensus 73 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~--~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e 150 (600)
+|+..... + ..+.+++++|++ .++++||++||.++||.....+++|+++. .|.++|+.+|+++|
T Consensus 70 ~a~~~~~~----~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~-~p~~~Y~~sK~~~E 135 (286)
T 3ius_A 70 STAPDSGG----D---------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPL-TPTAARGRWRVMAE 135 (286)
T ss_dssp CCCCBTTB----C---------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCC-CCCSHHHHHHHHHH
T ss_pred CCCccccc----c---------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCC-CCCCHHHHHHHHHH
Confidence 99976421 1 125789999998 68899999999999998877789999999 89999999999999
Q ss_pred HHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeecc
Q psy16545 151 EMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNF 230 (600)
Q Consensus 151 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~ 230 (600)
++++.+ . +++++++||+++|||.... +.+.. .++.+.+.++ .+.++++|++|+++.+
T Consensus 136 ~~~~~~---~-~~~~~ilRp~~v~G~~~~~----------------~~~~~--~~~~~~~~~~-~~~~~~i~v~Dva~a~ 192 (286)
T 3ius_A 136 QQWQAV---P-NLPLHVFRLAGIYGPGRGP----------------FSKLG--KGGIRRIIKP-GQVFSRIHVEDIAQVL 192 (286)
T ss_dssp HHHHHS---T-TCCEEEEEECEEEBTTBSS----------------STTSS--SSCCCEEECT-TCCBCEEEHHHHHHHH
T ss_pred HHHHhh---c-CCCEEEEeccceECCCchH----------------HHHHh--cCCccccCCC-CcccceEEHHHHHHHH
Confidence 999887 2 8999999999999996321 11122 3345565555 5889999999998876
Q ss_pred cccc
Q psy16545 231 VNSV 234 (600)
Q Consensus 231 ~~a~ 234 (600)
..++
T Consensus 193 ~~~~ 196 (286)
T 3ius_A 193 AASM 196 (286)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.71 E-value=2.7e-17 Score=164.87 Aligned_cols=209 Identities=15% Similarity=0.076 Sum_probs=152.5
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.|++.+.++++ ++|+|||+|+.. . .. +.|+.++.+++++|++.+++||||+||.++|+
T Consensus 45 ~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~~-~-----~~----~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~ 112 (287)
T 2jl1_A 45 QGVEVRHGDYNQPESLQKAFA--GVSKLLFISGPH-Y-----DN----TLLIVQHANVVKAARDAGVKHIAYTGYAFAEE 112 (287)
T ss_dssp TTCEEEECCTTCHHHHHHHTT--TCSEEEECCCCC-S-----CH----HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG
T ss_pred cCCeEEEeccCCHHHHHHHHh--cCCEEEEcCCCC-c-----Cc----hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC
Confidence 468899999999999999998 799999999852 1 11 57999999999999999999999999998873
Q ss_pred CCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCC-cchHHHHHHHHHHHhCCCCcce
Q psy16545 332 EPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQ-GTSVLQLLRTFERVTGNKPVPY 410 (600)
Q Consensus 332 ~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~-~~~~~~~~~~~~~~~g~~~~~~ 410 (600)
. + .+|+.+| ..+|.+++ ..+++++++||+.+++.. ...
T Consensus 113 ~-------------~--~~y~~~K---~~~E~~~~----~~~~~~~ilrp~~~~~~~~~~~------------------- 151 (287)
T 2jl1_A 113 S-------------I--IPLAHVH---LATEYAIR----TTNIPYTFLRNALYTDFFVNEG------------------- 151 (287)
T ss_dssp C-------------C--STHHHHH---HHHHHHHH----HTTCCEEEEEECCBHHHHSSGG-------------------
T ss_pred C-------------C--CchHHHH---HHHHHHHH----HcCCCeEEEECCEeccccchhh-------------------
Confidence 1 1 4799999 77888875 369999999987652200 000
Q ss_pred EEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhh
Q psy16545 411 IFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF 490 (600)
Q Consensus 411 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f 490 (600)
+..+ +. .+. ... ..+++. ++|
T Consensus 152 ------------------------------------------~~~~---~~--~~~-~~~-----~~~~~~------~~~ 172 (287)
T 2jl1_A 152 ------------------------------------------LRAS---TE--SGA-IVT-----NAGSGI------VNS 172 (287)
T ss_dssp ------------------------------------------GHHH---HH--HTE-EEE-----SCTTCC------BCC
T ss_pred ------------------------------------------HHHH---hh--CCc-eec-----cCCCCc------cCc
Confidence 0000 00 011 111 123333 677
Q ss_pred hhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC-CceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCCC--
Q psy16545 491 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP-VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE-- 567 (600)
Q Consensus 491 i~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~-~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~-- 567 (600)
+| ++|+++++..++..+ ..+++||+++++.+|+.|+++.+.+.+|.+.++...+...
T Consensus 173 i~--------------------~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~ 232 (287)
T 2jl1_A 173 VT--------------------RNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEEK 232 (287)
T ss_dssp BC--------------------HHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHH
T ss_pred cC--------------------HHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCCcceEEeCCHHHHH
Confidence 77 899999999888764 3578999999999999999999999999876655444210
Q ss_pred ------CCc----------------cccccChHHHHHHcCceeeEEEEe
Q psy16545 568 ------GDI----------------VSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 568 ------~~~----------------~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+.+ .....|++|++++|| |.++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG--~~~~l~e 279 (287)
T 2jl1_A 233 NFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG--SLTPLKE 279 (287)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS--SCCCHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC--CCCCHHH
Confidence 111 134568899999999 7778764
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.70 E-value=6.4e-17 Score=171.89 Aligned_cols=207 Identities=13% Similarity=0.104 Sum_probs=143.7
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
+.++.++.+|+.+++.+. .+. ++|+|||+|+.... ..++...++.|+.++.+++++|++ ++++|||+||.++
T Consensus 129 ~~~v~~v~~Dl~d~~~l~-~~~--~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~- 200 (427)
T 4f6c_A 129 LSNIEVIVGDFECMDDVV-LPE--NMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV- 200 (427)
T ss_dssp HTTEEEEEECC---CCCC-CSS--CCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-
T ss_pred cCceEEEeCCCCCcccCC-CcC--CCCEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-
Confidence 468999999999987777 333 89999999997642 346677899999999999999999 7899999999999
Q ss_pred cC-----CCCCCCCCCCCCCC--CCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHH
Q psy16545 331 GE-----PQFLPITEDHPTGN--IKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERV 402 (600)
Q Consensus 331 g~-----~~~~~~~E~~~~~~--~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~ 402 (600)
|. ....+++|+++..+ +.+.|+.+| ..+|.+++.+.+ .+++++++||++ +|++....+
T Consensus 201 G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK---~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~---------- 266 (427)
T 4f6c_A 201 GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSK---FYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWH---------- 266 (427)
T ss_dssp GSEECSSCSCCEECTTCSCSSCCCCSHHHHHH---HHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCC----------
T ss_pred CCCccCCCCCccccccccccCCCCCCchHHHH---HHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCcc----------
Confidence 54 23567888887321 348999999 789999999864 699999999988 555433210
Q ss_pred hCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCccc
Q psy16545 403 TGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTS 482 (600)
Q Consensus 403 ~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 482 (600)
.+.. ....+..++..+.. +.+++. +.+++.
T Consensus 267 -------------~~~~-----------------------------~~~~~~~~~~~~~~--~~~~~~-----~~~~~~- 296 (427)
T 4f6c_A 267 -------------MRNI-----------------------------KTNRFSMVMNDLLQ--LDCIGV-----SMAEMP- 296 (427)
T ss_dssp -------------CTTG-----------------------------GGCHHHHHHHHHHH--SSEEEH-----HHHTCE-
T ss_pred -------------ccCc-----------------------------chHHHHHHHHHHHh--cCCCCC-----ccccce-
Confidence 0000 00001112221111 222221 112222
Q ss_pred chhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcC
Q psy16545 483 VLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTG 555 (600)
Q Consensus 483 ~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g 555 (600)
++|++ ++|+++++..++..+..+++||+++++++|+.|+++.+++ +|
T Consensus 297 -----~~~v~--------------------v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g 343 (427)
T 4f6c_A 297 -----VDFSF--------------------VDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE 343 (427)
T ss_dssp -----ECCEE--------------------HHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred -----EEEee--------------------HHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence 77877 9999999999987765789999999999999999999998 55
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.68 E-value=4e-17 Score=156.96 Aligned_cols=168 Identities=14% Similarity=0.087 Sum_probs=130.6
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc-------------cccccC-hHHhhhHHhhhhcccccccCCCCEEEEcC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------EGDIVS-MYANTDLAQKELGWSARCTHDIDCVIHFA 74 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------~~Dl~~-~~~~~~~~~~~~~~~~~~~~~~d~Vih~A 74 (600)
|||++|++|+.+.+ .+...+.++++++|+ .+|++| .+++.+ +++ ++|+|||||
T Consensus 5 ItGatG~iG~~l~~--~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~---------~~~--~~d~vi~~a 71 (219)
T 3dqp_A 5 IVGSTGRVGKSLLK--SLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAK---------QLH--GMDAIINVS 71 (219)
T ss_dssp EESTTSHHHHHHHH--HHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHT---------TTT--TCSEEEECC
T ss_pred EECCCCHHHHHHHH--HHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHH---------HHc--CCCEEEECC
Confidence 79999999999965 444444555555555 579999 888888 776 899999999
Q ss_pred cccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q psy16545 75 AVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLK 154 (600)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~ 154 (600)
|... ...+++|+.++.+++++|++.++++||++||.++++. .+..| .+. .|.++|+.+|.++|++++
T Consensus 72 g~~~--------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~---~~~~e-~~~-~~~~~Y~~sK~~~e~~~~ 138 (219)
T 3dqp_A 72 GSGG--------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQP---EKWIG-AGF-DALKDYYIAKHFADLYLT 138 (219)
T ss_dssp CCTT--------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCG---GGCCS-HHH-HHTHHHHHHHHHHHHHHH
T ss_pred cCCC--------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCC---Ccccc-ccc-ccccHHHHHHHHHHHHHH
Confidence 9864 1278899999999999999999999999999877653 24455 455 678999999999999986
Q ss_pred HHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeecccccc
Q psy16545 155 DLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 155 ~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a~ 234 (600)
+. .+++++++||+.+||+...+. +. . +.+.+++++++|+++.+..++
T Consensus 139 ---~~-~~i~~~ilrp~~v~g~~~~~~--------------------------~~-~--~~~~~~~i~~~Dva~~i~~~l 185 (219)
T 3dqp_A 139 ---KE-TNLDYTIIQPGALTEEEATGL--------------------------ID-I--NDEVSASNTIGDVADTIKELV 185 (219)
T ss_dssp ---HS-CCCEEEEEEECSEECSCCCSE--------------------------EE-E--SSSCCCCEEHHHHHHHHHHHH
T ss_pred ---hc-cCCcEEEEeCceEecCCCCCc--------------------------cc-c--CCCcCCcccHHHHHHHHHHHH
Confidence 23 399999999999999853211 11 1 246678999999988777664
Q ss_pred c
Q psy16545 235 H 235 (600)
Q Consensus 235 ~ 235 (600)
.
T Consensus 186 ~ 186 (219)
T 3dqp_A 186 M 186 (219)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.2e-16 Score=173.49 Aligned_cols=208 Identities=13% Similarity=0.095 Sum_probs=145.2
Q ss_pred hCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccc
Q psy16545 250 TGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 329 (600)
Q Consensus 250 ~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~v 329 (600)
...+++++.+|+.++..+. .+. ++|+|||+|+.... ..++...++.|+.++.+++++|++ +.++|||+||.++
T Consensus 209 ~~~~v~~v~~Dl~d~~~l~-~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v 281 (508)
T 4f6l_B 209 MLSNIEVIVGDFECMDDVV-LPE--NMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV 281 (508)
T ss_dssp HSTTEEEEEEBTTBCSSCC-CSS--CCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT
T ss_pred ccCceEEEecCCcccccCC-Ccc--CCCEEEECCceecC---CCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh
Confidence 4578999999999977776 333 89999999997542 345667889999999999999998 6799999999999
Q ss_pred ccC-----CCCCCCCCCCCCCC--CCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHH
Q psy16545 330 YGE-----PQFLPITEDHPTGN--IKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFER 401 (600)
Q Consensus 330 Yg~-----~~~~~~~E~~~~~~--~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~ 401 (600)
|. ....+++|+++..+ +.+.|+.+| ..+|.+++.+.+ .|++++++||++ +|++.+..+
T Consensus 282 -G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK---~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~--------- 347 (508)
T 4f6l_B 282 -GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSK---FYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWH--------- 347 (508)
T ss_dssp -TSEECTTCSCCEECTTCSCSSBCCCSHHHHHH---HHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCC---------
T ss_pred -ccCCccCCcCcccccccccccccCCCcHHHHH---HHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcc---------
Confidence 43 23457888887322 348999999 789999999865 699999999988 655433210
Q ss_pred HhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcc
Q psy16545 402 VTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGT 481 (600)
Q Consensus 402 ~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 481 (600)
.... ....+..++..+. ....++. +.+.
T Consensus 348 --------------~~~~-----------------------------~~~~~~~~i~~~~--~~~~~~~-------~~g~ 375 (508)
T 4f6l_B 348 --------------MRNI-----------------------------KTNRFSMVMNDLL--QLDCIGV-------SMAE 375 (508)
T ss_dssp --------------CTTC-----------------------------TTCHHHHHHHHHT--TCSEEET-------TGGG
T ss_pred --------------cCCc-----------------------------chHHHHHHHHHHH--HcCCCCC-------CccC
Confidence 0000 0000111111110 1112221 2222
Q ss_pred cchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhc
Q psy16545 482 SVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVT 554 (600)
Q Consensus 482 ~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~ 554 (600)
+. ++|+| ++|+++++..++..+..+++||+++++.+|+.|+++.+++..
T Consensus 376 ~~----~~~v~--------------------v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 376 MP----VDFSF--------------------VDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE 424 (508)
T ss_dssp SE----EECEE--------------------HHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred ce----EEEEc--------------------HHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence 22 78887 999999999998766578999999999999999999999765
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=5e-17 Score=162.81 Aligned_cols=208 Identities=13% Similarity=0.100 Sum_probs=146.1
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.+++.+.++++ ++|+|||+|+... ..|+.++.+++++|++.+++||||+||..+|.
T Consensus 44 ~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~a~~~~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~ 109 (286)
T 2zcu_A 44 QGITVRQADYGDEAALTSALQ--GVEKLLLISSSEV------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT 109 (286)
T ss_dssp TTCEEEECCTTCHHHHHHHTT--TCSEEEECC--------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT
T ss_pred CCCeEEEcCCCCHHHHHHHHh--CCCEEEEeCCCCc------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC
Confidence 468899999999999999998 7899999998521 14788999999999999999999999998872
Q ss_pred CCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCCCCcceE
Q psy16545 332 EPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKPVPYI 411 (600)
Q Consensus 332 ~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 411 (600)
. ..+|+.+| ..+|.+++. .+++++++||+.+++.... .
T Consensus 110 --------------~-~~~y~~sK---~~~e~~~~~----~~~~~~ilrp~~~~~~~~~-------~------------- 147 (286)
T 2zcu_A 110 --------------S-PLGLADEH---IETEKMLAD----SGIVYTLLRNGWYSENYLA-------S------------- 147 (286)
T ss_dssp --------------C-CSTTHHHH---HHHHHHHHH----HCSEEEEEEECCBHHHHHT-------T-------------
T ss_pred --------------C-cchhHHHH---HHHHHHHHH----cCCCeEEEeChHHhhhhHH-------H-------------
Confidence 1 14799999 778888764 6899999998655321000 0
Q ss_pred EeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhh
Q psy16545 412 FYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFE 491 (600)
Q Consensus 412 ~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi 491 (600)
+..+ +. +.++.+ +.+++. ++|+
T Consensus 148 -----------------------------------------~~~~---~~---~~~~~~-----~~~~~~------~~~i 169 (286)
T 2zcu_A 148 -----------------------------------------APAA---LE---HGVFIG-----AAGDGK------IASA 169 (286)
T ss_dssp -----------------------------------------HHHH---HH---HTEEEE-----SCTTCC------BCCB
T ss_pred -----------------------------------------hHHh---hc---CCceec-----cCCCCc------cccc
Confidence 0000 00 111111 123332 6777
Q ss_pred hhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC-CceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCCC---
Q psy16545 492 RVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP-VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE--- 567 (600)
Q Consensus 492 ~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~-~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~--- 567 (600)
| ++|+++++..++..+ ..+++||+++++.+|+.|+++.+.+.+|.+.++...+...
T Consensus 170 ~--------------------~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~ 229 (286)
T 2zcu_A 170 T--------------------RADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAA 229 (286)
T ss_dssp C--------------------HHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHH
T ss_pred c--------------------HHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCCCceeeCCHHHHHH
Confidence 7 889999998888654 3578999999999999999999999999876655444210
Q ss_pred -----CCc----------------cccccChHHHHHHcCceeeEEEEe
Q psy16545 568 -----GDI----------------VSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 568 -----~~~----------------~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+.+ .....|++|+++.||| |.++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~-~~~~~~e 276 (286)
T 2zcu_A 230 ALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGH-PTTTLAE 276 (286)
T ss_dssp HHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTS-CCCCHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCc-CCCCHHH
Confidence 111 1245688999999997 5667654
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=6.7e-17 Score=154.68 Aligned_cols=172 Identities=13% Similarity=0.105 Sum_probs=125.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCc--cEEecccc-----------cccccChHHhhhHHhhhhcccccccCCCCEEEEcC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPV--PYIVEARR-----------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFA 74 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~--~~~~~~~~-----------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A 74 (600)
.|||++|++|+.+.+.. ...+. +++.++|+ .+|+.+.+++.+ ++ +|+|||||
T Consensus 9 lVtGatG~iG~~l~~~l--~~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~---------~~----~d~vi~~a 73 (215)
T 2a35_A 9 LLAGATGLTGEHLLDRI--LSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLD---------GS----IDTAFCCL 73 (215)
T ss_dssp EEECTTSHHHHHHHHHH--HHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCC---------SC----CSEEEECC
T ss_pred EEECCCcHHHHHHHHHH--HhCCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHH---------hh----hcEEEECe
Confidence 58999999999996533 22333 55555554 457776666655 44 89999999
Q ss_pred cccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q psy16545 75 AVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLK 154 (600)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~ 154 (600)
|.... ...++...+++|+.++.+++++|++.+++++|++||..+|+ .+.++|+.+|.++|++++
T Consensus 74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~--------------~~~~~y~~sK~~~e~~~~ 137 (215)
T 2a35_A 74 GTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA--------------KSSIFYNRVKGELEQALQ 137 (215)
T ss_dssp CCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--------------TCSSHHHHHHHHHHHHHT
T ss_pred eeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCC--------------CCccHHHHHHHHHHHHHH
Confidence 97642 23567789999999999999999999999999999998875 345799999999999886
Q ss_pred HHHhhcCCce-EEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 155 DLSKAHKEWN-IISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 155 ~~~~~~~~~~-~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
. . +++ ++++||+.+|||... ..++..+. +. ..+ +++| .+++++++|+++.+..+
T Consensus 138 ~----~-~~~~~~~vrp~~v~g~~~~-----------~~~~~~~~----~~--~~~-~~~~--~~~~i~~~Dva~~~~~~ 192 (215)
T 2a35_A 138 E----Q-GWPQLTIARPSLLFGPREE-----------FRLAEILA----AP--IAR-ILPG--KYHGIEACDLARALWRL 192 (215)
T ss_dssp T----S-CCSEEEEEECCSEESTTSC-----------EEGGGGTT----CC--CC-----C--HHHHHHHHHHHHHHHHH
T ss_pred H----c-CCCeEEEEeCceeeCCCCc-----------chHHHHHH----Hh--hhh-ccCC--CcCcEeHHHHHHHHHHH
Confidence 5 2 888 999999999999632 11222221 11 122 2333 67899999998877766
Q ss_pred cc
Q psy16545 234 VH 235 (600)
Q Consensus 234 ~~ 235 (600)
+.
T Consensus 193 ~~ 194 (215)
T 2a35_A 193 AL 194 (215)
T ss_dssp HT
T ss_pred Hh
Confidence 44
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=2.5e-15 Score=148.98 Aligned_cols=124 Identities=23% Similarity=0.334 Sum_probs=109.3
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
+.+++++.+|+++.+++.++++ ++|+|||+|+.. ...+....+++|+.++.+++++|++.+++|||++||.++|
T Consensus 42 ~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~Ag~~----~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~ 115 (267)
T 3rft_A 42 GPNEECVQCDLADANAVNAMVA--GCDGIVHLGGIS----VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTI 115 (267)
T ss_dssp CTTEEEEECCTTCHHHHHHHHT--TCSEEEECCSCC----SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGG
T ss_pred CCCCEEEEcCCCCHHHHHHHHc--CCCEEEECCCCc----CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHh
Confidence 4568999999999999999998 899999999973 2346778999999999999999999999999999999999
Q ss_pred cC-CCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeeccc
Q psy16545 331 GE-PQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL 384 (600)
Q Consensus 331 g~-~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~ 384 (600)
|. ....+++|+.+..+. +.|+.|| ...|.+++.+...++++++++||+.+
T Consensus 116 g~~~~~~~~~e~~~~~~~-~~Y~~sK---~~~e~~~~~~a~~~g~~~~~vr~~~v 166 (267)
T 3rft_A 116 GYYPQTERLGPDVPARPD-GLYGVSK---CFGENLARMYFDKFGQETALVRIGSC 166 (267)
T ss_dssp TTSBTTSCBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECBC
T ss_pred CCCCCCCCCCCCCCCCCC-ChHHHHH---HHHHHHHHHHHHHhCCeEEEEEeecc
Confidence 84 345578899887765 8999999 78999999999999999999998774
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.1e-16 Score=151.77 Aligned_cols=179 Identities=9% Similarity=0.031 Sum_probs=109.2
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc--------------cccccChHHhhhHHhhhhcccccccCCCCEEEEcC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFA 74 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A 74 (600)
|||++|++|+.+.+... ..+.++++++|+ .+|++|.++ + .+. ++|+|||||
T Consensus 5 VtGatG~iG~~l~~~L~--~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~--~---------~~~--~~d~vi~~a 69 (221)
T 3ew7_A 5 IIGATGRAGSRILEEAK--NRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTL--S---------DLS--DQNVVVDAY 69 (221)
T ss_dssp EETTTSHHHHHHHHHHH--HTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH--H---------HHT--TCSEEEECC
T ss_pred EEcCCchhHHHHHHHHH--hCCCEEEEEEcCchhhhhccCCCeEEeccccChhh--h---------hhc--CCCEEEECC
Confidence 79999999999965332 223344444443 678887766 4 455 799999999
Q ss_pred cccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCcccc-CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q psy16545 75 AVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY-GEPQFLPITEDHPTGNIKNVYGKTKHFIEEML 153 (600)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vy-g~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~ 153 (600)
|.... ..+.|+.++.+++++|++.+++++|++||.+.+ +.....+..|+.+. .|.+.|+.+|...|.+
T Consensus 70 g~~~~---------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~-~~~~~y~~~k~~~e~~- 138 (221)
T 3ew7_A 70 GISPD---------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGL-REAPYYPTARAQAKQL- 138 (221)
T ss_dssp CSSTT---------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC--------------------CCCSCCHHHHHHHH-
T ss_pred cCCcc---------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCC-CCHHHHHHHHHHHHHH-
Confidence 98421 256799999999999999988999999998664 44343466777777 7889999999999986
Q ss_pred HHHHh-hcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeecccc
Q psy16545 154 KDLSK-AHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVN 232 (600)
Q Consensus 154 ~~~~~-~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~ 232 (600)
..+.. .. +++++++||+.+|||.+.. .. + .. ..+.+.+.+++. ++++++|+++.+..
T Consensus 139 ~~~~~~~~-gi~~~ivrp~~v~g~~~~~----------~~----~---~~-~~~~~~~~~~~~---~~i~~~Dva~~~~~ 196 (221)
T 3ew7_A 139 EHLKSHQA-EFSWTYISPSAMFEPGERT----------GD----Y---QI-GKDHLLFGSDGN---SFISMEDYAIAVLD 196 (221)
T ss_dssp HHHHTTTT-TSCEEEEECSSCCCCC------------------------------------------CCCHHHHHHHHHH
T ss_pred HHHHhhcc-CccEEEEeCcceecCCCcc----------Cc----e---Ee-ccccceecCCCC---ceEeHHHHHHHHHH
Confidence 33443 33 9999999999999984210 10 1 01 123344455543 58899998887776
Q ss_pred ccc
Q psy16545 233 SVH 235 (600)
Q Consensus 233 a~~ 235 (600)
++.
T Consensus 197 ~l~ 199 (221)
T 3ew7_A 197 EIE 199 (221)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.62 E-value=7.4e-16 Score=149.85 Aligned_cols=169 Identities=15% Similarity=0.090 Sum_probs=123.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHHhhhHHhhhhcccccccCCCCEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVI 71 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vi 71 (600)
.|||++|++|+++.+.. ...+.++++++|+ .+|++ +.+.+ ++. ++|+||
T Consensus 25 lVtGatG~iG~~l~~~L--~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~---------~~~--~~D~vi 89 (236)
T 3e8x_A 25 LVVGANGKVARYLLSEL--KNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSH---------AFA--SIDAVV 89 (236)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGG---------GGT--TCSEEE
T ss_pred EEECCCChHHHHHHHHH--HhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHH---------HHc--CCCEEE
Confidence 58999999999996533 2233344444443 44655 33444 555 899999
Q ss_pred EcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q psy16545 72 HFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEE 151 (600)
Q Consensus 72 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~ 151 (600)
||||... ..++...+++|+.++.+++++|++.++++||++||.+.+.. |..+ .+.++|+.+|.++|+
T Consensus 90 ~~ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~--~~~~~Y~~sK~~~e~ 156 (236)
T 3e8x_A 90 FAAGSGP----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGP--MNMRHYLVAKRLADD 156 (236)
T ss_dssp ECCCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSC--GGGHHHHHHHHHHHH
T ss_pred ECCCCCC----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCCh--hhhhhHHHHHHHHHH
Confidence 9999764 35678899999999999999999999999999999544321 1111 356899999999999
Q ss_pred HHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccc
Q psy16545 152 MLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFV 231 (600)
Q Consensus 152 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~ 231 (600)
+++ .. +++++++||+.++|+... ..+....++.+.+++++++|+++.+.
T Consensus 157 ~~~----~~-gi~~~~lrpg~v~~~~~~--------------------------~~~~~~~~~~~~~~~i~~~Dva~~~~ 205 (236)
T 3e8x_A 157 ELK----RS-SLDYTIVRPGPLSNEEST--------------------------GKVTVSPHFSEITRSITRHDVAKVIA 205 (236)
T ss_dssp HHH----HS-SSEEEEEEECSEECSCCC--------------------------SEEEEESSCSCCCCCEEHHHHHHHHH
T ss_pred HHH----HC-CCCEEEEeCCcccCCCCC--------------------------CeEEeccCCCcccCcEeHHHHHHHHH
Confidence 886 33 899999999999998521 12223345555788999999988877
Q ss_pred cccc
Q psy16545 232 NSVH 235 (600)
Q Consensus 232 ~a~~ 235 (600)
.++.
T Consensus 206 ~~~~ 209 (236)
T 3e8x_A 206 ELVD 209 (236)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 6654
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-15 Score=147.36 Aligned_cols=122 Identities=11% Similarity=0.018 Sum_probs=99.2
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.+.+.+.++++ ++|+|||+|+... .+ ...++.|+.++.+++++|++.+++||||+||.++|+
T Consensus 46 ~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~-----~~-~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 117 (227)
T 3dhn_A 46 EHLKVKKADVSSLDEVCEVCK--GADAVISAFNPGW-----NN-PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLF 117 (227)
T ss_dssp TTEEEECCCTTCHHHHHHHHT--TCSEEEECCCC------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSE
T ss_pred CceEEEEecCCCHHHHHHHhc--CCCEEEEeCcCCC-----CC-hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhcc
Confidence 468999999999999999998 8999999997531 12 236788999999999999999999999999999876
Q ss_pred CCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCC
Q psy16545 332 EPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGT 386 (600)
Q Consensus 332 ~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~ 386 (600)
..... ..|+.+..|. ++|+.+| ...|.+++.+.+..+++++++||+. +|+
T Consensus 118 ~~~~~-~~~~~~~~p~-~~Y~~sK---~~~e~~~~~~~~~~~~~~~ilrp~~v~g~ 168 (227)
T 3dhn_A 118 IAPGL-RLMDSGEVPE-NILPGVK---ALGEFYLNFLMKEKEIDWVFFSPAADMRP 168 (227)
T ss_dssp EETTE-EGGGTTCSCG-GGHHHHH---HHHHHHHHTGGGCCSSEEEEEECCSEEES
T ss_pred CCCCC-ccccCCcchH-HHHHHHH---HHHHHHHHHHhhccCccEEEEeCCcccCC
Confidence 54432 3455565564 8999999 7789999999878899999999987 544
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=7.1e-16 Score=159.06 Aligned_cols=173 Identities=16% Similarity=0.123 Sum_probs=129.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
.|||++|++|+.+.+.... .+.++++++|. .+|+.|.+++.+ +++..
T Consensus 14 lVtGatG~iG~~l~~~L~~--~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~---------~~~~~ 82 (346)
T 3i6i_A 14 LIAGATGFIGQFVATASLD--AHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEK---------ILKEH 82 (346)
T ss_dssp EEECTTSHHHHHHHHHHHH--TTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHH---------HHHHT
T ss_pred EEECCCcHHHHHHHHHHHH--CCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHH---------HHhhC
Confidence 5899999999999653322 22334444442 589999999988 66555
Q ss_pred CCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcC-CCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHH
Q psy16545 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGK 144 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~ 144 (600)
++|+|||+|+.. |+.++.+|+++|++.+ +++||+ | +|| .+.+|..+. .|.++|+.
T Consensus 83 ~~d~Vi~~a~~~---------------n~~~~~~l~~aa~~~g~v~~~v~-S---~~g----~~~~e~~~~-~p~~~y~~ 138 (346)
T 3i6i_A 83 EIDIVVSTVGGE---------------SILDQIALVKAMKAVGTIKRFLP-S---EFG----HDVNRADPV-EPGLNMYR 138 (346)
T ss_dssp TCCEEEECCCGG---------------GGGGHHHHHHHHHHHCCCSEEEC-S---CCS----SCTTTCCCC-TTHHHHHH
T ss_pred CCCEEEECCchh---------------hHHHHHHHHHHHHHcCCceEEee-c---ccC----CCCCccCcC-CCcchHHH
Confidence 899999999862 7788999999999999 999886 4 355 235677777 78899999
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceE
Q psy16545 145 TKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKV 224 (600)
Q Consensus 145 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~ 224 (600)
+|..+|++++. . +++++++||+.++|..... +..... . ....+.+.++|+|.+.+++++++
T Consensus 139 sK~~~e~~l~~----~-g~~~tivrpg~~~g~~~~~------------~~~~~~-~-~~~~~~~~~~g~g~~~~~~i~~~ 199 (346)
T 3i6i_A 139 EKRRVRQLVEE----S-GIPFTYICCNSIASWPYYN------------NIHPSE-V-LPPTDFFQIYGDGNVKAYFVAGT 199 (346)
T ss_dssp HHHHHHHHHHH----T-TCCBEEEECCEESSCCCSC------------C------C-CCCSSCEEEETTSCCCEEEECHH
T ss_pred HHHHHHHHHHH----c-CCCEEEEEecccccccCcc------------cccccc-c-cCCCceEEEccCCCceEEecCHH
Confidence 99999998876 2 8999999999999974211 111111 1 12445788999999999999999
Q ss_pred Eeeecccccc
Q psy16545 225 VAIDNFVNSV 234 (600)
Q Consensus 225 d~v~~~~~a~ 234 (600)
|+++.+..++
T Consensus 200 Dva~~~~~~l 209 (346)
T 3i6i_A 200 DIGKFTMKTV 209 (346)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9888766553
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.60 E-value=1.3e-15 Score=152.51 Aligned_cols=164 Identities=11% Similarity=0.031 Sum_probs=121.6
Q ss_pred CCCCcchHHHHHHHhhhccCC--CccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGK--PVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVI 71 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~--~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vi 71 (600)
|||++|++|+++.+. +... +.++++++|+ .+|+.|.+++.+ +++ ++|+||
T Consensus 5 VtGatG~iG~~l~~~--L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~---------~~~--~~d~vi 71 (287)
T 2jl1_A 5 VTGATGQLGGLVIQH--LLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQK---------AFA--GVSKLL 71 (287)
T ss_dssp ETTTTSHHHHHHHHH--HTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHH---------HTT--TCSEEE
T ss_pred EEcCCchHHHHHHHH--HHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHH---------HHh--cCCEEE
Confidence 799999999999653 3332 4445544443 579999988888 776 799999
Q ss_pred EcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q psy16545 72 HFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEE 151 (600)
Q Consensus 72 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~ 151 (600)
|+|+.. . . -++|+.++.+++++|++.++++||++||.++|. .| .+|+.+|..+|+
T Consensus 72 ~~a~~~-~----~-----~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--------------~~-~~y~~~K~~~E~ 126 (287)
T 2jl1_A 72 FISGPH-Y----D-----NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE--------------SI-IPLAHVHLATEY 126 (287)
T ss_dssp ECCCCC-S----C-----HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG--------------CC-STHHHHHHHHHH
T ss_pred EcCCCC-c----C-----chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--------------CC-CchHHHHHHHHH
Confidence 999862 1 1 167999999999999999999999999987763 12 489999999999
Q ss_pred HHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccc
Q psy16545 152 MLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFV 231 (600)
Q Consensus 152 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~ 231 (600)
+++. . +++++++||+.++|+.. ..++. +.+. .+ .+. ++.|.+.+++++++|+++.+.
T Consensus 127 ~~~~----~-~~~~~ilrp~~~~~~~~------------~~~~~---~~~~-~~-~~~-~~~~~~~~~~i~~~Dva~~~~ 183 (287)
T 2jl1_A 127 AIRT----T-NIPYTFLRNALYTDFFV------------NEGLR---ASTE-SG-AIV-TNAGSGIVNSVTRNELALAAA 183 (287)
T ss_dssp HHHH----T-TCCEEEEEECCBHHHHS------------SGGGH---HHHH-HT-EEE-ESCTTCCBCCBCHHHHHHHHH
T ss_pred HHHH----c-CCCeEEEECCEeccccc------------hhhHH---HHhh-CC-cee-ccCCCCccCccCHHHHHHHHH
Confidence 8864 3 89999999998887631 11222 2222 11 232 567788999999999888666
Q ss_pred cc
Q psy16545 232 NS 233 (600)
Q Consensus 232 ~a 233 (600)
.+
T Consensus 184 ~~ 185 (287)
T 2jl1_A 184 TV 185 (287)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.3e-15 Score=144.98 Aligned_cols=179 Identities=9% Similarity=-0.004 Sum_probs=122.8
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEEEc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHF 73 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~ 73 (600)
|||++|++|+.+.+... ..+.++++++|+ .+|++|.++ + .+. ++|+||||
T Consensus 5 VtGatG~iG~~l~~~L~--~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~---------~~~--~~d~vi~~ 69 (224)
T 3h2s_A 5 VLGATGRAGSAIVAEAR--RRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--A---------DLD--SVDAVVDA 69 (224)
T ss_dssp EETTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--H---------HHT--TCSEEEEC
T ss_pred EEcCCCHHHHHHHHHHH--HCCCEEEEEEecccccccccCCCceEEecccccccH--h---------hcc--cCCEEEEC
Confidence 79999999999965322 222333333333 678888776 4 455 79999999
Q ss_pred CcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccC-CCCC--CCCCCCCCCCCCCChHHHHHHHHH
Q psy16545 74 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG-EPQF--LPITEDHPTGNIKNVYGKTKHFIE 150 (600)
Q Consensus 74 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg-~~~~--~~~~E~~~~~~p~s~Y~~sK~~~e 150 (600)
||.... ....+.|+.++.+++++|++.+ +++|++||++.+. .... .+.+|...+ .|.+.|+.+|..+|
T Consensus 70 ag~~~~-------~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~-~~~~~y~~sK~~~e 140 (224)
T 3h2s_A 70 LSVPWG-------SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESA-ASQPWYDGALYQYY 140 (224)
T ss_dssp CCCCTT-------SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGG-GGSTTHHHHHHHHH
T ss_pred CccCCC-------cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCC-ccchhhHHHHHHHH
Confidence 998621 1135789999999999999999 8999999986543 3222 244555555 56899999999999
Q ss_pred HHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeecc
Q psy16545 151 EMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNF 230 (600)
Q Consensus 151 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~ 230 (600)
. ++.+.++. +++++++||+.+||+.....+ ..+. ..++ .+.+.+++++++|+++.+
T Consensus 141 ~-~~~~~~~~-~i~~~ivrp~~v~g~~~~~~~------------------~~~~-~~~~---~~~~~~~~i~~~DvA~~~ 196 (224)
T 3h2s_A 141 E-YQFLQMNA-NVNWIGISPSEAFPSGPATSY------------------VAGK-DTLL---VGEDGQSHITTGNMALAI 196 (224)
T ss_dssp H-HHHHTTCT-TSCEEEEEECSBCCCCCCCCE------------------EEES-SBCC---CCTTSCCBCCHHHHHHHH
T ss_pred H-HHHHHhcC-CCcEEEEcCccccCCCcccCc------------------eecc-cccc---cCCCCCceEeHHHHHHHH
Confidence 4 45555444 999999999999999532100 0111 1222 133456899999998887
Q ss_pred ccccc
Q psy16545 231 VNSVH 235 (600)
Q Consensus 231 ~~a~~ 235 (600)
..++.
T Consensus 197 ~~~l~ 201 (224)
T 3h2s_A 197 LDQLE 201 (224)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 76654
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.58 E-value=3.6e-15 Score=145.45 Aligned_cols=176 Identities=13% Similarity=0.044 Sum_probs=124.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCc--cEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPV--PYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCV 70 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~--~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~V 70 (600)
.|||++|++|+++.+... ..+. ++++++|+ .+|++|.+++.+ +++ ++|+|
T Consensus 22 lVtGasg~iG~~l~~~L~--~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~---------~~~--~~d~v 88 (242)
T 2bka_A 22 FILGASGETGRVLLKEIL--EQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYAS---------AFQ--GHDVG 88 (242)
T ss_dssp EEECTTSHHHHHHHHHHH--HHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGG---------GGS--SCSEE
T ss_pred EEECCCcHHHHHHHHHHH--cCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHH---------Hhc--CCCEE
Confidence 589999999999965332 2223 34444443 478888888877 676 89999
Q ss_pred EEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q psy16545 71 IHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIE 150 (600)
Q Consensus 71 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e 150 (600)
|||||..... .++...+++|+.++.+++++|++.++++||++||.++|+ .+.++|+.+|.++|
T Consensus 89 i~~ag~~~~~---~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~--------------~~~~~Y~~sK~~~e 151 (242)
T 2bka_A 89 FCCLGTTRGK---AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK--------------SSNFLYLQVKGEVE 151 (242)
T ss_dssp EECCCCCHHH---HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--------------TCSSHHHHHHHHHH
T ss_pred EECCCccccc---CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCC--------------CCcchHHHHHHHHH
Confidence 9999975322 235678999999999999999999989999999998875 23478999999999
Q ss_pred HHHHHHHhhcCCc-eEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeec
Q psy16545 151 EMLKDLSKAHKEW-NIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDN 229 (600)
Q Consensus 151 ~~~~~~~~~~~~~-~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~ 229 (600)
.+++.+ ++ +++++|||.+|||... ......+.+...+.. +. .++. ..+++++|+++.
T Consensus 152 ~~~~~~-----~~~~~~~vrpg~v~~~~~~-----------~~~~~~~~~~~~~~~-~~-~~~~----~~~~~~~dva~~ 209 (242)
T 2bka_A 152 AKVEEL-----KFDRYSVFRPGVLLCDRQE-----------SRPGEWLVRKFFGSL-PD-SWAS----GHSVPVVTVVRA 209 (242)
T ss_dssp HHHHTT-----CCSEEEEEECCEEECTTGG-----------GSHHHHHHHHHHCSC-CT-TGGG----GTEEEHHHHHHH
T ss_pred HHHHhc-----CCCCeEEEcCceecCCCCC-----------CcHHHHHHHHhhccc-Cc-cccC----CcccCHHHHHHH
Confidence 988653 67 5999999999999521 112333333332211 10 1121 247888888776
Q ss_pred cccccc
Q psy16545 230 FVNSVH 235 (600)
Q Consensus 230 ~~~a~~ 235 (600)
+...+.
T Consensus 210 ~~~~~~ 215 (242)
T 2bka_A 210 MLNNVV 215 (242)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 665543
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.54 E-value=7.1e-15 Score=144.39 Aligned_cols=156 Identities=12% Similarity=0.029 Sum_probs=116.4
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc--------cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVG 80 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~ 80 (600)
|||++|++|+++.+. +...+.+++.++|+ .+|+++.+++.+++++ . ..++|+||||||....
T Consensus 6 VtGasg~iG~~l~~~--L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~-----~--~~~~d~vi~~Ag~~~~- 75 (255)
T 2dkn_A 6 ITGSASGIGAALKEL--LARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDR-----C--GGVLDGLVCCAGVGVT- 75 (255)
T ss_dssp EETTTSHHHHHHHHH--HHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHH-----H--TTCCSEEEECCCCCTT-
T ss_pred EeCCCcHHHHHHHHH--HHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHH-----c--CCCccEEEECCCCCCc-
Confidence 899999999999663 33345667766765 4788888888874432 1 1279999999997642
Q ss_pred cCCCChhhhHHhHHHHHHHHHHHHHHc----CCCeEEEecCccccCCCCC-CCC-------CCCC-------CCCCCCCh
Q psy16545 81 ESMQEPLMYYKNNLIATINLLEVMKSH----GVYQLVFSSSCTVYGEPQF-LPI-------TEDH-------PTGNIKNV 141 (600)
Q Consensus 81 ~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~r~I~~SS~~vyg~~~~-~~~-------~E~~-------~~~~p~s~ 141 (600)
..++...+++|+.++.++++++.+. +.+++|++||..+|+.... .+. +|+. +. .+.+.
T Consensus 76 --~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 152 (255)
T 2dkn_A 76 --AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQG-QTHLA 152 (255)
T ss_dssp --SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHC-CHHHH
T ss_pred --chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccC-Ccchh
Confidence 3567889999999999999987654 5679999999988864311 111 1111 12 35678
Q ss_pred HHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 142 YGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
|+.||.+.|.+++.+++++ .+++++++|||.++|+.
T Consensus 153 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~ 190 (255)
T 2dkn_A 153 YAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPL 190 (255)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchh
Confidence 9999999999999988763 38999999999999984
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=9.2e-15 Score=146.22 Aligned_cols=161 Identities=12% Similarity=-0.009 Sum_probs=115.9
Q ss_pred CCCCcchHHHHHHHhhhccCC--CccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGK--PVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVI 71 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~--~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vi 71 (600)
|||++|++|+++.+. +... +.++++++|+ .+|+.|.+++.+ +++ ++|+||
T Consensus 4 VtGatG~iG~~l~~~--L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~---------~~~--~~d~vi 70 (286)
T 2zcu_A 4 ITGATGQLGHYVIES--LMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTS---------ALQ--GVEKLL 70 (286)
T ss_dssp EESTTSHHHHHHHHH--HTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHH---------HTT--TCSEEE
T ss_pred EEcCCchHHHHHHHH--HHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHH---------HHh--CCCEEE
Confidence 799999999999653 3333 4455555543 579999988888 776 799999
Q ss_pred EcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q psy16545 72 HFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEE 151 (600)
Q Consensus 72 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~ 151 (600)
|+|+... ..|+.++.+++++|++.++++||++||.++|. .| .+|+.+|..+|+
T Consensus 71 ~~a~~~~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--------------~~-~~y~~sK~~~e~ 123 (286)
T 2zcu_A 71 LISSSEV------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT--------------SP-LGLADEHIETEK 123 (286)
T ss_dssp ECC--------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT--------------CC-STTHHHHHHHHH
T ss_pred EeCCCCc------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--------------Cc-chhHHHHHHHHH
Confidence 9998531 14788999999999999999999999987762 12 489999999999
Q ss_pred HHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccc
Q psy16545 152 MLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFV 231 (600)
Q Consensus 152 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~ 231 (600)
+++. . +++++++||+.++++. .+.+.+...+ +.+. +++|.+.+++++++|+++.+.
T Consensus 124 ~~~~----~-~~~~~ilrp~~~~~~~----------------~~~~~~~~~~--~~~~-~~~~~~~~~~i~~~Dva~~~~ 179 (286)
T 2zcu_A 124 MLAD----S-GIVYTLLRNGWYSENY----------------LASAPAALEH--GVFI-GAAGDGKIASATRADYAAAAA 179 (286)
T ss_dssp HHHH----H-CSEEEEEEECCBHHHH----------------HTTHHHHHHH--TEEE-ESCTTCCBCCBCHHHHHHHHH
T ss_pred HHHH----c-CCCeEEEeChHHhhhh----------------HHHhHHhhcC--Ccee-ccCCCCccccccHHHHHHHHH
Confidence 8865 2 8999999998766542 1122222221 2444 677889999999999887665
Q ss_pred cc
Q psy16545 232 NS 233 (600)
Q Consensus 232 ~a 233 (600)
.+
T Consensus 180 ~~ 181 (286)
T 2zcu_A 180 RV 181 (286)
T ss_dssp HH
T ss_pred HH
Confidence 44
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.53 E-value=5.6e-15 Score=141.84 Aligned_cols=112 Identities=12% Similarity=0.064 Sum_probs=91.8
Q ss_pred CceeEEEeecCC-hhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 252 KKVDFYSCDLVD-KNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~-~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
.+++++.+|+.+ .+++.++++ ++|+|||+|+.... ..++.|+.++.+++++|++.+++|||++||..+|
T Consensus 41 ~~~~~~~~D~~d~~~~~~~~~~--~~d~vi~~ag~~~~--------~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~ 110 (219)
T 3dqp_A 41 NNVKAVHFDVDWTPEEMAKQLH--GMDAIINVSGSGGK--------SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSL 110 (219)
T ss_dssp TTEEEEECCTTSCHHHHHTTTT--TCSEEEECCCCTTS--------SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTT
T ss_pred CCceEEEecccCCHHHHHHHHc--CCCEEEECCcCCCC--------CcEeEeHHHHHHHHHHHHHhCCCEEEEECccccc
Confidence 468999999999 999999998 89999999997541 2567899999999999999999999999998877
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeeccc
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL 384 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~ 384 (600)
+.. +.+| .+..| .+.|+.+| ..+|.+++ +..+++++++||+.+
T Consensus 111 ~~~---~~~e-~~~~~-~~~Y~~sK---~~~e~~~~---~~~~i~~~ilrp~~v 153 (219)
T 3dqp_A 111 QPE---KWIG-AGFDA-LKDYYIAK---HFADLYLT---KETNLDYTIIQPGAL 153 (219)
T ss_dssp CGG---GCCS-HHHHH-THHHHHHH---HHHHHHHH---HSCCCEEEEEEECSE
T ss_pred CCC---cccc-ccccc-ccHHHHHH---HHHHHHHH---hccCCcEEEEeCceE
Confidence 643 3344 33333 37899999 77888886 567999999998873
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.52 E-value=5.9e-14 Score=138.46 Aligned_cols=153 Identities=12% Similarity=0.024 Sum_probs=117.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------cccccChHHhhhHHhhhhccccccc-CCCCEEEEcC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFA 74 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A 74 (600)
-|||++|.+|+++++. +...+.+++.++|+ .+|++|++++.+++++ +.+. .++|+|||||
T Consensus 32 lVTGas~gIG~aia~~--l~~~G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g~iD~lv~nA 104 (260)
T 3un1_A 32 VITGASQGIGAGLVRA--YRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVRE-----GIERFGRIDSLVNNA 104 (260)
T ss_dssp EESSCSSHHHHHHHHH--HHHTTCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHH-----HHHHHSCCCEEEECC
T ss_pred EEeCCCCHHHHHHHHH--HHHCCCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHH-----HHHHCCCCCEEEECC
Confidence 4899999999999663 33334444444444 6899999998885554 3332 2699999999
Q ss_pred cccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHH
Q psy16545 75 AVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTK 146 (600)
Q Consensus 75 ~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK 146 (600)
|...... ..+++...+++|+.|+.++++++ ++.+.+++|++||...+... +. .+...|+.||
T Consensus 105 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------~~-~~~~~Y~~sK 174 (260)
T 3un1_A 105 GVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM---------VG-MPSALASLTK 174 (260)
T ss_dssp CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB---------TT-CCCHHHHHHH
T ss_pred CCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC---------CC-CccHHHHHHH
Confidence 9864322 23456678999999999999987 45667899999998665321 22 4668999999
Q ss_pred HHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 147 HFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 147 ~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.+++.++.++ .|+++++++||.|++|.
T Consensus 175 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 207 (260)
T 3un1_A 175 GGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPM 207 (260)
T ss_dssp HHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTT
T ss_pred HHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCC
Confidence 99999999999886 38999999999999985
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=4.9e-14 Score=138.01 Aligned_cols=145 Identities=19% Similarity=0.094 Sum_probs=106.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------cccccChHHhhhHHhhhhcccccccCCCCEEEEc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHF 73 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~ 73 (600)
.|||++|++|+++.+.....+.+.+++.++|+ .+|++|.+++.+ +++ ++|+||||
T Consensus 8 lVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~---------~~~--~~d~vi~~ 76 (253)
T 1xq6_A 8 LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINP---------AFQ--GIDALVIL 76 (253)
T ss_dssp EEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHH---------HHT--TCSEEEEC
T ss_pred EEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHH---------HHc--CCCEEEEe
Confidence 48999999999996543222113444444443 579999998888 666 79999999
Q ss_pred CcccCccc-------------CCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCC--
Q psy16545 74 AAVKAVGE-------------SMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNI-- 138 (600)
Q Consensus 74 A~~~~~~~-------------~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p-- 138 (600)
||...... ........+++|+.++.+++++|++.++++||++||.+++.. ..+. .+
T Consensus 77 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~--------~~~~-~~~~ 147 (253)
T 1xq6_A 77 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP--------DHPL-NKLG 147 (253)
T ss_dssp CCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT--------TCGG-GGGG
T ss_pred ccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC--------CCcc-cccc
Confidence 99764211 112223468999999999999999999999999999876531 1122 12
Q ss_pred CChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~ 177 (600)
.+.|+.+|.++|.+++. . +++++++||+.+||+.
T Consensus 148 ~~~y~~sK~~~e~~~~~----~-~i~~~~vrpg~v~~~~ 181 (253)
T 1xq6_A 148 NGNILVWKRKAEQYLAD----S-GTPYTIIRAGGLLDKE 181 (253)
T ss_dssp GCCHHHHHHHHHHHHHT----S-SSCEEEEEECEEECSC
T ss_pred chhHHHHHHHHHHHHHh----C-CCceEEEecceeecCC
Confidence 24588899999998764 3 8999999999999996
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.3e-14 Score=135.70 Aligned_cols=145 Identities=10% Similarity=0.084 Sum_probs=114.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCccc--
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGE-- 81 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~-- 81 (600)
-|||++|++|+.+.+. +. .+.+++.++|+ .+|+++.+++.+++++ . .++|+||||||......
T Consensus 7 lVtGasg~iG~~~~~~--l~-~g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~-----~---~~~d~vi~~ag~~~~~~~~ 75 (202)
T 3d7l_A 7 LLIGASGTLGSAVKER--LE-KKAEVITAGRHSGDVTVDITNIDSIKKMYEQ-----V---GKVDAIVSATGSATFSPLT 75 (202)
T ss_dssp EEETTTSHHHHHHHHH--HT-TTSEEEEEESSSSSEECCTTCHHHHHHHHHH-----H---CCEEEEEECCCCCCCCCGG
T ss_pred EEEcCCcHHHHHHHHH--HH-CCCeEEEEecCccceeeecCCHHHHHHHHHH-----h---CCCCEEEECCCCCCCCChh
Confidence 4899999999999664 44 56777777877 6899999999884432 1 26899999999764322
Q ss_pred --CCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q psy16545 82 --SMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDL 156 (600)
Q Consensus 82 --~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~ 156 (600)
..+++...+++|+.++.++++++.+. + +++|++||...+. +. .+.+.|+.||.+.|.+++.+
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~-----------~~-~~~~~Y~~sK~~~~~~~~~~ 142 (202)
T 3d7l_A 76 ELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMED-----------PI-VQGASAAMANGAVTAFAKSA 142 (202)
T ss_dssp GCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTS-----------CC-TTCHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcC-----------CC-CccHHHHHHHHHHHHHHHHH
Confidence 12344568899999999999999876 4 6899999976543 22 45689999999999999999
Q ss_pred Hhhc-CCceEEEEecccccCC
Q psy16545 157 SKAH-KEWNIISLRYFNPVGA 176 (600)
Q Consensus 157 ~~~~-~~~~~~ilR~~~v~G~ 176 (600)
+.+. .+++++++|||.++++
T Consensus 143 ~~e~~~gi~v~~v~pg~v~~~ 163 (202)
T 3d7l_A 143 AIEMPRGIRINTVSPNVLEES 163 (202)
T ss_dssp TTSCSTTCEEEEEEECCBGGG
T ss_pred HHHccCCeEEEEEecCccCCc
Confidence 8764 3899999999999998
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.4e-14 Score=136.02 Aligned_cols=145 Identities=14% Similarity=0.136 Sum_probs=112.5
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHHhhhHHhhhhcccccccCCCCEEEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIH 72 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih 72 (600)
|||++|++|+++.+. +... +++.++|+ .+|++|++++.+++++ + .++|+|||
T Consensus 5 VtGasg~iG~~la~~--l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------~--~~id~vi~ 72 (207)
T 2yut_A 5 ITGATGGLGGAFARA--LKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEE------A--GPLDLLVH 72 (207)
T ss_dssp EETTTSHHHHHHHHH--TTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHH------H--CSEEEEEE
T ss_pred EEcCCcHHHHHHHHH--HHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHh------c--CCCCEEEE
Confidence 799999999999653 3332 45555554 4799999988883321 1 26999999
Q ss_pred cCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q psy16545 73 FAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHF 148 (600)
Q Consensus 73 ~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~ 148 (600)
|||..... ...+++...+++|+.++.++++++++.+.++||++||...|.. . .+.+.|+.||.+
T Consensus 73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~-----------~-~~~~~Y~~sK~a 140 (207)
T 2yut_A 73 AVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQ-----------V-PGFAAYAAAKGA 140 (207)
T ss_dssp CCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHS-----------S-TTBHHHHHHHHH
T ss_pred CCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccC-----------C-CCcchHHHHHHH
Confidence 99986432 1345677799999999999999997667789999999887642 2 466899999999
Q ss_pred HHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 149 IEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 149 ~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.|.+++.++.++ .+++++++|||.++++.
T Consensus 141 ~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~ 171 (207)
T 2yut_A 141 LEAYLEAARKELLREGVHLVLVRLPAVATGL 171 (207)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEECCCCBCSGG
T ss_pred HHHHHHHHHHHHhhhCCEEEEEecCcccCCC
Confidence 999999998774 38999999999999873
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1e-14 Score=147.08 Aligned_cols=175 Identities=12% Similarity=0.006 Sum_probs=120.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------cccccChHHhhhHHhhhhcccccccCCCCEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------EGDIVSMYANTDLAQKELGWSARCTHDIDCV 70 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~V 70 (600)
.|||++|++|+++.+.....+ +.++++++|+ .+|+.|++++.+ +++ ++|+|
T Consensus 9 lVtGatG~iG~~l~~~L~~~g-~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~---------~~~--~~d~v 76 (299)
T 2wm3_A 9 VVFGGTGAQGGSVARTLLEDG-TFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMEL---------ALN--GAYAT 76 (299)
T ss_dssp EEETTTSHHHHHHHHHHHHHC-SSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHH---------HHT--TCSEE
T ss_pred EEECCCchHHHHHHHHHHhcC-CceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHH---------HHh--cCCEE
Confidence 589999999999965322111 0233333332 579999998888 776 79999
Q ss_pred EEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q psy16545 71 IHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIE 150 (600)
Q Consensus 71 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e 150 (600)
||+|+.... ...+.|+.++.+++++|++.++++||++||.++|+... . .+.++|+.+|..+|
T Consensus 77 i~~a~~~~~--------~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~------~----~~~~~y~~sK~~~e 138 (299)
T 2wm3_A 77 FIVTNYWES--------CSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTA------G----RLAAAHFDGKGEVE 138 (299)
T ss_dssp EECCCHHHH--------TCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTT------T----SCCCHHHHHHHHHH
T ss_pred EEeCCCCcc--------ccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCC------C----cccCchhhHHHHHH
Confidence 999985321 02456889999999999999999999988888776321 1 23478999999999
Q ss_pred HHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEE-EecCCcccccCcceEEeeec
Q psy16545 151 EMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFT-VFGADYETEDGTGKVVAIDN 229 (600)
Q Consensus 151 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~g~g~~~~~~~~v~d~v~~ 229 (600)
++++.. +++++++||+++||+... .+++ .....++... .+..|.+.+++++++|+++.
T Consensus 139 ~~~~~~-----gi~~~ilrp~~~~~~~~~------------~~~~----~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~ 197 (299)
T 2wm3_A 139 EYFRDI-----GVPMTSVRLPCYFENLLS------------HFLP----QKAPDGKSYLLSLPTGDVPMDGMSVSDLGPV 197 (299)
T ss_dssp HHHHHH-----TCCEEEEECCEEGGGGGT------------TTCC----EECTTSSSEEECCCCTTSCEEEECGGGHHHH
T ss_pred HHHHHC-----CCCEEEEeecHHhhhchh------------hcCC----cccCCCCEEEEEecCCCCccceecHHHHHHH
Confidence 998752 899999999999997421 0111 0111222211 13346678889999988776
Q ss_pred cccc
Q psy16545 230 FVNS 233 (600)
Q Consensus 230 ~~~a 233 (600)
+..+
T Consensus 198 ~~~~ 201 (299)
T 2wm3_A 198 VLSL 201 (299)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.50 E-value=5.5e-14 Score=140.41 Aligned_cols=151 Identities=17% Similarity=0.087 Sum_probs=111.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||++|++|+++++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .++|
T Consensus 9 lVTGas~gIG~~~a~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~-----~~~~~g~id 81 (281)
T 3m1a_A 9 LVTGASSGFGRAIAEAA--VAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAAD-----VLARYGRVD 81 (281)
T ss_dssp EETTTTSHHHHHHHHHH--HHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHH-----HHHHHSCCS
T ss_pred EEECCCChHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHH-----HHHhCCCCC
Confidence 48999999999996532 2223333333332 6899999998885544 3222 2699
Q ss_pred EEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHH----HHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEV----MKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 69 ~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a----~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+||||||..... ...+++...+++|+.|+.+++++ +++.+.+++|++||...+. +. .+.+
T Consensus 82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~-~~~~ 149 (281)
T 3m1a_A 82 VLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL-----------SF-AGFS 149 (281)
T ss_dssp EEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CC-TTCH
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC-----------CC-CCch
Confidence 999999986432 22345667899999995555554 5666778999999986553 23 5678
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+|+.||.+.|.+++.++.++ .+++++++|||.+.++.
T Consensus 150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (281)
T 3m1a_A 150 AYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNL 188 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccccc
Confidence 99999999999999998873 28999999999999885
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=9.4e-14 Score=136.45 Aligned_cols=151 Identities=14% Similarity=0.113 Sum_probs=113.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|++|+++.+ .+...+.+++.++|+ .+|++|++++.+++++ +.+. .
T Consensus 15 lVtGasggiG~~la~--~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 87 (255)
T 1fmc_A 15 IITGAGAGIGKEIAI--TFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADF-----AISKLG 87 (255)
T ss_dssp EETTTTSHHHHHHHH--HHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHHS
T ss_pred EEECCccHHHHHHHH--HHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHH-----HHHhcC
Confidence 589999999999955 333334444444442 5899999988885543 2222 2
Q ss_pred CCCEEEEcCcccCcc---cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVG---ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~---~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
++|+||||||..... ...+++...+++|+.++.++++++. +.+.+++|++||...+.. . .+
T Consensus 88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~-~~ 155 (255)
T 1fmc_A 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----------N-IN 155 (255)
T ss_dssp SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------C-TT
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC-----------C-CC
Confidence 699999999986432 1234566789999999999999874 446789999999877642 2 46
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.++|+.||.+.|.+++.++.++ .+++++++|||.++++.
T Consensus 156 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~ 196 (255)
T 1fmc_A 156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA 196 (255)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred CcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchh
Confidence 6899999999999999988765 38999999999999984
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.48 E-value=1.1e-13 Score=135.06 Aligned_cols=147 Identities=15% Similarity=0.049 Sum_probs=111.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------cccccChHHhhhHHhhhhcccccccC-CCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------EGDIVSMYANTDLAQKELGWSARCTH-DIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~ 69 (600)
-|||++|++|+++.+.. ...+.+++.++|+ .+|+++.+++.+ +++.. ++|+
T Consensus 11 lVTGasggiG~~~a~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---------~~~~~~~id~ 79 (244)
T 1cyd_A 11 LVTGAGKGIGRDTVKAL--HASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEK---------ALGGIGPVDL 79 (244)
T ss_dssp EEESTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHH---------HHTTCCCCSE
T ss_pred EEeCCCchHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHH---------HHHHcCCCCE
Confidence 58999999999996533 2233344444443 579999998888 44432 5899
Q ss_pred EEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc----C-CCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 70 VIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G-VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 70 Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
||||||...... ..+++...+++|+.++.++++++.+. + .++||++||...+.. . .+.+
T Consensus 80 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~-~~~~ 147 (244)
T 1cyd_A 80 LVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT-----------F-PNLI 147 (244)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------C-TTBH
T ss_pred EEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCC-----------C-CCcc
Confidence 999999764321 23456678999999999999887553 4 579999999877653 2 3567
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.|+.||.+.|.+++.++.++ .+++++++|||.++|+.
T Consensus 148 ~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~ 186 (244)
T 1cyd_A 148 TYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM 186 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence 89999999999999998774 38999999999999984
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=8.2e-14 Score=143.51 Aligned_cols=196 Identities=13% Similarity=0.150 Sum_probs=140.9
Q ss_pred HHHHhhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Q psy16545 244 RAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLV 322 (600)
Q Consensus 244 ~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~r~v 322 (600)
..+..+...+++++.+|+.|.+++.++++..++|+|||+|+.. |+.++.+++++|++.+ ++|||
T Consensus 52 ~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~---------------n~~~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 52 KIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVSTVGGE---------------SILDQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp HHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEECCCGG---------------GGGGHHHHHHHHHHHCCCSEEE
T ss_pred HHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEECCchh---------------hHHHHHHHHHHHHHcCCceEEe
Confidence 3344555678999999999999999999877899999999862 7888999999999999 99999
Q ss_pred EecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeeccc-CCCCcchHHHHHHHHHH
Q psy16545 323 FSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL-GTGQGTSVLQLLRTFER 401 (600)
Q Consensus 323 ~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~-g~~~~~~~~~~~~~~~~ 401 (600)
+ | +||. +.+|+.+..|. +.|+.+| ..+|.+++. .+++++++||+.+ |......
T Consensus 117 ~-S---~~g~----~~~e~~~~~p~-~~y~~sK---~~~e~~l~~----~g~~~tivrpg~~~g~~~~~~---------- 170 (346)
T 3i6i_A 117 P-S---EFGH----DVNRADPVEPG-LNMYREK---RRVRQLVEE----SGIPFTYICCNSIASWPYYNN---------- 170 (346)
T ss_dssp C-S---CCSS----CTTTCCCCTTH-HHHHHHH---HHHHHHHHH----TTCCBEEEECCEESSCCCSCC----------
T ss_pred e-c---ccCC----CCCccCcCCCc-chHHHHH---HHHHHHHHH----cCCCEEEEEecccccccCccc----------
Confidence 6 3 4663 34666666554 7899999 667777764 6899999998764 2100000
Q ss_pred HhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcc
Q psy16545 402 VTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGT 481 (600)
Q Consensus 402 ~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 481 (600)
..+.. .. ..+..+++ +++|++.
T Consensus 171 -------------~~~~~-----------------~~------------------------~~~~~~~~----~g~g~~~ 192 (346)
T 3i6i_A 171 -------------IHPSE-----------------VL------------------------PPTDFFQI----YGDGNVK 192 (346)
T ss_dssp -----------------------------------CC------------------------CCSSCEEE----ETTSCCC
T ss_pred -------------ccccc-----------------cc------------------------CCCceEEE----ccCCCce
Confidence 00000 00 00122222 2333333
Q ss_pred cchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCC-ceeEeEcCC-CCCccHHHHHHHHhhhcCCccc
Q psy16545 482 SVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV-PYIFYNLGT-GQGTSVLQLLRTFERVTGKPVP 559 (600)
Q Consensus 482 ~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~-~~~~~nl~~-~~~~s~~e~~~~~~~~~g~~~~ 559 (600)
++|+| ++|+++++..++..+. .+++||+.+ ++.+|+.|+++++++.+|.+.+
T Consensus 193 ------~~~i~--------------------~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~ 246 (346)
T 3i6i_A 193 ------AYFVA--------------------GTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLP 246 (346)
T ss_dssp ------EEEEC--------------------HHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCC
T ss_pred ------EEecC--------------------HHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCc
Confidence 78888 8999999999988753 378899975 5899999999999999998766
Q ss_pred ccccC
Q psy16545 560 YIVEA 564 (600)
Q Consensus 560 ~~~~~ 564 (600)
+...+
T Consensus 247 ~~~~~ 251 (346)
T 3i6i_A 247 RVTVT 251 (346)
T ss_dssp EEEEC
T ss_pred eEecC
Confidence 65543
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.5e-13 Score=136.05 Aligned_cols=206 Identities=14% Similarity=0.145 Sum_probs=138.8
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
..+++++.+|+.|++.+.++++ ++|+|||+|+.... ...|+.++.+++++|++.+++||||+||.
T Consensus 43 ~~~v~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~--- 107 (289)
T 3e48_A 43 RGKVSVRQLDYFNQESMVEAFK--GMDTVVFIPSIIHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYY--- 107 (289)
T ss_dssp BTTBEEEECCTTCHHHHHHHTT--TCSEEEECCCCCCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEES---
T ss_pred hCCCEEEEcCCCCHHHHHHHHh--CCCEEEEeCCCCcc----------chhhHHHHHHHHHHHHHcCCCEEEEEccc---
Confidence 4578999999999999999998 89999999986432 13488999999999999999999999993
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeeccc-CCCCcchHHHHHHHHHHHhCCCCcc
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL-GTGQGTSVLQLLRTFERVTGNKPVP 409 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~-g~~~~~~~~~~~~~~~~~~g~~~~~ 409 (600)
+.. ++ ++|..+|.. ..++.+....+++++++||+.+ ++ +...+
T Consensus 108 ~~~------~~-------~~~~~~~~~-----~~~e~~~~~~g~~~~ilrp~~~~~~--------~~~~~---------- 151 (289)
T 3e48_A 108 ADQ------HN-------NPFHMSPYF-----GYASRLLSTSGIDYTYVRMAMYMDP--------LKPYL---------- 151 (289)
T ss_dssp CCS------TT-------CCSTTHHHH-----HHHHHHHHHHCCEEEEEEECEESTT--------HHHHH----------
T ss_pred CCC------CC-------CCCccchhH-----HHHHHHHHHcCCCEEEEeccccccc--------cHHHH----------
Confidence 321 11 233344411 2333444467999999999874 22 00000
Q ss_pred eEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhh
Q psy16545 410 YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRT 489 (600)
Q Consensus 410 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 489 (600)
..+.. .+. .. ++.+++. ++
T Consensus 152 ------------------------------------------------~~~~~-~~~-~~-----~~~g~~~------~~ 170 (289)
T 3e48_A 152 ------------------------------------------------PELMN-MHK-LI-----YPAGDGR------IN 170 (289)
T ss_dssp ------------------------------------------------HHHHH-HTE-EC-----CCCTTCE------EE
T ss_pred ------------------------------------------------HHHHH-CCC-Ee-----cCCCCce------ee
Confidence 00000 010 00 1223333 77
Q ss_pred hhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCc-eeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCCC--
Q psy16545 490 FERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP-YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-- 566 (600)
Q Consensus 490 fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~-~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~-- 566 (600)
|++ ++|+++++..++..+.. +++||++ ++.+|+.|+++.+.+.+|.++.+...+..
T Consensus 171 ~i~--------------------~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~ 229 (289)
T 3e48_A 171 YIT--------------------RNDIARGVIAIIKNPDTWGKRYLLS-GYSYDMKELAAILSEASGTEIKYEPVSLETF 229 (289)
T ss_dssp EEC--------------------HHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEHHHHHHHHHHHHTSCCEECCCCHHHH
T ss_pred eEE--------------------HHHHHHHHHHHHcCCCcCCceEEeC-CCcCCHHHHHHHHHHHHCCceeEEeCCHHHH
Confidence 877 88999999988876544 8899999 99999999999999999987655444321
Q ss_pred -----C-CCcc-------------ccccChHHHHHHcCceee
Q psy16545 567 -----E-GDIV-------------SMYANTDLAQRELGWSAR 589 (600)
Q Consensus 567 -----~-~~~~-------------~~~~d~~k~~~~lG~~p~ 589 (600)
. .... ....+...+++.+|++|+
T Consensus 230 ~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~ 271 (289)
T 3e48_A 230 AEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQ 271 (289)
T ss_dssp HHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCC
T ss_pred HHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCC
Confidence 0 1110 112355677888898876
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.48 E-value=1.5e-13 Score=136.48 Aligned_cols=151 Identities=15% Similarity=-0.016 Sum_probs=115.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||++|.+|+++++.. ...+.+++..+|+ .+|++|.+++.+++++ +.+. .++|
T Consensus 15 lVTGas~gIG~aia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g~id 87 (271)
T 3tzq_B 15 IITGACGGIGLETSRVL--ARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDF-----TIDTFGRLD 87 (271)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHH-----HHHHHSCCC
T ss_pred EEECCCcHHHHHHHHHH--HHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHH-----HHHHcCCCC
Confidence 48999999999996533 2333444444443 5799999998886554 3332 2699
Q ss_pred EEEEcCcccCc------ccCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAV------GESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 69 ~Vih~A~~~~~------~~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
++|||||.... ....+++...+++|+.|+.++++++ ++.+.+++|++||...+.. . .+
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~-~~ 155 (271)
T 3tzq_B 88 IVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAA-----------Y-DM 155 (271)
T ss_dssp EEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSB-----------C-SS
T ss_pred EEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCC-----------C-CC
Confidence 99999998633 1123456679999999999999998 5666779999999876532 2 45
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.|+.||.+.+.+++.++.++ .++++++++||.|++|.
T Consensus 156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 196 (271)
T 3tzq_B 156 STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPR 196 (271)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcc
Confidence 6899999999999999999874 28999999999999985
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.5e-13 Score=134.84 Aligned_cols=151 Identities=12% Similarity=0.043 Sum_probs=111.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------cccccChHHhhhHHhhhhcccccccC-CCCEEEEcCc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------EGDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAA 75 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~ 75 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|++|.+++.+++++ +.+.. ++|+||||||
T Consensus 11 lVTGas~giG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~-----~~~~~g~id~lv~~Ag 83 (250)
T 2fwm_X 11 WVTGAGKGIGYATALAF--VEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQR-----LLAETERLDALVNAAG 83 (250)
T ss_dssp EEESTTSHHHHHHHHHH--HHTTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHH-----HHHHCSCCCEEEECCC
T ss_pred EEeCCCcHHHHHHHHHH--HHCCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHH-----HHHHcCCCCEEEECCC
Confidence 58999999999996633 2333444444443 5899999998885554 33322 6999999999
Q ss_pred ccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHH
Q psy16545 76 VKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKH 147 (600)
Q Consensus 76 ~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~ 147 (600)
...... ..+++...+++|+.++.++++++ ++.+.+++|++||...+. +. .+.+.|+.||.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~-~~~~~Y~~sK~ 151 (250)
T 2fwm_X 84 ILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT-----------PR-IGMSAYGASKA 151 (250)
T ss_dssp CCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------CC-TTCHHHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC-----------CC-CCCchHHHHHH
Confidence 864321 23456779999999999999988 455667999999987653 22 45689999999
Q ss_pred HHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 148 FIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 148 ~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+.+++.++.+. .+++++++|||.++++.
T Consensus 152 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 183 (250)
T 2fwm_X 152 ALKSLALSVGLELAGSGVRCNVVSPGSTDTDM 183 (250)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred HHHHHHHHHHHHhCccCCEEEEEECCcccCcc
Confidence 9999999998775 38999999999999985
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=1e-13 Score=135.75 Aligned_cols=116 Identities=17% Similarity=0.186 Sum_probs=86.5
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCcc-------------ccccChHHHHHHHHHHHHHHHHHHHHcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVG-------------ESMQEPLMYYKNNLIATINLLEVMKSHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~-------------~~~~~~~~~~~~Nv~gt~~ll~~~~~~~ 317 (600)
+.+++++.+|+.+.+.+.++++ ++|+|||+|+..... ..+.+....++.|+.++.+++++|++.+
T Consensus 47 ~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 124 (253)
T 1xq6_A 47 GGEADVFIGDITDADSINPAFQ--GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG 124 (253)
T ss_dssp TCCTTEEECCTTSHHHHHHHHT--TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT
T ss_pred CCCeeEEEecCCCHHHHHHHHc--CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC
Confidence 4567899999999999999998 799999999875321 1112223568999999999999999999
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCC-CcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNI-KNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~-~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~ 383 (600)
++|||++||.+++.. ..+..+. .+.|+.+| ...|.+++ ..+++++++||+.
T Consensus 125 ~~~iv~~SS~~~~~~--------~~~~~~~~~~~y~~sK---~~~e~~~~----~~~i~~~~vrpg~ 176 (253)
T 1xq6_A 125 VKHIVVVGSMGGTNP--------DHPLNKLGNGNILVWK---RKAEQYLA----DSGTPYTIIRAGG 176 (253)
T ss_dssp CSEEEEEEETTTTCT--------TCGGGGGGGCCHHHHH---HHHHHHHH----TSSSCEEEEEECE
T ss_pred CCEEEEEcCccCCCC--------CCccccccchhHHHHH---HHHHHHHH----hCCCceEEEecce
Confidence 999999999887632 2111110 12456688 66777765 3799999999876
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=2.1e-13 Score=129.18 Aligned_cols=135 Identities=14% Similarity=0.068 Sum_probs=101.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIH 72 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih 72 (600)
.|||++|++|+++.+... ..+.++++++|+ .+|+.|.+++.+ +++ ++|+|||
T Consensus 7 lVtGatG~iG~~l~~~l~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~---------~~~--~~d~vi~ 73 (206)
T 1hdo_A 7 AIFGATGQTGLTTLAQAV--QAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDK---------TVA--GQDAVIV 73 (206)
T ss_dssp EEESTTSHHHHHHHHHHH--HTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHH---------HHT--TCSEEEE
T ss_pred EEEcCCcHHHHHHHHHHH--HCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHH---------HHc--CCCEEEE
Confidence 489999999999965322 112222222222 689999988888 666 7999999
Q ss_pred cCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q psy16545 73 FAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEM 152 (600)
Q Consensus 73 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~ 152 (600)
+|+.... .+ ..++|+.++.+++++|++.++++||++||.++|+.... .+ .+.++|+.+|..+|++
T Consensus 74 ~a~~~~~----~~---~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~-------~~-~~~~~y~~~K~~~e~~ 138 (206)
T 1hdo_A 74 LLGTRND----LS---PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK-------VP-PRLQAVTDDHIRMHKV 138 (206)
T ss_dssp CCCCTTC----CS---CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTC-------SC-GGGHHHHHHHHHHHHH
T ss_pred CccCCCC----CC---ccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccc-------cc-ccchhHHHHHHHHHHH
Confidence 9997643 12 23589999999999999999999999999999875321 11 1568899999999998
Q ss_pred HHHHHhhcCCceEEEEecccccCC
Q psy16545 153 LKDLSKAHKEWNIISLRYFNPVGA 176 (600)
Q Consensus 153 ~~~~~~~~~~~~~~ilR~~~v~G~ 176 (600)
++. . +++++++||+.+ ++
T Consensus 139 ~~~----~-~i~~~~lrp~~~-~~ 156 (206)
T 1hdo_A 139 LRE----S-GLKYVAVMPPHI-GD 156 (206)
T ss_dssp HHH----T-CSEEEEECCSEE-EC
T ss_pred HHh----C-CCCEEEEeCCcc-cC
Confidence 853 3 899999999997 44
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.46 E-value=1.7e-13 Score=136.86 Aligned_cols=152 Identities=15% Similarity=0.021 Sum_probs=115.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------------------cccccChHHhhhHHh
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------------------EGDIVSMYANTDLAQ 54 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------------~~Dl~~~~~~~~~~~ 54 (600)
-|||++|.+|+++++. +...+.+++..+|+ .+|++|.+++.++++
T Consensus 14 lVTGas~gIG~a~a~~--l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 91 (281)
T 3s55_A 14 LITGGARGMGRSHAVA--LAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVA 91 (281)
T ss_dssp EEETTTSHHHHHHHHH--HHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred EEeCCCchHHHHHHHH--HHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 5899999999999653 33334445544442 579999999888655
Q ss_pred hhhccccccc-CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCC
Q psy16545 55 KELGWSARCT-HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQ 125 (600)
Q Consensus 55 ~~~~~~~~~~-~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~ 125 (600)
+ +.+. .++|++|||||..... ...+++...+++|+.|+.++++++ ++.+..++|++||...+..
T Consensus 92 ~-----~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-- 164 (281)
T 3s55_A 92 E-----AEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA-- 164 (281)
T ss_dssp H-----HHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC--
T ss_pred H-----HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC--
Confidence 4 3332 2699999999986532 223456778999999999999996 3445679999999866532
Q ss_pred CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCCC
Q psy16545 126 FLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAHP 178 (600)
Q Consensus 126 ~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~ 178 (600)
. .+.+.|+.||.+.+.+++.++.++ .|+++++++||.|++|..
T Consensus 165 ---------~-~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 209 (281)
T 3s55_A 165 ---------N-FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMT 209 (281)
T ss_dssp ---------C-TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTT
T ss_pred ---------C-CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccc
Confidence 2 456899999999999999999875 389999999999999963
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.2e-13 Score=134.26 Aligned_cols=109 Identities=16% Similarity=0.138 Sum_probs=87.4
Q ss_pred Cce-eEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 252 KKV-DFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v-~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
.++ +++.+|++ +.+.+.+. ++|+|||+|+... ..++...++.|+.++.+++++|++.+++|||++||...+
T Consensus 64 ~~~~~~~~~Dl~--~~~~~~~~--~~D~vi~~ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~ 135 (236)
T 3e8x_A 64 RGASDIVVANLE--EDFSHAFA--SIDAVVFAAGSGP----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTV 135 (236)
T ss_dssp TTCSEEEECCTT--SCCGGGGT--TCSEEEECCCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCS
T ss_pred CCCceEEEcccH--HHHHHHHc--CCCEEEECCCCCC----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCC
Confidence 468 99999998 66777777 8999999999753 256788999999999999999999999999999995544
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeeccc
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL 384 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~ 384 (600)
.. |..+ +..+.|+.+| ..+|.+++ ..+++++++||+.+
T Consensus 136 ~~-------~~~~--~~~~~Y~~sK---~~~e~~~~----~~gi~~~~lrpg~v 173 (236)
T 3e8x_A 136 DP-------DQGP--MNMRHYLVAK---RLADDELK----RSSLDYTIVRPGPL 173 (236)
T ss_dssp CG-------GGSC--GGGHHHHHHH---HHHHHHHH----HSSSEEEEEEECSE
T ss_pred CC-------CCCh--hhhhhHHHHH---HHHHHHHH----HCCCCEEEEeCCcc
Confidence 22 2222 2247899999 66787776 67999999999873
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.45 E-value=2.1e-13 Score=134.97 Aligned_cols=151 Identities=17% Similarity=0.128 Sum_probs=117.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------cccccChHHhhhHHhhhhccccccc-CCCCEEEEcCcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFAAV 76 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~ 76 (600)
-|||++|.+|+++++ ++...+.+++..+|+ .+|+++.+++.+++++ +.+. .++|+||||||.
T Consensus 32 lVTGas~gIG~aia~--~la~~G~~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~-----~~~~~g~iD~lvnnAg~ 104 (266)
T 3uxy_A 32 LVTGAAGGIGGAVVT--ALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGA-----VAAGLGRLDIVVNNAGV 104 (266)
T ss_dssp EESSTTSHHHHHHHH--HHHHTTCEEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHH-----HHHHHSCCCEEEECCCC
T ss_pred EEeCCCcHHHHHHHH--HHHHCCCEEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHH-----HHHhcCCCCEEEECCCC
Confidence 589999999999966 444456677777776 5799999888775543 3322 269999999998
Q ss_pred cCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q psy16545 77 KAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHF 148 (600)
Q Consensus 77 ~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~ 148 (600)
..... ..+++...+++|+.|+.++++++ ++.+.+++|++||...+. +. .+.+.|+.||.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~-~~~~~Y~asKaa 172 (266)
T 3uxy_A 105 ISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR-----------PG-PGHALYCLTKAA 172 (266)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB-----------CC-TTBHHHHHHHHH
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------CC-CCChHHHHHHHH
Confidence 75422 23456678999999999999998 555667999999986553 22 456889999999
Q ss_pred HHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 149 IEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 149 ~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+++.++.++ .++++++++||.|.++.
T Consensus 173 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 203 (266)
T 3uxy_A 173 LASLTQCMGMDHAPQGIRINAVCPNEVNTPM 203 (266)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESSBCCHH
T ss_pred HHHHHHHHHHHhhhcCcEEEEEeeCCCcchH
Confidence 999999998775 38999999999999873
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.45 E-value=4.8e-13 Score=131.47 Aligned_cols=153 Identities=18% Similarity=0.091 Sum_probs=114.9
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCCE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDIDC 69 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~ 69 (600)
|||+++.+|+.+++.....+.++.++..+|+ .+|++|.+++.+++++ +.+. .++|+
T Consensus 7 VTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g~id~ 81 (254)
T 3kzv_A 7 VTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNA-----AVKGHGKIDS 81 (254)
T ss_dssp ECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHH-----HHHHHSCCCE
T ss_pred EECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHH-----HHHhcCCccE
Confidence 8999999999986543222222333333332 6899999998886554 3332 26999
Q ss_pred EEEcCcccCcc-----cCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 70 VIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 70 Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+|||||..... ...+++...+++|+.|+.++++++ ++.+ .++|++||...+. +. .+.+
T Consensus 82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~-----------~~-~~~~ 148 (254)
T 3kzv_A 82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNM-----------YF-SSWG 148 (254)
T ss_dssp EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCC-----------SS-CCSH
T ss_pred EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhcc-----------CC-CCcc
Confidence 99999985431 123456679999999999999998 4445 6999999986543 22 4668
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPS 179 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~ 179 (600)
.|+.||.+.+.+++.++.++.+++++.++||.+.++...
T Consensus 149 ~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~ 187 (254)
T 3kzv_A 149 AYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQV 187 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSC
T ss_pred hHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHH
Confidence 999999999999999998877999999999999998643
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.45 E-value=2.4e-13 Score=134.57 Aligned_cols=151 Identities=15% Similarity=0.098 Sum_probs=102.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc--
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-- 64 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|+++.+++.+++++ +.+.
T Consensus 18 lITGasggiG~~la~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 90 (266)
T 1xq1_A 18 LVTGGTKGIGHAIVEEFA--GFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQT-----VSSMFG 90 (266)
T ss_dssp EETTTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH-----HHHHHT
T ss_pred EEECCCCHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHH-----HHHHhC
Confidence 589999999999955322 222233322222 6899999888885543 2221
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+||||||...... ..+++...+++|+.++.++++++ ++.+.+++|++||...+.. .
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~- 158 (266)
T 1xq1_A 91 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS-----------A- 158 (266)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC-----------C-
Confidence 36999999999764321 23456678999999999999998 4556789999999866532 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .+++++++|||.++++.
T Consensus 159 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 201 (266)
T 1xq1_A 159 SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPL 201 (266)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccch
Confidence 456899999999999999988774 38999999999999985
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.3e-13 Score=138.15 Aligned_cols=165 Identities=13% Similarity=0.114 Sum_probs=111.8
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEEEc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHF 73 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~ 73 (600)
|||++|++|+.+.+..... .+.++++++|+ .+|+.|++++.+ +++ ++|+|||+
T Consensus 5 VtGatG~iG~~l~~~L~~~-~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~---------~~~--~~d~vi~~ 72 (289)
T 3e48_A 5 LTGATGHLGTHITNQAIAN-HIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVE---------AFK--GMDTVVFI 72 (289)
T ss_dssp EETTTSHHHHHHHHHHHHT-TCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHH---------HTT--TCSEEEEC
T ss_pred EEcCCchHHHHHHHHHhhC-CCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHH---------HHh--CCCEEEEe
Confidence 8999999999996643221 12333333332 689999999988 776 89999999
Q ss_pred CcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q psy16545 74 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEML 153 (600)
Q Consensus 74 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~ 153 (600)
|+.... ...|+.++.+++++|++.++++||++||.+ .. +..+. + +...+..+|..+
T Consensus 73 a~~~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~---~~------~~~~~--~---~~~~~~~~e~~~ 128 (289)
T 3e48_A 73 PSIIHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYA---DQ------HNNPF--H---MSPYFGYASRLL 128 (289)
T ss_dssp CCCCCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESC---CS------TTCCS--T---THHHHHHHHHHH
T ss_pred CCCCcc----------chhhHHHHHHHHHHHHHcCCCEEEEEcccC---CC------CCCCC--c---cchhHHHHHHHH
Confidence 987532 234899999999999999999999999943 11 11111 1 122223344444
Q ss_pred HHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 154 KDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 154 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
+ +. +++++++||+.+||+. ...+.....+ ...+++.|.+.+++++++|+++.+..+
T Consensus 129 ~----~~-g~~~~ilrp~~~~~~~----------------~~~~~~~~~~---~~~~~~~g~~~~~~i~~~Dva~~~~~~ 184 (289)
T 3e48_A 129 S----TS-GIDYTYVRMAMYMDPL----------------KPYLPELMNM---HKLIYPAGDGRINYITRNDIARGVIAI 184 (289)
T ss_dssp H----HH-CCEEEEEEECEESTTH----------------HHHHHHHHHH---TEECCCCTTCEEEEECHHHHHHHHHHH
T ss_pred H----Hc-CCCEEEEecccccccc----------------HHHHHHHHHC---CCEecCCCCceeeeEEHHHHHHHHHHH
Confidence 3 23 8999999999999972 2233333221 123467788999999999988766544
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.44 E-value=3.5e-13 Score=132.85 Aligned_cols=153 Identities=10% Similarity=-0.010 Sum_probs=110.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|++|+++.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+. .
T Consensus 17 lItGasggiG~~la~~l~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 89 (260)
T 3awd_A 17 IVTGGAQNIGLACVTALA--EAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRS-----VHEQEG 89 (260)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHHS
T ss_pred EEeCCCchHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH-----HHHHcC
Confidence 589999999999955322 122233332221 6899999988885543 3222 2
Q ss_pred CCCEEEEcCcccC-ccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKA-VGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~-~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|+||||||... ... ..+++...+++|+.++.++++++.+ .+.+++|++||...+.. .+.
T Consensus 90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------~~~- 159 (260)
T 3awd_A 90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIV---------NRP- 159 (260)
T ss_dssp CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------CSS-
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhccc---------CCC-
Confidence 6999999999764 211 2234567899999999999998754 35679999999765432 122
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.|.+++.++.+. .+++++++|||.++++.
T Consensus 160 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~ 202 (260)
T 3awd_A 160 QQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTL 202 (260)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccch
Confidence 345899999999999999998773 28999999999999985
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=4.2e-13 Score=130.92 Aligned_cols=147 Identities=17% Similarity=0.096 Sum_probs=111.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------cccccChHHhhhHHhhhhcccccccC-CCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------EGDIVSMYANTDLAQKELGWSARCTH-DIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~ 69 (600)
-|||++|++|+++.+... ..+.+++.++|+ .+|++|.+++.+ +++.. ++|+
T Consensus 11 lITGasggiG~~~a~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---------~~~~~~~id~ 79 (244)
T 3d3w_A 11 LVTGAGKGIGRGTVQALH--ATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATER---------ALGSVGPVDL 79 (244)
T ss_dssp EEESTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHH---------HHTTCCCCCE
T ss_pred EEECCCcHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHH---------HHHHcCCCCE
Confidence 489999999999965332 223344444432 579999998888 44432 5999
Q ss_pred EEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc----C-CCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 70 VIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G-VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 70 Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
||||||...... ..+++...+++|+.++.++++++.+. + .+++|++||...+.. . .+.+
T Consensus 80 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~-~~~~ 147 (244)
T 3d3w_A 80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----------V-TNHS 147 (244)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------C-TTBH
T ss_pred EEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC-----------C-CCCc
Confidence 999999764321 22446679999999999999887553 4 579999999876542 2 4568
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.|+.||.+.|.+++.++.++ .+++++++|||.++++.
T Consensus 148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~ 186 (244)
T 3d3w_A 148 VYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM 186 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTT
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccc
Confidence 99999999999999998774 38999999999999985
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.9e-13 Score=132.61 Aligned_cols=151 Identities=11% Similarity=0.026 Sum_probs=109.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------------cccccChHHhhhHHhhhhccccccc-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------------EGDIVSMYANTDLAQKELGWSARCT-HDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~ 67 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+. .++
T Consensus 11 lVTGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g~i 83 (249)
T 2ew8_A 11 VITGGANGIGRAIAERFA--VEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQ-----VISTFGRC 83 (249)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHHSCC
T ss_pred EEeCCCcHHHHHHHHHHH--HCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH-----HHHHcCCC
Confidence 489999999999965322 222333333332 5799999988885554 3322 269
Q ss_pred CEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHH----HHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEV----MKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 68 d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a----~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
|+||||||...... ..+++...+++|+.++.+++++ +++.+.+++|++||...+.. . .+.
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~ 151 (249)
T 2ew8_A 84 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK-----------I-EAY 151 (249)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-----------C-SSC
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC-----------C-CCc
Confidence 99999999864321 2345667899999999998888 45556689999999876642 2 456
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.|+.||.+.+.+++.++.++ .++++++++||.+.++.
T Consensus 152 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 191 (249)
T 2ew8_A 152 THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTAT 191 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCcc
Confidence 899999999999999998775 38999999999999884
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=3.2e-13 Score=133.25 Aligned_cols=151 Identities=13% Similarity=0.020 Sum_probs=111.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d 68 (600)
-|||++|.+|+++.+.. ...+.+++.++|+ .+|++|.+++.+++++ +.+.. ++|
T Consensus 11 lVTGas~gIG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~~g~iD 83 (260)
T 1nff_A 11 LVSGGARGMGASHVRAM--VAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDT-----AVTAFGGLH 83 (260)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHH-----HHHHHSCCC
T ss_pred EEeCCCCHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHH-----HHHHcCCCC
Confidence 58999999999996532 2233344433332 5799999988885554 33222 699
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+||||||...... ..+++...+++|+.|+.++++++ ++.+.+++|++||...+.. . .+.+
T Consensus 84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~~ 151 (260)
T 1nff_A 84 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG-----------T-VACH 151 (260)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------C-TTBH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCC-----------C-CCch
Confidence 9999999864321 23456679999999998776665 4556789999999876542 1 3557
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.|+.||.+.+.+++.++.++ .+++++++|||.++++.
T Consensus 152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 190 (260)
T 1nff_A 152 GYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM 190 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGG
T ss_pred hHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCc
Confidence 89999999999999998774 38999999999999985
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.44 E-value=3e-13 Score=133.37 Aligned_cols=151 Identities=12% Similarity=0.063 Sum_probs=113.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d 68 (600)
-|||++|.+|+++++.. ...+.+++..+|+ .+|++|++++.+++++ +.+.. ++|
T Consensus 12 lVTGas~gIG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~~g~id 84 (259)
T 4e6p_A 12 LITGSARGIGRAFAEAY--VREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAA-----TVEHAGGLD 84 (259)
T ss_dssp EEETCSSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHH-----HHHHSSSCC
T ss_pred EEECCCcHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHH-----HHHHcCCCC
Confidence 58999999999996532 2233344433432 6899999998886554 33333 699
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc----C-CCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G-VYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
+||||||...... ..+++...+++|+.|+.++++++.+. + ..++|++||...+.. . .+.
T Consensus 85 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~ 152 (259)
T 4e6p_A 85 ILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG-----------E-ALV 152 (259)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------C-TTB
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC-----------C-CCC
Confidence 9999999864322 23456678999999999999987543 2 358999999866532 2 456
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.|+.||.+.+.+++.++.++ .++++++++||.|++|.
T Consensus 153 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 192 (259)
T 4e6p_A 153 AIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEH 192 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTT
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccch
Confidence 889999999999999998775 38999999999999985
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.44 E-value=3.4e-13 Score=135.36 Aligned_cols=159 Identities=13% Similarity=0.045 Sum_probs=119.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccCCCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTHDIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~ 69 (600)
-|||++|.+|+++++.. ...+.+++..+|+ .+|++|.+++.+++++ + .++|+
T Consensus 20 lVTGas~gIG~~~a~~L--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~---~~iD~ 89 (291)
T 3rd5_A 20 VITGANSGLGAVTAREL--ARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADG-----V---SGADV 89 (291)
T ss_dssp EEECCSSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHT-----C---CCEEE
T ss_pred EEeCCCChHHHHHHHHH--HHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHh-----c---CCCCE
Confidence 58999999999996533 2233344444443 5899999999995543 2 27999
Q ss_pred EEEcCcccCcc--cCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCC-CCCCC-CCCCCCCCCCChHHHH
Q psy16545 70 VIHFAAVKAVG--ESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP-QFLPI-TEDHPTGNIKNVYGKT 145 (600)
Q Consensus 70 Vih~A~~~~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~-~~~~~-~E~~~~~~p~s~Y~~s 145 (600)
||||||..... ...++++..+++|+.|+.++++++.....+|+|++||...+... ..... .+..+. .+.+.|+.|
T Consensus 90 lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~s 168 (291)
T 3rd5_A 90 LINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRY-SPWLAYSQS 168 (291)
T ss_dssp EEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCC-CHHHHHHHH
T ss_pred EEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCC-CCcchHHHH
Confidence 99999987532 24567788999999999999999998877799999998776432 11112 222344 566789999
Q ss_pred HHHHHHHHHHHHhhc--CC--ceEEEEecccccCCC
Q psy16545 146 KHFIEEMLKDLSKAH--KE--WNIISLRYFNPVGAH 177 (600)
Q Consensus 146 K~~~e~~~~~~~~~~--~~--~~~~ilR~~~v~G~~ 177 (600)
|++.+.+++.++.++ .+ ++++.++||.|..+.
T Consensus 169 K~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~ 204 (291)
T 3rd5_A 169 KLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNL 204 (291)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccc
Confidence 999999999998775 24 999999999998874
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=3.1e-13 Score=133.57 Aligned_cols=151 Identities=12% Similarity=0.097 Sum_probs=111.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+.
T Consensus 11 lVTGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 83 (263)
T 3ai3_A 11 VITGSSSGIGLAIAEGFA--KEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVES-----VRSSF 83 (263)
T ss_dssp EEESCSSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHH-----HHHHH
T ss_pred EEECCCchHHHHHHHHHH--HCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH-----HHHHc
Confidence 589999999999855322 222233322221 5799999988885554 3322
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+||||||...... ..+++...+++|+.++.++++++. +.+.+++|++||...+.. .
T Consensus 84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~- 151 (263)
T 3ai3_A 84 GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQP-----------L- 151 (263)
T ss_dssp SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------C-
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC-----------C-
Confidence 26999999999864321 234566789999999999998874 346679999999877652 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.+. .+++++++|||.+++|.
T Consensus 152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 194 (263)
T 3ai3_A 152 WYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPD 194 (263)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 456789999999999999998774 38999999999999984
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.5e-13 Score=135.19 Aligned_cols=156 Identities=11% Similarity=-0.042 Sum_probs=110.6
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccccc--------ccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARRE--------GDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVG 80 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~--------~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~ 80 (600)
|||++|.+|+.+.+.. ...+.+++.++|+. +|+++.+++.+++++ . ..++|+||||||....
T Consensus 6 VTGas~gIG~~~a~~l--~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~-----~--~~~id~lv~~Ag~~~~- 75 (257)
T 1fjh_A 6 ISGCATGIGAATRKVL--EAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAK-----C--SKGMDGLVLCAGLGPQ- 75 (257)
T ss_dssp EETTTSHHHHHHHHHH--HHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTT-----C--TTCCSEEEECCCCCTT-
T ss_pred EeCCCCHHHHHHHHHH--HHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHH-----h--CCCCCEEEECCCCCCC-
Confidence 7999999999996643 33455666666653 788888888884332 1 1268999999998641
Q ss_pred cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCC-----------------CCCCCCC
Q psy16545 81 ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITED-----------------HPTGNIK 139 (600)
Q Consensus 81 ~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~-----------------~~~~~p~ 139 (600)
...++..+++|+.++.++++++. +.+.+++|++||...+......+..+. .+. .+.
T Consensus 76 --~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 152 (257)
T 1fjh_A 76 --TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ-GGN 152 (257)
T ss_dssp --CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTT-HHH
T ss_pred --cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCC-CCc
Confidence 23478899999999999999985 345679999999987732111110000 222 356
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.|+.||.+.+.+++.++.++ .++++++++||.+.++.
T Consensus 153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 192 (257)
T 1fjh_A 153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL 192 (257)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcc
Confidence 789999999999999988774 38999999999999885
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2.3e-13 Score=133.15 Aligned_cols=151 Identities=12% Similarity=0.005 Sum_probs=112.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+++++.. ...+.+++..+++ .+|++|.+++.+++++ +.+.
T Consensus 8 lVTGas~gIG~~ia~~l--~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~ 80 (246)
T 3osu_A 8 LVTGASRGIGRSIALQL--AEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKE-----VVSQF 80 (246)
T ss_dssp EETTCSSHHHHHHHHHH--HHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEECCCChHHHHHHHHH--HHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-----HHHHc
Confidence 48999999999996532 2223333322221 6899999998885554 3332
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|++|||||...... ..+++...+++|+.|+.++++++ ++.+.+++|++||...+.. .
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~- 148 (246)
T 3osu_A 81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVG-----------N- 148 (246)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------C-
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC-----------C-
Confidence 26999999999864322 23456679999999999999998 5556679999999765431 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
++.+.|+.||.+.+.+++.++.++ .++++++++||.+.++.
T Consensus 149 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 191 (246)
T 3osu_A 149 PGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDM 191 (246)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGC
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCc
Confidence 456899999999999999998764 38999999999999985
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=4.6e-14 Score=145.62 Aligned_cols=171 Identities=9% Similarity=-0.050 Sum_probs=117.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------ccc-ccChHHhhhHHhhhhcccccccCCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGD-IVSMYANTDLAQKELGWSARCTHDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~D-l~~~~~~~~~~~~~~~~~~~~~~~~d 68 (600)
.|||++|++|+++.+.... .+.++++++|+ .+| ++|.+++.+ +++ ++|
T Consensus 9 lVtGatG~iG~~l~~~L~~--~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~---------~~~--~~d 75 (352)
T 1xgk_A 9 AVVGATGRQGASLIRVAAA--VGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDT---------LFE--GAH 75 (352)
T ss_dssp EEESTTSHHHHHHHHHHHH--TTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHH---------HHT--TCS
T ss_pred EEECCCCHHHHHHHHHHHh--CCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHH---------HHh--cCC
Confidence 5899999999999653321 22233333332 579 999988888 776 799
Q ss_pred EEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcC-CCeEEEecCcc--ccCCCCCCCCCCCCCCCCCCChHHHH
Q psy16545 69 CVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCT--VYGEPQFLPITEDHPTGNIKNVYGKT 145 (600)
Q Consensus 69 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~r~I~~SS~~--vyg~~~~~~~~E~~~~~~p~s~Y~~s 145 (600)
+|||+++... .+.|..+ .+++++|++.+ +++||++||.. .|+. .+.++|+.|
T Consensus 76 ~Vi~~a~~~~-----------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-------------~~~~~y~~s 130 (352)
T 1xgk_A 76 LAFINTTSQA-----------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP-------------WPAVPMWAP 130 (352)
T ss_dssp EEEECCCSTT-----------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS-------------CCCCTTTHH
T ss_pred EEEEcCCCCC-----------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC-------------CCCccHHHH
Confidence 9999987431 1346666 99999999998 99999999975 3331 234789999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCe-EEEecCCcccccCcce-
Q psy16545 146 KHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPH-FTVFGADYETEDGTGK- 223 (600)
Q Consensus 146 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~g~g~~~~~~~~v- 223 (600)
|..+|++++.. +++++++||+ +||+..... +.+.+.......+.. +.+.+++.+.++++++
T Consensus 131 K~~~E~~~~~~-----gi~~~ivrpg-~~g~~~~~~-----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~ 193 (352)
T 1xgk_A 131 KFTVENYVRQL-----GLPSTFVYAG-IYNNNFTSL-----------PYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAE 193 (352)
T ss_dssp HHHHHHHHHTS-----SSCEEEEEEC-EEGGGCBSS-----------SCSSCBEEECTTSCEEEEESSCTTSCEEEECHH
T ss_pred HHHHHHHHHHc-----CCCEEEEecc-eecCCchhc-----------ccccccccccCCCceEEeeccCCCCceeeEecH
Confidence 99999998752 8999999976 789853211 111111111112222 3457778889999999
Q ss_pred EEeeeccccc
Q psy16545 224 VVAIDNFVNS 233 (600)
Q Consensus 224 ~d~v~~~~~a 233 (600)
+|+++.+..+
T Consensus 194 ~Dva~ai~~~ 203 (352)
T 1xgk_A 194 HDVGPALLQI 203 (352)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7988876654
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=7e-13 Score=129.36 Aligned_cols=152 Identities=15% Similarity=0.118 Sum_probs=110.8
Q ss_pred CCCCcchHHHHHHHhhhccCCC-----ccEEecccc---------------------cccccChHHhhhHHhhhhccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKP-----VPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~-----~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
|||++|.+|+.+.+.....+.. ..++.++|+ .+|+++.+++.+++++ +.
T Consensus 7 ITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~ 81 (244)
T 2bd0_A 7 ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTH-----IV 81 (244)
T ss_dssp EETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH-----HH
T ss_pred EECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHH-----HH
Confidence 7999999999886532211110 022222221 6899999988885554 33
Q ss_pred ccC-CCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCC
Q psy16545 63 CTH-DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 63 ~~~-~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
+.. ++|+||||||..... ...+++...+++|+.++.++++++. +.+.+++|++||...+..
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------- 151 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA---------- 151 (244)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------
T ss_pred HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCC----------
Confidence 222 699999999986432 1234566789999999999999874 346679999999877642
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.+. .+++++++|||.++++.
T Consensus 152 -~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 195 (244)
T 2bd0_A 152 -F-RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM 195 (244)
T ss_dssp -C-TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT
T ss_pred -C-CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchh
Confidence 2 456899999999999998887654 38999999999999985
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.43 E-value=4.4e-13 Score=136.45 Aligned_cols=152 Identities=16% Similarity=0.081 Sum_probs=110.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------------cccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------------EGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------------~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
-|||++|.+|+.+++... ..+.+++..+|+ .+|++|.+++.+++++ +
T Consensus 9 lVTGas~GIG~aia~~L~--~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~-----~ 81 (324)
T 3u9l_A 9 LITGASSGFGRLTAEALA--GAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ-----I 81 (324)
T ss_dssp EESSCSSHHHHHHHHHHH--HTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH-----H
T ss_pred EEECCCcHHHHHHHHHHH--HCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH-----H
Confidence 489999999999965322 222333321111 6899999998886554 3
Q ss_pred ccc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCC
Q psy16545 62 RCT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITED 132 (600)
Q Consensus 62 ~~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~ 132 (600)
.+. .++|+||||||...... ..+++...+++|+.|+.++++++ ++.+.+++|++||...+..
T Consensus 82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~--------- 152 (324)
T 3u9l_A 82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGG--------- 152 (324)
T ss_dssp HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccC---------
Confidence 332 26999999999764322 23456678999999999999998 5667789999999876632
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+. ...+.|+.||.+.+.+++.++.+. .|+++++++||.+.++.
T Consensus 153 -~~-~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~ 197 (324)
T 3u9l_A 153 -TP-PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT 197 (324)
T ss_dssp -CC-SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred -CC-CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence 11 345789999999999999998874 38999999999998875
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=4.7e-13 Score=132.04 Aligned_cols=150 Identities=14% Similarity=0.077 Sum_probs=111.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||++|.+|+++++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+..
T Consensus 13 lVTGas~giG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 85 (260)
T 2ae2_A 13 LVTGGSRGIGYGIVEEL--ASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNT-----VANHFH 85 (260)
T ss_dssp EEESCSSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH-----HHHHTT
T ss_pred EEECCCcHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH-----HHHHcC
Confidence 58999999999995532 2223333333332 5899999988885554 33332
Q ss_pred -CCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 -~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|+||||||..... ...+++...+++|+.|+.++++++. +.+.+++|++||...+.. .
T Consensus 86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~- 153 (260)
T 2ae2_A 86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA-----------V- 153 (260)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC-----------C-
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----------C-
Confidence 699999999976432 1234566789999999999999884 456679999999865532 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+.+.|+.||.+.+.+++.++.++ .++++++++||.+.++
T Consensus 154 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 195 (260)
T 2ae2_A 154 PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATS 195 (260)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCc
Confidence 456889999999999999998775 2899999999999887
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.42 E-value=4.1e-13 Score=131.52 Aligned_cols=151 Identities=10% Similarity=-0.050 Sum_probs=110.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|++|++++.+++++ +.+.
T Consensus 6 lItGasggiG~~~a~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 78 (250)
T 2cfc_A 6 IVTGASSGNGLAIATRFL--ARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAA-----TMEQF 78 (250)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEeCCCchHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-----HHHHh
Confidence 379999999999855322 222233333321 6899999988885543 2222
Q ss_pred CCCCEEEEcCcccCccc-------CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE-------SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~-------~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
.++|+||||||...... ..+++...+++|+.++.++++++. +.+.+++|++||...+..
T Consensus 79 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------- 148 (250)
T 2cfc_A 79 GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVA---------- 148 (250)
T ss_dssp SCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------
T ss_pred CCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC----------
Confidence 26999999999864321 224566789999999988877764 446789999999876542
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.++ .+++++++|||.++++.
T Consensus 149 -~-~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 192 (250)
T 2cfc_A 149 -F-PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPM 192 (250)
T ss_dssp -C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred -C-CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCc
Confidence 2 456899999999999999988764 28999999999999985
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.42 E-value=3.9e-13 Score=134.90 Aligned_cols=152 Identities=15% Similarity=0.044 Sum_probs=112.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+.+++... ..+.+++.++|+ .+|++|.+++.+++++ +.+.
T Consensus 45 lVTGas~GIG~aia~~la--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~ 117 (293)
T 3rih_A 45 LVTGGTKGIGRGIATVFA--RAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAART-----VVDAF 117 (293)
T ss_dssp EETTTTSHHHHHHHHHHH--HTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEeCCCcHHHHHHHHHHH--HCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHH-----HHHHc
Confidence 589999999999855322 222223322222 6899999998886554 3332
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+||||||...... ..+++...+++|+.|+.++++++ ++.+..++|++||...+.. +.
T Consensus 118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~----------~~- 186 (293)
T 3rih_A 118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT----------GY- 186 (293)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTB----------BC-
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccC----------CC-
Confidence 26999999999864322 23456779999999999999997 4556679999999754210 12
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .|+++++++||.|+++.
T Consensus 187 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 229 (293)
T 3rih_A 187 PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEG 229 (293)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcc
Confidence 456899999999999999998875 38999999999999984
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.42 E-value=4.9e-13 Score=128.70 Aligned_cols=148 Identities=11% Similarity=-0.021 Sum_probs=118.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccccc-ccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcc-----c
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE-GDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVG-----E 81 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~-----~ 81 (600)
-|||+++.+|+++++ ++...+.+++..+|+. +|++|++++.+++++ + .++|++|||||..... .
T Consensus 10 lVTGas~gIG~~~a~--~l~~~G~~V~~~~r~~~~D~~~~~~v~~~~~~------~--g~id~lv~nAg~~~~~~~~~~~ 79 (223)
T 3uce_A 10 VVLGGTSGIGAELAK--QLESEHTIVHVASRQTGLDISDEKSVYHYFET------I--GAFDHLIVTAGSYAPAGKVVDV 79 (223)
T ss_dssp EEETTTSHHHHHHHH--HHCSTTEEEEEESGGGTCCTTCHHHHHHHHHH------H--CSEEEEEECCCCCCCCSCTTTS
T ss_pred EEECCCCHHHHHHHH--HHHHCCCEEEEecCCcccCCCCHHHHHHHHHH------h--CCCCEEEECCCCCCCCCCcccC
Confidence 489999999999966 5666778888888875 899999999985443 1 2699999999976322 1
Q ss_pred CCCChhhhHHhHHHHHHHHHHHHHHcC--CCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy16545 82 SMQEPLMYYKNNLIATINLLEVMKSHG--VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKA 159 (600)
Q Consensus 82 ~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~ 159 (600)
..+++...+++|+.++.++++++.+.- -.++|++||...+.. . .+.+.|+.||.+.+.+++.++.+
T Consensus 80 ~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~-~~~~~Y~asK~a~~~~~~~la~e 147 (223)
T 3uce_A 80 EVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV-----------V-ANTYVKAAINAAIEATTKVLAKE 147 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC-----------C-TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC-----------C-CCchHHHHHHHHHHHHHHHHHHh
Confidence 234566789999999999999997652 248999999876542 2 46689999999999999999998
Q ss_pred cCCceEEEEecccccCCC
Q psy16545 160 HKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 160 ~~~~~~~ilR~~~v~G~~ 177 (600)
+..++++.++||.+.++.
T Consensus 148 ~~~i~vn~v~PG~v~t~~ 165 (223)
T 3uce_A 148 LAPIRVNAISPGLTKTEA 165 (223)
T ss_dssp HTTSEEEEEEECSBCSGG
T ss_pred hcCcEEEEEEeCCCcchh
Confidence 745999999999999885
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.42 E-value=1.1e-13 Score=138.60 Aligned_cols=162 Identities=13% Similarity=0.033 Sum_probs=118.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------------------cccccChHHhhhHHh
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------------------EGDIVSMYANTDLAQ 54 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------------~~Dl~~~~~~~~~~~ 54 (600)
-|||+++.+|+.+++. +...+.+++.+|++ .+|++|.+++.++++
T Consensus 14 lVTGas~gIG~~ia~~--l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 91 (287)
T 3pxx_A 14 LVTGGARGQGRSHAVK--LAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELA 91 (287)
T ss_dssp EEETTTSHHHHHHHHH--HHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHH
T ss_pred EEeCCCChHHHHHHHH--HHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence 4899999999999653 33334444444432 579999999888655
Q ss_pred hhhccccccc-CCCCEEEEcCcccCcc--cCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCC
Q psy16545 55 KELGWSARCT-HDIDCVIHFAAVKAVG--ESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPI 129 (600)
Q Consensus 55 ~~~~~~~~~~-~~~d~Vih~A~~~~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~ 129 (600)
+ +.+. .++|+||||||..... ...+++...+++|+.|+.++++++... +..++|++||...+......+.
T Consensus 92 ~-----~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 166 (287)
T 3pxx_A 92 N-----AVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPG 166 (287)
T ss_dssp H-----HHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-
T ss_pred H-----HHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccccc
Confidence 4 3332 2699999999987543 234567789999999999999999775 2358999999876543222334
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 130 TEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 130 ~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.|..+. .+.+.|+.||.+.+.+++.++.++ .++++++++||.|.++.
T Consensus 167 ~~~~~~-~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 215 (287)
T 3pxx_A 167 AGGPQG-PGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDM 215 (287)
T ss_dssp ----CH-HHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTT
T ss_pred ccccCC-CccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccc
Confidence 444444 456789999999999999998875 28999999999999985
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.42 E-value=6.4e-13 Score=130.64 Aligned_cols=151 Identities=12% Similarity=0.021 Sum_probs=111.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------------cccccChHHhhhHHhhhhcccccccC-CC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------------EGDIVSMYANTDLAQKELGWSARCTH-DI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~ 67 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+.. ++
T Consensus 8 lVTGas~giG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~~g~i 80 (255)
T 2q2v_A 8 LVTGSTSGIGLGIAQVLA--RAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFAL-----AEREFGGV 80 (255)
T ss_dssp EESSCSSHHHHHHHHHHH--HTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHH-----HHHHHSSC
T ss_pred EEeCCCcHHHHHHHHHHH--HCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHH-----HHHHcCCC
Confidence 489999999999965332 223333333332 5799999998885554 33222 69
Q ss_pred CEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 68 d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
|+||||||...... ..+++...+++|+.++.++++++ ++.+.+++|++||...+.. . .+.
T Consensus 81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~ 148 (255)
T 2q2v_A 81 DILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVG-----------S-TGK 148 (255)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------C-TTB
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccC-----------C-CCc
Confidence 99999999764321 23456679999999888877765 5566789999999876542 1 356
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.|+.||.+.+.+++.++.++ .++++++++||.+++|.
T Consensus 149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (255)
T 2q2v_A 149 AAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPL 188 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcc
Confidence 789999999999999998875 38999999999999883
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.42 E-value=4.9e-13 Score=132.54 Aligned_cols=150 Identities=10% Similarity=0.023 Sum_probs=114.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------cccccChHHhhhHHhhhhccccccc-CCCCEEEEcCc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFAA 75 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A~ 75 (600)
-|||+++.+|+++++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .++|+||||||
T Consensus 18 lVTGas~GIG~aia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g~iD~lv~nAg 90 (269)
T 3vtz_A 18 IVTGGSSGIGLAVVDAL--VRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEK-----TTKKYGRIDILVNNAG 90 (269)
T ss_dssp EESSTTSHHHHHHHHHH--HHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHH-----HHHHHSCCCEEEECCC
T ss_pred EEeCCCCHHHHHHHHHH--HHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHH-----HHHHcCCCCEEEECCC
Confidence 48999999999996633 3334444444443 5899999998886554 3332 26999999999
Q ss_pred ccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHH
Q psy16545 76 VKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKH 147 (600)
Q Consensus 76 ~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~ 147 (600)
...... ..+++...+++|+.|+.++++++.. .+.+++|++||...+.. . .+.+.|+.||.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~~~Y~asKa 158 (269)
T 3vtz_A 91 IEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAA-----------T-KNAAAYVTSKH 158 (269)
T ss_dssp CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-----------C-TTCHHHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC-----------C-CCChhHHHHHH
Confidence 864322 2234566889999999999998643 45679999999877642 2 45689999999
Q ss_pred HHHHHHHHHHhhc-CCceEEEEecccccCC
Q psy16545 148 FIEEMLKDLSKAH-KEWNIISLRYFNPVGA 176 (600)
Q Consensus 148 ~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~ 176 (600)
+.+.+++.++.++ +++++++++||.|.++
T Consensus 159 a~~~l~~~la~e~~~~i~vn~v~PG~v~T~ 188 (269)
T 3vtz_A 159 ALLGLTRSVAIDYAPKIRCNAVCPGTIMTP 188 (269)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHhcCCCEEEEEEECCCcCc
Confidence 9999999999886 4799999999999987
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=4.3e-13 Score=131.83 Aligned_cols=150 Identities=15% Similarity=0.034 Sum_probs=110.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d 68 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|+++.+++.+++++ +.+.. ++|
T Consensus 9 lVTGas~gIG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g~iD 81 (254)
T 1hdc_A 9 IITGGARGLGAEAARQA--VAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAY-----AREEFGSVD 81 (254)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHH-----HHHHHSCCC
T ss_pred EEECCCcHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHH-----HHHHcCCCC
Confidence 48999999999996533 2233344433332 5799999988885554 33322 699
Q ss_pred EEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHH----HHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEV----MKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 69 ~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a----~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+||||||..... ...+++...+++|+.++.+++++ +++.+.+++|++||...+.. . .+.+
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~~ 149 (254)
T 1hdc_A 82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG-----------L-ALTS 149 (254)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------C-TTCH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC-----------C-CCch
Confidence 999999976432 12345667999999999866555 45556789999999866532 2 4568
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.|+.||.+.+.+++.++.++ .+++++++|||.++++
T Consensus 150 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 187 (254)
T 1hdc_A 150 SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP 187 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCc
Confidence 99999999999999998775 3899999999999987
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.42 E-value=6.9e-13 Score=132.36 Aligned_cols=151 Identities=13% Similarity=0.069 Sum_probs=112.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|.+|+.+++. +...+.+++..+|+ .+|++|.+++.+++++ +.+.
T Consensus 29 lVTGas~GIG~~ia~~--la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~ 101 (281)
T 3v2h_A 29 VITGSTSGIGLAIART--LAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAM-----VADR 101 (281)
T ss_dssp EEETCSSHHHHHHHHH--HHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHH-----HHHH
T ss_pred EEeCCCcHHHHHHHHH--HHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHH-----HHHH
Confidence 5899999999999653 22233344444441 5899999998886654 3333
Q ss_pred C-CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 65 H-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 ~-~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
. ++|+||||||...... ..+++...+++|+.|+.++++++ ++.+.+++|++||...+.. .
T Consensus 102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~ 170 (281)
T 3v2h_A 102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVA-----------S 170 (281)
T ss_dssp TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------C
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccC-----------C
Confidence 2 6999999999864322 33456679999999999999987 4456679999999865532 2
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...+.|+.||.+.+.+++.++.++ .++++++++||.|.++.
T Consensus 171 -~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 213 (281)
T 3v2h_A 171 -PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPL 213 (281)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcc
Confidence 456899999999999999998775 38999999999999985
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.41 E-value=3.4e-13 Score=131.27 Aligned_cols=149 Identities=13% Similarity=0.046 Sum_probs=112.1
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------cccccChHHhhhHHhhhhccccccc-CCCCEEEEcCcccC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFAAVKA 78 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~~~ 78 (600)
|||++|.+|+.+.+... ..+.+++.++|+ .+|++|.+++.+++++ + +. .++|+||||||...
T Consensus 7 VtGasggiG~~la~~l~--~~G~~V~~~~r~~~~~~~~~~~~D~~~~~~~~~~~~~-----~-~~~~~~d~li~~ag~~~ 78 (242)
T 1uay_A 7 VTGGASGLGRAAALALK--ARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVAR-----A-QEEAPLFAVVSAAGVGL 78 (242)
T ss_dssp EETTTSHHHHHHHHHHH--HHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHH-----H-HHHSCEEEEEECCCCCC
T ss_pred EeCCCChHHHHHHHHHH--HCCCEEEEEccCccccceEEEeCCCCCHHHHHHHHHH-----H-HhhCCceEEEEcccccC
Confidence 89999999999966332 223344444443 5899999998885554 3 21 26999999999864
Q ss_pred cccCC----C----ChhhhHHhHHHHHHHHHHHHHHc----C------CCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 79 VGESM----Q----EPLMYYKNNLIATINLLEVMKSH----G------VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 79 ~~~~~----~----~~~~~~~~Nv~gt~~ll~a~~~~----~------~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
..... . ++...+++|+.++.++++++.+. + .+++|++||...+.. . .+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~-~~~~ 146 (242)
T 1uay_A 79 AEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG-----------Q-IGQA 146 (242)
T ss_dssp CCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC-----------C-TTCH
T ss_pred cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC-----------C-CCCc
Confidence 32211 1 56778999999999999998754 1 128999999877653 2 4568
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.|+.||.+.+.+++.++.+. .+++++++|||.++++.
T Consensus 147 ~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 185 (242)
T 1uay_A 147 AYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPL 185 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchh
Confidence 99999999999999888764 38999999999999984
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.41 E-value=5.7e-13 Score=132.74 Aligned_cols=150 Identities=13% Similarity=0.070 Sum_probs=108.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------------cccccChHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------------EGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------------~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+
T Consensus 10 lVTGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~ 82 (278)
T 1spx_A 10 IITGSSNGIGRATAVLFA--REGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILST-----TLG 82 (278)
T ss_dssp EETTTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH-----HHH
T ss_pred EEeCCCchHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHH-----HHH
Confidence 589999999999955322 223333333332 5799999988885554 332
Q ss_pred cC-CCCEEEEcCcccCccc--------CCCChhhhHHhHHHHHHHHHHHHHHc----CCCeEEEecCccc-cCCCCCCCC
Q psy16545 64 TH-DIDCVIHFAAVKAVGE--------SMQEPLMYYKNNLIATINLLEVMKSH----GVYQLVFSSSCTV-YGEPQFLPI 129 (600)
Q Consensus 64 ~~-~~d~Vih~A~~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~r~I~~SS~~v-yg~~~~~~~ 129 (600)
.. ++|+||||||...... ..+++...+++|+.|+.++++++.+. + +++|++||... +..
T Consensus 83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~------ 155 (278)
T 1spx_A 83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHA------ 155 (278)
T ss_dssp HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSC------
T ss_pred HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccC------
Confidence 22 6999999999764321 33456678999999999999987653 5 79999999865 431
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 130 TEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 130 ~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.+. .+++++++|||.+.++.
T Consensus 156 -----~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 199 (278)
T 1spx_A 156 -----T-PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF 199 (278)
T ss_dssp -----C-TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred -----C-CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCcc
Confidence 2 456789999999999999988764 38999999999999985
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.41 E-value=6.3e-13 Score=131.49 Aligned_cols=151 Identities=14% Similarity=0.167 Sum_probs=113.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhccccccc-CCCCEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCT-HDIDCVI 71 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vi 71 (600)
-|||++|.+|+.+++. +...+.+++.++|+ .+|++|.+++.+++++ +.+. .++|+||
T Consensus 20 lVTGas~gIG~aia~~--l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g~iD~lv 92 (266)
T 3p19_A 20 VITGASSGIGEAIARR--FSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITR-----AEKIYGPADAIV 92 (266)
T ss_dssp EEESTTSHHHHHHHHH--HHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHH-----HHHHHCSEEEEE
T ss_pred EEECCCCHHHHHHHHH--HHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHH-----HHHHCCCCCEEE
Confidence 4899999999999653 33333444444443 6899999998885554 3322 2699999
Q ss_pred EcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHH
Q psy16545 72 HFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYG 143 (600)
Q Consensus 72 h~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~ 143 (600)
||||...... ..+++...+++|+.|+.++++++ ++.+.+++|++||...+.. . .+.+.|+
T Consensus 93 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----------~-~~~~~Y~ 160 (266)
T 3p19_A 93 NNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKT-----------F-PDHAAYC 160 (266)
T ss_dssp ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------C-TTCHHHH
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCC-----------C-CCCchHH
Confidence 9999864322 22445678999999999987776 3456679999999876532 2 4568999
Q ss_pred HHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 144 KTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 144 ~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.||.+.+.+++.++.++ .++++++++||.|.++.
T Consensus 161 asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 196 (266)
T 3p19_A 161 GTKFAVHAISENVREEVAASNVRVMTIAPSAVKTEL 196 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccch
Confidence 99999999999998875 38999999999999885
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=6.4e-13 Score=132.28 Aligned_cols=153 Identities=10% Similarity=0.068 Sum_probs=112.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhccccccc-CC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCT-HD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~ 66 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+. .+
T Consensus 20 lITGasggiG~~~a~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~ 92 (278)
T 2bgk_A 20 IITGGAGGIGETTAKLFV--RYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDT-----TIAKHGK 92 (278)
T ss_dssp EEESTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHH-----HHHHHSC
T ss_pred EEECCCCHHHHHHHHHHH--HCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHH-----HHHHcCC
Confidence 589999999999855322 122222222221 6899999998885544 3222 26
Q ss_pred CCEEEEcCcccCcc------cCCCChhhhHHhHHHHHHHHHHHHHHc----CCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVG------ESMQEPLMYYKNNLIATINLLEVMKSH----GVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 67 ~d~Vih~A~~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
+|+||||||..... ...+++...+++|+.++.++++++.+. +.+++|++||...|... +
T Consensus 93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~- 161 (278)
T 2bgk_A 93 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG----------E- 161 (278)
T ss_dssp CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC----------T-
T ss_pred CCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCC----------C-
Confidence 99999999976421 112445678999999999999988653 56799999999877531 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAHP 178 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~ 178 (600)
.+.+.|+.||.+.+.+++.++.+. .+++++++|||.++|+..
T Consensus 162 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 205 (278)
T 2bgk_A 162 GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLL 205 (278)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCC
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhh
Confidence 256789999999999999998763 389999999999999964
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.41 E-value=5e-13 Score=131.59 Aligned_cols=151 Identities=10% Similarity=0.047 Sum_probs=112.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d 68 (600)
-|||+++.+|+++++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+.. ++|
T Consensus 11 lVTGas~gIG~aia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g~id 83 (257)
T 3tpc_A 11 IVTGASSGLGAAVTRML--AQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAF-----AKQEFGHVH 83 (257)
T ss_dssp EEESTTSHHHHHHHHHH--HHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHH-----HHHHHSCCC
T ss_pred EEeCCCCHHHHHHHHHH--HHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHH-----HHHHcCCCC
Confidence 48999999999996532 2223333333333 5899999998885554 33322 699
Q ss_pred EEEEcCcccCcc--------cCCCChhhhHHhHHHHHHHHHHHHHHc----------CCCeEEEecCccccCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVG--------ESMQEPLMYYKNNLIATINLLEVMKSH----------GVYQLVFSSSCTVYGEPQFLPIT 130 (600)
Q Consensus 69 ~Vih~A~~~~~~--------~~~~~~~~~~~~Nv~gt~~ll~a~~~~----------~~~r~I~~SS~~vyg~~~~~~~~ 130 (600)
++|||||..... ...+++...+++|+.|+.++++++.+. +..++|++||...+..
T Consensus 84 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~------- 156 (257)
T 3tpc_A 84 GLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG------- 156 (257)
T ss_dssp EEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC-------
T ss_pred EEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC-------
Confidence 999999986432 123456778999999999999998653 3458999999876532
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 131 E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.++ .++++++++||.|.++.
T Consensus 157 ----~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 200 (257)
T 3tpc_A 157 ----Q-IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPM 200 (257)
T ss_dssp ----C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-
T ss_pred ----C-CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChh
Confidence 2 456899999999999999998874 28999999999999885
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.41 E-value=1e-12 Score=128.39 Aligned_cols=158 Identities=13% Similarity=-0.048 Sum_probs=110.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCC--ccEEecccc------------------cccccChHHhhhHHhhhhcccccccC--
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKP--VPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~--~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-- 65 (600)
-|||++|.+|+++.+.. ...+ .+++.++|+ .+|+++.+++.+++++ +.+..
T Consensus 7 lItGasggiG~~la~~l--~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g~ 79 (250)
T 1yo6_A 7 VVTGANRGIGLGLVQQL--VKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSK-----VGEIVGS 79 (250)
T ss_dssp EESSCSSHHHHHHHHHH--HTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHH-----HHHHHGG
T ss_pred EEecCCchHHHHHHHHH--HhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHH-----HHHhcCC
Confidence 48999999999996533 2233 344433332 5899999888885544 32221
Q ss_pred -CCCEEEEcCcccC-cc----cCCCChhhhHHhHHHHHHHHHHHHHHc----------C-----CCeEEEecCccccCCC
Q psy16545 66 -DIDCVIHFAAVKA-VG----ESMQEPLMYYKNNLIATINLLEVMKSH----------G-----VYQLVFSSSCTVYGEP 124 (600)
Q Consensus 66 -~~d~Vih~A~~~~-~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~----------~-----~~r~I~~SS~~vyg~~ 124 (600)
++|+||||||... .. ...+++...+++|+.++.++++++... + .++||++||...+...
T Consensus 80 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 159 (250)
T 1yo6_A 80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD 159 (250)
T ss_dssp GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred CCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence 6999999999865 21 123446678999999999999887542 4 6799999998665431
Q ss_pred CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 125 QFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 125 ~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+..+. .+.+.|+.||.+.+.+++.++.++ .+++++++|||.+.++.
T Consensus 160 ~----~~~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 209 (250)
T 1yo6_A 160 N----TSGSAQ-FPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL 209 (250)
T ss_dssp C----CSTTSS-SCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----
T ss_pred c----cccccc-CCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCC
Confidence 1 112233 466889999999999999998775 38999999999998875
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=1e-12 Score=128.92 Aligned_cols=153 Identities=12% Similarity=0.040 Sum_probs=111.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------------cccccChHHhhhHHhhhhcccccccCCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------------EGDIVSMYANTDLAQKELGWSARCTHDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d 68 (600)
-|||++|.+|+++.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+..++|
T Consensus 15 lITGasggiG~~la~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~id 87 (254)
T 2wsb_A 15 AVTGAGSGIGLEICRAFA--ASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAE-----AEAVAPVS 87 (254)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHH-----HHHHSCCC
T ss_pred EEECCCcHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHH-----HHhhCCCc
Confidence 589999999999965332 223333333332 5799999988885544 22213799
Q ss_pred EEEEcCcccCcccC----CCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 69 ~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+||||||....... .+++...+++|+.++.++++++ ++.+.+++|++||...+... +. .|.+
T Consensus 88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~-~~~~ 157 (254)
T 2wsb_A 88 ILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN---------RP-QFAS 157 (254)
T ss_dssp EEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SS-SCBH
T ss_pred EEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC---------CC-Ccch
Confidence 99999998643221 2335678899999988887765 44567899999998765421 22 3448
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.|+.||.+.+.+++.++.++ .+++++++|||.++++.
T Consensus 158 ~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~ 196 (254)
T 2wsb_A 158 SYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEM 196 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchh
Confidence 99999999999999988764 38999999999999984
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.41 E-value=4.8e-13 Score=131.95 Aligned_cols=151 Identities=11% Similarity=-0.019 Sum_probs=112.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|++|++++.+++++ +.+.
T Consensus 11 lVTGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~ 83 (260)
T 2z1n_A 11 VVTAGSSGLGFASALELA--RNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEK-----ARDL 83 (260)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH-----HHHT
T ss_pred EEECCCchHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHH-----HHHh
Confidence 589999999999955322 122222222221 6899999998886655 5444
Q ss_pred CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+||||||..... ...+++...+++|+.++.++++++. +.+.+++|++||...+.. .
T Consensus 84 ~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~- 151 (260)
T 2z1n_A 84 GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRP-----------W- 151 (260)
T ss_dssp TCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------C-
T ss_pred cCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCC-----------C-
Confidence 4699999999975432 1234567799999999988877763 456789999999876642 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .+++++++|||.++++.
T Consensus 152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 194 (260)
T 2z1n_A 152 QDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDR 194 (260)
T ss_dssp TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCC
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccch
Confidence 456799999999999999998775 38999999999999985
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.41 E-value=9.1e-13 Score=131.81 Aligned_cols=151 Identities=14% Similarity=-0.008 Sum_probs=112.0
Q ss_pred cCCCCc--chHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 8 LGTGQG--TSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 8 ~vtG~~--g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
-|||++ |.+|+++++... ..+.+++.++|+ .+|++|.+++.+++++ +.+..
T Consensus 25 lVTGas~~~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~-----~~~~~ 97 (285)
T 2p91_A 25 LITGVANERSIAYGIAKSFH--REGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKF-----LEENW 97 (285)
T ss_dssp EECCCSSTTSHHHHHHHHHH--HTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHH-----HHHHT
T ss_pred EEECCCCCCcHHHHHHHHHH--HcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHH-----HHHHc
Confidence 589998 889999965322 223333333332 5799999988885554 33322
Q ss_pred -CCCEEEEcCcccCc--------ccCCCChhhhHHhHHHHHHHHHHHHHHcC---CCeEEEecCccccCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAV--------GESMQEPLMYYKNNLIATINLLEVMKSHG---VYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 66 -~~d~Vih~A~~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
++|+||||||.... ....+++...+++|+.|+.++++++.+.- .+++|++||...+..
T Consensus 98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~---------- 167 (285)
T 2p91_A 98 GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV---------- 167 (285)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB----------
T ss_pred CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC----------
Confidence 69999999998643 12234566799999999999999987652 269999999765431
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.++ .++++++++||.|+++.
T Consensus 168 -~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 211 (285)
T 2p91_A 168 -V-PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLA 211 (285)
T ss_dssp -C-TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSC
T ss_pred -C-CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCch
Confidence 2 456789999999999999998775 38999999999999985
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.41 E-value=7.6e-13 Score=131.51 Aligned_cols=151 Identities=17% Similarity=0.115 Sum_probs=110.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc--
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-- 64 (600)
-|||++|.+|+.+++... ..+.+++.++|+ .+|++|++++.+++++ +.+.
T Consensus 25 lVTGas~gIG~aia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 97 (273)
T 1ae1_A 25 LVTGGSKGIGYAIVEELA--GLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQT-----VAHVFD 97 (273)
T ss_dssp EEESCSSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHTT
T ss_pred EEECCcchHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH-----HHHHcC
Confidence 589999999999955322 222333333332 6899999988885554 3333
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+||||||...... ..+++...+++|+.++.++++++. +.+.+++|++||...+.. .
T Consensus 98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~- 165 (273)
T 1ae1_A 98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA-----------L- 165 (273)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC-----------C-
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCC-----------C-
Confidence 26999999999864321 224566788999999999999873 445679999999877642 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
++.+.|+.||.+.+.+++.++.++ .++++++++||.++++.
T Consensus 166 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (273)
T 1ae1_A 166 PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL 208 (273)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCch
Confidence 456899999999999999998775 38999999999999985
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.41 E-value=7.4e-13 Score=131.78 Aligned_cols=151 Identities=12% Similarity=-0.006 Sum_probs=113.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||++|.+|+.+++. +...+.+++.++|+ .+|++|.+++.+++++ +.+. .++|
T Consensus 33 lVTGas~gIG~aia~~--la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g~iD 105 (277)
T 3gvc_A 33 IVTGAGAGIGLAVARR--LADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDA-----CVAAFGGVD 105 (277)
T ss_dssp EETTTTSTHHHHHHHH--HHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHH-----HHHHHSSCC
T ss_pred EEECCCcHHHHHHHHH--HHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHH-----HHHHcCCCC
Confidence 5899999999999653 22333444444443 5799999998885554 3332 2699
Q ss_pred EEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 69 ~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+||||||..... ...+++...+++|+.|+.++++++.. .+..++|++||...+. +. .+.+
T Consensus 106 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~-~~~~ 173 (277)
T 3gvc_A 106 KLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV-----------AV-GGTG 173 (277)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------CC-TTBH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-----------CC-CCch
Confidence 999999986432 22345677999999999999998744 4557899999976543 22 4568
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.|+.||.+.+.+++.++.++ .++++++++||.|++|.
T Consensus 174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 212 (277)
T 3gvc_A 174 AYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM 212 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch
Confidence 99999999999999998775 38999999999999873
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.40 E-value=6.6e-13 Score=131.22 Aligned_cols=150 Identities=14% Similarity=0.000 Sum_probs=112.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------cccccChHHhhhHHhhhhccccccc-CCCCEEEEcCcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFAAV 76 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~ 76 (600)
-|||++|.+|+.+++... ..+.+++.++|+ .+|++|.+++.+++++ +.+. .++|+||||||.
T Consensus 12 lVTGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~-----~~~~~g~iD~lv~~Ag~ 84 (264)
T 2dtx_A 12 IVTGASMGIGRAIAERFV--DEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDH-----IFKEYGSISVLVNNAGI 84 (264)
T ss_dssp EEESCSSHHHHHHHHHHH--HTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHH-----HHHHHSCCCEEEECCCC
T ss_pred EEeCCCCHHHHHHHHHHH--HCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHH-----HHHHcCCCCEEEECCCC
Confidence 589999999999966332 233344444443 6899999998885554 3322 269999999998
Q ss_pred cCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q psy16545 77 KAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHF 148 (600)
Q Consensus 77 ~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~ 148 (600)
..... ..+++...+++|+.|+.++++++.+ .+.+++|++||...+.. . .+.+.|+.||.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~~~Y~~sK~a 152 (264)
T 2dtx_A 85 ESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII-----------T-KNASAYVTSKHA 152 (264)
T ss_dssp CCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSC-----------C-TTBHHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccC-----------C-CCchhHHHHHHH
Confidence 64322 2345677999999999999998754 35579999999876542 2 456899999999
Q ss_pred HHHHHHHHHhhcC-CceEEEEecccccCC
Q psy16545 149 IEEMLKDLSKAHK-EWNIISLRYFNPVGA 176 (600)
Q Consensus 149 ~e~~~~~~~~~~~-~~~~~ilR~~~v~G~ 176 (600)
.+.+++.++.++. .+++++++||.+.++
T Consensus 153 ~~~~~~~la~e~~~~i~vn~v~PG~v~t~ 181 (264)
T 2dtx_A 153 VIGLTKSIALDYAPLLRCNAVCPATIDTP 181 (264)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEEECSBCSH
T ss_pred HHHHHHHHHHHhcCCcEEEEEEeCCCcCc
Confidence 9999999998862 299999999999876
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.5e-12 Score=127.33 Aligned_cols=148 Identities=16% Similarity=0.107 Sum_probs=110.3
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCCE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DIDC 69 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~ 69 (600)
|||++|.+|+.+++... ..+.+++.++|+ .+|++|.+++.+++++ +.+.. ++|+
T Consensus 5 VTGas~gIG~aia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g~iD~ 77 (248)
T 3asu_A 5 VTGATAGFGECITRRFI--QQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLAS-----LPAEWCNIDI 77 (248)
T ss_dssp ETTTTSTTHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHT-----SCTTTCCCCE
T ss_pred EECCCChHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHH-----HHHhCCCCCE
Confidence 79999999999865322 223333333332 6899999999886655 43332 5999
Q ss_pred EEEcCcccC-c----ccCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 70 VIHFAAVKA-V----GESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 70 Vih~A~~~~-~----~~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
||||||... . ....+++...+++|+.|+.++++++. +.+.+++|++||...+. +. .+.+
T Consensus 78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~-~~~~ 145 (248)
T 3asu_A 78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----------PY-AGGN 145 (248)
T ss_dssp EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------CC-TTCH
T ss_pred EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhcc-----------CC-CCCc
Confidence 999999752 1 11234567799999999999998875 44567999999986543 22 4568
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVG 175 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G 175 (600)
.|+.||.+.+.+++.++.+. .++++++++||.|.|
T Consensus 146 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~g 182 (248)
T 3asu_A 146 VYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG 182 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccccc
Confidence 99999999999999998875 389999999999995
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.40 E-value=5.7e-13 Score=129.65 Aligned_cols=151 Identities=15% Similarity=0.078 Sum_probs=112.2
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc-------------cccccChHHhhhHHhhhhccccccc-CCCCEEEEcC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFA 74 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A 74 (600)
|||++|.+|+.+.+.. ...+.+++.++|+ .+|+++ +++.+++++ +.+. .++|+|||||
T Consensus 7 VTGas~giG~~~a~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~-----~~~~~g~id~lv~~A 78 (239)
T 2ekp_A 7 VTGGSRGIGRAIAEAL--VARGYRVAIASRNPEEAAQSLGAVPLPTDLEK-DDPKGLVKR-----ALEALGGLHVLVHAA 78 (239)
T ss_dssp EETTTSHHHHHHHHHH--HHTTCEEEEEESSCHHHHHHHTCEEEECCTTT-SCHHHHHHH-----HHHHHTSCCEEEECC
T ss_pred EeCCCcHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHhhCcEEEecCCch-HHHHHHHHH-----HHHHcCCCCEEEECC
Confidence 7999999999996633 3334455555554 478888 776664443 3322 2699999999
Q ss_pred cccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHH
Q psy16545 75 AVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTK 146 (600)
Q Consensus 75 ~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK 146 (600)
|...... ..+++...+++|+.++.++++++. +.+.+++|++||...+... +. .+.+.|+.||
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~-~~~~~Y~~sK 148 (239)
T 2ekp_A 79 AVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG---------GP-VPIPAYTTAK 148 (239)
T ss_dssp CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------TT-SCCHHHHHHH
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC---------CC-CCCccHHHHH
Confidence 9764321 234567799999999999998873 4467899999998776531 12 3568999999
Q ss_pred HHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 147 HFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 147 ~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.+++.++.+. .+++++++|||.+.++.
T Consensus 149 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 181 (239)
T 2ekp_A 149 TALLGLTRALAKEWARLGIRVNLLCPGYVETEF 181 (239)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCCccCch
Confidence 99999999998775 38999999999999874
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.40 E-value=6e-13 Score=130.11 Aligned_cols=148 Identities=10% Similarity=-0.014 Sum_probs=109.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHHhhhHHhhhhccccccc-CCCCEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYANTDLAQKELGWSARCT-HDIDCV 70 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~V 70 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|++|.+++.+ +.+. .++|+|
T Consensus 10 lVTGas~gIG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---------~~~~~~~id~l 78 (246)
T 2ag5_A 10 ILTAAAQGIGQAAALAF--AREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQ---------FANEVERLDVL 78 (246)
T ss_dssp EESSTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHH---------HHHHCSCCSEE
T ss_pred EEeCCCcHHHHHHHHHH--HHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHH---------HHHHhCCCCEE
Confidence 58999999999996532 2223334433332 579999988876 3322 269999
Q ss_pred EEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChH
Q psy16545 71 IHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVY 142 (600)
Q Consensus 71 ih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y 142 (600)
|||||...... ..+++...+++|+.++.++++++. +.+.+++|++||...+... + .+.+.|
T Consensus 79 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~-~~~~~Y 147 (246)
T 2ag5_A 79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG----------V-VNRCVY 147 (246)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----------C-TTBHHH
T ss_pred EECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC----------C-CCCccH
Confidence 99999864321 224566789999999999999875 3466799999998654320 1 256789
Q ss_pred HHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 143 GKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 143 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.||.+.+.+++.++.+. .+++++++|||.+++|.
T Consensus 148 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 184 (246)
T 2ag5_A 148 STTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS 184 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcc
Confidence 999999999999998764 38999999999999984
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.40 E-value=3.7e-13 Score=134.37 Aligned_cols=151 Identities=15% Similarity=0.045 Sum_probs=111.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------------cccccChHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------------EGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------------~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
-|||++|.+|+++++.. ...+.+++..+|+ .+|++|++++.+++++ +.+
T Consensus 15 lVTGas~gIG~aia~~l--~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~ 87 (281)
T 3svt_A 15 LVTGGGSGIGKGVAAGL--VAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA-----VTA 87 (281)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH-----HHH
T ss_pred EEeCCCcHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH-----HHH
Confidence 48999999999995532 2223333333332 5899999998885554 332
Q ss_pred c-CCCCEEEEcCcccCc-----ccCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCC
Q psy16545 64 T-HDIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 64 ~-~~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
. .++|++|||||.... ....+++...+++|+.|+.++++++.+ .+-.+||++||...+..
T Consensus 88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------- 157 (281)
T 3svt_A 88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNT---------- 157 (281)
T ss_dssp HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC----------
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCC----------
Confidence 2 269999999997322 112345667999999999999998754 34459999999876642
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.++ .++++++++||.|.++.
T Consensus 158 -~-~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 201 (281)
T 3svt_A 158 -H-RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDL 201 (281)
T ss_dssp -C-TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred -C-CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence 2 456899999999999999998876 27999999999999884
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.40 E-value=1e-12 Score=130.51 Aligned_cols=151 Identities=17% Similarity=0.160 Sum_probs=112.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTHDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 67 (600)
-|||++|.+|+.+++.. ...+.+++.++++ .+|++|.+++.++.+. +-+..++
T Consensus 35 lVTGas~GIG~aia~~l--a~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~g~i 107 (273)
T 3uf0_A 35 VVTGAGSGIGRAIAHGY--ARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEE-----LAATRRV 107 (273)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH-----HHHHSCC
T ss_pred EEeCCCcHHHHHHHHHH--HHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-----HHhcCCC
Confidence 58999999999996532 2233333333322 5899999988875332 1111379
Q ss_pred CEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 68 d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
|+||||||...... ..+++...+++|+.|+.++++++ ++.+.+++|++||...+.. . .+.
T Consensus 108 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-----------~-~~~ 175 (273)
T 3uf0_A 108 DVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQG-----------G-RNV 175 (273)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------C-SSC
T ss_pred cEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCC-----------C-CCC
Confidence 99999999875422 23456779999999999999987 3456679999999876532 2 456
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.|+.||.+.+.+++.++.++ .++++++++||.|.++.
T Consensus 176 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 215 (273)
T 3uf0_A 176 AAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTAN 215 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence 899999999999999999874 28999999999999884
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.40 E-value=1.3e-12 Score=128.93 Aligned_cols=152 Identities=17% Similarity=0.047 Sum_probs=111.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+.+++... ..+.+++..+|+ .+|++|.+++.+++++ +.+.
T Consensus 14 lVTGas~gIG~aia~~l~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~ 86 (262)
T 3pk0_A 14 VVTGGTKGIGRGIATVFA--RAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGR-----AVEEF 86 (262)
T ss_dssp EETTCSSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHH-----HHHHH
T ss_pred EEECCCcHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHH-----HHHHh
Confidence 489999999999855322 222222222221 7899999998885554 3332
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc----CCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----GVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|++|||||...... ..+++...+++|+.++.++++++.+. +..++|++||....-. +.
T Consensus 87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~----------~~- 155 (262)
T 3pk0_A 87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT----------GY- 155 (262)
T ss_dssp SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTB----------CC-
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC----------CC-
Confidence 26999999999864322 23456678999999999999987553 6679999999754210 12
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
++.+.|+.||.+.+.+++.++.++ .++++++++||.|+++.
T Consensus 156 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 198 (262)
T 3pk0_A 156 PGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEG 198 (262)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred CCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcc
Confidence 456899999999999999999874 28999999999999884
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.40 E-value=4.8e-13 Score=133.32 Aligned_cols=155 Identities=12% Similarity=0.012 Sum_probs=115.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------------------cccccChHHhhhHHh
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------------------EGDIVSMYANTDLAQ 54 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------------~~Dl~~~~~~~~~~~ 54 (600)
-|||++|.+|+.+++. +...+.+++.+|++ .+|++|.+++.++++
T Consensus 17 lVTGas~gIG~~ia~~--l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 94 (278)
T 3sx2_A 17 FITGAARGQGRAHAVR--LAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQ 94 (278)
T ss_dssp EEESTTSHHHHHHHHH--HHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred EEECCCChHHHHHHHH--HHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 4899999999999653 33334444444432 689999999888665
Q ss_pred hhhccccccc-CCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHH----cC-CCeEEEecCccccCCCCCCC
Q psy16545 55 KELGWSARCT-HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKS----HG-VYQLVFSSSCTVYGEPQFLP 128 (600)
Q Consensus 55 ~~~~~~~~~~-~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~r~I~~SS~~vyg~~~~~~ 128 (600)
+ +.+. .++|+||||||........+++...+++|+.|+.++++++.. .+ ..++|++||...+....
T Consensus 95 ~-----~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--- 166 (278)
T 3sx2_A 95 A-----GLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG--- 166 (278)
T ss_dssp H-----HHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC---
T ss_pred H-----HHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc---
Confidence 4 3332 269999999998755444566778999999999999998743 22 46899999986543211
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 129 ITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 129 ~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+. .+.+.|+.||.+.+.+++.++.++ .+++++.++||.|.++.
T Consensus 167 ----~~~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 212 (278)
T 3sx2_A 167 ----SAD-PGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPM 212 (278)
T ss_dssp ----CSS-HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTT
T ss_pred ----cCC-CCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCcc
Confidence 122 345679999999999999998776 27999999999999985
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.40 E-value=6.5e-13 Score=130.66 Aligned_cols=151 Identities=12% Similarity=0.059 Sum_probs=112.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+++++... ..+.+++..+|+ .+|++|.+++.+++++ +.+. .
T Consensus 16 lVTGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g 88 (256)
T 3gaf_A 16 IVTGAAAGIGRAIAGTFA--KAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKA-----ALDQFG 88 (256)
T ss_dssp EECSCSSHHHHHHHHHHH--HHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHHS
T ss_pred EEECCCCHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-----HHHHcC
Confidence 589999999999855322 112222222222 6899999998885554 3332 2
Q ss_pred CCCEEEEcCcccCcc---cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVG---ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~---~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
++|++|||||..... ...++++..+++|+.|+.++++++. +.+..++|++||...+. +. .+
T Consensus 89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~-~~ 156 (256)
T 3gaf_A 89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN-----------TN-VR 156 (256)
T ss_dssp CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC-----------CC-TT
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC-----------CC-CC
Confidence 699999999986542 2334566799999999999999973 45567999999986653 22 45
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.|+.||.+.+.+++.++.++ .+++++.++||.+.++.
T Consensus 157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 197 (256)
T 3gaf_A 157 MASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDA 197 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCch
Confidence 6899999999999999998875 38999999999999873
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=9.1e-13 Score=129.95 Aligned_cols=151 Identities=15% Similarity=0.051 Sum_probs=111.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .
T Consensus 18 lVTGas~gIG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g 90 (260)
T 2zat_A 18 LVTASTDGIGLAIARRL--AQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAM-----AVNLHG 90 (260)
T ss_dssp EESSCSSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHHS
T ss_pred EEECCCcHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH-----HHHHcC
Confidence 58999999999996532 2223334433332 5799999888775543 3222 2
Q ss_pred CCCEEEEcCcccCc-----ccCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|+||||||.... ....+++...+++|+.++.++++++. +.+.+++|++||...+.. .
T Consensus 91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~- 158 (260)
T 2zat_A 91 GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHP-----------F- 158 (260)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------C-
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCC-----------C-
Confidence 69999999997532 11234466789999999999998864 456789999999877642 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .++++++++||.+.++.
T Consensus 159 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 201 (260)
T 2zat_A 159 PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNF 201 (260)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSST
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCcc
Confidence 456899999999999999998775 38999999999999874
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.40 E-value=4e-13 Score=130.51 Aligned_cols=150 Identities=12% Similarity=0.124 Sum_probs=113.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------cccccChHHhhhHHhhhhccccccc---CCCCEEEEc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------EGDIVSMYANTDLAQKELGWSARCT---HDIDCVIHF 73 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~Dl~~~~~~~~~~~~~~~~~~~~~---~~~d~Vih~ 73 (600)
-|||++|.+|+.+.+. +...+.+++.++|+ .+|+++.+++.+++++ +.+. .++|+||||
T Consensus 7 lITGas~gIG~~~a~~--l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~g~id~lv~~ 79 (236)
T 1ooe_A 7 IVYGGKGALGSAILEF--FKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQ-----TASSLQGSQVDGVFCV 79 (236)
T ss_dssp EEETTTSHHHHHHHHH--HHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHH-----HHHHHTTCCEEEEEEC
T ss_pred EEECCCcHHHHHHHHH--HHHCCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHH-----HHHHhCCCCCCEEEEC
Confidence 4899999999999663 33344555555554 4899999888875544 3332 279999999
Q ss_pred CcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHH
Q psy16545 74 AAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTK 146 (600)
Q Consensus 74 A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK 146 (600)
||...... ..+++...+++|+.++.++++++.+. ...++|++||...+. +. .+.+.|+.||
T Consensus 80 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~-~~~~~Y~~sK 147 (236)
T 1ooe_A 80 AGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG-----------PT-PSMIGYGMAK 147 (236)
T ss_dssp CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CC-TTBHHHHHHH
T ss_pred CcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc-----------CC-CCcHHHHHHH
Confidence 99764221 22445678999999999999998764 225899999987653 22 4568899999
Q ss_pred HHHHHHHHHHHhhc----CCceEEEEecccccCC
Q psy16545 147 HFIEEMLKDLSKAH----KEWNIISLRYFNPVGA 176 (600)
Q Consensus 147 ~~~e~~~~~~~~~~----~~~~~~ilR~~~v~G~ 176 (600)
.+.+.+++.++.++ .++++++++||.+.++
T Consensus 148 ~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~ 181 (236)
T 1ooe_A 148 AAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP 181 (236)
T ss_dssp HHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH
T ss_pred HHHHHHHHHHHHHhcccCCCeEEEEEecCcccCc
Confidence 99999999998875 2599999999999887
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.40 E-value=9.9e-13 Score=129.82 Aligned_cols=151 Identities=16% Similarity=0.080 Sum_probs=111.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+++. +...+.+++.++|+ .+|++|.+++.+++++ +.+. .
T Consensus 8 lVTGas~GIG~aia~~--la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g 80 (264)
T 3tfo_A 8 LITGASGGIGEGIARE--LGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQA-----AVDTWG 80 (264)
T ss_dssp EESSTTSHHHHHHHHH--HHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH-----HHHHHS
T ss_pred EEeCCccHHHHHHHHH--HHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH-----HHHHcC
Confidence 4899999999999653 23334444444443 4899999998886554 3332 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|+||||||...... ..+++...+++|+.|+.++++++. +.+.+++|++||...+.. . .
T Consensus 81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-----------~-~ 148 (264)
T 3tfo_A 81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSV-----------V-P 148 (264)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------C-T
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHccc-----------C-C
Confidence 6999999999864322 234567799999999999988864 345679999999866532 2 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~ 177 (600)
..+.|+.||.+.+.+++.++.++++++++.++||.|..+.
T Consensus 149 ~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~ 188 (264)
T 3tfo_A 149 TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESEL 188 (264)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----
T ss_pred CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcc
Confidence 5678999999999999999988779999999999998774
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=8.9e-13 Score=132.98 Aligned_cols=151 Identities=13% Similarity=-0.026 Sum_probs=109.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
-|||++|++|+++.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+..
T Consensus 30 lITGasggiG~~la~~L~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~ 102 (302)
T 1w6u_A 30 FITGGGTGLGKGMTTLLS--SLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSE-----LIKVA 102 (302)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH-----HHHHT
T ss_pred EEECCCchHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHH-----HHHHc
Confidence 589999999999955322 122222222221 6899999988885554 32222
Q ss_pred -CCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHH-----cCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS-----HGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 66 -~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~-----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
++|+||||||..... ....++...+++|+.++.++++++.+ .+.+++|++||...+.. .
T Consensus 103 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~ 171 (302)
T 1w6u_A 103 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG-----------S 171 (302)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC-----------C
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC-----------C
Confidence 589999999975431 22345677999999999999888753 24469999999866532 2
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.+. .+++++++|||.++++.
T Consensus 172 -~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~ 214 (302)
T 1w6u_A 172 -GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG 214 (302)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred -CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcc
Confidence 466899999999999999998773 28999999999999984
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.4e-12 Score=130.09 Aligned_cols=152 Identities=15% Similarity=0.066 Sum_probs=114.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+++. +...+.+++.++|+ .+|++|.+++.+++++ +.+. .
T Consensus 12 lVTGas~GIG~aia~~--la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g 84 (280)
T 3tox_A 12 IVTGASSGIGRAAALL--FAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVEL-----AVRRFG 84 (280)
T ss_dssp EESSTTSHHHHHHHHH--HHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHH-----HHHHHS
T ss_pred EEECCCcHHHHHHHHH--HHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-----HHHHcC
Confidence 5899999999999653 33334445545543 5799999998885554 3332 2
Q ss_pred CCCEEEEcCcccCc-----ccCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|++|||||.... ....+++...+++|+.|+.++++++.. .+..++|++||...+.. +.
T Consensus 85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~- 153 (280)
T 3tox_A 85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA----------GF- 153 (280)
T ss_dssp CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB----------CC-
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC----------CC-
Confidence 69999999997632 122345677999999999999998743 45569999999876521 12
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .++++++++||.|.+|.
T Consensus 154 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 196 (280)
T 3tox_A 154 AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPA 196 (280)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTT
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCch
Confidence 456899999999999999998875 38999999999999985
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.39 E-value=2.3e-12 Score=127.01 Aligned_cols=151 Identities=13% Similarity=0.008 Sum_probs=113.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHHhhhHHhhhhcccccccC-CCCEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYANTDLAQKELGWSARCTH-DIDCV 70 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~V 70 (600)
-|||++|.+|+++++.. ...+.+++.++|+ .+|+++.+++.+++++ +.+.. ++|+|
T Consensus 31 lVTGas~gIG~aia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g~iD~l 103 (260)
T 3gem_A 31 LITGASQRVGLHCALRL--LEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDL-----LKTQTSSLRAV 103 (260)
T ss_dssp EESSTTSHHHHHHHHHH--HHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHH-----HHHHCSCCSEE
T ss_pred EEECCCCHHHHHHHHHH--HHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHH-----HHHhcCCCCEE
Confidence 58999999999996633 3334445555554 4799999998886654 33322 69999
Q ss_pred EEcCcccCcccC---CCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHH
Q psy16545 71 IHFAAVKAVGES---MQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYG 143 (600)
Q Consensus 71 ih~A~~~~~~~~---~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~ 143 (600)
|||||....... .+++...+++|+.|+.++++++.. .+..++|++||...+.. . .+.+.|+
T Consensus 104 v~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~-~~~~~Y~ 171 (260)
T 3gem_A 104 VHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG-----------S-SKHIAYC 171 (260)
T ss_dssp EECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC-----------C-SSCHHHH
T ss_pred EECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC-----------C-CCcHhHH
Confidence 999998643322 234556999999999999998754 35579999999866532 2 4568999
Q ss_pred HHHHHHHHHHHHHHhhc-CCceEEEEecccccCCC
Q psy16545 144 KTKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 144 ~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~ 177 (600)
.||.+.+.+++.++.++ +++++++++||.+.++.
T Consensus 172 asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~ 206 (260)
T 3gem_A 172 ATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQP 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCC
Confidence 99999999999999887 46999999999998774
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=7.9e-13 Score=130.56 Aligned_cols=148 Identities=14% Similarity=0.007 Sum_probs=109.3
Q ss_pred cCCCCcchHHHHHHHhhhccC-------------------------------CCccEEecccccccccChHHhhhHHhhh
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-------------------------------KPVPYIVEARREGDIVSMYANTDLAQKE 56 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-------------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 56 (600)
-|||++|.+|+.+.+.....+ .++.++ .+|++|.+++.+++++
T Consensus 11 lITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~D~~~~~~~~~~~~~- 84 (264)
T 2pd6_A 11 LVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAF-----QADVSEARAARCLLEQ- 84 (264)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEE-----ECCTTSHHHHHHHHHH-
T ss_pred EEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEE-----EecCCCHHHHHHHHHH-
Confidence 589999999999855322111 223445 6899999988885543
Q ss_pred hccccccc-CCC-CEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHHc----C-CCeEEEecCccccCCCC
Q psy16545 57 LGWSARCT-HDI-DCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSH----G-VYQLVFSSSCTVYGEPQ 125 (600)
Q Consensus 57 ~~~~~~~~-~~~-d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~~r~I~~SS~~vyg~~~ 125 (600)
+.+. .++ |+||||||..... ...+++...+++|+.|+.++++++.+. + .++||++||...+..
T Consensus 85 ----~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-- 158 (264)
T 2pd6_A 85 ----VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG-- 158 (264)
T ss_dssp ----HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC--
T ss_pred ----HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC--
Confidence 2221 145 9999999986432 123456779999999999999997653 4 469999999754321
Q ss_pred CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 126 FLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 126 ~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.+. .+++++++|||.++++.
T Consensus 159 ---------~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 202 (264)
T 2pd6_A 159 ---------N-VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPM 202 (264)
T ss_dssp ---------C-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC
T ss_pred ---------C-CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccc
Confidence 1 456899999999999999988773 28999999999999985
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.2e-12 Score=130.68 Aligned_cols=153 Identities=18% Similarity=0.042 Sum_probs=113.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .
T Consensus 32 lVTGas~GIG~aia~~l--a~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g 104 (283)
T 3v8b_A 32 LITGAGSGIGRATALAL--AADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRD-----LVLKFG 104 (283)
T ss_dssp EEESCSSHHHHHHHHHH--HHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHH-----HHHHHS
T ss_pred EEECCCCHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-----HHHHhC
Confidence 48999999999985532 2222333333332 6899999998886554 3332 2
Q ss_pred CCCEEEEcCcccCcc-----cCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|++|||||..... ...+++...+++|+.|+.++++++ ++.+.+++|++||...+.. .+.
T Consensus 105 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~---------~~~- 174 (283)
T 3v8b_A 105 HLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRT---------FTT- 174 (283)
T ss_dssp CCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB---------CCS-
T ss_pred CCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccC---------CCC-
Confidence 699999999986431 122456678999999999999998 5556679999999765421 022
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .+++++.++||.|..+.
T Consensus 175 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 217 (283)
T 3v8b_A 175 PGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNI 217 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCT
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCc
Confidence 456889999999999999999886 37999999999999885
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.2e-12 Score=130.16 Aligned_cols=150 Identities=12% Similarity=0.052 Sum_probs=111.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccc-c----------------------cccccCh----HHhhhHHhhhhccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEAR-R----------------------EGDIVSM----YANTDLAQKELGWS 60 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~-~----------------------~~Dl~~~----~~~~~~~~~~~~~~ 60 (600)
-|||++|.+|+.+++.. ...+.+++.++| + .+|+++. +++.+++++
T Consensus 15 lVTGas~gIG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~----- 87 (276)
T 1mxh_A 15 VITGGARRIGHSIAVRL--HQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC----- 87 (276)
T ss_dssp EETTCSSHHHHHHHHHH--HHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH-----
T ss_pred EEeCCCcHHHHHHHHHH--HHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH-----
Confidence 58999999999996532 223344444444 1 4799999 888775544
Q ss_pred cccc-CCCCEEEEcCcccCccc----CC-----------CChhhhHHhHHHHHHHHHHHHHHc---CC------CeEEEe
Q psy16545 61 ARCT-HDIDCVIHFAAVKAVGE----SM-----------QEPLMYYKNNLIATINLLEVMKSH---GV------YQLVFS 115 (600)
Q Consensus 61 ~~~~-~~~d~Vih~A~~~~~~~----~~-----------~~~~~~~~~Nv~gt~~ll~a~~~~---~~------~r~I~~ 115 (600)
+.+. .++|+||||||...... .. +++...+++|+.++.++++++.+. +. ++||++
T Consensus 88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i 167 (276)
T 1mxh_A 88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL 167 (276)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence 3222 26999999999764321 11 345578999999999999999774 33 699999
Q ss_pred cCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 116 SSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 116 SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
||...+.. . .+...|+.||.+.+.+++.++.++ .++++++++||.+++|
T Consensus 168 sS~~~~~~-----------~-~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~ 218 (276)
T 1mxh_A 168 CDAMTDLP-----------L-PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 218 (276)
T ss_dssp CCGGGGSC-----------C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred CchhhcCC-----------C-CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence 99876542 2 456899999999999999998775 2899999999999998
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.6e-12 Score=128.03 Aligned_cols=151 Identities=11% Similarity=-0.040 Sum_probs=112.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+++++.. ...+.+++..+|+ .+|++|.+++.+++++ +.+. .
T Consensus 10 lVTGas~gIG~aia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g 82 (257)
T 3imf_A 10 IITGGSSGMGKGMATRF--AKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQ-----IDEKFG 82 (257)
T ss_dssp EETTTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHH-----HHHHHS
T ss_pred EEECCCCHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-----HHHHcC
Confidence 48999999999985532 2223333333332 6899999998886554 3332 2
Q ss_pred CCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHH-----HHcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVM-----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~-----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|++|||||..... ...+++...+++|+.++.++++++ ++.+..++|++||...+.. .
T Consensus 83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~- 150 (257)
T 3imf_A 83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA-----------G- 150 (257)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC-----------C-
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC-----------C-
Confidence 699999999975432 123456779999999999999997 3334579999999865532 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhcC---CceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAHK---EWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~~---~~~~~ilR~~~v~G~~ 177 (600)
.....|+.||.+.+.+++.++.++. ++++++++||.|.++.
T Consensus 151 ~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~ 194 (257)
T 3imf_A 151 PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTG 194 (257)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCC
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCc
Confidence 4568899999999999999887641 8999999999999885
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=1e-13 Score=140.63 Aligned_cols=176 Identities=13% Similarity=0.101 Sum_probs=118.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
.|||++|++|+++.+.... .+.++++++|+ .+|+.|++++.+ +++
T Consensus 8 lVtGatG~iG~~l~~~L~~--~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~---------~~~- 75 (313)
T 1qyd_A 8 LIVGGTGYIGKRIVNASIS--LGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVD---------ALK- 75 (313)
T ss_dssp EEESTTSTTHHHHHHHHHH--TTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHH---------HHT-
T ss_pred EEEcCCcHHHHHHHHHHHh--CCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHH---------HHh-
Confidence 5899999999998553221 12222222222 679999998888 776
Q ss_pred CCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcC-CCeEEEecCccccCCCCCCCCCCCCCCCCC-CChH
Q psy16545 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVYGEPQFLPITEDHPTGNI-KNVY 142 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p-~s~Y 142 (600)
++|+|||+|+..... .|+.++.+++++|++.+ +++||+ | +||...... +.+. .| .+.|
T Consensus 76 -~~d~vi~~a~~~~~~-----------~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~-~p~~~~y 135 (313)
T 1qyd_A 76 -QVDVVISALAGGVLS-----------HHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHAL-QPGSITF 135 (313)
T ss_dssp -TCSEEEECCCCSSSS-----------TTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCC-SSTTHHH
T ss_pred -CCCEEEECCccccch-----------hhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCC-CCCcchH
Confidence 799999999875321 26778899999999998 999985 4 355322111 2233 33 4678
Q ss_pred HHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcc
Q psy16545 143 GKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTG 222 (600)
Q Consensus 143 ~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~ 222 (600)
.+|..+|++++. . +++++++||+.++|+.... +......... ..+.+.++++|.+.+++++
T Consensus 136 -~sK~~~e~~~~~----~-g~~~~ilrp~~~~~~~~~~------------~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~ 196 (313)
T 1qyd_A 136 -IDKRKVRRAIEA----A-SIPYTYVSSNMFAGYFAGS------------LAQLDGHMMP-PRDKVLIYGDGNVKGIWVD 196 (313)
T ss_dssp -HHHHHHHHHHHH----T-TCCBCEEECCEEHHHHTTT------------SSCTTCCSSC-CSSEECCBTTSCSEEEEEC
T ss_pred -HHHHHHHHHHHh----c-CCCeEEEEeceeccccccc------------cccccccccC-CCCeEEEeCCCCceEEEEE
Confidence 999999998864 2 8999999999998863110 0000000011 3346677899999999999
Q ss_pred eEEeeecccccc
Q psy16545 223 KVVAIDNFVNSV 234 (600)
Q Consensus 223 v~d~v~~~~~a~ 234 (600)
++|+++.+..++
T Consensus 197 ~~Dva~~~~~~l 208 (313)
T 1qyd_A 197 EDDVGTYTIKSI 208 (313)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 999887666553
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.39 E-value=1e-12 Score=128.12 Aligned_cols=150 Identities=13% Similarity=-0.000 Sum_probs=110.7
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEec-ccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVE-ARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~-~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
|||++|++|+.+.+.. ...+.+++.+ +|+ .+|+++.+++.+++++ +.+..
T Consensus 6 VTGasggiG~~la~~l--~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g 78 (244)
T 1edo_A 6 VTGASRGIGKAIALSL--GKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKT-----AIDAWG 78 (244)
T ss_dssp ETTCSSHHHHHHHHHH--HHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHH-----HHHHSS
T ss_pred EeCCCchHHHHHHHHH--HHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHH-----HHHHcC
Confidence 7999999999996532 2223333331 222 5799999988885544 32222
Q ss_pred CCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|+||||||..... ...+++...+++|+.++.++++++.+ .+.++||++||...+.. . .
T Consensus 79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~-~ 146 (244)
T 1edo_A 79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG-----------N-I 146 (244)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-----------C-T
T ss_pred CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCC-----------C-C
Confidence 699999999986432 12345667899999999999988865 36679999999855421 1 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+.|+.||.+.+.+++.++.+. .+++++++|||.++++.
T Consensus 147 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (244)
T 1edo_A 147 GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM 188 (244)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccch
Confidence 56899999999999999988774 38999999999999884
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.1e-12 Score=129.78 Aligned_cols=151 Identities=11% Similarity=-0.026 Sum_probs=113.1
Q ss_pred cCCCCc--chHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 8 LGTGQG--TSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 8 ~vtG~~--g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
-|||++ |.+|+++++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+..
T Consensus 13 lVTGas~~~gIG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~~ 85 (265)
T 1qsg_A 13 LVTGVASKLSIAYGIAQAM--HREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAE-----LGKVW 85 (265)
T ss_dssp EECCCCSTTSHHHHHHHHH--HHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHH-----HHTTC
T ss_pred EEECCCCCCCHHHHHHHHH--HHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHH-----HHHHc
Confidence 589998 89999996533 2233344433332 5799999988886654 33332
Q ss_pred -CCCEEEEcCcccCc--------c-cCCCChhhhHHhHHHHHHHHHHHHHHcC--CCeEEEecCccccCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAV--------G-ESMQEPLMYYKNNLIATINLLEVMKSHG--VYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 66 -~~d~Vih~A~~~~~--------~-~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
++|+||||||.... . ...+++...+++|+.++.++++++.+.- -+++|++||...+..
T Consensus 86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------- 155 (265)
T 1qsg_A 86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA---------- 155 (265)
T ss_dssp SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB----------
T ss_pred CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC----------
Confidence 59999999997642 1 2334567799999999999999997752 258999999765431
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.++ .++++++++||.|+++.
T Consensus 156 -~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 199 (265)
T 1qsg_A 156 -I-PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA 199 (265)
T ss_dssp -C-TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred -C-CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccch
Confidence 2 456789999999999999998775 38999999999999985
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.1e-12 Score=129.23 Aligned_cols=151 Identities=16% Similarity=0.041 Sum_probs=111.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccc-c---------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEAR-R---------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~-~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+++.+.. ...+.+++.++| + .+|+++.+++.+++++ +.+.
T Consensus 11 lITGasggiG~~~a~~l--~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 83 (261)
T 1gee_A 11 VITGSSTGLGKSMAIRF--ATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQS-----AIKEF 83 (261)
T ss_dssp EETTCSSHHHHHHHHHH--HHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH-----HHHHH
T ss_pred EEeCCCChHHHHHHHHH--HHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH-----HHHHc
Confidence 58999999999996532 223334444444 1 5799999888885544 3222
Q ss_pred CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHH----cC-CCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HG-VYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
.++|+||||||..... ...+++...+++|+.++.++++++.+ .+ .+++|++||...+. +.
T Consensus 84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~ 152 (261)
T 1gee_A 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-----------PW 152 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------CC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC-----------CC
Confidence 2699999999986432 12345667899999999999888654 34 57999999976542 23
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .+++++++|||.++++.
T Consensus 153 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 195 (261)
T 1gee_A 153 -PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI 195 (261)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGG
T ss_pred -CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCch
Confidence 567899999999999999888764 38999999999999984
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.39 E-value=9e-13 Score=128.99 Aligned_cols=151 Identities=10% Similarity=0.015 Sum_probs=114.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||++|.+|+++++. +...+.+++..+|+ .+|++|.+++.+++++ +.+. .++|
T Consensus 13 lVTGas~gIG~a~a~~--l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g~iD 85 (248)
T 3op4_A 13 LVTGASRGIGKAIAEL--LAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKA-----ITDEFGGVD 85 (248)
T ss_dssp EESSCSSHHHHHHHHH--HHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHH-----HHHHHCCCS
T ss_pred EEeCCCCHHHHHHHHH--HHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHH-----HHHHcCCCC
Confidence 5899999999999653 33334444444443 5799999998886554 3332 2699
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
++|||||...... ..+++...+++|+.|+.++++++.. .+..++|++||...+- +. .+.+
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~-~~~~ 153 (248)
T 3op4_A 86 ILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM-----------GN-AGQA 153 (248)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CC-TTCH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC-----------CC-CCCh
Confidence 9999999864322 3345677999999999999998743 4567999999976542 12 4668
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.|+.||.+.+.+++.++.++ .+++++.++||.+..+.
T Consensus 154 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 192 (248)
T 3op4_A 154 NYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM 192 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCch
Confidence 99999999999999998875 38999999999998875
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=8.8e-13 Score=129.72 Aligned_cols=150 Identities=15% Similarity=0.082 Sum_probs=112.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhccccccc-CCCCEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCT-HDIDCVI 71 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vi 71 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .++|+||
T Consensus 10 lVTGas~gIG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g~iD~lv 82 (256)
T 2d1y_A 10 LVTGGARGIGRAIAQAF--AREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEE-----AAYALGRVDVLV 82 (256)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHH-----HHHHHSCCCEEE
T ss_pred EEeCCCCHHHHHHHHHH--HHCCCEEEEEeCChhHHHHHHHhhCCEEEeeCCCHHHHHHHHHH-----HHHHcCCCCEEE
Confidence 48999999999996633 3334444444443 5799999988885544 3222 2699999
Q ss_pred EcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHH
Q psy16545 72 HFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYG 143 (600)
Q Consensus 72 h~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~ 143 (600)
||||...... ..+++...+++|+.++.++++++.. .+.+++|++||...+.. . ++.+.|+
T Consensus 83 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~-~~~~~Y~ 150 (256)
T 2d1y_A 83 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA-----------E-QENAAYN 150 (256)
T ss_dssp ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB-----------C-TTBHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCC-----------C-CCChhHH
Confidence 9999864322 1234567999999999999988753 45679999999865421 1 4567899
Q ss_pred HHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 144 KTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 144 ~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.||.+.+.+++.++.++ .++++++++||.+.++
T Consensus 151 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 185 (256)
T 2d1y_A 151 ASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE 185 (256)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCc
Confidence 99999999999998775 3899999999999876
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-12 Score=130.42 Aligned_cols=151 Identities=17% Similarity=0.054 Sum_probs=113.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------------------cccccChHHhhhHH
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------------------EGDIVSMYANTDLA 53 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------------------~~Dl~~~~~~~~~~ 53 (600)
-|||+++.+|+++++. +...+.+++.+||+ .+|++|.+++.+++
T Consensus 19 lVTGas~gIG~a~a~~--la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 96 (280)
T 3pgx_A 19 FITGAARGQGRSHAVR--LAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELV 96 (280)
T ss_dssp EEESTTSHHHHHHHHH--HHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred EEECCCcHHHHHHHHH--HHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence 4899999999999653 33334445544441 47999999988865
Q ss_pred hhhhccccccc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cC-CCeEEEecCccccCC
Q psy16545 54 QKELGWSARCT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG-VYQLVFSSSCTVYGE 123 (600)
Q Consensus 54 ~~~~~~~~~~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~r~I~~SS~~vyg~ 123 (600)
++ +.+. .++|++|||||...... ..+++...+++|+.++.++++++.. .+ ..++|++||...+..
T Consensus 97 ~~-----~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 171 (280)
T 3pgx_A 97 AD-----GMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA 171 (280)
T ss_dssp HH-----HHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred HH-----HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC
Confidence 54 3332 26999999999875322 2345667899999999999998743 33 468999999866532
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 124 PQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 124 ~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. ...+.|+.||.+.+.+++.++.++ .++++++++||.|.+|.
T Consensus 172 -----------~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 215 (280)
T 3pgx_A 172 -----------T-PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPM 215 (280)
T ss_dssp -----------C-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred -----------C-CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcc
Confidence 2 456889999999999999998874 28999999999999985
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.38 E-value=9.8e-13 Score=129.99 Aligned_cols=153 Identities=13% Similarity=0.049 Sum_probs=112.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+++++... ..+.+++.++++ .+|++|.+++.+++++ +.+.
T Consensus 11 lVTGas~gIG~~~a~~l~--~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~-----~~~~~ 83 (264)
T 3i4f_A 11 LITAGTKGLGKQVTEKLL--AKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEE-----AMSHF 83 (264)
T ss_dssp EETTTTSHHHHHHHHHHH--HTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHH-----HHHHH
T ss_pred EEeCCCchhHHHHHHHHH--HCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH-----HHHHh
Confidence 489999999999955322 223333332221 6899999998885554 3322
Q ss_pred CCCCEEEEcCccc--Cc----ccCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVK--AV----GESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 65 ~~~d~Vih~A~~~--~~----~~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
.++|+||||||.. .. ....+++...+++|+.++.++++++ ++.+..++|++||...++.. +
T Consensus 84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~ 154 (264)
T 3i4f_A 84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP---------G 154 (264)
T ss_dssp SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC---------C
T ss_pred CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC---------C
Confidence 2699999999942 11 1123456678999999999999998 55666799999998554321 2
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.+. .++++++++||.|+++.
T Consensus 155 ~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 198 (264)
T 3i4f_A 155 W-IYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEM 198 (264)
T ss_dssp C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGG
T ss_pred C-CCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCcc
Confidence 2 456899999999999999998774 28999999999999985
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.38 E-value=9.5e-13 Score=128.75 Aligned_cols=150 Identities=11% Similarity=0.019 Sum_probs=111.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------cccccChHHhhhHHhhhhccccccc-CCCCEEEEcCcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFAAV 76 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~ 76 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .++|+||||||.
T Consensus 19 lVTGas~gIG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g~id~lv~~Ag~ 91 (247)
T 1uzm_A 19 LVTGGNRGIGLAIAQRL--AADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTA-----VEEHQGPVEVLVSNAGL 91 (247)
T ss_dssp EETTTTSHHHHHHHHHH--HHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHH-----HHHHHSSCSEEEEECSC
T ss_pred EEeCCCCHHHHHHHHHH--HHCCCEEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHH-----HHHHcCCCCEEEECCCC
Confidence 58999999999996633 3344555555554 4799999988885554 3222 268999999998
Q ss_pred cCcc----cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q psy16545 77 KAVG----ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHF 148 (600)
Q Consensus 77 ~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~ 148 (600)
.... ...+++...+++|+.++.++++++. +.+.+++|++||...+.. . .+.+.|+.||.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~~~Y~~sK~a 159 (247)
T 1uzm_A 92 SADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG-----------I-GNQANYAASKAG 159 (247)
T ss_dssp CC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------CCHHHHHHHHH
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccC-----------C-CCChhHHHHHHH
Confidence 6432 2234567799999999999999875 356679999999754321 1 356789999999
Q ss_pred HHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 149 IEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 149 ~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+.+++.++.++ .++++++++||.+.++
T Consensus 160 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 189 (247)
T 1uzm_A 160 VIGMARSIARELSKANVTANVVAPGYIDTD 189 (247)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHhhhcCcEEEEEEeCCCccc
Confidence 999999998774 3899999999999876
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.38 E-value=1e-12 Score=128.17 Aligned_cols=149 Identities=11% Similarity=0.024 Sum_probs=107.9
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEec-cc----------------------ccccccChHHhhhHHhhhhccccccc-
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVE-AR----------------------REGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~-~~----------------------~~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
|||++|.+|+++.+.. ...+.+++.+ +| -.+|++|.+++.+++++ +.+.
T Consensus 6 ITGasggiG~~~a~~l--~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 78 (245)
T 2ph3_A 6 ITGASRGIGRAIALRL--AEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQ-----AAEVL 78 (245)
T ss_dssp ETTTTSHHHHHHHHHH--HTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHH-----HHHHH
T ss_pred EeCCCchHHHHHHHHH--HHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH-----HHHhc
Confidence 7999999999996532 2233333332 22 15799999888885543 2221
Q ss_pred CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCcccc-CCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVY-GEPQFLPITEDHPT 135 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vy-g~~~~~~~~E~~~~ 135 (600)
.++|+||||||..... ...+++...+++|+.++.++++++ ++.+.++||++||...+ +.
T Consensus 79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------ 146 (245)
T 2ph3_A 79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN------------ 146 (245)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC------------
Confidence 2699999999986432 123456678999999966666554 55677899999997543 32
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.+. .+++++++|||.++++.
T Consensus 147 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 189 (245)
T 2ph3_A 147 -PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEM 189 (245)
T ss_dssp -SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcc
Confidence 345789999999999999988765 28999999999999884
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-12 Score=130.51 Aligned_cols=151 Identities=15% Similarity=0.065 Sum_probs=111.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+.+++... ..+.+++.++++ .+|+++.+++.+++++ +.+.
T Consensus 33 lVTGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 105 (283)
T 1g0o_A 33 LVTGAGRGIGREMAMELG--RRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEE-----AVKIF 105 (283)
T ss_dssp EETTTTSHHHHHHHHHHH--HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEeCCCcHHHHHHHHHHH--HCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHH-----HHHHc
Confidence 589999999999855322 222233322221 5799999888875544 3222
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
.++|+||||||...... ..+++...+++|+.|+.++++++.+. +.+++|++||...+.. .. .+
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------~~-~~ 174 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK----------AV-PK 174 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS----------SC-SS
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccC----------CC-CC
Confidence 26999999999864321 23456779999999999999999875 5579999999765431 11 23
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+.|+.||.+.+.+++.++.++ .++++++++||.+.++
T Consensus 175 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 214 (283)
T 1g0o_A 175 HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD 214 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccch
Confidence 6889999999999999998764 3899999999999987
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1e-12 Score=130.85 Aligned_cols=151 Identities=15% Similarity=0.022 Sum_probs=111.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||++|.+|+.+++... ..+.+++.++|+ .+|++|.+++.+++++ +.+..
T Consensus 26 lVTGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g 98 (277)
T 2rhc_B 26 LVTGATSGIGLEIARRLG--KEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA-----VVERYG 98 (277)
T ss_dssp EEETCSSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHTC
T ss_pred EEECCCCHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH-----HHHHhC
Confidence 589999999999855322 222333333332 6899999988885554 33332
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc------CCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH------GVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~------~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
++|+||||||...... ..+++...+++|+.|+.++++++.+. +.++||++||...+. +.
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~ 167 (277)
T 2rhc_B 99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ-----------GV 167 (277)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS-----------CC
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc-----------CC
Confidence 5999999999764321 22345679999999999999997554 557999999986542 12
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .++++++++||.+.++.
T Consensus 168 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 210 (277)
T 2rhc_B 168 -VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPM 210 (277)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHH
T ss_pred -CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCch
Confidence 456889999999999999998775 37999999999999873
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.2e-12 Score=129.32 Aligned_cols=151 Identities=13% Similarity=-0.005 Sum_probs=111.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d 68 (600)
-|||++|.+|+++.+.. ...+.+++.++|+ .+|++|.+++.+++++ +.+.. ++|
T Consensus 16 lVTGas~gIG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~-----~~~~~g~iD 88 (263)
T 3ak4_A 16 IVTGGSKGIGAAIARAL--DKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQK-----AIDALGGFD 88 (263)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHH-----HHHHHTCCC
T ss_pred EEeCCCChHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-----HHHHcCCCC
Confidence 58999999999996532 2223333333332 5899999988885544 33222 699
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cC-CCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG-VYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
+||||||...... ..+++...+++|+.++.++++++.+ .+ .+++|++||...+.. . ++.
T Consensus 89 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~ 156 (263)
T 3ak4_A 89 LLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG-----------A-PLL 156 (263)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----------C-TTC
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC-----------C-CCc
Confidence 9999999764321 2245667999999999999988754 34 579999999865431 2 456
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.|+.||.+.+.+++.++.++ .+++++++|||.++++.
T Consensus 157 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 196 (263)
T 3ak4_A 157 AHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAM 196 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChh
Confidence 799999999999999998775 38999999999999883
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-12 Score=131.29 Aligned_cols=151 Identities=16% Similarity=0.052 Sum_probs=113.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|.+|+++++.. ...+.+++..++. .+|++|.+++.+++++ +.+.
T Consensus 53 lVTGas~GIG~aia~~l--a~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~ 125 (294)
T 3r3s_A 53 LVTGGDSGIGRAAAIAY--AREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHK-----AREA 125 (294)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHH-----HHHH
T ss_pred EEeCCCcHHHHHHHHHH--HHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHH-----HHHH
Confidence 58999999999996532 2233333333322 5799999998886554 3332
Q ss_pred -CCCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHHcCC--CeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSHGV--YQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|++|||||...... ..+++...+++|+.|+.++++++...-. .+||++||...+.. .
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~-----------~- 193 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQP-----------S- 193 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSC-----------C-
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccC-----------C-
Confidence 26999999999754211 2345677999999999999999977533 49999999877652 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .|+++++++||.|.++.
T Consensus 194 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 236 (294)
T 3r3s_A 194 PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccc
Confidence 456889999999999999998875 38999999999999874
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.1e-12 Score=128.69 Aligned_cols=150 Identities=14% Similarity=0.032 Sum_probs=115.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccccc---------ccccChHHhhhHHhhhhcccccccC-CCCEEEEcCccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE---------GDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAAVK 77 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~---------~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~ 77 (600)
-|||++|.+|+.+++ .+...+.+++.++|+. +|++|.+++.+++++ +.+.. ++|+||||||..
T Consensus 26 lITGas~gIG~~la~--~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~-----~~~~~g~iD~li~~Ag~~ 98 (251)
T 3orf_A 26 LVLGGSGALGAEVVK--FFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEK-----INSKSIKVDTFVCAAGGW 98 (251)
T ss_dssp EEETTTSHHHHHHHH--HHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHH-----HHTTTCCEEEEEECCCCC
T ss_pred EEECCCCHHHHHHHH--HHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHH-----HHHHcCCCCEEEECCccC
Confidence 589999999999966 4444456666667663 789999998886665 43322 589999999976
Q ss_pred Cccc-----CCCChhhhHHhHHHHHHHHHHHHHHcC--CCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q psy16545 78 AVGE-----SMQEPLMYYKNNLIATINLLEVMKSHG--VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIE 150 (600)
Q Consensus 78 ~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e 150 (600)
.... ..+++...+++|+.|+.++++++...- -.++|++||...+. +. .+.+.|+.||.+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~-~~~~~Y~~sKaa~~ 166 (251)
T 3orf_A 99 SGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN-----------RT-SGMIAYGATKAATH 166 (251)
T ss_dssp CCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CC-TTBHHHHHHHHHHH
T ss_pred CCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc-----------CC-CCCchhHHHHHHHH
Confidence 4322 234566789999999999999997742 24899999986653 22 45689999999999
Q ss_pred HHHHHHHhhc----CCceEEEEecccccCC
Q psy16545 151 EMLKDLSKAH----KEWNIISLRYFNPVGA 176 (600)
Q Consensus 151 ~~~~~~~~~~----~~~~~~ilR~~~v~G~ 176 (600)
.+++.++.++ .++++++++||.|.++
T Consensus 167 ~~~~~la~e~~~~~~gi~v~~v~PG~v~t~ 196 (251)
T 3orf_A 167 HIIKDLASENGGLPAGSTSLGILPVTLDTP 196 (251)
T ss_dssp HHHHHHTSTTSSSCTTCEEEEEEESCBCCH
T ss_pred HHHHHHHHHhcccCCCcEEEEEecCcCcCc
Confidence 9999999883 4899999999999876
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1e-12 Score=129.81 Aligned_cols=151 Identities=11% Similarity=0.080 Sum_probs=112.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .++|
T Consensus 16 lVTGasggiG~~~a~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~~g~id 88 (265)
T 2o23_A 16 VITGGASGLGLATAERL--VGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALAL-----AKGKFGRVD 88 (265)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHH-----HHHHHSCCC
T ss_pred EEECCCChHHHHHHHHH--HHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHH-----HHHHCCCCC
Confidence 58999999999996532 2223333333332 5899999988885544 3222 2699
Q ss_pred EEEEcCcccCcc----------cCCCChhhhHHhHHHHHHHHHHHHHHc----------CCCeEEEecCccccCCCCCCC
Q psy16545 69 CVIHFAAVKAVG----------ESMQEPLMYYKNNLIATINLLEVMKSH----------GVYQLVFSSSCTVYGEPQFLP 128 (600)
Q Consensus 69 ~Vih~A~~~~~~----------~~~~~~~~~~~~Nv~gt~~ll~a~~~~----------~~~r~I~~SS~~vyg~~~~~~ 128 (600)
+||||||..... ...+++...+++|+.++.++++++.+. +.+++|++||...+..
T Consensus 89 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----- 163 (265)
T 2o23_A 89 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG----- 163 (265)
T ss_dssp EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC-----
T ss_pred EEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC-----
Confidence 999999986432 123456679999999999999998754 5678999999876542
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 129 ITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 129 ~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.+. .++++++++||.+.++.
T Consensus 164 ------~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 207 (265)
T 2o23_A 164 ------Q-VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 207 (265)
T ss_dssp ------C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-
T ss_pred ------C-CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcc
Confidence 2 456899999999999999988774 38999999999998874
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.38 E-value=2e-12 Score=126.61 Aligned_cols=148 Identities=14% Similarity=0.021 Sum_probs=105.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccCCCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTHDIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~ 69 (600)
-|||++|.+|+++++.. ...+.+++..+|+ .+|+++.+++.+++++ . .++|+
T Consensus 18 lVTGas~gIG~~~a~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~---~~id~ 87 (249)
T 3f9i_A 18 LITGASSGIGSAIARLL--HKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISK-----T---SNLDI 87 (249)
T ss_dssp EETTTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHT-----C---SCCSE
T ss_pred EEECCCChHHHHHHHHH--HHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHh-----c---CCCCE
Confidence 48999999999996532 2333444444443 5899999988883332 1 26999
Q ss_pred EEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 70 VIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 70 Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
||||||..... ...+++...+++|+.++.++++++. +.+.++||++||...+.. . .+.+.
T Consensus 88 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~~~ 155 (249)
T 3f9i_A 88 LVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAG-----------N-PGQAN 155 (249)
T ss_dssp EEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--C-----------C-SCSHH
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccC-----------C-CCCch
Confidence 99999986432 2346778899999999999988874 345579999999866532 2 45688
Q ss_pred HHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 142 YGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
|+.||.+.+.+++.++.++ .++++++++||.|.++.
T Consensus 156 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 193 (249)
T 3f9i_A 156 YCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDM 193 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC---
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCc
Confidence 9999999999999998774 38999999999999885
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-12 Score=126.64 Aligned_cols=151 Identities=12% Similarity=0.015 Sum_probs=105.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------cccccChHHhhhHHhhhhccccccc-CCCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------EGDIVSMYANTDLAQKELGWSARCT-HDIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~ 69 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .++|+
T Consensus 9 lVtGasggiG~~~a~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~id~ 81 (234)
T 2ehd_A 9 LITGASRGIGEATARLL--HAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAA-----MEEAFGELSA 81 (234)
T ss_dssp EESSTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHH-----HHHHHSCCCE
T ss_pred EEECCCcHHHHHHHHHH--HHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHH-----HHHHcCCCCE
Confidence 48999999999996532 2223334333332 5799999988875443 2221 26999
Q ss_pred EEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 70 VIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 70 Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
|||+||...... ..+++...+++|+.++.++++++ ++.+.+++|++||...+.. . .+.+.
T Consensus 82 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~-~~~~~ 149 (234)
T 2ehd_A 82 LVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNP-----------F-KGGAA 149 (234)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSC-----------C-TTCHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCC-----------C-CCCch
Confidence 999999764321 23456679999999998776654 4556789999999876542 2 45689
Q ss_pred HHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 142 YGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
|+.||.+.+.+++.++.+. .+++++++|||.+..+.
T Consensus 150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 187 (234)
T 2ehd_A 150 YNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGF 187 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------
T ss_pred hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence 9999999999998887764 38999999999998763
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.38 E-value=9.5e-13 Score=126.51 Aligned_cols=122 Identities=8% Similarity=-0.018 Sum_probs=89.8
Q ss_pred HHhhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Q psy16545 246 IEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSS 325 (600)
Q Consensus 246 ~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~S 325 (600)
...+...+++++.+|+.+.+. +.+. ++|+|||+|+..... .....|+.++.+++++|++.+ +|||++|
T Consensus 37 ~~~~~~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~ag~~~~~-------~~~~~n~~~~~~l~~a~~~~~-~~~v~~S 104 (224)
T 3h2s_A 37 AADRLGATVATLVKEPLVLTE--ADLD--SVDAVVDALSVPWGS-------GRGYLHLDFATHLVSLLRNSD-TLAVFIL 104 (224)
T ss_dssp HHHHTCTTSEEEECCGGGCCH--HHHT--TCSEEEECCCCCTTS-------SCTHHHHHHHHHHHHTCTTCC-CEEEEEC
T ss_pred cccccCCCceEEecccccccH--hhcc--cCCEEEECCccCCCc-------chhhHHHHHHHHHHHHHHHcC-CcEEEEe
Confidence 344445689999999999887 6666 899999999975111 124679999999999999999 9999999
Q ss_pred Cccccc-CCCC--CCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeeccc
Q psy16545 326 SCTVYG-EPQF--LPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL 384 (600)
Q Consensus 326 S~~vYg-~~~~--~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~ 384 (600)
|.+.+. .... .+.+|+....|. +.|+.+| ...|. ++.+.+..+++++++||+.+
T Consensus 105 S~~~~~~~~~~~~~~~~~~~~~~~~-~~y~~sK---~~~e~-~~~~~~~~~i~~~ivrp~~v 161 (224)
T 3h2s_A 105 GSASLAMPGADHPMILDFPESAASQ-PWYDGAL---YQYYE-YQFLQMNANVNWIGISPSEA 161 (224)
T ss_dssp CGGGSBCTTCSSCGGGGCCGGGGGS-TTHHHHH---HHHHH-HHHHTTCTTSCEEEEEECSB
T ss_pred cceeeccCCCCccccccCCCCCccc-hhhHHHH---HHHHH-HHHHHhcCCCcEEEEcCccc
Confidence 986544 3322 244454443333 7899999 66673 45555567999999999873
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.38 E-value=2.3e-12 Score=129.72 Aligned_cols=192 Identities=13% Similarity=-0.036 Sum_probs=131.8
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
..+++++.+|+.|++++.++++ ++|+|||+++.... . ....|+.++.+++++|++.+++|||++||..+|
T Consensus 50 ~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~~~~---~-----~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~ 119 (299)
T 2wm3_A 50 LQGAEVVQGDQDDQVIMELALN--GAYATFIVTNYWES---C-----SQEQEVKQGKLLADLARRLGLHYVVYSGLENIK 119 (299)
T ss_dssp HTTCEEEECCTTCHHHHHHHHT--TCSEEEECCCHHHH---T-----CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHH
T ss_pred HCCCEEEEecCCCHHHHHHHHh--cCCEEEEeCCCCcc---c-----cchHHHHHHHHHHHHHHHcCCCEEEEEcCcccc
Confidence 3568999999999999999998 79999999875311 0 135678899999999999999999999998888
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCCCCcce
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKPVPY 410 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~ 410 (600)
+... +. + ...|+.+| ...|.+++. .+++++++||+.+.
T Consensus 120 ~~~~------~~---~-~~~y~~sK---~~~e~~~~~----~gi~~~ilrp~~~~------------------------- 157 (299)
T 2wm3_A 120 KLTA------GR---L-AAAHFDGK---GEVEEYFRD----IGVPMTSVRLPCYF------------------------- 157 (299)
T ss_dssp HHTT------TS---C-CCHHHHHH---HHHHHHHHH----HTCCEEEEECCEEG-------------------------
T ss_pred ccCC------Cc---c-cCchhhHH---HHHHHHHHH----CCCCEEEEeecHHh-------------------------
Confidence 6422 11 2 26799999 667887764 58999999987631
Q ss_pred EEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhh
Q psy16545 411 IFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF 490 (600)
Q Consensus 411 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f 490 (600)
|+.. ....+... . .+++..+. ...+++. ++|
T Consensus 158 -----~~~~---------------~~~~~~~~---~-----------------~g~~~~~~---~~~~~~~------~~~ 188 (299)
T 2wm3_A 158 -----ENLL---------------SHFLPQKA---P-----------------DGKSYLLS---LPTGDVP------MDG 188 (299)
T ss_dssp -----GGGG---------------TTTCCEEC---T-----------------TSSSEEEC---CCCTTSC------EEE
T ss_pred -----hhch---------------hhcCCccc---C-----------------CCCEEEEE---ecCCCCc------cce
Confidence 1100 00000000 0 01110110 1113332 677
Q ss_pred hhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC--CceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccC
Q psy16545 491 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP--VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEA 564 (600)
Q Consensus 491 i~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~--~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 564 (600)
+| ++|+++++..++..+ ..+++||+++ +.+|+.|+++.+.+.+|.++.+...+
T Consensus 189 i~--------------------~~Dva~~~~~~l~~~~~~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~~~~~~ 243 (299)
T 2wm3_A 189 MS--------------------VSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAEEYAALLTKHTRKVVHDAKMT 243 (299)
T ss_dssp EC--------------------GGGHHHHHHHHHHSHHHHTTCEEECCS-EEECHHHHHHHHHHHHSSCEEECCCC
T ss_pred ec--------------------HHHHHHHHHHHHcChhhhCCeEEEeee-ccCCHHHHHHHHHHHHCCCceeEecC
Confidence 77 777777777776543 2478999985 68999999999999999876655444
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=9.4e-13 Score=128.70 Aligned_cols=150 Identities=16% Similarity=0.023 Sum_probs=108.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|++|+++.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+.
T Consensus 11 lVtGasggiG~~la~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 83 (248)
T 2pnf_A 11 LVTGSTRGIGRAIAEKLA--SAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEE-----IYNLV 83 (248)
T ss_dssp EETTCSSHHHHHHHHHHH--HTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHH-----HHHHS
T ss_pred EEECCCchHHHHHHHHHH--HCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHH-----HHHhc
Confidence 589999999999955322 122222222221 6799999988885544 3222
Q ss_pred CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccc-cCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTV-YGEPQFLPITEDHPT 135 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~v-yg~~~~~~~~E~~~~ 135 (600)
.++|+||||||..... ...+++...+++|+.++.++++++ ++.+.+++|++||... ++.
T Consensus 84 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------ 151 (248)
T 2pnf_A 84 DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN------------ 151 (248)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC------------
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC------------
Confidence 2699999999986432 123456678999999998777665 4556789999999754 332
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+...|+.||.+.+.+++.++.+. .+++++++|||.++++.
T Consensus 152 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~ 194 (248)
T 2pnf_A 152 -VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDM 194 (248)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCch
Confidence 356789999999999999988764 38999999999999884
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=2.7e-12 Score=126.94 Aligned_cols=154 Identities=17% Similarity=0.044 Sum_probs=112.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCC---ccEEecccc--------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKP---VPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~---~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|.+|+.+++.. ...+ .+++.++|+ .+|+++.+++.+++++ +.+.
T Consensus 25 lITGasggIG~~la~~L--~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~-----~~~~ 97 (267)
T 1sny_A 25 LITGCNRGLGLGLVKAL--LNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVAD-----IEGV 97 (267)
T ss_dssp EESCCSSHHHHHHHHHH--HTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHH-----HHHH
T ss_pred EEECCCCcHHHHHHHHH--HhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHH-----HHHh
Confidence 58999999999996633 2223 344444433 5799999888885543 2222
Q ss_pred C---CCCEEEEcCcccC-c----ccCCCChhhhHHhHHHHHHHHHHHHHHc----------C-----CCeEEEecCcccc
Q psy16545 65 H---DIDCVIHFAAVKA-V----GESMQEPLMYYKNNLIATINLLEVMKSH----------G-----VYQLVFSSSCTVY 121 (600)
Q Consensus 65 ~---~~d~Vih~A~~~~-~----~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----------~-----~~r~I~~SS~~vy 121 (600)
. ++|+||||||... . ....+++...+++|+.++.++++++.+. + .++||++||...+
T Consensus 98 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 177 (267)
T 1sny_A 98 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS 177 (267)
T ss_dssp HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred cCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccccc
Confidence 1 5999999999865 1 1223456678999999999999988543 2 4689999998776
Q ss_pred CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 122 GEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 122 g~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.... +. .+.+.|+.||.+.+.+++.++.+. .+++++++|||.|..+.
T Consensus 178 ~~~~--------~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 226 (267)
T 1sny_A 178 IQGN--------TD-GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM 226 (267)
T ss_dssp STTC--------CS-CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred ccCC--------CC-CCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCC
Confidence 4311 12 356789999999999999988774 28999999999998875
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=1.8e-12 Score=126.63 Aligned_cols=150 Identities=11% Similarity=0.033 Sum_probs=111.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHHhhhHHhhhhccccccc-CCCCEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYANTDLAQKELGWSARCT-HDIDCV 70 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~V 70 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .++|+|
T Consensus 9 lVTGas~giG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g~id~l 81 (245)
T 1uls_A 9 LITGAAHGIGRATLELF--AKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAE-----ALAHLGRLDGV 81 (245)
T ss_dssp EEESTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHH-----HHHHHSSCCEE
T ss_pred EEECCCCHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHH-----HHHHcCCCCEE
Confidence 48999999999996533 2233344433432 5799999988885544 3322 259999
Q ss_pred EEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChH
Q psy16545 71 IHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVY 142 (600)
Q Consensus 71 ih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y 142 (600)
|||||...... ..+++...+++|+.++.++++++.+ .+.+++|++||...++. .+...|
T Consensus 82 vn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-------------~~~~~Y 148 (245)
T 1uls_A 82 VHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN-------------LGQANY 148 (245)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC-------------TTCHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCC-------------CCchhH
Confidence 99999764321 2245667899999999999988754 35679999999874432 345789
Q ss_pred HHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 143 GKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 143 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.||.+.+.+++.++.++ .++++++++||.+..+.
T Consensus 149 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 185 (245)
T 1uls_A 149 AASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRM 185 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcc
Confidence 999999999999988775 38999999999998874
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=9.4e-13 Score=129.29 Aligned_cols=150 Identities=12% Similarity=0.047 Sum_probs=110.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .++|
T Consensus 10 lVTGas~giG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~~g~id 82 (253)
T 1hxh_A 10 LVTGGASGVGLEVVKLL--LGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAA-----VQRRLGTLN 82 (253)
T ss_dssp EETTTTSHHHHHHHHHH--HHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHH-----HHHHHCSCC
T ss_pred EEeCCCcHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHH-----HHHHcCCCC
Confidence 48999999999996532 2223333333332 5899999988885544 3222 2589
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+||||||...... ..+++...+++|+.++.++++++ ++.+ +++|++||...+.. . .+.+
T Consensus 83 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-----------~-~~~~ 149 (253)
T 1hxh_A 83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLP-----------I-EQYA 149 (253)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSC-----------C-TTBH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCC-----------C-CCCc
Confidence 9999999864321 23456678999999988887765 3446 79999999876542 2 4567
Q ss_pred hHHHHHHHHHHHHHHHHhhc--C--CceEEEEecccccCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--K--EWNIISLRYFNPVGAH 177 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~--~~~~~ilR~~~v~G~~ 177 (600)
.|+.||.+.+.+++.++.++ . +++++++|||.+++|.
T Consensus 150 ~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~ 190 (253)
T 1hxh_A 150 GYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM 190 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH
T ss_pred cHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCch
Confidence 89999999999999988764 2 7999999999999984
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.2e-12 Score=127.99 Aligned_cols=151 Identities=11% Similarity=0.000 Sum_probs=113.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||++|.+|+.+++.. ...+.+++..+|+ .+|++|.+++.+++++ +.+..
T Consensus 30 lVTGas~gIG~aia~~l--a~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g 102 (271)
T 4ibo_A 30 LVTGSSRGLGRAMAEGL--AVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFAR-----LDEQGI 102 (271)
T ss_dssp EETTCSSHHHHHHHHHH--HHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH-----HHHHTC
T ss_pred EEeCCCcHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH-----HHHHCC
Confidence 58999999999996532 2233344444432 5899999998886654 33332
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|+||||||...... ..+++...+++|+.|+.++++++.. .+..++|++||...+. +. .
T Consensus 103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~-----------~~-~ 170 (271)
T 4ibo_A 103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL-----------AR-A 170 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------BC-T
T ss_pred CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC-----------CC-C
Confidence 6999999999864322 3345677999999999999887644 3557999999976542 22 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+.|+.||.+.+.+++.++.++ .+++++.++||.|.++.
T Consensus 171 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 212 (271)
T 4ibo_A 171 TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDM 212 (271)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcc
Confidence 66899999999999999998875 28999999999999884
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=128.24 Aligned_cols=151 Identities=15% Similarity=0.005 Sum_probs=112.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEec-ccc---------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVE-ARR---------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~-~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+++++.. ...+.+++.. +++ .+|++|.+++.+++++ +.+.
T Consensus 8 lVTGas~gIG~aia~~l--~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~ 80 (258)
T 3oid_A 8 LVTGSSRGVGKAAAIRL--AENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQ-----IDETF 80 (258)
T ss_dssp EESSCSSHHHHHHHHHH--HHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEecCCchHHHHHHHHH--HHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH-----HHHHc
Confidence 48999999999995532 2233333322 222 5899999998886554 3322
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+||||||...... ..+++...+++|+.|+.++++++. +.+..++|++||...+. +.
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~- 148 (258)
T 3oid_A 81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR-----------YL- 148 (258)
T ss_dssp SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTS-----------BC-
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCC-----------CC-
Confidence 26999999999754321 234566789999999999999874 44557999999986553 22
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .+++++.++||.+.++.
T Consensus 149 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 191 (258)
T 3oid_A 149 ENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDA 191 (258)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGG
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChh
Confidence 466899999999999999999876 28999999999999884
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.4e-12 Score=129.91 Aligned_cols=150 Identities=13% Similarity=-0.005 Sum_probs=112.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .
T Consensus 28 lVTGas~GIG~aia~~l--a~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g 100 (279)
T 3sju_A 28 FVTGVSSGIGLAVARTL--AARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAA-----AVERFG 100 (279)
T ss_dssp EEESTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH-----HHHHHC
T ss_pred EEeCCCCHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-----HHHHcC
Confidence 48999999999985532 2223333333332 5899999998886554 3332 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH------cCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS------HGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~------~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
++|+||||||...... ..+++...+++|+.|+.++++++.. .+..++|++||...+. +.
T Consensus 101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~-----------~~ 169 (279)
T 3sju_A 101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ-----------GV 169 (279)
T ss_dssp SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS-----------CC
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc-----------CC
Confidence 6999999999864322 2244667889999999999998754 4557999999986553 22
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+.+.|+.||.+.+.+++.++.++ .++++++++||.|.++
T Consensus 170 -~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 211 (279)
T 3sju_A 170 -MYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETP 211 (279)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSH
T ss_pred -CCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccch
Confidence 456889999999999999999875 3899999999999887
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=127.25 Aligned_cols=149 Identities=12% Similarity=0.042 Sum_probs=100.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEec-ccc---------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVE-ARR---------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~-~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+.+.+... ..+.+++.+ +++ .+|++|.+++.+++++ +.+.
T Consensus 9 lItGasggiG~~~a~~l~--~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 81 (247)
T 2hq1_A 9 IVTGSSRGLGKAIAWKLG--NMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKT-----AMDAF 81 (247)
T ss_dssp EESSCSSHHHHHHHHHHH--HTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHH-----HHHHH
T ss_pred EEECCCchHHHHHHHHHH--HCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-----HHHhc
Confidence 589999999999965322 222333333 111 5799999988885543 2221
Q ss_pred CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCc-cccCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSC-TVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~-~vyg~~~~~~~~E~~~~ 135 (600)
.++|+||||||..... ...+++...+++|+.++.++++++.+ .+.++||++||. +.++.
T Consensus 82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------ 149 (247)
T 2hq1_A 82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN------------ 149 (247)
T ss_dssp SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------------
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC------------
Confidence 2699999999986432 23456778999999999999888753 466799999997 44442
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+.++|+.||.+.+.+++.++.++ .++++++++||.+.++
T Consensus 150 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 191 (247)
T 2hq1_A 150 -AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTD 191 (247)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred -CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEecc
Confidence 356899999999999999988765 3899999999999876
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.8e-12 Score=130.59 Aligned_cols=151 Identities=14% Similarity=0.034 Sum_probs=113.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------------------cccccChHHhhhHHh
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------------------EGDIVSMYANTDLAQ 54 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------------~~Dl~~~~~~~~~~~ 54 (600)
-|||+++.+|+.+++. +...+..++.+|++ .+|++|.+++.++++
T Consensus 32 lVTGas~GIG~aia~~--la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 109 (299)
T 3t7c_A 32 FITGAARGQGRSHAIT--LAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVD 109 (299)
T ss_dssp EEESTTSHHHHHHHHH--HHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHH--HHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence 4899999999998653 33334444443332 589999999888665
Q ss_pred hhhccccccc-CCCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHHc-----CCCeEEEecCccccCC
Q psy16545 55 KELGWSARCT-HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSH-----GVYQLVFSSSCTVYGE 123 (600)
Q Consensus 55 ~~~~~~~~~~-~~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~-----~~~r~I~~SS~~vyg~ 123 (600)
+ +.+. .++|++|||||...... ..+++...+++|+.|+.++++++... +..+||++||...+..
T Consensus 110 ~-----~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~ 184 (299)
T 3t7c_A 110 D-----GVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG 184 (299)
T ss_dssp H-----HHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC
T ss_pred H-----HHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC
Confidence 4 3332 26999999999865432 23456779999999999999987442 2468999999865532
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 124 PQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 124 ~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. ...+.|+.||.+.+.+++.++.++ .|++++.++||.|.++.
T Consensus 185 -----------~-~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 228 (299)
T 3t7c_A 185 -----------A-ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPM 228 (299)
T ss_dssp -----------C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTT
T ss_pred -----------C-CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCcc
Confidence 2 456899999999999999998876 28999999999999985
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.6e-12 Score=129.64 Aligned_cols=151 Identities=13% Similarity=0.038 Sum_probs=110.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------------cccccChHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------------EGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------------~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
-|||++|.+|+.+++... ..+.+++.++|+ .+|++|.+++.+++++ +.+
T Consensus 10 lVTGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~ 82 (280)
T 1xkq_A 10 IITGSSNGIGRTTAILFA--QEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINS-----TLK 82 (280)
T ss_dssp EETTCSSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHH-----HHH
T ss_pred EEECCCChHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHH-----HHH
Confidence 589999999999854322 122222222221 6899999988885554 333
Q ss_pred cC-CCCEEEEcCcccCccc--------CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCC
Q psy16545 64 TH-DIDCVIHFAAVKAVGE--------SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPIT 130 (600)
Q Consensus 64 ~~-~~d~Vih~A~~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~ 130 (600)
.. ++|+||||||...... ..+++...+++|+.++.++++++.. .+ +++|++||...+...
T Consensus 83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------ 155 (280)
T 1xkq_A 83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA------ 155 (280)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC------
T ss_pred hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC------
Confidence 22 6999999999764321 2244667899999999999998754 34 799999998765421
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 131 E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.+. .++++++++||.+.++.
T Consensus 156 ----~-~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 199 (280)
T 1xkq_A 156 ----Q-PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF 199 (280)
T ss_dssp ----C-CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred ----C-CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCc
Confidence 1 245789999999999999998764 38999999999999984
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.36 E-value=2.3e-12 Score=127.74 Aligned_cols=152 Identities=16% Similarity=0.133 Sum_probs=112.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||+++.+|+.+++.. ...+.+++..+++ .+|++|.+++.+++++ +.+.
T Consensus 22 lVTGas~gIG~aia~~l--~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~ 94 (270)
T 3is3_A 22 LVTGSGRGIGAAVAVHL--GRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQ-----AVAHF 94 (270)
T ss_dssp EESCTTSHHHHHHHHHH--HHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH-----HHHHH
T ss_pred EEECCCchHHHHHHHHH--HHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH-----HHHHc
Confidence 48999999999985532 2222233322211 6899999998886554 3332
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHcCC--CeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHGV--YQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
.++|++|||||...... ..+++...+++|+.|+.++++++...-. .++|++||..... .+. .+
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~-~~ 163 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD----------FSV-PK 163 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT----------CCC-TT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc----------CCC-CC
Confidence 26999999999874322 3355677999999999999999987533 4999999975221 122 46
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.|+.||.+.+.+++.++.++ .+++++.++||.+.++.
T Consensus 164 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 204 (270)
T 3is3_A 164 HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM 204 (270)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTT
T ss_pred CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence 7889999999999999998875 38999999999999884
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.5e-12 Score=126.84 Aligned_cols=151 Identities=14% Similarity=0.073 Sum_probs=110.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccC-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTH-D 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~ 66 (600)
-|||++|.+|+.+++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+.. +
T Consensus 33 lVTGas~gIG~aia~~L--~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g~ 105 (276)
T 2b4q_A 33 LVTGGSRGIGQMIAQGL--LEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQA-----LGELSAR 105 (276)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHH-----HHHHCSC
T ss_pred EEeCCCChHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHH-----HHHhcCC
Confidence 58999999999996532 2233344444432 5799999988885554 33222 6
Q ss_pred CCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHH----HcCC----CeEEEecCccccCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK----SHGV----YQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 67 ~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~----~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
+|+||||||..... ...+++...+++|+.++.++++++. +.+. +++|++||...+..
T Consensus 106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~----------- 174 (276)
T 2b4q_A 106 LDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISA----------- 174 (276)
T ss_dssp CSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCC-----------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCC-----------
Confidence 99999999976432 1234566799999999998888764 3343 79999999876542
Q ss_pred CCCCCC-hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKN-VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s-~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .... .|+.||.+.+.+++.++.++ .++++++++||.+.++.
T Consensus 175 ~-~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~ 219 (276)
T 2b4q_A 175 M-GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRM 219 (276)
T ss_dssp C-CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTT
T ss_pred C-CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcc
Confidence 1 2335 89999999999999998775 38999999999999874
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.36 E-value=2e-12 Score=126.83 Aligned_cols=151 Identities=14% Similarity=0.037 Sum_probs=111.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------cccccChHHhhhHHhhhhcccccccC-CCCEEEEcCcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------EGDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAAV 76 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~ 76 (600)
-|||++|.+|+.+++.. ...+.+++.++|+ .+|++|++++.+++++ +.+.. ++|+||||||.
T Consensus 25 lVTGas~gIG~aia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~~~~g~iD~lv~nAg~ 97 (253)
T 2nm0_A 25 LVTGGNRGIGLAIARAF--ADAGDKVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKE-----IEETHGPVEVLIANAGV 97 (253)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEESSSCCCTTSEEEECCTTSHHHHHHHHHH-----HHHHTCSCSEEEEECSC
T ss_pred EEeCCCCHHHHHHHHHH--HHCCCEEEEEeCChHhhccceEEEecCCCHHHHHHHHHH-----HHHHcCCCCEEEECCCC
Confidence 58999999999996633 2333444444443 5799999998885554 33322 58999999998
Q ss_pred cCcc----cCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q psy16545 77 KAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHF 148 (600)
Q Consensus 77 ~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~ 148 (600)
.... ...+++...+++|+.++.++++++.+ .+.+++|++||...+.. . .+...|+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~-~~~~~Y~asK~a 165 (253)
T 2nm0_A 98 TKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG-----------S-AGQANYAASKAG 165 (253)
T ss_dssp CTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC-----------H-HHHHHHHHHHHH
T ss_pred CCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC-----------C-CCcHHHHHHHHH
Confidence 6432 23467788999999999999987643 46679999999754421 1 245789999999
Q ss_pred HHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 149 IEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 149 ~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+++.++.+. .++++++++||.+..+.
T Consensus 166 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 196 (253)
T 2nm0_A 166 LVGFARSLARELGSRNITFNVVAPGFVDTDM 196 (253)
T ss_dssp HHHHHHHHHHHHCSSSEEEEEEEECSBCC--
T ss_pred HHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence 999999998775 38999999999998774
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.36 E-value=5e-13 Score=135.05 Aligned_cols=166 Identities=16% Similarity=0.129 Sum_probs=115.3
Q ss_pred cCCCCcchHHHHHHHhhhccC----------------------------CCccEEecccccccccChHHhhhHHhhhhcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG----------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGW 59 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~----------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 59 (600)
.|||++|++|+++.+.....+ .+++++ .+|+.|.+++.+
T Consensus 6 lVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v-----~~D~~d~~~l~~-------- 72 (307)
T 2gas_A 6 LILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILL-----EGDINDHETLVK-------- 72 (307)
T ss_dssp EEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEE-----ECCTTCHHHHHH--------
T ss_pred EEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEE-----EeCCCCHHHHHH--------
Confidence 489999999999855322111 123444 679999988888
Q ss_pred cccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcC-CCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 60 SARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 60 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
+++ ++|+|||+|+... +.++.+++++|++.+ +++||+ | +||.. .+|..+. .|
T Consensus 73 -~~~--~~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~-~p 125 (307)
T 2gas_A 73 -AIK--QVDIVICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLD----VDRHDAV-EP 125 (307)
T ss_dssp -HHT--TCSEEEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSC----TTSCCCC-TT
T ss_pred -HHh--CCCEEEECCcccc---------------cccHHHHHHHHHhcCCceEEee-c---ccccC----cccccCC-Cc
Confidence 776 7999999998642 345789999999998 999983 3 35521 2333444 34
Q ss_pred -CChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCccc
Q psy16545 139 -KNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYET 217 (600)
Q Consensus 139 -~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~ 217 (600)
.+.| .+|..+|++++.. +++++++||+.++++... .+..... ... ..+.+.++++|.+.
T Consensus 126 ~~~~y-~sK~~~e~~~~~~-----~i~~~~lrp~~~~~~~~~------------~~~~~~~-~~~-~~~~~~~~~~~~~~ 185 (307)
T 2gas_A 126 VRQVF-EEKASIRRVIEAE-----GVPYTYLCCHAFTGYFLR------------NLAQLDA-TDP-PRDKVVILGDGNVK 185 (307)
T ss_dssp HHHHH-HHHHHHHHHHHHH-----TCCBEEEECCEETTTTGG------------GTTCTTC-SSC-CSSEEEEETTSCSE
T ss_pred chhHH-HHHHHHHHHHHHc-----CCCeEEEEcceeeccccc------------ccccccc-ccC-CCCeEEEecCCCcc
Confidence 4679 9999999988652 789999999999886311 1111000 011 33467888999999
Q ss_pred ccCcceEEeeeccccc
Q psy16545 218 EDGTGKVVAIDNFVNS 233 (600)
Q Consensus 218 ~~~~~v~d~v~~~~~a 233 (600)
+++++++|+++.+..+
T Consensus 186 ~~~i~~~Dva~~~~~~ 201 (307)
T 2gas_A 186 GAYVTEADVGTFTIRA 201 (307)
T ss_dssp EEEECHHHHHHHHHHH
T ss_pred eEEeeHHHHHHHHHHH
Confidence 9999999988766544
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.2e-12 Score=129.42 Aligned_cols=150 Identities=15% Similarity=0.083 Sum_probs=111.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||+++.+|+.+++.. ...+.+++..+|+ .+|++|.+++.+++++ +.+..
T Consensus 15 lVTGas~gIG~aia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g 87 (264)
T 3ucx_A 15 VISGVGPALGTTLARRC--AEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDE-----TMKAYG 87 (264)
T ss_dssp EEESCCTTHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHTS
T ss_pred EEECCCcHHHHHHHHHH--HHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH-----HHHHcC
Confidence 58999999999985532 2223333333332 6899999998886654 43332
Q ss_pred CCCEEEEcCcccCc-----ccCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|++|||||.... ....+++...+++|+.++.++++++.. .+ .++|++||...+.. .
T Consensus 88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-----------~- 154 (264)
T 3ucx_A 88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHS-----------Q- 154 (264)
T ss_dssp CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCC-----------C-
T ss_pred CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccC-----------C-
Confidence 69999999987532 112345677899999999999988643 34 69999999865532 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .++++++++||.|++|.
T Consensus 155 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 197 (264)
T 3ucx_A 155 AKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGT 197 (264)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccccc
Confidence 456899999999999999998874 38999999999999884
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.1e-12 Score=123.70 Aligned_cols=115 Identities=10% Similarity=0.083 Sum_probs=79.0
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc-
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY- 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY- 330 (600)
.+++++.+|+.+.+. +.+. ++|+|||+|+.... ....|+.++.+++++|++.+++|+|++||..+|
T Consensus 42 ~~~~~~~~D~~d~~~--~~~~--~~d~vi~~ag~~~~---------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~ 108 (221)
T 3ew7_A 42 KDINILQKDIFDLTL--SDLS--DQNVVVDAYGISPD---------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQ 108 (221)
T ss_dssp SSSEEEECCGGGCCH--HHHT--TCSEEEECCCSSTT---------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC---
T ss_pred CCCeEEeccccChhh--hhhc--CCCEEEECCcCCcc---------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEE
Confidence 578999999999887 6666 79999999987421 145699999999999999988999999997654
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHH-HhCCCCeeEeeccc
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER-VTGNKPVPYIFYNL 384 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~-~~~~~~~~~r~~~~ 384 (600)
+.....+..|+.+..|. +.|+.+| ...|.+ ..+.. ..+++++++||+.+
T Consensus 109 ~~~~~~~~~~~~~~~~~-~~y~~~k---~~~e~~-~~~~~~~~gi~~~ivrp~~v 158 (221)
T 3ew7_A 109 IDEDGNTLLESKGLREA-PYYPTAR---AQAKQL-EHLKSHQAEFSWTYISPSAM 158 (221)
T ss_dssp ----------------C-CCSCCHH---HHHHHH-HHHHTTTTTSCEEEEECSSC
T ss_pred cCCCCccccccCCCCCH-HHHHHHH---HHHHHH-HHHHhhccCccEEEEeCcce
Confidence 44444456677766664 7899999 556665 33443 67999999999873
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=3.2e-12 Score=126.00 Aligned_cols=151 Identities=13% Similarity=0.005 Sum_probs=109.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+.
T Consensus 8 lVTGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~ 80 (260)
T 1x1t_A 8 VVTGSTSGIGLGIATALA--AQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDN-----AVRQ 80 (260)
T ss_dssp EETTCSSHHHHHHHHHHH--HTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHH-----HHHH
T ss_pred EEeCCCcHHHHHHHHHHH--HcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHH-----HHHh
Confidence 489999999999855322 122222222221 5799999988885554 3322
Q ss_pred -CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
.++|+||||||..... ...+++...+++|+.++.++++++. +.+.+++|++||...+.. .
T Consensus 81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~ 149 (260)
T 1x1t_A 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA-----------S 149 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------C
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcC-----------C
Confidence 2699999999976432 1234566799999999999998874 345679999999876532 2
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .++++++++||.+.++.
T Consensus 150 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (260)
T 1x1t_A 150 -ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPL 192 (260)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCch
Confidence 456899999999999999998775 38999999999999885
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.9e-12 Score=126.86 Aligned_cols=151 Identities=12% Similarity=0.001 Sum_probs=108.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhccccccc-CC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCT-HD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~ 66 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+. .+
T Consensus 10 lVtGasggiG~~~a~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~~ 82 (251)
T 1zk4_A 10 IITGGTLGIGLAIATKFV--EEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDA-----TEKAFGP 82 (251)
T ss_dssp EETTTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHH-----HHHHHSS
T ss_pred EEeCCCChHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHH-----HHHHhCC
Confidence 489999999999955322 222233333322 6899999988885543 2221 25
Q ss_pred CCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCC-CeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGV-YQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~-~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
+|+||||||...... ..+++...+++|+.++.++++++. +.+. ++||++||...+.. . .
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~-~ 150 (251)
T 1zk4_A 83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG-----------D-P 150 (251)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC-----------C-T
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccC-----------C-C
Confidence 999999999764321 223456799999999888777653 4455 79999999876642 2 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc----CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH----KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~~~v~G~~ 177 (600)
+.+.|+.||.+.+.+++.++.+. .+++++++|||.++++.
T Consensus 151 ~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~ 194 (251)
T 1zk4_A 151 SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL 194 (251)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHH
T ss_pred CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchh
Confidence 56899999999999999887642 38999999999999984
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.7e-12 Score=128.49 Aligned_cols=151 Identities=13% Similarity=0.001 Sum_probs=109.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|.+|+.+++... ..+.+++.++|+ .+|++|.+++.+++++ +.+.
T Consensus 17 lVTGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~ 89 (267)
T 1iy8_A 17 LITGGGSGLGRATAVRLA--AEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTA-----TTER 89 (267)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHH-----HHHH
T ss_pred EEECCCCHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH-----HHHH
Confidence 489999999999855322 122223322221 6899999998885554 3322
Q ss_pred -CCCCEEEEcCcccCc-c----cCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAV-G----ESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~-~----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
.++|+||||||.... . ...+++...+++|+.|+.++++++ ++.+.+++|++||...+..
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------- 158 (267)
T 1iy8_A 90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG----------- 158 (267)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-----------
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC-----------
Confidence 269999999997643 1 122456678999999999877665 4556689999999865431
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.++ .++++++++||.++++.
T Consensus 159 ~-~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 202 (267)
T 1iy8_A 159 I-GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM 202 (267)
T ss_dssp C-SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred C-CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcc
Confidence 2 456789999999999999988774 38999999999999873
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.7e-12 Score=131.06 Aligned_cols=150 Identities=13% Similarity=0.024 Sum_probs=109.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------------cccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------------EGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------------~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
-|||++|.+|+++++... ..+.+++.++|+ .+|+++.+++.+++++ +
T Consensus 22 lVTGasggIG~~la~~l~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~ 94 (303)
T 1yxm_A 22 IVTGGATGIGKAIVKELL--ELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS-----T 94 (303)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH-----H
T ss_pred EEECCCcHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH-----H
Confidence 589999999999855322 222333333332 5899999988885543 2
Q ss_pred ccc-CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCC
Q psy16545 62 RCT-HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITED 132 (600)
Q Consensus 62 ~~~-~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~ 132 (600)
.+. .++|+||||||..... ...+++...+++|+.|+.++++++.. .+.+++|++||...++
T Consensus 95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------- 164 (303)
T 1yxm_A 95 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG---------- 164 (303)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC----------
T ss_pred HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccC----------
Confidence 222 2599999999965322 12244567899999999999999765 2346899999986322
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .....|+.||.+.+.+++.++.+. .+++++++|||.++|+.
T Consensus 165 --~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (303)
T 1yxm_A 165 --F-PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT 208 (303)
T ss_dssp --C-TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred --C-CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence 1 355789999999999999998775 38999999999999983
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=7.8e-13 Score=130.50 Aligned_cols=151 Identities=11% Similarity=-0.017 Sum_probs=110.4
Q ss_pred cCCCCc--chHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQG--TSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~--g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++ |.+|+.+++.... .+.+++.++|+ .+|++|.+++.+++++ +.+.
T Consensus 12 lVTGas~~~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~~ 84 (261)
T 2wyu_A 12 LVMGVTNQRSLGFAIAAKLKE--AGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAG-----VKEAF 84 (261)
T ss_dssp EEESCCSSSSHHHHHHHHHHH--HTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEECCCCCCcHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHH-----HHHHc
Confidence 589998 8899998653221 12223222221 5799999988885554 3222
Q ss_pred CCCCEEEEcCcccCc--------ccCCCChhhhHHhHHHHHHHHHHHHHHcC--CCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAV--------GESMQEPLMYYKNNLIATINLLEVMKSHG--VYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
.++|+||||||.... ....+++...+++|+.++.++++++.+.- -+++|++||...+..
T Consensus 85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------- 153 (261)
T 2wyu_A 85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV----------- 153 (261)
T ss_dssp SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB-----------
T ss_pred CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC-----------
Confidence 269999999997642 12334567799999999999999997751 258999999765431
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.++ .++++++++||.|+++.
T Consensus 154 ~-~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 197 (261)
T 2wyu_A 154 V-PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA 197 (261)
T ss_dssp C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTG
T ss_pred C-CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCch
Confidence 2 456789999999999999998775 28999999999999985
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=1.4e-12 Score=128.83 Aligned_cols=158 Identities=15% Similarity=0.077 Sum_probs=112.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|++|.+++.+++++ +...
T Consensus 18 lITGasggiG~~~a~~l--~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~ 90 (265)
T 1h5q_A 18 IVTGGNRGIGLAFTRAV--AAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQ-----IDADL 90 (265)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH-----HHHHS
T ss_pred EEECCCchHHHHHHHHH--HHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHH-----HHHhc
Confidence 58999999999995532 2223333333331 6799999988885554 3222
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc----C-CCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G-VYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
.++|+||||||...... ..+++...+++|+.++.++++++.+. + .++||++||...+.... .+..+.
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----~~~~~~ 166 (265)
T 1h5q_A 91 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQ----SSLNGS 166 (265)
T ss_dssp CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCE----EETTEE
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccc----cccccc
Confidence 25999999999864321 23456678999999999999987543 3 36899999986653211 001223
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.+. .+++++++|||.++++.
T Consensus 167 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 209 (265)
T 1h5q_A 167 -LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQ 209 (265)
T ss_dssp -CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred -ccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccc
Confidence 457899999999999999998764 38999999999999985
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.2e-12 Score=127.46 Aligned_cols=150 Identities=10% Similarity=-0.016 Sum_probs=114.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------cccccChHHhhhHHhhhhcccccccC---CCCEEEEc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------EGDIVSMYANTDLAQKELGWSARCTH---DIDCVIHF 73 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~Dl~~~~~~~~~~~~~~~~~~~~~~---~~d~Vih~ 73 (600)
-|||++|.+|+.+.+ .+...+.+++.++|+ .+|++|.+++.+++++ +.+.. ++|+||||
T Consensus 11 lVTGas~gIG~~ia~--~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~~~~g~iD~lv~~ 83 (241)
T 1dhr_A 11 LVYGGRGALGSRCVQ--AFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAE-----VGKLLGDQKVDAILCV 83 (241)
T ss_dssp EEETTTSHHHHHHHH--HHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHH-----HHHHHTTCCEEEEEEC
T ss_pred EEECCCcHHHHHHHH--HHHhCCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHH-----HHHHhCCCCCCEEEEc
Confidence 489999999999966 444445566666665 4799999988885554 33332 79999999
Q ss_pred CcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHH
Q psy16545 74 AAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTK 146 (600)
Q Consensus 74 A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK 146 (600)
||...... ..+++...+++|+.++.++++++.+. .-+++|++||...+.. . .+...|+.||
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~~~Y~asK 151 (241)
T 1dhr_A 84 AGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG-----------T-PGMIGYGMAK 151 (241)
T ss_dssp CCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------C-TTBHHHHHHH
T ss_pred ccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC-----------C-CCchHHHHHH
Confidence 99764221 22345678999999999999998764 1258999999876532 2 4568899999
Q ss_pred HHHHHHHHHHHhhc----CCceEEEEecccccCC
Q psy16545 147 HFIEEMLKDLSKAH----KEWNIISLRYFNPVGA 176 (600)
Q Consensus 147 ~~~e~~~~~~~~~~----~~~~~~ilR~~~v~G~ 176 (600)
.+.+.+++.++.++ .++++++++||.+-.+
T Consensus 152 ~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~ 185 (241)
T 1dhr_A 152 GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP 185 (241)
T ss_dssp HHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH
T ss_pred HHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc
Confidence 99999999998874 2699999999988766
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=2.3e-12 Score=127.54 Aligned_cols=151 Identities=15% Similarity=0.034 Sum_probs=110.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+.+++... ..+.+++.++|+ .+|+++.+++.+++++ +.+.
T Consensus 25 lVTGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~-----~~~~~ 97 (267)
T 1vl8_A 25 LVTGGSRGLGFGIAQGLA--EAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEA-----VKEKF 97 (267)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEECCCCHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH-----HHHHc
Confidence 589999999999955322 223333333332 5799999988885554 3322
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccc-cCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTV-YGEPQFLPITEDHPT 135 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~v-yg~~~~~~~~E~~~~ 135 (600)
.++|+||||||...... ..+++...+++|+.|+.++++++. +.+.+++|++||..+ +. +.
T Consensus 98 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~ 166 (267)
T 1vl8_A 98 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-----------TM 166 (267)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-----------CS
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc-----------CC
Confidence 26999999999864321 223456789999999999998874 345679999999762 21 22
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .++++++++||.+.++.
T Consensus 167 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 209 (267)
T 1vl8_A 167 -PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM 209 (267)
T ss_dssp -SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTT
T ss_pred -CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccc
Confidence 456789999999999999998774 38999999999998874
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.2e-12 Score=125.92 Aligned_cols=151 Identities=15% Similarity=0.054 Sum_probs=108.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccC-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTH-D 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~ 66 (600)
-|||++|.+|+.+++... ..+.+++.++|+ .+|++|.+++.+++++ +.+.. +
T Consensus 25 lVTGas~gIG~aia~~La--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g~ 97 (272)
T 2nwq_A 25 FITGATSGFGEACARRFA--EAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDN-----LPEEFAT 97 (272)
T ss_dssp EESSTTTSSHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHT-----CCGGGSS
T ss_pred EEeCCCCHHHHHHHHHHH--HCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHH-----HHHHhCC
Confidence 489999999999855322 222233333322 6899999998886654 43322 5
Q ss_pred CCEEEEcCcccCc-----ccCCCChhhhHHhHHHHHHHHHHHHH----HcCCC-eEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMK----SHGVY-QLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 67 ~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~-r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
+|+||||||.... ....+++...+++|+.|+.++++++. +.+.+ ++|++||...+.. .
T Consensus 98 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~-----------~- 165 (272)
T 2nwq_A 98 LRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP-----------Y- 165 (272)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC-----------C-
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC-----------C-
Confidence 8999999997532 11234566789999999998887764 44566 9999999865531 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.+. .++++++++||.+.++.
T Consensus 166 ~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 208 (272)
T 2nwq_A 166 PGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF 208 (272)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcc
Confidence 456789999999999999998775 38999999999999874
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=2e-12 Score=128.13 Aligned_cols=151 Identities=10% Similarity=-0.041 Sum_probs=112.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+++++.. ...+..++.++++ .+|++|.+++.+++++ +.+.
T Consensus 32 lVTGas~gIG~aia~~l--a~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~-----~~~~~ 104 (269)
T 4dmm_A 32 LVTGASRGIGRAIALEL--AAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAA-----VIERW 104 (269)
T ss_dssp EETTCSSHHHHHHHHHH--HHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH-----HHHHH
T ss_pred EEECCCCHHHHHHHHHH--HHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-----HHHHc
Confidence 48999999999986532 2222333322221 6899999998886554 3332
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+||||||...... ..+++...+++|+.|+.++++++. +.+..++|++||...+.. .
T Consensus 105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~- 172 (269)
T 4dmm_A 105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMG-----------N- 172 (269)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHC-----------C-
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC-----------C-
Confidence 26999999999874321 234567799999999999999873 345679999999765431 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...+.|+.||.+.+.+++.++.++ .|+++++++||.|.++.
T Consensus 173 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 215 (269)
T 4dmm_A 173 PGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDM 215 (269)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSC
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcc
Confidence 456899999999999999998875 38999999999999885
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.35 E-value=2.5e-12 Score=127.93 Aligned_cols=150 Identities=12% Similarity=0.100 Sum_probs=112.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||++|.+|+++++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .++|
T Consensus 31 lVTGas~GIG~aia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g~iD 103 (277)
T 4dqx_A 31 IVTGGGSGIGRATAELF--AKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEK-----TTAKWGRVD 103 (277)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHH-----HHHHHSCCC
T ss_pred EEECCCcHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHH-----HHHHcCCCC
Confidence 48999999999996532 2233334433333 6899999998886554 3332 2699
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+||||||...... ..+++...+++|+.|+.++++++.. .+..++|++||...+.. . .+.+
T Consensus 104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~~ 171 (277)
T 4dqx_A 104 VLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSA-----------I-ADRT 171 (277)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSC-----------C-TTBH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcC-----------C-CCCh
Confidence 9999999864322 2245667889999999999988743 34569999999876532 2 4568
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.|+.||.+.+.+++.++.++ .++++++++||.|.++
T Consensus 172 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 209 (277)
T 4dqx_A 172 AYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSP 209 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCc
Confidence 99999999999999998775 3899999999999877
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=2.7e-12 Score=125.48 Aligned_cols=151 Identities=12% Similarity=0.001 Sum_probs=112.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||++|.+|+.+++.. ...+.+++..+|+ .+|++|.+++.+++++ +.+..
T Consensus 9 lITGas~gIG~~~a~~l--~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~ 81 (247)
T 3lyl_A 9 LVTGASRGIGFEVAHAL--ASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAE-----IKAENL 81 (247)
T ss_dssp EESSCSSHHHHHHHHHH--HHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHTTC
T ss_pred EEECCCChHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH-----HHHHcC
Confidence 48999999999985532 2223333333332 6899999998886554 33322
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|+||||||...... ..+++...+++|+.++.++++++.+ .+..++|++||...+.. . +
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~ 149 (247)
T 3lyl_A 82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAG-----------N-P 149 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-----------C-T
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC-----------C-C
Confidence 5999999999874322 3345667999999999999988744 45569999999865532 2 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+.|+.||.+.+.+++.++.++ .++++++++||.+.++.
T Consensus 150 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 191 (247)
T 3lyl_A 150 GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDM 191 (247)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEeccc
Confidence 56899999999999999998774 38999999999999885
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.35 E-value=3.3e-12 Score=126.08 Aligned_cols=151 Identities=15% Similarity=0.056 Sum_probs=109.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+++. +...+.+++.++|+ .+|+++.+++.+++++ +.+. .
T Consensus 33 lITGas~gIG~~la~~--l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~~g 105 (262)
T 3rkr_A 33 VVTGASRGIGAAIARK--LGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATG-----VLAAHG 105 (262)
T ss_dssp EESSTTSHHHHHHHHH--HHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH-----HHHHHS
T ss_pred EEECCCChHHHHHHHH--HHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHH-----HHHhcC
Confidence 5899999999999553 22233344444443 5899999998885544 3222 2
Q ss_pred CCCEEEEcCcccCcc-----cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|+||||||..... ...+++...+++|+.|+.++++++. +.+.++||++||...+. +.
T Consensus 106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~- 173 (262)
T 3rkr_A 106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN-----------PV- 173 (262)
T ss_dssp CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC-----------CC-
T ss_pred CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC-----------CC-
Confidence 699999999983221 1234566799999999999999864 35667999999986543 22
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.+. .++++++++||.+..+.
T Consensus 174 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~ 216 (262)
T 3rkr_A 174 ADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEF 216 (262)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCc
Confidence 466899999999999999998774 38999999999998774
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=2.4e-12 Score=128.09 Aligned_cols=151 Identities=14% Similarity=0.003 Sum_probs=112.3
Q ss_pred cCCCCc--chHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 8 LGTGQG--TSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 8 ~vtG~~--g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
-|||++ |.+|+.+++. +...+.+++.++|+ .+|+++.+++.+++++ +.+..
T Consensus 10 lVTGas~~~gIG~~~a~~--l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~~ 82 (275)
T 2pd4_A 10 LIVGVANNKSIAYGIAQS--CFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNS-----VKKDL 82 (275)
T ss_dssp EEECCCSTTSHHHHHHHH--HHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHH-----HHHHT
T ss_pred EEECCCCCCcHHHHHHHH--HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHH-----HHHHc
Confidence 489998 8899999653 23333444443332 5799999988885554 33322
Q ss_pred -CCCEEEEcCcccCc--------ccCCCChhhhHHhHHHHHHHHHHHHHHcC--CCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAV--------GESMQEPLMYYKNNLIATINLLEVMKSHG--VYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 66 -~~d~Vih~A~~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
++|+||||||.... ....+++...+++|+.++.++++++...- -.++|++||...+. +
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~ 151 (275)
T 2pd4_A 83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK-----------Y 151 (275)
T ss_dssp SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------B
T ss_pred CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcC-----------C
Confidence 69999999998643 12234566799999999999999997751 25899999975542 1
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.++ .++++++++||.|.++.
T Consensus 152 ~-~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 195 (275)
T 2pd4_A 152 M-AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLA 195 (275)
T ss_dssp C-TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred C-CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccch
Confidence 2 456789999999999999998775 38999999999999884
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=1.3e-12 Score=129.79 Aligned_cols=150 Identities=14% Similarity=0.084 Sum_probs=111.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccc-c---------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEAR-R---------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~-~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|++|+++.+... ..+.+++.+++ + .+|++|.+++.+++++ +.+.
T Consensus 25 lItGasggiG~~la~~l~--~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 97 (274)
T 1ja9_A 25 LTTGAGRGIGRGIAIELG--RRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDK-----AVSHF 97 (274)
T ss_dssp EETTTTSHHHHHHHHHHH--HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH-----HHHHH
T ss_pred EEeCCCchHHHHHHHHHH--HCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-----HHHHc
Confidence 589999999999965322 22333333333 1 5899999988885543 3222
Q ss_pred CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCcccc-CCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVY-GEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vy-g~~~~~~~~E~~~~~ 136 (600)
.++|+||||||..... ...+++...+++|+.++.++++++.+. + +++|++||...+ .. .
T Consensus 98 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~-----------~- 164 (274)
T 1ja9_A 98 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTG-----------I- 164 (274)
T ss_dssp SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCS-----------C-
T ss_pred CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCC-----------C-
Confidence 2699999999986432 123445678999999999999998764 4 699999998776 32 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.|.+++.++.++ .+++++++|||.++++.
T Consensus 165 ~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~ 207 (274)
T 1ja9_A 165 PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM 207 (274)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence 456789999999999999988775 38999999999999874
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.4e-12 Score=129.33 Aligned_cols=151 Identities=12% Similarity=-0.016 Sum_probs=112.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .
T Consensus 32 lVTGas~GIG~aia~~l--a~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g 104 (270)
T 3ftp_A 32 IVTGASRGIGRAIALEL--ARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVES-----TLKEFG 104 (270)
T ss_dssp EETTCSSHHHHHHHHHH--HHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH-----HHHHHS
T ss_pred EEECCCCHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHH-----HHHHcC
Confidence 58999999999996532 2233344444433 5799999998886554 3332 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|+||||||...... ..+++...+++|+.|+.++++++. +.+..++|++||...+.. . .
T Consensus 105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~ 172 (270)
T 3ftp_A 105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAG-----------N-P 172 (270)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------C-T
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC-----------C-C
Confidence 6999999999864322 234566799999999999999874 334568999999765431 2 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+.|+.||.+.+.+++.++.++ .++++++++||.|.++.
T Consensus 173 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 214 (270)
T 3ftp_A 173 GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDM 214 (270)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcc
Confidence 56899999999999999998875 38999999999998873
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=3.5e-13 Score=136.21 Aligned_cols=170 Identities=14% Similarity=0.117 Sum_probs=116.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------------cccccChHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------------EGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------------~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
.|||++|++|+++.+... ..+.++++++|+ .+|+.|.+++.+ +++
T Consensus 8 lVtGatG~iG~~l~~~L~--~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~---------~~~ 76 (308)
T 1qyc_A 8 LLIGATGYIGRHVAKASL--DLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVE---------AVK 76 (308)
T ss_dssp EEESTTSTTHHHHHHHHH--HTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHH---------HHH
T ss_pred EEEcCCcHHHHHHHHHHH--hCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHH---------HHc
Confidence 489999999999855322 112222222221 679999988888 776
Q ss_pred cCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcC-CCeEEEecCccccCCCCCCCCCCCCCCCCC-CCh
Q psy16545 64 THDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVYGEPQFLPITEDHPTGNI-KNV 141 (600)
Q Consensus 64 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p-~s~ 141 (600)
++|+|||+|+... +.++.+++++|++.+ +++||+ |+ ||.. .+|..+. .| .+.
T Consensus 77 --~~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~----~~~~~~~-~p~~~~ 130 (308)
T 1qyc_A 77 --NVDVVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-SE---FGND----VDNVHAV-EPAKSV 130 (308)
T ss_dssp --TCSEEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSC----TTSCCCC-TTHHHH
T ss_pred --CCCEEEECCcchh---------------hhhHHHHHHHHHhcCCCceEee-cc---cccC----ccccccC-CcchhH
Confidence 7999999998642 345688999999998 999984 43 4421 2334444 34 457
Q ss_pred HHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCc
Q psy16545 142 YGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGT 221 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~ 221 (600)
| .+|..+|++++.. +++++++||+.++|+.... +..... ... ..+.+.++++|.+.++++
T Consensus 131 y-~sK~~~e~~~~~~-----~~~~~~~r~~~~~~~~~~~------------~~~~~~-~~~-~~~~~~~~~~~~~~~~~i 190 (308)
T 1qyc_A 131 F-EVKAKVRRAIEAE-----GIPYTYVSSNCFAGYFLRS------------LAQAGL-TAP-PRDKVVILGDGNARVVFV 190 (308)
T ss_dssp H-HHHHHHHHHHHHH-----TCCBEEEECCEEHHHHTTT------------TTCTTC-SSC-CSSEEEEETTSCCEEEEE
T ss_pred H-HHHHHHHHHHHhc-----CCCeEEEEeceeccccccc------------cccccc-cCC-CCCceEEecCCCceEEEe
Confidence 8 9999999988752 7899999999998863211 110000 011 335678899999999999
Q ss_pred ceEEeeecccccc
Q psy16545 222 GKVVAIDNFVNSV 234 (600)
Q Consensus 222 ~v~d~v~~~~~a~ 234 (600)
+++|+++.+..++
T Consensus 191 ~~~Dva~~~~~~l 203 (308)
T 1qyc_A 191 KEEDIGTFTIKAV 203 (308)
T ss_dssp CHHHHHHHHHTTS
T ss_pred cHHHHHHHHHHHH
Confidence 9999888766553
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=2.2e-12 Score=123.76 Aligned_cols=133 Identities=13% Similarity=0.047 Sum_probs=97.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccCCCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTHDIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~ 69 (600)
.|||++|++|+.+.+.... ..+.++++++|+ .+|++|.+++.+ +++ ++|+
T Consensus 9 lVtGasg~iG~~~~~~l~~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~---------~~~--~~d~ 76 (221)
T 3r6d_A 9 TILGAAGQIAQXLTATLLT-YTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQ---------AVT--NAEV 76 (221)
T ss_dssp EEESTTSHHHHHHHHHHHH-HCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHH---------HHT--TCSE
T ss_pred EEEeCCcHHHHHHHHHHHh-cCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHH---------HHc--CCCE
Confidence 5899999999999653320 223334433433 468999888888 676 8999
Q ss_pred EEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC-hHHHHHHH
Q psy16545 70 VIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN-VYGKTKHF 148 (600)
Q Consensus 70 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s-~Y~~sK~~ 148 (600)
|||+||.. |+. +.+++++|++.++++||++||..+|+.... +..+.... ... +|+.+|..
T Consensus 77 vv~~ag~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~-~~~~~~~~--~~~~~y~~~K~~ 137 (221)
T 3r6d_A 77 VFVGAMES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPV-ALEKWTFD--NLPISYVQGERQ 137 (221)
T ss_dssp EEESCCCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCH-HHHHHHHH--TSCHHHHHHHHH
T ss_pred EEEcCCCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCc-cccccccc--ccccHHHHHHHH
Confidence 99999853 444 899999999999999999999988864221 00000011 123 89999999
Q ss_pred HHHHHHHHHhhcCCceEEEEecccccCC
Q psy16545 149 IEEMLKDLSKAHKEWNIISLRYFNPVGA 176 (600)
Q Consensus 149 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~ 176 (600)
+|.+++. . +++++++|||.++++
T Consensus 138 ~e~~~~~----~-~i~~~~vrpg~v~~~ 160 (221)
T 3r6d_A 138 ARNVLRE----S-NLNYTILRLTWLYND 160 (221)
T ss_dssp HHHHHHH----S-CSEEEEEEECEEECC
T ss_pred HHHHHHh----C-CCCEEEEechhhcCC
Confidence 9998864 3 899999999999998
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=3.4e-12 Score=124.82 Aligned_cols=150 Identities=14% Similarity=0.089 Sum_probs=109.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+. .
T Consensus 11 lVTGas~gIG~aia~~l~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~-----~~~~~g 83 (247)
T 2jah_A 11 LITGASSGIGEATARALA--AEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVAS-----TVEALG 83 (247)
T ss_dssp EEESCSSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHHS
T ss_pred EEECCCCHHHHHHHHHHH--HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-----HHHHcC
Confidence 589999999999855322 122222222221 6899999998885554 3322 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|+||||||...... ..+++...+++|+.|+.++++++.. .+ +++|++||...+.. . .
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-----------~-~ 150 (247)
T 2jah_A 84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN-----------V-R 150 (247)
T ss_dssp CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC-----------C-T
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC-----------C-C
Confidence 6999999999864321 2234567899999999999998743 35 79999999865431 2 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+.|+.||.+.+.+++.++.+. .|+++++++||.+.++.
T Consensus 151 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 192 (247)
T 2jah_A 151 NAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTEL 192 (247)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcc
Confidence 56789999999999999988765 38999999999998874
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=4.4e-12 Score=130.78 Aligned_cols=189 Identities=13% Similarity=0.079 Sum_probs=130.4
Q ss_pred CceeEEEee-cCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecCcc-
Q psy16545 252 KKVDFYSCD-LVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCT- 328 (600)
Q Consensus 252 ~~v~~i~~D-l~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~r~v~~SS~~- 328 (600)
.+++++.+| +.+++++.++++ ++|+|||+++... . ..|..+ .+++++|++.+ ++||||+||..
T Consensus 51 ~~v~~v~~D~l~d~~~l~~~~~--~~d~Vi~~a~~~~-----~------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~ 116 (352)
T 1xgk_A 51 PNVTLFQGPLLNNVPLMDTLFE--GAHLAFINTTSQA-----G------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDH 116 (352)
T ss_dssp TTEEEEESCCTTCHHHHHHHHT--TCSEEEECCCSTT-----S------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCG
T ss_pred CCcEEEECCccCCHHHHHHHHh--cCCEEEEcCCCCC-----c------HHHHHH-HHHHHHHHHcCCccEEEEeCCccc
Confidence 368899999 999999999998 7899999987531 0 236666 99999999999 99999999975
Q ss_pred -cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCCCC
Q psy16545 329 -VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKP 407 (600)
Q Consensus 329 -vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~~ 407 (600)
+|+. .+ .++|+.+| ..+|.+++. .+++++++||+.+|++....+
T Consensus 117 ~~~~~------------~~-~~~y~~sK---~~~E~~~~~----~gi~~~ivrpg~~g~~~~~~~--------------- 161 (352)
T 1xgk_A 117 SLYGP------------WP-AVPMWAPK---FTVENYVRQ----LGLPSTFVYAGIYNNNFTSLP--------------- 161 (352)
T ss_dssp GGTSS------------CC-CCTTTHHH---HHHHHHHHT----SSSCEEEEEECEEGGGCBSSS---------------
T ss_pred cccCC------------CC-CccHHHHH---HHHHHHHHH----cCCCEEEEecceecCCchhcc---------------
Confidence 4432 12 26799999 778888875 489999999876655332110
Q ss_pred cceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhh
Q psy16545 408 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLL 487 (600)
Q Consensus 408 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 487 (600)
.+.+...... .+. ..+.+ .+++++.
T Consensus 162 ------------------------------~~~~~~~~~~----------------~g~-~~~~~--~~~~~~~------ 186 (352)
T 1xgk_A 162 ------------------------------YPLFQMELMP----------------DGT-FEWHA--PFDPDIP------ 186 (352)
T ss_dssp ------------------------------CSSCBEEECT----------------TSC-EEEEE--SSCTTSC------
T ss_pred ------------------------------cccccccccC----------------CCc-eEEee--ccCCCCc------
Confidence 0000000000 011 10000 1123333
Q ss_pred hhhhhhcCCCccccccCCCCCcchhH-HHHHHHhhhhcCCCC---ceeEeEcCCCCCccHHHHHHHHhhhcCCccccccc
Q psy16545 488 RTFERVTGKPVPYIFYNLGTGQGTSV-LQLLRTFERVTGKPV---PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVE 563 (600)
Q Consensus 488 ~~fi~v~d~~~~~~~~d~~~~~~~~v-~d~~~a~~~~~~~~~---~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~ 563 (600)
++|+| + +|+++++..++.++. .+++||+++ +.+|+.|+++.+.+.+|.+.++...
T Consensus 187 ~~~i~--------------------v~~Dva~ai~~~l~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~~~~v 245 (352)
T 1xgk_A 187 LPWLD--------------------AEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQV 245 (352)
T ss_dssp EEEEC--------------------HHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEEC
T ss_pred eeeEe--------------------cHHHHHHHHHHHHhCCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCCceEEC
Confidence 67777 7 788998888886542 478999995 6799999999999999987666555
Q ss_pred CC
Q psy16545 564 AR 565 (600)
Q Consensus 564 ~~ 565 (600)
|.
T Consensus 246 p~ 247 (352)
T 1xgk_A 246 PK 247 (352)
T ss_dssp SS
T ss_pred CH
Confidence 53
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=2.4e-12 Score=126.36 Aligned_cols=147 Identities=12% Similarity=-0.003 Sum_probs=109.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCcc-EEecccc---------------------cccccCh-HHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVP-YIVEARR---------------------EGDIVSM-YANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~-~~~~~~~---------------------~~Dl~~~-~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|.+|+.+.+.. ...+.+ ++.++|+ .+|++|. +++.+++++ +.+.
T Consensus 9 lVtGas~gIG~~~a~~l--~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~~~ 81 (254)
T 1sby_A 9 IFVAALGGIGLDTSREL--VKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKK-----IFDQ 81 (254)
T ss_dssp EEETTTSHHHHHHHHHH--HHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHH-----HHHH
T ss_pred EEECCCChHHHHHHHHH--HHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHH-----HHHh
Confidence 48999999999996533 222332 3333332 4799988 777775443 3222
Q ss_pred -CCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc----C---CCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH----G---VYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~---~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+||||||... .+++...+++|+.++.++++++.+. + ..++|++||...+.. .
T Consensus 82 ~g~id~lv~~Ag~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~- 145 (254)
T 1sby_A 82 LKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-----------I- 145 (254)
T ss_dssp HSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----------C-
T ss_pred cCCCCEEEECCccCC----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC-----------C-
Confidence 26999999999753 4677889999999999999998643 1 357999999876642 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.+. .++++++++||.+.++.
T Consensus 146 ~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~ 188 (254)
T 1sby_A 146 HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL 188 (254)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcc
Confidence 456789999999999999988763 28999999999999884
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=2.4e-12 Score=128.79 Aligned_cols=151 Identities=13% Similarity=0.039 Sum_probs=113.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------------------------------cccccChHHhh
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------------------------------EGDIVSMYANT 50 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------------------------~~Dl~~~~~~~ 50 (600)
-|||+++.+|+.+++.. ...+.+++.+|++ .+|++|.+++.
T Consensus 15 lVTGas~gIG~aia~~l--a~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 92 (286)
T 3uve_A 15 FVTGAARGQGRSHAVRL--AQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALK 92 (286)
T ss_dssp EEESTTSHHHHHHHHHH--HHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred EEeCCCchHHHHHHHHH--HHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHH
Confidence 48999999999986532 3333444443332 58999999988
Q ss_pred hHHhhhhccccccc-CCCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHHc----C-CCeEEEecCcc
Q psy16545 51 DLAQKELGWSARCT-HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSH----G-VYQLVFSSSCT 119 (600)
Q Consensus 51 ~~~~~~~~~~~~~~-~~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~~r~I~~SS~~ 119 (600)
+++++ +.+. .++|++|||||...... ..+++...+++|+.++.++++++... + ..++|++||..
T Consensus 93 ~~~~~-----~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~ 167 (286)
T 3uve_A 93 AAVDS-----GVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVG 167 (286)
T ss_dssp HHHHH-----HHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred HHHHH-----HHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchh
Confidence 86654 3332 26999999999864432 23456779999999999999987542 2 35899999986
Q ss_pred ccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 120 VYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 120 vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.. . ...+.|+.||.+.+.+++.++.++ .+++++.++||.|..+.
T Consensus 168 ~~~~-----------~-~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~ 215 (286)
T 3uve_A 168 GLKA-----------Y-PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPM 215 (286)
T ss_dssp GTSC-----------C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTT
T ss_pred hccC-----------C-CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCc
Confidence 6532 2 456889999999999999998875 28999999999999885
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.3e-12 Score=125.73 Aligned_cols=150 Identities=14% Similarity=0.079 Sum_probs=112.7
Q ss_pred cCCCCcchHHHHHHHhhhccC-CCccEEecccc-----------cccccChHHhhhHHhhhhcccccccCCCCEEEEcCc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-KPVPYIVEARR-----------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAA 75 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-~~~~~~~~~~~-----------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~ 75 (600)
-|||+++.+|+.+++. +.. .+..++..+++ .+|++|.+++.++++. ++..++|++|||||
T Consensus 8 lITGas~gIG~~~a~~--l~~~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~------~~~~~id~lv~nAg 79 (244)
T 4e4y_A 8 LVTGGSKGIGKAVVEL--LLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDI------IKNVSFDGIFLNAG 79 (244)
T ss_dssp EEETTTSHHHHHHHHH--HTTSTTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHH------TTTCCEEEEEECCC
T ss_pred EEeCCCChHHHHHHHH--HHhcCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHH------HHhCCCCEEEECCc
Confidence 4899999999999653 222 33344433433 5799999999886532 33347999999999
Q ss_pred ccCccc----CCCChhhhHHhHHHHHHHHHHHHHHcCC--CeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q psy16545 76 VKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHGV--YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFI 149 (600)
Q Consensus 76 ~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~ 149 (600)
...... ..+++...+++|+.|+.++++++...-. .++|++||...+.. . .+.+.|+.||.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~-~~~~~Y~asKaa~ 147 (244)
T 4e4y_A 80 ILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA-----------K-PNSFAYTLSKGAI 147 (244)
T ss_dssp CCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC-----------C-TTBHHHHHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC-----------C-CCCchhHHHHHHH
Confidence 864322 2345667899999999999999876522 48999999866532 2 4567899999999
Q ss_pred HHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 150 EEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 150 e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+++.++.++ .++++++++||.|.++.
T Consensus 148 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 177 (244)
T 4e4y_A 148 AQMTKSLALDLAKYQIRVNTVCPGTVDTDL 177 (244)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEESCBCCHH
T ss_pred HHHHHHHHHHHHHcCeEEEEEecCccCchh
Confidence 99999998764 28999999999998873
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.34 E-value=3.2e-12 Score=127.38 Aligned_cols=153 Identities=15% Similarity=0.088 Sum_probs=109.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+.
T Consensus 36 lVTGasggIG~~la~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~-----~~~~ 108 (279)
T 1xg5_A 36 LVTGASGGIGAAVARALV--QQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA-----IRSQ 108 (279)
T ss_dssp EEESTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH-----HHHH
T ss_pred EEECCCchHHHHHHHHHH--HCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHH-----HHHh
Confidence 589999999999965322 223333333332 5799999988885543 2222
Q ss_pred -CCCCEEEEcCcccCccc----CCCChhhhHHhHHHH----HHHHHHHHHHcCC--CeEEEecCccccCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIA----TINLLEVMKSHGV--YQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~g----t~~ll~a~~~~~~--~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
.++|+||||||...... ...++...+++|+.+ +..++.++++.+. +++|++||...+.. .
T Consensus 109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~---------~ 179 (279)
T 1xg5_A 109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------L 179 (279)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---------C
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc---------C
Confidence 26999999999764322 224466789999999 5566666777765 79999999876642 1
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc----CCceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH----KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~~~v~G~~ 177 (600)
+. .+.+.|+.||.+.+.+++.++.+. .++++++++||.|.++.
T Consensus 180 ~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~ 226 (279)
T 1xg5_A 180 PL-SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF 226 (279)
T ss_dssp SC-GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH
T ss_pred CC-CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchh
Confidence 22 456789999999999999887663 37999999999998873
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=2.1e-12 Score=126.35 Aligned_cols=151 Identities=15% Similarity=0.073 Sum_probs=113.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||+++.+|+.+++.. ...+.+++..+|+ .+|++|.+++.+++++ +.+. .++|
T Consensus 10 lVTGas~gIG~a~a~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g~id 82 (247)
T 3rwb_A 10 LVTGAAQGIGKAIAARL--AADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAE-----IQALTGGID 82 (247)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHH-----HHHHHSCCS
T ss_pred EEECCCCHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHH-----HHHHCCCCC
Confidence 48999999999996532 2333444444443 5899999998886554 3332 2699
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHH----HHHcC-CCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEV----MKSHG-VYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a----~~~~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
++|||||...... ..+++...+++|+.|+.+++++ +++.+ ..++|++||...+.. . .+.
T Consensus 83 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~ 150 (247)
T 3rwb_A 83 ILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAG-----------T-PNM 150 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHT-----------C-TTC
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccC-----------C-CCc
Confidence 9999999864322 2345677999999999999998 44544 579999999865532 2 456
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.|+.||.+.+.+++.++.++ .+++++.++||.|..+.
T Consensus 151 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 190 (247)
T 3rwb_A 151 AAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDG 190 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcc
Confidence 899999999999999998875 38999999999998873
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=3.7e-12 Score=127.71 Aligned_cols=151 Identities=13% Similarity=0.092 Sum_probs=113.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+++++.. ...+.+++.++++ .+|++|.+++.+++++ +.+.
T Consensus 51 lVTGas~GIG~aia~~l--a~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~ 123 (291)
T 3ijr_A 51 LITGGDSGIGRAVSIAF--AKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQE-----TVRQL 123 (291)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHH-----HHHHH
T ss_pred EEeCCCcHHHHHHHHHH--HHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-----HHHHc
Confidence 58999999999985532 2222333333322 5799999998885554 3332
Q ss_pred CCCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
.++|++|||||...... ..+++...+++|+.|+.++++++... ...++|++||...+.. . .
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~ 191 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEG-----------N-E 191 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHC-----------C-T
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCC-----------C-C
Confidence 26999999999764322 33456779999999999999999875 2358999999876642 2 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+.|+.||.+.+.+++.++.++ .++++++++||.|+++.
T Consensus 192 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 233 (291)
T 3ijr_A 192 TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPL 233 (291)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTH
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCc
Confidence 56889999999999999998875 38999999999999883
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.34 E-value=3.2e-12 Score=126.80 Aligned_cols=151 Identities=16% Similarity=0.088 Sum_probs=110.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||++|.+|+.+++.. ...+.+++..+|+ .+|++|.+++.+++++ +.+. .++|
T Consensus 32 lVTGas~GIG~aia~~l--a~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g~iD 104 (272)
T 4dyv_A 32 IVTGAGSGVGRAVAVAL--AGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTA-----TVEKFGRVD 104 (272)
T ss_dssp EETTTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHH-----HHHHHSCCC
T ss_pred EEeCCCcHHHHHHHHHH--HHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHH-----HHHHcCCCC
Confidence 58999999999996532 2233344444443 6799999998886554 3332 2699
Q ss_pred EEEEcCcccCcc-----cCCCChhhhHHhHHHHHHHHHHHHHH----cC--CCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVMKS----HG--VYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 69 ~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
+||||||..... ...+++...+++|+.|+.++++++.. .+ -.++|++||...+. +. .
T Consensus 105 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~-----------~~-~ 172 (272)
T 4dyv_A 105 VLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS-----------PR-P 172 (272)
T ss_dssp EEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS-----------CC-T
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC-----------CC-C
Confidence 999999986432 12345677999999999999888744 33 35899999976543 22 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+.|+.||.+.+.+++.++.++ .+++++.++||.|..+.
T Consensus 173 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 214 (272)
T 4dyv_A 173 YSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPM 214 (272)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChh
Confidence 56889999999999999998875 38999999999999874
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.34 E-value=2.8e-12 Score=128.25 Aligned_cols=151 Identities=14% Similarity=0.094 Sum_probs=110.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+.+ .+...+.+++.++|+ .+|++|.+++.+++++ +.+. .
T Consensus 48 lITGasggIG~~la~--~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~~~~~ 120 (285)
T 2c07_A 48 LVTGAGRGIGREIAK--MLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK-----ILTEHK 120 (285)
T ss_dssp EEESTTSHHHHHHHH--HHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH-----HHHHCS
T ss_pred EEECCCcHHHHHHHH--HHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHH-----HHHhcC
Confidence 589999999999955 333333333333322 5799999988885544 3222 2
Q ss_pred CCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|+||||||..... ...+++...+++|+.|+.++++++. +.+.++||++||...+.. . .
T Consensus 121 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~-~ 188 (285)
T 2c07_A 121 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG-----------N-V 188 (285)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-----------C-T
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC-----------C-C
Confidence 699999999986432 1234566789999999888888775 456679999999865431 1 3
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+.|+.||.+.+.+++.++.+. .+++++++|||.+.++.
T Consensus 189 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 230 (285)
T 2c07_A 189 GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDM 230 (285)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCc
Confidence 56789999999999999988764 38999999999999884
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.7e-12 Score=130.29 Aligned_cols=151 Identities=14% Similarity=0.105 Sum_probs=113.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------------------cccccChHHhhhHHh
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------------------EGDIVSMYANTDLAQ 54 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------------~~Dl~~~~~~~~~~~ 54 (600)
-|||+++.+|+.+++. +...+.+++.+|++ .+|++|.+++.++++
T Consensus 50 lVTGas~GIG~aia~~--la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 127 (317)
T 3oec_A 50 FITGAARGQGRTHAVR--LAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVD 127 (317)
T ss_dssp EESSCSSHHHHHHHHH--HHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred EEeCCCcHHHHHHHHH--HHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 5899999999999653 33334444444332 579999999888655
Q ss_pred hhhccccccc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cC-CCeEEEecCccccCCC
Q psy16545 55 KELGWSARCT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG-VYQLVFSSSCTVYGEP 124 (600)
Q Consensus 55 ~~~~~~~~~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~r~I~~SS~~vyg~~ 124 (600)
+ +.+. .++|+||||||...... ..+++...+++|+.|+.++++++.. .+ -.+||++||...+..
T Consensus 128 ~-----~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~- 201 (317)
T 3oec_A 128 E-----ALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG- 201 (317)
T ss_dssp H-----HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC-
T ss_pred H-----HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC-
Confidence 4 3332 26999999999875322 2345667899999999999998743 32 358999999865532
Q ss_pred CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 125 QFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 125 ~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. ...+.|+.||.+.+.+++.++.++ .|+++++++||.|.++.
T Consensus 202 ----------~-~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 245 (317)
T 3oec_A 202 ----------A-PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM 245 (317)
T ss_dssp ----------C-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred ----------C-CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcc
Confidence 2 456889999999999999998875 38999999999999873
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.34 E-value=4e-12 Score=126.07 Aligned_cols=152 Identities=10% Similarity=-0.006 Sum_probs=112.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
-|||++|.+|+.+++.. ...+.+++..+++ .+|++|.+++.+++++ +.+..
T Consensus 35 lVTGas~GIG~aia~~l--a~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~ 107 (271)
T 3v2g_A 35 FVTGGSRGIGAAIAKRL--ALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRE-----TVEAL 107 (271)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEeCCCcHHHHHHHHHH--HHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-----HHHHc
Confidence 48999999999985532 2222222222111 6899999998886554 33322
Q ss_pred -CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 66 -~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
++|++|||||...... ..+++...+++|+.|+.++++++... ...++|++||....-. +. .+
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~----------~~-~~ 176 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV----------PW-PG 176 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC----------CS-TT
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC----------CC-CC
Confidence 6999999999864322 33456779999999999999999765 3469999999643211 22 45
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.|+.||.+.+.+++.++.++ .+++++.++||.|.++.
T Consensus 177 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 217 (271)
T 3v2g_A 177 ISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDM 217 (271)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSS
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCc
Confidence 6899999999999999998875 38999999999999985
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.34 E-value=4.3e-12 Score=127.62 Aligned_cols=151 Identities=13% Similarity=0.072 Sum_probs=109.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------------cccccChHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------------EGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------------~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
-|||++|.+|+.+++... ..+.+++.++|+ .+|++|++++.+++++ +.+
T Consensus 30 lVTGas~gIG~aia~~L~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~ 102 (297)
T 1xhl_A 30 IITGSSNGIGRSAAVIFA--KEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT-----TLA 102 (297)
T ss_dssp EETTCSSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH-----HHH
T ss_pred EEeCCCcHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHH-----HHH
Confidence 589999999999855322 122222222221 6899999988885554 332
Q ss_pred c-CCCCEEEEcCcccCccc------CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCC
Q psy16545 64 T-HDIDCVIHFAAVKAVGE------SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITED 132 (600)
Q Consensus 64 ~-~~~d~Vih~A~~~~~~~------~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~ 132 (600)
. .++|+||||||...... ..+++...+++|+.|+.++++++.+ .+ +++|++||...+...
T Consensus 103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~-------- 173 (297)
T 1xhl_A 103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA-------- 173 (297)
T ss_dssp HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC--------
T ss_pred hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC--------
Confidence 2 26999999999764321 2345667999999999999988754 34 799999998765421
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.+. .++++++++||.|.++.
T Consensus 174 --~-~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~ 217 (297)
T 1xhl_A 174 --H-SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF 217 (297)
T ss_dssp --C-TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSH
T ss_pred --C-CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcc
Confidence 1 245789999999999999988764 38999999999999874
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.9e-12 Score=127.28 Aligned_cols=151 Identities=15% Similarity=0.028 Sum_probs=114.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||+++.+|+.+++.. ...+.+++..+|+ .+|++|.+++.+++++ +.+. .++|
T Consensus 12 lVTGas~gIG~a~a~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g~id 84 (255)
T 4eso_A 12 IVIGGTHGMGLATVRRL--VEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAA-----AGQTLGAID 84 (255)
T ss_dssp EEETCSSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHH-----HHHHHSSEE
T ss_pred EEECCCCHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHH-----HHHHhCCCC
Confidence 58999999999996532 2333344444443 5899999988885554 3222 2699
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChH
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVY 142 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y 142 (600)
++|||||...... ..+++...+++|+.++.++++++... .-.++|++||...+.. . ++.+.|
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~~~Y 152 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG-----------H-PGMSVY 152 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB-----------C-TTBHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC-----------C-CCchHH
Confidence 9999999864322 33456779999999999999999764 2258999999876542 2 456899
Q ss_pred HHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 143 GKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 143 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.||.+.+.+++.++.++ .+++++.++||.|.+|.
T Consensus 153 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 189 (255)
T 4eso_A 153 SASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPT 189 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSS
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcc
Confidence 999999999999999876 38999999999999985
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.9e-12 Score=128.36 Aligned_cols=149 Identities=17% Similarity=0.079 Sum_probs=110.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------cccccChHHhhhHHhhhhccccccc-CCCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------EGDIVSMYANTDLAQKELGWSARCT-HDIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~ 69 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .++|+
T Consensus 13 lVTGas~gIG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g~iD~ 85 (270)
T 1yde_A 13 VVTGGGRGIGAGIVRAF--VNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSE-----TIRRFGRLDC 85 (270)
T ss_dssp EEETCSSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHH-----HHHHHSCCCE
T ss_pred EEECCCcHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHH-----HHHHcCCCCE
Confidence 58999999999996532 2233344443432 5899999998885554 3322 26999
Q ss_pred EEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccc-cCCCCCCCCCCCCCCCCCCC
Q psy16545 70 VIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTV-YGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 70 Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~v-yg~~~~~~~~E~~~~~~p~s 140 (600)
||||||...... ..+++...+++|+.++.++++++... +.+++|++||... ++. ....
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-------------~~~~ 152 (270)
T 1yde_A 86 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ-------------AQAV 152 (270)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC-------------TTCH
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCC-------------CCCc
Confidence 999999764211 22345679999999999999998531 2469999999754 332 3457
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.|+.||.+.+.+++.++.+. .+++++++|||.++++
T Consensus 153 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~ 190 (270)
T 1yde_A 153 PYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTP 190 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred ccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccc
Confidence 89999999999999998764 3899999999999987
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.33 E-value=6.4e-12 Score=125.63 Aligned_cols=147 Identities=14% Similarity=0.080 Sum_probs=112.9
Q ss_pred cCCCCcchHHHHHHHhhhcc-----------------------------CCCccEEecccccccccChHHhhhHHhhhhc
Q psy16545 8 LGTGQGTSVLQLLRTFERVT-----------------------------GKPVPYIVEARREGDIVSMYANTDLAQKELG 58 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~-----------------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 58 (600)
-|||+++.+|+.+++..... +.++.++ .+|++|.+++.+++++
T Consensus 37 lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-----~~Dv~d~~~v~~~~~~--- 108 (287)
T 3rku_A 37 LITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVA-----QLDITQAEKIKPFIEN--- 108 (287)
T ss_dssp EEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEE-----ECCTTCGGGHHHHHHT---
T ss_pred EEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEE-----ECCCCCHHHHHHHHHH---
Confidence 48999999999886432111 2235566 7899999999986665
Q ss_pred ccccccC-CCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCC
Q psy16545 59 WSARCTH-DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLP 128 (600)
Q Consensus 59 ~~~~~~~-~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~ 128 (600)
+.+.. ++|+||||||...... ..+++...+++|+.|+.++++++ ++.+..++|++||...+.
T Consensus 109 --~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~------ 180 (287)
T 3rku_A 109 --LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRD------ 180 (287)
T ss_dssp --SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS------
T ss_pred --HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcC------
Confidence 44332 5999999999764211 23456779999999999999997 445667999999986543
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 129 ITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 129 ~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+. .+.+.|+.||.+.+.+++.++.++ .+++++.++||.|..+
T Consensus 181 -----~~-~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~ 224 (287)
T 3rku_A 181 -----AY-PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETE 224 (287)
T ss_dssp -----CC-TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESS
T ss_pred -----CC-CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCc
Confidence 22 456889999999999999999885 3899999999999887
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.33 E-value=3.6e-12 Score=125.37 Aligned_cols=149 Identities=12% Similarity=0.016 Sum_probs=108.5
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-C
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH-D 66 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~ 66 (600)
|||++|.+|+.+.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+.. +
T Consensus 7 VTGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~~g~ 79 (256)
T 1geg_A 7 VTGAGQGIGKAIALRLV--KDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQ-----ARKTLGG 79 (256)
T ss_dssp EETTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH-----HHHHTTC
T ss_pred EECCCChHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-----HHHHhCC
Confidence 79999999999855322 222233333322 6899999988885554 33322 6
Q ss_pred CCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cC-CCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG-VYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
+|+||||||...... ..+++...+++|+.++.++++++.+ .+ .+++|++||...+.. . .
T Consensus 80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~ 147 (256)
T 1geg_A 80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG-----------N-P 147 (256)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------C-T
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC-----------C-C
Confidence 999999999764321 2244567899999999999888754 34 579999999764421 1 3
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+.+.|+.||.+.+.+++.++.+. .++++++++||.+.++
T Consensus 148 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 188 (256)
T 1geg_A 148 ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP 188 (256)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccc
Confidence 45789999999999999998764 3899999999999987
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.1e-11 Score=125.52 Aligned_cols=198 Identities=15% Similarity=0.158 Sum_probs=131.6
Q ss_pred HhhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEec
Q psy16545 247 EQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSS 325 (600)
Q Consensus 247 ~~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~r~v~~S 325 (600)
..+...+++++.+|+.+++++.++++ ++|+|||+++..... .|+.++.+++++|++.| ++|||+ |
T Consensus 50 ~~~~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~~~~~-----------~~~~~~~~l~~aa~~~g~v~~~v~-S 115 (313)
T 1qyd_A 50 LYFKQLGAKLIEASLDDHQRLVDALK--QVDVVISALAGGVLS-----------HHILEQLKLVEAIKEAGNIKRFLP-S 115 (313)
T ss_dssp HHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEECCCCSSSS-----------TTTTTHHHHHHHHHHSCCCSEEEC-S
T ss_pred HHHHhCCeEEEeCCCCCHHHHHHHHh--CCCEEEECCccccch-----------hhHHHHHHHHHHHHhcCCCceEEe-c
Confidence 33445679999999999999999998 899999999875321 26778899999999998 999996 3
Q ss_pred CcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCC
Q psy16545 326 SCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGN 405 (600)
Q Consensus 326 S~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~ 405 (600)
+||.....+ +.+..|..+.| .+| ...|.+++ ..+++++++||+.+++ . + ...
T Consensus 116 ---~~g~~~~~~---~~~~~p~~~~y-~sK---~~~e~~~~----~~g~~~~ilrp~~~~~----------~-~---~~~ 167 (313)
T 1qyd_A 116 ---EFGMDPDIM---EHALQPGSITF-IDK---RKVRRAIE----AASIPYTYVSSNMFAG----------Y-F---AGS 167 (313)
T ss_dssp ---CCSSCTTSC---CCCCSSTTHHH-HHH---HHHHHHHH----HTTCCBCEEECCEEHH----------H-H---TTT
T ss_pred ---CCcCCcccc---ccCCCCCcchH-HHH---HHHHHHHH----hcCCCeEEEEeceecc----------c-c---ccc
Confidence 566432211 22333433678 899 66777765 4689999999866521 0 0 000
Q ss_pred CCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchh
Q psy16545 406 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQ 485 (600)
Q Consensus 406 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 485 (600)
.. ... ....+ .+.++++ +++++. .
T Consensus 168 ~~--------~~~----------------~~~~~------------------------~~~~~~~----~~~g~~--~-- 191 (313)
T 1qyd_A 168 LA--------QLD----------------GHMMP------------------------PRDKVLI----YGDGNV--K-- 191 (313)
T ss_dssp SS--------CTT----------------CCSSC------------------------CSSEECC----BTTSCS--E--
T ss_pred cc--------ccc----------------ccccC------------------------CCCeEEE----eCCCCc--e--
Confidence 00 000 00000 0111111 122332 2
Q ss_pred hhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCC-ceeEeEcCC-CCCccHHHHHHHHhhhcCCccccccc
Q psy16545 486 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV-PYIFYNLGT-GQGTSVLQLLRTFERVTGKPVPYIVE 563 (600)
Q Consensus 486 ~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~-~~~~~nl~~-~~~~s~~e~~~~~~~~~g~~~~~~~~ 563 (600)
++|+| ++|+++++..++..+. .++.|++.+ ++.+|+.|+++.+.+.+|.+.++...
T Consensus 192 --~~~i~--------------------~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~ 249 (313)
T 1qyd_A 192 --GIWVD--------------------EDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYI 249 (313)
T ss_dssp --EEEEC--------------------HHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCB
T ss_pred --EEEEE--------------------HHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCCCCceEEC
Confidence 67777 8999999998887653 367788775 47999999999999999987666555
Q ss_pred C
Q psy16545 564 A 564 (600)
Q Consensus 564 ~ 564 (600)
+
T Consensus 250 ~ 250 (313)
T 1qyd_A 250 S 250 (313)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.8e-12 Score=125.77 Aligned_cols=151 Identities=9% Similarity=-0.011 Sum_probs=106.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTHD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~ 66 (600)
-|||+++.+|+.+++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+..+
T Consensus 11 lVTGas~GIG~aia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~g~ 83 (252)
T 3h7a_A 11 AVIGAGDYIGAEIAKKF--AAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNA-----ADAHAP 83 (252)
T ss_dssp EEECCSSHHHHHHHHHH--HHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH-----HHHHSC
T ss_pred EEECCCchHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHH-----HHhhCC
Confidence 48999999999995532 2223333333332 6899999999886655 333336
Q ss_pred CCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 67 ~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
+|++|||||..... ...+++...+++|+.|+.++++++ ++.+..++|++||...+. +. ..
T Consensus 84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~-~~ 151 (252)
T 3h7a_A 84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLR-----------GG-SG 151 (252)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTC-----------CC-TT
T ss_pred ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcC-----------CC-CC
Confidence 99999999986532 223456679999999999999887 344557999999976543 12 45
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceE-EEEecccccCCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNI-ISLRYFNPVGAH 177 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~-~ilR~~~v~G~~ 177 (600)
.+.|+.||.+.+.+++.++.++ .++++ ++++||.|..+.
T Consensus 152 ~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~ 193 (252)
T 3h7a_A 152 FAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAW 193 (252)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChh
Confidence 6889999999999999998875 37999 899999998774
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.33 E-value=6.1e-13 Score=126.94 Aligned_cols=108 Identities=12% Similarity=-0.001 Sum_probs=87.8
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
.+++++.+|+.+.+.+.+++ +|+|||+|+.... ...++...++.|+.++.+++++|++.+++|||++||..+|+
T Consensus 46 ~~~~~~~~D~~~~~~~~~~~----~d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 119 (215)
T 2a35_A 46 PRLDNPVGPLAELLPQLDGS----IDTAFCCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA 119 (215)
T ss_dssp TTEECCBSCHHHHGGGCCSC----CSEEEECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT
T ss_pred CCceEEeccccCHHHHHHhh----hcEEEECeeeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCC
Confidence 35778889998887766655 8999999987432 24577889999999999999999999999999999999986
Q ss_pred CCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCC-CeeEeecc-cCC
Q psy16545 332 EPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNK-PVPYIFYN-LGT 386 (600)
Q Consensus 332 ~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~-~~~~r~~~-~g~ 386 (600)
. + .++|+.+| ...|.+++. .+++ ++++||+. +|+
T Consensus 120 ~-------------~-~~~y~~sK---~~~e~~~~~----~~~~~~~~vrp~~v~g~ 155 (215)
T 2a35_A 120 K-------------S-SIFYNRVK---GELEQALQE----QGWPQLTIARPSLLFGP 155 (215)
T ss_dssp T-------------C-SSHHHHHH---HHHHHHHTT----SCCSEEEEEECCSEEST
T ss_pred C-------------C-ccHHHHHH---HHHHHHHHH----cCCCeEEEEeCceeeCC
Confidence 2 2 37899999 677887764 4899 99999887 443
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.33 E-value=3.9e-13 Score=136.85 Aligned_cols=166 Identities=13% Similarity=0.109 Sum_probs=116.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------------cccccChHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------------EGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------------~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
.|||++|++|+++.+.... .+.++++++|+ .+|+.|.+++.+ +++
T Consensus 8 lVtGatG~iG~~l~~~L~~--~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~---------a~~ 76 (321)
T 3c1o_A 8 IIYGGTGYIGKFMVRASLS--FSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVS---------VLK 76 (321)
T ss_dssp EEETTTSTTHHHHHHHHHH--TTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHH---------HHT
T ss_pred EEEcCCchhHHHHHHHHHh--CCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHH---------HHc
Confidence 4899999999999653221 22233333332 579999988888 776
Q ss_pred cCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcC-CCeEEEecCccccCCCCCCCCCCCCCCCCC-CCh
Q psy16545 64 THDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVYGEPQFLPITEDHPTGNI-KNV 141 (600)
Q Consensus 64 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p-~s~ 141 (600)
++|+|||+|+... +.++.+++++|++.+ +++||+ | +||.. .+|..+. .| .+.
T Consensus 77 --~~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~-~p~~~~ 130 (321)
T 3c1o_A 77 --QVDIVISALPFPM---------------ISSQIHIINAIKAAGNIKRFLP-S---DFGCE----EDRIKPL-PPFESV 130 (321)
T ss_dssp --TCSEEEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC-S---CCSSC----GGGCCCC-HHHHHH
T ss_pred --CCCEEEECCCccc---------------hhhHHHHHHHHHHhCCccEEec-c---ccccC----ccccccC-CCcchH
Confidence 7999999998642 345789999999998 999983 3 35531 2333443 34 467
Q ss_pred HHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHh---hcCCCCeEEEecCCcccc
Q psy16545 142 YGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQV---AIGSKPHFTVFGADYETE 218 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~g~g~~~~ 218 (600)
| .+|..+|++++.. +++++++||+.++++ +.+.+... .. .++.+.++++|.+.+
T Consensus 131 y-~sK~~~e~~~~~~-----~~~~~~lrp~~~~~~----------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 187 (321)
T 3c1o_A 131 L-EKKRIIRRAIEAA-----ALPYTYVSANCFGAY----------------FVNYLLHPSPHPN-RNDDIVIYGTGETKF 187 (321)
T ss_dssp H-HHHHHHHHHHHHH-----TCCBEEEECCEEHHH----------------HHHHHHCCCSSCC-TTSCEEEETTSCCEE
T ss_pred H-HHHHHHHHHHHHc-----CCCeEEEEeceeccc----------------ccccccccccccc-ccCceEEecCCCcce
Confidence 9 9999999988642 789999999988875 23333321 11 334677889999999
Q ss_pred cCcceEEeeeccccc
Q psy16545 219 DGTGKVVAIDNFVNS 233 (600)
Q Consensus 219 ~~~~v~d~v~~~~~a 233 (600)
++++++|+++.+..+
T Consensus 188 ~~i~~~Dva~~~~~~ 202 (321)
T 3c1o_A 188 VLNYEEDIAKYTIKV 202 (321)
T ss_dssp EEECHHHHHHHHHHH
T ss_pred eEeeHHHHHHHHHHH
Confidence 999999988766544
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.33 E-value=3.7e-12 Score=126.58 Aligned_cols=150 Identities=17% Similarity=0.160 Sum_probs=111.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTHD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~ 66 (600)
-|||+++.+|+.+++.. ...+.+++..+|+ .+|+++.+++.+++++ +.+..+
T Consensus 37 lVTGas~GIG~aia~~l--a~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~-----~~~~g~ 109 (275)
T 4imr_A 37 LVTGSSRGIGAAIAEGL--AGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIER-----AEAIAP 109 (275)
T ss_dssp EETTCSSHHHHHHHHHH--HHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHH-----HHHHSC
T ss_pred EEECCCCHHHHHHHHHH--HHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH-----HHHhCC
Confidence 58999999999996532 2223333333332 5799999888885554 333247
Q ss_pred CCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
+|++|||||...... ..+++...+++|+.|+.++++++ ++.+..++|++||...+. +. .+
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~-~~ 177 (275)
T 4imr_A 110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR-----------PK-SV 177 (275)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CC-TT
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------CC-CC
Confidence 999999999764322 23456678999999999999997 344567999999986653 22 45
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+.|+.||.+.+.+++.++.++ .+++++.++||.|..+
T Consensus 178 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 217 (275)
T 4imr_A 178 VTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTD 217 (275)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCc
Confidence 5779999999999999998876 2899999999999877
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.33 E-value=3.6e-12 Score=126.92 Aligned_cols=151 Identities=12% Similarity=0.019 Sum_probs=113.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------------------cccccChHHhhhHH
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------------------EGDIVSMYANTDLA 53 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------------------~~Dl~~~~~~~~~~ 53 (600)
-|||+++.+|+.+++. +...+.+++.+||. .+|++|.+++.+++
T Consensus 15 lVTGas~GIG~a~a~~--la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 92 (277)
T 3tsc_A 15 FITGAARGQGRAHAVR--MAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVV 92 (277)
T ss_dssp EEESTTSHHHHHHHHH--HHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred EEECCccHHHHHHHHH--HHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence 4899999999999653 33334455544441 57999999988865
Q ss_pred hhhhccccccc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cC-CCeEEEecCccccCC
Q psy16545 54 QKELGWSARCT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG-VYQLVFSSSCTVYGE 123 (600)
Q Consensus 54 ~~~~~~~~~~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~r~I~~SS~~vyg~ 123 (600)
++ +.+. .++|++|||||...... ..++++..+++|+.|+.++++++.. .+ -.++|++||...+..
T Consensus 93 ~~-----~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 167 (277)
T 3tsc_A 93 DD-----GVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM 167 (277)
T ss_dssp HH-----HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred HH-----HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC
Confidence 54 3332 26999999999875422 3345677999999999999998643 33 458999999866532
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 124 PQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 124 ~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. ...+.|+.||.+.+.+++.++.++ .+++++.++||.|.++.
T Consensus 168 -----------~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 211 (277)
T 3tsc_A 168 -----------Q-PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPM 211 (277)
T ss_dssp -----------C-SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGG
T ss_pred -----------C-CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCc
Confidence 2 456789999999999999998875 38999999999999884
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.3e-12 Score=126.50 Aligned_cols=148 Identities=17% Similarity=0.119 Sum_probs=96.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+++. +...+.+++.++|+ .+|++|.+++.+++++ +.+. .
T Consensus 13 lITGas~giG~~~a~~--l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g 85 (253)
T 3qiv_A 13 IVTGSGGGIGQAYAEA--LAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADR-----TLAEFG 85 (253)
T ss_dssp EEETTTSHHHHHHHHH--HHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH-----HHHHHS
T ss_pred EEECCCChHHHHHHHH--HHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-----HHHHcC
Confidence 4899999999999553 22233334433433 5899999998886554 3332 2
Q ss_pred CCCEEEEcCcccCc-------ccCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAV-------GESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 66 ~~d~Vih~A~~~~~-------~~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
++|+||||||.... ....+++...+++|+.++.++++++ ++.+.+++|++||...+.
T Consensus 86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------ 153 (253)
T 3qiv_A 86 GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL------------ 153 (253)
T ss_dssp CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred CCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC------------
Confidence 69999999998421 1123456679999999977777765 445667999999987652
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+.|+.||.+.+.+++.++.++ .++++++++||.++++.
T Consensus 154 ---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 195 (253)
T 3qiv_A 154 ---YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEA 195 (253)
T ss_dssp ---------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccc
Confidence 34679999999999999999886 38999999999999985
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.7e-12 Score=127.63 Aligned_cols=152 Identities=13% Similarity=0.032 Sum_probs=109.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
-|||++|++|+++.+.. ...+.+++.++|+ .+|++|.+++.+++++ +.+..
T Consensus 11 lVTGasggiG~~~a~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 83 (258)
T 3afn_B 11 LITGSSQGIGLATARLF--ARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDE-----FVAKF 83 (258)
T ss_dssp EETTCSSHHHHHHHHHH--HHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH-----HHHHH
T ss_pred EEeCCCChHHHHHHHHH--HHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH-----HHHHc
Confidence 58999999999996533 2233344444443 4799999988885543 32222
Q ss_pred -CCCEEEEcCcc-cCcc----cCCCChhhhHHhHHHHHHHHHHHHHH----cC--C---CeEEEecCccccCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAV-KAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HG--V---YQLVFSSSCTVYGEPQFLPIT 130 (600)
Q Consensus 66 -~~d~Vih~A~~-~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~---~r~I~~SS~~vyg~~~~~~~~ 130 (600)
++|+||||||. .... ...+++...+++|+.++.++++++.+ .+ . +++|++||...+..
T Consensus 84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------- 156 (258)
T 3afn_B 84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG------- 156 (258)
T ss_dssp SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC-------
T ss_pred CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC-------
Confidence 69999999997 3211 12234566899999999999987643 22 2 68999999865531
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 131 E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+. .+.++|+.||.+.+.+++.++.++ .+++++++|||.++++.
T Consensus 157 ---~~-~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~ 201 (258)
T 3afn_B 157 ---GG-PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAF 201 (258)
T ss_dssp ---CC-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGG
T ss_pred ---CC-CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccc
Confidence 12 466899999999999999988764 38999999999999985
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=4.8e-12 Score=127.19 Aligned_cols=151 Identities=11% Similarity=-0.022 Sum_probs=113.8
Q ss_pred cCCCCcc--hHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGT--SVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g--~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++| .+|+.+++.. ...+.+++..+|+ .+|++|.+++.+++++ +.+.
T Consensus 34 lVTGasg~~GIG~~ia~~l--a~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~ 106 (296)
T 3k31_A 34 VIIGVANDKSLAWGIAKAV--CAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKV-----LAEEW 106 (296)
T ss_dssp EEECCCSTTSHHHHHHHHH--HHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEEeCCCCCCHHHHHHHHH--HHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHH-----HHHHc
Confidence 4899986 7999886532 2233344433333 5899999999886655 3332
Q ss_pred CCCCEEEEcCcccCc--------ccCCCChhhhHHhHHHHHHHHHHHHHHcC--CCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAV--------GESMQEPLMYYKNNLIATINLLEVMKSHG--VYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
.++|++|||||.... ....+++...+++|+.++.++++++...- ..++|++||...+. +
T Consensus 107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~-----------~ 175 (296)
T 3k31_A 107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK-----------V 175 (296)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS-----------C
T ss_pred CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc-----------C
Confidence 269999999998642 22335677799999999999999997642 34899999986553 2
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. ...+.|+.||.+.+.+++.++.++ .++++++++||.|.++.
T Consensus 176 ~-~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 219 (296)
T 3k31_A 176 V-PHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLA 219 (296)
T ss_dssp C-TTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSS
T ss_pred C-CCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCch
Confidence 2 456899999999999999998876 38999999999999985
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.32 E-value=3.1e-12 Score=124.04 Aligned_cols=151 Identities=15% Similarity=0.049 Sum_probs=110.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||++|.+|+.+++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .++|
T Consensus 7 lVTGas~GIG~a~a~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~~g~id 79 (235)
T 3l6e_A 7 IVTGAGSGLGRALTIGL--VERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAA-----AVEWGGLPE 79 (235)
T ss_dssp EEESTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHH-----HHHHHCSCS
T ss_pred EEECCCCHHHHHHHHHH--HHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHH-----HHHhcCCCc
Confidence 38999999999996532 2333444444443 5899999998886554 3322 2699
Q ss_pred EEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 69 CVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 69 ~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
++|||||..... ...+++...+++|+.|+.++++++... .-.++|++||...+.. . ...+.
T Consensus 80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~-----------~-~~~~~ 147 (235)
T 3l6e_A 80 LVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVG-----------K-ANESL 147 (235)
T ss_dssp EEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSS-----------C-SSHHH
T ss_pred EEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCC-----------C-CCCcH
Confidence 999999986432 233556779999999999999998542 1138999999754431 2 45578
Q ss_pred HHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 142 YGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
|+.||.+.+.+++.++.++ .+++++.++||.|-.+.
T Consensus 148 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 185 (235)
T 3l6e_A 148 YCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEF 185 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcc
Confidence 9999999999999999876 37999999999998774
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.32 E-value=3.4e-12 Score=127.16 Aligned_cols=149 Identities=13% Similarity=0.018 Sum_probs=107.0
Q ss_pred cCCCCcchHHHHHHHhhhccC------------------------CCccEEecccccccccChHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
-|||++|.+|+.+.+.....+ .++.++ .+|++|.+++.+++++ +.+
T Consensus 38 lITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~-----~~~ 107 (279)
T 3ctm_A 38 SVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAY-----KCNISDPKSVEETISQ-----QEK 107 (279)
T ss_dssp EETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEE-----ECCTTCHHHHHHHHHH-----HHH
T ss_pred EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEE-----EeecCCHHHHHHHHHH-----HHH
Confidence 589999999999865322111 123445 6899999988885443 222
Q ss_pred c-CCCCEEEEcCcccCc------ccCCCChhhhHHhHHHHH----HHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCC
Q psy16545 64 T-HDIDCVIHFAAVKAV------GESMQEPLMYYKNNLIAT----INLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITED 132 (600)
Q Consensus 64 ~-~~~d~Vih~A~~~~~------~~~~~~~~~~~~~Nv~gt----~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~ 132 (600)
. ..+|+|||+||.... ....+++...+++|+.++ ..+++.+++.+.++||++||...+..
T Consensus 108 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--------- 178 (279)
T 3ctm_A 108 DFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV--------- 178 (279)
T ss_dssp HHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---------
T ss_pred HhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC---------
Confidence 1 259999999998643 112234566899999995 55566667777789999999865421
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+. .+.+.|+.||.+.+.+++.++.++ .+ ++++++||.+.++.
T Consensus 179 ~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~ 223 (279)
T 3ctm_A 179 NIP-QLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDI 223 (279)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTT
T ss_pred CCC-CCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccc
Confidence 012 456889999999999999998875 26 99999999999885
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.32 E-value=3.4e-12 Score=124.97 Aligned_cols=146 Identities=14% Similarity=0.054 Sum_probs=107.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccccc------------ccccChHHhhhHHhhhhcccccccCCCCEEEEcCc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE------------GDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAA 75 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~------------~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~ 75 (600)
-|||++|.+|+.+++. +...+.+++.++|+. +|+ .+++.+++++ +. ++|+||||||
T Consensus 23 lVTGas~gIG~~~a~~--l~~~G~~V~~~~r~~~~~~~~~~~~~~~D~--~~~~~~~~~~------~~--~iD~lv~~Ag 90 (249)
T 1o5i_A 23 LVLAASRGIGRAVADV--LSQEGAEVTICARNEELLKRSGHRYVVCDL--RKDLDLLFEK------VK--EVDILVLNAG 90 (249)
T ss_dssp EEESCSSHHHHHHHHH--HHHTTCEEEEEESCHHHHHHTCSEEEECCT--TTCHHHHHHH------SC--CCSEEEECCC
T ss_pred EEECCCCHHHHHHHHH--HHHCCCEEEEEcCCHHHHHhhCCeEEEeeH--HHHHHHHHHH------hc--CCCEEEECCC
Confidence 4899999999999663 334456676666653 566 3344442222 22 7999999999
Q ss_pred ccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHH
Q psy16545 76 VKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKH 147 (600)
Q Consensus 76 ~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~ 147 (600)
...... ..+++...+++|+.++.++++++ ++.+.+++|++||...+.. . .+...|+.||.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~~~Y~~sK~ 158 (249)
T 1o5i_A 91 GPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP-----------I-ENLYTSNSARM 158 (249)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------C-TTBHHHHHHHH
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCC-----------C-CCCchHHHHHH
Confidence 764321 23456678999999988776554 5556789999999877642 2 45688999999
Q ss_pred HHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 148 FIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 148 ~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.+.+++.++.+. .+++++++|||.+.++.
T Consensus 159 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 190 (249)
T 1o5i_A 159 ALTGFLKTLSFEVAPYGITVNCVAPGWTETER 190 (249)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCCCccCc
Confidence 9999999988764 38999999999999984
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=3e-12 Score=127.45 Aligned_cols=150 Identities=16% Similarity=0.072 Sum_probs=112.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||+++.+|+.+++ .+...+.+++..+|+ .+|++|.+++.+++++ +.+.
T Consensus 31 lVTGas~GIG~aia~--~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~ 103 (277)
T 4fc7_A 31 FITGGGSGIGFRIAE--IFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQ-----ALKEF 103 (277)
T ss_dssp EEETTTSHHHHHHHH--HHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEeCCCchHHHHHHH--HHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH-----HHHHc
Confidence 589999999999955 333334444444443 5799999998886554 3332
Q ss_pred CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+||||||..... ...+++...+++|+.|+.++++++.. .+..++|++||...+.. .
T Consensus 104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~- 171 (277)
T 4fc7_A 104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRG-----------Q- 171 (277)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHT-----------C-
T ss_pred CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC-----------C-
Confidence 2699999999975432 23345677999999999999998743 34469999999865431 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.....|+.||.+.+.+++.++.++ .+++++.++||.|.++
T Consensus 172 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 213 (277)
T 4fc7_A 172 ALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGT 213 (277)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSS
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecc
Confidence 456899999999999999998875 3899999999999987
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.32 E-value=8.7e-12 Score=120.46 Aligned_cols=148 Identities=16% Similarity=0.123 Sum_probs=108.3
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccCCCCEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTHDIDCV 70 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~V 70 (600)
|||++|.+|+.+++.. ...+.+++.++|+ .+|+++.+++.+++++ +.+ ..|+|
T Consensus 6 VTGas~gIG~~~a~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~--~~d~l 76 (230)
T 3guy_A 6 ITGASSGLGAELAKLY--DAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQ-----LDS--IPSTV 76 (230)
T ss_dssp EESTTSHHHHHHHHHH--HHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHS-----CSS--CCSEE
T ss_pred EecCCchHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHH-----Hhh--cCCEE
Confidence 7999999999996533 2233344444443 5799999999885554 332 35999
Q ss_pred EEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHcC---CCeEEEecCccccCCCCCCCCCCCCCCCCCCChHH
Q psy16545 71 IHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHG---VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYG 143 (600)
Q Consensus 71 ih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~ 143 (600)
|||||...... ..+++...+++|+.++.++++++...- ..++|++||...+.. . .+.+.|+
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~-----------~-~~~~~Y~ 144 (230)
T 3guy_A 77 VHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP-----------K-AQESTYC 144 (230)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC-----------C-TTCHHHH
T ss_pred EEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC-----------C-CCCchhH
Confidence 99999764322 234566789999999999999986541 238999999866532 2 4668999
Q ss_pred HHHHHHHHHHHHHHhhcC--CceEEEEecccccCCC
Q psy16545 144 KTKHFIEEMLKDLSKAHK--EWNIISLRYFNPVGAH 177 (600)
Q Consensus 144 ~sK~~~e~~~~~~~~~~~--~~~~~ilR~~~v~G~~ 177 (600)
.||.+.+.+++.++.++. +++++.++||.+..+.
T Consensus 145 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 180 (230)
T 3guy_A 145 AVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEF 180 (230)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChH
Confidence 999999999999998863 8999999999998773
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.32 E-value=4.4e-12 Score=125.90 Aligned_cols=149 Identities=13% Similarity=0.040 Sum_probs=108.6
Q ss_pred cCCCCcchHHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
-|||++|.+|+.+++.....+ .++.++ .+|++|.+++.+++++ +.
T Consensus 30 lITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~~~~~v~~~~~~-----~~ 99 (272)
T 4e3z_A 30 LVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAI-----PGDVGNAADIAAMFSA-----VD 99 (272)
T ss_dssp EETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEE-----ECCTTCHHHHHHHHHH-----HH
T ss_pred EEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEE-----EcCCCCHHHHHHHHHH-----HH
Confidence 589999999999965322111 123444 6899999998886554 33
Q ss_pred cc-CCCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHHc-------CCCeEEEecCccccCCCCCCCC
Q psy16545 63 CT-HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSH-------GVYQLVFSSSCTVYGEPQFLPI 129 (600)
Q Consensus 63 ~~-~~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~-------~~~r~I~~SS~~vyg~~~~~~~ 129 (600)
+. .++|+||||||...... ..+++...+++|+.|+.++++++.+. +.++||++||...+..
T Consensus 100 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------ 173 (272)
T 4e3z_A 100 RQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG------ 173 (272)
T ss_dssp HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHC------
T ss_pred HhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccC------
Confidence 22 26999999999865322 33456779999999999999988653 3458999999866432
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 130 TEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 130 ~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.. .....|+.||.+.+.+++.++.++ .++++++++||.|.++.
T Consensus 174 ----~~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 218 (272)
T 4e3z_A 174 ----SA-TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDL 218 (272)
T ss_dssp ----CT-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred ----CC-CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCc
Confidence 11 245779999999999999998775 28999999999999985
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.32 E-value=3.5e-12 Score=127.76 Aligned_cols=151 Identities=10% Similarity=0.021 Sum_probs=109.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccC----hHHhhhHHhhhhccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVS----MYANTDLAQKELGWS 60 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~----~~~~~~~~~~~~~~~ 60 (600)
-|||++|.+|+.+++... ..+.+++.++|+ .+|+++ .+++.+++++
T Consensus 27 lVTGas~gIG~aia~~L~--~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~----- 99 (288)
T 2x9g_A 27 VVTGAAKRIGRAIAVKLH--QTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS----- 99 (288)
T ss_dssp EETTCSSHHHHHHHHHHH--HHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH-----
T ss_pred EEeCCCCHHHHHHHHHHH--HCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH-----
Confidence 589999999999865322 122223322222 589999 8888775544
Q ss_pred cccc-CCCCEEEEcCcccCccc--------------CCCChhhhHHhHHHHHHHHHHHHHHc----C------CCeEEEe
Q psy16545 61 ARCT-HDIDCVIHFAAVKAVGE--------------SMQEPLMYYKNNLIATINLLEVMKSH----G------VYQLVFS 115 (600)
Q Consensus 61 ~~~~-~~~d~Vih~A~~~~~~~--------------~~~~~~~~~~~Nv~gt~~ll~a~~~~----~------~~r~I~~ 115 (600)
+.+. .++|+||||||...... ...++...+++|+.++.++++++... + ..++|++
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i 179 (288)
T 2x9g_A 100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL 179 (288)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence 3322 26999999999864321 12335568999999999999988543 2 4589999
Q ss_pred cCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 116 SSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 116 SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
||...+. +. .+.+.|+.||.+.+.+++.++.++ .++++++++||.|+++.
T Consensus 180 sS~~~~~-----------~~-~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 231 (288)
T 2x9g_A 180 CDAMVDQ-----------PC-MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV 231 (288)
T ss_dssp CCTTTTS-----------CC-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred ecccccC-----------CC-CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence 9986653 22 456889999999999999998775 38999999999999985
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.32 E-value=3e-12 Score=125.12 Aligned_cols=151 Identities=12% Similarity=0.017 Sum_probs=109.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccc-c---------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEAR-R---------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~-~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+.+.+... ..+.+++.++| + .+|++|++++.+++++ +.+.
T Consensus 8 lVTGas~giG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 80 (246)
T 2uvd_A 8 LVTGASRGIGRAIAIDLA--KQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQ-----TVDVF 80 (246)
T ss_dssp EETTCSSHHHHHHHHHHH--HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEECCCcHHHHHHHHHHH--HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH-----HHHHc
Confidence 489999999999965322 22333333333 1 5799999988885554 3222
Q ss_pred CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+||||||..... ...+++...+++|+.++.++++++. +.+.+++|++||...+.. .
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~- 148 (246)
T 2uvd_A 81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTG-----------N- 148 (246)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-----------C-
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCC-----------C-
Confidence 2699999999986432 1234566799999999888877753 456689999999865421 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
++.+.|+.||.+.+.+++.++.+. .++++++++||.+.++.
T Consensus 149 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 191 (246)
T 2uvd_A 149 PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDM 191 (246)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGC
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcc
Confidence 356789999999999999888764 38999999999998875
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=6.8e-12 Score=125.08 Aligned_cols=151 Identities=12% Similarity=-0.029 Sum_probs=112.8
Q ss_pred cCCCCcch--HHHHHHHhhhccCCCccEEecccc-------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTS--VLQLLRTFERVTGKPVPYIVEARR-------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~--~~~~l~~~~~~~~~~~~~~~~~~~-------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|+ +|+.+++.. ...+.+++.++|+ .+|+++.+++.+++++ +.+. .
T Consensus 30 lVTGasg~~GIG~~ia~~l--~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~-----~~~~~g 102 (280)
T 3nrc_A 30 LITGLLSNKSIAYGIAKAM--HREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVE-----LGKVWD 102 (280)
T ss_dssp EECCCCSTTCHHHHHHHHH--HHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHH-----HHHHCS
T ss_pred EEECCCCCCCHHHHHHHHH--HHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHH-----HHHHcC
Confidence 48998866 999886532 2223334433333 5899999998886655 3332 2
Q ss_pred CCCEEEEcCcccCcc---------cCCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVG---------ESMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~---------~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
++|+||||||..... ...+++...+++|+.++.++++++... ...++|++||...+.
T Consensus 103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------- 171 (280)
T 3nrc_A 103 GLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEK----------- 171 (280)
T ss_dssp SCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTS-----------
T ss_pred CCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccccc-----------
Confidence 699999999986531 233456679999999999999998653 346999999986553
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+. .+.+.|+.||.+.+.+++.++.+. .++++++++||.|..+.
T Consensus 172 ~~-~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 216 (280)
T 3nrc_A 172 AM-PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLA 216 (280)
T ss_dssp CC-TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSG
T ss_pred CC-CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchh
Confidence 22 456899999999999999998775 38999999999999885
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.32 E-value=6.1e-12 Score=123.82 Aligned_cols=146 Identities=11% Similarity=0.082 Sum_probs=109.3
Q ss_pred CCCCcchHHHHHHHhhhcc--------------------------CCCccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVT--------------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~--------------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
|||++|.+|+.+.+..... +.++.++ .+|++|.+++.+++++ +.
T Consensus 7 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dv~~~~~v~~~~~~-----~~ 76 (258)
T 3a28_C 7 VTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFV-----GLDVTDKANFDSAIDE-----AA 76 (258)
T ss_dssp EETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEE-----ECCTTCHHHHHHHHHH-----HH
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEE-----EccCCCHHHHHHHHHH-----HH
Confidence 7999999999885422111 1234455 6899999988885554 33
Q ss_pred ccC-CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCC-CeEEEecCccccCCCCCCCCCCC
Q psy16545 63 CTH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGV-YQLVFSSSCTVYGEPQFLPITED 132 (600)
Q Consensus 63 ~~~-~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~-~r~I~~SS~~vyg~~~~~~~~E~ 132 (600)
+.. ++|+||||||...... ..+++...+++|+.++.++++++.+ .+. +++|++||...+..
T Consensus 77 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------- 147 (258)
T 3a28_C 77 EKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQG--------- 147 (258)
T ss_dssp HHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSC---------
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccC---------
Confidence 222 6999999999864321 2345667999999999999998765 355 79999999865532
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
. .+.+.|+.||.+.+.+++.++.++ .++++++++||.+.++
T Consensus 148 --~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 190 (258)
T 3a28_C 148 --F-PILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTG 190 (258)
T ss_dssp --C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSH
T ss_pred --C-CCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCCh
Confidence 2 456899999999999999998775 3899999999999876
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=6.3e-12 Score=126.15 Aligned_cols=151 Identities=9% Similarity=-0.048 Sum_probs=112.1
Q ss_pred cCCCCcch--HHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 8 LGTGQGTS--VLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 8 ~vtG~~g~--~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
-|||++|. +|+.+++.. ...+.+++..+|+ .+|++|.+++.+++++ +.+..
T Consensus 35 lVTGasg~~GIG~aia~~l--a~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~ 107 (293)
T 3grk_A 35 LILGVANNRSIAWGIAKAA--REAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFET-----LEKKW 107 (293)
T ss_dssp EEECCCSSSSHHHHHHHHH--HHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHH-----HHHHT
T ss_pred EEEcCCCCCcHHHHHHHHH--HHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHH-----HHHhc
Confidence 58999977 999886532 2223333333333 5899999999886655 43332
Q ss_pred -CCCEEEEcCcccCc--------ccCCCChhhhHHhHHHHHHHHHHHHHHcC--CCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAV--------GESMQEPLMYYKNNLIATINLLEVMKSHG--VYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 66 -~~d~Vih~A~~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
++|++|||||.... ....+++...+++|+.++.++++++...- ..++|++||...+..
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~----------- 176 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV----------- 176 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB-----------
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC-----------
Confidence 69999999998642 22234566799999999999999987642 358999999866532
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. ...+.|+.||.+.+.+++.++.++ .++++++++||.|.++.
T Consensus 177 ~-~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 220 (293)
T 3grk_A 177 M-PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLA 220 (293)
T ss_dssp C-TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred C-CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchh
Confidence 2 456899999999999999998875 38999999999999875
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=3.4e-12 Score=126.16 Aligned_cols=150 Identities=9% Similarity=0.007 Sum_probs=110.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||+++.+|+.+++... ..+.+++..+|+ .+|++|.+++.+++++ +.+.
T Consensus 12 lVTGas~GIG~aia~~l~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~ 84 (265)
T 3lf2_A 12 VVTGGSSGIGLATVELLL--EAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEA-----CERT 84 (265)
T ss_dssp EEETCSSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH-----HHHH
T ss_pred EEeCCCChHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHH-----HHHH
Confidence 589999999999854322 222223322222 5899999998886554 3332
Q ss_pred -CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
.++|++|||||...... ..+++...+++|+.++.++++++.. .+..++|++||...+. +.
T Consensus 85 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 153 (265)
T 3lf2_A 85 LGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ-----------PE 153 (265)
T ss_dssp HCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTS-----------CC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCC-----------CC
Confidence 26999999999864322 2345667999999999999999854 3456899999976543 22
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
...+.|+.||.+.+.+++.++.++ .|++++.++||.|.+|
T Consensus 154 -~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 195 (265)
T 3lf2_A 154 -PHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESG 195 (265)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred -CCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCc
Confidence 456899999999999999998876 2899999999999887
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.31 E-value=3.7e-12 Score=125.93 Aligned_cols=151 Identities=15% Similarity=0.033 Sum_probs=106.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||++|.+|+++++... ..+..++..+++ .+|++|.+++.+++++ +.+. .++|
T Consensus 31 lVTGas~gIG~aia~~la--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g~iD 103 (266)
T 3grp_A 31 LVTGATGGIGEAIARCFH--AQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEV-----AEREMEGID 103 (266)
T ss_dssp EESSTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHH-----HHHHHTSCC
T ss_pred EEeCCCcHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHH-----HHHHcCCCC
Confidence 589999999999965322 222233322222 6899999998885554 3322 2699
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+||||||...... ..+++...+++|+.|+.++++++ ++.+.+++|++||...+.. . .+.+
T Consensus 104 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~-----------~-~~~~ 171 (266)
T 3grp_A 104 ILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVG-----------N-PGQT 171 (266)
T ss_dssp EEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------------------CHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCC-----------C-CCch
Confidence 9999999864322 23456778999999988877765 4456679999999755421 1 4568
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.|+.||.+.+.+++.++.++ .++++++++||.|.++.
T Consensus 172 ~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~ 210 (266)
T 3grp_A 172 NYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAM 210 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCch
Confidence 89999999999999998875 38999999999999874
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=5.8e-12 Score=123.78 Aligned_cols=151 Identities=13% Similarity=0.034 Sum_probs=111.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccc-c---------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEAR-R---------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~-~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
-|||++|.+|+.+++.. ...+..++..++ + .+|++|.+++.+++++ +.+..
T Consensus 17 lITGas~giG~~ia~~l--~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~ 89 (256)
T 3ezl_A 17 YVTGGMGGIGTSICQRL--HKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDK-----VKAEV 89 (256)
T ss_dssp EETTTTSHHHHHHHHHH--HHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH-----HHHHT
T ss_pred EEECCCChHHHHHHHHH--HHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHH-----HHHhc
Confidence 48999999999996532 222333332220 0 6899999988886554 33322
Q ss_pred -CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 -~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|+||||||...... ..+++...+++|+.++.++++++ ++.+..++|++||...+. +.
T Consensus 90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~- 157 (256)
T 3ezl_A 90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK-----------GQ- 157 (256)
T ss_dssp CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG-----------SC-
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcc-----------CC-
Confidence 6999999999875321 23456679999999999988776 445667999999976543 22
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.+. .++++++++||.+.++.
T Consensus 158 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 200 (256)
T 3ezl_A 158 FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM 200 (256)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcc
Confidence 467899999999999999998774 38999999999998874
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.31 E-value=8.1e-12 Score=124.20 Aligned_cols=153 Identities=13% Similarity=0.039 Sum_probs=112.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+++.. ...+.+++..+|+ .+|++|.+++.+++++ +.+. .
T Consensus 36 lVTGas~GIG~aia~~l--a~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~~~~g 108 (276)
T 3r1i_A 36 LITGASTGIGKKVALAY--AEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQ-----MTGELG 108 (276)
T ss_dssp EEESTTSHHHHHHHHHH--HHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH-----HHHHHS
T ss_pred EEeCCCCHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH-----HHHHcC
Confidence 58999999999996532 2223333333332 6899999998886654 3332 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cC-CCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG-VYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|+||||||...... ..++++..+++|+.|+.++++++.+ .+ -.++|++||...+... +.
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~---------~~- 178 (276)
T 3r1i_A 109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN---------IP- 178 (276)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------CS-
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC---------CC-
Confidence 6999999999875422 2345666889999999999998754 23 2689999997654321 11
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .+++++.++||.|..+.
T Consensus 179 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 221 (276)
T 3r1i_A 179 QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTEL 221 (276)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTT
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCc
Confidence 356889999999999999999875 38999999999999885
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.31 E-value=1.6e-12 Score=129.00 Aligned_cols=151 Identities=13% Similarity=-0.000 Sum_probs=109.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+. .
T Consensus 35 lITGasggIG~~la~~L~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~-----~~~~~g 107 (272)
T 1yb1_A 35 LITGAGHGIGRLTAYEFA--KLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKK-----VKAEIG 107 (272)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHTC
T ss_pred EEECCCchHHHHHHHHHH--HCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHH-----HHHHCC
Confidence 589999999999955322 112222222221 6899999988885554 3222 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|+||||||...... ..+++...+++|+.++.++++++. +.+.++||++||...+.. . .
T Consensus 108 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~-~ 175 (272)
T 1yb1_A 108 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS-----------V-P 175 (272)
T ss_dssp CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC-----------H-H
T ss_pred CCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-----------C-C
Confidence 6999999999864322 123456789999999888877764 456789999999876542 1 3
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc-----CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH-----KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~-----~~~~~~ilR~~~v~G~~ 177 (600)
+.+.|+.||.+.+.+++.++.++ .+++++++|||.+.++.
T Consensus 176 ~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~ 220 (272)
T 1yb1_A 176 FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF 220 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCS
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCc
Confidence 45789999999999999988764 38999999999999885
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=3.3e-12 Score=126.66 Aligned_cols=163 Identities=15% Similarity=-0.007 Sum_probs=112.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|++|+.+.+..... .+.+++.++|+ .+|+++.+++.+++++ +.+. .
T Consensus 8 lITGasggIG~~~a~~L~~~-~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~~~g 81 (276)
T 1wma_A 8 LVTGGNKGIGLAIVRDLCRL-FSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDF-----LRKEYG 81 (276)
T ss_dssp EESSCSSHHHHHHHHHHHHH-SSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH-----HHHHHS
T ss_pred EEeCCCcHHHHHHHHHHHHh-cCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHH-----HHHhcC
Confidence 48999999999996532220 22233333332 6899999988885544 2222 2
Q ss_pred CCCEEEEcCcccCcccC----CCChhhhHHhHHHHHHHHHHHHHHcC--CCeEEEecCccccCC-CC----------CCC
Q psy16545 66 DIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMKSHG--VYQLVFSSSCTVYGE-PQ----------FLP 128 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~r~I~~SS~~vyg~-~~----------~~~ 128 (600)
++|+||||||....... ..++...+++|+.|+.++++++.+.. .++||++||...+.. .. ..+
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~ 161 (276)
T 1wma_A 82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSET 161 (276)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccc
Confidence 69999999998643221 13456789999999999999998752 248999999866521 00 011
Q ss_pred CCCCC-------------------CCCCCCChHHHHHHHHHHHHHHHHhhc------CCceEEEEecccccCCC
Q psy16545 129 ITEDH-------------------PTGNIKNVYGKTKHFIEEMLKDLSKAH------KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 129 ~~E~~-------------------~~~~p~s~Y~~sK~~~e~~~~~~~~~~------~~~~~~ilR~~~v~G~~ 177 (600)
++|++ +. .|.+.|+.||.+.+.+++.++.++ .++++++++||.|.++.
T Consensus 162 ~~e~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~ 234 (276)
T 1wma_A 162 ITEEELVGLMNKFVEDTKKGVHQKEG-WPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234 (276)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCTTTTT-CCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred cchhhhhhhhhhhhhhhcccccccCC-CccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCc
Confidence 22221 12 345899999999999999888764 38999999999999885
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.30 E-value=1.6e-12 Score=128.36 Aligned_cols=150 Identities=15% Similarity=0.028 Sum_probs=111.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||++|.+|+.+.+.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .++|
T Consensus 10 lITGas~gIG~aia~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~~g~iD 82 (263)
T 2a4k_A 10 LVTGAASGIGRAALDLF--AREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAE-----ALEEFGRLH 82 (263)
T ss_dssp EEESTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHH-----HHHHHSCCC
T ss_pred EEECCCCHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHH-----HHHHcCCCc
Confidence 58999999999996532 2223333333332 5899999998885554 3322 2689
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHcC--CCeEEEecCccccCCCCCCCCCCCCCCCCCCChH
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHG--VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVY 142 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y 142 (600)
+||||||...... ..+++...+++|+.++.++++++...- .+++|++||...++. .+.+.|
T Consensus 83 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------------~~~~~Y 149 (263)
T 2a4k_A 83 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA-------------FGLAHY 149 (263)
T ss_dssp EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH-------------HHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCC-------------CCcHHH
Confidence 9999999864322 223456789999999999999987642 359999999876631 345789
Q ss_pred HHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 143 GKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 143 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.||.+.+.+++.++.+. .++++++++||.+.++.
T Consensus 150 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 186 (263)
T 2a4k_A 150 AAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM 186 (263)
T ss_dssp HHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGG
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCch
Confidence 999999999999988775 38999999999999884
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.2e-11 Score=122.25 Aligned_cols=148 Identities=11% Similarity=-0.039 Sum_probs=109.1
Q ss_pred cCCCCcc-hHHHHHHHhhhcc-------------------------CCCccEEecccccccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGT-SVLQLLRTFERVT-------------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g-~~~~~l~~~~~~~-------------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
-|||++| .+|+.+++..... ..++.++ .+|++|.+++.+++++ +
T Consensus 26 lITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-----~~Dl~~~~~v~~~~~~-----~ 95 (266)
T 3o38_A 26 LVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAV-----VCDVTSTEAVDALITQ-----T 95 (266)
T ss_dssp EESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEE-----ECCTTCHHHHHHHHHH-----H
T ss_pred EEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEE-----EeCCCCHHHHHHHHHH-----H
Confidence 5899976 4998885422111 1245555 7899999998885554 3
Q ss_pred ccc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc-----CCCeEEEecCccccCCCCCCCCCC
Q psy16545 62 RCT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH-----GVYQLVFSSSCTVYGEPQFLPITE 131 (600)
Q Consensus 62 ~~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~-----~~~r~I~~SS~~vyg~~~~~~~~E 131 (600)
.+. .++|+||||||...... ..+++...+++|+.++.++++++... +..++|++||...+.
T Consensus 96 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--------- 166 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR--------- 166 (266)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC---------
T ss_pred HHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC---------
Confidence 322 26999999999864322 23456678999999999999998653 456899999976543
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 132 DHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 132 ~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+. .+.+.|+.||.+.+.+++.++.++ .++++++++||.+.++.
T Consensus 167 --~~-~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 211 (266)
T 3o38_A 167 --AQ-HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKF 211 (266)
T ss_dssp --CC-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred --CC-CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchh
Confidence 22 467899999999999999998774 38999999999999874
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.30 E-value=4.6e-12 Score=125.03 Aligned_cols=150 Identities=13% Similarity=0.024 Sum_probs=109.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|+++.+++.+++++ +.+..
T Consensus 11 lVTGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g 83 (262)
T 1zem_A 11 LVTGAGGNIGLATALRLA--EEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDS-----VVRDFG 83 (262)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHH-----HHHHHS
T ss_pred EEeCCCcHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-----HHHHhC
Confidence 589999999999855322 222333333322 6899999988885554 33322
Q ss_pred CCCEEEEcCccc-Ccc----cCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVK-AVG----ESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~-~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|+||||||.. ... ...+++...+++|+.++.++++++.+ .+.+++|++||...+.. .
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~- 151 (262)
T 1zem_A 84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG-----------P- 151 (262)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC-----------C-
T ss_pred CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----------C-
Confidence 699999999975 221 12345677899999999999988754 35679999999765532 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+.+.|+.||.+.+.+++.++.+. .++++++++||.+..+
T Consensus 152 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (262)
T 1zem_A 152 PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 193 (262)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence 345789999999999999988764 3899999999998776
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=9e-13 Score=133.98 Aligned_cols=163 Identities=13% Similarity=0.088 Sum_probs=116.7
Q ss_pred cCCCCcchHHHHHHHhhhccC----------------------CCccEEecccccccccChHHhhhHHhhhhcccccccC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG----------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~----------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
.|||++|++|+++.+.....+ .+++++ .+|+.|.+++.+ +++
T Consensus 15 lVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v-----~~Dl~d~~~l~~---------a~~-- 78 (318)
T 2r6j_A 15 LIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIV-----KGELDEHEKLVE---------LMK-- 78 (318)
T ss_dssp EEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEE-----ECCTTCHHHHHH---------HHT--
T ss_pred EEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEE-----EecCCCHHHHHH---------HHc--
Confidence 589999999999855322111 134445 679999998888 776
Q ss_pred CCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcC-CCeEEEecCccccCCCCCCCCCCCCCCCCC-CChHH
Q psy16545 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSCTVYGEPQFLPITEDHPTGNI-KNVYG 143 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p-~s~Y~ 143 (600)
++|+|||+|+... +.++.+++++|++.+ +++||+ |+ ||.. .+|..+. .| .+.|
T Consensus 79 ~~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~----~~~~~~~-~p~~~~y- 133 (318)
T 2r6j_A 79 KVDVVISALAFPQ---------------ILDQFKILEAIKVAGNIKRFLP-SD---FGVE----EDRINAL-PPFEALI- 133 (318)
T ss_dssp TCSEEEECCCGGG---------------STTHHHHHHHHHHHCCCCEEEC-SC---CSSC----TTTCCCC-HHHHHHH-
T ss_pred CCCEEEECCchhh---------------hHHHHHHHHHHHhcCCCCEEEe-ec---cccC----cccccCC-CCcchhH-
Confidence 7999999998642 345789999999998 999884 43 5531 2333343 33 3568
Q ss_pred HHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcce
Q psy16545 144 KTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGK 223 (600)
Q Consensus 144 ~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v 223 (600)
.+|..+|++++. . +++++++||+.+++. +++.+.+... ..+.+.++++|.+.++++++
T Consensus 134 ~sK~~~e~~~~~----~-~~~~~~lr~~~~~~~----------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~ 191 (318)
T 2r6j_A 134 ERKRMIRRAIEE----A-NIPYTYVSANCFASY----------------FINYLLRPYD-PKDEITVYGTGEAKFAMNYE 191 (318)
T ss_dssp HHHHHHHHHHHH----T-TCCBEEEECCEEHHH----------------HHHHHHCTTC-CCSEEEEETTSCCEEEEECH
T ss_pred HHHHHHHHHHHh----c-CCCeEEEEcceehhh----------------hhhhhccccC-CCCceEEecCCCceeeEeeH
Confidence 999999998865 2 889999999877754 3444443322 34577889999999999999
Q ss_pred EEeeeccccc
Q psy16545 224 VVAIDNFVNS 233 (600)
Q Consensus 224 ~d~v~~~~~a 233 (600)
+|+++.+..+
T Consensus 192 ~Dva~~~~~~ 201 (318)
T 2r6j_A 192 QDIGLYTIKV 201 (318)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9988766654
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.30 E-value=6.4e-12 Score=126.60 Aligned_cols=150 Identities=15% Similarity=0.109 Sum_probs=111.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
-|||++|.+|+.+++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+. .
T Consensus 35 lVTGas~gIG~~la~~l--~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~g 107 (301)
T 3tjr_A 35 VVTGGASGIGLATATEF--ARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADE-----AFRLLG 107 (301)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHHS
T ss_pred EEeCCCCHHHHHHHHHH--HHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH-----HHHhCC
Confidence 58999999999995532 2223333333332 6899999998886554 3332 2
Q ss_pred CCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHH----cC-CCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HG-VYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|+||||||..... ...+++...+++|+.|+.++++++.. .+ ..++|++||...+. +.
T Consensus 108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~- 175 (301)
T 3tjr_A 108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV-----------PN- 175 (301)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS-----------CC-
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC-----------CC-
Confidence 699999999986432 22345667999999999999998743 33 46899999986553 22
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+.+.|+.||.+.+.+++.++.++ .|+++++++||.|..+
T Consensus 176 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 217 (301)
T 3tjr_A 176 AGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETK 217 (301)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSS
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccc
Confidence 456899999999999999998775 2799999999999877
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.30 E-value=3.4e-12 Score=129.71 Aligned_cols=151 Identities=15% Similarity=0.027 Sum_probs=107.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
.|||++|.+|+.+++.. ...+.+++..+|+ .+|+++.+++.+++++ +.+.
T Consensus 12 lVTGas~gIG~~la~~l--~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~-----~~~~ 84 (319)
T 3ioy_A 12 FVTGGANGVGIGLVRQL--LNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADE-----VEAR 84 (319)
T ss_dssp EEETTTSTHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHH-----HHHH
T ss_pred EEcCCchHHHHHHHHHH--HHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHH-----HHHh
Confidence 58999999999995532 2223333333332 6799999998886554 3332
Q ss_pred -CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc----------CCCeEEEecCccccCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----------GVYQLVFSSSCTVYGEPQFLPI 129 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----------~~~r~I~~SS~~vyg~~~~~~~ 129 (600)
.++|+||||||...... ..+++...+++|+.|+.++++++... +..+||++||...+..
T Consensus 85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~------ 158 (319)
T 3ioy_A 85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA------ 158 (319)
T ss_dssp TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC------
T ss_pred CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC------
Confidence 26899999999864322 23456679999999999999987543 2457999999876542
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 130 TEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 130 ~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. ...+.|+.||.+.+.+++.++.++ .++++++++||.|.++.
T Consensus 159 -----~-~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 202 (319)
T 3ioy_A 159 -----A-GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYI 202 (319)
T ss_dssp -----C-SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---
T ss_pred -----C-CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCc
Confidence 2 345789999998888888877654 28999999999999874
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1.1e-11 Score=120.18 Aligned_cols=150 Identities=14% Similarity=0.049 Sum_probs=107.3
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-C
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT-H 65 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~ 65 (600)
|||++|.+|+.+++... ..+.+++..+|+ .+|++|.+++.+++++ +.+. .
T Consensus 7 ITGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~~g 79 (235)
T 3l77_A 7 ITGASRGIGEAIARALA--RDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKK-----VLERFG 79 (235)
T ss_dssp EESCSSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC------HHHHHS
T ss_pred EECCCcHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHH-----HHHhcC
Confidence 79999999999855322 222223322322 6899999998884433 2221 2
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
++|++|||||...... ..+++...+++|+.|+.++++++... +..++|++||...+.. . ..
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-----------~-~~ 147 (235)
T 3l77_A 80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL-----------I-PY 147 (235)
T ss_dssp SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC-----------C-TT
T ss_pred CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc-----------C-CC
Confidence 6999999999865432 33456779999999999999998542 2347777777644321 1 34
Q ss_pred CChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~ 177 (600)
.+.|+.||.+.+.+++.+..+.++++++.++||.+..+.
T Consensus 148 ~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~ 186 (235)
T 3l77_A 148 GGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYF 186 (235)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSST
T ss_pred cchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccc
Confidence 578999999999999998766669999999999998875
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.30 E-value=1e-11 Score=121.07 Aligned_cols=150 Identities=11% Similarity=0.007 Sum_probs=109.2
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEec-c--ccc------------ccccChHHhhhHHhhhhcccccccC-CCCEEEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVE-A--RRE------------GDIVSMYANTDLAQKELGWSARCTH-DIDCVIH 72 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~-~--~~~------------~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih 72 (600)
|||++|.+|+.+.+ .+...+.+++.+ + |+. +|+.|.+++.+++++ +.+.. ++|+|||
T Consensus 6 VTGas~gIG~~ia~--~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~g~iD~lv~ 78 (244)
T 1zmo_A 6 VTHARHFAGPAAVE--ALTQDGYTVVCHDASFADAAERQRFESENPGTIALAEQKPERLVDA-----TLQHGEAIDTIVS 78 (244)
T ss_dssp ESSTTSTTHHHHHH--HHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEEECCCCCGGGHHHH-----HGGGSSCEEEEEE
T ss_pred EECCCChHHHHHHH--HHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCcccCHHHHHHHHHH-----HHHHcCCCCEEEE
Confidence 79999999999966 444456677766 4 552 123344445543333 33322 6999999
Q ss_pred cCcccCc---cc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 73 FAAVKAV---GE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 73 ~A~~~~~---~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
|||.... .. ..+++...+++|+.++.++++++. +.+.+++|++||...+.. . .+.+.
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~-~~~~~ 146 (244)
T 1zmo_A 79 NDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKP-----------L-AYNPL 146 (244)
T ss_dssp CCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------C-TTCTT
T ss_pred CCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCC-----------C-CCchH
Confidence 9997643 11 224566799999999999998874 455679999999866542 2 45689
Q ss_pred HHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 142 YGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
|+.||.+.+.+++.++.++ .++++++++||.+..+.
T Consensus 147 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 184 (244)
T 1zmo_A 147 YGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPT 184 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCc
Confidence 9999999999999998775 28999999999998774
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.30 E-value=4e-12 Score=126.73 Aligned_cols=151 Identities=10% Similarity=0.038 Sum_probs=105.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+.+++.. ...+.+++.++++ .+|++|.+++.+++++ +.+.
T Consensus 33 lVTGas~GIG~aia~~l--a~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~ 105 (280)
T 4da9_A 33 IVTGGRRGIGLGIARAL--AASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDA-----VVAEF 105 (280)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHH-----HHHHH
T ss_pred EEecCCCHHHHHHHHHH--HHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-----HHHHc
Confidence 58999999999996532 2233333333321 6799999988886554 3332
Q ss_pred CCCCEEEEcCcccC--c----ccCCCChhhhHHhHHHHHHHHHHHHHHc----C---CCeEEEecCccccCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKA--V----GESMQEPLMYYKNNLIATINLLEVMKSH----G---VYQLVFSSSCTVYGEPQFLPITE 131 (600)
Q Consensus 65 ~~~d~Vih~A~~~~--~----~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~---~~r~I~~SS~~vyg~~~~~~~~E 131 (600)
.++|+||||||... . ....+++...+++|+.|+.++++++... + ..++|++||...+..
T Consensus 106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-------- 177 (280)
T 4da9_A 106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT-------- 177 (280)
T ss_dssp SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------------
T ss_pred CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccC--------
Confidence 26999999999832 1 1133556779999999999999887543 2 458999999765421
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 132 DHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 132 ~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+...|+.||.+.+.+++.++.++ .+++++.++||.|.++.
T Consensus 178 ---~-~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 221 (280)
T 4da9_A 178 ---S-PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDM 221 (280)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred ---C-CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCc
Confidence 2 456889999999999999998875 38999999999999885
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.6e-11 Score=119.65 Aligned_cols=151 Identities=12% Similarity=0.019 Sum_probs=115.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||+++-+|+.+++ ++...+.+++..||+ .+|++|++++++++++ +.++.
T Consensus 13 lVTGas~GIG~aia~--~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~G 85 (255)
T 4g81_D 13 LVTGSARGLGFAYAE--GLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSK-----LDAEGI 85 (255)
T ss_dssp EETTCSSHHHHHHHH--HHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH-----HHHTTC
T ss_pred EEeCCCcHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH-----HHHHCC
Confidence 589999999999854 333344445555544 5899999999887776 55544
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----H-cCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----S-HGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~-~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|++|||||...... +.++++..+++|+.|+..+.+++. + .+-.++|++||...... .
T Consensus 86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~-----------~- 153 (255)
T 4g81_D 86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA-----------R- 153 (255)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB-----------C-
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC-----------C-
Confidence 5999999999864422 335677899999999999998763 2 24468999999765431 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+...+|+.||.+...+++.++.++ .|+++..+.||.|..|.
T Consensus 154 ~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~ 196 (255)
T 4g81_D 154 PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDM 196 (255)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCch
Confidence 345789999999999999999886 38999999999998774
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.29 E-value=1.2e-11 Score=121.21 Aligned_cols=150 Identities=19% Similarity=0.100 Sum_probs=110.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccc--cChHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDI--VSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl--~~~~~~~~~~~~~~~~~~~~ 63 (600)
-|||++|.+|+.+++. +...+.+++.++|+ .+|+ ++.+++.+++++ +.+
T Consensus 16 lVTGas~gIG~aia~~--l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-----~~~ 88 (252)
T 3f1l_A 16 LVTGASDGIGREAAMT--YARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQR-----IAV 88 (252)
T ss_dssp EEESTTSHHHHHHHHH--HHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHH-----HHH
T ss_pred EEeCCCChHHHHHHHH--HHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHH-----HHH
Confidence 4899999999999653 22333344444443 4788 888888775554 333
Q ss_pred cC-CCCEEEEcCcccCcc-----cCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCC
Q psy16545 64 TH-DIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 64 ~~-~~d~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
.. ++|++|||||..... ...+++...+++|+.|+.++++++ ++.+.+++|++||...+.
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------- 157 (252)
T 3f1l_A 89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ----------- 157 (252)
T ss_dssp HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS-----------
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc-----------
Confidence 32 699999999985321 122345678999999999999998 445667999999976543
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhcC-CceEEEEecccccCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAHK-EWNIISLRYFNPVGA 176 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~~-~~~~~ilR~~~v~G~ 176 (600)
+. .+.+.|+.||.+.+.+++.++.++. .++++.+.||.|..+
T Consensus 158 ~~-~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~ 200 (252)
T 3f1l_A 158 GR-ANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA 200 (252)
T ss_dssp CC-TTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH
T ss_pred CC-CCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc
Confidence 12 4568999999999999999998872 489999999988765
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.29 E-value=4.3e-12 Score=124.28 Aligned_cols=150 Identities=15% Similarity=0.057 Sum_probs=106.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------------cccccChHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------------EGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------------~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
-|||++|.+|+.+++... ..+.+++.++|+ .+|++|.+++.+++++ +.+
T Consensus 11 lVTGas~GIG~aia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~ 83 (250)
T 3nyw_A 11 IITGASQGIGAVIAAGLA--TDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD-----IHQ 83 (250)
T ss_dssp EEESTTSHHHHHHHHHHH--HHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH-----HHH
T ss_pred EEECCCcHHHHHHHHHHH--HCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH-----HHH
Confidence 489999999999854322 112222222222 6899999998886554 333
Q ss_pred c-CCCCEEEEcCcccCccc---CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 64 T-HDIDCVIHFAAVKAVGE---SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 64 ~-~~~d~Vih~A~~~~~~~---~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
. .++|++|||||...... ..+++...+++|+.|+.++++++ ++.+..++|++||...+.. .
T Consensus 84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~ 152 (250)
T 3nyw_A 84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYG-----------F 152 (250)
T ss_dssp HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------
T ss_pred hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCC-----------C
Confidence 2 26999999999864322 22445678999999999999987 3445679999999754321 2
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+.+.|+.||.+.+.+++.++.++ .+++++.++||.+..+
T Consensus 153 -~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 194 (250)
T 3nyw_A 153 -ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD 194 (250)
T ss_dssp -CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc
Confidence 457899999999999999998875 3899999999999766
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.29 E-value=1e-11 Score=123.80 Aligned_cols=151 Identities=16% Similarity=0.087 Sum_probs=110.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+++++.. ...+.+++.++|+ .+|++|.+++.+++++ +.+.
T Consensus 37 lVTGas~GIG~aia~~l--a~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~~~ 109 (281)
T 4dry_A 37 LVTGGGTGVGRGIAQAL--SAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAA-----VRAEF 109 (281)
T ss_dssp EETTTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEeCCCCHHHHHHHHHH--HHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHH-----HHHHc
Confidence 48999999999996532 2223333333332 5899999998886554 3332
Q ss_pred CCCCEEEEcCcccCcc-----cCCCChhhhHHhHHHHHHHHHHHHHH----cC--CCeEEEecCccccCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVMKS----HG--VYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~--~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
.++|+||||||..... ...+++...+++|+.|+.++++++.. .+ ..++|++||...+.
T Consensus 110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~----------- 178 (281)
T 4dry_A 110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT----------- 178 (281)
T ss_dssp SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC-----------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC-----------
Confidence 2699999999986431 22345667999999999999888643 32 46899999976542
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+. .+.+.|+.||.+.+.+++.++.++ .+++++.++||.|..+.
T Consensus 179 ~~-~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 223 (281)
T 4dry_A 179 PR-PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDM 223 (281)
T ss_dssp CC-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC--
T ss_pred CC-CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChh
Confidence 22 466899999999999999998774 38999999999998874
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.29 E-value=7.7e-12 Score=123.90 Aligned_cols=151 Identities=13% Similarity=0.046 Sum_probs=112.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+.+++. +...+..++..+++ .+|++|.+++.+++++ +.+.
T Consensus 29 lITGas~gIG~~~a~~--l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~-----~~~~~ 101 (269)
T 3gk3_A 29 FVTGGMGGLGAAISRR--LHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEK-----VLADF 101 (269)
T ss_dssp EETTTTSHHHHHHHHH--HHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEECCCchHHHHHHHH--HHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH-----HHHHc
Confidence 4899999999999553 22333333333311 6899999998886554 3332
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+||||||...... ..+++...+++|+.++.++++++.. .+..++|++||...+.. .
T Consensus 102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~- 169 (269)
T 3gk3_A 102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRG-----------A- 169 (269)
T ss_dssp SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------C-
T ss_pred CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccC-----------C-
Confidence 26999999999874322 2345667899999999999988743 45579999999765431 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .++++++++||.|..+.
T Consensus 170 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 212 (269)
T 3gk3_A 170 FGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAM 212 (269)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchh
Confidence 456899999999999999998775 38999999999999885
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=6.3e-12 Score=123.43 Aligned_cols=151 Identities=10% Similarity=0.006 Sum_probs=108.6
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccccccccc---------------ChHHhhhHHhhhhccccccc-CCCCEEEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIV---------------SMYANTDLAQKELGWSARCT-HDIDCVIH 72 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~Dl~---------------~~~~~~~~~~~~~~~~~~~~-~~~d~Vih 72 (600)
|||++|.+|+.+++ .+...+.+++.++|+...+. |.+++.+++++ +.+. .++|+|||
T Consensus 6 VTGas~gIG~~ia~--~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~-----~~~~~g~iD~lv~ 78 (254)
T 1zmt_A 6 VTNVKHFGGMGSAL--RLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEA-----VTSAYGQVDVLVS 78 (254)
T ss_dssp ESSTTSTTHHHHHH--HHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHH-----HHHHHSCCCEEEE
T ss_pred EeCCCchHHHHHHH--HHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHH-----HHHHhCCCCEEEE
Confidence 79999999999966 44445667777777643221 33333332222 2211 26999999
Q ss_pred cCccc-Ccc----cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHH
Q psy16545 73 FAAVK-AVG----ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYG 143 (600)
Q Consensus 73 ~A~~~-~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~ 143 (600)
|||.. ... ...+++...+++|+.++.++++++. +.+.+++|++||...+.. . .+.+.|+
T Consensus 79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~~~~~Y~ 146 (254)
T 1zmt_A 79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP-----------W-KELSTYT 146 (254)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC-----------C-TTCHHHH
T ss_pred CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccC-----------C-CCchHHH
Confidence 99976 321 1224566799999999999998874 445679999999865532 2 4567999
Q ss_pred HHHHHHHHHHHHHHhhc--CCceEEEEecccccCCCC
Q psy16545 144 KTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAHP 178 (600)
Q Consensus 144 ~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~ 178 (600)
.||.+.+.+++.++.++ .++++++++||.|+||..
T Consensus 147 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~ 183 (254)
T 1zmt_A 147 SARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDS 183 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTC
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccc
Confidence 99999999999998775 289999999999999853
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.7e-11 Score=119.34 Aligned_cols=151 Identities=11% Similarity=-0.005 Sum_probs=113.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||+++-+|+.+++. +...+..++..||+ .+|++|++++++++++ +.+++
T Consensus 11 lVTGas~GIG~aiA~~--la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~-----~~~~~G 83 (254)
T 4fn4_A 11 IVTGAGSGIGRAIAKK--FALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRR-----TFETYS 83 (254)
T ss_dssp EEETTTSHHHHHHHHH--HHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH-----HHHHHS
T ss_pred EEeCCCCHHHHHHHHH--HHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-----HHHHcC
Confidence 4789999999988542 22223333333332 6899999999987766 55543
Q ss_pred CCCEEEEcCcccCcc-----cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|++|||||..... .+.+++...+++|+.|+.++.+++. +++-.++|++||....- +.
T Consensus 84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~-----------~~- 151 (254)
T 4fn4_A 84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIR-----------GG- 151 (254)
T ss_dssp CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------SS-
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcC-----------CC-
Confidence 599999999975321 2335677899999999999988863 44557999999975432 11
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+...+|+.||.+...+++.++.++ .|++++.+.||.|-.|.
T Consensus 152 ~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~ 194 (254)
T 4fn4_A 152 FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNI 194 (254)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSC
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcc
Confidence 455789999999999999999886 38999999999998875
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1.7e-11 Score=118.84 Aligned_cols=150 Identities=13% Similarity=0.034 Sum_probs=112.7
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc-----------------cccccChHHhhhHHhhhhcccccccC-CCCEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------EGDIVSMYANTDLAQKELGWSARCTH-DIDCV 70 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~V 70 (600)
|||+++.+|+.+++ .+...+.+++..|++ .+|++|+++++++.++ +.+.. ++|++
T Consensus 7 VTGas~GIG~aia~--~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~-----~~~~~g~iDiL 79 (247)
T 3ged_A 7 VTGGGHGIGKQICL--DFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEY-----AMEKLQRIDVL 79 (247)
T ss_dssp EESTTSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHH-----HHHHHSCCCEE
T ss_pred EecCCCHHHHHHHH--HHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHH-----HHHHcCCCCEE
Confidence 79999999999855 223333344444443 6899999999887766 55443 69999
Q ss_pred EEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHH
Q psy16545 71 IHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYG 143 (600)
Q Consensus 71 ih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~ 143 (600)
|||||...... ..+++...+++|+.|+..+.+++.+. +-.++|++||...+.. . +....|+
T Consensus 80 VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~-----------~-~~~~~Y~ 147 (247)
T 3ged_A 80 VNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQS-----------E-PDSEAYA 147 (247)
T ss_dssp EECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSC-----------C-TTCHHHH
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccC-----------C-CCCHHHH
Confidence 99999864322 23567789999999999999887432 2269999999765421 1 3457899
Q ss_pred HHHHHHHHHHHHHHhhc-CCceEEEEecccccCCC
Q psy16545 144 KTKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 144 ~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~ 177 (600)
.||.+...+++.++.++ ++++++.+.||.|-.+.
T Consensus 148 asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~ 182 (247)
T 3ged_A 148 SAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTE 182 (247)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCC
Confidence 99999999999999887 58999999999987664
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.28 E-value=6.9e-12 Score=124.02 Aligned_cols=151 Identities=16% Similarity=0.055 Sum_probs=111.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||+++.+|+.+++.. ...+.+++..+|+ .+|++|.+++.+++++ +.+.
T Consensus 24 lVTGas~gIG~aia~~l--~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~ 96 (266)
T 4egf_A 24 LITGATKGIGADIARAF--AAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARR-----AAEAF 96 (266)
T ss_dssp EETTTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHH-----HHHHH
T ss_pred EEeCCCcHHHHHHHHHH--HHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-----HHHHc
Confidence 58999999999985532 2222223322222 6899999988886554 3332
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc----C-CCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G-VYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
.++|++|||||...... ..+++...+++|+.++.++++++.+. + ..++|++||...+. +.
T Consensus 97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 165 (266)
T 4egf_A 97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA-----------PL 165 (266)
T ss_dssp TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CC
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc-----------CC
Confidence 26999999999875322 23456678999999999999987542 3 35899999987653 22
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.++ .+++++.++||.|.++.
T Consensus 166 -~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 208 (266)
T 4egf_A 166 -PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEM 208 (266)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHH
T ss_pred -CCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCch
Confidence 456899999999999999998875 38999999999999873
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.7e-11 Score=123.88 Aligned_cols=162 Identities=14% Similarity=0.050 Sum_probs=111.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccCh-HHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSM-YANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~-~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|.+|.++++... ..+.+++..+|+ .+|+++. +++..++++ +.+.
T Consensus 16 lITGas~GIG~~~a~~L~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~-----~~~~ 88 (311)
T 3o26_A 16 VVTGGNKGIGFEICKQLS--SNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADF-----IKTH 88 (311)
T ss_dssp EESSCSSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHH-----HHHH
T ss_pred EEecCCchHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHH-----HHHh
Confidence 489999999999855322 222233333322 6899998 877775554 3222
Q ss_pred -CCCCEEEEcCcccCcc----------------------------------cCCCChhhhHHhHHHHHHHHHHHHHH---
Q psy16545 65 -HDIDCVIHFAAVKAVG----------------------------------ESMQEPLMYYKNNLIATINLLEVMKS--- 106 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~----------------------------------~~~~~~~~~~~~Nv~gt~~ll~a~~~--- 106 (600)
.++|+||||||..... ...++++..+++|+.|+.++++++..
T Consensus 89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~ 168 (311)
T 3o26_A 89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ 168 (311)
T ss_dssp HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence 2699999999986421 12234556799999999999998753
Q ss_pred -cCCCeEEEecCccccCCCCC--------------------------------CCCCCCCCCCCCCChHHHHHHHHHHHH
Q psy16545 107 -HGVYQLVFSSSCTVYGEPQF--------------------------------LPITEDHPTGNIKNVYGKTKHFIEEML 153 (600)
Q Consensus 107 -~~~~r~I~~SS~~vyg~~~~--------------------------------~~~~E~~~~~~p~s~Y~~sK~~~e~~~ 153 (600)
.+..++|++||...+..... ....+...+ .+.+.|+.||++.+.++
T Consensus 169 ~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~SK~a~~~~~ 247 (311)
T 3o26_A 169 LSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWP-SFGAAYTTSKACLNAYT 247 (311)
T ss_dssp TSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCC-SSCHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCc-ccchhhHHHHHHHHHHH
Confidence 34579999999765421100 011111222 34578999999999999
Q ss_pred HHHHhhcCCceEEEEecccccCCC
Q psy16545 154 KDLSKAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 154 ~~~~~~~~~~~~~ilR~~~v~G~~ 177 (600)
+.++.++.+++++.++||.|..+.
T Consensus 248 ~~la~e~~~i~v~~v~PG~v~T~~ 271 (311)
T 3o26_A 248 RVLANKIPKFQVNCVCPGLVKTEM 271 (311)
T ss_dssp HHHHHHCTTSEEEEECCCSBCSGG
T ss_pred HHHHhhcCCceEEEecCCceecCC
Confidence 999999878999999999998875
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.1e-11 Score=122.54 Aligned_cols=147 Identities=14% Similarity=0.176 Sum_probs=108.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|.+|+.+++. +...+.+++..+|+ .+|+++.+++.++.++ +
T Consensus 14 lVTGas~gIG~aia~~--l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~------~-- 83 (267)
T 3t4x_A 14 LVTGSTAGIGKAIATS--LVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK------Y-- 83 (267)
T ss_dssp EETTCSSHHHHHHHHH--HHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH------C--
T ss_pred EEeCCCcHHHHHHHHH--HHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh------c--
Confidence 5899999999999653 22233333333332 5799998888873332 1
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|++|||||...... ..+++...+++|+.++.++++++. +.+.+++|++||...+. +.
T Consensus 84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~- 151 (267)
T 3t4x_A 84 PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIM-----------PS- 151 (267)
T ss_dssp CCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTS-----------CC-
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhcc-----------CC-
Confidence 26999999999864322 224456689999999888877763 45567999999987653 22
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+.+.|+.||.+.+.+++.++.++ .+++++.++||.+.++
T Consensus 152 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (267)
T 3t4x_A 152 QEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTE 193 (267)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCc
Confidence 467899999999999999999876 2799999999999876
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.27 E-value=9.7e-12 Score=123.20 Aligned_cols=151 Identities=11% Similarity=-0.043 Sum_probs=109.2
Q ss_pred cCCCCc--chHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQG--TSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~--g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++ +.+|+.+++... ..+.+++.++|+ .+|++|.+++.+++++ +.+.
T Consensus 18 lITGa~~~~giG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~ 90 (271)
T 3ek2_A 18 LLTGLLSNRSIAYGIAKACK--REGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFAS-----LKTHW 90 (271)
T ss_dssp EECCCCSTTSHHHHHHHHHH--HTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHH-----HHHHC
T ss_pred EEeCCCCCCcHHHHHHHHHH--HcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHH-----HHHHc
Confidence 489988 889999865322 222333333222 7899999998886655 3332
Q ss_pred CCCCEEEEcCcccCcc---------cCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVG---------ESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~---------~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
.++|+||||||..... ...+++...+++|+.++.++++++... ...++|++||...+..
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------- 160 (271)
T 3ek2_A 91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA---------- 160 (271)
T ss_dssp SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB----------
T ss_pred CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC----------
Confidence 2699999999986431 233456679999999999999999764 1248999999765532
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.++ .++++++++||.|..+.
T Consensus 161 -~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 204 (271)
T 3ek2_A 161 -I-PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLA 204 (271)
T ss_dssp -C-TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC----
T ss_pred -C-CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchh
Confidence 2 466899999999999999998775 38999999999999875
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1.1e-11 Score=122.81 Aligned_cols=151 Identities=13% Similarity=-0.047 Sum_probs=112.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+.+++.. ...+.+++.++|+ .+|+++.+++.+++++ +.+.
T Consensus 33 lITGas~gIG~~la~~l--~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~~ 105 (271)
T 4iin_A 33 LITGASKGIGAEIAKTL--ASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQT-----IVQSD 105 (271)
T ss_dssp EETTCSSHHHHHHHHHH--HHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEECCCcHHHHHHHHHH--HHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH-----HHHhc
Confidence 48999999999995532 2233334333331 6899999988885554 3322
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+||||||...... ..+++...+++|+.++.++++++.+ .+..++|++||...+.. .
T Consensus 106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~- 173 (271)
T 4iin_A 106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERG-----------N- 173 (271)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------C-
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCC-----------C-
Confidence 26999999999875422 2345667999999999999888743 45679999999765431 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.+. .+++++.++||.+..+.
T Consensus 174 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 216 (271)
T 4iin_A 174 MGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDM 216 (271)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCc
Confidence 466899999999999999998874 48999999999998874
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.4e-11 Score=118.52 Aligned_cols=147 Identities=12% Similarity=0.033 Sum_probs=111.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIH 72 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih 72 (600)
-|||+++-+|+.+++ .+...+.+++..||+ .+|++|+++++++.++ + .++|++||
T Consensus 15 lVTGas~GIG~aia~--~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~------~--g~iDiLVN 84 (242)
T 4b79_A 15 LVTGGSSGIGAAIAM--QFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEA------L--PRLDVLVN 84 (242)
T ss_dssp EEETTTSHHHHHHHH--HHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHH------C--SCCSEEEE
T ss_pred EEeCCCCHHHHHHHH--HHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHh------c--CCCCEEEE
Confidence 589999999999965 333344444444544 5899999999884443 2 26999999
Q ss_pred cCcccCcc--cCCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHH
Q psy16545 73 FAAVKAVG--ESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTK 146 (600)
Q Consensus 73 ~A~~~~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK 146 (600)
|||...+. ...++++..+++|+.|+..+.+++.. .+ .++|++||....- +. +....|+.||
T Consensus 85 NAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~-----------~~-~~~~~Y~asK 151 (242)
T 4b79_A 85 NAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTF-----------GS-ADRPAYSASK 151 (242)
T ss_dssp CCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTS-----------CC-SSCHHHHHHH
T ss_pred CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccC-----------CC-CCCHHHHHHH
Confidence 99986432 23356778999999999999988643 23 6899999975432 11 4567899999
Q ss_pred HHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 147 HFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 147 ~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+...+++.++.++ .|++++.+.||.|-.|.
T Consensus 152 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m 184 (242)
T 4b79_A 152 GAIVQLTRSLACEYAAERIRVNAIAPGWIDTPL 184 (242)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChh
Confidence 99999999999886 38999999999998874
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=3.1e-11 Score=118.79 Aligned_cols=152 Identities=16% Similarity=0.053 Sum_probs=111.7
Q ss_pred cCCCCcchHHHHHHHhhhcc-CCCccEEecccc-----------------------cccccChHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVT-GKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~-~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
-|||++|.+|+.+++..... ..+.+++.++|+ .+|+++++++.+++++ +.+
T Consensus 10 lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~ 84 (259)
T 1oaa_A 10 VLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA-----VRE 84 (259)
T ss_dssp EESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH-----HHH
T ss_pred EEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH-----HHh
Confidence 48999999999996633210 034444444443 4799999998886655 332
Q ss_pred --c-CCCC--EEEEcCcccCcc-------cCCCChhhhHHhHHHHHHHHHHHHHHc------CCCeEEEecCccccCCCC
Q psy16545 64 --T-HDID--CVIHFAAVKAVG-------ESMQEPLMYYKNNLIATINLLEVMKSH------GVYQLVFSSSCTVYGEPQ 125 (600)
Q Consensus 64 --~-~~~d--~Vih~A~~~~~~-------~~~~~~~~~~~~Nv~gt~~ll~a~~~~------~~~r~I~~SS~~vyg~~~ 125 (600)
. .++| +||||||..... ...+++...+++|+.|+.++++++... +..++|++||...+.
T Consensus 85 ~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~--- 161 (259)
T 1oaa_A 85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ--- 161 (259)
T ss_dssp SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS---
T ss_pred ccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC---
Confidence 1 1477 999999975321 223456779999999999999998754 235799999987653
Q ss_pred CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCC
Q psy16545 126 FLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGA 176 (600)
Q Consensus 126 ~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~ 176 (600)
+. .+.+.|+.||.+.+.+++.++.++.+++++.++||.+-.+
T Consensus 162 --------~~-~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~ 203 (259)
T 1oaa_A 162 --------PY-KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND 203 (259)
T ss_dssp --------CC-TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred --------CC-CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcc
Confidence 22 4568999999999999999999876699999999888655
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.26 E-value=6.3e-12 Score=123.91 Aligned_cols=151 Identities=15% Similarity=0.097 Sum_probs=106.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||+++.+|+++++. +...+.+++.++|+ .+|+++.+++.+++++ +.+. .++|
T Consensus 13 lITGas~gIG~~~a~~--l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~g~id 85 (261)
T 3n74_A 13 LITGAGSGFGEGMAKR--FAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEA-----ALSKFGKVD 85 (261)
T ss_dssp EEETTTSHHHHHHHHH--HHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHH-----HHHHHSCCC
T ss_pred EEECCCchHHHHHHHH--HHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHH-----HHHhcCCCC
Confidence 4899999999999653 22233344444443 5899999998885554 3322 2699
Q ss_pred EEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHHc----C----CCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSH----G----VYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 69 ~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~----~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
+||||||...... ..+++...+++|+.++.++++++... + ..++|++||...+. +.
T Consensus 86 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~ 154 (261)
T 3n74_A 86 ILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR-----------PR 154 (261)
T ss_dssp EEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS-----------CC
T ss_pred EEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC-----------CC
Confidence 9999999864221 23456678999999999999887432 1 34799999976543 22
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...+.|+.||.+.+.+++.++.++ .+++++.++||.+.++.
T Consensus 155 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 197 (261)
T 3n74_A 155 -PNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPL 197 (261)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------
T ss_pred -CCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChh
Confidence 456789999999999999998875 38999999999999885
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=3.4e-11 Score=113.73 Aligned_cols=111 Identities=20% Similarity=0.237 Sum_probs=88.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
..+++++.+|+.+++.+.++++ ++|+|||+|+.... . ++ .+.|+.++.+++++|++.+++|||++||..+|
T Consensus 45 ~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~~-~---~~---~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~ 115 (206)
T 1hdo_A 45 PRPAHVVVGDVLQAADVDKTVA--GQDAVIVLLGTRND-L---SP---TTVMSEGARNIVAAMKAHGVDKVVACTSAFLL 115 (206)
T ss_dssp CCCSEEEESCTTSHHHHHHHHT--TCSEEEECCCCTTC-C---SC---CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred CCceEEEEecCCCHHHHHHHHc--CCCEEEECccCCCC-C---Cc---cchHHHHHHHHHHHHHHhCCCeEEEEeeeeec
Confidence 3468899999999999999998 78999999987543 1 11 24889999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccC
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLG 385 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g 385 (600)
+.....+ . + .+.|+.+| ...|.+++ ..+++++++||+.++
T Consensus 116 ~~~~~~~------~-~-~~~y~~~K---~~~e~~~~----~~~i~~~~lrp~~~~ 155 (206)
T 1hdo_A 116 WDPTKVP------P-R-LQAVTDDH---IRMHKVLR----ESGLKYVAVMPPHIG 155 (206)
T ss_dssp SCTTCSC------G-G-GHHHHHHH---HHHHHHHH----HTCSEEEEECCSEEE
T ss_pred cCccccc------c-c-chhHHHHH---HHHHHHHH----hCCCCEEEEeCCccc
Confidence 8543221 1 2 37899999 66777764 478999999987763
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=3.4e-11 Score=118.57 Aligned_cols=150 Identities=13% Similarity=-0.042 Sum_probs=108.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhccccccc--
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCT-- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-- 64 (600)
-|||++|.+|+.+++... ..+.+++.++|+ .+|++|.+++.+++++ +.+.
T Consensus 9 lVTGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~~ 81 (260)
T 2qq5_A 9 VVTGASRGIGRGIALQLC--KAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQ-----VDREQQ 81 (260)
T ss_dssp EESSTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHH-----HHHHHT
T ss_pred EEeCCCchHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHH-----HHHhcC
Confidence 489999999999955322 222333333322 5799999998886654 4321
Q ss_pred CCCCEEEEcCc--cc-------Cc--ccCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCC
Q psy16545 65 HDIDCVIHFAA--VK-------AV--GESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPI 129 (600)
Q Consensus 65 ~~~d~Vih~A~--~~-------~~--~~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~ 129 (600)
.++|+|||||| .. .. ....+++...+++|+.++.++.+++. +.+.+++|++||...+..
T Consensus 82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------ 155 (260)
T 2qq5_A 82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY------ 155 (260)
T ss_dssp TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC------
T ss_pred CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC------
Confidence 36999999994 32 11 12234566789999999988887764 445679999999866532
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 130 TEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 130 ~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+.|+.||.+.+.+++.++.+. .++++++++||.+..+.
T Consensus 156 -------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 156 -------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp -------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred -------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 345789999999999999998764 38999999999998874
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.4e-11 Score=120.26 Aligned_cols=150 Identities=15% Similarity=0.114 Sum_probs=109.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccc--cChHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDI--VSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl--~~~~~~~~~~~~~~~~~~~~ 63 (600)
-|||++|.+|+.+++. +...+.+++.++|+ .+|+ ++.+++.+++++ +.+
T Consensus 18 lITGas~gIG~~ia~~--l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~-----~~~ 90 (247)
T 3i1j_A 18 LVTGAARGIGAAAARA--YAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR-----VEH 90 (247)
T ss_dssp EESSTTSHHHHHHHHH--HHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH-----HHH
T ss_pred EEeCCCChHHHHHHHH--HHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH-----HHH
Confidence 5899999999999653 33334444444443 3455 788877775543 322
Q ss_pred c-CCCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCC
Q psy16545 64 T-HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 64 ~-~~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
. .++|+||||||...... ..+++...+++|+.++.++++++. +.+.+++|++||...+.
T Consensus 91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------- 159 (247)
T 3i1j_A 91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRK----------- 159 (247)
T ss_dssp HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTS-----------
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcC-----------
Confidence 2 26999999999853322 234567799999999999999984 44557999999976543
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc---CCceEEEEecccccCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH---KEWNIISLRYFNPVGA 176 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~ 176 (600)
+. .+.+.|+.||.+.+.+++.++.++ .+++++.++||.+..+
T Consensus 160 ~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~ 204 (247)
T 3i1j_A 160 GR-ANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG 204 (247)
T ss_dssp CC-TTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH
T ss_pred CC-CCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc
Confidence 22 456899999999999999999875 4799999999988765
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.4e-11 Score=121.74 Aligned_cols=148 Identities=10% Similarity=-0.047 Sum_probs=110.4
Q ss_pred cCCCCcch--HHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhccc
Q psy16545 8 LGTGQGTS--VLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWS 60 (600)
Q Consensus 8 ~vtG~~g~--~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 60 (600)
-|||++|+ +|+.+++.....+ .++.++ .+|++|.+++.+++++
T Consensus 11 lVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~D~~~~~~v~~~~~~----- 80 (266)
T 3oig_A 11 VVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIIL-----PCDVTNDAEIETCFAS----- 80 (266)
T ss_dssp EEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEE-----ECCCSSSHHHHHHHHH-----
T ss_pred EEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEE-----eCCCCCHHHHHHHHHH-----
Confidence 48999987 9988854322111 134455 6899999998886554
Q ss_pred cccc-CCCCEEEEcCcccCc--------ccCCCChhhhHHhHHHHHHHHHHHHHHcC--CCeEEEecCccccCCCCCCCC
Q psy16545 61 ARCT-HDIDCVIHFAAVKAV--------GESMQEPLMYYKNNLIATINLLEVMKSHG--VYQLVFSSSCTVYGEPQFLPI 129 (600)
Q Consensus 61 ~~~~-~~~d~Vih~A~~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~r~I~~SS~~vyg~~~~~~~ 129 (600)
+.+. .++|+||||||.... ....+++...+++|+.++.++++++...- -.++|++||...+.
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~------- 153 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL------- 153 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS-------
T ss_pred HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc-------
Confidence 3332 269999999998642 11234456789999999999999997752 25899999976553
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 130 TEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 130 ~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+. +..+.|+.||.+.+.+++.++.++ .++++++++||.|..+.
T Consensus 154 ----~~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (266)
T 3oig_A 154 ----VM-PNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLS 198 (266)
T ss_dssp ----CC-TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGG
T ss_pred ----cC-CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccc
Confidence 22 456889999999999999998875 27999999999999875
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.7e-11 Score=121.33 Aligned_cols=148 Identities=12% Similarity=-0.021 Sum_probs=111.4
Q ss_pred cCCCCcchHHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
-|||++|.+|+.+++.....+ .++.++ .+|++|.+++.+++++ +.
T Consensus 30 lVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~-----~~Dl~~~~~~~~~~~~-----~~ 99 (267)
T 4iiu_A 30 LVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLL-----SFDVANREQCREVLEH-----EI 99 (267)
T ss_dssp EETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-----ECCTTCHHHHHHHHHH-----HH
T ss_pred EEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEE-----EecCCCHHHHHHHHHH-----HH
Confidence 589999999999965322111 133444 6899999998885554 33
Q ss_pred cc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH-----HcCCCeEEEecCccccCCCCCCCCCCC
Q psy16545 63 CT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK-----SHGVYQLVFSSSCTVYGEPQFLPITED 132 (600)
Q Consensus 63 ~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~-----~~~~~r~I~~SS~~vyg~~~~~~~~E~ 132 (600)
+. .++|+||||||...... ..+++...+++|+.++.++++++. +.+..++|++||...+..
T Consensus 100 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--------- 170 (267)
T 4iiu_A 100 AQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMG--------- 170 (267)
T ss_dssp HHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHC---------
T ss_pred HHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccC---------
Confidence 22 26999999999875322 334567799999999999999873 445679999999765431
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.++ .++++++++||.|.++.
T Consensus 171 --~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 214 (267)
T 4iiu_A 171 --N-RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGM 214 (267)
T ss_dssp --C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred --C-CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCc
Confidence 2 456899999999999999888775 28999999999999885
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.7e-11 Score=118.89 Aligned_cols=133 Identities=18% Similarity=0.159 Sum_probs=88.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCC-ccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKP-VPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVI 71 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~-~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vi 71 (600)
.|||++|++|+.+.+ .+...+ .++++++|+ .+|++|++++.+ +++ ++|+||
T Consensus 27 lVtGatG~iG~~l~~--~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~--~~D~vv 93 (236)
T 3qvo_A 27 LILGAGGQIARHVIN--QLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQ---------AMQ--GQDIVY 93 (236)
T ss_dssp EEETTTSHHHHHHHH--HHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHH---------HHT--TCSEEE
T ss_pred EEEeCCcHHHHHHHH--HHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHH---------Hhc--CCCEEE
Confidence 589999999999965 334444 455555544 579999999888 776 789999
Q ss_pred EcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCC--CCCCCCCCCCCCChHHHHHHHH
Q psy16545 72 HFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFL--PITEDHPTGNIKNVYGKTKHFI 149 (600)
Q Consensus 72 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~--~~~E~~~~~~p~s~Y~~sK~~~ 149 (600)
|+|+.... ...+.+++++|++.++++||++||.++|+..... +..|..+. .+...|+.+
T Consensus 94 ~~a~~~~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---- 154 (236)
T 3qvo_A 94 ANLTGEDL--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIG-EPLKPFRRA---- 154 (236)
T ss_dssp EECCSTTH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------C-GGGHHHHHH----
T ss_pred EcCCCCch--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhccc-chHHHHHHH----
Confidence 99975321 1346789999999999999999999999754322 23343333 344455544
Q ss_pred HHHHHHHHhhcCCceEEEEecccccCCC
Q psy16545 150 EEMLKDLSKAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 150 e~~~~~~~~~~~~~~~~ilR~~~v~G~~ 177 (600)
|..++ .. +++++++|||.++++.
T Consensus 155 ~~~l~----~~-gi~~~~vrPg~i~~~~ 177 (236)
T 3qvo_A 155 ADAIE----AS-GLEYTILRPAWLTDED 177 (236)
T ss_dssp HHHHH----TS-CSEEEEEEECEEECCS
T ss_pred HHHHH----HC-CCCEEEEeCCcccCCC
Confidence 44332 33 8999999999999874
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.26 E-value=7.3e-12 Score=123.19 Aligned_cols=151 Identities=12% Similarity=0.039 Sum_probs=110.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIH 72 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih 72 (600)
-|||+++.+|+.+++... ..+.+++.++++ .+|++|.+++.++++. +.+..++|++||
T Consensus 13 lVTGas~gIG~aia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~g~id~lv~ 85 (257)
T 3tl3_A 13 VVTGGASGLGLATTKRLL--DAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDL-----AETMGTLRIVVN 85 (257)
T ss_dssp EEETTTSHHHHHHHHHHH--HHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHH-----HHHHSCEEEEEE
T ss_pred EEeCCCCHHHHHHHHHHH--HCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHH-----HHHhCCCCEEEE
Confidence 489999999999965322 222233333322 6899999998885554 222237999999
Q ss_pred cCcccCcc--------cCCCChhhhHHhHHHHHHHHHHHHHHc------------CCCeEEEecCccccCCCCCCCCCCC
Q psy16545 73 FAAVKAVG--------ESMQEPLMYYKNNLIATINLLEVMKSH------------GVYQLVFSSSCTVYGEPQFLPITED 132 (600)
Q Consensus 73 ~A~~~~~~--------~~~~~~~~~~~~Nv~gt~~ll~a~~~~------------~~~r~I~~SS~~vyg~~~~~~~~E~ 132 (600)
|||..... ...+++...+++|+.++.++++++... +..++|++||...+..
T Consensus 86 nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------- 156 (257)
T 3tl3_A 86 CAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG--------- 156 (257)
T ss_dssp CGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC---------
T ss_pred CCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC---------
Confidence 99975321 234557789999999999999998653 2348999999865431
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.++ .+++++.++||.|..+.
T Consensus 157 --~-~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~ 200 (257)
T 3tl3_A 157 --Q-IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPL 200 (257)
T ss_dssp --H-HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred --C-CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChh
Confidence 1 345789999999999999998875 38999999999998885
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.25 E-value=4.5e-11 Score=131.45 Aligned_cols=144 Identities=13% Similarity=0.104 Sum_probs=101.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccccc---------------------------ccccChHHhhhHHhhhhccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE---------------------------GDIVSMYANTDLAQKELGWS 60 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~---------------------------~Dl~~~~~~~~~~~~~~~~~ 60 (600)
-|||+++-+|+.++. .+...+.+++..|+.. +|+.|.+++.+++++
T Consensus 12 lVTGas~GIG~a~A~--~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~----- 84 (604)
T 2et6_A 12 IITGAGGGLGKYYSL--EFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVET----- 84 (604)
T ss_dssp EETTTTSHHHHHHHH--HHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHH-----
T ss_pred EEeCCCcHHHHHHHH--HHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHH-----
Confidence 489999999999966 3344455666554421 344554444443333
Q ss_pred ccccC-CCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccc-cCCCCCCCCC
Q psy16545 61 ARCTH-DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTV-YGEPQFLPIT 130 (600)
Q Consensus 61 ~~~~~-~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~v-yg~~~~~~~~ 130 (600)
+.+.. ++|++|||||..... ...+++...+++|+.|+.++.+++. +.+-.++|++||... ++.
T Consensus 85 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~------- 157 (604)
T 2et6_A 85 AVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGN------- 157 (604)
T ss_dssp HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-------
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC-------
Confidence 33322 599999999986432 1234567799999999999998863 344569999999643 332
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecc
Q psy16545 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYF 171 (600)
Q Consensus 131 E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~ 171 (600)
.....|+.||.+...+++.++.+. .|++++.+.|+
T Consensus 158 ------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 158 ------FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 345789999999999999999875 38999999996
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.25 E-value=3.8e-11 Score=122.31 Aligned_cols=146 Identities=13% Similarity=0.107 Sum_probs=108.8
Q ss_pred CCCCcchHHHHHHHhhhccC------------------------------CCccEEecccccccccChHHhhhHHhhhhc
Q psy16545 9 GTGQGTSVLQLLRTFERVTG------------------------------KPVPYIVEARREGDIVSMYANTDLAQKELG 58 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~------------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 58 (600)
|||++|.+|+.+++.....+ .++.++ .+|++|.+++.+++++
T Consensus 7 VTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dv~d~~~v~~~~~~--- 78 (327)
T 1jtv_A 7 ITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL-----QLDVRDSKSVAAARER--- 78 (327)
T ss_dssp ESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEE-----ECCTTCHHHHHHHHHT---
T ss_pred EECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEE-----EecCCCHHHHHHHHHH---
Confidence 89999999999855322111 234455 7899999999886554
Q ss_pred ccccccCCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCC
Q psy16545 59 WSARCTHDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPIT 130 (600)
Q Consensus 59 ~~~~~~~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~ 130 (600)
+ ...++|+||||||...... ..+++...+++|+.|+.++++++ ++.+.++||++||...+..
T Consensus 79 --~-~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~------- 148 (327)
T 1jtv_A 79 --V-TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG------- 148 (327)
T ss_dssp --C-TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC-------
T ss_pred --H-hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccC-------
Confidence 3 2246999999999753321 23456679999999999999986 4456679999999865431
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 131 E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. ...+.|+.||.+.+.+++.++.+. .++++++++||.|..+.
T Consensus 149 ----~-~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 149 ----L-PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp ----C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred ----C-CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence 1 345789999999999999998764 38999999999998774
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.25 E-value=2.1e-11 Score=120.63 Aligned_cols=146 Identities=14% Similarity=-0.002 Sum_probs=104.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|++|++++.+++++ +.+.
T Consensus 11 lVTGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~ 83 (267)
T 2gdz_A 11 LVTGAAQGIGRAFAEALL--LKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRK-----VVDH 83 (267)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHH-----HHHH
T ss_pred EEECCCCcHHHHHHHHHH--HCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHH-----HHHH
Confidence 589999999999855322 222233322221 6799999988885544 3222
Q ss_pred -CCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHH----HHcC---CCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 -HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVM----KSHG---VYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 -~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~---~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.++|+||||||... ..++...+++|+.++..+.+++ ++.+ .+++|++||...+.. .
T Consensus 84 ~g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~- 147 (267)
T 2gdz_A 84 FGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP-----------V- 147 (267)
T ss_dssp HSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----------C-
T ss_pred cCCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCC-----------C-
Confidence 25899999999753 4567889999999877766554 3432 578999999876642 2
Q ss_pred CCCChHHHHHHHHHHHHHHHH--hhc--CCceEEEEecccccCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLS--KAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~--~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+.+.|+.||.+.+.+++.++ .+. .++++++++||.+.++
T Consensus 148 ~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~ 191 (267)
T 2gdz_A 148 AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTA 191 (267)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcch
Confidence 355789999999999998752 222 3899999999999887
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=2.1e-11 Score=123.78 Aligned_cols=146 Identities=16% Similarity=0.117 Sum_probs=108.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------------cccccChHHhhhHHhhhhccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------------EGDIVSMYANTDLAQKELGWS 60 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------~~Dl~~~~~~~~~~~~~~~~~ 60 (600)
-|||++|.+|+.+++. +...+.+++..|+. .+|+.+.+++.+++++
T Consensus 13 lVTGas~GIG~~~a~~--La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~----- 85 (319)
T 1gz6_A 13 LVTGAGGGLGRAYALA--FAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT----- 85 (319)
T ss_dssp EETTTTSHHHHHHHHH--HHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH-----
T ss_pred EEeCCCcHHHHHHHHH--HHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHH-----
Confidence 5899999999999663 33345566654431 3578887776664443
Q ss_pred ccccC-CCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCc-cccCCCCCCCCC
Q psy16545 61 ARCTH-DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSC-TVYGEPQFLPIT 130 (600)
Q Consensus 61 ~~~~~-~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~-~vyg~~~~~~~~ 130 (600)
+.+.. ++|+||||||..... ...++++..+++|+.|+.++++++ ++.+.++||++||. +.++.
T Consensus 86 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~------- 158 (319)
T 1gz6_A 86 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN------- 158 (319)
T ss_dssp HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-------
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC-------
Confidence 33322 699999999986432 123456779999999999999887 44566799999996 44553
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccc
Q psy16545 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNP 173 (600)
Q Consensus 131 E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v 173 (600)
.+...|+.||.+.+.+++.++.+. .++++++++||.+
T Consensus 159 ------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~ 197 (319)
T 1gz6_A 159 ------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 197 (319)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence 356799999999999999998775 3899999999987
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.24 E-value=7.6e-12 Score=123.42 Aligned_cols=150 Identities=12% Similarity=0.022 Sum_probs=108.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------------cccccChHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------------EGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------------~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
-|||+++.+|+.+++ .+...+.+++.+++. .+|++|.+++.+++++ +.+
T Consensus 15 lVTGas~GIG~aia~--~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-----~~~ 87 (262)
T 3ksu_A 15 VIAGGIKNLGALTAK--TFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF-----AEK 87 (262)
T ss_dssp EEETCSSHHHHHHHH--HHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH-----HHH
T ss_pred EEECCCchHHHHHHH--HHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-----HHH
Confidence 489999999999955 333334444433221 6899999999886654 333
Q ss_pred c-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 64 T-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 64 ~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
. .++|++|||||...... ..+++...+++|+.++.++++++... +..++|++||...+.. .
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~-----------~- 155 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAY-----------T- 155 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHH-----------H-
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccC-----------C-
Confidence 2 26999999999864322 23456678999999999999999874 3468999999866542 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
...+.|+.||.+.+.+++.++.++ .+++++.++||.|..+
T Consensus 156 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 197 (262)
T 3ksu_A 156 GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTS 197 (262)
T ss_dssp CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCc
Confidence 345789999999999999999886 3899999999998766
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.24 E-value=4.4e-11 Score=119.49 Aligned_cols=147 Identities=13% Similarity=0.011 Sum_probs=108.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------------cccccChHHhhhHHhhhhcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------------EGDIVSMYANTDLAQKELGW 59 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------------~~Dl~~~~~~~~~~~~~~~~ 59 (600)
-|||+++.+|+.+++ ++...+.+++.++|+ .+|++|.+++.+++++
T Consensus 13 lVTGas~GIG~aia~--~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~---- 86 (285)
T 3sc4_A 13 FISGGSRGIGLAIAK--RVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK---- 86 (285)
T ss_dssp EEESCSSHHHHHHHH--HHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH----
T ss_pred EEECCCCHHHHHHHH--HHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH----
Confidence 489999999999965 333334444444443 4699999998886654
Q ss_pred ccccc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc----CCCeEEEecCccccCCCCCCCCC
Q psy16545 60 SARCT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----GVYQLVFSSSCTVYGEPQFLPIT 130 (600)
Q Consensus 60 ~~~~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~r~I~~SS~~vyg~~~~~~~~ 130 (600)
+.+. .++|++|||||...... ..+++...+++|+.++.++++++... +..++|++||...+..
T Consensus 87 -~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------- 158 (285)
T 3sc4_A 87 -TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEP------- 158 (285)
T ss_dssp -HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSG-------
T ss_pred -HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccC-------
Confidence 3332 26999999999874322 22445678889999999999998654 4569999999754432
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEeccc
Q psy16545 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFN 172 (600)
Q Consensus 131 E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~ 172 (600)
.. .+.+.|+.||.+.+.+++.++.++ .+++++.++||.
T Consensus 159 ---~~-~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~ 198 (285)
T 3sc4_A 159 ---KW-LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRT 198 (285)
T ss_dssp ---GG-SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSS
T ss_pred ---CC-CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCC
Confidence 11 245789999999999999999875 389999999984
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.24 E-value=5.1e-11 Score=117.77 Aligned_cols=153 Identities=14% Similarity=0.013 Sum_probs=111.5
Q ss_pred cCCCCc--chHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQG--TSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~--g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
-|||++ +.+|..+++.. ...+..++.++++ .+|++|.+++.+++++ +.
T Consensus 24 lITGas~~~giG~~~a~~l--~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~-----~~ 96 (267)
T 3gdg_A 24 VVTGASGPKGMGIEAARGC--AEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKD-----VV 96 (267)
T ss_dssp EETTCCSSSSHHHHHHHHH--HHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHH-----HH
T ss_pred EEECCCCCCChHHHHHHHH--HHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHH-----HH
Confidence 489998 78999885532 2223333333322 5899999998886655 33
Q ss_pred ccC-CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCC
Q psy16545 63 CTH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 63 ~~~-~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
+.. ++|+||||||...... ..+++...+++|+.++.++++++ ++.+..++|++||...+...
T Consensus 97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 167 (267)
T 3gdg_A 97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN--------- 167 (267)
T ss_dssp HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC---------
Confidence 322 6999999999875322 23456679999999999999987 44556799999997654321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhcC-CceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAHK-EWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~~-~~~~~ilR~~~v~G~~ 177 (600)
.. .+.+.|+.||.+.+.+++.++.++. .++++.+.||.+..+.
T Consensus 168 ~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~ 211 (267)
T 3gdg_A 168 FP-QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGL 211 (267)
T ss_dssp SS-SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSC
T ss_pred CC-CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccch
Confidence 11 3568899999999999999998873 4899999999998764
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.24 E-value=2.3e-11 Score=124.07 Aligned_cols=151 Identities=12% Similarity=0.064 Sum_probs=110.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecc-cc----------------------cccccChH-----------------
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEA-RR----------------------EGDIVSMY----------------- 47 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~-~~----------------------~~Dl~~~~----------------- 47 (600)
-|||++|.+|+.+++.. ...+.+++.++ |+ .+|+++.+
T Consensus 50 lVTGas~GIG~aia~~L--a~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~ 127 (328)
T 2qhx_A 50 LVTGAAKRLGRSIAEGL--HAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT 127 (328)
T ss_dssp EETTCSSHHHHHHHHHH--HHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHHH
T ss_pred EEECCCCHHHHHHHHHH--HHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccccHH
Confidence 58999999999996533 22333344333 22 57999888
Q ss_pred HhhhHHhhhhccccccc-CCCCEEEEcCcccCccc----C--------------CCChhhhHHhHHHHHHHHHHHHHH--
Q psy16545 48 ANTDLAQKELGWSARCT-HDIDCVIHFAAVKAVGE----S--------------MQEPLMYYKNNLIATINLLEVMKS-- 106 (600)
Q Consensus 48 ~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~~~~~~----~--------------~~~~~~~~~~Nv~gt~~ll~a~~~-- 106 (600)
++.+++++ +.+. .++|+||||||...... . .+++...+++|+.++.++++++..
T Consensus 128 ~v~~~~~~-----~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 202 (328)
T 2qhx_A 128 RCAELVAA-----CYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV 202 (328)
T ss_dssp HHHHHHHH-----HHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-----HHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77775543 3222 26999999999864321 1 233456899999999999998753
Q ss_pred --cC------CCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 107 --HG------VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 107 --~~------~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+ .++||++||...+. +. .+...|+.||.+.+.+++.++.++ .++++++++||.|.++
T Consensus 203 ~~~~~~~~~~~g~IV~isS~~~~~-----------~~-~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 270 (328)
T 2qhx_A 203 AGTPAKHRGTNYSIINMVDAMTNQ-----------PL-LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV 270 (328)
T ss_dssp HHSCGGGSCSCEEEEEECCTTTTS-----------CC-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred HhcCCcCCCCCcEEEEECchhhcc-----------CC-CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCC
Confidence 34 57999999986543 22 456899999999999999998875 3899999999999988
Q ss_pred C
Q psy16545 177 H 177 (600)
Q Consensus 177 ~ 177 (600)
.
T Consensus 271 ~ 271 (328)
T 2qhx_A 271 D 271 (328)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.5e-11 Score=125.00 Aligned_cols=190 Identities=11% Similarity=0.130 Sum_probs=127.5
Q ss_pred hhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecCc
Q psy16545 249 FTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSC 327 (600)
Q Consensus 249 l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~r~v~~SS~ 327 (600)
+...+++++.+|+.|++++.++++ ++|+|||+|+... +.++.+++++|++.+ ++|||+ |
T Consensus 53 ~~~~~v~~v~~D~~d~~~l~~a~~--~~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S-- 112 (321)
T 3c1o_A 53 FRSMGVTIIEGEMEEHEKMVSVLK--QVDIVISALPFPM---------------ISSQIHIINAIKAAGNIKRFLP-S-- 112 (321)
T ss_dssp HHHTTCEEEECCTTCHHHHHHHHT--TCSEEEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC-S--
T ss_pred hhcCCcEEEEecCCCHHHHHHHHc--CCCEEEECCCccc---------------hhhHHHHHHHHHHhCCccEEec-c--
Confidence 334678999999999999999998 7999999998632 456789999999998 999983 3
Q ss_pred ccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCCCC
Q psy16545 328 TVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKP 407 (600)
Q Consensus 328 ~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~~ 407 (600)
+||... +|+.+..|..+.| .+| ...|.+++ ..+++++++||+.+++. .+..+ ...
T Consensus 113 -~~g~~~----~~~~~~~p~~~~y-~sK---~~~e~~~~----~~~~~~~~lrp~~~~~~-------~~~~~---~~~-- 167 (321)
T 3c1o_A 113 -DFGCEE----DRIKPLPPFESVL-EKK---RIIRRAIE----AAALPYTYVSANCFGAY-------FVNYL---LHP-- 167 (321)
T ss_dssp -CCSSCG----GGCCCCHHHHHHH-HHH---HHHHHHHH----HHTCCBEEEECCEEHHH-------HHHHH---HCC--
T ss_pred -ccccCc----cccccCCCcchHH-HHH---HHHHHHHH----HcCCCeEEEEeceeccc-------ccccc---ccc--
Confidence 466421 3333333323578 899 66777765 46899999998765220 11100 000
Q ss_pred cceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhh
Q psy16545 408 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLL 487 (600)
Q Consensus 408 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 487 (600)
+. .. ..+.++++ ++.++..
T Consensus 168 --------~~-------------------~~------------------------~~~~~~~~----~~~~~~~------ 186 (321)
T 3c1o_A 168 --------SP-------------------HP------------------------NRNDDIVI----YGTGETK------ 186 (321)
T ss_dssp --------CS-------------------SC------------------------CTTSCEEE----ETTSCCE------
T ss_pred --------cc-------------------cc------------------------cccCceEE----ecCCCcc------
Confidence 00 00 00112221 1223322
Q ss_pred hhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCC-ceeEeEcCC-CCCccHHHHHHHHhhhcCCcccccccC
Q psy16545 488 RTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV-PYIFYNLGT-GQGTSVLQLLRTFERVTGKPVPYIVEA 564 (600)
Q Consensus 488 ~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~-~~~~~nl~~-~~~~s~~e~~~~~~~~~g~~~~~~~~~ 564 (600)
++|++ ++|+++++..++..+. .+++|++.+ ++.+|+.|+++.+.+.+|.+.++...+
T Consensus 187 ~~~i~--------------------~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 245 (321)
T 3c1o_A 187 FVLNY--------------------EEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMP 245 (321)
T ss_dssp EEEEC--------------------HHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEEEC
T ss_pred eeEee--------------------HHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcceeeeCC
Confidence 67777 8899999988886543 367888875 589999999999999999876665554
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.24 E-value=6.9e-11 Score=117.78 Aligned_cols=121 Identities=19% Similarity=0.112 Sum_probs=93.2
Q ss_pred hhCCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHH----HHHHHHHHHH
Q psy16545 249 FTGKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIA----TINLLEVMKS 315 (600)
Q Consensus 249 l~~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~g----t~~ll~~~~~ 315 (600)
..+..++++.+|+++.+++.++++.. ++|++||+|+..... .+.++....+++|+.+ +..++..+++
T Consensus 48 ~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 127 (281)
T 3m1a_A 48 AYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRE 127 (281)
T ss_dssp HCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34567899999999999998887753 789999999975432 2334556788999999 5555555566
Q ss_pred cCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 316 HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 316 ~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.+.+++|++||.+.+.. .+..+.|+.|| ...|.+++.++.+ +++++..++|+.+
T Consensus 128 ~~~~~iv~~sS~~~~~~------------~~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 184 (281)
T 3m1a_A 128 RGSGSVVNISSFGGQLS------------FAGFSAYSATK---AALEQLSEGLADEVAPFGIKVLIVEPGAF 184 (281)
T ss_dssp HTCEEEEEECCGGGTCC------------CTTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred cCCCEEEEEcCccccCC------------CCCchHHHHHH---HHHHHHHHHHHHHhhccCcEEEEEecCcc
Confidence 67789999999876532 12247899999 7789999988877 7899999998764
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=4.8e-11 Score=121.11 Aligned_cols=187 Identities=13% Similarity=0.121 Sum_probs=125.8
Q ss_pred hhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecCc
Q psy16545 249 FTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSSC 327 (600)
Q Consensus 249 l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~r~v~~SS~ 327 (600)
+...+++++.+|+.|++++.++++ ++|+|||+++... +.++.+++++|++.+ ++|||+ |
T Consensus 55 l~~~~v~~v~~Dl~d~~~l~~a~~--~~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S-- 114 (318)
T 2r6j_A 55 FQSLGAIIVKGELDEHEKLVELMK--KVDVVISALAFPQ---------------ILDQFKILEAIKVAGNIKRFLP-S-- 114 (318)
T ss_dssp HHHTTCEEEECCTTCHHHHHHHHT--TCSEEEECCCGGG---------------STTHHHHHHHHHHHCCCCEEEC-S--
T ss_pred hhcCCCEEEEecCCCHHHHHHHHc--CCCEEEECCchhh---------------hHHHHHHHHHHHhcCCCCEEEe-e--
Confidence 334578999999999999999998 8999999998531 446789999999998 999985 3
Q ss_pred ccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCCCC
Q psy16545 328 TVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKP 407 (600)
Q Consensus 328 ~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~~ 407 (600)
+||.. .+|..+..|..+.| .+| ...|.+++ ..+++++++|+..+++. ++..+ ....
T Consensus 115 -~~g~~----~~~~~~~~p~~~~y-~sK---~~~e~~~~----~~~~~~~~lr~~~~~~~-------~~~~~---~~~~- 170 (318)
T 2r6j_A 115 -DFGVE----EDRINALPPFEALI-ERK---RMIRRAIE----EANIPYTYVSANCFASY-------FINYL---LRPY- 170 (318)
T ss_dssp -CCSSC----TTTCCCCHHHHHHH-HHH---HHHHHHHH----HTTCCBEEEECCEEHHH-------HHHHH---HCTT-
T ss_pred -ccccC----cccccCCCCcchhH-HHH---HHHHHHHH----hcCCCeEEEEcceehhh-------hhhhh---cccc-
Confidence 46632 13333333323568 888 66777665 46899999998655210 11100 0000
Q ss_pred cceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhh
Q psy16545 408 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLL 487 (600)
Q Consensus 408 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 487 (600)
. .+.++.+ ++.++. .
T Consensus 171 ------------------------------~-------------------------~~~~~~~----~~~~~~--~---- 185 (318)
T 2r6j_A 171 ------------------------------D-------------------------PKDEITV----YGTGEA--K---- 185 (318)
T ss_dssp ------------------------------C-------------------------CCSEEEE----ETTSCC--E----
T ss_pred ------------------------------C-------------------------CCCceEE----ecCCCc--e----
Confidence 0 0111111 122222 2
Q ss_pred hhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCC-ceeEeEcCC-CCCccHHHHHHHHhhhcCCcccccccC
Q psy16545 488 RTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV-PYIFYNLGT-GQGTSVLQLLRTFERVTGKPVPYIVEA 564 (600)
Q Consensus 488 ~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~-~~~~~nl~~-~~~~s~~e~~~~~~~~~g~~~~~~~~~ 564 (600)
++|++ ++|+++++..++..+. .++.|++.+ ++.+|..|+++.+++.+|.+.++...+
T Consensus 186 ~~~i~--------------------~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 244 (318)
T 2r6j_A 186 FAMNY--------------------EQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVP 244 (318)
T ss_dssp EEEEC--------------------HHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEEEC
T ss_pred eeEee--------------------HHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCCCceeecC
Confidence 67777 8899999998887653 367777764 589999999999999999876655544
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=2.3e-11 Score=121.34 Aligned_cols=151 Identities=15% Similarity=0.111 Sum_probs=109.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||+++.+|+.+++.. ...+.+++..+|+ .+|+++.+++.+++++ +.+. .++|
T Consensus 9 lVTGas~GIG~aia~~l--a~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g~iD 81 (281)
T 3zv4_A 9 LITGGASGLGRALVDRF--VAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAER-----CLAAFGKID 81 (281)
T ss_dssp EEETCSSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHH-----HHHHHSCCC
T ss_pred EEECCCcHHHHHHHHHH--HHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHH-----HHHhcCCCC
Confidence 48999999999996532 2233344444433 5799999998886654 3332 2699
Q ss_pred EEEEcCcccCcccCC---------CChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGESM---------QEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 69 ~Vih~A~~~~~~~~~---------~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|||||........ +++...+++|+.++.++++++... .-.++|++||...+. +.
T Consensus 82 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~- 149 (281)
T 3zv4_A 82 TLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFY-----------PN- 149 (281)
T ss_dssp EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS-----------SS-
T ss_pred EEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhcc-----------CC-
Confidence 999999986432111 125668899999999999997542 125899999986543 22
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc-CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~ 177 (600)
...+.|+.||.+.+.+++.++.++ ++++++.++||.|..+.
T Consensus 150 ~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~ 191 (281)
T 3zv4_A 150 GGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDL 191 (281)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCc
Confidence 456789999999999999999886 35999999999998874
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.4e-11 Score=125.37 Aligned_cols=150 Identities=12% Similarity=-0.004 Sum_probs=111.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------------------------cccccChHHhhhHHhhh
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------------------------EGDIVSMYANTDLAQKE 56 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------------------~~Dl~~~~~~~~~~~~~ 56 (600)
-|||+++.+|+.+++. +...+.+++.+|++ .+|++|.+++.+++++
T Consensus 31 lVTGas~GIG~aia~~--la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~- 107 (322)
T 3qlj_A 31 IVTGAGGGIGRAHALA--FAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQT- 107 (322)
T ss_dssp EETTTTSHHHHHHHHH--HHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHH-
T ss_pred EEECCCcHHHHHHHHH--HHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-
Confidence 5899999999999663 33334455544442 5799999998886554
Q ss_pred hccccccc-CCCCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHHcC----------CCeEEEecCcccc
Q psy16545 57 LGWSARCT-HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSHG----------VYQLVFSSSCTVY 121 (600)
Q Consensus 57 ~~~~~~~~-~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~~----------~~r~I~~SS~~vy 121 (600)
+.+. .++|+||||||..... ...+++...+++|+.|+.++++++...- -.+||++||...+
T Consensus 108 ----~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~ 183 (322)
T 3qlj_A 108 ----AVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL 183 (322)
T ss_dssp ----HHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH
T ss_pred ----HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHc
Confidence 3332 2699999999987532 2234567799999999999999875431 1489999997654
Q ss_pred CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 122 GEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 122 g~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.. . .+.+.|+.||.+.+.+++.++.++ .+++++.++|| +..+.
T Consensus 184 ~~-----------~-~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~ 228 (322)
T 3qlj_A 184 QG-----------S-VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRM 228 (322)
T ss_dssp HC-----------B-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCC
T ss_pred cC-----------C-CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCcc
Confidence 31 1 456799999999999999998875 38999999999 76653
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=2.4e-12 Score=131.31 Aligned_cols=158 Identities=12% Similarity=-0.038 Sum_probs=105.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCc-------cEEeccccc---------ccccChH--HhhhHHhhhhcccccccCCCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPV-------PYIVEARRE---------GDIVSMY--ANTDLAQKELGWSARCTHDIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~-------~~~~~~~~~---------~Dl~~~~--~~~~~~~~~~~~~~~~~~~~d~ 69 (600)
.|||++|++|+++.... ...+. +++.+|+.. .|+.+.. .+..+....+..+++. ++|+
T Consensus 8 lVtGaaGfIG~~l~~~L--~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~--~~D~ 83 (327)
T 1y7t_A 8 AVTGAAGQIGYSLLFRI--AAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFK--DADY 83 (327)
T ss_dssp EESSTTSHHHHHHHHHH--HTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTT--TCSE
T ss_pred EEECCCCHHHHHHHHHH--HhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhC--CCCE
Confidence 58999999999996643 22332 677566542 1221100 0000000000111444 7999
Q ss_pred EEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcC-CC-eEEEecCccccCCCCCCCCC-CCC-CCCCCCChHHHH
Q psy16545 70 VIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VY-QLVFSSSCTVYGEPQFLPIT-EDH-PTGNIKNVYGKT 145 (600)
Q Consensus 70 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~-r~I~~SS~~vyg~~~~~~~~-E~~-~~~~p~s~Y~~s 145 (600)
|||+||..... ..++...++.|+.++.++++++++.+ .+ +++++|+..--. .++. |.. .. +|.++|+.+
T Consensus 84 Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~----~~~~~~~~~~~-~p~~~yg~t 156 (327)
T 1y7t_A 84 ALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTN----ALIAYKNAPGL-NPRNFTAMT 156 (327)
T ss_dssp EEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH----HHHHHHTCTTS-CGGGEEECC
T ss_pred EEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhh----HHHHHHHcCCC-Chhheeccc
Confidence 99999987532 35677899999999999999999985 54 778777643000 1111 222 34 567889999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEecccccCCC
Q psy16545 146 KHFIEEMLKDLSKAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 146 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~ 177 (600)
|+..|++...+++.. +++.+++|+++||||+
T Consensus 157 kl~~er~~~~~a~~~-g~~~~~vr~~~V~G~h 187 (327)
T 1y7t_A 157 RLDHNRAKAQLAKKT-GTGVDRIRRMTVWGNH 187 (327)
T ss_dssp HHHHHHHHHHHHHHH-TCCGGGEECCEEEBCS
T ss_pred hHHHHHHHHHHHHHh-CcChhheeeeEEEcCC
Confidence 999999999888876 9999999999999996
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.23 E-value=3.1e-11 Score=118.80 Aligned_cols=149 Identities=12% Similarity=-0.014 Sum_probs=109.9
Q ss_pred cCCCCcchHHHHHHHhhhcc-------------------------CCCccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVT-------------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~-------------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
-|||+++.+|+++++..... +.++.++ .+|++|.+++.+++++ +.
T Consensus 12 lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dv~~~~~v~~~~~~-----~~ 81 (259)
T 3edm_A 12 VVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAI-----KADLTNAAEVEAAISA-----AA 81 (259)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEE-----ECCTTCHHHHHHHHHH-----HH
T ss_pred EEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEE-----EcCCCCHHHHHHHHHH-----HH
Confidence 48999999999985532211 1123444 6899999998886654 33
Q ss_pred ccC-CCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHHcCC--CeEEEecCccccCCCCCCCCCCCCC
Q psy16545 63 CTH-DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSHGV--YQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 63 ~~~-~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
+.. ++|++|||||...... ..+++...+++|+.|+.++++++...-. .++|++||...+.. +
T Consensus 82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------~ 151 (259)
T 3edm_A 82 DKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG----------G 151 (259)
T ss_dssp HHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC----------C
T ss_pred HHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC----------C
Confidence 322 6999999999763222 2234567899999999999999977532 48999999876511 1
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc-CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.++ ++++++.++||.|..+.
T Consensus 152 ~-~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~ 194 (259)
T 3edm_A 152 G-PGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTF 194 (259)
T ss_dssp S-TTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC--
T ss_pred C-CCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcc
Confidence 2 456889999999999999999886 35999999999998874
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.22 E-value=1.7e-11 Score=121.51 Aligned_cols=149 Identities=9% Similarity=-0.051 Sum_probs=108.1
Q ss_pred cCCCC--cchHHHHHHHhhhccCCCccEEecccc-------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQ--GTSVLQLLRTFERVTGKPVPYIVEARR-------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~--~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||+ +|.+|+.+++... ..+.+++..+|+ .+|++|++++.+++++ +.+..
T Consensus 11 lVTGa~~s~gIG~aia~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g 83 (269)
T 2h7i_A 11 LVSGIITDSSIAFHIARVAQ--EQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGR-----VTEAIG 83 (269)
T ss_dssp EECCCSSTTSHHHHHHHHHH--HTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHH-----HHHHHC
T ss_pred EEECCCCCCchHHHHHHHHH--HCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHH-----HHHHhC
Confidence 48998 8889999855322 222233332321 5899999998885554 33322
Q ss_pred ---CCCEEEEcCcccCc---------ccCCCChhhhHHhHHHHHHHHHHHHHHcC--CCeEEEecCccccCCCCCCCCCC
Q psy16545 66 ---DIDCVIHFAAVKAV---------GESMQEPLMYYKNNLIATINLLEVMKSHG--VYQLVFSSSCTVYGEPQFLPITE 131 (600)
Q Consensus 66 ---~~d~Vih~A~~~~~---------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~r~I~~SS~~vyg~~~~~~~~E 131 (600)
++|+||||||.... ....+++...+++|+.++.++++++.+.- -.++|++||...++.
T Consensus 84 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~-------- 155 (269)
T 2h7i_A 84 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM-------- 155 (269)
T ss_dssp TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC--------
T ss_pred CCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccccc--------
Confidence 69999999997641 11234556789999999999999997641 258999998754332
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 132 DHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 132 ~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
...+.|+.||.+.+.+++.++.++ .++++++++||.+..+
T Consensus 156 -----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 197 (269)
T 2h7i_A 156 -----PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL 197 (269)
T ss_dssp -----TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred -----CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccch
Confidence 456889999999999999998775 3899999999988765
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.22 E-value=2.9e-11 Score=120.91 Aligned_cols=150 Identities=13% Similarity=0.050 Sum_probs=106.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++|.+|+.+.+... ..+.+++.++|+ .+|++|.+++.+++++ +.+.
T Consensus 32 lITGasggIG~~la~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~-----~~~~~ 104 (286)
T 1xu9_A 32 IVTGASKGIGREMAYHLA--KMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQ-----AGKLM 104 (286)
T ss_dssp EESSCSSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEeCCCcHHHHHHHHHHH--HCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHH-----HHHHc
Confidence 589999999999965322 222333333332 5899999888875543 2221
Q ss_pred CCCCEEEEc-CcccCccc---CCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHF-AAVKAVGE---SMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 65 ~~~d~Vih~-A~~~~~~~---~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
.++|+|||| ||...... ..++....+++|+.|+.++++++... +.+++|++||...+.. . .
T Consensus 105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~-~ 172 (286)
T 1xu9_A 105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA-----------Y-P 172 (286)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC-----------C-T
T ss_pred CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccC-----------C-C
Confidence 269999999 56543211 22345668999999999999987542 2369999999865532 2 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc----CCceEEEEecccccCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH----KEWNIISLRYFNPVGA 176 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~~~v~G~ 176 (600)
+.+.|+.||.+.+.+++.++.+. .++++++++||.+.++
T Consensus 173 ~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~ 215 (286)
T 1xu9_A 173 MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE 215 (286)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCCh
Confidence 56899999999999999887664 3899999999998776
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=2.1e-11 Score=123.16 Aligned_cols=192 Identities=17% Similarity=0.191 Sum_probs=128.3
Q ss_pred HhhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEec
Q psy16545 247 EQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSS 325 (600)
Q Consensus 247 ~~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~r~v~~S 325 (600)
..+...+++++.+|+.+++++.++++ ++|+|||+++... +.++.+++++|++.+ ++|||+ |
T Consensus 51 ~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S 112 (308)
T 1qyc_A 51 ESFKASGANIVHGSIDDHASLVEAVK--NVDVVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-S 112 (308)
T ss_dssp HHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-S
T ss_pred HHHHhCCCEEEEeccCCHHHHHHHHc--CCCEEEECCcchh---------------hhhHHHHHHHHHhcCCCceEee-c
Confidence 34446789999999999999999998 8999999998632 345789999999998 999984 3
Q ss_pred CcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCC
Q psy16545 326 SCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGN 405 (600)
Q Consensus 326 S~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~ 405 (600)
+||.. .+|..+..|..+.| .+| ...|.+++ ..+++++++||+.+.+ .+ ...
T Consensus 113 ---~~g~~----~~~~~~~~p~~~~y-~sK---~~~e~~~~----~~~~~~~~~r~~~~~~-----------~~---~~~ 163 (308)
T 1qyc_A 113 ---EFGND----VDNVHAVEPAKSVF-EVK---AKVRRAIE----AEGIPYTYVSSNCFAG-----------YF---LRS 163 (308)
T ss_dssp ---CCSSC----TTSCCCCTTHHHHH-HHH---HHHHHHHH----HHTCCBEEEECCEEHH-----------HH---TTT
T ss_pred ---ccccC----ccccccCCcchhHH-HHH---HHHHHHHH----hcCCCeEEEEeceecc-----------cc---ccc
Confidence 36532 23434444433578 888 66777665 4689999999865421 00 000
Q ss_pred CCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchh
Q psy16545 406 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQ 485 (600)
Q Consensus 406 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 485 (600)
... .+ ...+ .+.++++ +++++..
T Consensus 164 ~~~------~~-------------------~~~~------------------------~~~~~~~----~~~~~~~---- 186 (308)
T 1qyc_A 164 LAQ------AG-------------------LTAP------------------------PRDKVVI----LGDGNAR---- 186 (308)
T ss_dssp TTC------TT-------------------CSSC------------------------CSSEEEE----ETTSCCE----
T ss_pred ccc------cc-------------------ccCC------------------------CCCceEE----ecCCCce----
Confidence 000 00 0000 0111111 1223222
Q ss_pred hhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCC-ceeEeEcCC-CCCccHHHHHHHHhhhcCCccccccc
Q psy16545 486 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV-PYIFYNLGT-GQGTSVLQLLRTFERVTGKPVPYIVE 563 (600)
Q Consensus 486 ~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~-~~~~~nl~~-~~~~s~~e~~~~~~~~~g~~~~~~~~ 563 (600)
++|++ ++|+++++..++..+. .+++|++.+ ++.+|+.|+++++.+.+|.+.++...
T Consensus 187 --~~~i~--------------------~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~ 244 (308)
T 1qyc_A 187 --VVFVK--------------------EEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYV 244 (308)
T ss_dssp --EEEEC--------------------HHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEE
T ss_pred --EEEec--------------------HHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCceEeC
Confidence 67777 8999999998887653 367888865 47899999999999999987666555
Q ss_pred C
Q psy16545 564 A 564 (600)
Q Consensus 564 ~ 564 (600)
+
T Consensus 245 ~ 245 (308)
T 1qyc_A 245 P 245 (308)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.21 E-value=6.1e-11 Score=114.42 Aligned_cols=147 Identities=18% Similarity=0.099 Sum_probs=111.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------------cccccChHHhhhHHhhhhcccccccCCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------------EGDIVSMYANTDLAQKELGWSARCTHDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d 68 (600)
-|||+++-+|+.+++ .+...+.+++..||+ .+|++|++++++ +++..++|
T Consensus 13 lVTGas~GIG~aiA~--~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~---------~~~~g~iD 81 (247)
T 4hp8_A 13 LVTGANTGLGQAIAV--GLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKD---------SFTDAGFD 81 (247)
T ss_dssp EETTTTSHHHHHHHH--HHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTT---------SSTTTCCC
T ss_pred EEeCcCCHHHHHHHH--HHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHH---------HHHhCCCC
Confidence 589999999999855 333344444444443 579998888877 66656799
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcC-CCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG-VYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
++|||||...... +.+++...+++|+.|+..+.+++. +++ -.++|++||....-. . ...
T Consensus 82 iLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g-----------~-~~~ 149 (247)
T 4hp8_A 82 ILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQG-----------G-IRV 149 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------C-SSC
T ss_pred EEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCC-----------C-CCC
Confidence 9999999864322 335677899999999999998753 333 468999999754321 1 345
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
..|+.||.+...+++.++.++ .|++++.+.||.|-.|.
T Consensus 150 ~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~ 189 (247)
T 4hp8_A 150 PSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNN 189 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcc
Confidence 789999999999999999887 38999999999998773
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.21 E-value=5.3e-11 Score=122.04 Aligned_cols=150 Identities=11% Similarity=0.015 Sum_probs=110.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------------cccccChHHhhhHHhhhhcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------------EGDIVSMYANTDLAQKELGW 59 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------------~~Dl~~~~~~~~~~~~~~~~ 59 (600)
-|||+++.+|+.+++. +...+.+++.++|+ .+|++|.+++.+++++
T Consensus 49 lVTGas~GIG~aia~~--La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~---- 122 (346)
T 3kvo_A 49 FITGASRGIGKAIALK--AAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK---- 122 (346)
T ss_dssp EEETTTSHHHHHHHHH--HHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH----
T ss_pred EEeCCChHHHHHHHHH--HHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH----
Confidence 5899999999999653 33334444444433 4799999998886655
Q ss_pred ccccc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCC
Q psy16545 60 SARCT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPIT 130 (600)
Q Consensus 60 ~~~~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~ 130 (600)
+.+. .++|+||||||...... ..+++...+++|+.|+.++++++.. .+..+||++||...+...
T Consensus 123 -~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~------ 195 (346)
T 3kvo_A 123 -AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV------ 195 (346)
T ss_dssp -HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG------
T ss_pred -HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC------
Confidence 4332 26999999999864322 2244567899999999999999843 455799999997654321
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhc-CCceEEEEeccccc
Q psy16545 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAH-KEWNIISLRYFNPV 174 (600)
Q Consensus 131 E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~ 174 (600)
+. .+.+.|+.||.+.+.+++.++.++ .+++++.+.||.+.
T Consensus 196 ---~~-~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i 236 (346)
T 3kvo_A 196 ---WF-KQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAI 236 (346)
T ss_dssp ---GT-SSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCB
T ss_pred ---CC-CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcc
Confidence 12 456889999999999999999876 38999999998644
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=5.5e-11 Score=116.64 Aligned_cols=151 Identities=16% Similarity=0.084 Sum_probs=113.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------cccccChHHhhhHHhhhhcccccccC-CCCEEEEcCc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------EGDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAA 75 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~ 75 (600)
-|||+++-+|+.+++. +...+.+++..+|. .+|+++++++.+++++ +.++. ++|++|||||
T Consensus 15 lVTGas~GIG~aia~~--la~~Ga~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~G~iDilVnnAG 87 (261)
T 4h15_A 15 LITAGTKGAGAATVSL--FLELGAQVLTTARARPEGLPEELFVEADLTTKEGCAIVAEA-----TRQRLGGVDVIVHMLG 87 (261)
T ss_dssp EESCCSSHHHHHHHHH--HHHTTCEEEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHH-----HHHHTSSCSEEEECCC
T ss_pred EEeccCcHHHHHHHHH--HHHcCCEEEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHH-----HHHHcCCCCEEEECCC
Confidence 5899999999998663 33344555555553 5899999998887665 54443 5999999999
Q ss_pred ccCcc------cCCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHH
Q psy16545 76 VKAVG------ESMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKT 145 (600)
Q Consensus 76 ~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~s 145 (600)
..... .+.+++...+++|+.++.++.+++ ++.+-.++|++||....-. .+ .....|+.|
T Consensus 88 ~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~----------~~-~~~~~Y~as 156 (261)
T 4h15_A 88 GSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP----------LP-ESTTAYAAA 156 (261)
T ss_dssp CCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CT-TTCHHHHHH
T ss_pred CCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC----------CC-CccHHHHHH
Confidence 75321 123456779999999999998886 3445678999999754321 01 235789999
Q ss_pred HHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 146 KHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 146 K~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
|.+.+.+++.++.++ .|++++.+.||.|-.|
T Consensus 157 Kaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~ 189 (261)
T 4h15_A 157 KAALSTYSKAMSKEVSPKGVRVVRVSPGWIETE 189 (261)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCH
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCc
Confidence 999999999999886 3899999999999766
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=4.1e-11 Score=120.12 Aligned_cols=151 Identities=11% Similarity=0.047 Sum_probs=109.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecc-cc----------------------cccccChH-----------------
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEA-RR----------------------EGDIVSMY----------------- 47 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~-~~----------------------~~Dl~~~~----------------- 47 (600)
-|||++|.+|+.+++.. ...+.+++.++ |+ .+|+++.+
T Consensus 13 lVTGas~GIG~aia~~l--a~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~ 90 (291)
T 1e7w_A 13 LVTGAAKRLGRSIAEGL--HAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT 90 (291)
T ss_dssp EETTCSSHHHHHHHHHH--HHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred EEECCCchHHHHHHHHH--HHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccchHH
Confidence 48999999999986532 22233343333 22 57999888
Q ss_pred HhhhHHhhhhccccccc-CCCCEEEEcCcccCccc----C--------------CCChhhhHHhHHHHHHHHHHHHHH--
Q psy16545 48 ANTDLAQKELGWSARCT-HDIDCVIHFAAVKAVGE----S--------------MQEPLMYYKNNLIATINLLEVMKS-- 106 (600)
Q Consensus 48 ~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~~~~~~----~--------------~~~~~~~~~~Nv~gt~~ll~a~~~-- 106 (600)
++.+++++ +.+. .++|++|||||...... . .+++...+++|+.++.++++++..
T Consensus 91 ~v~~~~~~-----~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m 165 (291)
T 1e7w_A 91 RCAELVAA-----CYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV 165 (291)
T ss_dssp HHHHHHHH-----HHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-----HHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 77775544 3222 26999999999764321 1 234456899999999999998753
Q ss_pred --cC------CCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 107 --HG------VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 107 --~~------~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+ .+++|++||...+.. . .+.+.|+.||.+.+.+++.++.++ .+++++.++||.+..+
T Consensus 166 ~~~~~~~~~~~g~Iv~isS~~~~~~-----------~-~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 233 (291)
T 1e7w_A 166 AGTPAKHRGTNYSIINMVDAMTNQP-----------L-LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV 233 (291)
T ss_dssp HTSCGGGSCSCEEEEEECCTTTTSC-----------C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG
T ss_pred HhcCCCCCCCCcEEEEEechhhcCC-----------C-CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCC
Confidence 34 478999999865532 2 456899999999999999998775 3899999999999776
Q ss_pred C
Q psy16545 177 H 177 (600)
Q Consensus 177 ~ 177 (600)
.
T Consensus 234 ~ 234 (291)
T 1e7w_A 234 D 234 (291)
T ss_dssp G
T ss_pred c
Confidence 3
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.20 E-value=3e-11 Score=117.90 Aligned_cols=148 Identities=16% Similarity=0.090 Sum_probs=92.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHHhhhHHhhhhcccccccC-CCCEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYANTDLAQKELGWSARCTH-DIDCV 70 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~V 70 (600)
-|||++|.+|+.+++.. .. +..++.++|+ .+|+.+.+.... +.+ .++.. ++|+|
T Consensus 9 lITGas~gIG~~~a~~l--~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~-----~~~~~~~id~l 79 (245)
T 3e9n_A 9 VVTGATGGMGIEIVKDL--SR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEG-GVD-----KLKNLDHVDTL 79 (245)
T ss_dssp EEESTTSHHHHHHHHHH--TT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSS-SCG-----GGTTCSCCSEE
T ss_pred EEEcCCCHHHHHHHHHH--hC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHH-HHH-----HHHhcCCCCEE
Confidence 48999999999996643 33 3444544444 456666544221 111 22222 69999
Q ss_pred EEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChH
Q psy16545 71 IHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVY 142 (600)
Q Consensus 71 ih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y 142 (600)
|||||...... ..+++...+++|+.++.++++++. +.+ .++|++||...+.. . .+.+.|
T Consensus 80 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~-----------~-~~~~~Y 146 (245)
T 3e9n_A 80 VHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGP-----------H-PGNTIY 146 (245)
T ss_dssp EECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------------------CHHH
T ss_pred EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccC-----------C-CCchHH
Confidence 99999875422 223456789999999999988874 334 68999999876542 2 456899
Q ss_pred HHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 143 GKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 143 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.||.+.+.+++.++.++ .++++++++||.+.++.
T Consensus 147 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 183 (245)
T 3e9n_A 147 AASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPM 183 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCch
Confidence 999999999999998874 38999999999999884
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1.4e-10 Score=115.29 Aligned_cols=118 Identities=14% Similarity=0.194 Sum_probs=92.2
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc------ccccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG------ESMQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~------~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
++.++.+|+++.+++.++++.. ++|+|||+|+..... .+.++....++.|+.++.++++++... +
T Consensus 65 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 144 (278)
T 2bgk_A 65 VISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK 144 (278)
T ss_dssp TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT
T ss_pred ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC
Confidence 6889999999999998887642 689999999975321 122455678999999999999988763 5
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.+++|++||...|.... . ....|+.+| ...|.+++.++.+ ++++++.+||+.+
T Consensus 145 ~~~iv~isS~~~~~~~~----------~-~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 200 (278)
T 2bgk_A 145 KGSIVFTASISSFTAGE----------G-VSHVYTATK---HAVLGLTTSLCTELGEYGIRVNCVSPYIV 200 (278)
T ss_dssp CEEEEEECCGGGTCCCT----------T-SCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEESCC
T ss_pred CCeEEEEeeccccCCCC----------C-CCcchHHHH---HHHHHHHHHHHHHHhhcCcEEEEEEecee
Confidence 67999999998886421 0 236899999 6688888888765 5899999998763
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.19 E-value=3.2e-11 Score=119.80 Aligned_cols=150 Identities=11% Similarity=-0.029 Sum_probs=108.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------------cccccChHHhhhHHhhhhcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------------EGDIVSMYANTDLAQKELGW 59 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------------~~Dl~~~~~~~~~~~~~~~~ 59 (600)
-|||+++.+|+.+++.. ...+.+++..+|+ .+|++|.+++.+++++
T Consensus 10 lVTGas~GIG~aia~~l--a~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~---- 83 (274)
T 3e03_A 10 FITGASRGIGLAIALRA--ARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA---- 83 (274)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH----
T ss_pred EEECCCChHHHHHHHHH--HHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH----
Confidence 48999999999996533 2223333333332 5799999998886655
Q ss_pred ccccc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCC
Q psy16545 60 SARCT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPIT 130 (600)
Q Consensus 60 ~~~~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~ 130 (600)
+.+. .++|++|||||...... ..+++...+++|+.++.++++++.. .+..++|++||...+...
T Consensus 84 -~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------ 156 (274)
T 3e03_A 84 -TVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA------ 156 (274)
T ss_dssp -HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH------
T ss_pred -HHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC------
Confidence 3332 26999999999864322 2245667899999999999999754 345799999997654310
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEeccccc
Q psy16545 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPV 174 (600)
Q Consensus 131 E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~ 174 (600)
+. .+.+.|+.||.+.+.+++.++.++ .+++++.++||.+.
T Consensus 157 ---~~-~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v 198 (274)
T 3e03_A 157 ---WW-GAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVI 198 (274)
T ss_dssp ---HH-HHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCB
T ss_pred ---CC-CCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCccc
Confidence 01 345789999999999999998875 37999999998533
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.19 E-value=7.6e-11 Score=116.53 Aligned_cols=148 Identities=16% Similarity=0.049 Sum_probs=108.9
Q ss_pred cCCCCcchHHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
-|||+++.+|+.+++.....+ .++.++ .+|++|.+++.+++++ +.
T Consensus 31 lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~~~~~v~~~~~~-----~~ 100 (267)
T 3u5t_A 31 IVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTA-----QADVSDPAAVRRLFAT-----AE 100 (267)
T ss_dssp EEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEE-----ECCTTCHHHHHHHHHH-----HH
T ss_pred EEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEE-----EcCCCCHHHHHHHHHH-----HH
Confidence 489999999999855322111 123444 6899999998886654 33
Q ss_pred cc-CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 63 CT-HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 63 ~~-~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
+. .++|++|||||...... ..+++...+++|+.|+.++++++... .-.++|++||...+.. .
T Consensus 101 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~ 169 (267)
T 3u5t_A 101 EAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLL-----------H 169 (267)
T ss_dssp HHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHC-----------C
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccC-----------C
Confidence 32 26999999999864322 22345678899999999999998764 2258999999765432 2
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+..+.|+.||.+.+.+++.++.++ .+++++.++||.|..+.
T Consensus 170 -~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 212 (267)
T 3u5t_A 170 -PSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDL 212 (267)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcc
Confidence 456799999999999999999886 38999999999998874
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.6e-11 Score=122.29 Aligned_cols=191 Identities=14% Similarity=0.156 Sum_probs=127.1
Q ss_pred hhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecC
Q psy16545 248 QFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VYQLVFSSS 326 (600)
Q Consensus 248 ~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~r~v~~SS 326 (600)
.+...+++++.+|+.+++++.++++ ++|+|||+|+... +.++.+++++|++.| ++|||+ |
T Consensus 51 ~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S- 111 (307)
T 2gas_A 51 NYQSLGVILLEGDINDHETLVKAIK--QVDIVICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-S- 111 (307)
T ss_dssp HHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-S-
T ss_pred HHHhCCCEEEEeCCCCHHHHHHHHh--CCCEEEECCcccc---------------cccHHHHHHHHHhcCCceEEee-c-
Confidence 3334578999999999999999998 8999999998632 446789999999998 999984 3
Q ss_pred cccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCCC
Q psy16545 327 CTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNK 406 (600)
Q Consensus 327 ~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~ 406 (600)
+||.. .+|..+..|..+.| .+| ...|.+++ ..+++++++||+.+.+.....+ ..
T Consensus 112 --~~g~~----~~~~~~~~p~~~~y-~sK---~~~e~~~~----~~~i~~~~lrp~~~~~~~~~~~----------~~-- 165 (307)
T 2gas_A 112 --EFGLD----VDRHDAVEPVRQVF-EEK---ASIRRVIE----AEGVPYTYLCCHAFTGYFLRNL----------AQ-- 165 (307)
T ss_dssp --CCSSC----TTSCCCCTTHHHHH-HHH---HHHHHHHH----HHTCCBEEEECCEETTTTGGGT----------TC--
T ss_pred --ccccC----cccccCCCcchhHH-HHH---HHHHHHHH----HcCCCeEEEEcceeeccccccc----------cc--
Confidence 46632 23333433433578 899 66777665 4689999999876532110000 00
Q ss_pred CcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhh
Q psy16545 407 PVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQL 486 (600)
Q Consensus 407 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 486 (600)
.+ ...+ .+..+++ +++++. .
T Consensus 166 --------~~-------------------~~~~------------------------~~~~~~~----~~~~~~--~--- 185 (307)
T 2gas_A 166 --------LD-------------------ATDP------------------------PRDKVVI----LGDGNV--K--- 185 (307)
T ss_dssp --------TT-------------------CSSC------------------------CSSEEEE----ETTSCS--E---
T ss_pred --------cc-------------------cccC------------------------CCCeEEE----ecCCCc--c---
Confidence 00 0000 0111111 122222 2
Q ss_pred hhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCC-ceeEeEcCC-CCCccHHHHHHHHhhhcCCcccccccC
Q psy16545 487 LRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV-PYIFYNLGT-GQGTSVLQLLRTFERVTGKPVPYIVEA 564 (600)
Q Consensus 487 ~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~-~~~~~nl~~-~~~~s~~e~~~~~~~~~g~~~~~~~~~ 564 (600)
++|++ ++|+++++..++..+. .++.|++.+ ++.+|..|+++++++.+|.+.++...+
T Consensus 186 -~~~i~--------------------~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 244 (307)
T 2gas_A 186 -GAYVT--------------------EADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVS 244 (307)
T ss_dssp -EEEEC--------------------HHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEEEEEC
T ss_pred -eEEee--------------------HHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCceeecC
Confidence 66777 8899999998887653 367777765 478999999999999999876665544
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.18 E-value=4.8e-11 Score=117.35 Aligned_cols=151 Identities=13% Similarity=0.078 Sum_probs=113.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d 68 (600)
-|||+++-+|+.+++ .+...+..++..||+ .+|++|++++++++++ +.++. ++|
T Consensus 33 lVTGas~GIG~aiA~--~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~G~iD 105 (273)
T 4fgs_A 33 VITGATSGIGLAAAK--RFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEK-----VKAEAGRID 105 (273)
T ss_dssp EEESCSSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHH-----HHHHHSCEE
T ss_pred EEeCcCCHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHH-----HHHHcCCCC
Confidence 589999999999855 333334444444443 6899999999987666 54443 599
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChH
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVY 142 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y 142 (600)
++|||||...... +.+++...+++|+.|+.++++++... .-.++|++||....- +. +...+|
T Consensus 106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~-----------~~-~~~~~Y 173 (273)
T 4fgs_A 106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGST-----------GT-PAFSVY 173 (273)
T ss_dssp EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGS-----------CC-TTCHHH
T ss_pred EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhcc-----------CC-CCchHH
Confidence 9999999864322 23567789999999999999998653 124799999975432 12 446789
Q ss_pred HHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 143 GKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 143 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.||.+...+++.++.++ .|+++..+.||.|-.|.
T Consensus 174 ~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~ 210 (273)
T 4fgs_A 174 AASKAALRSFARNWILDLKDRGIRINTLSPGPTETTG 210 (273)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC--
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChh
Confidence 999999999999999887 38999999999998774
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.17 E-value=9.6e-11 Score=116.75 Aligned_cols=150 Identities=9% Similarity=-0.017 Sum_probs=109.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc-CCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT-HDID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d 68 (600)
-|||+++.+|+++++.. ...+.+++.++|+ .+|+++.+++.+++++ + +. .++|
T Consensus 34 lVTGas~GIG~aia~~l--~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~-----~-~~~~~id 105 (281)
T 3ppi_A 34 IVSGGAGGLGEATVRRL--HADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEA-----A-NQLGRLR 105 (281)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHH-----H-TTSSEEE
T ss_pred EEECCCChHHHHHHHHH--HHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHH-----H-HHhCCCC
Confidence 58999999999996532 2233344444433 6899999999886655 3 32 2689
Q ss_pred EEEEc-CcccCcc---------cCCCChhhhHHhHHHHHHHHHHHHHHc----------CCCeEEEecCccccCCCCCCC
Q psy16545 69 CVIHF-AAVKAVG---------ESMQEPLMYYKNNLIATINLLEVMKSH----------GVYQLVFSSSCTVYGEPQFLP 128 (600)
Q Consensus 69 ~Vih~-A~~~~~~---------~~~~~~~~~~~~Nv~gt~~ll~a~~~~----------~~~r~I~~SS~~vyg~~~~~~ 128 (600)
++||| |+..... ...+++...+++|+.++.++++++... +..++|++||...+..
T Consensus 106 ~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----- 180 (281)
T 3ppi_A 106 YAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG----- 180 (281)
T ss_dssp EEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC-----
T ss_pred eEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC-----
Confidence 99999 4443221 112235779999999999999987532 2358999999876532
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 129 ITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 129 ~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .+.+.|+.||.+.+.+++.++.++ .++++++++||.|..+.
T Consensus 181 ------~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 224 (281)
T 3ppi_A 181 ------Q-IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPI 224 (281)
T ss_dssp ------C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred ------C-CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchh
Confidence 2 456899999999999999998875 37999999999998763
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=7.1e-11 Score=115.46 Aligned_cols=151 Identities=14% Similarity=0.040 Sum_probs=111.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccC-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTH-D 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~ 66 (600)
-|||+++-+|+.++.. +...+..++..+|+ .+|+++++++.+++++ +.+++ +
T Consensus 11 lVTGas~GIG~aia~~--la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~-----~~~~~G~ 83 (258)
T 4gkb_A 11 IVTGGASGIGGAISMR--LAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQ-----TIATFGR 83 (258)
T ss_dssp EEETTTSHHHHHHHHH--HHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHH-----HHHHHSC
T ss_pred EEeCCCCHHHHHHHHH--HHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHH-----HHHHhCC
Confidence 4899999999888542 22223333333332 6899999998886665 55443 6
Q ss_pred CCEEEEcCcccCcc---cCCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVG---ESMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 67 ~d~Vih~A~~~~~~---~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+|++|||||..... ...+++...+++|+.++..+.+++... +-.++|++||...... . +...
T Consensus 84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~-----------~-~~~~ 151 (258)
T 4gkb_A 84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTG-----------Q-GNTS 151 (258)
T ss_dssp CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHC-----------C-SSCH
T ss_pred CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccC-----------C-CCch
Confidence 99999999975322 223457779999999999999887432 2268999999865421 1 3457
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.|+.||.+...+++.++.++ .|++++.+.||.|-.|.
T Consensus 152 ~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~ 190 (258)
T 4gkb_A 152 GYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPL 190 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChh
Confidence 89999999999999999876 38999999999998875
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.15 E-value=5.4e-11 Score=116.68 Aligned_cols=152 Identities=14% Similarity=0.005 Sum_probs=110.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEec-ccc---------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVE-ARR---------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~-~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||+++.+|+.+++.. ...+..++.+ +++ .+|+++.+++.+++++ +.+.
T Consensus 11 lITGas~gIG~~~a~~l--~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~ 83 (255)
T 3icc_A 11 LVTGASRGIGRAIAKRL--ANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSS-----LDNEL 83 (255)
T ss_dssp EETTCSSHHHHHHHHHH--HHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH-----HHHHH
T ss_pred EEECCCChHHHHHHHHH--HHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHH-----HHHHh
Confidence 48999999999996533 2233333322 111 4799998887775443 2211
Q ss_pred ------CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCC
Q psy16545 65 ------HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITED 132 (600)
Q Consensus 65 ------~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~ 132 (600)
..+|++|||||...... ..++++..+++|+.++.++++++... +..++|++||...+..
T Consensus 84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~--------- 154 (255)
T 3icc_A 84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS--------- 154 (255)
T ss_dssp HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC---------
T ss_pred cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC---------
Confidence 13999999999864322 22345668999999999999999765 3358999999866532
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAHP 178 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~ 178 (600)
. +..+.|+.||.+.+.+++.++.++ .+++++.++||.+..+..
T Consensus 155 --~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 199 (255)
T 3icc_A 155 --L-PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMN 199 (255)
T ss_dssp --C-TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSS
T ss_pred --C-CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccch
Confidence 2 456889999999999999998875 389999999999998853
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.7e-10 Score=122.42 Aligned_cols=151 Identities=13% Similarity=0.006 Sum_probs=113.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-C-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-D-I 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~-~ 67 (600)
-|||++|.+|..+++... ..+.+++.++++ .+|++|.+++.+++++ +.+.. + +
T Consensus 217 LVTGgsgGIG~aiA~~La--~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~-----~~~~~g~~i 289 (454)
T 3u0b_A 217 VVTGAARGIGATIAEVFA--RDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAH-----VTEHHGGKV 289 (454)
T ss_dssp EESSCSSHHHHHHHHHHH--HTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHH-----HHHHSTTCC
T ss_pred EEeCCchHHHHHHHHHHH--HCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHH-----HHHHcCCCc
Confidence 589999999999966432 234445544543 5899999998886655 43333 3 9
Q ss_pred CEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHHHc----CCCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSH----GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 68 d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
|+||||||..... ...+++...+++|+.|+.+|.+++... +..+||++||...+.. . ...
T Consensus 290 d~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g-----------~-~g~ 357 (454)
T 3u0b_A 290 DILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAG-----------N-RGQ 357 (454)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHC-----------C-TTC
T ss_pred eEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCC-----------C-CCC
Confidence 9999999987532 223456678999999999999999875 5579999999755421 1 456
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.|+.||.+.+.+++.++.+. .|+++++++||.+..+.
T Consensus 358 ~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 397 (454)
T 3u0b_A 358 TNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKM 397 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChh
Confidence 899999999999999888764 38999999999998874
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.4e-10 Score=124.28 Aligned_cols=144 Identities=15% Similarity=0.133 Sum_probs=107.1
Q ss_pred cCCCCcchHHHHHHHhhhccC----------------------------CCccEEecccccccccChHHhhhHHhhhhcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG----------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGW 59 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~----------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 59 (600)
-|||++|.+|..+.+.....+ .++.++ .+|++|.+++.+++++
T Consensus 230 LITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~-----~~Dv~d~~~v~~~~~~---- 300 (486)
T 2fr1_A 230 LVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVA-----ACDVTDRESVRELLGG---- 300 (486)
T ss_dssp EEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEE-----ECCTTCHHHHHHHHHT----
T ss_pred EEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEE-----EeCCCCHHHHHHHHHH----
Confidence 589999999999865322111 123445 6899999998885554
Q ss_pred cccccCCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCcc-ccCCCCCCCCCCCCC
Q psy16545 60 SARCTHDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCT-VYGEPQFLPITEDHP 134 (600)
Q Consensus 60 ~~~~~~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~-vyg~~~~~~~~E~~~ 134 (600)
+-+...+|+|||+||...... ..++....+++|+.|+.+|.+++.+.+.++||++||.. ++|.
T Consensus 301 -i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~----------- 368 (486)
T 2fr1_A 301 -IGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGA----------- 368 (486)
T ss_dssp -SCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCC-----------
T ss_pred -HHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCC-----------
Confidence 311125899999999865321 23445668899999999999999988889999999974 4443
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGA 176 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~ 176 (600)
...+.|+.+|...+.+.+.+... |+++++++||.+.++
T Consensus 369 --~g~~~Yaaaka~l~~la~~~~~~--gi~v~~i~pG~~~~~ 406 (486)
T 2fr1_A 369 --PGLGGYAPGNAYLDGLAQQRRSD--GLPATAVAWGTWAGS 406 (486)
T ss_dssp --TTCTTTHHHHHHHHHHHHHHHHT--TCCCEEEEECCBC--
T ss_pred --CCCHHHHHHHHHHHHHHHHHHhc--CCeEEEEECCeeCCC
Confidence 34578999999999988876653 899999999999876
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.5e-10 Score=124.65 Aligned_cols=141 Identities=16% Similarity=0.080 Sum_probs=105.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCc-cEEecccc------------------------cccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPV-PYIVEARR------------------------EGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~-~~~~~~~~------------------------~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
-|||++|.+|..+.+... ..+. +++.++|+ .+|++|.+++.+ ++
T Consensus 263 LITGgtGgIG~~lA~~La--~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~---------~~ 331 (511)
T 2z5l_A 263 LITGGMGAIGRRLARRLA--AEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAA---------LV 331 (511)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHH---------HH
T ss_pred EEECCCCHHHHHHHHHHH--hCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHH---------HH
Confidence 589999999999865332 1222 12222221 589999999888 55
Q ss_pred ccCCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc-CCCeEEEecCcc-ccCCCCCCCCCCCCCCC
Q psy16545 63 CTHDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCT-VYGEPQFLPITEDHPTG 136 (600)
Q Consensus 63 ~~~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~r~I~~SS~~-vyg~~~~~~~~E~~~~~ 136 (600)
+...+|+||||||...... ..++....+++|+.|+.+|.+++.+. +.++||++||.. ++|.
T Consensus 332 ~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~------------- 398 (511)
T 2z5l_A 332 TAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGN------------- 398 (511)
T ss_dssp HHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCC-------------
T ss_pred hcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCC-------------
Confidence 4346999999999875321 22345668899999999999999876 778999999974 4553
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhcCCceEEEEeccccc
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPV 174 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~ 174 (600)
...+.|+.+|...+.+++.+... |+++++++||.+-
T Consensus 399 ~g~~~YaaaKa~ld~la~~~~~~--gi~v~sv~pG~~~ 434 (511)
T 2z5l_A 399 AGQGAYAAANAALDALAERRRAA--GLPATSVAWGLWG 434 (511)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHTT--TCCCEEEEECCBC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHc--CCcEEEEECCccc
Confidence 34579999999999999877543 8999999998874
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.09 E-value=5e-11 Score=116.70 Aligned_cols=122 Identities=14% Similarity=0.046 Sum_probs=90.5
Q ss_pred EEeecCChhhHHHHhhcC--CccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecCcccc
Q psy16545 257 YSCDLVDKNRLGEIFAKH--DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH----GVYQLVFSSSCTVY 330 (600)
Q Consensus 257 i~~Dl~~~~~l~~~l~~~--~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~~r~v~~SS~~vY 330 (600)
+.+|+.+.+++.++++.. ++|+|||+|+.... ..++...+++|+.++.++++++.+. +.+|+|++||.++|
T Consensus 42 ~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 118 (255)
T 2dkn_A 42 LSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAAT 118 (255)
T ss_dssp TTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred ccCCcccHHHHHHHHHHcCCCccEEEECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccc
Confidence 457888888888887654 79999999997542 3467889999999999999988764 56899999999999
Q ss_pred cCCCCC-CC-------CCCCCC------CCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 331 GEPQFL-PI-------TEDHPT------GNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 331 g~~~~~-~~-------~E~~~~------~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+..... +. +|+.+. .+..+.|+.+| ...|.+++.++.. ++++++++||+.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK---~a~~~~~~~~~~~~~~~gi~v~~v~pg~v 186 (255)
T 2dkn_A 119 QPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSK---YAVTCLARRNVVDWAGRGVRLNVVAPGAV 186 (255)
T ss_dssp STTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHH---HHHHHHHHHTHHHHHHTTCEEEEEEECCB
T ss_pred cccccccchhhhhcccchhhhhhhccccCCcchhHHHHH---HHHHHHHHHHHHHHhhcCcEEEEEcCCcc
Confidence 754211 11 111100 02236899999 7788888888765 6899999998763
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=4.1e-10 Score=113.33 Aligned_cols=119 Identities=13% Similarity=-0.011 Sum_probs=92.7
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc----cccccChHHHHHHHHHHHHHHHHHHHHc-----
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV----GESMQEPLMYYKNNLIATINLLEVMKSH----- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----- 316 (600)
+.++.++.+|+++.+++.++++.. ++|+|||+|+.... ....++....+++|+.++.++++++...
T Consensus 75 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 154 (302)
T 1w6u_A 75 GNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQ 154 (302)
T ss_dssp SSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Confidence 567899999999999988877653 57999999996533 2233456778999999999998887642
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+..++|++||...+... +....|+.|| ...|.+++.++.. ++++++.+||+.+
T Consensus 155 ~~~~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~~~~~~gi~v~~v~Pg~v 210 (302)
T 1w6u_A 155 KGAAFLSITTIYAETGS------------GFVVPSASAK---AGVEAMSKSLAAEWGKYGMRFNVIQPGPI 210 (302)
T ss_dssp CCEEEEEECCTHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred CCCEEEEEcccccccCC------------CCcchhHHHH---HHHHHHHHHHHHHhhhcCcEEEEEeeccC
Confidence 34699999998776421 2237899999 7788899888876 7899999998764
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.07 E-value=2.4e-10 Score=111.03 Aligned_cols=105 Identities=10% Similarity=-0.028 Sum_probs=86.9
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE 332 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~ 332 (600)
+++++.+|+.+.+.+.++++ ++|+|||+|+..... .++...++.|+.++.++++++++.++++||++||.++|+.
T Consensus 64 ~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~~~~---~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~ 138 (242)
T 2bka_A 64 NVNQEVVDFEKLDDYASAFQ--GHDVGFCCLGTTRGK---AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS 138 (242)
T ss_dssp GCEEEECCGGGGGGGGGGGS--SCSEEEECCCCCHHH---HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT
T ss_pred CceEEecCcCCHHHHHHHhc--CCCEEEECCCccccc---CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC
Confidence 57889999999999999887 899999999864322 2456788999999999999999999999999999999862
Q ss_pred CCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCC-CCeeEeecc
Q psy16545 333 PQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGN-KPVPYIFYN 383 (600)
Q Consensus 333 ~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~-~~~~~r~~~ 383 (600)
+ .++|+.+| ...|.+++. .++ +++++||+.
T Consensus 139 -------------~-~~~Y~~sK---~~~e~~~~~----~~~~~~~~vrpg~ 169 (242)
T 2bka_A 139 -------------S-NFLYLQVK---GEVEAKVEE----LKFDRYSVFRPGV 169 (242)
T ss_dssp -------------C-SSHHHHHH---HHHHHHHHT----TCCSEEEEEECCE
T ss_pred -------------C-cchHHHHH---HHHHHHHHh----cCCCCeEEEcCce
Confidence 1 26899999 667777764 477 499999876
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=6e-10 Score=109.05 Aligned_cols=119 Identities=13% Similarity=0.102 Sum_probs=92.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc---ccccChHHHHHHHHHHHHHHHHHHH----HcCC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG---ESMQEPLMYYKNNLIATINLLEVMK----SHGV 318 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~~~----~~~~ 318 (600)
+..+.++.+|+++++++.++++.. ++|+|||+|+..... .+.+++...++.|+.++.++++++. +.+.
T Consensus 59 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~ 138 (255)
T 1fmc_A 59 GGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGG 138 (255)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 456889999999999988887642 789999999975432 2334557788999999999999885 3467
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+++|++||...|... +....|+.+| ...|.+++.++... ++++..+||+.+
T Consensus 139 ~~iv~~sS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v 192 (255)
T 1fmc_A 139 GVILTITSMAAENKN------------INMTSYASSK---AAASHLVRNMAFDLGEKNIRVNGIAPGAI 192 (255)
T ss_dssp EEEEEECCGGGTCCC------------TTCHHHHHHH---HHHHHHHHHHHHHHHTTTEEEEEEEECSB
T ss_pred cEEEEEcchhhcCCC------------CCCcccHHHH---HHHHHHHHHHHHHhhhcCcEEEEEecccC
Confidence 899999998877531 1237899999 67888888887664 788888888763
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=1.9e-10 Score=115.56 Aligned_cols=100 Identities=11% Similarity=-0.071 Sum_probs=78.0
Q ss_pred CCCEEEEcCcccC--c----ccCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKA--V----GESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~--~----~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|++|||||... . ....+++...+++|+.|+.++++++... .-+++|++||...+.. . +
T Consensus 119 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~-----------~-~ 186 (297)
T 1d7o_A 119 SIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI-----------I-P 186 (297)
T ss_dssp CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC-----------C-T
T ss_pred CCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccccC-----------C-C
Confidence 6999999998642 1 1223456779999999999999999764 1258999999765431 1 2
Q ss_pred CC-ChHHHHHHHHHHHHHHHHhhc---CCceEEEEecccccCCC
Q psy16545 138 IK-NVYGKTKHFIEEMLKDLSKAH---KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~-s~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~~ 177 (600)
.. +.|+.||.+.+.+++.++.++ .+++++.++||.|.++.
T Consensus 187 ~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~ 230 (297)
T 1d7o_A 187 GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRA 230 (297)
T ss_dssp TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCC
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccch
Confidence 33 589999999999999998763 28999999999999985
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=6.5e-10 Score=118.79 Aligned_cols=145 Identities=15% Similarity=0.092 Sum_probs=110.5
Q ss_pred cCCCCcchHHHHHHHhhhccC----------------------------CCccEEecccccccccChHHhhhHHhhhhcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG----------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGW 59 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~----------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 59 (600)
-|||++|.+|..+++.....+ .++.++ .+|++|.+++.+++++
T Consensus 243 LITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~-----~~Dvtd~~~v~~~~~~---- 313 (496)
T 3mje_A 243 LVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIA-----ACDAADREALAALLAE---- 313 (496)
T ss_dssp EEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEE-----ECCTTCHHHHHHHHHT----
T ss_pred EEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEE-----EccCCCHHHHHHHHHH----
Confidence 589999999999865322111 123444 6899999999986655
Q ss_pred cccccCCCCEEEEcCccc-Cccc----CCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccc-cCCCCCCCCCCCC
Q psy16545 60 SARCTHDIDCVIHFAAVK-AVGE----SMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV-YGEPQFLPITEDH 133 (600)
Q Consensus 60 ~~~~~~~~d~Vih~A~~~-~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~v-yg~~~~~~~~E~~ 133 (600)
+.+...+|+|||+||.. .... ..++....+++|+.|+.+|.+++.+...++||++||... +|.
T Consensus 314 -i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~---------- 382 (496)
T 3mje_A 314 -LPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGS---------- 382 (496)
T ss_dssp -CCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTC----------
T ss_pred -HHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCC----------
Confidence 44334699999999986 3211 223456799999999999999999988889999999644 443
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~ 177 (600)
...+.|+.||...+.+.+.+... |++++++.||.+.++.
T Consensus 383 ---~g~~~YaAaKa~ldala~~~~~~--Gi~v~sV~pG~w~~~g 421 (496)
T 3mje_A 383 ---GGQPGYAAANAYLDALAEHRRSL--GLTASSVAWGTWGEVG 421 (496)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHT--TCCCEEEEECEESSSC
T ss_pred ---CCcHHHHHHHHHHHHHHHHHHhc--CCeEEEEECCcccCCc
Confidence 45688999999999999877653 8999999999887764
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.2e-10 Score=107.30 Aligned_cols=115 Identities=12% Similarity=0.083 Sum_probs=91.4
Q ss_pred eEEEeecCChhhHHHHhhc-CCccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccc
Q psy16545 255 DFYSCDLVDKNRLGEIFAK-HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 329 (600)
Q Consensus 255 ~~i~~Dl~~~~~l~~~l~~-~~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~v 329 (600)
+++.+|+++++++.++++. .++|+|||+|+..... .+.++....++.|+.++.++++++++.+.++||++||...
T Consensus 45 ~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~ 124 (207)
T 2yut_A 45 RALPADLADELEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPR 124 (207)
T ss_dssp EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHH
T ss_pred cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhh
Confidence 7889999999999888863 3689999999975432 1345667889999999999999997666789999999988
Q ss_pred ccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 330 YGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 330 Yg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
|... +....|+.+| ...|.+++.++.+ ++++++.+||+.+
T Consensus 125 ~~~~------------~~~~~Y~~sK---~a~~~~~~~~~~~~~~~gi~v~~v~pg~v 167 (207)
T 2yut_A 125 YVQV------------PGFAAYAAAK---GALEAYLEAARKELLREGVHLVLVRLPAV 167 (207)
T ss_dssp HHSS------------TTBHHHHHHH---HHHHHHHHHHHHHHHTTTCEEEEECCCCB
T ss_pred ccCC------------CCcchHHHHH---HHHHHHHHHHHHHHhhhCCEEEEEecCcc
Confidence 8531 2247899999 6788888888876 5899999997653
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1.8e-09 Score=106.15 Aligned_cols=121 Identities=12% Similarity=0.060 Sum_probs=92.6
Q ss_pred hhCCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc---
Q psy16545 249 FTGKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--- 316 (600)
Q Consensus 249 l~~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~--- 316 (600)
..+..+.++.+|+++++++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++...
T Consensus 51 ~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 130 (259)
T 4e6p_A 51 EIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIA 130 (259)
T ss_dssp HHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 34667899999999999988877653 6999999999754332 23455677889999999999988653
Q ss_pred -C-CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 317 -G-VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 317 -~-~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+ ..++|++||.+.+... +....|+.|| ...+.+.+.++.+. ++++..++|+.+
T Consensus 131 ~~~~g~iv~isS~~~~~~~------------~~~~~Y~asK---~a~~~~~~~la~e~~~~gi~vn~v~PG~v 188 (259)
T 4e6p_A 131 QGRGGKIINMASQAGRRGE------------ALVAIYCATK---AAVISLTQSAGLDLIKHRINVNAIAPGVV 188 (259)
T ss_dssp HTSCEEEEEECCGGGTSCC------------TTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred cCCCeEEEEECChhhccCC------------CCChHHHHHH---HHHHHHHHHHHHHhhhcCCEEEEEEECCC
Confidence 2 3599999998766321 2247899999 67888888888664 788888888764
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.99 E-value=2.9e-09 Score=105.80 Aligned_cols=117 Identities=16% Similarity=0.111 Sum_probs=88.0
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc--------cccChHHHHHHHHHHHHHHHHHHHHc--
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE--------SMQEPLMYYKNNLIATINLLEVMKSH-- 316 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~~~~~~-- 316 (600)
.++.++.+|+++++++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++...
T Consensus 58 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 137 (278)
T 1spx_A 58 QNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLS 137 (278)
T ss_dssp GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceeEEecccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 45789999999999988877642 6899999999753221 33455678999999999999988764
Q ss_pred --CCCEEEEecCccc-ccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 --GVYQLVFSSSCTV-YGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 --~~~r~v~~SS~~v-Yg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+ +++|++||.+. +... +....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 138 ~~~-g~iv~isS~~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 195 (278)
T 1spx_A 138 STK-GEIVNISSIASGLHAT------------PDFPYYSIAK---AAIDQYTRNTAIDLIQHGIRVNSISPGLV 195 (278)
T ss_dssp HHT-CEEEEECCTTSSSSCC------------TTSHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECCB
T ss_pred hcC-CeEEEEecccccccCC------------CCccHHHHHH---HHHHHHHHHHHHHHHhcCcEEEEEecCcc
Confidence 5 79999999876 5321 2236899999 6678888887754 5899999998764
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.97 E-value=9.7e-10 Score=121.32 Aligned_cols=146 Identities=13% Similarity=0.080 Sum_probs=103.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccc---------c------------------cccccChHHhhhHHhhhhccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEAR---------R------------------EGDIVSMYANTDLAQKELGWS 60 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~---------~------------------~~Dl~~~~~~~~~~~~~~~~~ 60 (600)
-|||+++.+|+.+++ .+...+..++..|+ + .+|+.+.+++.+++++
T Consensus 23 lVTGas~GIG~aiA~--~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~----- 95 (613)
T 3oml_A 23 VVTGAGAGLGREYAL--LFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIET----- 95 (613)
T ss_dssp EETTTTSHHHHHHHH--HHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC------
T ss_pred EEeCCCcHHHHHHHH--HHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHH-----
Confidence 489999999999966 44445667776665 1 2577777777765444
Q ss_pred ccccC-CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccc-cCCCCCCCCC
Q psy16545 61 ARCTH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTV-YGEPQFLPIT 130 (600)
Q Consensus 61 ~~~~~-~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~v-yg~~~~~~~~ 130 (600)
+.+.. ++|++|||||...... ..+++...+++|+.|+.++++++ ++.+..+||++||... ++.
T Consensus 96 ~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~------- 168 (613)
T 3oml_A 96 AIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGN------- 168 (613)
T ss_dssp ---------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCC-------
T ss_pred HHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC-------
Confidence 43332 5999999999874322 23456779999999999999998 4455679999999754 332
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccc
Q psy16545 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNP 173 (600)
Q Consensus 131 E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v 173 (600)
...+.|+.||.+.+.+++.++.+. .++.++.+.||.+
T Consensus 169 ------~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~ 207 (613)
T 3oml_A 169 ------FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA 207 (613)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred ------CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence 456889999999999999998775 3899999999864
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.96 E-value=4.2e-09 Score=102.33 Aligned_cols=117 Identities=12% Similarity=0.016 Sum_probs=91.4
Q ss_pred ceeEEEeecCChhhHHHHhhcC-CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C-CCEEE
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G-VYQLV 322 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----~-~~r~v 322 (600)
+++++.+|+++.+++.++++.. ++|+|||+|+...... +.++....++.|+.++.++++++... + .++||
T Consensus 53 ~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv 132 (244)
T 1cyd_A 53 GIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIV 132 (244)
T ss_dssp TCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCcEEecCCCHHHHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 4677899999999999988754 4899999999754221 23455678899999999999888754 4 57999
Q ss_pred EecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 323 FSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 323 ~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
++||...|... +....|+.|| ...|.+++.++.+ .++++..+||+.+
T Consensus 133 ~~sS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~~a~~~~~~gi~v~~v~pg~v 182 (244)
T 1cyd_A 133 NVSSMVAHVTF------------PNLITYSSTK---GAMTMLTKAMAMELGPHKIRVNSVNPTVV 182 (244)
T ss_dssp EECCGGGTSCC------------TTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred EEcchhhcCCC------------CCcchhHHHH---HHHHHHHHHHHHHhhhcCeEEEEEecCcc
Confidence 99999887532 2236899999 7788999888876 5788888998764
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.95 E-value=9e-10 Score=109.67 Aligned_cols=117 Identities=12% Similarity=0.022 Sum_probs=89.0
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc-----cccccChHHHHHHHHHHHHHHHHHHHHc----CC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMKSH----GV 318 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~ 318 (600)
.+.++.+|+++++++.++++.. ++|++||+|+.... ..+.++....+++|+.++.++++++... +-
T Consensus 64 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~ 143 (281)
T 3svt_A 64 AIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGG 143 (281)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 6889999999999988887753 68999999997322 1223445678899999999999988754 33
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
.++|++||.+.+... +....|+.|| ...+.+++.++.+. ++++..++|+.+
T Consensus 144 g~iv~isS~~~~~~~------------~~~~~Y~asK---~a~~~l~~~la~e~~~~gi~vn~v~PG~v 197 (281)
T 3svt_A 144 GSFVGISSIAASNTH------------RWFGAYGVTK---SAVDHLMQLAADELGASWVRVNSIRPGLI 197 (281)
T ss_dssp EEEEEECCHHHHSCC------------TTCTHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred cEEEEEeCHHHcCCC------------CCChhHHHHH---HHHHHHHHHHHHHhhhcCeEEEEEEeCcC
Confidence 499999998877431 2237899999 67888888888764 477778887653
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=98.94 E-value=4.2e-09 Score=103.27 Aligned_cols=126 Identities=14% Similarity=-0.034 Sum_probs=94.4
Q ss_pred CccEEecccccccccChHHhhhHHhhhhcccccccC-CCCEEEEcCcccCccc--------CCCChhhhHHhHHHHHHHH
Q psy16545 30 PVPYIVEARREGDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAAVKAVGE--------SMQEPLMYYKNNLIATINL 100 (600)
Q Consensus 30 ~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~~~~~--------~~~~~~~~~~~Nv~gt~~l 100 (600)
++.++ .+|+++++++.+++++ +.+.. ++|++|||||...... ..+++...+++|+.++..+
T Consensus 59 ~~~~~-----~~Dv~~~~~v~~~~~~-----~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~ 128 (256)
T 4fs3_A 59 EAHLY-----QIDVQSDEEVINGFEQ-----IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIV 128 (256)
T ss_dssp SCEEE-----ECCTTCHHHHHHHHHH-----HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred cEEEE-----EccCCCHHHHHHHHHH-----HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 45555 7899999998886665 44433 6999999999764321 1123445678999999999
Q ss_pred HHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 101 LEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 101 l~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+++... .-.++|++||....- +. +....|+.||.+.+.+++.++.++ .|++++.+.||.+-.+
T Consensus 129 ~~~~~~~~~~~G~IVnisS~~~~~-----------~~-~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~ 196 (256)
T 4fs3_A 129 AHEAKKLMPEGGSIVATTYLGGEF-----------AV-QNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTL 196 (256)
T ss_dssp HHHHHTTCTTCEEEEEEECGGGTS-----------CC-TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSG
T ss_pred HHHHHHHhccCCEEEEEecccccc-----------Cc-ccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCCh
Confidence 8888654 225899999975432 22 456889999999999999999886 3899999999999877
Q ss_pred C
Q psy16545 177 H 177 (600)
Q Consensus 177 ~ 177 (600)
.
T Consensus 197 ~ 197 (256)
T 4fs3_A 197 S 197 (256)
T ss_dssp G
T ss_pred h
Confidence 4
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=7.3e-09 Score=101.96 Aligned_cols=119 Identities=11% Similarity=0.110 Sum_probs=92.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+.++.++.+|+++.+++.++++.. ++|++||+|+...... ..++....+++|+.++.++++++. +.+
T Consensus 56 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 135 (263)
T 3ai3_A 56 GVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG 135 (263)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 557889999999999988877643 6899999999754221 234556778999999999988875 346
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.+++|++||.+.|... +....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 136 ~g~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 190 (263)
T 3ai3_A 136 GGAIIHNASICAVQPL------------WYEPIYNVTK---AALMMFSKTLATEVIKDNIRVNCINPGLI 190 (263)
T ss_dssp CEEEEEECCGGGTSCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred CcEEEEECchhhcCCC------------CCcchHHHHH---HHHHHHHHHHHHHhhhcCcEEEEEecCcc
Confidence 6899999999887532 2236899999 6678888888765 6899999998764
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.92 E-value=6.4e-09 Score=102.18 Aligned_cols=119 Identities=12% Similarity=0.055 Sum_probs=91.7
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCCC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVY 319 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~----~~~~~~ 319 (600)
.+.++.+|+++++++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++ ++.+..
T Consensus 69 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g 148 (260)
T 3un1_A 69 DIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSG 148 (260)
T ss_dssp TEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc
Confidence 5789999999999988887753 7999999999764322 33455677889999999999987 455667
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
++|++||...+.... .+....|+.|| ...+.+.+.++.+. |+++..++|+.+
T Consensus 149 ~iv~isS~~~~~~~~----------~~~~~~Y~~sK---aa~~~l~~~la~e~~~~gI~vn~v~PG~v 203 (260)
T 3un1_A 149 HIVSITTSLVDQPMV----------GMPSALASLTK---GGLNAVTRSLAMEFSRSGVRVNAVSPGVI 203 (260)
T ss_dssp EEEEECCTTTTSCBT----------TCCCHHHHHHH---HHHHHHHHHHHHHTTTTTEEEEEEEECCB
T ss_pred EEEEEechhhccCCC----------CCccHHHHHHH---HHHHHHHHHHHHHhCcCCeEEEEEeecCC
Confidence 999999987764321 11237899999 67889999988876 788888887653
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.91 E-value=2.6e-09 Score=115.48 Aligned_cols=114 Identities=14% Similarity=0.151 Sum_probs=88.6
Q ss_pred cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHcC-----CC
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHG-----VY 110 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~-----~~ 110 (600)
.+|++|.+++.+++++ +.+...+|+||||||...... ..++....+++|+.|+.+|.+++.... ..
T Consensus 321 ~~Dvtd~~~v~~~~~~-----i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~ 395 (525)
T 3qp9_A 321 TCDLTDAEAAARLLAG-----VSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPP 395 (525)
T ss_dssp ECCTTSHHHHHHHHHT-----SCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCC
T ss_pred ECCCCCHHHHHHHHHH-----HHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCC
Confidence 6899999999986655 432235999999999875322 223456789999999999999998765 67
Q ss_pred eEEEecCcccc-CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccc
Q psy16545 111 QLVFSSSCTVY-GEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNP 173 (600)
Q Consensus 111 r~I~~SS~~vy-g~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v 173 (600)
+||++||...+ |. ...+.|+.||...+.+.+++... |++++++.||.+
T Consensus 396 ~iV~~SS~a~~~g~-------------~g~~~YaaaKa~l~~lA~~~~~~--gi~v~sI~pG~~ 444 (525)
T 3qp9_A 396 VLVLFSSVAAIWGG-------------AGQGAYAAGTAFLDALAGQHRAD--GPTVTSVAWSPW 444 (525)
T ss_dssp EEEEEEEGGGTTCC-------------TTCHHHHHHHHHHHHHHTSCCSS--CCEEEEEEECCB
T ss_pred EEEEECCHHHcCCC-------------CCCHHHHHHHHHHHHHHHHHHhC--CCCEEEEECCcc
Confidence 99999997543 32 45688999999999887655432 899999999988
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.6e-09 Score=109.76 Aligned_cols=99 Identities=14% Similarity=-0.027 Sum_probs=76.1
Q ss_pred CCCEEEEcCcccC--c----ccCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKA--V----GESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~--~----~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|++|||||... . ....+++...+++|+.|+.++++++... .-+++|++||...+.. . .
T Consensus 120 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~-----------~-~ 187 (315)
T 2o2s_A 120 NIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERV-----------V-P 187 (315)
T ss_dssp SEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSC-----------C-T
T ss_pred CCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEeccccccc-----------C-C
Confidence 6999999999642 1 1123456678999999999999998654 1158999999765432 1 2
Q ss_pred CC-ChHHHHHHHHHHHHHHHHhhc---CCceEEEEecccccCC
Q psy16545 138 IK-NVYGKTKHFIEEMLKDLSKAH---KEWNIISLRYFNPVGA 176 (600)
Q Consensus 138 p~-s~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~ 176 (600)
.. ..|+.||.+.+.+++.++.++ .+++++.++||.|..+
T Consensus 188 ~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~ 230 (315)
T 2o2s_A 188 GYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSR 230 (315)
T ss_dssp TCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccch
Confidence 23 589999999999999998773 3899999999998765
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.88 E-value=6.5e-09 Score=102.78 Aligned_cols=118 Identities=14% Similarity=0.086 Sum_probs=92.5
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHHc---CC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSH---GV 318 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~---~~ 318 (600)
+.++.++.+|+++++++.++++.. ++|+|||+|+..... ...++....++.|+.++.++++++... +
T Consensus 70 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~- 148 (274)
T 1ja9_A 70 GAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG- 148 (274)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-
Confidence 556889999999999988877642 689999999975422 223445678999999999999998875 4
Q ss_pred CEEEEecCcccc-cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVY-GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vY-g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
++||++||.+.| ... +....|+.+| ...|.+++.++.+. +++++.++|+.+
T Consensus 149 ~~iv~~sS~~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v 203 (274)
T 1ja9_A 149 GRIILTSSIAAVMTGI------------PNHALYAGSK---AAVEGFCRAFAVDCGAKGVTVNCIAPGGV 203 (274)
T ss_dssp EEEEEECCGGGTCCSC------------CSCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECCB
T ss_pred CEEEEEcChHhccCCC------------CCCchHHHHH---HHHHHHHHHHHHHhhhcCeEEEEEeeCcc
Confidence 699999998877 321 2236899999 77889998888764 888999998764
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=1.4e-08 Score=98.94 Aligned_cols=119 Identities=13% Similarity=0.039 Sum_probs=91.2
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHH----HHcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~----~~~~ 317 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++ ++.+
T Consensus 53 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~ 132 (246)
T 3osu_A 53 GVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR 132 (246)
T ss_dssp TSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 557889999999999988887753 7899999999764322 33455678999999999999998 4456
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
..++|++||.+.+... |....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 133 ~g~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~vn~v~PG~v 187 (246)
T 3osu_A 133 SGAIINLSSVVGAVGN------------PGQANYVATK---AGVIGLTKSAARELASRGITVNAVAPGFI 187 (246)
T ss_dssp CEEEEEECCHHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CCEEEEEcchhhcCCC------------CCChHHHHHH---HHHHHHHHHHHHHhcccCeEEEEEEECCC
Confidence 6799999997765321 2247899999 6678888888763 5788888887653
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=98.86 E-value=1.1e-08 Score=100.69 Aligned_cols=119 Identities=16% Similarity=0.162 Sum_probs=85.5
Q ss_pred CCceeEEEeecCChhhHHHHhhc------CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHH----HHc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK------HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSH 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~------~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~----~~~ 316 (600)
+..+.++.+|+.+.+++.++++. .++|+|||+|+...... +.++....++.|+.++.++++++ ++.
T Consensus 62 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~ 141 (266)
T 1xq1_A 62 GFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS 141 (266)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 45688999999999988887754 37899999999754221 23455677899999999999988 455
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+.+++|++||...+... +....|+.+| ...|.+++.++.+. +++++.+||+.+
T Consensus 142 ~~~~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 197 (266)
T 1xq1_A 142 GCGNIIFMSSIAGVVSA------------SVGSIYSATK---GALNQLARNLACEWASDGIRANAVAPAVI 197 (266)
T ss_dssp SSCEEEEEC----------------------CCHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEECCSC
T ss_pred CCcEEEEEccchhccCC------------CCCchHHHHH---HHHHHHHHHHHHHHhHhCcEEEEEeeCCC
Confidence 67899999998776421 2237899999 66888888887664 899999998764
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.86 E-value=2.7e-08 Score=98.34 Aligned_cols=120 Identities=16% Similarity=0.048 Sum_probs=94.0
Q ss_pred hCCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc------cccccChHHHHHHHHHHHHHHHHHH----H
Q psy16545 250 TGKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV------GESMQEPLMYYKNNLIATINLLEVM----K 314 (600)
Q Consensus 250 ~~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~----~ 314 (600)
.+..+.++.+|+++.+++.++++.. ++|++||+|+.... ..+.++....+++|+.++.++++++ +
T Consensus 55 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 134 (271)
T 3tzq_B 55 VGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLI 134 (271)
T ss_dssp HCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3677899999999999998887753 68999999997632 1133455678999999999999998 5
Q ss_pred HcCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 315 SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 315 ~~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+.+..++|++||.+.+... +....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 135 ~~~~g~iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~l~~~la~e~~~~gi~vn~v~PG~v 192 (271)
T 3tzq_B 135 SAGGGAIVNISSATAHAAY------------DMSTAYACTK---AAIETLTRYVATQYGRHGVRCNAIAPGLV 192 (271)
T ss_dssp HTTCEEEEEECCGGGTSBC------------SSCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred hcCCCEEEEECCHHHcCCC------------CCChHHHHHH---HHHHHHHHHHHHHHhhcCEEEEEEEeCCC
Confidence 5566799999998876421 2237899999 6688888888876 6888888888763
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=98.86 E-value=3.3e-08 Score=96.85 Aligned_cols=121 Identities=13% Similarity=0.076 Sum_probs=91.9
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccC-cc----ccccChHHHHHHHHHHHHHHHHHHHH----c
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKA-VG----ESMQEPLMYYKNNLIATINLLEVMKS----H 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~-~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~----~ 316 (600)
+.++.++.+|+++.+++.++++. .++|+|||+|+... .. ...++....+++|+.++.++++++.. .
T Consensus 61 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 140 (260)
T 3awd_A 61 GHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQ 140 (260)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc
Confidence 45689999999999998888764 26899999999754 11 12234467789999999999998874 3
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+..++|++||...+.... ..+ ...|+.+| ...|.+++.++.+ ++++++.+||+.+
T Consensus 141 ~~~~iv~~sS~~~~~~~~---------~~~-~~~Y~~sK---~a~~~~~~~l~~e~~~~gi~v~~v~pg~v 198 (260)
T 3awd_A 141 KQGVIVAIGSMSGLIVNR---------PQQ-QAAYNASK---AGVHQYIRSLAAEWAPHGIRANAVAPTYI 198 (260)
T ss_dssp TCEEEEEECCGGGTSCCS---------SSC-CHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred CCCEEEEEecchhcccCC---------CCC-ccccHHHH---HHHHHHHHHHHHHhhhcCeEEEEEEeeee
Confidence 567999999987653211 112 27899999 7788899888876 6899999998764
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=98.85 E-value=8.3e-09 Score=100.38 Aligned_cols=118 Identities=11% Similarity=0.070 Sum_probs=81.0
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..+.++.+|+++++++.++++.. ++|+|||+|+..... .+.++....++.|+.++.++++++.. .+
T Consensus 54 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 133 (247)
T 2hq1_A 54 GINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK 133 (247)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 456889999999999988877643 689999999975422 23456678899999999888887764 46
Q ss_pred CCEEEEecCc-ccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 318 VYQLVFSSSC-TVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~-~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
.++||++||. +.|+. +....|+.+| ...|.+++.++.+. ++++..++|+.+
T Consensus 134 ~~~iv~~sS~~~~~~~-------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 188 (247)
T 2hq1_A 134 SGKIINITSIAGIIGN-------------AGQANYAASK---AGLIGFTKSIAKEFAAKGIYCNAVAPGII 188 (247)
T ss_dssp CEEEEEECC----------------------CHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CcEEEEEcChhhccCC-------------CCCcHhHHHH---HHHHHHHHHHHHHHHHcCcEEEEEEEEEE
Confidence 6899999997 45543 1237899999 66888888887654 677777777543
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.85 E-value=4.8e-08 Score=95.16 Aligned_cols=126 Identities=12% Similarity=0.072 Sum_probs=90.0
Q ss_pred HHHHhhhCCceeEEEeecCChhhHHHHhhcC-CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHH---
Q psy16545 244 RAIEQFTGKKVDFYSCDLVDKNRLGEIFAKH-DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS--- 315 (600)
Q Consensus 244 ~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~--- 315 (600)
..+.+.....+.+..+|+++.+.+.++++.. ++|++||+|+..... ...++....+++|+.++.++++++..
T Consensus 52 ~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 131 (249)
T 3f9i_A 52 KSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMI 131 (249)
T ss_dssp HHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444567899999999999999988765 589999999975422 24457788999999999999887753
Q ss_pred -cCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 316 -HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 316 -~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.+..++|++||.+.|... +....|+.|| ...+.+++.++.+ .++++..++|+.+
T Consensus 132 ~~~~g~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~PG~v 189 (249)
T 3f9i_A 132 QKRYGRIINISSIVGIAGN------------PGQANYCASK---AGLIGMTKSLSYEVATRGITVNAVAPGFI 189 (249)
T ss_dssp HHTCEEEEEECCCCC--CC------------SCSHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred hCCCcEEEEEccHHhccCC------------CCCchhHHHH---HHHHHHHHHHHHHHHHcCcEEEEEecCcc
Confidence 355699999998776431 2247899999 6678888888765 4677778877653
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=2.8e-08 Score=96.50 Aligned_cols=117 Identities=15% Similarity=0.051 Sum_probs=90.7
Q ss_pred ceeEEEeecCChhhHHHHhhcC-CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C-CCEEE
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G-VYQLV 322 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----~-~~r~v 322 (600)
+++++.+|+++.+++.++++.. ++|+|||+|+...... ..++....++.|+.++.++++++... + .+++|
T Consensus 53 ~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv 132 (244)
T 3d3w_A 53 GIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIV 132 (244)
T ss_dssp TCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4677899999999999988754 5899999999754321 23345678999999999999888753 4 57999
Q ss_pred EecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 323 FSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 323 ~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
++||...+... +....|+.|| ...|.+++.++.+ .++++..++|+.+
T Consensus 133 ~~sS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~~i~v~~v~Pg~v 182 (244)
T 3d3w_A 133 NVSSQCSQRAV------------TNHSVYCSTK---GALDMLTKVMALELGPHKIRVNAVNPTVV 182 (244)
T ss_dssp EECCGGGTSCC------------TTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred EeCchhhccCC------------CCCchHHHHH---HHHHHHHHHHHHHhcccCeEEEEEEeccc
Confidence 99998876421 2247899999 7788999888866 4788889998763
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=98.84 E-value=1e-09 Score=111.33 Aligned_cols=100 Identities=12% Similarity=-0.041 Sum_probs=64.1
Q ss_pred CCCEEEEcCcccC--c----ccCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKA--V----GESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~--~----~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|++|||||... . ....+++...+++|+.++.++++++... .-.++|++||...+.. . .
T Consensus 133 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~-----------~-~ 200 (319)
T 2ptg_A 133 QIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKV-----------I-P 200 (319)
T ss_dssp CEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------
T ss_pred CCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccc-----------c-C
Confidence 6999999999642 1 1123456679999999999999998764 1158999999764421 1 2
Q ss_pred CC-ChHHHHHHHHHHHHHHHHhhc---CCceEEEEecccccCCC
Q psy16545 138 IK-NVYGKTKHFIEEMLKDLSKAH---KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~-s~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~~ 177 (600)
.. +.|+.||.+.+.+++.++.+. .++++++++||.|..+.
T Consensus 201 ~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~ 244 (319)
T 2ptg_A 201 GYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRA 244 (319)
T ss_dssp ------------THHHHHHHHHHHHHHHCCEEEEEEECCCC---
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChh
Confidence 23 589999999999999998773 38999999999998774
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.84 E-value=1.3e-08 Score=100.26 Aligned_cols=121 Identities=16% Similarity=0.155 Sum_probs=91.1
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccc--cCc----cccccChHHHHHHHHHHHHHHHHHH----HH
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAV--KAV----GESMQEPLMYYKNNLIATINLLEVM----KS 315 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~--~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~----~~ 315 (600)
+.++.++.+|+++.+++.++++.. ++|++||+|+. ... ....++....+++|+.++.++++++ ++
T Consensus 56 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 135 (264)
T 3i4f_A 56 EERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRK 135 (264)
T ss_dssp GGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 457899999999999998887754 79999999993 211 1233455678999999999999988 45
Q ss_pred cCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 316 HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 316 ~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.+..++|++||...++... .+....|+.|| ...+.+++.++.+ .++++..++|+.+
T Consensus 136 ~~~g~iv~iss~~~~~~~~----------~~~~~~Y~asK---aa~~~~~~~la~e~~~~gi~v~~v~PG~v 194 (264)
T 3i4f_A 136 QNFGRIINYGFQGADSAPG----------WIYRSAFAAAK---VGLVSLTKTVAYEEAEYGITANMVCPGDI 194 (264)
T ss_dssp HTCEEEEEECCTTGGGCCC----------CTTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCC
T ss_pred cCCCeEEEEeechhcccCC----------CCCCchhHHHH---HHHHHHHHHHHHHhhhcCcEEEEEccCCc
Confidence 5667999999986653221 12237899999 6678888888766 5788888887653
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.83 E-value=8.4e-09 Score=101.41 Aligned_cols=118 Identities=14% Similarity=0.028 Sum_probs=89.9
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----Cc-cEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DI-DCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~-d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
.++.++.+|+++.+++.++++.. ++ |+|||+|+..... .+.++....++.|+.++.++++++... +
T Consensus 63 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 142 (264)
T 2pd6_A 63 GNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNG 142 (264)
T ss_dssp -CCEEEECCTTSHHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred cceEEEEecCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC
Confidence 35788999999999888877642 34 9999999975432 133456778999999999999988764 3
Q ss_pred -CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 -VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 -~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.++||++||...+... +....|+.+| ...|.+++.++.+ ++++++.+||+.+
T Consensus 143 ~~g~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 198 (264)
T 2pd6_A 143 CRGSIINISSIVGKVGN------------VGQTNYAASK---AGVIGLTQTAARELGRHGIRCNSVLPGFI 198 (264)
T ss_dssp CCEEEEEECCTHHHHCC------------TTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CCceEEEECChhhccCC------------CCChhhHHHH---HHHHHHHHHHHHHhhhcCeEEEEEeeecc
Confidence 4699999997654321 2247899999 6688888888766 6899999998763
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=98.82 E-value=2.3e-09 Score=100.94 Aligned_cols=113 Identities=8% Similarity=0.066 Sum_probs=86.5
Q ss_pred EEEeecCChhhHHHHhhcC-CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc---CCCEEEEecCc
Q psy16545 256 FYSCDLVDKNRLGEIFAKH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSC 327 (600)
Q Consensus 256 ~i~~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~---~~~r~v~~SS~ 327 (600)
++.+|+.+.+++.++++.. ++|+|||+|+...... +.++....++.|+.++.++++++.+. + +++|++||.
T Consensus 38 ~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~ 116 (202)
T 3d7l_A 38 DVTVDITNIDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGI 116 (202)
T ss_dssp SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCG
T ss_pred ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcch
Confidence 3678999999999888753 5899999999653222 22334567789999999999999876 4 699999998
Q ss_pred ccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH--hCCCCeeEeeccc
Q psy16545 328 TVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV--TGNKPVPYIFYNL 384 (600)
Q Consensus 328 ~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~--~~~~~~~~r~~~~ 384 (600)
..+... +....|+.+| ...|.+++.++.+ .+++++.+||+.+
T Consensus 117 ~~~~~~------------~~~~~Y~~sK---~~~~~~~~~~~~e~~~gi~v~~v~pg~v 160 (202)
T 3d7l_A 117 MMEDPI------------VQGASAAMAN---GAVTAFAKSAAIEMPRGIRINTVSPNVL 160 (202)
T ss_dssp GGTSCC------------TTCHHHHHHH---HHHHHHHHHHTTSCSTTCEEEEEEECCB
T ss_pred hhcCCC------------CccHHHHHHH---HHHHHHHHHHHHHccCCeEEEEEecCcc
Confidence 765321 2237899999 7789999888765 3889999998763
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.82 E-value=2.8e-08 Score=96.83 Aligned_cols=119 Identities=16% Similarity=0.077 Sum_probs=90.8
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc-------cccChHHHHHHHHHHHHHHHHHHH----
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE-------SMQEPLMYYKNNLIATINLLEVMK---- 314 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~-------~~~~~~~~~~~Nv~gt~~ll~~~~---- 314 (600)
+.++.++.+|+++.+++.++++.. ++|+|||+|+...... ..++....++.|+.++.++++++.
T Consensus 51 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 130 (250)
T 2cfc_A 51 ADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHML 130 (250)
T ss_dssp GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 346889999999999988887642 6899999999754321 234566788999999977766654
Q ss_pred HcCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 315 SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 315 ~~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+.+.+++|++||.+.+... +....|+.+| ...|.+++.++.+. +++++.+||+.+
T Consensus 131 ~~~~~~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v 188 (250)
T 2cfc_A 131 LQGAGVIVNIASVASLVAF------------PGRSAYTTSK---GAVLQLTKSVAVDYAGSGIRCNAVCPGMI 188 (250)
T ss_dssp HHTCEEEEEECCGGGTSCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred hCCCCEEEEECChhhccCC------------CCchhHHHHH---HHHHHHHHHHHHHhcccCeEEEEEEeCcC
Confidence 4467899999998776421 2237899999 67888888887664 899999998763
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=98.82 E-value=1.4e-08 Score=98.67 Aligned_cols=119 Identities=11% Similarity=-0.007 Sum_probs=90.5
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+..... .+.++....++.|+.++.++++++.+. +
T Consensus 50 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 129 (244)
T 1edo_A 50 GGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR 129 (244)
T ss_dssp TCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Confidence 557889999999999998887642 689999999975432 233455678999999999999988753 5
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.++||++||.+.+... +....|+.+| ...+.+.+.++.+ .+++++.+||+.+
T Consensus 130 ~~~iv~~sS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 184 (244)
T 1edo_A 130 KGRIINIASVVGLIGN------------IGQANYAAAK---AGVIGFSKTAAREGASRNINVNVVCPGFI 184 (244)
T ss_dssp CEEEEEECCTHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHHTTTEEEEEEEECSB
T ss_pred CCEEEEECChhhcCCC------------CCCccchhhH---HHHHHHHHHHHHHhhhcCCEEEEEeeCcc
Confidence 6799999998654321 1237899999 6677888777765 4788888888764
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.81 E-value=6.5e-08 Score=96.11 Aligned_cols=119 Identities=18% Similarity=0.104 Sum_probs=92.8
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+..... .+.++....+++|+.++.++++++. +.+
T Consensus 70 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 149 (281)
T 3s55_A 70 GRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN 149 (281)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 567899999999999988887753 799999999976432 2334556788999999999999864 345
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
..++|++||.+.+... +....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 150 ~g~iv~isS~~~~~~~------------~~~~~Y~asK---~a~~~~~~~la~e~~~~gi~vn~v~PG~v 204 (281)
T 3s55_A 150 YGRIVTVSSMLGHSAN------------FAQASYVSSK---WGVIGLTKCAAHDLVGYGITVNAVAPGNI 204 (281)
T ss_dssp CEEEEEECCGGGGSCC------------TTCHHHHHHH---HHHHHHHHHHHHHTGGGTEEEEEEEECSB
T ss_pred CCEEEEECChhhcCCC------------CCCchhHHHH---HHHHHHHHHHHHHHhhcCcEEEEEecCcc
Confidence 6799999998776321 2237899999 6688888888875 5788899998764
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=3.1e-08 Score=96.29 Aligned_cols=119 Identities=13% Similarity=0.067 Sum_probs=88.0
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHH----HHcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVM----KSHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~----~~~~ 317 (600)
+..+.++.+|+.+.+++.++++.. ++|+|||+|+..... .+..+....++.|+.++.++++++ ++.+
T Consensus 56 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 135 (248)
T 2pnf_A 56 GVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR 135 (248)
T ss_dssp CCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Confidence 567899999999999998887642 689999999975422 233455678999999997666654 4456
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.++||++||...+... +....|+.+| ...+.+++.++.+ .+++++.++|+.+
T Consensus 136 ~~~iv~~sS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~~i~v~~v~Pg~v 190 (248)
T 2pnf_A 136 WGRIVNISSVVGFTGN------------VGQVNYSTTK---AGLIGFTKSLAKELAPRNVLVNAVAPGFI 190 (248)
T ss_dssp CEEEEEECCHHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CcEEEEEccHHhcCCC------------CCCchHHHHH---HHHHHHHHHHHHHhcccCeEEEEEEecee
Confidence 7899999997644221 1236899999 6678888887765 3788888887653
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.2e-08 Score=99.03 Aligned_cols=119 Identities=11% Similarity=0.050 Sum_probs=86.2
Q ss_pred CCceeE-EEeecCChhhHHHHhhc-----CCccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHH----HHHHc
Q psy16545 251 GKKVDF-YSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLE----VMKSH 316 (600)
Q Consensus 251 ~~~v~~-i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~----~~~~~ 316 (600)
+..+.+ +.+|+++.+++.++++. .++|+|||+|+..... .+.++....+++|+.++.++++ .+++.
T Consensus 50 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~ 129 (245)
T 2ph3_A 50 GSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA 129 (245)
T ss_dssp TCSCEEEEECCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc
Confidence 345566 89999999988887653 2689999999975422 2334556788999999555554 45556
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+.++||++||...+... +....|+.+| ...+.+.+.++.+. +++++.+||+.+
T Consensus 130 ~~~~iv~~sS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 185 (245)
T 2ph3_A 130 RFGRIVNITSVVGILGN------------PGQANYVASK---AGLIGFTRAVAKEYAQRGITVNAVAPGFI 185 (245)
T ss_dssp TCEEEEEECCTHHHHCC------------SSBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CCCEEEEEeChhhccCC------------CCCcchHHHH---HHHHHHHHHHHHHHHHcCeEEEEEEEEee
Confidence 77899999997654321 1237899999 66788888877654 788899998764
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=98.79 E-value=3.5e-08 Score=96.67 Aligned_cols=119 Identities=16% Similarity=0.104 Sum_probs=90.7
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc---ccccChHHHHHHHHHHHHHHHHHHH----HcCC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG---ESMQEPLMYYKNNLIATINLLEVMK----SHGV 318 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~~~----~~~~ 318 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+..... .+.++....+++|+.++.++++++. +.+.
T Consensus 60 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 139 (256)
T 3gaf_A 60 GGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGG 139 (256)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 567899999999999988877653 789999999976432 2334566789999999999999875 3455
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
.++|++||.+.+... +....|+.|| ...+.+.+.++.+. ++++..++|+.+
T Consensus 140 g~iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~~~~~la~e~~~~gi~vn~v~PG~v 193 (256)
T 3gaf_A 140 GAILNISSMAGENTN------------VRMASYGSSK---AAVNHLTRNIAFDVGPMGIRVNAIAPGAI 193 (256)
T ss_dssp EEEEEECCGGGTCCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred cEEEEEcCHHHcCCC------------CCchHHHHHH---HHHHHHHHHHHHHHhhhCcEEEEEEEccc
Confidence 799999998766321 2247899999 66788888888664 677777776553
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.79 E-value=3.9e-08 Score=97.76 Aligned_cols=119 Identities=13% Similarity=0.106 Sum_probs=91.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++. +.+
T Consensus 75 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 154 (281)
T 3v2h_A 75 SGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG 154 (281)
T ss_dssp SSCEEEECCCTTCHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 567899999999999988877653 6899999999764332 334556788999999999999874 445
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
..++|++||.+.+... +....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 155 ~g~iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~l~~~la~e~~~~gI~vn~v~PG~v 209 (281)
T 3v2h_A 155 WGRIINIASAHGLVAS------------PFKSAYVAAK---HGIMGLTKTVALEVAESGVTVNSICPGYV 209 (281)
T ss_dssp CEEEEEECCGGGTSCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CCEEEEECCcccccCC------------CCchHHHHHH---HHHHHHHHHHHHHhhhcCcEEEEEECCCC
Confidence 6799999998766321 2237899999 6678888888866 3788888887653
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.78 E-value=4.3e-08 Score=96.35 Aligned_cols=119 Identities=18% Similarity=0.054 Sum_probs=91.1
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----CC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----GV 318 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~ 318 (600)
..+.++.+|+++++++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++..+ +.
T Consensus 60 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~ 139 (262)
T 3pk0_A 60 GKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGS 139 (262)
T ss_dssp SCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSS
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 56899999999999988877643 7999999999754322 23445667899999999999888764 67
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.++|++||...+-. + .+....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 140 g~iv~isS~~~~~~----------~-~~~~~~Y~asK---~a~~~l~~~la~e~~~~gi~vn~v~PG~v 194 (262)
T 3pk0_A 140 GRVVLTSSITGPIT----------G-YPGWSHYGATK---AAQLGFMRTAAIELAPHKITVNAIMPGNI 194 (262)
T ss_dssp CEEEEECCSBTTTB----------C-CTTCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECSB
T ss_pred cEEEEEechhhccC----------C-CCCChhhHHHH---HHHHHHHHHHHHHHHhhCcEEEEEEeCcC
Confidence 89999999764210 0 12247899999 6688888888876 6899999998764
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.78 E-value=2.1e-08 Score=97.16 Aligned_cols=116 Identities=16% Similarity=0.096 Sum_probs=88.9
Q ss_pred eeEEEeecCChhhHHHHhhcC----CccEEEEcccccCccccc--------cChHHHHHHHHHHHHHHHHHHHHcC----
Q psy16545 254 VDFYSCDLVDKNRLGEIFAKH----DIDCVIHFAAVKAVGESM--------QEPLMYYKNNLIATINLLEVMKSHG---- 317 (600)
Q Consensus 254 v~~i~~Dl~~~~~l~~~l~~~----~~d~VihlAa~~~~~~~~--------~~~~~~~~~Nv~gt~~ll~~~~~~~---- 317 (600)
+.++.+|+++.+++.++++.. ++|++||+|+........ ++....++.|+.++.++++++...-
T Consensus 41 ~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 120 (242)
T 1uay_A 41 LIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENP 120 (242)
T ss_dssp SEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCC
T ss_pred eEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 478899999999998887643 789999999975432211 1567789999999999999988641
Q ss_pred ------CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 ------VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ------~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
..+||++||...|... +....|+.+| ...+.+++.++.+ .+++++.+||+.+
T Consensus 121 ~~~~~~~~~iv~~sS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v 181 (242)
T 1uay_A 121 PDAEGQRGVIVNTASVAAFEGQ------------IGQAAYAASK---GGVVALTLPAARELAGWGIRVVTVAPGLF 181 (242)
T ss_dssp CCTTSCSEEEEEECCTHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSC
T ss_pred CCCCCCCeEEEEeCChhhccCC------------CCCchhhHHH---HHHHHHHHHHHHHHhhcCcEEEEEEeccC
Confidence 1299999999887632 1237899999 6678888877765 4899999998764
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=4.2e-08 Score=96.32 Aligned_cols=117 Identities=11% Similarity=0.068 Sum_probs=90.2
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc--------cccccChHHHHHHHHHHHHHHHHHHHHc--C
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV--------GESMQEPLMYYKNNLIATINLLEVMKSH--G 317 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~--~ 317 (600)
.+.++.+|+++++++.++++.. ++|++||+|+.... ..+.++....+++|+.++.++++++... .
T Consensus 59 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 138 (261)
T 2wyu_A 59 GALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE 138 (261)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE
T ss_pred CcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc
Confidence 3788999999999988877643 68999999997542 1233456778999999999999999875 1
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
-.++|++||.+.+... +....|+.|| ...+.+.+.++.+. ++++..++|+.+
T Consensus 139 ~g~iv~isS~~~~~~~------------~~~~~Y~asK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 193 (261)
T 2wyu_A 139 GGGIVTLTYYASEKVV------------PKYNVMAIAK---AALEASVRYLAYELGPKGVRVNAISAGPV 193 (261)
T ss_dssp EEEEEEEECGGGTSBC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECCC
T ss_pred CCEEEEEecccccCCC------------CCchHHHHHH---HHHHHHHHHHHHHHhhhCcEEEEEeeCCC
Confidence 2599999997765321 2236899999 66888888887664 899999998764
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=2.2e-08 Score=98.26 Aligned_cols=119 Identities=17% Similarity=0.105 Sum_probs=90.0
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc-----cccccChHHHHHHHHHHHHHHHHHHH----Hc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMK----SH 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~----~~ 316 (600)
+..+.++.+|+.+.+++.++++.. ++|++||+|+.... ..+.++....+++|+.++.++++++. +.
T Consensus 62 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~ 141 (260)
T 2zat_A 62 GLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR 141 (260)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 456888999999999888877642 68999999996431 11233456788999999998888875 45
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+.+++|++||.+.|... +....|+.+| ...+.+.+.++.+. ++++..++|+.+
T Consensus 142 ~~g~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 197 (260)
T 2zat_A 142 GGGSVLIVSSVGAYHPF------------PNLGPYNVSK---TALLGLTKNLAVELAPRNIRVNCLAPGLI 197 (260)
T ss_dssp TCEEEEEECCGGGTSCC------------TTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CCCEEEEEechhhcCCC------------CCchhHHHHH---HHHHHHHHHHHHHhcccCeEEEEEEECcc
Confidence 66899999999887431 2247899999 66788888887654 788888887653
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.78 E-value=3.3e-08 Score=96.91 Aligned_cols=119 Identities=16% Similarity=0.130 Sum_probs=90.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc--------ccccChHHHHHHHHHHHHHHHHHHHHc-
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG--------ESMQEPLMYYKNNLIATINLLEVMKSH- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~--------~~~~~~~~~~~~Nv~gt~~ll~~~~~~- 316 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+..... ...++....+++|+.++.++++++...
T Consensus 52 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 131 (257)
T 3tpc_A 52 GAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVM 131 (257)
T ss_dssp ---CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 456889999999999988887653 799999999976432 223456678899999999999998864
Q ss_pred ---------CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 ---------GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 ---------~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+..++|++||.+.+... +....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 132 ~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~~~~~la~e~~~~gi~vn~v~PG~v 196 (257)
T 3tpc_A 132 SQGEPDADGERGVIVNTASIAAFDGQ------------IGQAAYAASK---GGVAALTLPAARELARFGIRVVTIAPGIF 196 (257)
T ss_dssp TTSCCCTTSCCEEEEEECCTHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred HhccccCCCCCeEEEEEechhhccCC------------CCCcchHHHH---HHHHHHHHHHHHHHHHcCeEEEEEEeCCC
Confidence 34589999998776431 1237899999 6678888888876 6788888888764
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.78 E-value=6.2e-08 Score=95.22 Aligned_cols=117 Identities=11% Similarity=0.009 Sum_probs=89.7
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C-C
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G-V 318 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----~-~ 318 (600)
++.++.+|+++.+++.++++.. ++|++||+|+...... +.++....++.|+.++.++++++... + .
T Consensus 59 ~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~ 138 (263)
T 3ak4_A 59 GGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTK 138 (263)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC
T ss_pred CCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence 6788999999999988877643 6899999999754321 23355678899999999998887643 4 5
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.++|++||...+... |....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 139 g~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 192 (263)
T 3ak4_A 139 GVIVNTASLAAKVGA------------PLLAHYSASK---FAVFGWTQALAREMAPKNIRVNCVCPGFV 192 (263)
T ss_dssp CEEEEECCGGGTSCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECSB
T ss_pred eEEEEecccccccCC------------CCchhHHHHH---HHHHHHHHHHHHHHhHcCeEEEEEecccc
Confidence 799999998765321 2247899999 6678888888765 4899999998764
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.77 E-value=2.8e-08 Score=97.09 Aligned_cols=115 Identities=16% Similarity=0.108 Sum_probs=78.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc-------cccccChHHHHHHHHHHHHHHHHHH----H
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV-------GESMQEPLMYYKNNLIATINLLEVM----K 314 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~-------~~~~~~~~~~~~~Nv~gt~~ll~~~----~ 314 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+.... ....++....+++|+.++.++.+++ +
T Consensus 57 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 136 (253)
T 3qiv_A 57 GGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMT 136 (253)
T ss_dssp TCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 457889999999999988887753 79999999997321 1133455678999999966666655 4
Q ss_pred HcCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 315 SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 315 ~~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
+.+..++|++||.+.|. + ...|+.|| ...+.+++.++.+. ++++..++|+.
T Consensus 137 ~~~~g~iv~isS~~~~~--------------~-~~~Y~asK---~a~~~~~~~la~e~~~~gi~v~~v~PG~ 190 (253)
T 3qiv_A 137 KRGGGAIVNQSSTAAWL--------------Y-SNYYGLAK---VGINGLTQQLSRELGGRNIRINAIAPGP 190 (253)
T ss_dssp HHTCEEEEEECC--------------------------CCH---HHHHHHHHHHHHHTTTTTEEEEEEEC--
T ss_pred hcCCCEEEEECCccccC--------------C-CchhHHHH---HHHHHHHHHHHHHHhhcCeEEEEEEecC
Confidence 44567999999988772 1 26799999 67889999888875 56677777654
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=6.1e-08 Score=94.59 Aligned_cols=121 Identities=13% Similarity=0.025 Sum_probs=89.8
Q ss_pred CCce-eEEEeecCChhhHHHHhhc----CCccEEEEcccccCcccc----ccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKV-DFYSCDLVDKNRLGEIFAK----HDIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v-~~i~~Dl~~~~~l~~~l~~----~~~d~VihlAa~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+..+ .++.+|+++.+++.++++. .++|+|||+|+....... .++....+++|+.++.++++++. +.+
T Consensus 56 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 135 (254)
T 2wsb_A 56 GAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG 135 (254)
T ss_dssp GGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred cccceeEEEEecCCHHHHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 4456 8899999999998887754 378999999997543322 23345678899999777777654 456
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
.++||++||...+..... .+ ...|+.+| ...|.+++.++.+. +++++.+||+.+
T Consensus 136 ~~~iv~isS~~~~~~~~~---------~~-~~~Y~~sK---~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v 192 (254)
T 2wsb_A 136 AGAIVNLGSMSGTIVNRP---------QF-ASSYMASK---GAVHQLTRALAAEWAGRGVRVNALAPGYV 192 (254)
T ss_dssp CEEEEEECCGGGTSCCSS---------SC-BHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred CcEEEEEecchhccCCCC---------Cc-chHHHHHH---HHHHHHHHHHHHHHhhcCeEEEEEEeccc
Confidence 789999999887643211 12 27899999 67888888887664 899999998764
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=8.1e-08 Score=94.16 Aligned_cols=119 Identities=11% Similarity=-0.047 Sum_probs=89.9
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
+..+.++.+|+++.+++.++++.. ++|+|||+|+..... .+.++....+++|+.++.++++++... +
T Consensus 56 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 135 (261)
T 1gee_A 56 GGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEND 135 (261)
T ss_dssp TCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC
Confidence 456889999999999888877643 689999999975432 233455678899999999888876643 4
Q ss_pred -CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 318 -VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 318 -~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
..++|++||...+.. .+....|+.+| ...+.+++.++.+. +++++.+||+.+
T Consensus 136 ~~~~iv~isS~~~~~~------------~~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 191 (261)
T 1gee_A 136 IKGTVINMSSVHEKIP------------WPLFVHYAASK---GGMKLMTETLALEYAPKGIRVNNIGPGAI 191 (261)
T ss_dssp CCCEEEEECCGGGTSC------------CTTCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECSB
T ss_pred CCCEEEEeCCHHhcCC------------CCCccHHHHHH---HHHHHHHHHHHHHhcccCeEEEEEeeCCc
Confidence 579999999776531 12247899999 66778887777653 899999998764
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=5.5e-08 Score=95.45 Aligned_cols=117 Identities=12% Similarity=0.056 Sum_probs=88.7
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHH----HHcCCC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVM----KSHGVY 319 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~----~~~~~~ 319 (600)
.+.++.+|+++++++.++++.. ++|++||+|+..... .+.++....++.|+.++.++++++ ++.+.+
T Consensus 54 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g 133 (260)
T 1nff_A 54 AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRG 133 (260)
T ss_dssp GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence 5788999999999988887642 689999999975432 123455678899999997665554 445678
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
++|++||.+.|... +....|+.|| ...+.+.+.++.+ ++++++.+||+.+
T Consensus 134 ~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 186 (260)
T 1nff_A 134 SIINISSIEGLAGT------------VACHGYTATK---FAVRGLTKSTALELGPSGIRVNSIHPGLV 186 (260)
T ss_dssp EEEEECCGGGTSCC------------TTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred EEEEEeehhhcCCC------------CCchhHHHHH---HHHHHHHHHHHHHhCccCcEEEEEEeCCC
Confidence 99999998876421 2236899999 6678888888765 5899999998764
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.74 E-value=5.8e-08 Score=95.96 Aligned_cols=120 Identities=12% Similarity=0.030 Sum_probs=91.7
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc-----cccChHHHHHHHHHHHHHHHHHHHHc----
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSH---- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~~~~~---- 316 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++...
T Consensus 75 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 154 (272)
T 4e3z_A 75 GGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRL 154 (272)
T ss_dssp TCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGG
T ss_pred CCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHh
Confidence 567899999999999998887753 7899999999764322 33456778999999999999988754
Q ss_pred ---CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 317 ---GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 317 ---~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+..++|++||.+.+.... +....|+.|| ...+.+++.++.+. ++++..++|+.+
T Consensus 155 ~~~~~g~iv~isS~~~~~~~~-----------~~~~~Y~asK---aa~~~~~~~la~e~~~~gi~v~~v~PG~v 214 (272)
T 4e3z_A 155 YSGQGGAIVNVSSMAAILGSA-----------TQYVDYAASK---AAIDTFTIGLAREVAAEGIRVNAVRPGII 214 (272)
T ss_dssp GTCCCEEEEEECCTHHHHCCT-----------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred ccCCCCEEEEEcchHhccCCC-----------CCcchhHHHH---HHHHHHHHHHHHHHHHcCcEEEEEecCCC
Confidence 245899999987653211 1125799999 66888888887764 788888888764
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.73 E-value=6.8e-08 Score=96.53 Aligned_cols=117 Identities=16% Similarity=0.087 Sum_probs=90.6
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGV 318 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~~ 318 (600)
..+.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++. +.+.
T Consensus 91 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 170 (293)
T 3rih_A 91 GNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGR 170 (293)
T ss_dssp SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSS
T ss_pred CcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 46889999999999888877653 6899999999764322 334556788999999999999884 4566
Q ss_pred CEEEEecCcccc--cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVY--GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vY--g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.++|++||.+.+ +. +....|+.|| ...+.+.+.++.+ +|+++..++|+.+
T Consensus 171 g~iV~isS~~~~~~~~-------------~~~~~Y~asK---aa~~~l~~~la~e~~~~gI~vn~v~PG~v 225 (293)
T 3rih_A 171 GRVILTSSITGPVTGY-------------PGWSHYGASK---AAQLGFMRTAAIELAPRGVTVNAILPGNI 225 (293)
T ss_dssp CEEEEECCSBTTTBBC-------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECSB
T ss_pred CEEEEEeChhhccCCC-------------CCCHHHHHHH---HHHHHHHHHHHHHHhhhCeEEEEEecCCC
Confidence 899999997643 21 2237899999 6678888888766 5888889988764
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.73 E-value=1.1e-07 Score=92.55 Aligned_cols=119 Identities=13% Similarity=0.033 Sum_probs=90.3
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++.. .+
T Consensus 53 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 132 (247)
T 3lyl_A 53 GFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR 132 (247)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 557899999999999988877653 5899999999764322 3345567899999999999988764 34
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
..++|++||...+... +....|+.|| ...+.+++.++.+ .++++..++|+.+
T Consensus 133 ~g~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~PG~v 187 (247)
T 3lyl_A 133 WGRIISIGSVVGSAGN------------PGQTNYCAAK---AGVIGFSKSLAYEVASRNITVNVVAPGFI 187 (247)
T ss_dssp CEEEEEECCTHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CeEEEEEcchhhccCC------------CCcHHHHHHH---HHHHHHHHHHHHHHHHcCeEEEEEeeCcE
Confidence 5699999998766421 2247899999 6678888888765 4777888877653
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=98.73 E-value=7.7e-08 Score=94.12 Aligned_cols=119 Identities=15% Similarity=0.086 Sum_probs=89.1
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHH----HHcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~----~~~~ 317 (600)
+.++.++.+|+++.+++.++++.. ++|++||+|+...... ..++....+++|+.++.++.+++ ++.+
T Consensus 50 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~ 129 (255)
T 2q2v_A 50 GVKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN 129 (255)
T ss_dssp SCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 456788999999999988887643 6899999999754321 23455678899999776666655 5566
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.+++|++||.+.+... +....|+.+| ...+.+.+.++.+ +++++..++|+.+
T Consensus 130 ~g~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 184 (255)
T 2q2v_A 130 WGRIINIASVHGLVGS------------TGKAAYVAAK---HGVVGLTKVVGLETATSNVTCNAICPGWV 184 (255)
T ss_dssp CEEEEEECCGGGTSCC------------TTBHHHHHHH---HHHHHHHHHHHHHTTTSSEEEEEEEESSB
T ss_pred CcEEEEEcCchhccCC------------CCchhHHHHH---HHHHHHHHHHHHHhcccCcEEEEEeeCCC
Confidence 7899999998876431 2247899999 6688888888876 4688888888764
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.72 E-value=4.3e-08 Score=97.61 Aligned_cols=119 Identities=13% Similarity=0.112 Sum_probs=89.7
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+..+.++.+|+++.+++.++++. .++|+|||+|+..... .+.++....+++|+.++.++++++. +.+
T Consensus 92 ~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 171 (285)
T 2c07_A 92 GYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR 171 (285)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT
T ss_pred CCceeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC
Confidence 45688999999999999888754 2689999999975432 2334556789999999888877775 346
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.++||++||.+.+... +....|+.+| ...+.+++.++.+ .+++++.++|+.+
T Consensus 172 ~~~iv~isS~~~~~~~------------~~~~~Y~asK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 226 (285)
T 2c07_A 172 YGRIINISSIVGLTGN------------VGQANYSSSK---AGVIGFTKSLAKELASRNITVNAIAPGFI 226 (285)
T ss_dssp CEEEEEECCTHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CCEEEEECChhhccCC------------CCCchHHHHH---HHHHHHHHHHHHHHHHhCcEEEEEEeCcE
Confidence 6899999998765321 1237899999 6678888887765 3788888888754
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=98.72 E-value=9.2e-08 Score=92.36 Aligned_cols=106 Identities=14% Similarity=0.090 Sum_probs=69.6
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
..+++++.+|+.+++.+.++++ ++|+|||+|+.... ...+.++++++++.+++|||++||..+|
T Consensus 66 ~~~~~~~~~Dl~d~~~~~~~~~--~~D~vv~~a~~~~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~ 129 (236)
T 3qvo_A 66 PTNSQIIMGDVLNHAALKQAMQ--GQDIVYANLTGEDL--------------DIQANSVIAAMKACDVKRLIFVLSLGIY 129 (236)
T ss_dssp CTTEEEEECCTTCHHHHHHHHT--TCSEEEEECCSTTH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC-
T ss_pred cCCcEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCch--------------hHHHHHHHHHHHHcCCCEEEEEecceec
Confidence 3578999999999999999998 78999999875211 1346789999999999999999999999
Q ss_pred cCCCCCC--CCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeeccc
Q psy16545 331 GEPQFLP--ITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL 384 (600)
Q Consensus 331 g~~~~~~--~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~ 384 (600)
+...... ..|..+..+. ..|. .+|..+ +..+++++++||+.+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~l----~~~gi~~~~vrPg~i 173 (236)
T 3qvo_A 130 DEVPGKFVEWNNAVIGEPL-KPFR-------RAADAI----EASGLEYTILRPAWL 173 (236)
T ss_dssp ---------------CGGG-HHHH-------HHHHHH----HTSCSEEEEEEECEE
T ss_pred CCCCcccccchhhcccchH-HHHH-------HHHHHH----HHCCCCEEEEeCCcc
Confidence 8654322 2233222111 2232 233333 357999999998763
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=1.3e-07 Score=93.20 Aligned_cols=119 Identities=12% Similarity=0.035 Sum_probs=90.8
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++.. .+
T Consensus 77 ~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 156 (269)
T 4dmm_A 77 GGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR 156 (269)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 567889999999999988887753 7899999999764322 3345567899999999999998743 45
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
..++|++||.+.+... +....|+.|| ...+.+.+.++.+ +|+++..++|+.+
T Consensus 157 ~g~iv~isS~~~~~~~------------~~~~~Y~asK---~a~~~l~~~la~e~~~~gi~vn~v~PG~v 211 (269)
T 4dmm_A 157 SGRIINIASVVGEMGN------------PGQANYSAAK---AGVIGLTKTVAKELASRGITVNAVAPGFI 211 (269)
T ss_dssp CCEEEEECCHHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECCB
T ss_pred CcEEEEECchhhcCCC------------CCchhHHHHH---HHHHHHHHHHHHHHhhhCcEEEEEEECCC
Confidence 6799999997765321 2237899999 6678888887765 5788888887654
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=2.1e-08 Score=98.13 Aligned_cols=120 Identities=12% Similarity=0.079 Sum_probs=89.1
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccc-cCcc----ccccChHHHHHHHHHHHHHHHHHHHHc----
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAV-KAVG----ESMQEPLMYYKNNLIATINLLEVMKSH---- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~-~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~---- 316 (600)
+.++.++.+|+++.+++.++++.. ++|+|||+|+. .... ...++....++.|+.++.++++++...
T Consensus 56 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (258)
T 3afn_B 56 GGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAA 135 (258)
T ss_dssp TCEEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc
Confidence 457899999999999988887643 68999999996 3211 122345667899999999998876532
Q ss_pred C--C---CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 317 G--V---YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 317 ~--~---~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+ . .++|++||...+... .+....|+.|| ...|.+++.++... +++++.+||+.+
T Consensus 136 ~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~~Y~~sK---~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v 197 (258)
T 3afn_B 136 AKASGQTSAVISTGSIAGHTGG-----------GPGAGLYGAAK---AFLHNVHKNWVDFHTKDGVRFNIVSPGTV 197 (258)
T ss_dssp HHHHTSCEEEEEECCTHHHHCC-----------CTTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred ccCCCCCcEEEEecchhhccCC-----------CCCchHHHHHH---HHHHHHHHHHHHhhcccCeEEEEEeCCCc
Confidence 2 2 699999998766410 12247899999 67888888887654 889999998764
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.71 E-value=1.1e-07 Score=93.59 Aligned_cols=119 Identities=12% Similarity=0.076 Sum_probs=91.2
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc-----
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----- 316 (600)
+.++.++.+|+++.+++.++++.. ++|++||+|+...... ..++....+++|+.++.++++++...
T Consensus 72 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 151 (266)
T 3o38_A 72 LGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVD 151 (266)
T ss_dssp SSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS
T ss_pred CCceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 457899999999999998887753 6899999999754322 23455678899999999999988764
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+..++|++||...+... +....|+.+| ...+.+++.++.+ +++++..++|+.+
T Consensus 152 ~~~~iv~~sS~~~~~~~------------~~~~~Y~~sK---aa~~~~~~~la~e~~~~gi~v~~v~PG~v 207 (266)
T 3o38_A 152 HGGVIVNNASVLGWRAQ------------HSQSHYAAAK---AGVMALTRCSAIEAVEFGVRINAVSPSIA 207 (266)
T ss_dssp CCEEEEEECCGGGTCCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCC
T ss_pred CCeEEEEeCCHHHcCCC------------CCCchHHHHH---HHHHHHHHHHHHHHHHcCcEEEEEeCCcc
Confidence 44689999997765321 2247899999 6678888888766 5788888887653
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=8.8e-08 Score=95.68 Aligned_cols=119 Identities=13% Similarity=0.158 Sum_probs=93.0
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc-----cccChHHHHHHHHHHHHHHHHHHHHc--CC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSH--GV 318 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~ 318 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++... ..
T Consensus 96 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 175 (291)
T 3ijr_A 96 GVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQG 175 (291)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTT
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC
Confidence 567899999999999988877653 6899999998754322 33456788999999999999999875 23
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
.++|++||...|... +....|+.|| ...+.+.+.++.+. ++++..++|+.+
T Consensus 176 g~iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~l~~~la~e~~~~gi~vn~v~PG~v 229 (291)
T 3ijr_A 176 DVIINTASIVAYEGN------------ETLIDYSATK---GAIVAFTRSLSQSLVQKGIRVNGVAPGPI 229 (291)
T ss_dssp CEEEEECCTHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECSB
T ss_pred CEEEEEechHhcCCC------------CCChhHHHHH---HHHHHHHHHHHHHHhhcCEEEEEEeeCCC
Confidence 599999998877432 1237899999 66888888888764 788888887654
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.70 E-value=9.1e-08 Score=93.97 Aligned_cols=127 Identities=17% Similarity=0.178 Sum_probs=92.7
Q ss_pred hCCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----
Q psy16545 250 TGKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH---- 316 (600)
Q Consensus 250 ~~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~---- 316 (600)
.+..+.++.+|+++.+++.++++. .++|++||+|+...... ..++....++.|+.++.++++++...
T Consensus 62 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 141 (265)
T 1h5q_A 62 FGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK 141 (265)
T ss_dssp HTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred cCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhc
Confidence 356789999999999988887764 24899999999754321 23455677899999999999988653
Q ss_pred C-CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 G-VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 ~-~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+ .++||++||.+.+..... +..+..+ ...|+.+| ...|.+++.++.+ ++++++.+||+.+
T Consensus 142 ~~~~~iv~~sS~~~~~~~~~----~~~~~~~-~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 205 (265)
T 1h5q_A 142 QQKGSIVVTSSMSSQIINQS----SLNGSLT-QVFYNSSK---AACSNLVKGLAAEWASAGIRVNALSPGYV 205 (265)
T ss_dssp TCCEEEEEECCGGGTSCCEE----ETTEECS-CHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CCCceEEEeCCchhhccccc----ccccccc-ccccHHHH---HHHHHHHHHHHHHHHhcCcEEEEEecCcc
Confidence 3 379999999876643211 0111122 37899999 6788888888765 4889999998764
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.70 E-value=5.7e-08 Score=95.35 Aligned_cols=124 Identities=10% Similarity=0.043 Sum_probs=90.1
Q ss_pred HHHhhhCCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc-----cccChHHHHHHHHHHHHHHHHHHH
Q psy16545 245 AIEQFTGKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMK 314 (600)
Q Consensus 245 ~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~~~ 314 (600)
.+.+..+..+.++.+|+++.+++.++++.. ++|++||+|+...... ..++....+++|+.++.++++++.
T Consensus 48 ~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 127 (261)
T 3n74_A 48 RVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLI 127 (261)
T ss_dssp HHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 333344667899999999999988887753 7899999999754222 234556778999999998888876
Q ss_pred Hc----C----CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 315 SH----G----VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 315 ~~----~----~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.. + ..++|++||...+.. .+....|+.+| ...+.+.+.++.+ +++++..++|+.
T Consensus 128 ~~~~~~~~~~~~~~iv~isS~~~~~~------------~~~~~~Y~asK---aa~~~~~~~la~e~~~~gi~v~~v~PG~ 192 (261)
T 3n74_A 128 PHFKENGAKGQECVILNVASTGAGRP------------RPNLAWYNATK---GWVVSVTKALAIELAPAKIRVVALNPVA 192 (261)
T ss_dssp HHHHHHHHTTCCEEEEEECCTTTTSC------------CTTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEEC-
T ss_pred HHHHhcCCCCCCeEEEEeCchhhcCC------------CCCccHHHHHH---HHHHHHHHHHHHHhhhcCcEEEEEecCc
Confidence 43 1 347999999876532 12236799999 6678888888766 477777777654
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=2e-07 Score=92.26 Aligned_cols=119 Identities=11% Similarity=-0.017 Sum_probs=90.0
Q ss_pred CCceeEEEeecCCh----hhHHHHhhcC-----CccEEEEcccccCccc----cc-----------cChHHHHHHHHHHH
Q psy16545 251 GKKVDFYSCDLVDK----NRLGEIFAKH-----DIDCVIHFAAVKAVGE----SM-----------QEPLMYYKNNLIAT 306 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~----~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~-----------~~~~~~~~~Nv~gt 306 (600)
+..+.++.+|+++. +++.++++.. ++|++||+|+...... .. ++....+++|+.++
T Consensus 61 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~ 140 (276)
T 1mxh_A 61 AGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAP 140 (276)
T ss_dssp TTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHH
T ss_pred CCceEEEeccCCCccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHH
Confidence 55789999999999 8888777642 6899999999754321 11 34456899999999
Q ss_pred HHHHHHHHHc---CC------CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CC
Q psy16545 307 INLLEVMKSH---GV------YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GN 374 (600)
Q Consensus 307 ~~ll~~~~~~---~~------~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~ 374 (600)
.++++++... +. .++|++||.+.+... +....|+.|| ...+.+.+.++.+. ++
T Consensus 141 ~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asK---~a~~~l~~~la~e~~~~gi 205 (276)
T 1mxh_A 141 LFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPL------------PGFCVYTMAK---HALGGLTRAAALELAPRHI 205 (276)
T ss_dssp HHHHHHHHHTC-------CCCEEEEEECCGGGGSCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTE
T ss_pred HHHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCCC------------CCCeehHHHH---HHHHHHHHHHHHHHhhcCe
Confidence 9999999874 33 699999998876421 2236899999 66788888887654 88
Q ss_pred CCeeEeeccc
Q psy16545 375 KPVPYIFYNL 384 (600)
Q Consensus 375 ~~~~~r~~~~ 384 (600)
++..++|+.+
T Consensus 206 ~v~~v~PG~v 215 (276)
T 1mxh_A 206 RVNAVAPGLS 215 (276)
T ss_dssp EEEEEEESSB
T ss_pred EEEEEecCcc
Confidence 8999998764
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.70 E-value=6.2e-08 Score=96.48 Aligned_cols=130 Identities=13% Similarity=0.068 Sum_probs=96.6
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc--ccccChHHHHHHHHHHHHHHHHHHHHc--CCCEE
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG--ESMQEPLMYYKNNLIATINLLEVMKSH--GVYQL 321 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~--~~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~r~ 321 (600)
+.++.++.+|+++.+++.++++.. ++|++||+|+..... .+.++....+++|+.++.++++++... +-.++
T Consensus 70 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~i 149 (287)
T 3pxx_A 70 GRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASI 149 (287)
T ss_dssp TSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEE
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEE
Confidence 567899999999999988877653 789999999986433 334566788999999999999999875 23599
Q ss_pred EEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 322 VFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 322 v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
|++||.+.+......+..|..+. +....|+.|| ...+.+.+.++.+. ++++..++|+.+
T Consensus 150 v~isS~~~~~~~~~~~~~~~~~~-~~~~~Y~asK---~a~~~~~~~la~e~~~~gi~vn~v~PG~v 211 (287)
T 3pxx_A 150 ITTGSVAGLIAAAQPPGAGGPQG-PGGAGYSYAK---QLVDSYTLQLAAQLAPQSIRANVIHPTNV 211 (287)
T ss_dssp EEECCHHHHHHHHCCC-----CH-HHHHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEESSB
T ss_pred EEeccchhcccccccccccccCC-CccchHHHHH---HHHHHHHHHHHHHHhhcCcEEEEEecCcc
Confidence 99999877654333333333322 2236799999 66788888888764 889999998764
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.69 E-value=8.2e-08 Score=94.46 Aligned_cols=118 Identities=13% Similarity=0.146 Sum_probs=90.0
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc-----ccccChHHHHHHHHHHHHHHHHHHHHc----
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVMKSH---- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~~~~~~---- 316 (600)
+.++.++.+|+++.+++.++++.. ++|++||+|+..... .+.++....+++|+.++.++++++...
T Consensus 59 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 138 (264)
T 3ucx_A 59 GRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES 138 (264)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH
T ss_pred CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 567899999999999988877653 689999999864221 223455678999999999999887642
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+ .++|++||...+... +....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 139 ~-g~iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~~~~~la~e~~~~gi~vn~v~PG~v 193 (264)
T 3ucx_A 139 K-GAVVNVNSMVVRHSQ------------AKYGAYKMAK---SALLAMSQTLATELGEKGIRVNSVLPGYI 193 (264)
T ss_dssp T-CEEEEECCGGGGCCC------------TTCHHHHHHH---HHHHHHHHHHHHHHHTTTCEEEEEEESSC
T ss_pred C-CEEEEECcchhccCC------------CccHHHHHHH---HHHHHHHHHHHHHhCccCeEEEEEecCcc
Confidence 3 699999998766321 2236899999 6678888888866 5788888888764
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=98.69 E-value=6.7e-08 Score=94.58 Aligned_cols=120 Identities=16% Similarity=0.094 Sum_probs=92.6
Q ss_pred hCCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc--CC
Q psy16545 250 TGKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GV 318 (600)
Q Consensus 250 ~~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~ 318 (600)
.+.++.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++... .-
T Consensus 52 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 131 (255)
T 4eso_A 52 FGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG 131 (255)
T ss_dssp HGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred hCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC
Confidence 3567899999999999888776642 6899999999764332 33456678999999999999999864 22
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
.++|++||.+.+... |....|+.|| ...+.+.+.++.+. ++++..++|+.+
T Consensus 132 g~iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~~~~~la~e~~~~gi~vn~v~PG~v 185 (255)
T 4eso_A 132 GSIVFTSSVADEGGH------------PGMSVYSASK---AALVSFASVLAAELLPRGIRVNSVSPGFI 185 (255)
T ss_dssp EEEEEECCGGGSSBC------------TTBHHHHHHH---HHHHHHHHHHHHHTGGGTCEEEEEEECSB
T ss_pred CEEEEECChhhcCCC------------CCchHHHHHH---HHHHHHHHHHHHHHhhhCcEEEEEecCcc
Confidence 489999998776431 2247899999 66788888888764 788888887654
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=98.68 E-value=3.2e-08 Score=100.74 Aligned_cols=112 Identities=12% Similarity=-0.043 Sum_probs=82.3
Q ss_pred HhhhHHhhhhccccccc-CCCCEEEEcCcccC--c----ccCCCChhhhHHhHHHHHHHHHHHHHHcC--CCeEEEecCc
Q psy16545 48 ANTDLAQKELGWSARCT-HDIDCVIHFAAVKA--V----GESMQEPLMYYKNNLIATINLLEVMKSHG--VYQLVFSSSC 118 (600)
Q Consensus 48 ~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~~~--~----~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~r~I~~SS~ 118 (600)
++.+++++ +.+. .++|++|||||... . ....+++...+++|+.|+.++++++...- -.++|++||.
T Consensus 99 ~v~~~~~~-----~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~ 173 (329)
T 3lt0_A 99 TIEDVANL-----IHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYH 173 (329)
T ss_dssp SHHHHHHH-----HHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECG
T ss_pred HHHHHHHH-----HHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeCc
Confidence 66665554 3332 26999999999642 1 11234567799999999999999986541 1589999997
Q ss_pred cccCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHhhc---CCceEEEEecccccCC
Q psy16545 119 TVYGEPQFLPITEDHPTGNIKN-VYGKTKHFIEEMLKDLSKAH---KEWNIISLRYFNPVGA 176 (600)
Q Consensus 119 ~vyg~~~~~~~~E~~~~~~p~s-~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~ 176 (600)
..+.. . ...+ .|+.||.+.+.+++.++.+. .+++++.+.||.|..+
T Consensus 174 ~~~~~-----------~-~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 174 ASQKV-----------V-PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp GGTSC-----------C-TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred cccCC-----------C-CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence 64421 1 3344 89999999999999988764 2899999999988766
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=98.67 E-value=8.6e-08 Score=94.63 Aligned_cols=119 Identities=13% Similarity=0.005 Sum_probs=89.9
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+...... ..++....+++|+.++.++++++.. .+
T Consensus 76 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 155 (270)
T 3ftp_A 76 GLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR 155 (270)
T ss_dssp TCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 556889999999999988877653 6899999999754332 3345567889999999999998763 34
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
..++|++||.+.+... +....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 156 ~g~iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~l~~~la~e~~~~gI~vn~v~PG~v 210 (270)
T 3ftp_A 156 GGRIVNITSVVGSAGN------------PGQVNYAAAK---AGVAGMTRALAREIGSRGITVNCVAPGFI 210 (270)
T ss_dssp CEEEEEECCHHHHHCC------------TTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CCEEEEECchhhCCCC------------CCchhHHHHH---HHHHHHHHHHHHHHhhhCeEEEEEEeCCC
Confidence 5699999997765321 2247899999 6678888888766 4777888877653
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=1e-07 Score=93.80 Aligned_cols=116 Identities=12% Similarity=0.051 Sum_probs=89.1
Q ss_pred eeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc--------c-ccccChHHHHHHHHHHHHHHHHHHHHcC--
Q psy16545 254 VDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV--------G-ESMQEPLMYYKNNLIATINLLEVMKSHG-- 317 (600)
Q Consensus 254 v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~--------~-~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-- 317 (600)
..++.+|+++++++.++++.. ++|++||+|+.... . .+.++....+++|+.++.++++++...-
T Consensus 61 ~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 140 (265)
T 1qsg_A 61 DIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP 140 (265)
T ss_dssp CCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred cEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 478999999999988877642 68999999997542 1 2334567789999999999999998752
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
-.++|++||.+.+... +....|+.|| ...+.+.+.++.+. ++++..++|+.+
T Consensus 141 ~g~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~PG~v 195 (265)
T 1qsg_A 141 GSALLTLSYLGAERAI------------PNYNVMGLAK---ASLEANVRYMANAMGPEGVRVNAISAGPI 195 (265)
T ss_dssp EEEEEEEECGGGTSBC------------TTTTHHHHHH---HHHHHHHHHHHHHHTTTTEEEEEEEECCC
T ss_pred CCEEEEEcchhhccCC------------CCchHHHHHH---HHHHHHHHHHHHHhhhcCeEEEEEEeCCC
Confidence 2499999997765321 2236899999 67888888888764 788888888764
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=2e-07 Score=91.58 Aligned_cols=119 Identities=12% Similarity=0.194 Sum_probs=92.0
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----------ccccChHHHHHHHHHHHHHHHHHHHH
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----------ESMQEPLMYYKNNLIATINLLEVMKS 315 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----------~~~~~~~~~~~~Nv~gt~~ll~~~~~ 315 (600)
+..+.++.+|+++.+++.++++.. ++|+|||+|+..... ...++....++.|+.++.++++++..
T Consensus 57 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 136 (265)
T 2o23_A 57 GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAG 136 (265)
T ss_dssp CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 567899999999999988887643 689999999975432 23345677889999999999999886
Q ss_pred c----------CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeec
Q psy16545 316 H----------GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFY 382 (600)
Q Consensus 316 ~----------~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~ 382 (600)
. +..++|++||...+... +....|+.+| ...+.+++.++.+ .++++..++|+
T Consensus 137 ~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg 201 (265)
T 2o23_A 137 EMGQNEPDQGGQRGVIINTASVAAFEGQ------------VGQAAYSASK---GGIVGMTLPIARDLAPIGIRVMTIAPG 201 (265)
T ss_dssp HHTTSCCCTTSCCEEEEEECCTHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred HHHhcccccCCCCcEEEEeCChhhcCCC------------CCCchhHHHH---HHHHHHHHHHHHHHhhcCcEEEEEEec
Confidence 5 56799999998876431 1237899999 6677777777765 47888888876
Q ss_pred cc
Q psy16545 383 NL 384 (600)
Q Consensus 383 ~~ 384 (600)
.+
T Consensus 202 ~v 203 (265)
T 2o23_A 202 LF 203 (265)
T ss_dssp CB
T ss_pred cc
Confidence 54
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.67 E-value=4e-07 Score=90.54 Aligned_cols=117 Identities=11% Similarity=0.008 Sum_probs=89.9
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc--------cccccChHHHHHHHHHHHHHHHHHHHHcC--
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV--------GESMQEPLMYYKNNLIATINLLEVMKSHG-- 317 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-- 317 (600)
.+.++.+|+++.+++.++++.. ++|++||+|+.... ..+.++....+++|+.++.++++++...-
T Consensus 72 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 151 (285)
T 2p91_A 72 SDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEG 151 (285)
T ss_dssp CCCEEECCTTCHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTT
T ss_pred CeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3788999999999988877643 68999999997542 22334556789999999999999998652
Q ss_pred -CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 -VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 -~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
-.++|++||.+.+... +....|+.|| ...+.+++.++.+ .++++..++|+.+
T Consensus 152 ~~g~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~PG~v 207 (285)
T 2p91_A 152 RNGAIVTLSYYGAEKVV------------PHYNVMGIAK---AALESTVRYLAYDIAKHGHRINAISAGPV 207 (285)
T ss_dssp SCCEEEEEECGGGTSBC------------TTTTHHHHHH---HHHHHHHHHHHHHHHTTTCEEEEEEECCC
T ss_pred cCCEEEEEccchhccCC------------CCccHHHHHH---HHHHHHHHHHHHHhcccCcEEEEEEeCcc
Confidence 2699999997765321 2236899999 6678888888765 3899999998764
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.67 E-value=1.1e-07 Score=92.35 Aligned_cols=117 Identities=12% Similarity=0.149 Sum_probs=89.9
Q ss_pred ceeEEEeecCChhhHHHHhhcC---CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHcCC--CEEEE
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH---DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHGV--YQLVF 323 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~---~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~~~--~r~v~ 323 (600)
.+.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++...-. .++|+
T Consensus 45 ~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~ 124 (244)
T 4e4y_A 45 NLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVF 124 (244)
T ss_dssp TEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEE
T ss_pred cceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEE
Confidence 4688999999999998887543 6899999999754322 3345567789999999999999886522 48999
Q ss_pred ecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHH---HhCCCCeeEeeccc
Q psy16545 324 SSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER---VTGNKPVPYIFYNL 384 (600)
Q Consensus 324 ~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~---~~~~~~~~~r~~~~ 384 (600)
+||...+... +....|+.|| ...+.+.+.++. .+++++..++|+.+
T Consensus 125 ~sS~~~~~~~------------~~~~~Y~asK---aa~~~~~~~la~e~~~~gi~v~~v~PG~v 173 (244)
T 4e4y_A 125 NGSDQCFIAK------------PNSFAYTLSK---GAIAQMTKSLALDLAKYQIRVNTVCPGTV 173 (244)
T ss_dssp ECCGGGTCCC------------TTBHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEESCB
T ss_pred ECCHHHccCC------------CCCchhHHHH---HHHHHHHHHHHHHHHHcCeEEEEEecCcc
Confidence 9998776321 2236899999 667888888876 45788888888764
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.67 E-value=2.6e-08 Score=101.12 Aligned_cols=117 Identities=10% Similarity=-0.011 Sum_probs=88.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHHcC----
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKSHG---- 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~---- 317 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+..... .+.++....+++|+.++.++++++...-
T Consensus 85 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~ 164 (322)
T 3qlj_A 85 GGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLS 164 (322)
T ss_dssp TCEEEEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcc
Confidence 456889999999999988877653 789999999976432 2334556789999999999999876431
Q ss_pred ------CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeec
Q psy16545 318 ------VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFY 382 (600)
Q Consensus 318 ------~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~ 382 (600)
-.++|++||.+.+... +....|+.|| ...+.+++.++.+ +++++..+.|+
T Consensus 165 ~~~~~~~g~IV~isS~~~~~~~------------~~~~~Y~asK---aal~~l~~~la~e~~~~gI~vn~v~PG 223 (322)
T 3qlj_A 165 KAGKAVDGRIINTSSGAGLQGS------------VGQGNYSAAK---AGIATLTLVGAAEMGRYGVTVNAIAPS 223 (322)
T ss_dssp HTTCCCCEEEEEECCHHHHHCB------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred ccCCCCCcEEEEEcCHHHccCC------------CCCccHHHHH---HHHHHHHHHHHHHhcccCcEEEEecCC
Confidence 1499999997765321 1236899999 6688888888876 57777777765
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.66 E-value=5.8e-08 Score=96.01 Aligned_cols=119 Identities=18% Similarity=0.138 Sum_probs=90.5
Q ss_pred CCceeEEEeecCChhhHHHHhhc----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGV 318 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~~ 318 (600)
+..+.++.+|+++.+++.++.+. .++|++||+|+...... +.++....+++|+.++.++++++. +.+.
T Consensus 78 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 157 (273)
T 3uf0_A 78 GGSAEAVVADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGS 157 (273)
T ss_dssp TCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 45688999999999988776442 27899999999864322 334556789999999999999874 3456
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.++|++||.+.+... +....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 158 g~IV~isS~~~~~~~------------~~~~~Y~asK---aa~~~l~~~la~e~~~~gI~vn~v~PG~v 211 (273)
T 3uf0_A 158 GRIVTIASMLSFQGG------------RNVAAYAASK---HAVVGLTRALASEWAGRGVGVNALAPGYV 211 (273)
T ss_dssp EEEEEECCGGGTSCC------------SSCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CEEEEEcchHhcCCC------------CCChhHHHHH---HHHHHHHHHHHHHHhhcCcEEEEEEeCCC
Confidence 799999998776321 2237899999 6688888888876 5788888887653
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.66 E-value=4.1e-08 Score=96.85 Aligned_cols=117 Identities=12% Similarity=0.058 Sum_probs=89.7
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc---------ccccChHHHHHHHHHHHHHHHHHHHHc--
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG---------ESMQEPLMYYKNNLIATINLLEVMKSH-- 316 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~---------~~~~~~~~~~~~Nv~gt~~ll~~~~~~-- 316 (600)
.+.++.+|+++.+++.++++.. ++|++||+|+..... ....+....+++|+.++.++++++...
T Consensus 65 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 144 (271)
T 3ek2_A 65 SELVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLS 144 (271)
T ss_dssp CCCEEECCTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEE
T ss_pred CcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhc
Confidence 4789999999999998887753 689999999976431 334456778999999999999999765
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
.-.++|++||.+.+... +....|+.|| ...+.+.+.++.+. ++++..++|+.+
T Consensus 145 ~~g~iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~~~~~la~e~~~~gi~v~~v~PG~v 200 (271)
T 3ek2_A 145 DDASLLTLSYLGAERAI------------PNYNTMGLAK---AALEASVRYLAVSLGAKGVRVNAISAGPI 200 (271)
T ss_dssp EEEEEEEEECGGGTSBC------------TTTTHHHHHH---HHHHHHHHHHHHHHHTTTCEEEEEEECCC
T ss_pred cCceEEEEeccccccCC------------CCccchhHHH---HHHHHHHHHHHHHHHhcCcEEEEEecCcc
Confidence 22489999998766421 2247899999 66788888877653 788888887654
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=98.66 E-value=2.2e-07 Score=92.14 Aligned_cols=120 Identities=16% Similarity=0.146 Sum_probs=87.8
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCc------cccccChHHHHHHHHHH----HHHHHHHHHH
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAV------GESMQEPLMYYKNNLIA----TINLLEVMKS 315 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~------~~~~~~~~~~~~~Nv~g----t~~ll~~~~~ 315 (600)
+.++.++.+|+++.+++.++++. .++|+|||+|+.... ....++....++.|+.+ +.++++.+++
T Consensus 82 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 161 (279)
T 3ctm_A 82 GVHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKK 161 (279)
T ss_dssp CSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CCcceEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 56789999999999998888764 258999999997643 22233456788999999 5677777777
Q ss_pred cCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCC--CCeeEeecc
Q psy16545 316 HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGN--KPVPYIFYN 383 (600)
Q Consensus 316 ~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~--~~~~~r~~~ 383 (600)
.+.++||++||.+.+... + .+....|+.+| ...|.+++.++.+.+- ++..++|+.
T Consensus 162 ~~~~~iv~isS~~~~~~~---------~-~~~~~~Y~~sK---~a~~~~~~~la~e~~~~~~v~~v~Pg~ 218 (279)
T 3ctm_A 162 NGKGSLIITSSISGKIVN---------I-PQLQAPYNTAK---AACTHLAKSLAIEWAPFARVNTISPGY 218 (279)
T ss_dssp HTCCEEEEECCCTTSCC-------------CCHHHHHHHH---HHHHHHHHHHHHHTTTTCEEEEEEECS
T ss_pred cCCCeEEEECchHhccCC---------C-CCCcccHHHHH---HHHHHHHHHHHHHhcccCCEEEEeccC
Confidence 778899999998765320 0 12236899999 7789999988876422 566677654
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=98.66 E-value=1.7e-07 Score=92.15 Aligned_cols=118 Identities=15% Similarity=0.104 Sum_probs=89.5
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGV 318 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~ 318 (600)
.++.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++.. .+.
T Consensus 46 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 125 (264)
T 2dtx_A 46 AKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRD 125 (264)
T ss_dssp CSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 35788999999999988877642 6899999999754322 3345667899999999999888865 346
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhC--CCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTG--NKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~--~~~~~~r~~~~ 384 (600)
+++|++||.+.+... +....|+.|| ...+.+.+.++.+.+ +++..++|+.+
T Consensus 126 g~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~i~vn~v~PG~v 178 (264)
T 2dtx_A 126 PSIVNISSVQASIIT------------KNASAYVTSK---HAVIGLTKSIALDYAPLLRCNAVCPATI 178 (264)
T ss_dssp CEEEEECCGGGTSCC------------TTBHHHHHHH---HHHHHHHHHHHHHHTTTSEEEEEEECSB
T ss_pred cEEEEECCchhccCC------------CCchhHHHHH---HHHHHHHHHHHHHhcCCcEEEEEEeCCC
Confidence 799999998876421 2247899999 678888888887765 66677776553
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=1.1e-07 Score=93.16 Aligned_cols=119 Identities=13% Similarity=-0.012 Sum_probs=89.7
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++. +.+
T Consensus 53 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~ 132 (258)
T 3oid_A 53 GVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG 132 (258)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT
T ss_pred CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 457899999999999998887753 6899999998654322 223455678999999999998885 345
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
..++|++||.+.+... +....|+.|| ...+.+.+.++.+. ++++..++|+.+
T Consensus 133 ~g~iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~l~~~la~e~~~~gi~vn~v~PG~v 187 (258)
T 3oid_A 133 GGHIVSISSLGSIRYL------------ENYTTVGVSK---AALEALTRYLAVELSPKQIIVNAVSGGAI 187 (258)
T ss_dssp CEEEEEEEEGGGTSBC------------TTCHHHHHHH---HHHHHHHHHHHHHTGGGTEEEEEEEECCB
T ss_pred CcEEEEECchhhCCCC------------CCcHHHHHHH---HHHHHHHHHHHHHHhhcCcEEEEEeeCCC
Confidence 5699999998766321 2247899999 66888888888764 677777776653
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=98.65 E-value=7.1e-08 Score=95.01 Aligned_cols=122 Identities=14% Similarity=0.058 Sum_probs=85.5
Q ss_pred hhhCCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHH----
Q psy16545 248 QFTGKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK---- 314 (600)
Q Consensus 248 ~l~~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~---- 314 (600)
+..+..+.++.+|+++.+++.++++.. ++|++||+|+..... ...++....+++|+.++.++.+++.
T Consensus 69 ~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 148 (266)
T 3grp_A 69 ADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMM 148 (266)
T ss_dssp HHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334667899999999999988877642 689999999976432 1234556778999999766666554
Q ss_pred HcCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 315 SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 315 ~~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+.+..++|++||.+.+... +....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 149 ~~~~g~Iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~~~~~la~e~~~~gI~vn~v~PG~v 206 (266)
T 3grp_A 149 RRRYGRIINITSIVGVVGN------------PGQTNYCAAK---AGLIGFSKALAQEIASRNITVNCIAPGFI 206 (266)
T ss_dssp HHTCEEEEEECCC-------------------CHHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HcCCcEEEEECCHHHcCCC------------CCchhHHHHH---HHHHHHHHHHHHHhhhhCcEEEEEeeCcC
Confidence 4456799999997655321 2237899999 6678888888765 4677888887653
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.65 E-value=3.7e-07 Score=88.59 Aligned_cols=126 Identities=11% Similarity=-0.028 Sum_probs=93.6
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-------CccEEEEcccccC-c----cccccChHHHHHHHHHHHHHHHHHHHHc--
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-------DIDCVIHFAAVKA-V----GESMQEPLMYYKNNLIATINLLEVMKSH-- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-------~~d~VihlAa~~~-~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-- 316 (600)
+.++.++.+|+++.+++.++++.. ++|+|||+|+... . ....++....+++|+.++.++++++...
T Consensus 50 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 129 (250)
T 1yo6_A 50 DSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLK 129 (250)
T ss_dssp CTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHH
T ss_pred CCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 457899999999999988887743 7999999999764 1 1233455678899999999999887653
Q ss_pred --------C-----CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEe
Q psy16545 317 --------G-----VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYI 380 (600)
Q Consensus 317 --------~-----~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r 380 (600)
+ ..+||++||...+..... ++.+ .+....|+.+| ...+.+++.++... ++++..++
T Consensus 130 ~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----~~~~-~~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~ 201 (250)
T 1yo6_A 130 NAASKESGDQLSVSRAAVITISSGLGSITDNT----SGSA-QFPVLAYRMSK---AAINMFGRTLAVDLKDDNVLVVNFC 201 (250)
T ss_dssp HHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC----STTS-SSCBHHHHHHH---HHHHHHHHHHHHHTGGGTCEEEEEE
T ss_pred hcccccCCCcccCCCcEEEEeccCccccCCcc----cccc-cCCccHHHHHH---HHHHHHHHHHHHHhccCCeEEEEEc
Confidence 4 679999999876643211 1111 12347899999 77888888888764 78888998
Q ss_pred eccc
Q psy16545 381 FYNL 384 (600)
Q Consensus 381 ~~~~ 384 (600)
|+.+
T Consensus 202 Pg~v 205 (250)
T 1yo6_A 202 PGWV 205 (250)
T ss_dssp CCCC
T ss_pred CCce
Confidence 7654
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.65 E-value=3.5e-07 Score=90.63 Aligned_cols=123 Identities=15% Similarity=0.104 Sum_probs=93.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc----C-CCE
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH----G-VYQ 320 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~-~~r 320 (600)
+.++.++.+|+++.+++.++++.. ++|++||+|+........++....+++|+.++.++++++... + ..+
T Consensus 73 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~ 152 (278)
T 3sx2_A 73 GSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGS 152 (278)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEE
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcE
Confidence 567899999999999998887753 689999999987655455667788999999999999987642 2 469
Q ss_pred EEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 321 LVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 321 ~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+|++||.+.+..... ..+....|+.|| ...+.+++.++.+. ++++..++|+.+
T Consensus 153 iv~isS~~~~~~~~~--------~~~~~~~Y~asK---aa~~~~~~~la~e~~~~gi~vn~v~PG~v 208 (278)
T 3sx2_A 153 IVLISSSAGLAGVGS--------ADPGSVGYVAAK---HGVVGLMRVYANLLAGQMIRVNSIHPSGV 208 (278)
T ss_dssp EEEECCGGGTSCCCC--------SSHHHHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEESCB
T ss_pred EEEEccHHhcCCCcc--------CCCCchHhHHHH---HHHHHHHHHHHHHHhccCcEEEEEecCCc
Confidence 999999876532110 012236799999 66788888887654 588888887663
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.64 E-value=1.4e-07 Score=92.26 Aligned_cols=119 Identities=13% Similarity=0.058 Sum_probs=88.8
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+..... .+.++....+++|+.++.++++++. +.+
T Consensus 62 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 141 (256)
T 3ezl_A 62 GFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG 141 (256)
T ss_dssp TCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 456889999999999988887753 689999999976432 2334556789999999888877664 456
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
..++|++||.+.+... +....|+.|| ...+.+++.++.+ .++++..++|+.+
T Consensus 142 ~g~iv~isS~~~~~~~------------~~~~~Y~asK---~a~~~~~~~la~e~~~~gi~v~~v~PG~v 196 (256)
T 3ezl_A 142 WGRIINISSVNGQKGQ------------FGQTNYSTAK---AGIHGFTMSLAQEVATKGVTVNTVSPGYI 196 (256)
T ss_dssp CEEEEEECCCCGGGSC------------SCCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CCEEEEEcchhhccCC------------CCCcccHHHH---HHHHHHHHHHHHHHHHhCCEEEEEEECcc
Confidence 6799999997765321 2247899999 6678888887765 4677777776543
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=98.64 E-value=6.9e-08 Score=96.46 Aligned_cols=130 Identities=14% Similarity=0.054 Sum_probs=97.6
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-CccEEEEcccccCcc--ccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-DIDCVIHFAAVKAVG--ESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSC 327 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~~--~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~ 327 (600)
+..++++.+|+++.+++.++++.. ++|++||+|+..... .+.++....+++|+.++.++++++.....+|+|++||.
T Consensus 61 ~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~ 140 (291)
T 3rd5_A 61 AGQVEVRELDLQDLSSVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSM 140 (291)
T ss_dssp SSEEEEEECCTTCHHHHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCG
T ss_pred cCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeech
Confidence 567899999999999999998865 689999999976432 23456778999999999999999998866799999998
Q ss_pred ccccCC-CCCCCCCC-CCCCCCCcccccchhhHHHHHHHHHHHHHHh---C--CCCeeEeeccc
Q psy16545 328 TVYGEP-QFLPITED-HPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---G--NKPVPYIFYNL 384 (600)
Q Consensus 328 ~vYg~~-~~~~~~E~-~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~--~~~~~~r~~~~ 384 (600)
+.|... ...+..++ .+. +....|+.|| ...+.+.+.++.+. + +++..++|+.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK---~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v 200 (291)
T 3rd5_A 141 AHWPGRINLEDLNWRSRRY-SPWLAYSQSK---LANLLFTSELQRRLTAAGSPLRALAAHPGYS 200 (291)
T ss_dssp GGTTCCCCSSCTTCSSSCC-CHHHHHHHHH---HHHHHHHHHHHHHHHHTTCCCEEEEECCSGG
T ss_pred hhccCCCCcccccccccCC-CCcchHHHHH---HHHHHHHHHHHHHHhhCCCCEEEEEeeCCCC
Confidence 877532 22222222 222 2236899999 66788888777654 4 66777776653
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.64 E-value=1.3e-07 Score=92.55 Aligned_cols=115 Identities=18% Similarity=0.161 Sum_probs=86.6
Q ss_pred eEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCCCEE
Q psy16545 255 DFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQL 321 (600)
Q Consensus 255 ~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~r~ 321 (600)
.++.+|+++.+++.++++.. ++|++||+|+...... ..++....+++|+.++.++++++.. .+.+++
T Consensus 52 ~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~i 131 (256)
T 2d1y_A 52 AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAI 131 (256)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEE
T ss_pred CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEE
Confidence 78899999999888877642 6899999999764322 2234567889999999999888764 356799
Q ss_pred EEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 322 VFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 322 v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
|++||.+.+... +....|+.|| ...+.+.+.++.+ .++++..++|+.+
T Consensus 132 v~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 182 (256)
T 2d1y_A 132 VNVASVQGLFAE------------QENAAYNASK---GGLVNLTRSLALDLAPLRIRVNAVAPGAI 182 (256)
T ss_dssp EEECCGGGTSBC------------TTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred EEEccccccCCC------------CCChhHHHHH---HHHHHHHHHHHHHHhhcCeEEEEEeeCCc
Confidence 999998765321 2247899999 6678888888765 3677778887654
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=98.64 E-value=2.4e-07 Score=90.14 Aligned_cols=120 Identities=10% Similarity=0.057 Sum_probs=90.2
Q ss_pred hCCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----c
Q psy16545 250 TGKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----H 316 (600)
Q Consensus 250 ~~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~ 316 (600)
.+....++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++.. .
T Consensus 53 ~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~ 132 (248)
T 3op4_A 53 LGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK 132 (248)
T ss_dssp HGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred hcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 3456788999999999988887753 6899999999764322 3345567899999999999998764 4
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+..++|++||.+.+-.. +....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 133 ~~g~iv~isS~~~~~~~------------~~~~~Y~asK---~a~~~l~~~la~e~~~~gi~vn~v~PG~v 188 (248)
T 3op4_A 133 RQGRIINVGSVVGTMGN------------AGQANYAAAK---AGVIGFTKSMAREVASRGVTVNTVAPGFI 188 (248)
T ss_dssp TCEEEEEECCHHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CCCEEEEEcchhhcCCC------------CCChHHHHHH---HHHHHHHHHHHHHHHHhCeEEEEEeeCCC
Confidence 55799999997665321 2247899999 6678888887765 4777878877653
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=1.1e-07 Score=94.19 Aligned_cols=119 Identities=14% Similarity=0.081 Sum_probs=89.9
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc-----
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----- 316 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+...... ..++....+++|+.++.++++++...
T Consensus 70 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~ 149 (277)
T 2rhc_B 70 GVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLE 149 (277)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHH
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhh
Confidence 456889999999999988877642 6899999999754321 22345678899999999999997654
Q ss_pred -CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 317 -GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 317 -~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+.+++|++||.+.+.. .+....|+.+| ...+.+.+.++.+. ++++..++|+.+
T Consensus 150 ~~~g~iv~isS~~~~~~------------~~~~~~Y~asK---~a~~~~~~~la~e~~~~gi~v~~v~PG~v 206 (277)
T 2rhc_B 150 RGTGRIVNIASTGGKQG------------VVHAAPYSASK---HGVVGFTKALGLELARTGITVNAVCPGFV 206 (277)
T ss_dssp HTEEEEEEECCGGGTSC------------CTTCHHHHHHH---HHHHHHHHHHHHHHTTTEEEEEEEEECSB
T ss_pred cCCeEEEEECccccccC------------CCCCccHHHHH---HHHHHHHHHHHHHHHHhCcEEEEEecCcC
Confidence 5579999999865432 12237899999 66788888887653 678888887764
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=98.63 E-value=2.6e-07 Score=91.58 Aligned_cols=119 Identities=17% Similarity=0.091 Sum_probs=90.5
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH------
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS------ 315 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~------ 315 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+...... ..++....+++|+.++.++++++..
T Consensus 72 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 151 (279)
T 3sju_A 72 GHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMRE 151 (279)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhh
Confidence 457899999999999988877653 6899999999764322 2234456788999999999998765
Q ss_pred cCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 316 HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 316 ~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.+..++|++||.+.+... +....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 152 ~~~g~iV~isS~~~~~~~------------~~~~~Y~asK---aa~~~l~~~la~e~~~~gi~vn~v~PG~v 208 (279)
T 3sju_A 152 AGWGRIVNIASTGGKQGV------------MYAAPYTASK---HGVVGFTKSVGFELAKTGITVNAVCPGYV 208 (279)
T ss_dssp HTCEEEEEECCGGGTSCC------------TTCHHHHHHH---HHHHHHHHHHHHHTGGGTEEEEEEEESSB
T ss_pred cCCcEEEEECChhhccCC------------CCChhHHHHH---HHHHHHHHHHHHHHHhhCcEEEEEeeCcc
Confidence 355799999998766321 2237899999 6678888888876 5788888887654
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=98.63 E-value=9.8e-08 Score=92.95 Aligned_cols=118 Identities=12% Similarity=0.070 Sum_probs=87.2
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGV 318 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~~ 318 (600)
.+++++.+|+++.+++.++++.. ++|+|||+|+...... ..++....++.|+.++.++.+++. +.+.
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~ 133 (251)
T 1zk4_A 54 DQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL 133 (251)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC
Confidence 46889999999999988887642 5899999999754221 223456788999998877666554 4556
Q ss_pred -CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHH-----HhCCCCeeEeeccc
Q psy16545 319 -YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER-----VTGNKPVPYIFYNL 384 (600)
Q Consensus 319 -~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~-----~~~~~~~~~r~~~~ 384 (600)
++||++||...|... +....|+.+| ...|.+++.++. ..+++++.+||+.+
T Consensus 134 ~~~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v 190 (251)
T 1zk4_A 134 GASIINMSSIEGFVGD------------PSLGAYNASK---GAVRIMSKSAALDCALKDYDVRVNTVHPGYI 190 (251)
T ss_dssp CEEEEEECCGGGTSCC------------TTCHHHHHHH---HHHHHHHHHHHHHHHHTTCSEEEEEEEECCB
T ss_pred CCEEEEeCCchhccCC------------CCCccchHHH---HHHHHHHHHHHHHhcccCCCeEEEEEeeCcC
Confidence 799999998876431 2237899999 667888877765 34788888888764
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.63 E-value=1e-07 Score=94.61 Aligned_cols=119 Identities=14% Similarity=0.106 Sum_probs=84.0
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc------ccccChHHHHHHHHHHHHHHHHHHHHc---
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG------ESMQEPLMYYKNNLIATINLLEVMKSH--- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~------~~~~~~~~~~~~Nv~gt~~ll~~~~~~--- 316 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+..... .+.++....+++|+.++.++++++...
T Consensus 78 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 157 (280)
T 4da9_A 78 GARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLA 157 (280)
T ss_dssp TCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 567899999999999988877753 789999999973211 133455677889999999988887653
Q ss_pred -C---CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 -G---VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 -~---~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+ ..++|++||.+.+... +....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 158 ~~~~~~g~Iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~l~~~la~e~~~~gI~vn~v~PG~v 217 (280)
T 4da9_A 158 SDARASRSIINITSVSAVMTS------------PERLDYCMSK---AGLAAFSQGLALRLAETGIAVFEVRPGII 217 (280)
T ss_dssp HCCCCCEEEEEECCC-------------------CCHHHHHHH---HHHHHHHHHHHHHHTTTTEEEEEEEECCB
T ss_pred hCCCCCCEEEEEcchhhccCC------------CCccHHHHHH---HHHHHHHHHHHHHHHHhCcEEEEEeecCC
Confidence 2 3589999997765321 2236899999 6688888888876 4677777777653
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.63 E-value=3.1e-07 Score=90.92 Aligned_cols=120 Identities=13% Similarity=0.068 Sum_probs=90.7
Q ss_pred hCCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----c
Q psy16545 250 TGKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----H 316 (600)
Q Consensus 250 ~~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~ 316 (600)
.+..+.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++.. .
T Consensus 71 ~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 150 (277)
T 4dqx_A 71 IGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN 150 (277)
T ss_dssp HCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT
T ss_pred hCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 4667899999999999988887753 6899999999754332 2234456788999999998888854 3
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+..++|++||.+.+... +....|+.|| ...+.+.+.++.+. ++++..++|+.+
T Consensus 151 ~~g~iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~l~~~la~e~~~~gi~vn~v~PG~v 206 (277)
T 4dqx_A 151 GGGSIINTTSYTATSAI------------ADRTAYVASK---GAISSLTRAMAMDHAKEGIRVNAVAPGTI 206 (277)
T ss_dssp TCEEEEEECCGGGTSCC------------TTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CCcEEEEECchhhCcCC------------CCChhHHHHH---HHHHHHHHHHHHHhhhcCeEEEEEeeCcC
Confidence 44699999998876421 2247899999 66788888887664 677777777654
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=98.62 E-value=3.2e-07 Score=89.85 Aligned_cols=119 Identities=15% Similarity=0.188 Sum_probs=90.6
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
+.++.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++... +
T Consensus 52 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 131 (258)
T 3a28_C 52 DQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG 131 (258)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC
Confidence 456889999999999888877642 6899999999754321 23455678999999999999888753 5
Q ss_pred C-CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 V-YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~-~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
. .++|++||.+.+... +....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 132 ~~g~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~vn~v~PG~v 187 (258)
T 3a28_C 132 VKGKIINAASIAAIQGF------------PILSAYSTTK---FAVRGLTQAAAQELAPKGHTVNAYAPGIV 187 (258)
T ss_dssp CCCEEEEECCGGGTSCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECCB
T ss_pred CCcEEEEECcchhccCC------------CCchhHHHHH---HHHHHHHHHHHHHHHhhCeEEEEEECCcc
Confidence 6 799999998765321 2237899999 6678888887765 4788888888654
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.9e-07 Score=92.05 Aligned_cols=119 Identities=15% Similarity=0.090 Sum_probs=89.7
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+.++.++.+|+++.+++.++++.. ++|++||+|+...... ..++....+++|+.++.++++++.. .+
T Consensus 74 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 153 (269)
T 3gk3_A 74 GRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR 153 (269)
T ss_dssp TCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 457899999999999988877653 7999999999764332 3345567889999999999988754 45
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
..++|++||.+.+... +....|+.|| ...+.+++.++.+. ++++..++|+.+
T Consensus 154 ~g~iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~~~~~la~e~~~~gi~v~~v~PG~v 208 (269)
T 3gk3_A 154 FGRIVNIGSVNGSRGA------------FGQANYASAK---AGIHGFTKTLALETAKRGITVNTVSPGYL 208 (269)
T ss_dssp CEEEEEECCHHHHHCC------------TTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CCEEEEeCChhhccCC------------CCcchHHHHH---HHHHHHHHHHHHHhhhcCCEEEEEecCcc
Confidence 5799999997765321 2247899999 66778888777653 677777777653
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=98.61 E-value=1.4e-07 Score=92.81 Aligned_cols=113 Identities=16% Similarity=0.121 Sum_probs=85.2
Q ss_pred EEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCCCEEEE
Q psy16545 257 YSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVF 323 (600)
Q Consensus 257 i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~----~~~~~~r~v~ 323 (600)
+.+|+++.+.+.++++.. ++|++||+|+...... ..++....+++|+.++.++++++ ++.+..++|+
T Consensus 71 ~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~ 150 (266)
T 3uxy_A 71 LPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVN 150 (266)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred cCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 368999988887766542 6899999999865322 23455677889999999999988 4456679999
Q ss_pred ecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 324 SSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 324 ~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+||.+.+.. .+....|+.|| ...+.+.+.++.+. ++++..++|+.+
T Consensus 151 isS~~~~~~------------~~~~~~Y~asK---aa~~~l~~~la~e~~~~gI~vn~v~PG~v 199 (266)
T 3uxy_A 151 VASCWGLRP------------GPGHALYCLTK---AALASLTQCMGMDHAPQGIRINAVCPNEV 199 (266)
T ss_dssp ECCSBTTBC------------CTTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred ECCHHhCCC------------CCCChHHHHHH---HHHHHHHHHHHHHhhhcCcEEEEEeeCCC
Confidence 999876632 12247899999 66888888888664 788888887664
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.61 E-value=1.9e-07 Score=93.58 Aligned_cols=117 Identities=16% Similarity=0.132 Sum_probs=89.4
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc------cccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE------SMQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~------~~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
.+.++.+|+++.+++.++++.. ++|++||+|+...... ..++....+++|+.++.++++++... +
T Consensus 79 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 158 (297)
T 1xhl_A 79 KINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK 158 (297)
T ss_dssp GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred eEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC
Confidence 6889999999999988877642 6899999999753221 23455678999999999999887753 4
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.++|++||...+... .+....|+.+| ...+.+.+.++.+ +++++..++|+.+
T Consensus 159 -g~IV~isS~~~~~~~-----------~~~~~~Y~asK---aa~~~l~~~la~el~~~gI~v~~v~PG~v 213 (297)
T 1xhl_A 159 -GEIVNVSSIVAGPQA-----------HSGYPYYACAK---AALDQYTRCTAIDLIQHGVRVNSVSPGAV 213 (297)
T ss_dssp -CEEEEECCGGGSSSC-----------CTTSHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECCB
T ss_pred -CEEEEEcCchhccCC-----------CCCcchHHHHH---HHHHHHHHHHHHHhcccCeEEEEEeeCCC
Confidence 799999998776431 02236899999 6677888877754 5899999998764
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.61 E-value=4.6e-07 Score=89.53 Aligned_cols=119 Identities=13% Similarity=0.162 Sum_probs=91.1
Q ss_pred CCceeEEEeecCChhhHHHHhhc------CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----Hc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK------HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SH 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~------~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~ 316 (600)
+..+.++.+|+++++++.++++. .++|++||+|+...... ..++....+++|+.++.++++++. +.
T Consensus 69 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 148 (273)
T 1ae1_A 69 GLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS 148 (273)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 45688999999999988887753 37999999999754321 233456678899999999999884 34
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+..++|++||.+.|... +....|+.|| ...+.+.+.++.+. ++++..++|+.+
T Consensus 149 ~~g~iv~isS~~~~~~~------------~~~~~Y~asK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 204 (273)
T 1ae1_A 149 QNGNVIFLSSIAGFSAL------------PSVSLYSASK---GAINQMTKSLACEWAKDNIRVNSVAPGVI 204 (273)
T ss_dssp TSEEEEEECCGGGTSCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CCcEEEEEcCHhhcCCC------------CCcchhHHHH---HHHHHHHHHHHHHHhhcCcEEEEEEeCCC
Confidence 56799999998887531 2237899999 66788888877654 889999998764
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=98.61 E-value=3.2e-07 Score=90.27 Aligned_cols=117 Identities=17% Similarity=0.191 Sum_probs=87.4
Q ss_pred HHHHhhhCCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH
Q psy16545 244 RAIEQFTGKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK 314 (600)
Q Consensus 244 ~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~ 314 (600)
..+.+..+..+.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++.
T Consensus 65 ~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 144 (267)
T 3gdg_A 65 KELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVG 144 (267)
T ss_dssp HHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHH
Confidence 3344444678999999999999988887753 6899999999764332 334556789999999999999883
Q ss_pred ----HcCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhC
Q psy16545 315 ----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTG 373 (600)
Q Consensus 315 ----~~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~ 373 (600)
+.+..++|++||.+.+.... .+....|+.|| ...+.+++.++.+.+
T Consensus 145 ~~~~~~~~g~iv~isS~~~~~~~~----------~~~~~~Y~~sK---~a~~~~~~~la~e~~ 194 (267)
T 3gdg_A 145 HHFKERGTGSLVITASMSGHIANF----------PQEQTSYNVAK---AGCIHMARSLANEWR 194 (267)
T ss_dssp HHHHHHTCCEEEEECCGGGTSCCS----------SSCCHHHHHHH---HHHHHHHHHHHHHTT
T ss_pred HHHHHcCCceEEEEccccccccCC----------CCCCCcchHHH---HHHHHHHHHHHHHhc
Confidence 44567999999977553211 01237899999 678899999888765
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.61 E-value=3.7e-07 Score=89.34 Aligned_cols=119 Identities=11% Similarity=-0.013 Sum_probs=89.0
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHH-----Hc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK-----SH 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~-----~~ 316 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+..... .+.++....+++|+.++.++++++. +.
T Consensus 54 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 133 (257)
T 3imf_A 54 PGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKG 133 (257)
T ss_dssp TTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhC
Confidence 346889999999999988887753 789999999964322 1234556789999999999999884 33
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHH----HhCCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER----VTGNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~----~~~~~~~~~r~~~~ 384 (600)
+..++|++||...+... +....|+.|| ...+.+.+.++. .+++++..++|+.+
T Consensus 134 ~~g~iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~l~~~la~e~~~~~gIrvn~v~PG~v 190 (257)
T 3imf_A 134 IKGNIINMVATYAWDAG------------PGVIHSAAAK---AGVLAMTKTLAVEWGRKYGIRVNAIAPGPI 190 (257)
T ss_dssp CCCEEEEECCGGGGSCC------------TTCHHHHHHH---HHHHHHHHHHHHHHHHHHCCEEEEEEECCB
T ss_pred CCcEEEEECchhhccCC------------CCcHHHHHHH---HHHHHHHHHHHHHhccccCeEEEEEEECCC
Confidence 45799999998766321 2236899999 556777766663 45899999998763
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.61 E-value=3.2e-07 Score=90.33 Aligned_cols=120 Identities=14% Similarity=0.091 Sum_probs=90.5
Q ss_pred hCCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----
Q psy16545 250 TGKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH---- 316 (600)
Q Consensus 250 ~~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~---- 316 (600)
.+.++.++.+|+++.+++.++++.. ++|++||+|+...... ..++....+++|+.++.++++++...
T Consensus 68 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 147 (266)
T 4egf_A 68 FGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAA 147 (266)
T ss_dssp HCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 4678999999999999888877643 7899999999764322 23345667899999999999887643
Q ss_pred C-CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 G-VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 ~-~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+ ..++|++||.+.+... +....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 148 ~~~g~iv~isS~~~~~~~------------~~~~~Y~asK---~a~~~l~~~la~e~~~~gI~vn~v~PG~v 204 (266)
T 4egf_A 148 GEGGAIITVASAAALAPL------------PDHYAYCTSK---AGLVMATKVLARELGPHGIRANSVCPTVV 204 (266)
T ss_dssp TSCEEEEEECCGGGTSCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEESCB
T ss_pred CCCeEEEEEcchhhccCC------------CCChHHHHHH---HHHHHHHHHHHHHHhhhCeEEEEEEeCCC
Confidence 2 3599999998876321 2237899999 6678888888766 4788888887653
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.60 E-value=1.3e-06 Score=85.89 Aligned_cols=117 Identities=14% Similarity=0.110 Sum_probs=85.7
Q ss_pred CceeEEEeecCChhhHHHHhhcC-CccEEEEcccccCcccc----ccChHHHHHHHHHHHHHHHHHHH----HcCCCEEE
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-DIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMK----SHGVYQLV 322 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~~~----~~~~~r~v 322 (600)
..+.++.+|+++.+.+.++++.. ++|++||+|+....... .++....+++|+.++.++.+++. +.+..++|
T Consensus 61 ~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv 140 (267)
T 3t4x_A 61 AILQPVVADLGTEQGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVI 140 (267)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred ceEEEEecCCCCHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEE
Confidence 45788999999999999988765 68999999997643322 23445568999999877766654 34557999
Q ss_pred EecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhC---CCCeeEeecc
Q psy16545 323 FSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTG---NKPVPYIFYN 383 (600)
Q Consensus 323 ~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~---~~~~~~r~~~ 383 (600)
++||.+.+... +....|+.|| ...+.+.+.++.+.+ +++..+.|+.
T Consensus 141 ~isS~~~~~~~------------~~~~~Y~asK---aa~~~l~~~la~e~~~~gi~vn~v~PG~ 189 (267)
T 3t4x_A 141 FIASEAAIMPS------------QEMAHYSATK---TMQLSLSRSLAELTTGTNVTVNTIMPGS 189 (267)
T ss_dssp EECCGGGTSCC------------TTCHHHHHHH---HHHHHHHHHHHHHTTTSEEEEEEEEECC
T ss_pred EEcchhhccCC------------CcchHHHHHH---HHHHHHHHHHHHHhCCCCeEEEEEeCCe
Confidence 99998776321 2247899999 678889998887653 5555555543
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=98.60 E-value=2.4e-07 Score=91.47 Aligned_cols=119 Identities=11% Similarity=-0.008 Sum_probs=89.6
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+.++.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++.. .+
T Consensus 78 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 157 (271)
T 4iin_A 78 GYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR 157 (271)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC
Confidence 567899999999999988887653 7999999999864332 2345567889999999988887754 35
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
..++|++||.+.+... +....|+.|| ...+.+++.++.+ .++++..++|+.+
T Consensus 158 ~g~iv~isS~~~~~~~------------~~~~~Y~asK---~a~~~~~~~la~e~~~~gi~v~~v~PG~v 212 (271)
T 4iin_A 158 FGSVVNVASIIGERGN------------MGQTNYSASK---GGMIAMSKSFAYEGALRNIRFNSVTPGFI 212 (271)
T ss_dssp CEEEEEECCHHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHHTTTEEEEEEEECSB
T ss_pred CCEEEEEechhhcCCC------------CCchHhHHHH---HHHHHHHHHHHHHHHHhCcEEEEEEeCcc
Confidence 6799999997765321 2237899999 6688888888876 4677777776543
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=4.2e-07 Score=89.42 Aligned_cols=119 Identities=11% Similarity=0.009 Sum_probs=89.6
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH-----Hc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK-----SH 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~-----~~ 316 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++. +.
T Consensus 75 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 154 (267)
T 4iiu_A 75 GGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGAR 154 (267)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 457899999999999988877653 7899999999764322 334567789999999999999874 44
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+..++|++||.+.+... +....|+.|| ...+.+.+.++.+. ++++..++|+.+
T Consensus 155 ~~g~iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~~~~~la~e~~~~gi~v~~v~PG~v 210 (267)
T 4iiu_A 155 QGGRIITLSSVSGVMGN------------RGQVNYSAAK---AGIIGATKALAIELAKRKITVNCIAPGLI 210 (267)
T ss_dssp SCEEEEEECCHHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CCcEEEEEcchHhccCC------------CCCchhHHHH---HHHHHHHHHHHHHHhhcCeEEEEEEEeee
Confidence 55799999997665321 2237899999 65677777777654 778888887654
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.59 E-value=2.5e-07 Score=91.16 Aligned_cols=117 Identities=13% Similarity=0.093 Sum_probs=88.4
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCCC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVY 319 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~ 319 (600)
.+.++.+|+++.+++.++++.. ++|++||+|+...... ..++....+++|+.++.++++++.. .+..
T Consensus 54 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g 133 (269)
T 3vtz_A 54 VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHG 133 (269)
T ss_dssp SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC
Confidence 4577889999999988887653 7999999999754332 2234456788999999999988764 3567
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh--CCCCeeEeeccc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT--GNKPVPYIFYNL 384 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~--~~~~~~~r~~~~ 384 (600)
++|++||.+.|... +....|+.|| ...+.+.+.++.+. ++++..++|+.+
T Consensus 134 ~iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~l~~~la~e~~~~i~vn~v~PG~v 185 (269)
T 3vtz_A 134 SIINIASVQSYAAT------------KNAAAYVTSK---HALLGLTRSVAIDYAPKIRCNAVCPGTI 185 (269)
T ss_dssp EEEEECCGGGTSBC------------TTCHHHHHHH---HHHHHHHHHHHHHHTTTEEEEEEEECSB
T ss_pred EEEEECchhhccCC------------CCChhHHHHH---HHHHHHHHHHHHHhcCCCEEEEEEECCC
Confidence 99999998887532 2237899999 67889999888776 566667776553
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.58 E-value=1.3e-07 Score=103.99 Aligned_cols=141 Identities=17% Similarity=0.126 Sum_probs=98.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------------cccc-cChHHhhhHHhhhhccccccc-CC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------------EGDI-VSMYANTDLAQKELGWSARCT-HD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------~~Dl-~~~~~~~~~~~~~~~~~~~~~-~~ 66 (600)
-|||+++-+|+.++.. +...+.+++..|++ .+|+ .+. .+++++ +.+. .+
T Consensus 326 lVTGas~GIG~a~A~~--la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~---~~~~~~-----~~~~~G~ 395 (604)
T 2et6_A 326 LITGAGAGLGKEYAKW--FAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDS---EAIIKN-----VIDKYGT 395 (604)
T ss_dssp EESSCSSHHHHHHHHH--HHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHH---HHHHHH-----HHHHHSC
T ss_pred EEECcchHHHHHHHHH--HHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHH---HHHHHH-----HHHhcCC
Confidence 4899999999999663 33344555544432 2344 332 222222 3322 26
Q ss_pred CCEEEEcCcccCcc----cCCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccc-cCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTV-YGEPQFLPITEDHPTGN 137 (600)
Q Consensus 67 ~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~v-yg~~~~~~~~E~~~~~~ 137 (600)
+|++|||||..... ...+++...+++|+.|+.++.+++. +.+-.++|++||... ++. .
T Consensus 396 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~-------------~ 462 (604)
T 2et6_A 396 IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN-------------F 462 (604)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC-------------T
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC-------------C
Confidence 99999999986432 1234567799999999999998863 344469999999743 332 3
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecc
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYF 171 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~ 171 (600)
....|+.||.+...+++.++.+. .|++++.+.||
T Consensus 463 ~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG 498 (604)
T 2et6_A 463 GQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH 498 (604)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred CChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCC
Confidence 45789999999999999998875 38999999998
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.58 E-value=1.7e-07 Score=93.03 Aligned_cols=120 Identities=13% Similarity=0.036 Sum_probs=90.5
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCc-----cccccChHHHHHHHHHHHHHHHHHHHH----c
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAV-----GESMQEPLMYYKNNLIATINLLEVMKS----H 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~----~ 316 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+.... ..+.++....+++|+.++.++++++.. .
T Consensus 56 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 135 (280)
T 3tox_A 56 GGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAAL 135 (280)
T ss_dssp TCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 456889999999999988877642 68999999996532 123345677899999999999998764 3
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+..++|++||...+... .+....|+.|| ...+.+.+.++.+. ++++..++|+.+
T Consensus 136 ~~g~iv~isS~~~~~~~-----------~~~~~~Y~asK---aa~~~l~~~la~e~~~~gIrvn~v~PG~v 192 (280)
T 3tox_A 136 GGGSLTFTSSFVGHTAG-----------FAGVAPYAASK---AGLIGLVQALAVELGARGIRVNALLPGGT 192 (280)
T ss_dssp TCEEEEEECCSBTTTBC-----------CTTCHHHHHHH---HHHHHHHHHHHHHHHTTTEEEEEEEECSB
T ss_pred CCCEEEEEcChhhCcCC-----------CCCchhHHHHH---HHHHHHHHHHHHHhhhcCeEEEEEEECCC
Confidence 45699999998776211 12237899999 66788888888764 788888887653
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.56 E-value=3.3e-07 Score=87.60 Aligned_cols=110 Identities=7% Similarity=-0.060 Sum_probs=83.6
Q ss_pred eecCChhhHHHHhhcC-CccEEEEcccccCcc-----ccccChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEecCcccc
Q psy16545 259 CDLVDKNRLGEIFAKH-DIDCVIHFAAVKAVG-----ESMQEPLMYYKNNLIATINLLEVMKSHG--VYQLVFSSSCTVY 330 (600)
Q Consensus 259 ~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~--~~r~v~~SS~~vY 330 (600)
+|+++++++.++++.. ++|++||+|+..... ...++....+++|+.++.++++++...- -.++|++||.+.+
T Consensus 42 ~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~ 121 (223)
T 3uce_A 42 LDISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSR 121 (223)
T ss_dssp CCTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGT
T ss_pred cCCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhc
Confidence 7999999999988764 689999999975221 2334556778999999999999998752 2489999998776
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhC-CCCeeEeecc
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTG-NKPVPYIFYN 383 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~-~~~~~~r~~~ 383 (600)
... +....|+.+| ...+.+.+.++.+.+ +++..++|+.
T Consensus 122 ~~~------------~~~~~Y~asK---~a~~~~~~~la~e~~~i~vn~v~PG~ 160 (223)
T 3uce_A 122 KVV------------ANTYVKAAIN---AAIEATTKVLAKELAPIRVNAISPGL 160 (223)
T ss_dssp SCC------------TTCHHHHHHH---HHHHHHHHHHHHHHTTSEEEEEEECS
T ss_pred cCC------------CCchHHHHHH---HHHHHHHHHHHHhhcCcEEEEEEeCC
Confidence 431 2237899999 678899999988765 6666666654
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=98.56 E-value=9.3e-08 Score=108.34 Aligned_cols=146 Identities=18% Similarity=0.195 Sum_probs=107.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCc-cEEecccc------------------------cccccChHHhhhHHhhhhccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPV-PYIVEARR------------------------EGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~-~~~~~~~~------------------------~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
-|||++|.+|+.+++.... ..+. +++.++|+ .+|++|.+++.+++++ +.
T Consensus 534 lItGg~~GlG~aiA~~la~-~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~-----~~ 607 (795)
T 3slk_A 534 LVTGGTGALGAEVARHLVI-ERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLAS-----IP 607 (795)
T ss_dssp EEETTTSHHHHHHHHHHHH-TSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT-----SC
T ss_pred eeccCCCCcHHHHHHHHHH-HcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH-----HH
Confidence 5899999999988664320 2222 13333332 6899999999997665 54
Q ss_pred ccCCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccc-cCCCCCCCCCCCCCCCC
Q psy16545 63 CTHDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV-YGEPQFLPITEDHPTGN 137 (600)
Q Consensus 63 ~~~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~v-yg~~~~~~~~E~~~~~~ 137 (600)
+...+|+||||||...... +.+++...+++|+.|+.+|.+++.. .. +||++||... .|. .
T Consensus 608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~-------------~ 672 (795)
T 3slk_A 608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLGS-------------G 672 (795)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHTC-------------S
T ss_pred HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCCC-------------C
Confidence 4447999999999874322 2355677999999999999999833 34 8999999754 343 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGA 176 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~ 176 (600)
..+.|+.||...+.+.+++... |++++.+.||.+-.+
T Consensus 673 g~~~YaAaka~~~alA~~~~~~--Gi~v~sI~pG~v~t~ 709 (795)
T 3slk_A 673 GQGNYAAANSFLDALAQQRQSR--GLPTRSLAWGPWAEH 709 (795)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHT--TCCEEEEEECCCSCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHc--CCeEEEEECCeECcc
Confidence 5688999999988888877654 899999999988765
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=5.4e-08 Score=98.88 Aligned_cols=118 Identities=11% Similarity=0.021 Sum_probs=89.9
Q ss_pred eecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEecCcc-cccCCCC
Q psy16545 259 CDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-VY-QLVFSSSCT-VYGEPQF 335 (600)
Q Consensus 259 ~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~-r~v~~SS~~-vYg~~~~ 335 (600)
+|+.+...+.+.++ ++|+|||+|+..... ..++...++.|+.++.++++++++++ ++ +++++|+.. +..
T Consensus 66 ~di~~~~~~~~a~~--~~D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~---- 137 (327)
T 1y7t_A 66 AGLEATDDPKVAFK--DADYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA---- 137 (327)
T ss_dssp EEEEEESCHHHHTT--TCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH----
T ss_pred CCeEeccChHHHhC--CCCEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH----
Confidence 67776666777777 899999999986432 46778899999999999999999986 65 888877743 111
Q ss_pred CCCC-CCC-CCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCc
Q psy16545 336 LPIT-EDH-PTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQG 389 (600)
Q Consensus 336 ~~~~-E~~-~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~ 389 (600)
++. |.. +..| .++|+.|| +..|+++..+++..+++.+.+|+++ +|+++.
T Consensus 138 -~~~~~~~~~~~p-~~~yg~tk---l~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 138 -LIAYKNAPGLNP-RNFTAMTR---LDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp -HHHHHTCTTSCG-GGEEECCH---HHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred -HHHHHHcCCCCh-hheeccch---HHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 111 222 2223 47899999 8889999999999999999999877 877654
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.54 E-value=3.8e-07 Score=90.43 Aligned_cols=117 Identities=17% Similarity=0.117 Sum_probs=89.6
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc--------ccccChHHHHHHHHHHHHHHHHHHHHc---
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG--------ESMQEPLMYYKNNLIATINLLEVMKSH--- 316 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~--------~~~~~~~~~~~~Nv~gt~~ll~~~~~~--- 316 (600)
++.++.+|+++.+++.++++.. ++|++||+|+..... .+.++....+++|+.++.++++++...
T Consensus 59 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 138 (280)
T 1xkq_A 59 QVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVA 138 (280)
T ss_dssp GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhc
Confidence 6889999999999888877642 689999999975322 123455678899999999999988753
Q ss_pred -CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 -GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 -~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+ .++|++||...+... .+....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 139 ~~-g~iv~isS~~~~~~~-----------~~~~~~Y~asK---~a~~~~~~~la~e~~~~gi~v~~v~PG~v 195 (280)
T 1xkq_A 139 SK-GEIVNVSSIVAGPQA-----------QPDFLYYAIAK---AALDQYTRSTAIDLAKFGIRVNSVSPGMV 195 (280)
T ss_dssp HT-CEEEEECCGGGSSSC-----------CCSSHHHHHHH---HHHHHHHHHHHHHHHTTTCEEEEEEECCB
T ss_pred CC-CcEEEecCccccCCC-----------CCcccHHHHHH---HHHHHHHHHHHHHhccCCeEEEEEeeCcC
Confidence 4 799999998776432 02236899999 6678888887754 5899999998764
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=5.7e-07 Score=89.16 Aligned_cols=117 Identities=12% Similarity=0.071 Sum_probs=90.0
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc---------ccccChHHHHHHHHHHHHHHHHHHHHc--
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG---------ESMQEPLMYYKNNLIATINLLEVMKSH-- 316 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~---------~~~~~~~~~~~~Nv~gt~~ll~~~~~~-- 316 (600)
.+.++.+|+++.+++.++++.. ++|++||+|+..... ...++....+++|+.++.++++++...
T Consensus 76 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 155 (280)
T 3nrc_A 76 PAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMK 155 (280)
T ss_dssp CSEEEECCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred CceEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4789999999999988887753 689999999976431 334455678999999999999998764
Q ss_pred -CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 -GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 -~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+..++|++||.+.+.. .+....|+.|| ...+.+.+.++.+ .++++..++|+.+
T Consensus 156 ~~~g~iv~isS~~~~~~------------~~~~~~Y~asK---aal~~~~~~la~e~~~~gi~v~~v~PG~v 212 (280)
T 3nrc_A 156 NRNASMVALTYIGAEKA------------MPSYNTMGVAK---ASLEATVRYTALALGEDGIKVNAVSAGPI 212 (280)
T ss_dssp TTTCEEEEEECGGGTSC------------CTTTHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECCC
T ss_pred cCCCeEEEEeccccccC------------CCCchhhHHHH---HHHHHHHHHHHHHHHHcCcEEEEEeeccc
Confidence 3469999999876632 12247899999 6678888877765 5788888887654
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.53 E-value=3.8e-07 Score=89.62 Aligned_cols=122 Identities=11% Similarity=0.024 Sum_probs=92.9
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-------CccEEEEcccccC-----ccccccChHHHHHHHHHHHHHHHHHHHHc--
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-------DIDCVIHFAAVKA-----VGESMQEPLMYYKNNLIATINLLEVMKSH-- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-------~~d~VihlAa~~~-----~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-- 316 (600)
+.++.++.+|+++.+++.++++.. ++|+|||+|+... .....++....+++|+.++.++++++...
T Consensus 71 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 150 (267)
T 1sny_A 71 HSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLK 150 (267)
T ss_dssp CTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHh
Confidence 457899999999999988887643 6899999999754 11233455678899999999999988654
Q ss_pred --------C-----CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEe
Q psy16545 317 --------G-----VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYI 380 (600)
Q Consensus 317 --------~-----~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r 380 (600)
+ ..+||++||...+.... + .+....|+.+| ...+.+++.++.+ ++++++.+|
T Consensus 151 ~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------~-~~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~ 218 (267)
T 1sny_A 151 KAAKANESQPMGVGRAAIINMSSILGSIQGN--------T-DGGMYAYRTSK---SALNAATKSLSVDLYPQRIMCVSLH 218 (267)
T ss_dssp HHHHHTTTSCSSTTTCEEEEECCGGGCSTTC--------C-SCCCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEC
T ss_pred hcccccccccccCCCceEEEEecccccccCC--------C-CCCchHHHHHH---HHHHHHHHHHHHHhhcCCcEEEEeC
Confidence 2 46999999988775321 0 11236899999 6678888888766 589999999
Q ss_pred eccc
Q psy16545 381 FYNL 384 (600)
Q Consensus 381 ~~~~ 384 (600)
|+.+
T Consensus 219 Pg~v 222 (267)
T 1sny_A 219 PGWV 222 (267)
T ss_dssp CCSB
T ss_pred Ccce
Confidence 8764
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=98.53 E-value=1.7e-06 Score=85.19 Aligned_cols=120 Identities=14% Similarity=0.089 Sum_probs=91.5
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHcCC--C
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSHGV--Y 319 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~~~--~ 319 (600)
+.++.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++...-. .
T Consensus 67 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g 146 (270)
T 3is3_A 67 GSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGG 146 (270)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTC
T ss_pred CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCC
Confidence 567899999999999998887753 6899999999764332 3345667899999999999999987633 4
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
++|++||...... + .+....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 147 ~iv~isS~~~~~~----------~-~~~~~~Y~asK---aa~~~~~~~la~e~~~~gi~vn~v~PG~v 200 (270)
T 3is3_A 147 RIVLTSSNTSKDF----------S-VPKHSLYSGSK---GAVDSFVRIFSKDCGDKKITVNAVAPGGT 200 (270)
T ss_dssp EEEEECCTTTTTC----------C-CTTCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECSB
T ss_pred eEEEEeCchhccC----------C-CCCCchhHHHH---HHHHHHHHHHHHHhcccCeEEEEEEeCCc
Confidence 9999999652210 1 12247899999 6678888888866 4788888887654
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.53 E-value=2.8e-07 Score=90.92 Aligned_cols=119 Identities=15% Similarity=0.117 Sum_probs=89.8
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++... +
T Consensus 74 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 153 (271)
T 4ibo_A 74 GHDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG 153 (271)
T ss_dssp TCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 557889999999999988887753 6899999999754322 33455678999999999998776643 5
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
..++|++||.+.+... +....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 154 ~g~iV~isS~~~~~~~------------~~~~~Y~asK---aa~~~l~~~la~e~~~~gI~vn~v~PG~v 208 (271)
T 4ibo_A 154 YGKIVNIGSLTSELAR------------ATVAPYTVAK---GGIKMLTRAMAAEWAQYGIQANAIGPGYM 208 (271)
T ss_dssp CEEEEEECCGGGTSBC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred CcEEEEEccHHhCCCC------------CCchhHHHHH---HHHHHHHHHHHHHHhhhCeEEEEEEeccE
Confidence 5799999997654321 2237899999 6678888888766 5778878877653
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.52 E-value=5.2e-07 Score=89.28 Aligned_cols=117 Identities=9% Similarity=0.009 Sum_probs=87.5
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHH----cCC-
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HGV- 318 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~- 318 (600)
++.++.+|+++.+++.++++.. ++|++||+|+..... ...++....+++|+.++.++++++.. .+.
T Consensus 78 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~ 157 (276)
T 2b4q_A 78 DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASA 157 (276)
T ss_dssp CEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCS
T ss_pred ceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCC
Confidence 6788899999999888877642 689999999975432 22345567899999999888887653 343
Q ss_pred ---CEEEEecCcccccCCCCCCCCCCCCCCCCCc-ccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 319 ---YQLVFSSSCTVYGEPQFLPITEDHPTGNIKN-FYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 319 ---~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~-~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+++|++||.+.+... +... .|+.|| ...+.+.+.++.+ .++++..++|+.+
T Consensus 158 ~~~g~iV~isS~~~~~~~------------~~~~~~Y~asK---~a~~~~~~~la~e~~~~gI~vn~v~PG~v 215 (276)
T 2b4q_A 158 ENPARVINIGSVAGISAM------------GEQAYAYGPSK---AALHQLSRMLAKELVGEHINVNVIAPGRF 215 (276)
T ss_dssp SSCEEEEEECCGGGTCCC------------CCSCTTHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCC
T ss_pred CCCCEEEEECCHHHcCCC------------CCCccccHHHH---HHHHHHHHHHHHHhcccCeEEEEEEeccC
Confidence 799999998876431 1124 799999 6678888888765 4788888887654
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.52 E-value=8e-07 Score=87.10 Aligned_cols=116 Identities=10% Similarity=-0.034 Sum_probs=86.9
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc---cccChHHHHHHHHHHHHHHHHHHHH----cCCCE
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE---SMQEPLMYYKNNLIATINLLEVMKS----HGVYQ 320 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~---~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~r 320 (600)
++.++.+|+++.+++.++++.. ++|++||+|+...... ..++....+++|+.++.++++++.. .+..+
T Consensus 72 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~ 151 (260)
T 3gem_A 72 GAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVAD 151 (260)
T ss_dssp TCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCE
T ss_pred CCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 4789999999999988877652 6899999999754332 2233456889999999999988864 35579
Q ss_pred EEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhC--CCCeeEeecc
Q psy16545 321 LVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTG--NKPVPYIFYN 383 (600)
Q Consensus 321 ~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~--~~~~~~r~~~ 383 (600)
+|++||.+.+... +....|+.|| ...+.+.+.++.+.+ +++..++|+.
T Consensus 152 iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~l~~~la~e~~~~Irvn~v~PG~ 201 (260)
T 3gem_A 152 IVHISDDVTRKGS------------SKHIAYCATK---AGLESLTLSFAARFAPLVKVNGIAPAL 201 (260)
T ss_dssp EEEECCGGGGTCC------------SSCHHHHHHH---HHHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred EEEECChhhcCCC------------CCcHhHHHHH---HHHHHHHHHHHHHHCCCCEEEEEeecc
Confidence 9999998766421 2237899999 668888888887764 6666666654
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=2.3e-07 Score=91.95 Aligned_cols=120 Identities=13% Similarity=0.002 Sum_probs=90.6
Q ss_pred hCCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHH----c
Q psy16545 250 TGKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----H 316 (600)
Q Consensus 250 ~~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~----~ 316 (600)
.+..+.++.+|+++.+++.++++.. ++|++||+|+..... .+.++....+++|+.++.++++++.. .
T Consensus 75 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 154 (277)
T 4fc7_A 75 TGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRD 154 (277)
T ss_dssp HSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH
T ss_pred cCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 4677899999999999988877653 789999999964322 23345667899999999999998853 3
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+..++|++||...+... +....|+.|| ...+.+.+.++.+. ++++..++|+.+
T Consensus 155 ~~g~iv~isS~~~~~~~------------~~~~~Y~asK---aa~~~l~~~la~e~~~~gi~vn~v~PG~v 210 (277)
T 4fc7_A 155 HGGVIVNITATLGNRGQ------------ALQVHAGSAK---AAVDAMTRHLAVEWGPQNIRVNSLAPGPI 210 (277)
T ss_dssp HCEEEEEECCSHHHHTC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred CCCEEEEECchhhCCCC------------CCcHHHHHHH---HHHHHHHHHHHHHhhhcCeEEEEEEECCE
Confidence 34699999998765321 1237899999 66788888887664 788888887653
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.52 E-value=3.4e-07 Score=88.73 Aligned_cols=119 Identities=16% Similarity=0.163 Sum_probs=91.3
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..+.++.+|+++++++.++++. .++|+|||+|+..... .+.++....++.|+.++.++++++.. .+
T Consensus 57 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 136 (244)
T 2bd0_A 57 GALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH 136 (244)
T ss_dssp TCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCeeeEEEecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC
Confidence 45688999999999988887764 2689999999975432 13345667889999999999998753 35
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.+++|++||...|... +....|+.|| ...+.+++.++.. ++++++.+||+.+
T Consensus 137 ~~~iv~isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 191 (244)
T 2bd0_A 137 SGHIFFITSVAATKAF------------RHSSIYCMSK---FGQRGLVETMRLYARKCNVRITDVQPGAV 191 (244)
T ss_dssp CEEEEEECCGGGTSCC------------TTCHHHHHHH---HHHHHHHHHHHHHHTTTTEEEEEEEECCB
T ss_pred CCEEEEEecchhcCCC------------CCCchhHHHH---HHHHHHHHHHHHHhhccCcEEEEEECCCc
Confidence 6799999998877421 2237899999 6678888777654 5788999998763
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=9.6e-08 Score=91.14 Aligned_cols=108 Identities=12% Similarity=0.068 Sum_probs=82.0
Q ss_pred hCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccc
Q psy16545 250 TGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 329 (600)
Q Consensus 250 ~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~v 329 (600)
.+.+++++.+|+.+.+++.++++ ++|+|||+|+.. |+. +.++++++++.+++|||++||..+
T Consensus 50 ~~~~~~~~~~D~~d~~~~~~~~~--~~d~vv~~ag~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~ 111 (221)
T 3r6d_A 50 DHERVTVIEGSFQNPGXLEQAVT--NAEVVFVGAMES---------------GSD-MASIVKALSRXNIRRVIGVSMAGL 111 (221)
T ss_dssp TSTTEEEEECCTTCHHHHHHHHT--TCSEEEESCCCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTT
T ss_pred CCCceEEEECCCCCHHHHHHHHc--CCCEEEEcCCCC---------------Chh-HHHHHHHHHhcCCCeEEEEeecee
Confidence 35678999999999999999998 889999999852 344 899999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeeccc
Q psy16545 330 YGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL 384 (600)
Q Consensus 330 Yg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~ 384 (600)
|+........+..+ ...+.|+.+| ...|.+++ ..+++++++||+.+
T Consensus 112 ~~~~~~~~~~~~~~--~~~~~y~~~K---~~~e~~~~----~~~i~~~~vrpg~v 157 (221)
T 3r6d_A 112 SGEFPVALEKWTFD--NLPISYVQGE---RQARNVLR----ESNLNYTILRLTWL 157 (221)
T ss_dssp TSCSCHHHHHHHHH--TSCHHHHHHH---HHHHHHHH----HSCSEEEEEEECEE
T ss_pred cCCCCccccccccc--ccccHHHHHH---HHHHHHHH----hCCCCEEEEechhh
Confidence 97532110000000 1112799999 66777665 46999999998764
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.51 E-value=4.3e-07 Score=89.01 Aligned_cols=119 Identities=13% Similarity=0.026 Sum_probs=87.3
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc-----cccChHHHHHHHHHHHHHHHHHHHHcCC--
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKSHGV-- 318 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-- 318 (600)
+..+.++.+|+++.+++.++++.. ++|++||+|+...... +.++....+++|+.++.++++++...-.
T Consensus 57 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 136 (259)
T 3edm_A 57 GRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKG 136 (259)
T ss_dssp TSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 456889999999999988887653 6899999998652222 2233467789999999999999987632
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhC--CCCeeEeecc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTG--NKPVPYIFYN 383 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~--~~~~~~r~~~ 383 (600)
.++|++||.+.+... .+....|+.|| ...+.+.+.++.+.+ +++..+.|+.
T Consensus 137 g~iv~isS~~~~~~~-----------~~~~~~Y~asK---aa~~~l~~~la~e~~~~I~vn~v~PG~ 189 (259)
T 3edm_A 137 GAIVTFSSQAGRDGG-----------GPGALAYATSK---GAVMTFTRGLAKEVGPKIRVNAVCPGM 189 (259)
T ss_dssp EEEEEECCHHHHHCC-----------STTCHHHHHHH---HHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CEEEEEcCHHhccCC-----------CCCcHHHHHHH---HHHHHHHHHHHHHHCCCCEEEEEEECC
Confidence 489999998776211 12236899999 678889988887765 4444555443
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=98.51 E-value=3.4e-07 Score=88.98 Aligned_cols=113 Identities=12% Similarity=0.120 Sum_probs=83.0
Q ss_pred EEeecCChhhHHHHhhcC-----CccEEEEcccccCcc----ccccChHHHHHHHHHHHHHHHHHHHH----cCCCEEEE
Q psy16545 257 YSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVG----ESMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVF 323 (600)
Q Consensus 257 i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~r~v~ 323 (600)
+.+|+++.+++.++++.. ++|++||+|+..... .+.++....+++|+.++.++++++.. .+..++|+
T Consensus 58 ~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~ 137 (247)
T 1uzm_A 58 VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIF 137 (247)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred eeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 789999999888877642 689999999975421 23345677899999999999998764 45679999
Q ss_pred ecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 324 SSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 324 ~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+||...+... +....|+.|| ...+.+.+.++.+ +++++..++|+.+
T Consensus 138 isS~~~~~~~------------~~~~~Y~~sK---~a~~~~~~~la~e~~~~gi~v~~v~PG~v 186 (247)
T 1uzm_A 138 IGSVSGLWGI------------GNQANYAASK---AGVIGMARSIARELSKANVTANVVAPGYI 186 (247)
T ss_dssp ECCCCC-----------------CCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred ECCHhhccCC------------CCChhHHHHH---HHHHHHHHHHHHHhhhcCcEEEEEEeCCC
Confidence 9997654211 1236899999 6678888877765 4788888887654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 600 | ||||
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 3e-36 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 1e-27 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 8e-09 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 9e-31 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 1e-30 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 2e-06 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 1e-30 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 2e-25 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 3e-06 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 1e-05 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 6e-27 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 4e-20 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 2e-10 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 7e-26 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 3e-15 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 2e-10 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 3e-10 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 4e-25 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 5e-25 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-05 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-04 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 1e-24 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 1e-17 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 1e-23 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 2e-19 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-21 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-15 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-05 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 8e-05 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 7e-21 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 6e-13 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 4e-04 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 0.001 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 6e-17 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 5e-10 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 1e-06 | |
| d1gy8a_ | 383 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 2e-12 | |
| d1gy8a_ | 383 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 9e-12 | |
| d1gy8a_ | 383 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 4e-05 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 3e-12 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 2e-06 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 0.001 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 0.002 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 6e-12 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 0.002 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 5e-09 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 1e-05 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 4e-05 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 4e-08 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 1e-06 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 4e-05 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 2e-04 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 4e-04 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 0.004 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 0.002 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 0.002 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 0.004 |
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 136 bits (342), Expect = 3e-36
Identities = 87/171 (50%), Positives = 114/171 (66%)
Query: 51 DLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 110
D+ + L H ID VIHFA +KAVGES+Q+PL YY NN+ T+ L+ M++ V
Sbjct: 58 DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 111 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRY 170
+FSSS TVYG+ +P E PTG ++ YGK+K +E++L DL KA +W+I LRY
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRY 177
Query: 171 FNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGT 221
FNPVGAHPSG +GEDP N+MPY+AQVA+G + +FG DY TEDGT
Sbjct: 178 FNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT 228
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 111 bits (278), Expect = 1e-27
Identities = 97/371 (26%), Positives = 139/371 (37%), Gaps = 77/371 (20%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHF 282
V+ +DN NS + IE+ GK F D+ ++ + EI H ID VIHF
Sbjct: 26 DVIILDNLCNS-----KRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80
Query: 283 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDH 342
A +KAVGES+Q+PL YY NN+ T+ L+ M++ V +FSSS TVYG+ +P E
Sbjct: 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESF 140
Query: 343 PTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERV 402
PTG ++ Y V I +L Q + LLR F
Sbjct: 141 PTGTPQSPYGK-------------------SKLMVEQILTDLQKAQPDWSIALLRYF--- 178
Query: 403 TGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFER 462
N + ++G + + +PYI G+ S+ +
Sbjct: 179 --NPVGAHPSGDMGEDP-----------QGIPNNLMPYIAQVA-VGRRDSLAIFGNDYPT 224
Query: 463 VTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFER 522
G V + + YNLG G G SVL ++ F +
Sbjct: 225 EDGTGVRDYIH------VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSK 278
Query: 523 VTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQR 582
GKPV Y F RREGD+ + +A+ A R
Sbjct: 279 ACGKPVNYHF------------------------------APRREGDLPAYWADASKADR 308
Query: 583 ELGWSARCTVK 593
EL W T+
Sbjct: 309 ELNWRVTRTLD 319
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 55.4 bits (132), Expect = 8e-09
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 1 MINKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWS 60
YNLG G G SVL ++ F + GKPV Y RREGD+ + +A+ A +EL W
Sbjct: 254 PGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWR 313
Query: 61 AR 62
Sbjct: 314 VT 315
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 121 bits (304), Expect = 9e-31
Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 12/174 (6%)
Query: 51 DLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 110
DL+ D V + A+ V S + P + + T+ LLE ++ G+
Sbjct: 63 DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122
Query: 111 Q---LVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIIS 167
+ +S+ +YG Q +P E P ++ Y K + + + +++ +
Sbjct: 123 KKTRFYQASTSELYGLVQEIPQKETTPF-YPRSPYAVAKLYAYWITVNYRESYG-MYACN 180
Query: 168 LRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGT 221
FN H S R GE I +A +A G G D
Sbjct: 181 GILFN----HESPRRGETF--VTRKITRAIANIAQG-LESCLYLGNMDSLRDWG 227
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 120 bits (302), Expect = 1e-30
Identities = 43/262 (16%), Positives = 85/262 (32%), Gaps = 19/262 (7%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHF 282
+V I +S + I K + DL D + L I + D V +
Sbjct: 27 EVHGIKRRASSFNTERVD-HIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNL 85
Query: 283 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQ---LVFSSSCTVYGEPQFLPIT 339
A+ V S + P + + T+ LLE ++ G+ + +S+ +YG Q +P
Sbjct: 86 GAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQK 145
Query: 340 EDHPTGNIKNFYNLGTGQGTSVL---QLLRTFERVTGNKPVPYIFYNL-GTGQGTSVL-- 393
E P ++ Y + L + + G I +N +G + +
Sbjct: 146 ETTPF-YPRSPY------AVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTR 198
Query: 394 QLLRTFERVTGNKPVPYIFYNL-GTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTS 452
++ R + N+ ++ + + P + + TG S
Sbjct: 199 KITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQPED-FVIATGVQYS 257
Query: 453 VLQLLRTFERVTGKPVPYIFYN 474
V Q + G + +
Sbjct: 258 VRQFVEMAAAQLGIKLRFEGTG 279
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 47.9 bits (113), Expect = 2e-06
Identities = 15/92 (16%), Positives = 30/92 (32%), Gaps = 1/92 (1%)
Query: 503 YNLGTGQGTSVLQLLRTFERVTGKPVPYIF-YNLGTGQGTSVLQLLRTFERVTGKPVPYI 561
+ + TG SV Q + G + + G SV + +
Sbjct: 248 FVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVD 307
Query: 562 VEARREGDIVSMYANTDLAQRELGWSARCTVK 593
R ++ ++ + A +LGW T++
Sbjct: 308 PRYFRPAEVETLLGDPTKAHEKLGWKPEITLR 339
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (300), Expect = 1e-30
Identities = 43/207 (20%), Positives = 78/207 (37%), Gaps = 19/207 (9%)
Query: 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQ 125
++D + H A+ + M P+ K N I T+N+L + K G +L+ +S+ VYG+P+
Sbjct: 65 EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPE 123
Query: 126 FLPITEDHPTG----NIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGR 181
P +ED+ + Y + K E M K + R FN G
Sbjct: 124 VHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG-VEVRVARIFNTFGPRMHMN 182
Query: 182 IGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSVHIGDTPC 241
G ++ A+ +P TV+G+ +T + + VN +
Sbjct: 183 DG--------RVVSNFILQALQGEP-LTVYGSGSQTRA----FQYVSDLVNGLVALMNSN 229
Query: 242 SIRAIEQFTGKKVDFYSCDLVDKNRLG 268
+ ++ + KN +G
Sbjct: 230 VSSPVNLGNPEEHTILEFAQLIKNLVG 256
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (262), Expect = 2e-25
Identities = 47/256 (18%), Positives = 94/256 (36%), Gaps = 25/256 (9%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTG-KKVDFYSCDLVDKNRLGEIFAKHDIDCVIH 281
+V +DNF R +E + G + + + D+V+ ++D + H
Sbjct: 27 EVTVVDNFFTG--------RKRNVEHWIGHENFELINHDVVEP-------LYIEVDQIYH 71
Query: 282 FAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITED 341
A+ + M P+ K N I T+N+L + K G +L+ +S+ VYG+P+ P +ED
Sbjct: 72 LASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSED 130
Query: 342 HPTGNIKNFYNLGTGQGTSVL---QLLRTFERVTGNKPVPYIFYNL-GTGQGTSVLQLLR 397
+ N + + + G + +N G + +++
Sbjct: 131 YWGHV--NPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVS 188
Query: 398 TF-ERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQL 456
F + +P+ T V L+ + V NLG + ++L+
Sbjct: 189 NFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP-VNLGNPEEHTILEF 247
Query: 457 LRTFERVTGKPVPYIF 472
+ + + G F
Sbjct: 248 AQLIKNLVGSGSEIQF 263
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.0 bits (111), Expect = 3e-06
Identities = 13/94 (13%), Positives = 33/94 (35%), Gaps = 14/94 (14%)
Query: 1 MINKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWS 60
++ NLG + ++L+ + + + G + + D + A+ LGW
Sbjct: 229 NVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWE 288
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNL 94
++ E + + + Y++ L
Sbjct: 289 PV--VPLE------------EGLNKAIHYFRKEL 308
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.0 bits (106), Expect = 1e-05
Identities = 10/61 (16%), Positives = 23/61 (37%)
Query: 533 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTV 592
NLG + ++L+ + + + G + + D + A+ LGW +
Sbjct: 234 VNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPL 293
Query: 593 K 593
+
Sbjct: 294 E 294
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 110 bits (274), Expect = 6e-27
Identities = 87/176 (49%), Positives = 114/176 (64%), Gaps = 6/176 (3%)
Query: 51 DLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 110
DL ++ + ID VIHFA +KAVGES Q PL YY NN++ T+ LLE+M+ + V
Sbjct: 59 DLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVS 118
Query: 111 QLVFSSSCTVYGE----PQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKE-WNI 165
+ VFSSS TVYG+ P +PI E+ P G N YG TK+ IE +L DL + K+ W
Sbjct: 119 KFVFSSSATVYGDATRFPNMIPIPEECPLGPT-NPYGHTKYAIENILNDLYNSDKKSWKF 177
Query: 166 ISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGT 221
LRYFNP+GAHPSG IGEDP N++PY+AQVA+G + +FG DY++ DGT
Sbjct: 178 AILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGT 233
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 89.7 bits (221), Expect = 4e-20
Identities = 97/375 (25%), Positives = 146/375 (38%), Gaps = 77/375 (20%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHF 282
V DN NS T S+ +E T + FY DL D+ L ++F ++ ID VIHF
Sbjct: 27 DCVVADNLSNS-----TYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF 81
Query: 283 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGE----PQFLPI 338
A +KAVGES Q PL YY NN++ T+ LLE+M+ + V + VFSSS TVYG+ P +PI
Sbjct: 82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPI 141
Query: 339 TEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRT 398
E+ P G N Y G ++ + + K + G L+
Sbjct: 142 PEECPLGPT-NPY----GHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGE 196
Query: 399 FERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLR 458
N +PY+ V + YIF G + +R
Sbjct: 197 DPLGIPNNLLPYMAQVA-----------------VGRREKLYIF---GDDYDSRDGTPIR 236
Query: 459 TFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLR 518
+ V +I + E +NLG+G+G++V ++
Sbjct: 237 DYIHVVDLAKGHIAAL-------------QYLEAYNENEGLCREWNLGSGKGSTVFEVYH 283
Query: 519 TFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTD 578
F + +G +PY RR GD++++ A D
Sbjct: 284 AFCKASGIDLPYKV------------------------------TGRRAGDVLNLTAKPD 313
Query: 579 LAQRELGWSARCTVK 593
A+REL W V+
Sbjct: 314 RAKRELKWQTELQVE 328
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 60.1 bits (144), Expect = 2e-10
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 1 MINKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWS 60
+ + +NLG+G+G++V ++ F + +G +PY V RR GD++++ A D A++EL W
Sbjct: 263 GLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAKPDRAKRELKWQ 322
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNN 93
++ +S ++ + N
Sbjct: 323 TE--LQVE------------DSCKDLWKWTTEN 341
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (266), Expect = 7e-26
Identities = 113/283 (39%), Positives = 155/283 (54%), Gaps = 31/283 (10%)
Query: 47 YANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKS 106
+ D+ + + VIHFA +KAVGES+Q+PL YY+ NL TI LLE+MK+
Sbjct: 62 FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 121
Query: 107 HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNII 166
HGV LVFSSS TVYG PQ+LP+ E HPTG N YGK+K FIEEM++DL +A K WN +
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAV 181
Query: 167 SLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGK--- 223
LRYFNP GAH SG IGEDP N+MPY++QVAIG + VFG DY+TEDGTG
Sbjct: 182 LLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDY 241
Query: 224 VVAIDNFVNSVHIGDTPCS--------------------IRAIEQFTGKKVDFYSCDLVD 263
+ +D + ++A+E+ +GKK+ + V
Sbjct: 242 IHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYK----VV 297
Query: 264 KNRLGEIFAKH-DIDC---VIHFAAVKAVGESMQEPLMYYKNN 302
R G++ A + + + + A + ++ + K N
Sbjct: 298 ARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQN 340
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.1 bits (183), Expect = 3e-15
Identities = 99/274 (36%), Positives = 138/274 (50%), Gaps = 29/274 (10%)
Query: 223 KVVAIDNFVNSVH-IGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIH 281
V IDNF N+ G P S+R +++ TG+ V+F D++D+ L +F K+ VIH
Sbjct: 28 LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIH 87
Query: 282 FAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITED 341
FA +KAVGES+Q+PL YY+ NL TI LLE+MK+HGV LVFSSS TVYG PQ+LP+ E
Sbjct: 88 FAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEA 147
Query: 342 HPTGNIKNFYNLGTGQGTSVLQ------------LLRTFERVTGNKPVPYIFYNLGTGQG 389
HPTG N Y +++ LLR F TG + +G
Sbjct: 148 HPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYF-NPTG----AHASGCIGEDPQ 202
Query: 390 TSVLQLLRTFERV-TGNKPVPYIF---YNLGTGQGT-------SVLQLLRTFERVTGKPV 438
L+ +V G + +F Y+ G G + + R +
Sbjct: 203 GIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQC 262
Query: 439 PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 472
YNLGTG G SVLQ+++ E+ +GK +PY
Sbjct: 263 GCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV 296
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.5 bits (145), Expect = 2e-10
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 14/93 (15%)
Query: 1 MINKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWS 60
+ YNLGTG G SVLQ+++ E+ +GK +PY V ARREGD+ + YAN LAQ+ELGW+
Sbjct: 262 CGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWT 321
Query: 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNN 93
A +D ++ + K N
Sbjct: 322 AA--LGLD------------RMCEDLWRWQKQN 340
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.7 bits (143), Expect = 3e-10
Identities = 34/65 (52%), Positives = 44/65 (67%)
Query: 529 PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSA 588
YNLGTG G SVLQ+++ E+ +GK +PY V ARREGD+ + YAN LAQ ELGW+A
Sbjct: 263 GCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTA 322
Query: 589 RCTVK 593
+
Sbjct: 323 ALGLD 327
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 104 bits (261), Expect = 4e-25
Identities = 54/274 (19%), Positives = 92/274 (33%), Gaps = 31/274 (11%)
Query: 218 EDGTGKVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDID 277
++ VV ID + ++ S+ I + + +F D+ D + IF ++ D
Sbjct: 22 KNTQDTVVNIDKLTYAGNLE----SLSDISE--SNRYNFEHADICDSAEITRIFEQYQPD 75
Query: 278 CVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV---------YQLVFSSSCT 328
V+H AA V S+ P + + N++ T LLEV + + ++ S+
Sbjct: 76 AVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE 135
Query: 329 VYGEPQFLPITEDHPTGNIKNFYNLGTGQ---GTSVL---QLLRTFERVTGNKPVPYIFY 382
VYG+ E+ T + S L+R + R G +
Sbjct: 136 VYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCS 195
Query: 383 NL-GTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGT----SVLQLLRTFERVTGKP 437
N G L + KP+P G G V R V +
Sbjct: 196 NNYGPYHFPEKL-IPLVILNALEGKPLPI----YGKGDQIRDWLYVEDHARALHMVVTEG 250
Query: 438 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYI 471
YN+G L ++ T + + VP
Sbjct: 251 KAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKA 284
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 104 bits (260), Expect = 5e-25
Identities = 32/180 (17%), Positives = 62/180 (34%), Gaps = 30/180 (16%)
Query: 51 DLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV- 109
D+ + D V+H AA V S+ P + + N++ T LLEV + +
Sbjct: 58 DICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA 117
Query: 110 --------YQLVFSSSCTVYGEPQF---------LPITEDHPTGNIKNVYGKTKHFIEEM 152
++ S+ VYG+ LP+ + + Y +K + +
Sbjct: 118 LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHL 177
Query: 153 LKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG 212
++ + + I N G P ++P + A+ KP ++G
Sbjct: 178 VRAWRRTYG-LPTIVTNCSNNYG----------PYHFPEKLIPLVILNALEGKP-LPIYG 225
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 45.1 bits (106), Expect = 1e-05
Identities = 33/153 (21%), Positives = 44/153 (28%), Gaps = 18/153 (11%)
Query: 455 QLLRTFERVTGKPV--PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGT- 511
L+R + R G P N G L L + GKP+P G G
Sbjct: 176 HLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPI----YGKGDQIR 231
Query: 512 ---SVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF--------ERVTGKPVPY 560
V R V + YN+G L ++ T + T
Sbjct: 232 DWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQI 291
Query: 561 IVEARREGDIVSMYANTDLAQRELGWSARCTVK 593
A R G + RELGW T +
Sbjct: 292 TYVADRPGHDRRYAIDAGKISRELGWKPLETFE 324
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 42.4 bits (99), Expect = 1e-04
Identities = 13/69 (18%), Positives = 20/69 (28%), Gaps = 8/69 (11%)
Query: 2 INKFYNLGTGQGTSVLQLLRTF--------ERVTGKPVPYIVEARREGDIVSMYANTDLA 53
+ YN+G L ++ T + T A R G +
Sbjct: 252 AGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKI 311
Query: 54 QKELGWSAR 62
+ELGW
Sbjct: 312 SRELGWKPL 320
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 102 bits (254), Expect = 1e-24
Identities = 25/204 (12%), Positives = 61/204 (29%), Gaps = 8/204 (3%)
Query: 43 IVSMYANTDLAQKELGWSARCTHDIDCVIHFA-AVKAVGESMQEPLMYYKNNLIATINLL 101
++ +L + ID V A V + + P + N++ N++
Sbjct: 31 VLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNII 90
Query: 102 EVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTG----NIKNVYGKTKHFIEEMLKDLS 157
+ V +L+F S +Y + P+ E Y K ++ + +
Sbjct: 91 HAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYN 150
Query: 158 KAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYET 217
+ + + S+ N G P + ++ + P V+G+
Sbjct: 151 RQYG-RDYRSVMPTNLYG--PHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPM 207
Query: 218 EDGTGKVVAIDNFVNSVHIGDTPC 241
+ ++ + +
Sbjct: 208 REFLHVDDMAAASIHVMELAHEVW 231
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 82.2 bits (202), Expect = 1e-17
Identities = 37/238 (15%), Positives = 71/238 (29%), Gaps = 20/238 (8%)
Query: 255 DFYSCDLVDKNRLGEIFAKHDIDCVIHFA-AVKAVGESMQEPLMYYKNNLIATINLLEVM 313
+L+D + + FA ID V A V + + P + N++ N++
Sbjct: 34 TRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAA 93
Query: 314 KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQG-TSVLQLLRTFERVT 372
+ V +L+F S +Y + P+ E N + ++L ++ R
Sbjct: 94 HQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY 153
Query: 373 GNKPV---------PYIFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSV 423
G P+ ++ L V + V
Sbjct: 154 GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHV 213
Query: 424 LQLLRTFERVTGKPVPYIF---------YNLGTGQGTSVLQLLRTFERVTGKPVPYIF 472
+ V N+GTG ++ +L +T +V G +F
Sbjct: 214 DDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVF 271
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (249), Expect = 1e-23
Identities = 23/147 (15%), Positives = 48/147 (32%), Gaps = 5/147 (3%)
Query: 51 DLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 110
DL + + A V S + + T+ LL+ +K+ G+
Sbjct: 64 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLI 123
Query: 111 Q---LVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIIS 167
+S+ +YG+ Q +P E P ++ YG K + ++ + +A+ ++
Sbjct: 124 NSVKFYQASTSELYGKVQEIPQKETTPF-YPRSPYGAAKLYAYWIVVNFREAYN-LFAVN 181
Query: 168 LRYFNPVGAHPSGRIGEDPTKSFTNIM 194
FN +
Sbjct: 182 GILFNHESPRRGANFVTRKISRSVAKI 208
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.7 bits (216), Expect = 2e-19
Identities = 25/132 (18%), Positives = 50/132 (37%), Gaps = 4/132 (3%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHF 282
+V I +S + G + + + + DL D L +I + + +
Sbjct: 27 EVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNL 86
Query: 283 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQ---LVFSSSCTVYGEPQFLPIT 339
A V S + + T+ LL+ +K+ G+ +S+ +YG+ Q +P
Sbjct: 87 GAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQK 146
Query: 340 EDHPTGNIKNFY 351
E P ++ Y
Sbjct: 147 ETTPF-YPRSPY 157
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 93.3 bits (231), Expect = 2e-21
Identities = 31/154 (20%), Positives = 58/154 (37%), Gaps = 13/154 (8%)
Query: 59 WSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSC 118
AR +D ++HFAA V S+ ++ + N+ T LL+ GV ++V S+
Sbjct: 69 LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTN 128
Query: 119 TVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHP 178
VYG TE P + Y +K + + + + + ++ R N G
Sbjct: 129 QVYGSIDSGSWTESSPL-EPNSPYAASKAGSDLVARAYHRTYG-LDVRITRCCNNYG--- 183
Query: 179 SGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG 212
P + ++P + ++G
Sbjct: 184 -------PYQHPEKLIPLFVTNLLDGGT-LPLYG 209
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 76.0 bits (186), Expect = 1e-15
Identities = 45/262 (17%), Positives = 77/262 (29%), Gaps = 28/262 (10%)
Query: 220 GTGKVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCV 279
+V+ +D+ + + ++ F D+ D +D +
Sbjct: 29 PADEVIVLDSLTYAGNR------ANLAPVDADPRLRFVHGDIRDAGL--LARELRGVDAI 80
Query: 280 IHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPIT 339
+HFAA V S+ ++ + N+ T LL+ GV ++V S+ VYG T
Sbjct: 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWT 140
Query: 340 EDHPTGNIKNFYNLGTGQGTSVL---QLLRTFERVTGNKPVPYIFYNL-GTGQGTSVLQL 395
E P + Y S + R + R G N G Q L +
Sbjct: 141 ESSPL-EPNSPY------AASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKL-I 192
Query: 396 LRTFERVTGNKPVPYIFYNLGTGQGT----SVLQLLRTFERVTGKPVPYIFYNLGTGQGT 451
+ +P G G R V Y++G G
Sbjct: 193 PLFVTNLLDGGTLPL----YGDGANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLEL 248
Query: 452 SVLQLLRTFERVTGKPVPYIFY 473
+ +L G +
Sbjct: 249 TNRELTGILLDSLGADWSSVRK 270
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 44.4 bits (104), Expect = 2e-05
Identities = 18/106 (16%), Positives = 33/106 (31%), Gaps = 9/106 (8%)
Query: 493 VTGKPVPYIFYNLGTGQGT----SVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLR 548
+ G +P G G R V Y++G G + +L
Sbjct: 200 LDGGTLPL----YGDGANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTG 255
Query: 549 TFERVTGKPVPYIVE-ARREGDIVSMYANTDLAQRELGWSARCTVK 593
G + + A R+G + + +RELG+ + +
Sbjct: 256 ILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFA 301
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 42.5 bits (99), Expect = 8e-05
Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 15/92 (16%)
Query: 3 NKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVE-ARREGDIVSMYANTDLAQKELGWSA 61
+ Y++G G + +L G + + A R+G + + ++ELG+
Sbjct: 237 GEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRP 296
Query: 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNN 93
+ + + + +Y+ N
Sbjct: 297 Q--VSFA------------DGLARTVRWYREN 314
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 91.9 bits (227), Expect = 7e-21
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 9/150 (6%)
Query: 63 CTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 122
+D V+H AA+ +V S+ +P+ N+ +N+L + V +++S + YG
Sbjct: 88 ACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYG 147
Query: 123 EPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRI 182
+ LP ED G + Y TK+ E S+ + ++ I LRYFN G
Sbjct: 148 DHPGLPKVEDTI-GKPLSPYAVTKYVNELYADVFSRCYG-FSTIGLRYFNVFGRR----- 200
Query: 183 GEDPTKSFTNIMPYLAQVAIGSKPHFTVFG 212
+DP ++ ++P I + G
Sbjct: 201 -QDPNGAYAAVIPKWTSSMIQGDD-VYING 228
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 68.1 bits (165), Expect = 6e-13
Identities = 45/250 (18%), Positives = 84/250 (33%), Gaps = 13/250 (5%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHF 282
KVV +DNF H + + + F D+ + + A +D V+H
Sbjct: 42 KVVGLDNFATG-HQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDC--NNACAGVDYVLHQ 98
Query: 283 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDH 342
AA+ +V S+ +P+ N+ +N+L + V +++S + YG+ LP ED
Sbjct: 99 AALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDT 158
Query: 343 PTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL----GTGQGTSVLQLLRT 398
G + Y + F R G + ++N+ G + +
Sbjct: 159 I-GKPLSPYAVTKYVNE---LYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKW 214
Query: 399 FERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERV--TGKPVPYIFYNLGTGQGTSVLQL 456
+ V + + ++ G YN+ G TS+ QL
Sbjct: 215 TSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQL 274
Query: 457 LRTFERVTGK 466
+
Sbjct: 275 FFALRDGLAE 284
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 40.3 bits (93), Expect = 4e-04
Identities = 20/99 (20%), Positives = 35/99 (35%), Gaps = 19/99 (19%)
Query: 1 MINKFYNLGTGQGTSVLQLLRTFERVTGK-----PVPYIVEARREGDIVSMYANTDLAQK 55
N+ YN+ G TS+ QL + + REGD+ A+ A K
Sbjct: 256 ARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAK 315
Query: 56 ELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNL 94
LG++ + +D+ + + +Y L
Sbjct: 316 LLGYAPK--YDVS------------AGVALAMPWYIMFL 340
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 39.2 bits (90), Expect = 0.001
Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 5/73 (6%)
Query: 526 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGK-----PVPYIVEARREGDIVSMYANTDLA 580
YN+ G TS+ QL + + REGD+ A+ A
Sbjct: 254 LDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKA 313
Query: 581 QRELGWSARCTVK 593
+ LG++ + V
Sbjct: 314 AKLLGYAPKYDVS 326
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 80.2 bits (196), Expect = 6e-17
Identities = 47/372 (12%), Positives = 92/372 (24%), Gaps = 73/372 (19%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHF 282
++ DN ++ + +F D+ +KN + + K+ D H
Sbjct: 26 DLIVFDNLSRKGATD----NLHWLSSL--GNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 79
Query: 283 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV-YQLVFSSSCTVYGEPQFLPITED 341
A A+ S+ P M ++ N+ T+NLLE ++ + +++SS+ VYG+ + E
Sbjct: 80 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNET 139
Query: 342 HPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFER 401
+ N ++
Sbjct: 140 ETRYTCVDKPN------------GYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTV 187
Query: 402 VTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFE 461
V + + QG + E G P+ G +R
Sbjct: 188 VFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQ--------VRDV- 238
Query: 462 RVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFE 521
+ V+ S+L+L + E
Sbjct: 239 ---------------LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLE 283
Query: 522 RVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQ 581
+ + RE D A+
Sbjct: 284 DYCNIDMRFTN------------------------------LPVRESDQRVFVADIKKIT 313
Query: 582 RELGWSARCTVK 593
+ WS + + K
Sbjct: 314 NAIDWSPKVSAK 325
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 59.0 bits (141), Expect = 5e-10
Identities = 31/185 (16%), Positives = 63/185 (34%), Gaps = 20/185 (10%)
Query: 51 DLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV- 109
D+ K + D H A A+ S+ P M ++ N+ T+NLLE ++ +
Sbjct: 57 DIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSN 116
Query: 110 YQLVFSSSCTVYGEPQFLPITEDHPTG---------------NIKNVYGKTKHFIEEMLK 154
+++SS+ VYG+ + E + + YG +K ++ +
Sbjct: 117 CNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYML 176
Query: 155 DLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGAD 214
D ++ ++ G + ++ G FT+ G
Sbjct: 177 DYARIFGLNTVVFRHSSMYGGRQFATYDQGW----VGWFCQKAVEIKNGINKPFTISGNG 232
Query: 215 YETED 219
+ D
Sbjct: 233 KQVRD 237
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 48.2 bits (113), Expect = 1e-06
Identities = 10/58 (17%), Positives = 18/58 (31%)
Query: 5 FYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62
S+L+L + E + + RE D A+ + WS +
Sbjct: 264 NIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPK 321
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Score = 67.1 bits (162), Expect = 2e-12
Identities = 89/408 (21%), Positives = 152/408 (37%), Gaps = 73/408 (17%)
Query: 202 IGSKPHFTVFGADYETEDGTGKVVAIDNFVNS----VHIGDTPCSIRAIEQFTG------ 251
IGS HF D VV +D+ V + H+ R ++Q G
Sbjct: 14 IGS--HF----VRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWA 67
Query: 252 -KKVDFYSCDLVDKNRLGEIFAKHD-IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINL 309
+ D+ +++ L +F +H ID V+H A AVGES+++PL YY NN++ + L
Sbjct: 68 DRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRL 127
Query: 310 LEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVL---QLLR 366
L+ M H +++FSSS ++G P ++ + +I + + G S L +++R
Sbjct: 128 LQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIR 187
Query: 367 TFERVTGNKPVPYIFYNL-GTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQ 425
G K + ++N G + + + + + +P I + +
Sbjct: 188 DCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHL-----IPIILGRV-MSDIAPDQR 241
Query: 426 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQ 485
L + T K +P + T GT V R + V
Sbjct: 242 LTIHEDASTDKRMPIFGTDYPTPDGTCV----RDY--------------------VHVCD 277
Query: 486 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQ 545
L + K + +NLGT +G SV +
Sbjct: 278 LASAHILALDYVEKLGPND---------------------KSKYFSVFNLGTSRGYSVRE 316
Query: 546 LLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVK 593
++ + TG P+P RREGD + A +D A+ LGW +
Sbjct: 317 VIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTL 364
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Score = 64.8 bits (156), Expect = 9e-12
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 2 INKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61
+NLGT +G SV +++ + TG P+P RREGD + A +D A++ LGW
Sbjct: 300 YFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKP 359
Query: 62 R 62
+
Sbjct: 360 K 360
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Score = 44.0 bits (102), Expect = 4e-05
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 54 QKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV---- 109
+ L ID V+H A AVGES+++PL YY NN++ + LL+ M H
Sbjct: 81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKII 140
Query: 110 --YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIIS 167
+ T+ + + + ++ YG++K E M++D ++A+ I
Sbjct: 141 FSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYG-IKGIC 199
Query: 168 LRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKP---------------HFTVFG 212
LRYFN GAH G IGE + T+++P + + +FG
Sbjct: 200 LRYFNACGAHEDGDIGEHY-QGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFG 258
Query: 213 ADYETEDGT 221
DY T DGT
Sbjct: 259 TDYPTPDGT 267
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 65.4 bits (158), Expect = 3e-12
Identities = 27/165 (16%), Positives = 57/165 (34%), Gaps = 9/165 (5%)
Query: 51 DLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 110
D+A A V + AA VG S +P+ + + +LLE ++
Sbjct: 57 DMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPE 116
Query: 111 QLVF-SSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLR 169
+ +S+ ++G Q E+ P ++ YG K + + + ++ + S
Sbjct: 117 TRFYQASTSEMFGLIQAERQDENTPFYP-RSPYGVAKLYGHWITVNYRESFG-LHASSGI 174
Query: 170 YFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGAD 214
FN + +A++ +G + + D
Sbjct: 175 LFNHESPLR------GIEFVTRKVTDAVARIKLGKQQELRLGNVD 213
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 48.1 bits (113), Expect = 2e-06
Identities = 38/254 (14%), Positives = 78/254 (30%), Gaps = 16/254 (6%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHF 282
+V + +S DT +R + + + D+ D + K V +
Sbjct: 26 RVHGLVARRSS----DTRWRLRELGIE--GDIQYEDGDMADACSVQRAVIKAQPQEVYNL 79
Query: 283 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVF-SSSCTVYGEPQFLPITED 341
AA VG S +P+ + + +LLE ++ + +S+ ++G Q E+
Sbjct: 80 AAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDEN 139
Query: 342 HPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLG---TGQGTSVLQLLRT 398
P ++ Y + G + + G I +N G ++
Sbjct: 140 TPFYP-RSPYGVAKLYGH---WITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDA 195
Query: 399 FERVTGNKPVPYIFYNL-GTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLL 457
R+ K N+ + + + Y + TG T+V +
Sbjct: 196 VARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKADD-YVVATGVTTTVRDMC 254
Query: 458 RTFERVTGKPVPYI 471
+ G
Sbjct: 255 QIAFEHVGLDYRDF 268
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 38.8 bits (89), Expect = 0.001
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 533 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVE----ARREGDIVSMYANTDLAQRELGWSA 588
Y + TG T+V + + G ++ R ++ + N AQR LGW
Sbjct: 240 YVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKP 299
Query: 589 RCTVK 593
R ++
Sbjct: 300 RTSLD 304
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 38.1 bits (87), Expect = 0.002
Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Query: 6 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVE----ARREGDIVSMYANTDLAQKELGWSA 61
Y + TG T+V + + G ++ R ++ + N AQ+ LGW
Sbjct: 240 YVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKP 299
Query: 62 R 62
R
Sbjct: 300 R 300
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 65.0 bits (157), Expect = 6e-12
Identities = 28/139 (20%), Positives = 46/139 (33%), Gaps = 17/139 (12%)
Query: 51 DLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 110
D+A EL D H+AA S+ +P + N I T LLE + + +
Sbjct: 60 DIADAELVDKLAAKADAIV--HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIR 117
Query: 111 QLVFSSSCTVYGE------------PQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSK 158
S+ VYG+ T + N + Y TK + ++K +
Sbjct: 118 F-HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNY-NPSSPYSSTKAASDLIVKAWVR 175
Query: 159 AHKEWNIISLRYFNPVGAH 177
+ N G +
Sbjct: 176 SFG-VKATISNCSNNYGPY 193
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 38.0 bits (87), Expect = 0.002
Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 13/71 (18%)
Query: 23 FERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGES 82
E++ Y R G + + + ELGW+ + T D E
Sbjct: 266 LEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFT-DFS------------EG 312
Query: 83 MQEPLMYYKNN 93
++E + +Y +N
Sbjct: 313 LEETIQWYTDN 323
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 56.1 bits (134), Expect = 5e-09
Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 8/136 (5%)
Query: 50 TDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV 109
DL E D + + NN + + N++E + +G+
Sbjct: 65 VDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHS-VIMYNNTMISFNMIEAARINGI 123
Query: 110 YQLVFSSSCTVYGEPQFLPITEDHP------TGNIKNVYGKTKHFIEEMLKDLSKAHKEW 163
+ ++SS +Y E + L T ++ +G K EE+ K +K
Sbjct: 124 KRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFG-I 182
Query: 164 NIISLRYFNPVGAHPS 179
R+ N G +
Sbjct: 183 ECRIGRFHNIYGPFGT 198
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 45.3 bits (106), Expect = 1e-05
Identities = 12/93 (12%), Positives = 33/93 (35%), Gaps = 15/93 (16%)
Query: 2 INKFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSA 61
+ N+G+ + S+ ++ K +P I + ++ +L +++LGW+
Sbjct: 251 FREPVNIGSDEMVSMNEMAEMVLSFEEKKLP-IHHIPGPEGVRGRNSDNNLIKEKLGWAP 309
Query: 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNL 94
+ E ++ + K +
Sbjct: 310 N--MRLK------------EGLRITYFWIKEQI 328
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 43.8 bits (102), Expect = 4e-05
Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 533 YNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTV 592
N+G+ + S+ ++ K +P I + ++ +L + +LGW+ +
Sbjct: 255 VNIGSDEMVSMNEMAEMVLSFEEKKLP-IHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRL 313
Query: 593 K 593
K
Sbjct: 314 K 314
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 53.1 bits (126), Expect = 4e-08
Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 13/175 (7%)
Query: 51 DLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMK----S 106
DL D V + AA V S + P + LLE ++
Sbjct: 64 DLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTID 123
Query: 107 HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNII 166
G + + + P +E P + ++ Y +K + +A+
Sbjct: 124 SGRTVKYYQAGSSEMFGSTPPPQSETTPF-HPRSPYAASKCAAHWYTVNYREAYG-LFAC 181
Query: 167 SLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGT 221
+ FN H S R GE+ I L ++ +G + G + D
Sbjct: 182 NGILFN----HESPRRGENFVTRK--ITRALGRIKVGLQT-KLFLGNLQASRDWG 229
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 48.5 bits (114), Expect = 1e-06
Identities = 19/127 (14%), Positives = 36/127 (28%), Gaps = 4/127 (3%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHF 282
+V + ++ + + + DL D + L D V +
Sbjct: 27 EVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNL 86
Query: 283 AAVKAVGESMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPI 338
AA V S + P + LLE ++ G + + + P
Sbjct: 87 AAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQ 146
Query: 339 TEDHPTG 345
+E P
Sbjct: 147 SETTPFH 153
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 43.6 bits (101), Expect = 4e-05
Identities = 22/249 (8%), Positives = 62/249 (24%), Gaps = 31/249 (12%)
Query: 223 KVVAIDNFVNSVHIGDTPCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHF 282
+ ++ + F L D RL + + D+
Sbjct: 29 PTYVLFRPEV----VSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISALA 84
Query: 283 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDH 342
++++ + L+E +K G + S + D
Sbjct: 85 G-------------GVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMD---------PDI 122
Query: 343 PTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERV 402
++ + + T + Y G+ + + +
Sbjct: 123 MEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVL 182
Query: 403 TGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFER 462
+ GT ++ + + + Y S ++++ +ER
Sbjct: 183 IYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNK-----TMYIRPPMNILSQKEVIQIWER 237
Query: 463 VTGKPVPYI 471
++ + + I
Sbjct: 238 LSEQNLDKI 246
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 41.6 bits (96), Expect = 2e-04
Identities = 27/233 (11%), Positives = 58/233 (24%), Gaps = 29/233 (12%)
Query: 240 PCSIRAIEQFTGKKVDFYSCDLVD-KNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMY 298
+ A E V + L++ + +F + + +
Sbjct: 37 LKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS--------------Q 82
Query: 299 YKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQG 358
+ + +L + K G Q SS + P Y G
Sbjct: 83 AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLP 142
Query: 359 TSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTG 418
++ + T + + G + P+P++ G
Sbjct: 143 STFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHA-------PFDPDIPLPWLDAEHDVG 195
Query: 419 QGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYI 471
+ ++ G L + S +Q+ F R + V Y+
Sbjct: 196 PAL-LQIFKDGPQKWNGH-----RIALT-FETLSPVQVCAAFSRALNRRVTYV 241
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 40.6 bits (93), Expect = 4e-04
Identities = 14/102 (13%), Positives = 27/102 (26%), Gaps = 2/102 (1%)
Query: 493 VTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF-E 551
G+ P + S + + P GT +L TF +
Sbjct: 230 FNGEVSPA-LALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRK 288
Query: 552 RVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVK 593
K P + + A + + LG +++
Sbjct: 289 LYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIE 330
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 37.5 bits (85), Expect = 0.004
Identities = 11/58 (18%), Positives = 16/58 (27%), Gaps = 1/58 (1%)
Query: 6 YNLGTGQGTSVLQLLRTF-ERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSAR 62
GT +L TF + K P + + A + K LG
Sbjct: 269 RVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGW 326
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 38.8 bits (88), Expect = 0.002
Identities = 13/99 (13%), Positives = 27/99 (27%), Gaps = 17/99 (17%)
Query: 1 MINKFYNLGTGQGTSVLQLLRTFERVTGK-----PVPYIVEARREGDIVSMYANTDLAQK 55
+ SV +L + K + R E + A
Sbjct: 285 AGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKL-M 343
Query: 56 ELGWSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNL 94
ELG + D ++ +S+ + +K+ +
Sbjct: 344 ELGLEPH--YLSDSLL---------DSLLNFAVQFKDRV 371
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 38.0 bits (86), Expect = 0.002
Identities = 10/73 (13%), Positives = 15/73 (20%), Gaps = 6/73 (8%)
Query: 526 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGK-----PVPYIVEARREGDIVSMYANTDLA 580
+ SV +L + K + R E + A
Sbjct: 283 AKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKL 342
Query: 581 QRELGWSARCTVK 593
ELG
Sbjct: 343 -MELGLEPHYLSD 354
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 37.1 bits (84), Expect = 0.004
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
Query: 254 VDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVM 313
D D+ + + + F + + VI+ AA AV + ++ + YK N I NL
Sbjct: 31 TDVQDLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAA 90
Query: 314 KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFY 351
S G + S+ V+ PITE +
Sbjct: 91 YSVGAEIVQISTDY-VFDGEAKEPITEFDEVNPQSAYG 127
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 600 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.97 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.97 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.96 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.96 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.96 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.95 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.95 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.95 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.94 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.94 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.94 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.94 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.93 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.93 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.93 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.93 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.92 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.92 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.92 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.92 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.91 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.91 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.91 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.9 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.9 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.89 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.88 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.88 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.87 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.87 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.86 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.84 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.83 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.82 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.81 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.8 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.77 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.77 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.76 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.75 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.74 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.72 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.71 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.71 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.62 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.46 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.42 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.3 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.28 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.27 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.27 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.27 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.26 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.26 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.25 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.25 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.25 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.25 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.24 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.24 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.23 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.23 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.22 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.21 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.21 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.21 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.2 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.2 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.2 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.18 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.18 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.18 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.17 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.17 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.16 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.16 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.14 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.12 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.1 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.1 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.09 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.09 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.09 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.08 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.08 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.07 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.06 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.06 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.06 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.06 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.05 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.05 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.04 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.04 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.03 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.0 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 98.99 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 98.99 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.97 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.96 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 98.95 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 98.95 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.94 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.92 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 98.9 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.89 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 98.89 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 98.86 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 98.85 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 98.75 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 98.72 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 98.71 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 98.68 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 98.61 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.48 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 98.41 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 98.37 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 98.32 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.28 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 98.13 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 98.12 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.1 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 98.07 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.0 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 97.91 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 97.9 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 97.77 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 97.76 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 97.75 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 97.7 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 97.69 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 97.68 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 97.66 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 97.64 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 97.62 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 97.62 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 97.58 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 97.55 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 97.54 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 97.51 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 97.49 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 97.48 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 97.46 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 97.45 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 97.41 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 97.38 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 97.37 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 97.34 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.32 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 97.3 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 97.29 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 97.23 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 97.19 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 97.15 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 97.11 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 97.05 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.04 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 97.03 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 97.02 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 96.99 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 96.98 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 96.97 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 96.95 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 96.9 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 96.88 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 96.84 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 96.83 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 96.82 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 96.76 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 96.76 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 96.67 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 96.64 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 96.64 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 96.57 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 96.57 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 96.33 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 96.13 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 95.61 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 95.61 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 95.35 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 95.01 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 95.01 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 94.19 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 94.11 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 92.98 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 92.43 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 90.07 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 89.74 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 87.41 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 85.05 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 84.18 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 83.84 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 83.54 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 83.47 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 81.61 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 80.74 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=1.9e-31 Score=274.73 Aligned_cols=252 Identities=18% Similarity=0.244 Sum_probs=200.9
Q ss_pred hCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCC---CEEEEecC
Q psy16545 250 TGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV---YQLVFSSS 326 (600)
Q Consensus 250 ~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~---~r~v~~SS 326 (600)
..++++++.+|++|...+.++++...+|+|+|+|+......++.++..++++|+.||.+||++|++.++ +||||+||
T Consensus 53 ~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS 132 (357)
T d1db3a_ 53 CNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQAST 132 (357)
T ss_dssp --CCEEECCCCSSCHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred cCCCeEEEEeecCCHHHHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEc
Confidence 356899999999999999999998888999999999888888999999999999999999999999765 47999999
Q ss_pred cccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCC
Q psy16545 327 CTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGN 405 (600)
Q Consensus 327 ~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~ 405 (600)
++|||.....+++|++|..|. ++|+.|| ..+|.+++.+++.++++.+++||++ +||+.+....
T Consensus 133 ~~vYG~~~~~~~~E~~~~~P~-~~Y~~sK---~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~------------ 196 (357)
T d1db3a_ 133 SELYGLVQEIPQKETTPFYPR-SPYAVAK---LYAYWITVNYRESYGMYACNGILFNHESPRRGETFV------------ 196 (357)
T ss_dssp GGGGTTCCSSSBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSH------------
T ss_pred hhhhCCCCCCCcCCCCCCCCC-ChHHHHH---HHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCC------------
Confidence 999998888899999999885 8999999 8899999999999999999999987 6554332210
Q ss_pred CCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHH-HHHhCCCCceeeccCCCCCcccch
Q psy16545 406 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF-ERVTGKPVPYIFYNLGTGQGTSVL 484 (600)
Q Consensus 406 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~ 484 (600)
...+...+ ....+.+..+.+ |++.+.
T Consensus 197 -----------------------------------------------~~~i~~~~~~~~~~~~~~~~~-----g~~~~~- 223 (357)
T d1db3a_ 197 -----------------------------------------------TRKITRAIANIAQGLESCLYL-----GNMDSL- 223 (357)
T ss_dssp -----------------------------------------------HHHHHHHHHHHHTTSCCCEEE-----SCTTCE-
T ss_pred -----------------------------------------------chHHHHHHHHHHhCCCceEEE-----CCCCee-
Confidence 01111112 112344444432 455545
Q ss_pred hhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccc--
Q psy16545 485 QLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIV-- 562 (600)
Q Consensus 485 ~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~-- 562 (600)
|+|+| |+|+++++..+++++ .+++||+++|+.+|++|+++++.+.+|.......
T Consensus 224 ---r~~~~--------------------v~D~~~a~~~~~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~ 279 (357)
T d1db3a_ 224 ---RDWGH--------------------AKDYVKMQWMMLQQE-QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTG 279 (357)
T ss_dssp ---ECCEE--------------------HHHHHHHHHHTTSSS-SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCG
T ss_pred ---eccee--------------------echHHHHHHHHHhCC-CCCeEEECCCCceehHHHHHHHHHHhCCcccccccc
Confidence 89988 999999999988765 5689999999999999999999999985322110
Q ss_pred -----------------------------cCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 563 -----------------------------EARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 563 -----------------------------~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
...|+.+.....+|++|++++|||+|+++|+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~skakk~LGw~P~~sl~e 340 (357)
T d1db3a_ 280 VEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLRE 340 (357)
T ss_dssp GGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHH
T ss_pred ccccchhhhhhcccccccccCceeEeeccccCCCccccccccCHHHHHHHHCCCcCCCHHH
Confidence 01134455667789999999999999999874
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=5.5e-31 Score=270.37 Aligned_cols=205 Identities=43% Similarity=0.680 Sum_probs=169.2
Q ss_pred CCCCcchHHHHHHHhhhcc-------------------------CCCccEEecccccccccChHHhhhHHhhhhcccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVT-------------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~-------------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
|||++||+|+++.+..... ..+++++ .+|++|.+.+.+ ++.
T Consensus 6 VTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~-----~~Dl~d~~~l~~---------~~~ 71 (347)
T d1z45a2 6 VTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFY-----EVDLCDRKGLEK---------VFK 71 (347)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEE-----ECCTTCHHHHHH---------HHH
T ss_pred EeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEE-----EeecCCHHHHHH---------HHh
Confidence 7999999999985432111 1234555 789999999988 555
Q ss_pred cCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCC----CCCCCCCCCCCCCC
Q psy16545 64 THDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQ----FLPITEDHPTGNIK 139 (600)
Q Consensus 64 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~----~~~~~E~~~~~~p~ 139 (600)
..++|+|||+||.........++...+.+|+.|+.+|+++|++.++++||++||+.+||... ..+++|+.+. .|.
T Consensus 72 ~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~-~p~ 150 (347)
T d1z45a2 72 EYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPL-GPT 150 (347)
T ss_dssp HSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC-CCC
T ss_pred ccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCC-CCC
Confidence 56899999999998766666788889999999999999999999999999999999998543 3568899999 899
Q ss_pred ChHHHHHHHHHHHHHHHHhhc-CCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccc
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETE 218 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~ 218 (600)
++|+.||.++|++++.+.+.. .+++++++||+++||+.+.+.+|+...+..+.+++.+.+.+.+..+++.++|+|.+.|
T Consensus 151 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~ 230 (347)
T d1z45a2 151 NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSR 230 (347)
T ss_dssp SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------C
T ss_pred ChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCcccc
Confidence 999999999999999987643 3899999999999999999888888877778899999998888888899999999999
Q ss_pred cCcceEEeee
Q psy16545 219 DGTGKVVAID 228 (600)
Q Consensus 219 ~~~~v~d~v~ 228 (600)
+|++++|+++
T Consensus 231 ~~~~~~d~~~ 240 (347)
T d1z45a2 231 DGTPIRDYIH 240 (347)
T ss_dssp CSSCEECEEE
T ss_pred CCceeeeeee
Confidence 9999999885
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=1.1e-29 Score=259.48 Aligned_cols=274 Identities=32% Similarity=0.541 Sum_probs=210.6
Q ss_pred cHHHHHhhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEE
Q psy16545 242 SIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQL 321 (600)
Q Consensus 242 ~l~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~ 321 (600)
.....++....+++++++|+.|.+.+.++++..++|+|||+||....+.+..++...++.|+.||.++|++|++.++++|
T Consensus 40 ~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~ 119 (338)
T d1udca_ 40 VLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNF 119 (338)
T ss_dssp HHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred hHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEE
Confidence 34556666778999999999999999999998889999999998877778889999999999999999999999999999
Q ss_pred EEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH-hCCCCeeEeecc-cCCCCcchHHHHHHHH
Q psy16545 322 VFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV-TGNKPVPYIFYN-LGTGQGTSVLQLLRTF 399 (600)
Q Consensus 322 v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~-~~~~~~~~r~~~-~g~~~~~~~~~~~~~~ 399 (600)
|++||.+||+.....+..|+.+...+.++|+.+| ..+|.++..+... .+++++++|+++ +|++....
T Consensus 120 i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK---~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-------- 188 (338)
T d1udca_ 120 IFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSK---LMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGD-------- 188 (338)
T ss_dssp EEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHH---HHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSS--------
T ss_pred EecCcceEEccccccccccccccCCCcchHHHHH---hhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCC--------
Confidence 9999999999877666666665543458999999 8899999876665 589999999988 66543321
Q ss_pred HHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHH-HHHhCCCCceeecc--CC
Q psy16545 400 ERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF-ERVTGKPVPYIFYN--LG 476 (600)
Q Consensus 400 ~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~ 476 (600)
+|+...... ..++..+ ....+...++.+++ +.
T Consensus 189 ---------------~~~~~~~~~------------------------------~~l~~~~~~~~~~~~~~i~i~g~~~~ 223 (338)
T d1udca_ 189 ---------------MGEDPQGIP------------------------------NNLMPYIAQVAVGRRDSLAIFGNDYP 223 (338)
T ss_dssp ---------------SCCCCCSSC------------------------------CSHHHHHHHHHTTSSSCEEEECSCSS
T ss_pred ---------------CCCCccccH------------------------------HHHHHHHHHHHhcCCCCEEEeCCCcc
Confidence 111110000 0011111 22233333333321 12
Q ss_pred CCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhc---CCCCceeEeEcCCCCCccHHHHHHHHhhh
Q psy16545 477 TGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVT---GKPVPYIFYNLGTGQGTSVLQLLRTFERV 553 (600)
Q Consensus 477 ~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~---~~~~~~~~~nl~~~~~~s~~e~~~~~~~~ 553 (600)
.++++++ |||+| ++|++.++.... .....+++||+++++++|+.|+++.+.++
T Consensus 224 ~~~g~~~----rd~i~--------------------v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~ 279 (338)
T d1udca_ 224 TEDGTGV----RDYIH--------------------VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKA 279 (338)
T ss_dssp STTSSCE----ECEEE--------------------HHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHH
T ss_pred cCCCCce----eeEEE--------------------EeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHH
Confidence 2346655 88988 778776665543 34445789999999999999999999999
Q ss_pred cCCcccccccCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 554 TGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 554 ~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
+|.+.++.+.+.++++...+.+|++|++++|||+|+++|+.+
T Consensus 280 ~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgwkp~~~l~eg 321 (338)
T d1udca_ 280 CGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEM 321 (338)
T ss_dssp HTSCCCEEEECCCTTCCSBCCBCCHHHHHHHCCCCCCCHHHH
T ss_pred HCCCCceEECCCCCCCCCEeeECHHHHHHHHCCCcCCCHHHH
Confidence 999989988898888888999999999999999999998753
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.97 E-value=2.1e-30 Score=263.19 Aligned_cols=248 Identities=21% Similarity=0.259 Sum_probs=208.3
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
..+++++.+|+.+......... .+|.|+|+|+.........++...+++|+.++.+++++|++.++++|||+||+++|
T Consensus 54 ~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~y 131 (322)
T d1r6da_ 54 DPRLRFVHGDIRDAGLLARELR--GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVY 131 (322)
T ss_dssp CTTEEEEECCTTCHHHHHHHTT--TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGG
T ss_pred CCCeEEEEeccccchhhhcccc--ccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceee
Confidence 4678999999999988887766 88999999998877777888999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcc
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVP 409 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~ 409 (600)
|.....+++|++|..|. ++||.+| ..+|.+++.+.+.++++++++||++ |||++....
T Consensus 132 g~~~~~~~~E~~~~~p~-~~Y~~sK---~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~----------------- 190 (322)
T d1r6da_ 132 GSIDSGSWTESSPLEPN-SPYAASK---AGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEK----------------- 190 (322)
T ss_dssp CCCSSSCBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTS-----------------
T ss_pred cCCCCCCCCCCCCCCCC-CHHHHHH---HHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCc-----------------
Confidence 99888899999999886 8999999 8899999999999999999999887 554432210
Q ss_pred eEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhh
Q psy16545 410 YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRT 489 (600)
Q Consensus 410 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 489 (600)
.+..+++.+ ..++++++. ++|.++ |+
T Consensus 191 ------------------------------------------~i~~~i~~~--~~~~~i~v~------~~g~~~----r~ 216 (322)
T d1r6da_ 191 ------------------------------------------LIPLFVTNL--LDGGTLPLY------GDGANV----RE 216 (322)
T ss_dssp ------------------------------------------HHHHHHHHH--HTTCCEEEE------TTSCCE----EE
T ss_pred ------------------------------------------HHHHHHHHH--HcCCCcEEe------cCCCeE----Ec
Confidence 011222222 346776652 455555 99
Q ss_pred hhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccc-cccCCCCC
Q psy16545 490 FERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPY-IVEARREG 568 (600)
Q Consensus 490 fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~-~~~~~~~~ 568 (600)
|+| ++|+++++..+++++..+++||+++++++|+.|+++.+.+.+|.+.+. ...+.++.
T Consensus 217 ~i~--------------------v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~ 276 (322)
T d1r6da_ 217 WVH--------------------TDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKG 276 (322)
T ss_dssp EEE--------------------HHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTT
T ss_pred cEE--------------------HHHHHHHHHHHHhCCCCCCeeEEeecccchhHHHHHHHHHHhCCCccceeecCCCCC
Confidence 999 999999999999887778999999999999999999999999987554 44556677
Q ss_pred CccccccChHHHHHHcCceeeEEEEec
Q psy16545 569 DIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 569 ~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
+.....+|++|+++.|||+|+++++++
T Consensus 277 ~~~~~~~d~~k~~~~lg~~p~~~~eeg 303 (322)
T d1r6da_ 277 HDLRYSLDGGKIERELGYRPQVSFADG 303 (322)
T ss_dssp CCCBCCBCCHHHHHHHCCCCCSCHHHH
T ss_pred CCceeeeCHHHHHHHHCCCCCCCHHHH
Confidence 777888999999999999999998753
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.96 E-value=3.7e-30 Score=265.32 Aligned_cols=250 Identities=23% Similarity=0.300 Sum_probs=201.8
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcC---------CCEE
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG---------VYQL 321 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~---------~~r~ 321 (600)
.++++++.+|++|...+.++++..++|+||||||......+..+|...+++|+.||.+++++|++.+ ++||
T Consensus 49 ~~~~~~~~~Dl~d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~ 128 (361)
T d1kewa_ 49 SNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRF 128 (361)
T ss_dssp CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEE
T ss_pred cCCcEEEEccCCCHHHHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEE
Confidence 3578999999999999999998878999999999988778888999999999999999999998764 4599
Q ss_pred EEecCcccccCCCCCCC----------CCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcc
Q psy16545 322 VFSSSCTVYGEPQFLPI----------TEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGT 390 (600)
Q Consensus 322 v~~SS~~vYg~~~~~~~----------~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~ 390 (600)
||+||++|||.....+. .|+++..|. ++||.|| ..+|.+++.+.+.++++++++||++ +||++..
T Consensus 129 i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~-s~Yg~sK---~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~ 204 (361)
T d1kewa_ 129 HHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPS-SPYSASK---ASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP 204 (361)
T ss_dssp EEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT
T ss_pred EEeccceeeCCCccCCccccccCCCCcccCCCCCCC-CHHHHHH---HHHHHHHHHHHHHhCCCEEEEecCceECcCCCc
Confidence 99999999996543332 344555554 8899999 8899999999999999999999887 5554322
Q ss_pred hHHHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCce
Q psy16545 391 SVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPY 470 (600)
Q Consensus 391 ~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (600)
.. .+..++..+ ..|+++.+
T Consensus 205 ~~-----------------------------------------------------------~i~~~i~~~--~~g~~~~v 223 (361)
T d1kewa_ 205 EK-----------------------------------------------------------LIPLVILNA--LEGKPLPI 223 (361)
T ss_dssp TS-----------------------------------------------------------HHHHHHHHH--HHTCCEEE
T ss_pred Cc-----------------------------------------------------------HHHHHHHHH--HcCCCcEE
Confidence 10 012233333 23777665
Q ss_pred eeccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHH
Q psy16545 471 IFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF 550 (600)
Q Consensus 471 ~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~ 550 (600)
. |+|.++ |+|+| |+|+|+++..++++...+++|||++++.+|+.|+++.+
T Consensus 224 ~------g~g~~~----r~~i~--------------------v~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i 273 (361)
T d1kewa_ 224 Y------GKGDQI----RDWLY--------------------VEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTI 273 (361)
T ss_dssp E------TTSCCE----EEEEE--------------------HHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHH
T ss_pred e------CCCCeE----EeCEE--------------------HHHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHh
Confidence 2 455555 89988 99999999999987777889999999999999999999
Q ss_pred hhhcC--------CcccccccCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 551 ERVTG--------KPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 551 ~~~~g--------~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
.+.++ .+..+...+.++++.+.+.+|++|++++|||+|+++|+.+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~P~~~l~e~ 326 (361)
T d1kewa_ 274 CDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESG 326 (361)
T ss_dssp HHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCHHHH
T ss_pred hhhcccccccccCcccceeecCCCCCCCceeeeCHHHHHHHHCCCCCCCHHHH
Confidence 87664 3344555667778888999999999999999999998753
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=5.4e-30 Score=258.78 Aligned_cols=241 Identities=21% Similarity=0.380 Sum_probs=193.4
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
..+++...|+.+. ++. ++|+|||+|+......+..++...++.|+.++.+|+++|++.++ ||||+||++|||
T Consensus 49 ~~~d~~~~~~~~~-----~~~--~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~ 120 (312)
T d2b69a1 49 ENFELINHDVVEP-----LYI--EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYG 120 (312)
T ss_dssp TTEEEEECCTTSC-----CCC--CCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGB
T ss_pred CceEEEehHHHHH-----HHc--CCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheec
Confidence 3455555555433 333 79999999998877777789999999999999999999999986 899999999999
Q ss_pred CCCCCCCCCCC-----CCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCC
Q psy16545 332 EPQFLPITEDH-----PTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGN 405 (600)
Q Consensus 332 ~~~~~~~~E~~-----~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~ 405 (600)
.....+++|+. |..|. ++|+.+| ..+|.+++.+++.++++++++|+++ +||++....
T Consensus 121 ~~~~~~~~e~~~~~~~~~~p~-~~Y~~sK---~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~------------- 183 (312)
T d2b69a1 121 DPEVHPQSEDYWGHVNPIGPR-ACYDEGK---RVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMND------------- 183 (312)
T ss_dssp SCSSSSBCTTCCCBCCSSSTT-HHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTC-------------
T ss_pred CCCCCCCCccccCCCCCCCCc-cHHHHHH---HHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCC-------------
Confidence 87777777664 44554 8999999 8899999999999999999999887 544322110
Q ss_pred CCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchh
Q psy16545 406 KPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQ 485 (600)
Q Consensus 406 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 485 (600)
...+..++..+ ..|+++++. ++|.+.
T Consensus 184 --------------------------------------------~~~i~~~i~~~--~~g~~i~i~------~~g~~~-- 209 (312)
T d2b69a1 184 --------------------------------------------GRVVSNFILQA--LQGEPLTVY------GSGSQT-- 209 (312)
T ss_dssp --------------------------------------------CCHHHHHHHHH--HHTCCEEEE------SSSCCE--
T ss_pred --------------------------------------------ccHHHHHHHHH--HcCCCeEEe------CCCCee--
Confidence 00122333333 347777762 555555
Q ss_pred hhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCC
Q psy16545 486 LLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEAR 565 (600)
Q Consensus 486 ~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 565 (600)
|+|+| ++|+++++..+++.. ..++||+++++.+|+.|+++++++.+|.+.++.+.+.
T Consensus 210 --r~~i~--------------------v~D~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 266 (312)
T d2b69a1 210 --RAFQY--------------------VSDLVNGLVALMNSN-VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSE 266 (312)
T ss_dssp --EECEE--------------------HHHHHHHHHHHHTSS-CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECC
T ss_pred --EccEE--------------------HHHHHHHHHHHHhhc-cCCceEecCCcccchhhHHHHHHHHhCCCCceEECCC
Confidence 89999 999999999888765 4679999999999999999999999999988888888
Q ss_pred CCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 566 REGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 566 ~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+.+++....+|++|++++|||+|+++|+.
T Consensus 267 ~~~~~~~~~~d~~k~~~~lgw~p~~~l~~ 295 (312)
T d2b69a1 267 AQDDPQKRKPDIKKAKLMLGWEPVVPLEE 295 (312)
T ss_dssp CTTCCCCCCBCCHHHHHHHCCCCCSCHHH
T ss_pred CCCCCCeeeECHHHHHHHHCCCCCCCHHH
Confidence 88888889999999999999999999865
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.7e-28 Score=250.04 Aligned_cols=277 Identities=39% Similarity=0.641 Sum_probs=213.4
Q ss_pred cccHHHHHhhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCC
Q psy16545 240 PCSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVY 319 (600)
Q Consensus 240 ~~~l~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~ 319 (600)
....+.+..+...+++++.+|++|...+.+++....+++++|+||..+...+..+|...++.|+.++.+++++|++.+++
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~ 125 (346)
T d1ek6a_ 46 PESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVK 125 (346)
T ss_dssp BHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHhcCCCcEEEEeeccccccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcc
Confidence 34456677777889999999999999999999888899999999998888888899999999999999999999999999
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH-hCCCCeeEeecc-cCCCCcchHHHHHH
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV-TGNKPVPYIFYN-LGTGQGTSVLQLLR 397 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~-~~~~~~~~r~~~-~g~~~~~~~~~~~~ 397 (600)
+|+|+||+.+||........++.+...+.++|+.+| ..+|..++.+.+. .+++.+++|+++ +|+.....
T Consensus 126 ~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k---~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~------ 196 (346)
T d1ek6a_ 126 NLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK---FFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGC------ 196 (346)
T ss_dssp EEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH---HHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSS------
T ss_pred cccccccceeeeccccccccccccccccCChHHHHH---HHHHHHHHHHHHhccCCceEEEeecceeccCCCCC------
Confidence 999999999999876655455544444458999999 7899999988775 589999999988 66543321
Q ss_pred HHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccC--
Q psy16545 398 TFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNL-- 475 (600)
Q Consensus 398 ~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 475 (600)
+|+........ +.. ..+....++..++.+++.
T Consensus 197 -----------------~~~~~~~~~~~---------------------------~~~--~~~~~~~~~~~~i~i~g~~~ 230 (346)
T d1ek6a_ 197 -----------------IGEDPQGIPNN---------------------------LMP--YVSQVAIGRREALNVFGNDY 230 (346)
T ss_dssp -----------------CCCCCSSSCCS---------------------------HHH--HHHHHHHTSSSCEEEECSCS
T ss_pred -----------------cCccccccHHH---------------------------HHH--HHHHHHHcCCCcEEEcCCcc
Confidence 12211100000 111 111222333333322211
Q ss_pred CCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhc---CCCCceeEeEcCCCCCccHHHHHHHHhh
Q psy16545 476 GTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVT---GKPVPYIFYNLGTGQGTSVLQLLRTFER 552 (600)
Q Consensus 476 ~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~---~~~~~~~~~nl~~~~~~s~~e~~~~~~~ 552 (600)
...+|.++ |||+| ++|++.++..++ .....+++||+++++.+|++|+++.+.+
T Consensus 231 ~~~~g~~~----Rdfi~--------------------v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~ 286 (346)
T d1ek6a_ 231 DTEDGTGV----RDYIH--------------------VVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEK 286 (346)
T ss_dssp SSSSSSCE----ECEEE--------------------HHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHH
T ss_pred cCCCCCee----EeEEE--------------------EEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHH
Confidence 12455555 89999 888888777653 3345688999999999999999999999
Q ss_pred hcCCcccccccCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 553 VTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 553 ~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
++|.+.++.+.+.++++....++|++|+++.|||+|+++||.+
T Consensus 287 ~~~~~~~~~~~~~~~~e~~~~~~d~~k~~~~lgw~p~~slee~ 329 (346)
T d1ek6a_ 287 ASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRM 329 (346)
T ss_dssp HHCSCCCEEEECCCTTCCSEECBCCHHHHHTTCCCCCCCHHHH
T ss_pred HhCCCCCeEECCCCCCCCCEeeECHHHHHHHHCCCcCCCHHHH
Confidence 9999989989999999999999999999999999999998763
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.95 E-value=4.8e-28 Score=247.58 Aligned_cols=251 Identities=20% Similarity=0.293 Sum_probs=204.8
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
..++++.+|+.|......... .++.|+|+++......+..++...++.|+.|+.+|+++|+++++++|||+||.+|||
T Consensus 70 ~~~~~~~~d~~d~~~~~~~~~--~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg 147 (341)
T d1sb8a_ 70 SNFKFIQGDIRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYG 147 (341)
T ss_dssp TTEEEEECCTTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred CCeeEEeeccccccccccccc--cccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeC
Confidence 568999999999988777766 889999999988877788899999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcce
Q psy16545 332 EPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPY 410 (600)
Q Consensus 332 ~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~ 410 (600)
.....|.+|++|..|. +.|+.+| ..+|.+++.+.+.++++++++||++ +|+++.....
T Consensus 148 ~~~~~~~~E~~~~~p~-~~Y~~sK---~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~----------------- 206 (341)
T d1sb8a_ 148 DHPGLPKVEDTIGKPL-SPYAVTK---YVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGA----------------- 206 (341)
T ss_dssp TCCCSSBCTTCCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCST-----------------
T ss_pred CCCCCCccCCCCCCCC-CcchHHH---HHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCc-----------------
Confidence 9888899999999886 8999999 8899999999999999999999987 5543321100
Q ss_pred EEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhh
Q psy16545 411 IFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF 490 (600)
Q Consensus 411 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f 490 (600)
....+..+...+ ..|+++++. |+|.+. |+|
T Consensus 207 --------------------------------------~~~~i~~~~~~~--~~g~~i~~~------g~g~~~----r~~ 236 (341)
T d1sb8a_ 207 --------------------------------------YAAVIPKWTSSM--IQGDDVYIN------GDGETS----RDF 236 (341)
T ss_dssp --------------------------------------TCCHHHHHHHHH--HHTCCCEEE------SSSCCE----ECC
T ss_pred --------------------------------------hhhhHHHHHHHH--HcCCceEEc------CCCCEE----EEE
Confidence 000012222222 347887763 556655 999
Q ss_pred hhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC--CceeEeEcCCCCCccHHHHHHHHhhhcCCc-----cccccc
Q psy16545 491 ERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP--VPYIFYNLGTGQGTSVLQLLRTFERVTGKP-----VPYIVE 563 (600)
Q Consensus 491 i~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~--~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~-----~~~~~~ 563 (600)
+| |+|++.|+..++... ..+++||+++++..|++|+++.+++.++.+ ....+.
T Consensus 237 i~--------------------v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~ 296 (341)
T d1sb8a_ 237 CY--------------------IENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYR 296 (341)
T ss_dssp EE--------------------HHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEE
T ss_pred EE--------------------EeccchhhhhhhhccccccceeeeecccccchHHHHHHHHHHHhcccccccccccccc
Confidence 99 899999988887654 347899999999999999999999998743 333444
Q ss_pred CCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 564 ARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 564 ~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
+.++++.+...+|++|+++.|||+|+++++.+
T Consensus 297 ~~~~~~~~~~~~d~~k~~~~LGw~p~~sl~~g 328 (341)
T d1sb8a_ 297 DFREGDVRHSLADISKAAKLLGYAPKYDVSAG 328 (341)
T ss_dssp CCCTTCCSBCCBCCHHHHHHTCCCCCCCHHHH
T ss_pred CCCCCCcCeeeeCHHHHHHHHCCCcCCCHHHH
Confidence 56677888889999999999999999998753
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=3e-28 Score=250.63 Aligned_cols=207 Identities=19% Similarity=0.120 Sum_probs=170.5
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc--------------------------cccccChHHhhhHHhhhhccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------------EGDIVSMYANTDLAQKELGWSAR 62 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------------~~Dl~~~~~~~~~~~~~~~~~~~ 62 (600)
|||++|++|++|.+.. ...+.+++++||. .+|++|.+++.+ ++
T Consensus 6 ITGatGfiGs~lv~~L--l~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~~ 74 (357)
T d1db3a_ 6 ITGVTGQDGSYLAEFL--LEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTR---------IL 74 (357)
T ss_dssp EETTTSHHHHHHHHHH--HHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHH---------HH
T ss_pred EeCCCcHHHHHHHHHH--HHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHH---------HH
Confidence 7999999999995532 2223344444431 789999999998 66
Q ss_pred ccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCC---CeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 63 CTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV---YQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 63 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~---~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
...++|+|||+||......+..++...+++|+.||.+|+++|++.++ +|||++||+.+||.+...+++|+++. .|.
T Consensus 75 ~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~-~P~ 153 (357)
T d1db3a_ 75 REVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPF-YPR 153 (357)
T ss_dssp HHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCC-CCC
T ss_pred hccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCC-CCC
Confidence 65678999999999887778899999999999999999999999765 47999999999998888899999999 899
Q ss_pred ChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCccccc
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETED 219 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~ 219 (600)
++|+.||+++|.+++.+++++ +++++++||++||||.... ......+...+.+.+.++ +...++|+|.+.|+
T Consensus 154 ~~Y~~sK~~~E~~~~~~~~~~-~l~~~ilR~~~vyGp~~~~------~~~~~~i~~~~~~~~~~~-~~~~~~g~~~~~r~ 225 (357)
T d1db3a_ 154 SPYAVAKLYAYWITVNYRESY-GMYACNGILFNHESPRRGE------TFVTRKITRAIANIAQGL-ESCLYLGNMDSLRD 225 (357)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECTTSCT------TSHHHHHHHHHHHHHTTS-CCCEEESCTTCEEC
T ss_pred ChHHHHHHHHHHHHHHHHHHh-CCCEEEEEeccccCCCCCc------CCCchHHHHHHHHHHhCC-CceEEECCCCeeec
Confidence 999999999999999999887 9999999999999995321 223345666777777644 44456899999999
Q ss_pred CcceEEeeeccccccc
Q psy16545 220 GTGKVVAIDNFVNSVH 235 (600)
Q Consensus 220 ~~~v~d~v~~~~~a~~ 235 (600)
++|++|+++++..+++
T Consensus 226 ~~~v~D~~~a~~~~~~ 241 (357)
T d1db3a_ 226 WGHAKDYVKMQWMMLQ 241 (357)
T ss_dssp CEEHHHHHHHHHHTTS
T ss_pred ceeechHHHHHHHHHh
Confidence 9999999998876654
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.95 E-value=2.6e-27 Score=246.03 Aligned_cols=281 Identities=26% Similarity=0.412 Sum_probs=207.6
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-CccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 329 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~v 329 (600)
...+.++.+|+.|.+.+.++++.. ++|+|||+|+.........++...++.|+.++.++|+++++.+++++++.||.++
T Consensus 68 ~~~~~~~~~Di~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~ 147 (383)
T d1gy8a_ 68 DRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAI 147 (383)
T ss_dssp TCCCEEEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred ccceEEEECcccCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccc
Confidence 346789999999999999998765 4699999999887777778888999999999999999999999999999999999
Q ss_pred ccCCC-------CCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHH
Q psy16545 330 YGEPQ-------FLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFER 401 (600)
Q Consensus 330 Yg~~~-------~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~ 401 (600)
|+... ..++.|+.+..|. ++|+.+| ..+|.+++.+.+.++++++++|+++ +||++.......
T Consensus 148 ~~~~~~~~~~~~~~~~~e~~~~~p~-~~Y~~sK---~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~------ 217 (383)
T d1gy8a_ 148 FGNPTMGSVSTNAEPIDINAKKSPE-SPYGESK---LIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEH------ 217 (383)
T ss_dssp TBSCCC-----CCCCBCTTSCCBCS-SHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCC------
T ss_pred ccccccccccccccccccccCCCCC-CHHHhhH---hHHHHHHHHHHHHhCCCEEEEecceeeccCcccccccc------
Confidence 98543 3356777777775 8999999 8899999999999999999999998 777654321000
Q ss_pred HhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcc
Q psy16545 402 VTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGT 481 (600)
Q Consensus 402 ~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 481 (600)
..++. ..+..++...........+..+ .. ....++++++.-..+..++|.
T Consensus 218 ------------~~~~~--~~ip~ii~~~~~~~~~~~~~~~--------------~~--~~~~~~~~~i~g~~~~~~dg~ 267 (383)
T d1gy8a_ 218 ------------YQGST--HLIPIILGRVMSDIAPDQRLTI--------------HE--DASTDKRMPIFGTDYPTPDGT 267 (383)
T ss_dssp ------------STTCC--SHHHHHHHHHHHHHSCC---------------------------CCCEEEECSCSSSTTSS
T ss_pred ------------ccccc--hhHHHHHHHHHhhccccccchh--------------hh--hhhcCCceEEeCCccccCCCC
Confidence 00000 0000111111111111111000 00 112245555422223345677
Q ss_pred cchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcC---------CCCceeEeEcCCCCCccHHHHHHHHhh
Q psy16545 482 SVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTG---------KPVPYIFYNLGTGQGTSVLQLLRTFER 552 (600)
Q Consensus 482 ~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~---------~~~~~~~~nl~~~~~~s~~e~~~~~~~ 552 (600)
++ |||+| |+|+++++..+++ ....+++|||++++++|++|+++++.+
T Consensus 268 ~~----Rdfi~--------------------v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i~~ 323 (383)
T d1gy8a_ 268 CV----RDYVH--------------------VCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARK 323 (383)
T ss_dssp CE----ECEEE--------------------HHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHH
T ss_pred eE----EeeEE--------------------HHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHHHH
Confidence 77 89999 8888888877653 123478999999999999999999999
Q ss_pred hcCCcccccccCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 553 VTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 553 ~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
.+|.+.++...+.++++++..++|++|++++|||+|+++++.+
T Consensus 324 ~~~~~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~ 366 (383)
T d1gy8a_ 324 TTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEA 366 (383)
T ss_dssp HHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHH
T ss_pred HhCCCCceEECCCCCCCcCEeeeCHHHHHHHHCCccCCCHHHH
Confidence 9999989888888888999999999999999999999998753
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.94 E-value=1.2e-26 Score=234.89 Aligned_cols=252 Identities=17% Similarity=0.158 Sum_probs=203.8
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCC-CEEEEecCccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV-YQLVFSSSCTV 329 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~r~v~~SS~~v 329 (600)
.++++++.+|+.|...+.+.+....+++++|+|+.........++...++.|+.|+.++|++|++.++ ++|+++||..+
T Consensus 48 ~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~ 127 (321)
T d1rpna_ 48 EGDIQYEDGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEM 127 (321)
T ss_dssp GGGEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGG
T ss_pred cCCcEEEEccccChHHhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhh
Confidence 35789999999999999999888788999999998888888889999999999999999999999886 58999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCc
Q psy16545 330 YGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPV 408 (600)
Q Consensus 330 Yg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~ 408 (600)
||.....+.+|++|..|. ++|+.+| ..+|.+++.+.+.++++.+++||++ +||..+....
T Consensus 128 ~~~~~~~~~~E~~~~~p~-~~Y~~sK---~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~--------------- 188 (321)
T d1rpna_ 128 FGLIQAERQDENTPFYPR-SPYGVAK---LYGHWITVNYRESFGLHASSGILFNHESPLRGIEFV--------------- 188 (321)
T ss_dssp GCSCSSSSBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSH---------------
T ss_pred cCcccCCCCCCCCCcccc-ChhHHHH---HHHHHHHHHHHhhcCCcEEEEEEecccCCCcccccc---------------
Confidence 998888889999999886 8999999 8899999999999999999999987 5553322110
Q ss_pred ceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHH-HHhCCCCceeeccCCCCCcccchhhh
Q psy16545 409 PYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFE-RVTGKPVPYIFYNLGTGQGTSVLQLL 487 (600)
Q Consensus 409 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~ 487 (600)
...+...+. ...+++..+.+ |+|.++
T Consensus 189 --------------------------------------------~~~i~~~~~~~~~~~~~~i~~-----g~g~~~---- 215 (321)
T d1rpna_ 189 --------------------------------------------TRKVTDAVARIKLGKQQELRL-----GNVDAK---- 215 (321)
T ss_dssp --------------------------------------------HHHHHHHHHHHHTTSCSCEEE-----SCTTCE----
T ss_pred --------------------------------------------HHHHHHHHHHHHhCCCCcEEE-----CCCCeE----
Confidence 011122221 23344444432 556655
Q ss_pred hhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccc----ccc
Q psy16545 488 RTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPY----IVE 563 (600)
Q Consensus 488 ~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~----~~~ 563 (600)
|+|+| ++|+++++..++.++ ..+.||+++++..|+.++++.+.+..|.+.+. ...
T Consensus 216 r~~i~--------------------v~D~~~~~~~~~~~~-~~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (321)
T d1rpna_ 216 RDWGF--------------------AGDYVEAMWLMLQQD-KADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPA 274 (321)
T ss_dssp EECEE--------------------HHHHHHHHHHHHHSS-SCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGG
T ss_pred EccEE--------------------eHHHHHHHHHHHhcC-CcCCceecccccceehhhhHHHHHHhCCCccceeecCCC
Confidence 89999 999999999988765 35789999999999999999999999875332 223
Q ss_pred CCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 564 ARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 564 ~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
..++++...+.+|++|++++|||+|+++|+.+
T Consensus 275 ~~rp~~~~~~~~d~~k~~k~lG~~P~~~l~e~ 306 (321)
T d1rpna_ 275 FFRPAEVDVLLGNPAKAQRVLGWKPRTSLDEL 306 (321)
T ss_dssp GCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHH
T ss_pred CCCCCccCCccCCHHHHHHHHCCCcCCCHHHH
Confidence 34567778889999999999999999998753
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=3.7e-28 Score=245.18 Aligned_cols=202 Identities=21% Similarity=0.262 Sum_probs=159.9
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEEEc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHF 73 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~ 73 (600)
|||++|++|+++.+. |...+.+++++|+. .+|+.+.+.+.. ++. ++|+||||
T Consensus 6 VtG~sGfiG~~lv~~--L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---------~~~--~~d~Vihl 72 (312)
T d2b69a1 6 ITGGAGFVGSHLTDK--LMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP---------LYI--EVDQIYHL 72 (312)
T ss_dssp EETTTSHHHHHHHHH--HHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC---------CCC--CCSEEEEC
T ss_pred EECCCcHHHHHHHHH--HHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHH---------HHc--CCCEEEEC
Confidence 799999999999553 33345566654431 123333333333 333 79999999
Q ss_pred CcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCC-----CCCCCCCChHHHHHHH
Q psy16545 74 AAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITED-----HPTGNIKNVYGKTKHF 148 (600)
Q Consensus 74 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~-----~~~~~p~s~Y~~sK~~ 148 (600)
||......+..++...+++|+.|+.+|+++|++.++ |+||+||+++||.....+++|+ +|. .|.++|+.||.+
T Consensus 73 Aa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~-~p~~~Y~~sK~~ 150 (312)
T d2b69a1 73 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPI-GPRACYDEGKRV 150 (312)
T ss_dssp CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSS-STTHHHHHHHHH
T ss_pred cccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCC-CCccHHHHHHHH
Confidence 998876666778889999999999999999999987 8999999999998766666665 466 788999999999
Q ss_pred HHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeee
Q psy16545 149 IEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAID 228 (600)
Q Consensus 149 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~ 228 (600)
+|.+++.+++.+ +++++++||++||||+.... ...+++.+++.+. .+++++++|+|.+.|+++|++|+++
T Consensus 151 ~E~~~~~~~~~~-~~~~~~lR~~~vyGp~~~~~--------~~~~i~~~i~~~~-~g~~i~i~~~g~~~r~~i~v~D~~~ 220 (312)
T d2b69a1 151 AETMCYAYMKQE-GVEVRVARIFNTFGPRMHMN--------DGRVVSNFILQAL-QGEPLTVYGSGSQTRAFQYVSDLVN 220 (312)
T ss_dssp HHHHHHHHHHHH-CCCEEEEEECCEECTTCCTT--------CCCHHHHHHHHHH-HTCCEEEESSSCCEEECEEHHHHHH
T ss_pred HHHHHHHHHHHh-CCcEEEEEeeeEECCCCCCC--------CccHHHHHHHHHH-cCCCeEEeCCCCeeEccEEHHHHHH
Confidence 999999999887 99999999999999975421 2457887766665 4578999999999999999999999
Q ss_pred ccccccc
Q psy16545 229 NFVNSVH 235 (600)
Q Consensus 229 ~~~~a~~ 235 (600)
++..+++
T Consensus 221 ~~~~~~~ 227 (312)
T d2b69a1 221 GLVALMN 227 (312)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 8886653
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=3.3e-26 Score=234.23 Aligned_cols=250 Identities=16% Similarity=0.184 Sum_probs=196.6
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCC---CEEEEecCc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV---YQLVFSSSC 327 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~---~r~v~~SS~ 327 (600)
...++++.+|+.|...+..++...++++++|+|+......+..++...+++|+.||.+++++|+++++ ++|||+||.
T Consensus 55 ~~~~~~~~~Dl~d~~~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~ 134 (347)
T d1t2aa_ 55 EGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTS 134 (347)
T ss_dssp --CEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG
T ss_pred cCCcEEEEeecCCchhhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecch
Confidence 45789999999999999999988889999999998887778889999999999999999999999875 489999999
Q ss_pred ccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCC
Q psy16545 328 TVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNK 406 (600)
Q Consensus 328 ~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~ 406 (600)
+|||.....+++|++|..|. ++||.|| ..+|++++.+.+.++++++++|+++ +||+.+....
T Consensus 135 ~vyg~~~~~~~~E~~~~~P~-~~Yg~sK---~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~------------- 197 (347)
T d1t2aa_ 135 ELYGKVQEIPQKETTPFYPR-SPYGAAK---LYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFV------------- 197 (347)
T ss_dssp GGTCSCSSSSBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSH-------------
T ss_pred heecCCCCCCCCCCCCCCCC-CHHHHHH---HHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCcc-------------
Confidence 99998888899999999886 8999999 8899999999999999999999887 5553322110
Q ss_pred CcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHH-HHHhC-CCCceeeccCCCCCcccch
Q psy16545 407 PVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF-ERVTG-KPVPYIFYNLGTGQGTSVL 484 (600)
Q Consensus 407 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~ 484 (600)
...+...+ ....+ .+..+ .|++.+.
T Consensus 198 ----------------------------------------------~~~~~~~i~~~~~~~~~~~~------~g~g~~~- 224 (347)
T d1t2aa_ 198 ----------------------------------------------TRKISRSVAKIYLGQLECFS------LGNLDAK- 224 (347)
T ss_dssp ----------------------------------------------HHHHHHHHHHHHHTSCSCEE------ESCTTCE-
T ss_pred ----------------------------------------------ccccceeeehhhcCCcceee------cCCCcce-
Confidence 00111111 11222 23332 1455544
Q ss_pred hhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccccccc-
Q psy16545 485 QLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVE- 563 (600)
Q Consensus 485 ~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~- 563 (600)
|+|+| ++|++.++..++.+.. .+.|+++.+...++.+..+.+...++..+.....
T Consensus 225 ---r~~i~--------------------v~D~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (347)
T d1t2aa_ 225 ---RDWGH--------------------AKDYVEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKN 280 (347)
T ss_dssp ---ECCEE--------------------HHHHHHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCG
T ss_pred ---eeeeE--------------------ecHHHHHHHHHhhcCC-Cccceeccccccccchhhhhhhhhhcceeeecccc
Confidence 89988 9999999999887653 4689999999999999999999988864322111
Q ss_pred --------------------CCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 564 --------------------ARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 564 --------------------~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
..++.+...+.+|++|++++|||+|+++|+.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~skak~~Lgw~P~~sl~e 331 (347)
T d1t2aa_ 281 ENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDE 331 (347)
T ss_dssp GGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHH
T ss_pred hhhhhhhhhcCCceeeecccCCCCCCcCEeeECHHHHHHHHCCCcCCCHHH
Confidence 1234555667889999999999999999874
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.94 E-value=1.9e-26 Score=236.19 Aligned_cols=252 Identities=19% Similarity=0.258 Sum_probs=202.1
Q ss_pred HHhhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Q psy16545 246 IEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSS 325 (600)
Q Consensus 246 ~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~S 325 (600)
+..+.+.+++++.+|+.|...+..++. ..+.|+|+|+......+..++...++.|+.|+.+++++|+..+. ++|++|
T Consensus 46 ~~~~~~~~i~~~~~Di~d~~~~~~~~~--~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~s 122 (346)
T d1oc2a_ 46 LEAILGDRVELVVGDIADAELVDKLAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVS 122 (346)
T ss_dssp TGGGCSSSEEEEECCTTCHHHHHHHHT--TCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEE
T ss_pred HHHhhcCCeEEEEccCCCHHHHHHHHh--hhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccc
Confidence 345556789999999999999999988 78999999998877777789999999999999999999999984 899999
Q ss_pred CcccccCC------------CCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchH
Q psy16545 326 SCTVYGEP------------QFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSV 392 (600)
Q Consensus 326 S~~vYg~~------------~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~ 392 (600)
|+++||.. ....++|+++..|. ++||.+| ..+|.+++.+++.++++++++||++ +||++....
T Consensus 123 s~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~-s~Y~~sK---~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~ 198 (346)
T d1oc2a_ 123 TDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS-SPYSSTK---AASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEK 198 (346)
T ss_dssp EGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTS
T ss_pred cceEecccCccccccccccCcccccccCCCCCCC-CHHHHHH---HHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccc
Confidence 99999842 12346677777775 8999999 8899999999999999999999987 554332110
Q ss_pred HHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceee
Q psy16545 393 LQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIF 472 (600)
Q Consensus 393 ~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (600)
.+..++.. ...+.++++.
T Consensus 199 -----------------------------------------------------------~~~~~i~~--~~~~~~~~i~- 216 (346)
T d1oc2a_ 199 -----------------------------------------------------------FIPRQITN--ILAGIKPKLY- 216 (346)
T ss_dssp -----------------------------------------------------------HHHHHHHH--HHHTCCCEEE-
T ss_pred -----------------------------------------------------------hhHHHHHH--HHcCCceeEe-
Confidence 01111111 1236666552
Q ss_pred ccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhh
Q psy16545 473 YNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFER 552 (600)
Q Consensus 473 ~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~ 552 (600)
++|.+. |+|+| ++|+++++..+..++..++.||+++++..+..|+++.+.+
T Consensus 217 -----~~g~~~----r~~i~--------------------v~D~a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 267 (346)
T d1oc2a_ 217 -----GEGKNV----RDWIH--------------------TNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILE 267 (346)
T ss_dssp -----TTSCCE----EECEE--------------------HHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHH
T ss_pred -----CCCCcc----ccccc--------------------hhhHHHHHHHHHhhcccCccccccccccccchHHHHHHHH
Confidence 455545 99999 9999999999888877789999999999999999999999
Q ss_pred hcCCc-ccccccCCCCCCccccccChHHHHHHcCceeeE-EEEec
Q psy16545 553 VTGKP-VPYIVEARREGDIVSMYANTDLAQRELGWSARC-TVKIS 595 (600)
Q Consensus 553 ~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~-~l~~~ 595 (600)
.++.+ ..+...+.++++...+.+|++|++++|||+|++ +|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~P~~t~l~e~ 312 (346)
T d1oc2a_ 268 KMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEG 312 (346)
T ss_dssp HTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHH
T ss_pred HhCCCCcceEECCCCCCCCceeeeCHHHHHHHHCCCCcCCCHHHH
Confidence 99874 345666667777778889999999999999997 57653
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.93 E-value=9.7e-26 Score=232.32 Aligned_cols=249 Identities=16% Similarity=0.171 Sum_probs=190.2
Q ss_pred ceeEEEeecCChhhHHHHhhcCCccEEEEcccccCcccc-ccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGES-MQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~-~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
..++..+|+.+.+.+.++++ ++|+|+|+|+....... ...+......|+.++.+++++|++++++||||+||..+||
T Consensus 59 ~~~~~~~D~~~~~~~~~~~~--~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~ 136 (363)
T d2c5aa1 59 CDEFHLVDLRVMENCLKVTE--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYP 136 (363)
T ss_dssp CSEEEECCTTSHHHHHHHHT--TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSC
T ss_pred cCcEEEeechhHHHHHHHhh--cCCeEeecccccccccccccccccccccccchhhHHHHhHHhhCcccccccccccccc
Confidence 34788899999999988887 89999999976544332 4677889999999999999999999999999999999999
Q ss_pred CCCCCCCC-------CCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHh
Q psy16545 332 EPQFLPIT-------EDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVT 403 (600)
Q Consensus 332 ~~~~~~~~-------E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~ 403 (600)
.....+.+ |..|..|. ++||.+| ..+|.+++.+.+.++++++++||++ +|+++.....
T Consensus 137 ~~~~~~~~~~~~~~~e~~~~~p~-~~Yg~sK---~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~---------- 202 (363)
T d2c5aa1 137 EFKQLETTNVSLKESDAWPAEPQ-DAFGLEK---LATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGG---------- 202 (363)
T ss_dssp GGGSSSSSSCEECGGGGSSBCCS-SHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSS----------
T ss_pred ccccccccccccccccCCcCCCC-CHHHHHH---HHHHHHHHHHHHHhCCCEEEEEeeeEeccCCccccc----------
Confidence 76554443 33455564 8999999 8899999999999999999999987 5544321100
Q ss_pred CCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccc
Q psy16545 404 GNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSV 483 (600)
Q Consensus 404 g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 483 (600)
.+ ...............+... .++|.+.
T Consensus 203 ----------------------------------~~------------~~~~~~~~~~~~~~~~~~~------~g~g~~~ 230 (363)
T d2c5aa1 203 ----------------------------------RE------------KAPAAFCRKAQTSTDRFEM------WGDGLQT 230 (363)
T ss_dssp ----------------------------------CC------------CHHHHHHHHHHHCSSCEEE------ESCSCCE
T ss_pred ----------------------------------cc------------ccccccccccccccccccc------cCCCCeE
Confidence 00 0001111111112222222 2455555
Q ss_pred hhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccccccc
Q psy16545 484 LQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVE 563 (600)
Q Consensus 484 ~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~ 563 (600)
|+|+| ++|+++++..+++.. .+++||+++++.+|+.|+++++.+.+|.+.++...
T Consensus 231 ----rd~i~--------------------v~D~~~~~~~~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~ 285 (363)
T d2c5aa1 231 ----RSFTF--------------------IDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHI 285 (363)
T ss_dssp ----ECCEE--------------------HHHHHHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEE
T ss_pred ----EEEee--------------------hhHHHHHHHHHHhCC-CCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeC
Confidence 89999 888899988887654 57899999999999999999999999998888777
Q ss_pred CCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 564 ARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 564 ~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
+.+ .+.....+|++|++++|||+|+++||.+
T Consensus 286 ~~~-~~~~~~~~d~ska~~~LGw~p~~sleeg 316 (363)
T d2c5aa1 286 PGP-EGVRGRNSDNNLIKEKLGWAPNMRLKEG 316 (363)
T ss_dssp CCC-CCCSBCEECCHHHHHHHSCCCCCCHHHH
T ss_pred CCC-CCccccccCHHHHHHHhCCCCCCCHHHH
Confidence 654 4556778899999999999999998753
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.93 E-value=2.8e-26 Score=232.36 Aligned_cols=196 Identities=17% Similarity=0.191 Sum_probs=165.7
Q ss_pred CCCCcchHHHHHHHhhhcc------------------------------CCCccEEecccccccccChHHhhhHHhhhhc
Q psy16545 9 GTGQGTSVLQLLRTFERVT------------------------------GKPVPYIVEARREGDIVSMYANTDLAQKELG 58 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~------------------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 58 (600)
|||++|++|+++.+..... ..+++++ .+|+.+......
T Consensus 5 ItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~~~~~~~------- 72 (322)
T d1r6da_ 5 VTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV-----HGDIRDAGLLAR------- 72 (322)
T ss_dssp EETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEE-----ECCTTCHHHHHH-------
T ss_pred EECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEE-----Eeccccchhhhc-------
Confidence 7999999999996632111 1245566 777777776665
Q ss_pred ccccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 59 WSARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 59 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
... .+|+|+|+|+.........++...+++|+.|+.+|+++|.+.++++||++||+.+||.....+++|+++. .|
T Consensus 73 --~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~-~p 147 (322)
T d1r6da_ 73 --ELR--GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPL-EP 147 (322)
T ss_dssp --HTT--TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCC-CC
T ss_pred --ccc--ccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCC-CC
Confidence 433 7999999999877666667778899999999999999999999999999999999999888899999999 89
Q ss_pred CChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccc
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETE 218 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~ 218 (600)
.++||.||.++|.+++.+++++ +++++++||++||||... .+.+++.+.+.+. .+++++++|+|.+.|
T Consensus 148 ~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~vyGp~~~----------~~~~i~~~i~~~~-~~~~i~v~~~g~~~r 215 (322)
T d1r6da_ 148 NSPYAASKAGSDLVARAYHRTY-GLDVRITRCCNNYGPYQH----------PEKLIPLFVTNLL-DGGTLPLYGDGANVR 215 (322)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEECTTCC----------TTSHHHHHHHHHH-TTCCEEEETTSCCEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHh-CCCEEEEEeeeEECcCCC----------cCcHHHHHHHHHH-cCCCcEEecCCCeEE
Confidence 9999999999999999999887 999999999999999643 2457887777666 567899999999999
Q ss_pred cCcceEEeeeccccc
Q psy16545 219 DGTGKVVAIDNFVNS 233 (600)
Q Consensus 219 ~~~~v~d~v~~~~~a 233 (600)
+|+|++|+++++..+
T Consensus 216 ~~i~v~D~a~ai~~~ 230 (322)
T d1r6da_ 216 EWVHTDDHCRGIALV 230 (322)
T ss_dssp EEEEHHHHHHHHHHH
T ss_pred ccEEHHHHHHHHHHH
Confidence 999999999877655
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=1.8e-25 Score=228.05 Aligned_cols=205 Identities=47% Similarity=0.756 Sum_probs=170.3
Q ss_pred CCCCcchHHHHHHHhhhcc-------------------------CCCccEEecccccccccChHHhhhHHhhhhcccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVT-------------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~-------------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
|||++||+|+.+.+..... ..+++++ .+|++|.+.+.+ +++
T Consensus 5 ItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~l~~---------~~~ 70 (338)
T d1udca_ 5 VTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFV-----EGDIRNEALMTE---------ILH 70 (338)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEE-----ECCTTCHHHHHH---------HHH
T ss_pred EECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEE-----EeecCCHHHHHH---------HHh
Confidence 8999999999995532111 1235555 799999999988 666
Q ss_pred cCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHH
Q psy16545 64 THDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYG 143 (600)
Q Consensus 64 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~ 143 (600)
..++|+|||+||....+.+..++...+++|+.||.+|+++|++.+++++|++||..+|+.....+..|..+...|.++|+
T Consensus 71 ~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~ 150 (338)
T d1udca_ 71 DHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYG 150 (338)
T ss_dssp HTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHH
T ss_pred ccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHH
Confidence 56899999999987766666788899999999999999999999999999999999998766666655554437899999
Q ss_pred HHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcce
Q psy16545 144 KTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGK 223 (600)
Q Consensus 144 ~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v 223 (600)
.+|..+|+++..+..+..+++++++|++++|||++.+.++....+..+.+++.+.+.+.+..+++.++|++...+++.++
T Consensus 151 ~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~ 230 (338)
T d1udca_ 151 KSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230 (338)
T ss_dssp HHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCE
T ss_pred HHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCce
Confidence 99999999999877776689999999999999999988888887777889999999888888899999986666666666
Q ss_pred EEee
Q psy16545 224 VVAI 227 (600)
Q Consensus 224 ~d~v 227 (600)
+|++
T Consensus 231 rd~i 234 (338)
T d1udca_ 231 RDYI 234 (338)
T ss_dssp ECEE
T ss_pred eeEE
Confidence 6654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=1.4e-25 Score=229.20 Aligned_cols=256 Identities=16% Similarity=0.224 Sum_probs=190.2
Q ss_pred CCceeEEEeecCChhhHHH-HhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGE-IFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 329 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~-~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~v 329 (600)
.++++++.+|+++...+.+ ++. ++|+|||+|+.........++...+..|+.|+.+++++|.+.++ ++++.||+.+
T Consensus 44 ~~~~~~i~~Di~~~~~~~~~~~~--~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~ 120 (342)
T d2blla1 44 HPHFHFVEGDISIHSEWIEYHVK--KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEV 120 (342)
T ss_dssp CTTEEEEECCTTTCSHHHHHHHH--HCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGG
T ss_pred CCCeEEEECccCChHHHHHHHHh--CCCccccccccccccccccCCccccccccccccccccccccccc-cccccccccc
Confidence 4679999999998766665 444 79999999999887778889999999999999999999999986 7789999999
Q ss_pred ccCCCCCCCCCCCC------CCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHH
Q psy16545 330 YGEPQFLPITEDHP------TGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERV 402 (600)
Q Consensus 330 Yg~~~~~~~~E~~~------~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~ 402 (600)
|+.......+|..+ ...+.+.|+.|| ..+|.+++.+.+.++++++++|++. +|++....
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK---~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~----------- 186 (342)
T d2blla1 121 YGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK---QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNL----------- 186 (342)
T ss_dssp GBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCT-----------
T ss_pred cccccccccccccccccccccCCCcchhhhcc---cchhhhhhhhhcccCceeEEeecccccccccccc-----------
Confidence 99776555554432 222347899999 8899999999999999999999987 55432221
Q ss_pred hCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCccc
Q psy16545 403 TGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTS 482 (600)
Q Consensus 403 ~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 482 (600)
++++.. ....+..++..+ ..|+++.+. ++|.+
T Consensus 187 ------------~~~~~~----------------------------~~~~~~~~~~~~--~~g~~~~~~------~~g~~ 218 (342)
T d2blla1 187 ------------NAARIG----------------------------SSRAITQLILNL--VEGSPIKLI------DGGKQ 218 (342)
T ss_dssp ------------TCSBSC----------------------------BCHHHHHHHHHH--HHTCCEEEG------GGSCC
T ss_pred ------------cccccc----------------------------ccccchHHHHHH--HhCCCcccc------CCCCe
Confidence 122110 011122333333 237777662 45555
Q ss_pred chhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC---CceeEeEcCCCCC-ccHHHHHHHHhhhcCCcc
Q psy16545 483 VLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP---VPYIFYNLGTGQG-TSVLQLLRTFERVTGKPV 558 (600)
Q Consensus 483 ~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~---~~~~~~nl~~~~~-~s~~e~~~~~~~~~g~~~ 558 (600)
. |+|+| ++|+++++..+++++ ..+++||+++++. +|++|+++.+.+.+|...
T Consensus 219 ~----r~~i~--------------------v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~ 274 (342)
T d2blla1 219 K----RCFTD--------------------IRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP 274 (342)
T ss_dssp E----EECEE--------------------HHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCT
T ss_pred e----eeecc--------------------cccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCc
Confidence 5 89999 999999999988653 3479999998765 799999999999998654
Q ss_pred cccccCCC---------------CCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 559 PYIVEARR---------------EGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 559 ~~~~~~~~---------------~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
.....+.. ..++.+..+|++|++++|||+|+++++.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~P~~sleeg 326 (342)
T d2blla1 275 LRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQET 326 (342)
T ss_dssp TGGGSCCCCCEEEC------------CCCCCBCCHHHHHHHCCCCCCCHHHH
T ss_pred cccccCcccccceeccccccccccccccccccCHHHHHHHHCCCcCCCHHHH
Confidence 44433321 22345667899999999999999998753
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=2.7e-25 Score=224.29 Aligned_cols=251 Identities=19% Similarity=0.257 Sum_probs=189.8
Q ss_pred eecCChhhHHHHhhcCCccEEEEcccccCcc-ccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCCCC
Q psy16545 259 CDLVDKNRLGEIFAKHDIDCVIHFAAVKAVG-ESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLP 337 (600)
Q Consensus 259 ~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~-~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~~ 337 (600)
.|+.+...+.+++....+|.|+|+|+..+.. ....++.+++++|+.+|.+++++|++++++||||+||++|||.....+
T Consensus 38 ~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~ 117 (315)
T d1e6ua_ 38 LNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQP 117 (315)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSS
T ss_pred ccccCHHHHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCC
Confidence 4788888888888877899999999775432 234567788999999999999999999999999999999999888888
Q ss_pred CCCCCCCCC----CCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEE
Q psy16545 338 ITEDHPTGN----IKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIF 412 (600)
Q Consensus 338 ~~E~~~~~~----~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~ 412 (600)
++|+.+... +.++|+.|| ..+|++++.+.+.++++++++||++ +||++.....
T Consensus 118 ~~E~~~~~~~~~~~~~~Y~~sK---~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~------------------- 175 (315)
T d1e6ua_ 118 MAESELLQGTLEPTNEPYAIAK---IAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPS------------------- 175 (315)
T ss_dssp BCGGGTTSSCCCGGGHHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTT-------------------
T ss_pred ccCCccccCCCCCCCCHHHHHH---HHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCcc-------------------
Confidence 888876542 335799999 8899999999999999999999988 6654421100
Q ss_pred eeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhh
Q psy16545 413 YNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFER 492 (600)
Q Consensus 413 ~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~ 492 (600)
..++.. .+...........+.++.+ .++|.+. |+|+|
T Consensus 176 -------~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~------~g~g~~~----~~~~~ 212 (315)
T d1e6ua_ 176 -------NSHVIP--------------------------ALLRRFHEATAQKAPDVVV------WGSGTPM----REFLH 212 (315)
T ss_dssp -------CSSHHH--------------------------HHHHHHHHHHHHTCSEEEE------ESCSCCE----ECEEE
T ss_pred -------ccccce--------------------------eeeccchhhhhccCCceEE------cCCCceE----EEEEE
Confidence 000000 0000011111122333333 2555655 88988
Q ss_pred hcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC---------CceeEeEcCCCCCccHHHHHHHHhhhcCCccccccc
Q psy16545 493 VTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP---------VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVE 563 (600)
Q Consensus 493 v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~---------~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~ 563 (600)
+.|++.++...+... .....+|++++...++.++++++.+.+|.+..+.+.
T Consensus 213 --------------------v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~ 272 (315)
T d1e6ua_ 213 --------------------VDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFD 272 (315)
T ss_dssp --------------------HHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEE
T ss_pred --------------------eehhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEEC
Confidence 778888887766332 246789999999999999999999999998888888
Q ss_pred CCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 564 ARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 564 ~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
+.++.+.....+|++|+++ |||+|+++|+.+
T Consensus 273 ~~~~~~~~~~~~d~sk~k~-Lg~~p~~~l~e~ 303 (315)
T d1e6ua_ 273 ASKPDGTPRKLLDVTRLHQ-LGWYHEISLEAG 303 (315)
T ss_dssp TTSCCCCSBCCBCCHHHHH-TTCCCCCCHHHH
T ss_pred CCCCCCCceeccCHHHHHH-cCCCCCCCHHHH
Confidence 8888888888899999975 999999998753
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.92 E-value=2.6e-26 Score=236.32 Aligned_cols=199 Identities=18% Similarity=0.162 Sum_probs=162.4
Q ss_pred CCCCcchHHHHHHHhhhccC-------------------------CCccEEecccccccccChHHhhhHHhhhhcccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTG-------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
|||++|++|++|.+.....+ .+++++ .+|++|.+.+.+ +++
T Consensus 5 ItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~l~~---------~~~ 70 (361)
T d1kewa_ 5 ITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFE-----HADICDSAEITR---------IFE 70 (361)
T ss_dssp EESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEE-----ECCTTCHHHHHH---------HHH
T ss_pred EECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEE-----EccCCCHHHHHH---------HHH
Confidence 89999999999965331111 234555 789999999988 665
Q ss_pred cCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcC---------CCeEEEecCccccCCCCCCC------
Q psy16545 64 THDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG---------VYQLVFSSSCTVYGEPQFLP------ 128 (600)
Q Consensus 64 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---------~~r~I~~SS~~vyg~~~~~~------ 128 (600)
..++|+||||||......+..++...+++|+.||.+++++|++.+ +++||++||+.+||.....+
T Consensus 71 ~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~ 150 (361)
T d1kewa_ 71 QYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV 150 (361)
T ss_dssp HHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred hCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccccc
Confidence 557999999999987666677888999999999999999998764 35899999999998653222
Q ss_pred ----CCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCC
Q psy16545 129 ----ITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGS 204 (600)
Q Consensus 129 ----~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (600)
..|.++. .|.++||.||.++|.+++.+.+++ +++++++||++||||+.. .+.+++.+++.+. .
T Consensus 151 ~~~~~~e~~~~-~p~s~Yg~sK~~~E~~~~~~~~~~-~i~~~~lR~~~vyGp~~~----------~~~~i~~~i~~~~-~ 217 (361)
T d1kewa_ 151 TLPLFTETTAY-APSSPYSASKASSDHLVRAWRRTY-GLPTIVTNCSNNYGPYHF----------PEKLIPLVILNAL-E 217 (361)
T ss_dssp CCCCBCTTSCC-CCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEESTTCC----------TTSHHHHHHHHHH-H
T ss_pred CCCCcccCCCC-CCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEEecCceECcCCC----------cCcHHHHHHHHHH-c
Confidence 2466677 899999999999999999999887 999999999999999643 2457887777666 5
Q ss_pred CCeEEEecCCcccccCcceEEeeecccccc
Q psy16545 205 KPHFTVFGADYETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 205 ~~~~~v~g~g~~~~~~~~v~d~v~~~~~a~ 234 (600)
++++.++|+|.+.|+|+|++|+++++..++
T Consensus 218 g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~ 247 (361)
T d1kewa_ 218 GKPLPIYGKGDQIRDWLYVEDHARALHMVV 247 (361)
T ss_dssp TCCEEEETTSCCEEEEEEHHHHHHHHHHHH
T ss_pred CCCcEEeCCCCeEEeCEEHHHHHHHHHHHH
Confidence 578999999999999999999998776553
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.92 E-value=5.8e-26 Score=231.97 Aligned_cols=204 Identities=21% Similarity=0.239 Sum_probs=167.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------------cccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------------EGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------------~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
.|||++|++|+++.+.. ...+.+++++|+. .+|+.|...... .
T Consensus 20 LVTG~tGfIGs~lv~~L--~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~---------~ 88 (341)
T d1sb8a_ 20 LITGVAGFIGSNLLETL--LKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNN---------A 88 (341)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHH---------H
T ss_pred EEecCCCHHHHHHHHHH--HHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccc---------c
Confidence 47999999999996533 2333444444321 567777666555 3
Q ss_pred cccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 62 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
. .++++|+|+|+......+..++...+++|+.|+.+|+++|++.+++++|++||.++||.....|++|+++. .|.++
T Consensus 89 ~--~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~-~p~~~ 165 (341)
T d1sb8a_ 89 C--AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIG-KPLSP 165 (341)
T ss_dssp H--TTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCC-CCCSH
T ss_pred c--ccccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCC-CCCCc
Confidence 3 37899999999887666778889999999999999999999999999999999999998888899999999 99999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCc
Q psy16545 142 YGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGT 221 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~ 221 (600)
|+.||+++|++++.+++.+ +++++++||++||||+..+ .+....+++.+.+.+. .++++.++|+|.+.|+|+
T Consensus 166 Y~~sK~~~E~~~~~~~~~~-~i~~~ilR~~~v~G~~~~~------~~~~~~~i~~~~~~~~-~g~~i~~~g~g~~~r~~i 237 (341)
T d1sb8a_ 166 YAVTKYVNELYADVFSRCY-GFSTIGLRYFNVFGRRQDP------NGAYAAVIPKWTSSMI-QGDDVYINGDGETSRDFC 237 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHH-CCCCEEEEECCEECTTCCC------CSTTCCHHHHHHHHHH-HTCCCEEESSSCCEECCE
T ss_pred chHHHHHHHHHHHHHHHHh-CCCeEEEEeceeeccCcCC------CCchhhhHHHHHHHHH-cCCceEEcCCCCEEEEEE
Confidence 9999999999999999887 9999999999999996543 2234567887777666 457899999999999999
Q ss_pred ceEEeeeccccc
Q psy16545 222 GKVVAIDNFVNS 233 (600)
Q Consensus 222 ~v~d~v~~~~~a 233 (600)
|++|+++++..+
T Consensus 238 ~v~D~~~a~~~~ 249 (341)
T d1sb8a_ 238 YIENTVQANLLA 249 (341)
T ss_dssp EHHHHHHHHHHH
T ss_pred EEeccchhhhhh
Confidence 999998876544
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.2e-25 Score=230.11 Aligned_cols=207 Identities=17% Similarity=0.136 Sum_probs=167.7
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------------------cccccChHHhhhHHhhhhcccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------------EGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
|||++|++|+++.+.. ...+.+++++||. .+|++|.+.+.+ +
T Consensus 6 VTG~tGfIG~~l~~~L--l~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---------~ 74 (347)
T d1t2aa_ 6 ITGITGQDGSYLAEFL--LEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVK---------I 74 (347)
T ss_dssp EETTTSHHHHHHHHHH--HHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHH---------H
T ss_pred EecCCcHHHHHHHHHH--HHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHH---------H
Confidence 7999999999996532 2223334333331 679999999888 6
Q ss_pred cccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCC---CeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV---YQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 62 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~---~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
+...++++|+|+|+.........++..++++|+.||.+|+++|++.++ ++||++||+++||.....+++|+++. .|
T Consensus 75 ~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~-~P 153 (347)
T d1t2aa_ 75 INEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPF-YP 153 (347)
T ss_dssp HHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCC-CC
T ss_pred HhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCC-CC
Confidence 655689999999998776666677888899999999999999999865 48999999999998878899999999 89
Q ss_pred CChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccc
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETE 218 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~ 218 (600)
.++||.||+++|++++.+.+++ +++++++||+++|||.... ......+...+...+.+ ..++.++|+|.+.|
T Consensus 154 ~~~Yg~sK~~aE~~~~~~~~~~-~~~~~ilr~~~vyGp~~~~------~~~~~~~~~~i~~~~~~-~~~~~~~g~g~~~r 225 (347)
T d1t2aa_ 154 RSPYGAAKLYAYWIVVNFREAY-NLFAVNGILFNHESPRRGA------NFVTRKISRSVAKIYLG-QLECFSLGNLDAKR 225 (347)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTSCT------TSHHHHHHHHHHHHHHT-SCSCEEESCTTCEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHh-CCCEEEEEecceeCCCCCC------CccccccceeeehhhcC-CcceeecCCCccee
Confidence 9999999999999999998887 9999999999999995332 12234455666666664 45677789999999
Q ss_pred cCcceEEeeeccccccc
Q psy16545 219 DGTGKVVAIDNFVNSVH 235 (600)
Q Consensus 219 ~~~~v~d~v~~~~~a~~ 235 (600)
+++|++|+++++..++.
T Consensus 226 ~~i~v~D~~~a~~~~~~ 242 (347)
T d1t2aa_ 226 DWGHAKDYVEAMWLMLQ 242 (347)
T ss_dssp CCEEHHHHHHHHHHHHH
T ss_pred eeeEecHHHHHHHHHhh
Confidence 99999999988776643
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.91 E-value=1.7e-24 Score=225.47 Aligned_cols=273 Identities=21% Similarity=0.266 Sum_probs=192.6
Q ss_pred ccHHHHHhhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccC---hHHHHHHHHHHHHHHHHHHHHcC
Q psy16545 241 CSIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQE---PLMYYKNNLIATINLLEVMKSHG 317 (600)
Q Consensus 241 ~~l~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~---~~~~~~~Nv~gt~~ll~~~~~~~ 317 (600)
..+.....+.+++++++.+||.|.+.+.++++..++|+|||+||......+..+ +...+..|+.||.++|++|++.+
T Consensus 56 ~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~ 135 (393)
T d1i24a_ 56 DRISRWKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG 135 (393)
T ss_dssp HHHHHHHHHHCCCCEEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhcCCCcEEEEccCCCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhc
Confidence 445566777788999999999999999999998889999999998776666555 45678999999999999999987
Q ss_pred C-CEEEEecCcccccCCCCCCCCC--------------CCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeec
Q psy16545 318 V-YQLVFSSSCTVYGEPQFLPITE--------------DHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFY 382 (600)
Q Consensus 318 ~-~r~v~~SS~~vYg~~~~~~~~E--------------~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~ 382 (600)
+ ++++++||..+|+.... +..| ..+..|. ++|+.|| ..+|.+++.+.+.++++++++||+
T Consensus 136 ~~~~~i~~ss~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~-~~Y~~sK---~~aE~~~~~~~~~~~l~~~~lR~~ 210 (393)
T d1i24a_ 136 EECHLVKLGTMGEYGTPNI-DIEEGYITITHNGRTDTLPYPKQAS-SFYHLSK---VHDSHNIAFTCKAWGIRATDLNQG 210 (393)
T ss_dssp TTCEEEEECCGGGGCCCSS-CBCSSEEEEEETTEEEEEECCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred cccceeecccccccccccc-ccccccccccccccccccccccccc-cHHHHHh---hhhcccccccccccceeeeecccc
Confidence 6 46888888888875432 2221 1244454 8999999 889999999999999999999998
Q ss_pred c-cCCCCcchHHHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHH
Q psy16545 383 N-LGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFE 461 (600)
Q Consensus 383 ~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~ 461 (600)
+ +|+++..... .+...+.+ +...--...+..++..
T Consensus 211 ~v~G~~~~~~~~----------------------------------------~~~~~~~~--~~~~~~~~~i~~~~~~-- 246 (393)
T d1i24a_ 211 VVYGVKTDETEM----------------------------------------HEELRNRL--DYDAVFGTALNRFCVQ-- 246 (393)
T ss_dssp EEECSCCTTGGG----------------------------------------SGGGCCCC--CCSTTTCCHHHHHHHH--
T ss_pred cccCCCcccccc----------------------------------------cccccccc--ccccccccchhhhhHH--
Confidence 8 6665432210 00000000 0000000112223332
Q ss_pred HHhCCCCceeeccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEc--CCCC
Q psy16545 462 RVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNL--GTGQ 539 (600)
Q Consensus 462 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl--~~~~ 539 (600)
...++++++ + |++.+. |||+| |+|++.++..++++....+.+++ ++++
T Consensus 247 ~~~~~~~~i----~--g~~~~~----rd~v~--------------------v~D~~~a~~~~~~~~~~~g~~~~~~~~~~ 296 (393)
T d1i24a_ 247 AAVGHPLTV----Y--GKGGQT----RGYLD--------------------IRDTVQCVEIAIANPAKAGEFRVFNQFTE 296 (393)
T ss_dssp HHHTCCEEE----E--TTSCCE----EEEEE--------------------HHHHHHHHHHHHHSCCCTTCEEEEEECSE
T ss_pred hhcCCeeEE----e--eecccc----ccccc--------------------ccchHHHHHHHHHhhcccceeeeecCCCC
Confidence 245788877 2 555555 99999 89999999999876544333322 3456
Q ss_pred CccHHHHHHHHhhhc---CCccccc--ccCCCCCCccccccChHHHHHHcCceeeEEEE
Q psy16545 540 GTSVLQLLRTFERVT---GKPVPYI--VEARREGDIVSMYANTDLAQRELGWSARCTVK 593 (600)
Q Consensus 540 ~~s~~e~~~~~~~~~---g~~~~~~--~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~ 593 (600)
.+|++|+++++.+.. +.++... ..+.++.+...+..|++|+++ |||+|+++++
T Consensus 297 ~~si~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-LGw~P~~~~~ 354 (393)
T d1i24a_ 297 QFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLME-LGLEPHYLSD 354 (393)
T ss_dssp EEEHHHHHHHHHHHHHTTTCCCCEEEECCSSCSCSSCCCCBCCCHHHH-TTCCCCCCCH
T ss_pred eeEHHHHHHHHHHHHHhhCCCcceeeccCCCCCCCccEecCCHHHHHH-cCCccccCHH
Confidence 899999999998875 4333333 234456677788899999986 9999999875
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.91 E-value=2.2e-24 Score=219.79 Aligned_cols=250 Identities=17% Similarity=0.189 Sum_probs=195.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcC-----CCEEEEec
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHG-----VYQLVFSS 325 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-----~~r~v~~S 325 (600)
...++++.+|+.+...+.+.++..++|+|+|+|+......+..+|...+..|+.++.++++++++.+ ..+++++|
T Consensus 55 ~~~~~~~~~Di~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~s 134 (339)
T d1n7ha_ 55 KALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAG 134 (339)
T ss_dssp -CCEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_pred ccceEEEEccccCHHHHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecc
Confidence 4568899999999999999988778999999999987777778999999999999999999998642 35788888
Q ss_pred CcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhC
Q psy16545 326 SCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTG 404 (600)
Q Consensus 326 S~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g 404 (600)
|+.+|+... .+++|++|..|. +.|+.+| ..+|.++..+.+.++++++++||++ +||+.+....
T Consensus 135 s~~~~~~~~-~~~~E~~~~~p~-~~Y~~sK---~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~----------- 198 (339)
T d1n7ha_ 135 SSEMFGSTP-PPQSETTPFHPR-SPYAASK---CAAHWYTVNYREAYGLFACNGILFNHESPRRGENFV----------- 198 (339)
T ss_dssp EGGGGTTSC-SSBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSH-----------
T ss_pred cceecccCC-CCCCCCCCCCCc-chhhHHH---HHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCC-----------
Confidence 888887654 468999998885 8999999 8899999999999999999999988 5554322110
Q ss_pred CCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHH-HHHhCCCCceeeccCCCCCcccc
Q psy16545 405 NKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF-ERVTGKPVPYIFYNLGTGQGTSV 483 (600)
Q Consensus 405 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~ 483 (600)
...+...+ ....+....+.. |++.+.
T Consensus 199 ------------------------------------------------~~~i~~~~~~~~~~~~~~~~~-----g~~~~~ 225 (339)
T d1n7ha_ 199 ------------------------------------------------TRKITRALGRIKVGLQTKLFL-----GNLQAS 225 (339)
T ss_dssp ------------------------------------------------HHHHHHHHHHHHHTSCCCEEE-----SCTTCE
T ss_pred ------------------------------------------------cchhhHHHHHHhcCCCCeEEe-----CCCCcc
Confidence 01111111 222344433332 555555
Q ss_pred hhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCccc----
Q psy16545 484 LQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP---- 559 (600)
Q Consensus 484 ~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~---- 559 (600)
|||+| ++|+++++..++.++.. ..+++..+...++.++++++.+.+|....
T Consensus 226 ----rd~~~--------------------v~D~a~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 280 (339)
T d1n7ha_ 226 ----RDWGF--------------------AGDYVEAMWLMLQQEKP-DDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVE 280 (339)
T ss_dssp ----EECEE--------------------HHHHHHHHHHHHTSSSC-CEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEE
T ss_pred ----cccee--------------------eehHHHHHHHHHhcCCC-CccccccccccccchhhhhhhhhhhcccCceee
Confidence 89999 99999999999988644 45666778899999999999999997532
Q ss_pred ccccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 560 YIVEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 560 ~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+.....++++...+.+|++|++++|||+|+++||.
T Consensus 281 ~~~~~~r~~~~~~~~~d~~Kak~~LGw~P~~~le~ 315 (339)
T d1n7ha_ 281 IDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEK 315 (339)
T ss_dssp ECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHH
T ss_pred eccCCCCCCCCCeeeECHHHHHHHHCCCcCCCHHH
Confidence 23344567777888899999999999999999874
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=1e-24 Score=219.92 Aligned_cols=211 Identities=15% Similarity=0.128 Sum_probs=162.1
Q ss_pred CCCCcchHHHHHHHhhhccCCCccE-EecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcc-cCCCCh
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPY-IVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVG-ESMQEP 86 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~-~~~~~~ 86 (600)
|||++|++|++|.+ .|...+... +...+++.|+.+.+.+.+ ++...++|.|+|+|+..... ....++
T Consensus 7 ITG~tGfiG~~l~~--~L~~~g~~vi~~~~~~~~~~~~~~~~~~---------~~~~~~~d~v~~~a~~~~~~~~~~~~~ 75 (315)
T d1e6ua_ 7 IAGHRGMVGSAIRR--QLEQRGDVELVLRTRDELNLLDSRAVHD---------FFASERIDQVYLAAAKVGGIVANNTYP 75 (315)
T ss_dssp EETTTSHHHHHHHH--HHTTCTTEEEECCCTTTCCTTCHHHHHH---------HHHHHCCSEEEECCCCCCCHHHHHHCH
T ss_pred EEcCCcHHHHHHHH--HHHHCcCEEEEecCchhccccCHHHHHH---------HHhhcCCCEEEEcchhccccccchhhH
Confidence 89999999999965 444444433 444566899999999988 66656899999999876431 123556
Q ss_pred hhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCC----CCCChHHHHHHHHHHHHHHHHhhcCC
Q psy16545 87 LMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTG----NIKNVYGKTKHFIEEMLKDLSKAHKE 162 (600)
Q Consensus 87 ~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~----~p~s~Y~~sK~~~e~~~~~~~~~~~~ 162 (600)
..++++|+.||.+|+++|++.+++||||+||+++||.....+++|+.+.. .|.++|+.||.++|++++.+++++ +
T Consensus 76 ~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-g 154 (315)
T d1e6ua_ 76 ADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY-G 154 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH-C
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-C
Confidence 67889999999999999999999999999999999987777888875442 344679999999999999999888 9
Q ss_pred ceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 163 WNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 163 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
++++++||++||||+..... ........+..........+++++.++|+|.+.|+++|+.|+++++...
T Consensus 155 l~~~ilR~~~vyGp~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~ 223 (315)
T d1e6ua_ 155 RDYRSVMPTNLYGPHDNFHP--SNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHV 223 (315)
T ss_dssp CEEEEEEECEEESTTCCCCT--TCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHH
T ss_pred CCEEEEeeccEECCCCCCCc--cccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHh
Confidence 99999999999999754322 1111112222222222333668999999999999999999988776654
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1.1e-24 Score=222.76 Aligned_cols=213 Identities=47% Similarity=0.678 Sum_probs=173.6
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccc----------------------------ccccccChHHhhhHHhhhhccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEAR----------------------------REGDIVSMYANTDLAQKELGWS 60 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~----------------------------~~~Dl~~~~~~~~~~~~~~~~~ 60 (600)
|||++|++|++|.+.. ...+.+++++|+ -.+|++|.+.+.+
T Consensus 7 ITG~tGfIGs~lv~~L--l~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~--------- 75 (346)
T d1ek6a_ 7 VTGGAGYIGSHTVLEL--LEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQR--------- 75 (346)
T ss_dssp EETTTSHHHHHHHHHH--HHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHH---------
T ss_pred EECCCcHHHHHHHHHH--HHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccc---------
Confidence 8999999999995532 222223333221 0689999999888
Q ss_pred ccccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 61 ARCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 61 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
++....+++++|+||......+..++...+++|+.|+.+++++|++.++++||++||+.+||........+..+...+.+
T Consensus 76 ~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~ 155 (346)
T d1ek6a_ 76 LFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTN 155 (346)
T ss_dssp HHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSS
T ss_pred cccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCC
Confidence 55556789999999998776667788899999999999999999999999999999999998765444443333326889
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEec------CC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFG------AD 214 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g------~g 214 (600)
+|+.+|..+|+.++.+.+...+++.+++||+++|||.....+|+...+..+.+++.+.+.+.++++++.++| +|
T Consensus 156 ~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g 235 (346)
T d1ek6a_ 156 PYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG 235 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSS
T ss_pred hHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCC
Confidence 999999999999999887655899999999999999998888888888888899999888888888888876 57
Q ss_pred cccccCcceEEeeecccc
Q psy16545 215 YETEDGTGKVVAIDNFVN 232 (600)
Q Consensus 215 ~~~~~~~~v~d~v~~~~~ 232 (600)
.+.|||+|+.|++.++..
T Consensus 236 ~~~Rdfi~v~D~a~~~~~ 253 (346)
T d1ek6a_ 236 TGVRDYIHVVDLAKGHIA 253 (346)
T ss_dssp SCEECEEEHHHHHHHHHH
T ss_pred CeeEeEEEEEeccchhhh
Confidence 788899999998766554
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.90 E-value=4.8e-24 Score=216.81 Aligned_cols=255 Identities=20% Similarity=0.254 Sum_probs=192.3
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCc-cc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSC-TV 329 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~-~v 329 (600)
..+++++.+|+.+.+.+.++++..++|+|||+|+.........++...+++|+.||.+||++|.+.+++++|+.||+ ++
T Consensus 48 ~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~ 127 (338)
T d1orra_ 48 LGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKV 127 (338)
T ss_dssp TCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred cCCcEEEEcccCCHHHHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccc
Confidence 35789999999999999999987789999999999877777789999999999999999999999988766665554 55
Q ss_pred ccCCCCCC----------------CCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchH
Q psy16545 330 YGEPQFLP----------------ITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSV 392 (600)
Q Consensus 330 Yg~~~~~~----------------~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~ 392 (600)
|+.....+ ..+..+..|. +.|+.+| ...|.++..+.+.++...+.+|+++ +++.....
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~y~~~k---~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 202 (338)
T d1orra_ 128 YGDLEQYKYNETETRYTCVDKPNGYDESTQLDFH-SPYGCSK---GAADQYMLDYARIFGLNTVVFRHSSMYGGRQFAT- 202 (338)
T ss_dssp GTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCC-HHHHHHH---HHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCB-
T ss_pred cccccccccccccccccccccccCcccCCccccc-ccccccc---chhhhhhhhhhhccCcccccccccceeecccccc-
Confidence 55433222 2233344454 7899999 8899999999999999999999877 33221110
Q ss_pred HHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHH-HHH--hCCCCc
Q psy16545 393 LQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTF-ERV--TGKPVP 469 (600)
Q Consensus 393 ~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~-~~~--~~~~~~ 469 (600)
. ....+..++..+ ... .+++++
T Consensus 203 -------------------------~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 227 (338)
T d1orra_ 203 -------------------------Y------------------------------DQGWVGWFCQKAVEIKNGINKPFT 227 (338)
T ss_dssp -------------------------T------------------------------TBCHHHHHHHHHHHHHTTCCCCEE
T ss_pred -------------------------c------------------------------cccccchhhHHHHHHHhccCCceE
Confidence 0 000011122222 112 244555
Q ss_pred eeeccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC--CceeEeEcC--CCCCccHHH
Q psy16545 470 YIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP--VPYIFYNLG--TGQGTSVLQ 545 (600)
Q Consensus 470 ~~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~--~~~~~~nl~--~~~~~s~~e 545 (600)
+ .|+|.+. |+|+| ++|+++++..++++. ..+++||+. .+..+++.|
T Consensus 228 ~------~g~g~~~----r~~~~--------------------v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e 277 (338)
T d1orra_ 228 I------SGNGKQV----RDVLH--------------------AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLE 277 (338)
T ss_dssp E------ESSSCCE----EECEE--------------------HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHH
T ss_pred E------eCCCcee----Eeeec--------------------ccchhhHHHHHHhccccccCccccccccccccccHHH
Confidence 4 2555555 89999 889999998887653 347899984 456789999
Q ss_pred HHHHHhhhcCCcccccccCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 546 LLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 546 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
+++.+.+.+|.+.++...+.++++...+.+|++|++++|||+|+++|+.+
T Consensus 278 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~~sl~e~ 327 (338)
T d1orra_ 278 LFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDG 327 (338)
T ss_dssp HHHHHHHHHTCCCCEEEECCCSSCCSEECBCCHHHHHHHCCCCCSCHHHH
T ss_pred HHHHHHHHHCCCceeEeCCCCCCCcCeeeECHHHHHHHHCCCcCCCHHHH
Confidence 99999999999888888888888888889999999999999999998753
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.89 E-value=9e-24 Score=213.52 Aligned_cols=206 Identities=16% Similarity=0.094 Sum_probs=165.8
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccCCC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTHDI 67 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 67 (600)
|||++|++|+++.+.. ...+.++++++|. .+|++|.+.+.+ .+....+
T Consensus 5 ItG~tGfiG~~l~~~L--l~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~---------~~~~~~~ 73 (321)
T d1rpna_ 5 VTGITGQDGAYLAKLL--LEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQR---------AVIKAQP 73 (321)
T ss_dssp EETTTSHHHHHHHHHH--HHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHH---------HHHHHCC
T ss_pred EECCCCHHHHHHHHHH--HHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhh---------hhccccc
Confidence 7999999999996532 2223333333331 689999888888 5554578
Q ss_pred CEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCC-CeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHH
Q psy16545 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV-YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTK 146 (600)
Q Consensus 68 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK 146 (600)
++++|+|+.........++..+++.|+.|+.+++++|++.++ ++|++.||..+||.....+.+|+++. .|.++|+.||
T Consensus 74 ~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~-~p~~~Y~~sK 152 (321)
T d1rpna_ 74 QEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPF-YPRSPYGVAK 152 (321)
T ss_dssp SEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCC-CCCSHHHHHH
T ss_pred cccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCc-cccChhHHHH
Confidence 999999998877666788889999999999999999999875 47888899999988887888999999 8999999999
Q ss_pred HHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEe
Q psy16545 147 HFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVA 226 (600)
Q Consensus 147 ~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~ 226 (600)
.++|++++.+++.+ +++++++||+++|||.... +...+.++..+.+.+.++. +...+|+|.+.|+|+|++|+
T Consensus 153 ~~~E~~~~~~~~~~-~~~~~~lr~~~vyGp~~~~------~~~~~~i~~~~~~~~~~~~-~~i~~g~g~~~r~~i~v~D~ 224 (321)
T d1rpna_ 153 LYGHWITVNYRESF-GLHASSGILFNHESPLRGI------EFVTRKVTDAVARIKLGKQ-QELRLGNVDAKRDWGFAGDY 224 (321)
T ss_dssp HHHHHHHHHHHHHH-CCCEEEEEECCEECTTSCT------TSHHHHHHHHHHHHHTTSC-SCEEESCTTCEEECEEHHHH
T ss_pred HHHHHHHHHHHhhc-CCcEEEEEEecccCCCccc------cccHHHHHHHHHHHHhCCC-CcEEECCCCeEEccEEeHHH
Confidence 99999999999887 9999999999999996321 2223456778888777554 44458999999999999999
Q ss_pred eecccccc
Q psy16545 227 IDNFVNSV 234 (600)
Q Consensus 227 v~~~~~a~ 234 (600)
++.+..++
T Consensus 225 ~~~~~~~~ 232 (321)
T d1rpna_ 225 VEAMWLML 232 (321)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98776553
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.88 E-value=3.3e-23 Score=211.78 Aligned_cols=201 Identities=17% Similarity=0.143 Sum_probs=156.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccc--------------------ccccccChHHhhhHHhhhhcccccccCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEAR--------------------REGDIVSMYANTDLAQKELGWSARCTHDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~--------------------~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 67 (600)
.|||++|++|+++.+.....+..++++.+|. -.+|+.|.+.+.. ++. +.
T Consensus 6 LVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~---------~~~--~~ 74 (346)
T d1oc2a_ 6 IVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDK---------LAA--KA 74 (346)
T ss_dssp EEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHH---------HHT--TC
T ss_pred EEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHH---------HHh--hh
Confidence 3899999999999553321222223332221 0699999998888 665 78
Q ss_pred CEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCC------------CCCCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEP------------QFLPITEDHPT 135 (600)
Q Consensus 68 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~------------~~~~~~E~~~~ 135 (600)
+.|+|+|+......+..++...+++|+.|+.+|+++|.+.+. ++|++||+.+||.. .....+|+++.
T Consensus 75 ~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~ 153 (346)
T d1oc2a_ 75 DAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNY 153 (346)
T ss_dssp SEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCC
T ss_pred hhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccccCCCC
Confidence 999999998876666678889999999999999999999986 89999999999742 12346777888
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCc
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADY 215 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~ 215 (600)
.|.++||.+|+++|.+++.+++++ +++++++||++||||+... ...+...+.+... ++++.++|+|.
T Consensus 154 -~p~s~Y~~sK~~~E~~~~~~~~~~-~i~~~ilR~~~vyGp~~~~---------~~~~~~~i~~~~~--~~~~~i~~~g~ 220 (346)
T d1oc2a_ 154 -NPSSPYSSTKAASDLIVKAWVRSF-GVKATISNCSNNYGPYQHI---------EKFIPRQITNILA--GIKPKLYGEGK 220 (346)
T ss_dssp -CCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEESTTCCT---------TSHHHHHHHHHHH--TCCCEEETTSC
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHc-CCCEEEEeecceeCCCCCc---------cchhHHHHHHHHc--CCceeEeCCCC
Confidence 899999999999999999999887 9999999999999996431 1234445555554 35678899999
Q ss_pred ccccCcceEEeeeccccc
Q psy16545 216 ETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 216 ~~~~~~~v~d~v~~~~~a 233 (600)
+.|+++|++|+++++..+
T Consensus 221 ~~r~~i~v~D~a~a~~~~ 238 (346)
T d1oc2a_ 221 NVRDWIHTNDHSTGVWAI 238 (346)
T ss_dssp CEEECEEHHHHHHHHHHH
T ss_pred ccccccchhhHHHHHHHH
Confidence 999999999998876544
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.88 E-value=6.8e-23 Score=213.16 Aligned_cols=187 Identities=20% Similarity=0.198 Sum_probs=143.8
Q ss_pred CccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCC---hhhhHHhHHHHHHHHHHHHHH
Q psy16545 30 PVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQE---PLMYYKNNLIATINLLEVMKS 106 (600)
Q Consensus 30 ~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~---~~~~~~~Nv~gt~~ll~a~~~ 106 (600)
+++++ .+||+|.+.+.+ ++...++|+|||+||......+..+ +...+++|+.||.+++++|++
T Consensus 68 ~i~~~-----~~Dl~d~~~l~~---------~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~ 133 (393)
T d1i24a_ 68 SIELY-----VGDICDFEFLAE---------SFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKE 133 (393)
T ss_dssp CCEEE-----ESCTTSHHHHHH---------HHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEE-----EccCCCHHHHHH---------HHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHH
Confidence 45566 899999999999 6665689999999998765544444 446789999999999999999
Q ss_pred cCCC-eEEEecCccccCCCCCCCCC--------------CCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecc
Q psy16545 107 HGVY-QLVFSSSCTVYGEPQFLPIT--------------EDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYF 171 (600)
Q Consensus 107 ~~~~-r~I~~SS~~vyg~~~~~~~~--------------E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~ 171 (600)
.+++ ++++.||..+|+... .+.. |..+. .|.++|+.||+++|.+++.+++++ +++++++||+
T Consensus 134 ~~~~~~~i~~ss~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~p~~~Y~~sK~~aE~~~~~~~~~~-~l~~~~lR~~ 210 (393)
T d1i24a_ 134 FGEECHLVKLGTMGEYGTPN-IDIEEGYITITHNGRTDTLPYPK-QASSFYHLSKVHDSHNIAFTCKAW-GIRATDLNQG 210 (393)
T ss_dssp HCTTCEEEEECCGGGGCCCS-SCBCSSEEEEEETTEEEEEECCC-CCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEEC
T ss_pred hccccceeeccccccccccc-ccccccccccccccccccccccc-ccccHHHHHhhhhccccccccccc-ceeeeecccc
Confidence 8764 678888888887533 2222 22356 788999999999999999999887 9999999999
Q ss_pred cccCCCCCCCC-------CCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeecccccc
Q psy16545 172 NPVGAHPSGRI-------GEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 172 ~v~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a~ 234 (600)
+||||...+.- +.+..+....+++.+.+... .+++++++|+|.+.|||+|++|+++++..++
T Consensus 211 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~ 279 (393)
T d1i24a_ 211 VVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAA-VGHPLTVYGKGGQTRGYLDIRDTVQCVEIAI 279 (393)
T ss_dssp EEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHH-HTCCEEEETTSCCEEEEEEHHHHHHHHHHHH
T ss_pred cccCCCccccccccccccccccccccccchhhhhHHhh-cCCeeEEeeecccccccccccchHHHHHHHH
Confidence 99999754221 12233334556665555554 5578999999999999999999998777664
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.87 E-value=5.2e-23 Score=209.41 Aligned_cols=206 Identities=17% Similarity=0.079 Sum_probs=161.2
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------------------cccccChHHhhhHHhhhhcccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------------EGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
|||++|++|++|.+ .|...+.+++++||. .+|+.+.+.+.+ .
T Consensus 6 VTGatGfiG~~lv~--~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~---------~ 74 (339)
T d1n7ha_ 6 ITGITGQDGSYLTE--FLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRR---------W 74 (339)
T ss_dssp EETTTSHHHHHHHH--HHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHH---------H
T ss_pred EeCCccHHHHHHHH--HHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHH---------H
Confidence 79999999999965 333345555555542 478888888887 5
Q ss_pred cccCCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc-----CCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 62 RCTHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-----GVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 62 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-----~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
+...++|+|||+||.........++...+.+|+.++.++++++++. ...++++.||+.+|+.. ..+++|++|.
T Consensus 75 ~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~-~~~~~E~~~~- 152 (339)
T d1n7ha_ 75 IDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-PPPQSETTPF- 152 (339)
T ss_dssp HHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS-CSSBCTTSCC-
T ss_pred HhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC-CCCCCCCCCC-
Confidence 5556899999999998766666788899999999999999998764 23578888888887654 3678999999
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcc
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYE 216 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~ 216 (600)
.|.++|+.||+.+|+++..+.+.+ +++++++||++||||.... +.....+...+.+...+. .+..++|+|.+
T Consensus 153 ~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~vyGp~~~~------~~~~~~i~~~~~~~~~~~-~~~~~~g~~~~ 224 (339)
T d1n7ha_ 153 HPRSPYAASKCAAHWYTVNYREAY-GLFACNGILFNHESPRRGE------NFVTRKITRALGRIKVGL-QTKLFLGNLQA 224 (339)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTSCT------TSHHHHHHHHHHHHHHTS-CCCEEESCTTC
T ss_pred CCcchhhHHHHHHHHHHHHHHHHh-CCCEEEEEEccccCCCCCC------CCCcchhhHHHHHHhcCC-CCeEEeCCCCc
Confidence 899999999999999999999887 9999999999999996332 112344555566666544 44556799999
Q ss_pred cccCcceEEeeeccccccc
Q psy16545 217 TEDGTGKVVAIDNFVNSVH 235 (600)
Q Consensus 217 ~~~~~~v~d~v~~~~~a~~ 235 (600)
.|+++|++|+++.+..++.
T Consensus 225 ~rd~~~v~D~a~~~~~~~~ 243 (339)
T d1n7ha_ 225 SRDWGFAGDYVEAMWLMLQ 243 (339)
T ss_dssp EEECEEHHHHHHHHHHHHT
T ss_pred cccceeeehHHHHHHHHHh
Confidence 9999999998886665533
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.87 E-value=3e-22 Score=205.92 Aligned_cols=209 Identities=17% Similarity=0.180 Sum_probs=158.4
Q ss_pred cccccCCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCC
Q psy16545 4 KFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDID 68 (600)
Q Consensus 4 ~~~~~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d 68 (600)
||.=.|||++||+|+++.+. |...+.+++++|+. .+|+.+.+.+.+ +++ ++|
T Consensus 15 nMKILVTGgsGfIGs~lv~~--L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---------~~~--~~d 81 (363)
T d2c5aa1 15 NLKISITGAGGFIASHIARR--LKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLK---------VTE--GVD 81 (363)
T ss_dssp CCEEEEETTTSHHHHHHHHH--HHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHH---------HHT--TCS
T ss_pred CCEEEEECCCCHHHHHHHHH--HHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHH---------Hhh--cCC
Confidence 33346999999999999553 33334455555443 467777777776 555 799
Q ss_pred EEEEcCcccCccc-CCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCC-------CCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE-SMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPI-------TEDHPTGNIKN 140 (600)
Q Consensus 69 ~Vih~A~~~~~~~-~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~-------~E~~~~~~p~s 140 (600)
+|||+|+...... ....+...+.+|+.++.+++++|++.++++||++||..+|+.....+. .|..+. .|.+
T Consensus 82 ~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~-~p~~ 160 (363)
T d2c5aa1 82 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPA-EPQD 160 (363)
T ss_dssp EEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSB-CCSS
T ss_pred eEeecccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcC-CCCC
Confidence 9999998765422 246778899999999999999999999999999999999986554443 345577 7899
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDG 220 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~ 220 (600)
+||.||+++|++++.+.+++ +++++++||+++|||........ .......+..... ...+...+|+|.+.|+|
T Consensus 161 ~Yg~sK~~~E~~~~~~~~~~-gl~~~ilR~~~vyG~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~g~g~~~rd~ 233 (363)
T d2c5aa1 161 AFGLEKLATEELCKHYNKDF-GIECRIGRFHNIYGPFGTWKGGR-----EKAPAAFCRKAQT-STDRFEMWGDGLQTRSF 233 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTSCCSSSC-----CCHHHHHHHHHHH-CSSCEEEESCSCCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHh-CCCEEEEEeeeEeccCCcccccc-----ccccccccccccc-ccccccccCCCCeEEEE
Confidence 99999999999999999887 99999999999999975433211 1223334444343 55677889999999999
Q ss_pred cceEEeeeccccc
Q psy16545 221 TGKVVAIDNFVNS 233 (600)
Q Consensus 221 ~~v~d~v~~~~~a 233 (600)
+|+.|+++.+...
T Consensus 234 i~v~D~~~~~~~~ 246 (363)
T d2c5aa1 234 TFIDECVEGVLRL 246 (363)
T ss_dssp EEHHHHHHHHHHH
T ss_pred eehhHHHHHHHHH
Confidence 9999988755433
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=3.9e-22 Score=203.27 Aligned_cols=209 Identities=13% Similarity=0.106 Sum_probs=157.2
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHHhhhHHhhhhcccccccCCCCEEEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIH 72 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih 72 (600)
|||++|++|+++.+.....+ ..+++++|+. .+|+++.+.+.+. +.. ++|+|||
T Consensus 5 ITG~tGfiG~~l~~~Ll~~g-~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~--------~~~--~~d~Vih 73 (342)
T d2blla1 5 ILGVNGFIGNHLTERLLRED-HYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEY--------HVK--KCDVVLP 73 (342)
T ss_dssp EETCSSHHHHHHHHHHHHST-TCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHH--------HHH--HCSEEEE
T ss_pred EECCCcHHHHHHHHHHHHCC-CCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHH--------HHh--CCCcccc
Confidence 79999999999955321111 1233333331 6788877665551 222 6999999
Q ss_pred cCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCC-------CCCCCCCChHHHH
Q psy16545 73 FAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITED-------HPTGNIKNVYGKT 145 (600)
Q Consensus 73 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~-------~~~~~p~s~Y~~s 145 (600)
+|+.........++...+++|+.|+.+++++|.+.++ ++++.||+.+|+.......+|. ... .|.+.|+.|
T Consensus 74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~Y~~s 151 (342)
T d2blla1 74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVN-KPRWIYSVS 151 (342)
T ss_dssp CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTT-CGGGHHHHH
T ss_pred ccccccccccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccC-CCcchhhhc
Confidence 9999876666677888999999999999999999987 6789999999987655544443 233 567889999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEE
Q psy16545 146 KHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVV 225 (600)
Q Consensus 146 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d 225 (600)
|..+|++++.+++++ +++++++|++.+|||.....++.... ...+++.+...+. .++++.++|+|.+.|+++|++|
T Consensus 152 K~~~E~~~~~~~~~~-~~~~~i~r~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~-~g~~~~~~~~g~~~r~~i~v~D 227 (342)
T d2blla1 152 KQLLDRVIWAYGEKE-GLQFTLFRPFNWMGPRLDNLNAARIG--SSRAITQLILNLV-EGSPIKLIDGGKQKRCFTDIRD 227 (342)
T ss_dssp HHHHHHHHHHHHHHH-CCCEEEEEECSEECSSCCCTTCSBSC--BCHHHHHHHHHHH-HTCCEEEGGGSCCEEECEEHHH
T ss_pred ccchhhhhhhhhccc-CceeEEeecccccccccccccccccc--ccccchHHHHHHH-hCCCccccCCCCeeeeeccccc
Confidence 999999999999887 99999999999999987665544432 2334554444444 3468899999999999999999
Q ss_pred eeecccccc
Q psy16545 226 AIDNFVNSV 234 (600)
Q Consensus 226 ~v~~~~~a~ 234 (600)
+++++..++
T Consensus 228 ~~~a~~~~~ 236 (342)
T d2blla1 228 GIEALYRII 236 (342)
T ss_dssp HHHHHHHHH
T ss_pred ccceeeeeh
Confidence 998777553
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.84 E-value=4.7e-21 Score=198.34 Aligned_cols=182 Identities=31% Similarity=0.502 Sum_probs=141.8
Q ss_pred cccccChHHhhhHHhhhhcccccccC-CCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCc
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSC 118 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~ 118 (600)
.+|++|.+.+.+ +++.. ++|+|||+|+.........++...+++|+.++.+++++|++.+++++++.||.
T Consensus 75 ~~Di~d~~~l~~---------~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~ 145 (383)
T d1gy8a_ 75 VGDVRNEDFLNG---------VFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSA 145 (383)
T ss_dssp ESCTTCHHHHHH---------HHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred ECcccCHHHhhh---------hhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccc
Confidence 789999999888 44332 57999999998876656677788999999999999999999999999999999
Q ss_pred cccCCCC-------CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCccc
Q psy16545 119 TVYGEPQ-------FLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFT 191 (600)
Q Consensus 119 ~vyg~~~-------~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~ 191 (600)
.+|+... ..++.|+++. .|.++|+.||+.+|++++.+.+.+ +++++++||+++|||.....+.....+ ..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~e~~~~-~p~~~Y~~sK~~~e~~~~~~~~~~-gl~~~~lR~~~vyG~~~~~~~~~~~~~-~~ 222 (383)
T d1gy8a_ 146 AIFGNPTMGSVSTNAEPIDINAKK-SPESPYGESKLIAERMIRDCAEAY-GIKGICLRYFNACGAHEDGDIGEHYQG-ST 222 (383)
T ss_dssp GGTBSCCC-----CCCCBCTTSCC-BCSSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECCCTTSSCSCCSTT-CC
T ss_pred ccccccccccccccccccccccCC-CCCCHHHhhHhHHHHHHHHHHHHh-CCCEEEEecceeeccCccccccccccc-cc
Confidence 9987442 2457788888 899999999999999999999887 999999999999999876544222222 23
Q ss_pred chhHHHHHhhc---------------CCCCeEEEec------CCcccccCcceEEeeeccccc
Q psy16545 192 NIMPYLAQVAI---------------GSKPHFTVFG------ADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 192 ~~~~~~~~~~~---------------~~~~~~~v~g------~g~~~~~~~~v~d~v~~~~~a 233 (600)
.++|.+...+. ..+++++++| ||.+.|||+|++|+++++..+
T Consensus 223 ~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~ 285 (383)
T d1gy8a_ 223 HLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILA 285 (383)
T ss_dssp SHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHH
Confidence 45554432221 1345677776 488888899999888776654
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.83 E-value=5.7e-21 Score=193.72 Aligned_cols=210 Identities=20% Similarity=0.195 Sum_probs=157.2
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccCCC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTHDI 67 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 67 (600)
|||++|++|+++.+. |...+.+++++|+- .+|+++.+.+.+ +++..++
T Consensus 5 VTGatGfIGs~lv~~--Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~---------~~~~~~~ 73 (338)
T d1orra_ 5 ITGGCGFLGSNLASF--ALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTR---------LITKYMP 73 (338)
T ss_dssp EETTTSHHHHHHHHH--HHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHH---------HHHHHCC
T ss_pred EECCCcHHHHHHHHH--HHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHH---------HHHhcCC
Confidence 799999999999552 22223333333210 689999999988 6655578
Q ss_pred CEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccc-cCCCCCCC----------------CC
Q psy16545 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV-YGEPQFLP----------------IT 130 (600)
Q Consensus 68 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~v-yg~~~~~~----------------~~ 130 (600)
|+|||+|+.........++...+++|+.||.+|+++|++.+++++|+.||+.. ++.....+ ..
T Consensus 74 d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T d1orra_ 74 DSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYD 153 (338)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBC
T ss_pred ceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcc
Confidence 99999999987655567888999999999999999999998877666666544 44332221 23
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEE
Q psy16545 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTV 210 (600)
Q Consensus 131 E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 210 (600)
+..+. .|.+.|+.+|...|.++......+ +....++|++++||+...+ ....+....++..+.+...+.++++++
T Consensus 154 ~~~~~-~~~~~y~~~k~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (338)
T d1orra_ 154 ESTQL-DFHSPYGCSKGAADQYMLDYARIF-GLNTVVFRHSSMYGGRQFA---TYDQGWVGWFCQKAVEIKNGINKPFTI 228 (338)
T ss_dssp TTSCC-CCCHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTCCC---BTTBCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred cCCcc-ccccccccccchhhhhhhhhhhcc-Ccccccccccceeeccccc---cccccccchhhHHHHHHHhccCCceEE
Confidence 44556 688999999999999999988887 9999999999999886442 222222334444445555567789999
Q ss_pred ecCCcccccCcceEEeeecccccc
Q psy16545 211 FGADYETEDGTGKVVAIDNFVNSV 234 (600)
Q Consensus 211 ~g~g~~~~~~~~v~d~v~~~~~a~ 234 (600)
+|+|.+.|+|+|++|+++++..++
T Consensus 229 ~g~g~~~r~~~~v~D~~~~~~~~l 252 (338)
T d1orra_ 229 SGNGKQVRDVLHAEDMISLYFTAL 252 (338)
T ss_dssp ESSSCCEEECEEHHHHHHHHHHHH
T ss_pred eCCCceeEeeecccchhhHHHHHH
Confidence 999999999999999998777553
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.82 E-value=1.9e-20 Score=191.50 Aligned_cols=250 Identities=18% Similarity=0.251 Sum_probs=177.4
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCC-CEEEEecCcccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV-YQLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~r~v~~SS~~vY 330 (600)
+.++++.+|+.|++.+.++++...+++|+|+|+......+..++...+.+|+.++.+++++|++.+. +.++++||..+|
T Consensus 56 ~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~ 135 (356)
T d1rkxa_ 56 DGMQSEIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCY 135 (356)
T ss_dssp TTSEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGB
T ss_pred cCCeEEEeeccChHhhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccc
Confidence 4689999999999999999988889999999999887778889999999999999999999999864 566666666655
Q ss_pred cCC-CCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---------hCCCCeeEeecccCCCCcchHHHHHHHHH
Q psy16545 331 GEP-QFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---------TGNKPVPYIFYNLGTGQGTSVLQLLRTFE 400 (600)
Q Consensus 331 g~~-~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---------~~~~~~~~r~~~~g~~~~~~~~~~~~~~~ 400 (600)
+.. ...+.+|+.+..|. ++|+.+| ...|..+..+... +++.++++||+++
T Consensus 136 ~~~~~~~~~~~~~~~~p~-~~y~~~k---~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~v---------------- 195 (356)
T d1rkxa_ 136 DNKEWIWGYRENEAMGGY-DPYSNSK---GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNV---------------- 195 (356)
T ss_dssp CCCCSSSCBCTTSCBCCS-SHHHHHH---HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCE----------------
T ss_pred cccccccccccccccCCC-Ccccccc---ccchhhhhHHhhhcccchhccccCceEEeccCCCe----------------
Confidence 544 34466777777775 8999999 6678888777653 4567888887762
Q ss_pred HHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCc
Q psy16545 401 RVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQG 480 (600)
Q Consensus 401 ~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 480 (600)
|||++... . .-+..+++. ..+....+ + +.+
T Consensus 196 --------------yGp~~~~~----------------~-----------~~i~~~~~~---~~~~~~~~----~--~~~ 225 (356)
T d1rkxa_ 196 --------------IGGGDWAL----------------D-----------RIVPDILRA---FEQSQPVI----I--RNP 225 (356)
T ss_dssp --------------ECTTCCCS----------------S-----------CHHHHHHHH---HHTTCCEE----C--SCT
T ss_pred --------------eCCCcchh----------------h-----------HHHHHHHHH---HhCCCceE----E--eec
Confidence 34432110 0 001112221 22333222 1 334
Q ss_pred ccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCC-------CceeEeEcCCCCCccHHHHHHHHhhh
Q psy16545 481 TSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP-------VPYIFYNLGTGQGTSVLQLLRTFERV 553 (600)
Q Consensus 481 ~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~-------~~~~~~nl~~~~~~s~~e~~~~~~~~ 553 (600)
.+. ++|+| +.|++.++..++... ..+..++.+.++.++++++++.+.+.
T Consensus 226 ~~~----~~~~~--------------------v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 281 (356)
T d1rkxa_ 226 HAI----RPWQH--------------------VLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKY 281 (356)
T ss_dssp TCE----ECCEE--------------------THHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHH
T ss_pred ccc----ccccc--------------------cccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHH
Confidence 444 78888 777788777665432 12445555567789999999999999
Q ss_pred cCCcccccc-cCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 554 TGKPVPYIV-EARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 554 ~g~~~~~~~-~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
.+....+.. ...++.+.+.+.+|++|++++|||+|+++|+.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~d~skak~~LGw~P~~~l~eg 324 (356)
T d1rkxa_ 282 WGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWNLNTT 324 (356)
T ss_dssp HCTTCCEEC-------CCCCCCBCCHHHHHHHCCCCCCCHHHH
T ss_pred hCCCccEEEcCCCCCCCcCeeeEcHHHHHHHHCCCcCCCHHHH
Confidence 998766654 344566778889999999999999999998753
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.81 E-value=2.5e-19 Score=176.70 Aligned_cols=241 Identities=19% Similarity=0.129 Sum_probs=181.9
Q ss_pred HhhhCCceeEEEe-----ecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEE
Q psy16545 247 EQFTGKKVDFYSC-----DLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQL 321 (600)
Q Consensus 247 ~~l~~~~v~~i~~-----Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~ 321 (600)
+.+...+.+++.. |+.|...+.++++..++|+|||+|+......+...+......|+..+.++++.++..+ .++
T Consensus 19 ~~L~~~g~~Vi~~~r~~~D~~d~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~ 97 (281)
T d1vl0a_ 19 KQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEI 97 (281)
T ss_dssp HHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEE
T ss_pred HHHHhCCCEEEEeechhccCCCHHHHHHHHHHcCCCEEEeeccccccccccccchhhccccccccccccccccccc-ccc
Confidence 4444555555544 5788889999998888999999999988777888888899999999999999998875 589
Q ss_pred EEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHH
Q psy16545 322 VFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFE 400 (600)
Q Consensus 322 v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~ 400 (600)
+++||..+|+.....+.+|+++..+. +.|+.+| ...|.+++ ..+.+.+++|+++ +|++++..
T Consensus 98 ~~~ss~~v~~~~~~~~~~e~~~~~~~-~~~~~~k---~~~e~~~~----~~~~~~~i~R~~~vyG~~~~~~--------- 160 (281)
T d1vl0a_ 98 VQISTDYVFDGEAKEPITEFDEVNPQ-SAYGKTK---LEGENFVK----ALNPKYYIVRTAWLYGDGNNFV--------- 160 (281)
T ss_dssp EEEEEGGGSCSCCSSCBCTTSCCCCC-SHHHHHH---HHHHHHHH----HHCSSEEEEEECSEESSSSCHH---------
T ss_pred cccccceeeeccccccccccccccch-hhhhhhh---hHHHHHHH----HhCCCccccceeEEeCCCcccc---------
Confidence 99999999999888899999988775 7899988 55666654 4688999999987 55543211
Q ss_pred HHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCc
Q psy16545 401 RVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQG 480 (600)
Q Consensus 401 ~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 480 (600)
..++..+. .+.++.+. +++
T Consensus 161 -----------------------------------------------------~~~~~~~~--~~~~~~~~------~~~ 179 (281)
T d1vl0a_ 161 -----------------------------------------------------KTMINLGK--THDELKVV------HDQ 179 (281)
T ss_dssp -----------------------------------------------------HHHHHHHH--HCSEEEEE------SSC
T ss_pred -----------------------------------------------------cchhhhhc--cCCceeec------CCc
Confidence 11111111 13333331 333
Q ss_pred ccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccc
Q psy16545 481 TSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPY 560 (600)
Q Consensus 481 ~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~ 560 (600)
. ++|+| ++|+++++..+++... .++||+++++.+|+.|+++.+++.+|.+.++
T Consensus 180 ~------~~~i~--------------------v~D~~~~~~~~~~~~~-~g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i 232 (281)
T d1vl0a_ 180 V------GTPTS--------------------TVDLARVVLKVIDEKN-YGTFHCTCKGICSWYDFAVEIFRLTGIDVKV 232 (281)
T ss_dssp E------ECCEE--------------------HHHHHHHHHHHHHHTC-CEEEECCCBSCEEHHHHHHHHHHHHCCCCEE
T ss_pred e------eccch--------------------hhhhhhhhhhhhhhcc-cCceeEeCCCccchHHHHHHHHHHhCCCceE
Confidence 3 88888 8899999999887654 4699999999999999999999999987666
Q ss_pred cccCCCC-----CCccccccChHHHHHHcCceeeEEEEe
Q psy16545 561 IVEARRE-----GDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 561 ~~~~~~~-----~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
...+... .++.+.++|++|+++.|||+|+ +++.
T Consensus 233 ~~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~~~~-~~~~ 270 (281)
T d1vl0a_ 233 TPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKE 270 (281)
T ss_dssp EEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHH
T ss_pred EeccHHHcCCcCCCccccccCHHHHHHHhCCCCC-CHHH
Confidence 5443221 1234456899999999999987 6653
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.80 E-value=5.4e-20 Score=181.50 Aligned_cols=190 Identities=24% Similarity=0.206 Sum_probs=159.9
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccccccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCCChhh
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQEPLM 88 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~ 88 (600)
|||++|++|++|.+ .+...+.+++++||+..|+.|.+++.+ +++..++|+|||+|+......+...+..
T Consensus 6 ItGasGfiG~~l~~--~L~~~g~~Vi~~~r~~~D~~d~~~~~~---------~l~~~~~d~vih~a~~~~~~~~~~~~~~ 74 (281)
T d1vl0a_ 6 ITGANGQLGREIQK--QLKGKNVEVIPTDVQDLDITNVLAVNK---------FFNEKKPNVVINCAAHTAVDKCEEQYDL 74 (281)
T ss_dssp EESTTSHHHHHHHH--HHTTSSEEEEEECTTTCCTTCHHHHHH---------HHHHHCCSEEEECCCCCCHHHHHHCHHH
T ss_pred EECCCCHHHHHHHH--HHHhCCCEEEEeechhccCCCHHHHHH---------HHHHcCCCEEEeeccccccccccccchh
Confidence 89999999999966 455678899999999999999999988 6665689999999999877666677788
Q ss_pred hHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEE
Q psy16545 89 YYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISL 168 (600)
Q Consensus 89 ~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~il 168 (600)
...+|+..+..+.+.+...+. .+++.||..+|+.....+.+|.++. .|.+.|+.+|...|+++++. +.+.+++
T Consensus 75 ~~~~n~~~~~~~~~~~~~~~~-~~~~~ss~~v~~~~~~~~~~e~~~~-~~~~~~~~~k~~~e~~~~~~-----~~~~~i~ 147 (281)
T d1vl0a_ 75 AYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEV-NPQSAYGKTKLEGENFVKAL-----NPKYYIV 147 (281)
T ss_dssp HHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCC-CCCSHHHHHHHHHHHHHHHH-----CSSEEEE
T ss_pred hcccccccccccccccccccc-cccccccceeeeccccccccccccc-cchhhhhhhhhHHHHHHHHh-----CCCcccc
Confidence 899999999999999988775 7889999999998888899999999 89999999999999988664 6788999
Q ss_pred ecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeecccc
Q psy16545 169 RYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVN 232 (600)
Q Consensus 169 R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~ 232 (600)
||+++|||+ .++...+...+. .++++.++++ +.|+++|+.|+++.+..
T Consensus 148 R~~~vyG~~-------------~~~~~~~~~~~~-~~~~~~~~~~--~~~~~i~v~D~~~~~~~ 195 (281)
T d1vl0a_ 148 RTAWLYGDG-------------NNFVKTMINLGK-THDELKVVHD--QVGTPTSTVDLARVVLK 195 (281)
T ss_dssp EECSEESSS-------------SCHHHHHHHHHH-HCSEEEEESS--CEECCEEHHHHHHHHHH
T ss_pred ceeEEeCCC-------------cccccchhhhhc-cCCceeecCC--ceeccchhhhhhhhhhh
Confidence 999999996 235666666665 4467777665 78999999998875443
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.77 E-value=1.3e-18 Score=172.81 Aligned_cols=237 Identities=16% Similarity=0.087 Sum_probs=161.0
Q ss_pred EeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCCCC
Q psy16545 258 SCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLP 337 (600)
Q Consensus 258 ~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~~ 337 (600)
.+|+.|.+.+.++++..++|+|||+||......+..++...+..|+.++.+|+++|++.++ +++++||+.+|+.....|
T Consensus 37 ~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~ 115 (298)
T d1n2sa_ 37 CGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIP 115 (298)
T ss_dssp CCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCC
T ss_pred cCcCCCHHHHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCC
Confidence 4689999999999988889999999999888888899999999999999999999998874 899999999999888889
Q ss_pred CCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecccCCCCcchHHHHHHHHHHHhCCCCcceEEeeCCC
Q psy16545 338 ITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGT 417 (600)
Q Consensus 338 ~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~ 417 (600)
.+|+.+..|. +.|+.+| ..+|..++.+ .....++|+.....+ +|+
T Consensus 116 ~~E~~~~~p~-~~y~~~k---~~~e~~~~~~----~~~~~~~~~~~~~~~---------------------------~~~ 160 (298)
T d1n2sa_ 116 WQETDATSPL-NVYGKTK---LAGEKALQDN----CPKHLIFRTSWVYAG---------------------------KGN 160 (298)
T ss_dssp BCTTSCCCCS-SHHHHHH---HHHHHHHHHH----CSSEEEEEECSEECS---------------------------SSC
T ss_pred CccccccCCC-chHhhhh---hhhhhhHHhh----hcccccccccceeec---------------------------cCC
Confidence 9999998886 8999999 7778777654 334556665442111 111
Q ss_pred CCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhhhcCCC
Q psy16545 418 GQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP 497 (600)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~~ 497 (600)
.. ...+.+.+. ...++.+ .+... ++++|+.|
T Consensus 161 ~~---------------------------------~~~~~~~~~--~~~~~~~------~~~~~------~~~~~~~d-- 191 (298)
T d1n2sa_ 161 NF---------------------------------AKTMLRLAK--ERQTLSV------INDQY------GAPTGAEL-- 191 (298)
T ss_dssp CH---------------------------------HHHHHHHHH--HCSEEEE------ECSCE------ECCEEHHH--
T ss_pred cc---------------------------------chhhhhhhc--ccceeec------cccee------ecccccch--
Confidence 10 001111111 1222221 12222 66777443
Q ss_pred ccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCc---ccc---cccC-----CC
Q psy16545 498 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP---VPY---IVEA-----RR 566 (600)
Q Consensus 498 ~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~---~~~---~~~~-----~~ 566 (600)
.++++..++..+.......++||+++++.++..|+++++.+..+.. ... ...+ ..
T Consensus 192 --------------~~~~~~~~i~~~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~ 257 (298)
T d1n2sa_ 192 --------------LADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTP 257 (298)
T ss_dssp --------------HHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCS
T ss_pred --------------HHHHHHHHHhhhhccccccccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCcc
Confidence 1223333333333444568999999999999999999998876421 111 0111 11
Q ss_pred CCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 567 EGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 567 ~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
...+.+..+|++|+++.|||+|+ +++.
T Consensus 258 a~RP~~~~ld~~K~~~~~~~~~~-~~~~ 284 (298)
T d1n2sa_ 258 ASRPGNSRLNTEKFQRNFDLILP-QWEL 284 (298)
T ss_dssp SCCCSBCCBCCHHHHHHHTCCCC-BHHH
T ss_pred CCCccccccCHHHHHHHHCCCCC-cHHH
Confidence 11234557899999999999997 6653
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.77 E-value=8.2e-19 Score=178.39 Aligned_cols=245 Identities=14% Similarity=0.050 Sum_probs=161.0
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecCcccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTVY 330 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~r~v~~SS~~vY 330 (600)
....++.+|+.+...+.+++. ++|+|+|+|+.... ..++...+..|+.||.++|++|.+. ++++|||+||++++
T Consensus 62 ~~~~~~~~Dl~~~~~~~~~~~--~~~~v~~~a~~~~~---~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~ 136 (342)
T d1y1pa1 62 RFETAVVEDMLKQGAYDEVIK--GAAGVAHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSA 136 (342)
T ss_dssp TEEEEECSCTTSTTTTTTTTT--TCSEEEECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGT
T ss_pred cccEEEeccccchhhhhhhcc--cchhhhhhcccccc---cccccccccchhhhHHHHHHhhhcccccccccccccceee
Confidence 344668899999999988887 88999999997543 3467788899999999999999997 68999999998654
Q ss_pred cCCC----CCCC----------------CCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCC--CeeEeecc-cCCC
Q psy16545 331 GEPQ----FLPI----------------TEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNK--PVPYIFYN-LGTG 387 (600)
Q Consensus 331 g~~~----~~~~----------------~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~--~~~~r~~~-~g~~ 387 (600)
+... .... .|+.+..|. ++|+.+| ..+|.+++.|.+.++.+ .+.+||+. +||.
T Consensus 137 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~-~~Y~~sK---~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~ 212 (342)
T d1y1pa1 137 LIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSL-WVYAASK---TEAELAAWKFMDENKPHFTLNAVLPNYTIGTI 212 (342)
T ss_dssp CCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHH-HHHHHHH---HHHHHHHHHHHHHHCCSSEEEEEEESEEECCC
T ss_pred ccCCCCCCCccccccccccccccccccccccCCCCCc-Ccccchh---HhHHHHHHHhhhhcccccccceecccceeCCC
Confidence 3221 1112 334444443 7899999 88999999999887654 46677665 5542
Q ss_pred CcchHHHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCC
Q psy16545 388 QGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKP 467 (600)
Q Consensus 388 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 467 (600)
.+ |... ...+..++..+ ..++.
T Consensus 213 ~~---------------------------~~~~-----------------------------~~~~~~~~~~l--~~g~~ 234 (342)
T d1y1pa1 213 FD---------------------------PETQ-----------------------------SGSTSGWMMSL--FNGEV 234 (342)
T ss_dssp SC---------------------------TTTC-----------------------------CCHHHHHHHHH--HTTCC
T ss_pred CC---------------------------cccc-----------------------------ccchHHHHHHH--HcCCc
Confidence 11 1100 00011111111 11333
Q ss_pred CceeeccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHH
Q psy16545 468 VPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLL 547 (600)
Q Consensus 468 ~~~~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~ 547 (600)
.+. ..+++. ++|+| +.|+++++..++++....+.||+++++.+|++|++
T Consensus 235 ~~~-----~~~~~~------~~~v~--------------------v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia 283 (342)
T d1y1pa1 235 SPA-----LALMPP------QYYVS--------------------AVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVL 283 (342)
T ss_dssp CHH-----HHTCCS------EEEEE--------------------HHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHH
T ss_pred Ccc-----cCCccc------eeeee--------------------HHHHHHHHHHhhcCccccceEEEEcCCceEHHHHH
Confidence 322 113333 77887 88999998888877656667778889999999999
Q ss_pred HHHhhhcCC-cccccccCCCCCCccccccChHHHHHHcCceeeEEEEe
Q psy16545 548 RTFERVTGK-PVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVKI 594 (600)
Q Consensus 548 ~~~~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~ 594 (600)
+++.+.++. ..+..+..............+.+..+.|||.|.++||.
T Consensus 284 ~~i~k~~p~~~~~~~~~~~~~~~~~~~~~~s~~~~k~lg~~~~~~lee 331 (342)
T d1y1pa1 284 ATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEE 331 (342)
T ss_dssp HHHHHHCTTSCCCCCCCCCCCCCCEECCHHHHHHHHHTTCCSCCCHHH
T ss_pred HHHHHHcCCCcCCccCCccCcccccccchHHHHHHHHcCCCCCcCHHH
Confidence 999999853 33222221111111111222345555699999999874
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=7.3e-19 Score=175.24 Aligned_cols=226 Identities=15% Similarity=0.107 Sum_probs=147.7
Q ss_pred CccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccc
Q psy16545 275 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLG 354 (600)
Q Consensus 275 ~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~s 354 (600)
.+++|+|+|+..... ..+.......|+.++.+++++++..++ ++|+.||..+|+........|+.+..| .+.|+.+
T Consensus 68 ~~~~i~~~aa~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~i-~~v~~ss~~~~~~~~~~~~~~~~~~~~-~~~Y~~~ 143 (307)
T d1eq2a_ 68 DVEAIFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKP-LNVYGYS 143 (307)
T ss_dssp SCCEEEECCSCCCTT--CCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCC-SSHHHHH
T ss_pred chhhhhhhccccccc--ccccccccccccccccccccccccccc-ccccccccccccccccccccccccccc-ccccccc
Confidence 579999999875433 346667788899999999999999987 577777777776665555566665555 4899999
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHH
Q psy16545 355 TGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERV 433 (600)
Q Consensus 355 K~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 433 (600)
| ..+|.+++.+.+.++++++++|+++ +||+......
T Consensus 144 K---~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~---------------------------------------- 180 (307)
T d1eq2a_ 144 K---FLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS---------------------------------------- 180 (307)
T ss_dssp H---HHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGG----------------------------------------
T ss_pred c---chhhhhccccccccccccccccceeEeecccccccc----------------------------------------
Confidence 9 8899999999999999999999987 6554432100
Q ss_pred hCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhH
Q psy16545 434 TGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSV 513 (600)
Q Consensus 434 ~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v 513 (600)
....+..+...+. .++...+. .|++.+. |+|+| +
T Consensus 181 ---------------~~~~~~~~~~~~~--~~~~~~~~-----~g~~~~~----r~~~~--------------------v 214 (307)
T d1eq2a_ 181 ---------------MASVAFHLNTQLN--NGESPKLF-----EGSENFK----RDFVY--------------------V 214 (307)
T ss_dssp ---------------GSCHHHHHHHHHH--C------------------C----BCEEE--------------------H
T ss_pred ---------------ccccccccccccc--cccceeee-----cCcccee----eeeee--------------------c
Confidence 0000111111111 12222221 2444444 88988 8
Q ss_pred HHHHHHhhhhcCCCCceeEeEcCCCCCccHHHHHHHHhhhcCCcccccccCC----CCCCccccccChHHHHHHcCceee
Q psy16545 514 LQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIVEAR----REGDIVSMYANTDLAQRELGWSAR 589 (600)
Q Consensus 514 ~d~~~a~~~~~~~~~~~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~d~~k~~~~lG~~p~ 589 (600)
+|++.++..++.+. ..+.||+++++..|++|+++++.+..+. ..+.+.+. +........+|++|+++.+||+|+
T Consensus 215 ~d~~~~~~~~~~~~-~~~~~~~~~~~~~si~~i~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~~~~~p~ 292 (307)
T d1eq2a_ 215 GDVADVNLWFLENG-VSGIFNLGTGRAESFQAVADATLAYHKK-GQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPF 292 (307)
T ss_dssp HHHHHHHHHHHHHC-CCEEEEESCSCCBCHHHHHHHC----------------------CCCSCCBCCHHHHHTTCCCCC
T ss_pred ccHHHHHHHHhhhc-cccccccccccchhHHHHHHHHHHhcCC-CCeeEeeCCccCCCCCceeeecCHHHHHHHHCCCCC
Confidence 88999998877654 4579999999999999999999887763 23333222 222344566799999999999999
Q ss_pred EEEEec
Q psy16545 590 CTVKIS 595 (600)
Q Consensus 590 ~~l~~~ 595 (600)
++|+.+
T Consensus 293 ~sl~eg 298 (307)
T d1eq2a_ 293 KTVAEG 298 (307)
T ss_dssp CCHHHH
T ss_pred CCHHHH
Confidence 998754
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.75 E-value=1.2e-18 Score=178.01 Aligned_cols=203 Identities=17% Similarity=0.135 Sum_probs=155.2
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTHDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 67 (600)
.|||++|++|.++.+.. ...+.+++++||. .+|++|++.+.+ ++....+
T Consensus 12 LVTG~tGfIGs~lv~~L--l~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~---------~~~~~~~ 80 (356)
T d1rkxa_ 12 FVTGHTGFKGGWLSLWL--QTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLE---------SIREFQP 80 (356)
T ss_dssp EEETTTSHHHHHHHHHH--HHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHH---------HHHHHCC
T ss_pred EEECCCCHHHHHHHHHH--HHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhh---------hhhhchh
Confidence 48999999999995533 2223333333332 679999998888 5555679
Q ss_pred CEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCC-CeEEEecCccccCCC-CCCCCCCCCCCCCCCChHHHH
Q psy16545 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGV-YQLVFSSSCTVYGEP-QFLPITEDHPTGNIKNVYGKT 145 (600)
Q Consensus 68 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-~r~I~~SS~~vyg~~-~~~~~~E~~~~~~p~s~Y~~s 145 (600)
|+|+|+|+......+..++...+.+|+.|+.+++++|++.+. +.+++.||...+... ...+.+|+.+. .|.++|+.+
T Consensus 81 ~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~-~p~~~y~~~ 159 (356)
T d1rkxa_ 81 EIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAM-GGYDPYSNS 159 (356)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCB-CCSSHHHHH
T ss_pred hhhhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccccccccccccccccccccccc-CCCCccccc
Confidence 999999999876666778889999999999999999999754 455666665555433 34567888888 899999999
Q ss_pred HHHHHHHHHHHHhhc--------CCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCccc
Q psy16545 146 KHFIEEMLKDLSKAH--------KEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYET 217 (600)
Q Consensus 146 K~~~e~~~~~~~~~~--------~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~ 217 (600)
|...|..+..+..++ .++.++++||+++|||+..+ ...+++.+.+.+.+. ...+++++.+.
T Consensus 160 k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~---------~~~~i~~~~~~~~~~--~~~~~~~~~~~ 228 (356)
T d1rkxa_ 160 KGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA---------LDRIVPDILRAFEQS--QPVIIRNPHAI 228 (356)
T ss_dssp HHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC---------SSCHHHHHHHHHHTT--CCEECSCTTCE
T ss_pred cccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcch---------hhHHHHHHHHHHhCC--CceEEeecccc
Confidence 999999998776543 26789999999999996431 245788888877643 33468999999
Q ss_pred ccCcceEEeeeccccc
Q psy16545 218 EDGTGKVVAIDNFVNS 233 (600)
Q Consensus 218 ~~~~~v~d~v~~~~~a 233 (600)
|+++|+.|++.++..+
T Consensus 229 ~~~~~v~D~~~a~~~~ 244 (356)
T d1rkxa_ 229 RPWQHVLEPLSGYLLL 244 (356)
T ss_dssp ECCEETHHHHHHHHHH
T ss_pred ccccccccccchhhhh
Confidence 9999999998876654
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.74 E-value=1.7e-18 Score=175.92 Aligned_cols=200 Identities=15% Similarity=0.035 Sum_probs=141.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
.|||++|++|.++.+ .|...+.+++++.|+ .+|+.+.+++.+ ++.
T Consensus 15 lVTG~sGfIGs~l~~--~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---------~~~- 82 (342)
T d1y1pa1 15 LVTGANGFVASHVVE--QLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDE---------VIK- 82 (342)
T ss_dssp EEETTTSHHHHHHHH--HHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTT---------TTT-
T ss_pred EEECCCCHHHHHHHH--HHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhh---------hcc-
Confidence 489999999999955 333334555444332 368888877777 666
Q ss_pred CCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc-CCCeEEEecCccccCCCCC----CC-----------
Q psy16545 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-GVYQLVFSSSCTVYGEPQF----LP----------- 128 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~r~I~~SS~~vyg~~~~----~~----------- 128 (600)
++|+|+|+|+.... ..++...+++|+.||.+++++|.+. +++++|++||+.+++.... ..
T Consensus 83 -~~~~v~~~a~~~~~---~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~ 158 (342)
T d1y1pa1 83 -GAAGVAHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESI 158 (342)
T ss_dssp -TCSEEEECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHH
T ss_pred -cchhhhhhcccccc---cccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccc
Confidence 89999999998753 3456778899999999999999986 6899999999865432211 11
Q ss_pred -----CCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc-CCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhc
Q psy16545 129 -----ITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAI 202 (600)
Q Consensus 129 -----~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (600)
..|..+. .|.++|+.||..+|++++.+.+++ .+++++++||+.+|||...+.. . ...+..++.+...
T Consensus 159 ~~~~~~~e~~~~-~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~----~--~~~~~~~~~~l~~ 231 (342)
T d1y1pa1 159 DKAKTLPESDPQ-KSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPET----Q--SGSTSGWMMSLFN 231 (342)
T ss_dssp HHHHHSCTTSTT-HHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTT----C--CCHHHHHHHHHHT
T ss_pred cccccccccCCC-CCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccc----c--ccchHHHHHHHHc
Confidence 2345566 677889999999999999988765 3688999999999999643211 1 1223334444443
Q ss_pred CCCCeEEEecCCcccccCcceEEeeeccccc
Q psy16545 203 GSKPHFTVFGADYETEDGTGKVVAIDNFVNS 233 (600)
Q Consensus 203 ~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~a 233 (600)
+ +... ...+.+.|+|+|++|+++.+..+
T Consensus 232 g--~~~~-~~~~~~~~~~v~v~Dva~~~i~~ 259 (342)
T d1y1pa1 232 G--EVSP-ALALMPPQYYVSAVDIGLLHLGC 259 (342)
T ss_dssp T--CCCH-HHHTCCSEEEEEHHHHHHHHHHH
T ss_pred C--CcCc-ccCCccceeeeeHHHHHHHHHHh
Confidence 3 3322 34567789999999988766544
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.72 E-value=4e-17 Score=166.00 Aligned_cols=275 Identities=32% Similarity=0.523 Sum_probs=197.3
Q ss_pred cHHHHHhhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEE
Q psy16545 242 SIRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQL 321 (600)
Q Consensus 242 ~l~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~ 321 (600)
+......+...+++++.+|+.|.+.+.+++...++|+|||+||.........++..+..+|+.++.+++++|++.+++||
T Consensus 41 ~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~ 120 (347)
T d1z45a2 41 SVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKF 120 (347)
T ss_dssp HHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcccceE
Confidence 34455666678899999999999999999988899999999999877778889999999999999999999999999999
Q ss_pred EEecCcccccCCC----CCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH--hCCCCeeEeecc-cCCCCcchHHH
Q psy16545 322 VFSSSCTVYGEPQ----FLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV--TGNKPVPYIFYN-LGTGQGTSVLQ 394 (600)
Q Consensus 322 v~~SS~~vYg~~~----~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~--~~~~~~~~r~~~-~g~~~~~~~~~ 394 (600)
|++||.+|||... ..+++|+.+..|. ++|+.|| ..+|.+++.+.+. .+++++++|+++ +|++....
T Consensus 121 i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~-~~Y~~sK---~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~--- 193 (347)
T d1z45a2 121 VFSSSATVYGDATRFPNMIPIPEECPLGPT-NPYGHTK---YAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGL--- 193 (347)
T ss_dssp EEEEEGGGGCCGGGSTTCCSBCTTSCCCCC-SHHHHHH---HHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSS---
T ss_pred EeecceeeecCcccCCCCCccccccCCCCC-ChhHhHH---HHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCc---
Confidence 9999999999653 3568888888876 8999999 8899999999764 578899999987 55433221
Q ss_pred HHHHHHHHhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHH-HHHHhCCCCceeec
Q psy16545 395 LLRTFERVTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRT-FERVTGKPVPYIFY 473 (600)
Q Consensus 395 ~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 473 (600)
+|++.... + ..++.. +....++..++.+
T Consensus 194 --------------------~g~~~~~~----------------~--------------~~~~~~~~~~~~~~~~~i~i- 222 (347)
T d1z45a2 194 --------------------IGEDPLGI----------------P--------------NNLLPYMAQVAVGRREKLYI- 222 (347)
T ss_dssp --------------------CCCCCSSS----------------C--------------CSHHHHHHHHHTTSSSCCCC-
T ss_pred --------------------cCCCcccc----------------H--------------HHHHHHHHHHHhcCCCCeEE-
Confidence 22221110 0 001111 1223343333322
Q ss_pred cCCCCCcccchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcC-------CCCceeEeEcCCCCCccHHHH
Q psy16545 474 NLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTG-------KPVPYIFYNLGTGQGTSVLQL 546 (600)
Q Consensus 474 ~~~~g~~~~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~-------~~~~~~~~nl~~~~~~s~~e~ 546 (600)
.|++.+. ++|+|+.|. +++.|.+.++..++. ....+++||+++++++|++|+
T Consensus 223 ---~g~~~~~----~~~~~~~d~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~ 281 (347)
T d1z45a2 223 ---FGDDYDS----RDGTPIRDY--------------IHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEV 281 (347)
T ss_dssp ---C----------CCSSCEECE--------------EEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHH
T ss_pred ---eCCCccc----cCCceeeee--------------eeeecccccccccccccccccccccccccceecCCCcccHHHH
Confidence 2344433 555555531 125555554444331 223589999999999999999
Q ss_pred HHHHhhhcCCcccccccCCCCCCccccccChHHHHHHcCceeeEEEEec
Q psy16545 547 LRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVKIS 595 (600)
Q Consensus 547 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~ 595 (600)
++++.+++|.+.++...+.+++++....+|++|++++|||+|+++||.+
T Consensus 282 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~sk~~~~lGw~p~~~lee~ 330 (347)
T d1z45a2 282 YHAFCKASGIDLPYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDS 330 (347)
T ss_dssp HHHHHHHHTCCCCC---------CCCCCBCCHHHHHHTCCCCCCCHHHH
T ss_pred HHHHHHHHCCCCceEeCCCCCCCCCEeeECHHHHHHHHCCCCCCCHHHH
Confidence 9999999999988888888888888899999999999999999998754
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.71 E-value=1.1e-17 Score=165.97 Aligned_cols=190 Identities=21% Similarity=0.171 Sum_probs=145.0
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccccc----ccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcccCCC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARRE----GDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVGESMQ 84 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~----~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~ 84 (600)
|||++|++|+++.+ .+...+ +.++++++. +|++|.+.+.+ +++..++|+||||||......+..
T Consensus 5 ItG~tGfiG~~l~~--~L~~~g-~~v~~~~~~~~~~~Dl~~~~~~~~---------~i~~~~~D~Vih~Aa~~~~~~~~~ 72 (298)
T d1n2sa_ 5 LFGKTGQVGWELQR--SLAPVG-NLIALDVHSKEFCGDFSNPKGVAE---------TVRKLRPDVIVNAAAHTAVDKAES 72 (298)
T ss_dssp EECTTSHHHHHHHH--HTTTTS-EEEEECTTCSSSCCCTTCHHHHHH---------HHHHHCCSEEEECCCCCCHHHHTT
T ss_pred EECCCCHHHHHHHH--HHHhCC-CEEEEECCCccccCcCCCHHHHHH---------HHHHcCCCEEEEeccccccccccc
Confidence 79999999999965 333333 345455553 79999998888 666567999999999987777788
Q ss_pred ChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCce
Q psy16545 85 EPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWN 164 (600)
Q Consensus 85 ~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~ 164 (600)
++...+++|+.++.+|+++|++.++ +++++||+.+|+.....|.+|+.+. .|.+.|+.+|..+|..++.... .
T Consensus 73 ~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~-~p~~~y~~~k~~~e~~~~~~~~-----~ 145 (298)
T d1n2sa_ 73 EPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDAT-SPLNVYGKTKLAGEKALQDNCP-----K 145 (298)
T ss_dssp CHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCC-CCSSHHHHHHHHHHHHHHHHCS-----S
T ss_pred Cccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCcccccc-CCCchHhhhhhhhhhhHHhhhc-----c
Confidence 8999999999999999999999886 7999999999988888899999999 8999999999999998877543 3
Q ss_pred EEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeecccc
Q psy16545 165 IISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVN 232 (600)
Q Consensus 165 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~ 232 (600)
..++|++..|+.. + .+....+.+.+. ...++.+. +.+.++++++.|+++++..
T Consensus 146 ~~~~~~~~~~~~~-----~-------~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~d~~~~~~~ 198 (298)
T d1n2sa_ 146 HLIFRTSWVYAGK-----G-------NNFAKTMLRLAK-ERQTLSVI--NDQYGAPTGAELLADCTAH 198 (298)
T ss_dssp EEEEEECSEECSS-----S-------CCHHHHHHHHHH-HCSEEEEE--CSCEECCEEHHHHHHHHHH
T ss_pred cccccccceeecc-----C-------Cccchhhhhhhc-ccceeecc--cceeecccccchHHHHHHH
Confidence 3556665555432 1 223445555555 33555554 4467788888887765543
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.71 E-value=2.3e-17 Score=164.11 Aligned_cols=206 Identities=17% Similarity=0.134 Sum_probs=138.0
Q ss_pred CCCCcchHHHHHHHhhhccCCCc-cEEecccc-------------cccccChHHhhhHHhhhhcccccccCCCCEEEEcC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPV-PYIVEARR-------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFA 74 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~-~~~~~~~~-------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A 74 (600)
|||++||+|+++.+ +|...+. .++++|.- ..|..+.+........ ......+++|+|+|
T Consensus 4 ITGgsGfIGs~lv~--~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~a 76 (307)
T d1eq2a_ 4 VTGGAGFIGSNIVK--ALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMA-----GEEFGDVEAIFHEG 76 (307)
T ss_dssp EETTTSHHHHHHHH--HHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHT-----TCCCSSCCEEEECC
T ss_pred EecCccHHHHHHHH--HHHhCCCCeEEEEECCCCcchhhcccccchhhhccchHHHHHHhh-----hhcccchhhhhhhc
Confidence 79999999999955 4444443 45544311 1222222222220000 11113689999999
Q ss_pred cccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q psy16545 75 AVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLK 154 (600)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~ 154 (600)
+..... .........+|+.++.++++++++.++ ++++.||+.+|+.....+..|+.+. .|.+.|+.+|..+|.+++
T Consensus 77 a~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~i-~~v~~ss~~~~~~~~~~~~~~~~~~-~~~~~Y~~~K~~~e~~~~ 152 (307)
T d1eq2a_ 77 ACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYE-KPLNVYGYSKFLFDEYVR 152 (307)
T ss_dssp SCCCTT--CCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGC-CCSSHHHHHHHHHHHHHH
T ss_pred cccccc--ccccccccccccccccccccccccccc-ccccccccccccccccccccccccc-ccccccccccchhhhhcc
Confidence 876433 346667889999999999999999998 5777777777776666667777777 889999999999999999
Q ss_pred HHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeecccc
Q psy16545 155 DLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFVN 232 (600)
Q Consensus 155 ~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~~ 232 (600)
.+.+++ +++++++||+++|||.... .+....+++.+.+.+........+.|++.+.|+++|+.|+++.+..
T Consensus 153 ~~~~~~-~~~~~~~r~~~vyGp~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~ 223 (307)
T d1eq2a_ 153 QILPEA-NSQIVGFRYFNVYGPREGH------KGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLW 223 (307)
T ss_dssp HHGGGC-SSCEEEEEECEEESSSCGG------GGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHH
T ss_pred cccccc-ccccccccceeEeeccccc------cccccccccccccccccccceeeecCccceeeeeeecccHHHHHHH
Confidence 999887 9999999999999996431 1223456676776666443444457999999999999998876553
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=6e-16 Score=147.83 Aligned_cols=177 Identities=14% Similarity=0.060 Sum_probs=122.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccCCCCEEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIH 72 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih 72 (600)
.|||+||++|+++.+..-..+.-.++++++|+ .+|+.+.+++.+ ++. ++|+|||
T Consensus 18 lItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~---------~~~--~~d~vi~ 86 (232)
T d2bkaa1 18 FILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYAS---------AFQ--GHDVGFC 86 (232)
T ss_dssp EEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGG---------GGS--SCSEEEE
T ss_pred EEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccccccccc---------ccc--ccccccc
Confidence 48999999999995532212211244445554 245555555555 565 7999999
Q ss_pred cCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q psy16545 73 FAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEM 152 (600)
Q Consensus 73 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~ 152 (600)
+||.... ..+.....++|+.++.+++++|++.++++||++||..+++ .+.++|+++|..+|+.
T Consensus 87 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~--------------~~~~~Y~~~K~~~E~~ 149 (232)
T d2bkaa1 87 CLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK--------------SSNFLYLQVKGEVEAK 149 (232)
T ss_dssp CCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--------------TCSSHHHHHHHHHHHH
T ss_pred ccccccc---ccchhhhhhhcccccceeeecccccCccccccCCcccccc--------------CccchhHHHHHHhhhc
Confidence 9987532 2345567899999999999999999999999999987764 3457899999999998
Q ss_pred HHHHHhhcCCc-eEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeeccc
Q psy16545 153 LKDLSKAHKEW-NIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDNFV 231 (600)
Q Consensus 153 ~~~~~~~~~~~-~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~~~ 231 (600)
+.++ ++ +++|+||+.+||++.. .++...+.+..... ...+......++++|++++++
T Consensus 150 l~~~-----~~~~~~IlRP~~i~G~~~~-----------~~~~~~~~~~~~~~------~~~~~~~~~~I~~~dvA~a~i 207 (232)
T d2bkaa1 150 VEEL-----KFDRYSVFRPGVLLCDRQE-----------SRPGEWLVRKFFGS------LPDSWASGHSVPVVTVVRAML 207 (232)
T ss_dssp HHTT-----CCSEEEEEECCEEECTTGG-----------GSHHHHHHHHHHCS------CCTTGGGGTEEEHHHHHHHHH
T ss_pred cccc-----cccceEEecCceeecCCCc-----------CcHHHHHHHHHhhc------cCCcccCCCeEEHHHHHHHHH
Confidence 7653 44 4899999999999632 22333344433321 223334445678888888766
Q ss_pred ccc
Q psy16545 232 NSV 234 (600)
Q Consensus 232 ~a~ 234 (600)
.++
T Consensus 208 ~~~ 210 (232)
T d2bkaa1 208 NNV 210 (232)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=9.9e-14 Score=129.43 Aligned_cols=166 Identities=13% Similarity=0.046 Sum_probs=120.8
Q ss_pred cCCCCcchHHHHHHHhhhcc------------------CCCccEEecccccccccChHHhhhHHhhhhcccccccCCCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVT------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHDIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~ 69 (600)
.|||++|++|+++.+..... ..+++++ .+|+.|.+++.+ ++. ++|+
T Consensus 7 lV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~-----~gD~~d~~~l~~---------al~--~~d~ 70 (205)
T d1hdoa_ 7 AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVV-----VGDVLQAADVDK---------TVA--GQDA 70 (205)
T ss_dssp EEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEE-----ESCTTSHHHHHH---------HHT--TCSE
T ss_pred EEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccc-----cccccchhhHHH---------Hhc--CCCE
Confidence 38999999999985422111 1234555 789999999888 776 8999
Q ss_pred EEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q psy16545 70 VIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFI 149 (600)
Q Consensus 70 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~ 149 (600)
|||++|..... . ....+..++.++++++++++++|||++||..+++.... .. .....|...|..+
T Consensus 71 vi~~~g~~~~~----~---~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~-------~~-~~~~~~~~~~~~~ 135 (205)
T d1hdoa_ 71 VIVLLGTRNDL----S---PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK-------VP-PRLQAVTDDHIRM 135 (205)
T ss_dssp EEECCCCTTCC----S---CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTC-------SC-GGGHHHHHHHHHH
T ss_pred EEEEeccCCch----h---hhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcc-------cc-ccccccchHHHHH
Confidence 99999875321 1 23467789999999999999999999999988764321 11 2345788999999
Q ss_pred HHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEEeeec
Q psy16545 150 EEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVVAIDN 229 (600)
Q Consensus 150 e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d~v~~ 229 (600)
|++++. .+++++++||+.+++.... + ...+..+|.....+++++|+++.
T Consensus 136 e~~l~~-----~~~~~tiirp~~~~~~~~~-----------------------~---~~~~~~~~~~~~~~i~~~DvA~~ 184 (205)
T d1hdoa_ 136 HKVLRE-----SGLKYVAVMPPHIGDQPLT-----------------------G---AYTVTLDGRGPSRVISKHDLGHF 184 (205)
T ss_dssp HHHHHH-----TCSEEEEECCSEEECCCCC-----------------------S---CCEEESSSCSSCSEEEHHHHHHH
T ss_pred HHHHHh-----cCCceEEEecceecCCCCc-----------------------c---cEEEeeCCCCCCCcCCHHHHHHH
Confidence 987764 2899999999999865311 1 12234566667778888998887
Q ss_pred cccccc
Q psy16545 230 FVNSVH 235 (600)
Q Consensus 230 ~~~a~~ 235 (600)
+..++.
T Consensus 185 ~~~~l~ 190 (205)
T d1hdoa_ 185 MLRCLT 190 (205)
T ss_dssp HHHTTS
T ss_pred HHHHhC
Confidence 776654
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.42 E-value=5.1e-13 Score=125.12 Aligned_cols=139 Identities=12% Similarity=0.041 Sum_probs=101.5
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccccc--------ccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCcc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARRE--------GDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAVG 80 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~--------~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~ 80 (600)
|||++|++|+++.+.....+.-.+++++.|+. .+..|..++.. .+. ..+|+||||+|....
T Consensus 7 ItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~~~~~~~~d~~~~~~---------~~~-~~~d~vi~~~g~~~~- 75 (212)
T d2a35a1 7 LAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLP---------QLD-GSIDTAFCCLGTTIK- 75 (212)
T ss_dssp EECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGG---------GCC-SCCSEEEECCCCCHH-
T ss_pred EECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcccccccccchhhhhh---------ccc-cchheeeeeeeeecc-
Confidence 79999999999966332223223555555553 23333333333 222 368999999987632
Q ss_pred cCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc
Q psy16545 81 ESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH 160 (600)
Q Consensus 81 ~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~ 160 (600)
.......+.+.|+.++.+++++|++.+++++|++||.++++ .+.+.|+.+|..+|+.+++.
T Consensus 76 -~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~--------------~~~~~y~~~K~~~E~~l~~~---- 136 (212)
T d2a35a1 76 -EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA--------------KSSIFYNRVKGELEQALQEQ---- 136 (212)
T ss_dssp -HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--------------TCSSHHHHHHHHHHHHHTTS----
T ss_pred -ccccccccccchhhhhhhccccccccccccccccccccccc--------------ccccchhHHHHHHhhhcccc----
Confidence 22445678999999999999999999999999999987765 35589999999999987542
Q ss_pred CCc-eEEEEecccccCCCC
Q psy16545 161 KEW-NIISLRYFNPVGAHP 178 (600)
Q Consensus 161 ~~~-~~~ilR~~~v~G~~~ 178 (600)
++ +++++||+.|||+..
T Consensus 137 -~~~~~~I~Rp~~v~G~~~ 154 (212)
T d2a35a1 137 -GWPQLTIARPSLLFGPRE 154 (212)
T ss_dssp -CCSEEEEEECCSEESTTS
T ss_pred -ccccceeeCCcceeCCcc
Confidence 44 589999999999964
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.30 E-value=2.8e-12 Score=121.89 Aligned_cols=150 Identities=12% Similarity=0.050 Sum_probs=112.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------cccccChHHhhhHHhhhhcccccccC-CCCEEEEcCcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------EGDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAAV 76 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~ 76 (600)
-|||+++.+|+.+++ ++...+..++..+|+ .+|++|++++++++++ +.+.. ++|++|||||.
T Consensus 11 lITGas~GIG~aia~--~la~~Ga~V~~~~r~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g~iDiLVnnAG~ 83 (237)
T d1uzma1 11 LVTGGNRGIGLAIAQ--RLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTA-----VEEHQGPVEVLVSNAGL 83 (237)
T ss_dssp EETTTTSHHHHHHHH--HHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHH-----HHHHHSSCSEEEEECSC
T ss_pred EEeCCCCHHHHHHHH--HHHHCCCEEEEEECCcchhcCceEEEEecCCHHHHHHHHHH-----HHHhcCCceEEEeeecc
Confidence 389999999999966 334444555555554 6899999999887666 55443 59999999998
Q ss_pred cCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q psy16545 77 KAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHF 148 (600)
Q Consensus 77 ~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~ 148 (600)
..... ..+++...+++|+.++..+.+++ ++.+-.++|++||..... +. ....+|+.||.+
T Consensus 84 ~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~-~~~~~Y~asKaa 151 (237)
T d1uzma1 84 SADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW-----------GI-GNQANYAASKAG 151 (237)
T ss_dssp CC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------CCHHHHHHHHH
T ss_pred cccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhcc-----------CC-cccHHHHHHHHH
Confidence 64322 33567789999999999998765 445667999999975432 11 456789999999
Q ss_pred HHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 149 IEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 149 ~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+.+++.++.++ .|+++..+.||.+..+
T Consensus 152 l~~lt~~lA~e~~~~gIrVN~I~PG~v~T~ 181 (237)
T d1uzma1 152 VIGMARSIARELSKANVTANVVAPGYIDTD 181 (237)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHhhhhcCCceeeeeeeCcCCCh
Confidence 999999999876 3899999999999766
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.28 E-value=6.3e-12 Score=119.83 Aligned_cols=150 Identities=11% Similarity=0.032 Sum_probs=113.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHHhhhHHhhhhcccccccC-CCCEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYANTDLAQKELGWSARCTH-DIDCV 70 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~V 70 (600)
-|||+++.+|+.+++ ++...+.+++..||+ .+|++|++++++++++ +.++. ++|++
T Consensus 9 lITGas~GIG~aia~--~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g~iDil 81 (242)
T d1ulsa_ 9 LITGAAHGIGRATLE--LFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAE-----ALAHLGRLDGV 81 (242)
T ss_dssp EEESTTSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHH-----HHHHHSSCCEE
T ss_pred EEeCCCCHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHH-----HHHhcCCceEE
Confidence 489999999999955 333344455555554 5899999999987666 54443 59999
Q ss_pred EEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChH
Q psy16545 71 IHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVY 142 (600)
Q Consensus 71 ih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y 142 (600)
|||||...... ..+++...+++|+.++.++.+++.+ .+-..++++||.+..+. +...+|
T Consensus 82 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~-------------~~~~~Y 148 (242)
T d1ulsa_ 82 VHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN-------------LGQANY 148 (242)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC-------------TTCHHH
T ss_pred EECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCC-------------CCCcch
Confidence 99999864422 2356778999999999999988754 34456777777654432 456889
Q ss_pred HHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 143 GKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 143 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+.||.+.+.+++.++.++ .|++++.+.||.+-.+.
T Consensus 149 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~ 185 (242)
T d1ulsa_ 149 AASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRM 185 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChh
Confidence 999999999999998886 37999999999998764
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.27 E-value=6e-12 Score=119.96 Aligned_cols=151 Identities=13% Similarity=0.032 Sum_probs=114.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d 68 (600)
-|||+++.+|+.+++ ++...+.+++..||+ .+|++|++++++++++ +.++. ++|
T Consensus 10 lITGas~GIG~aia~--~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g~id 82 (244)
T d1nffa_ 10 LVSGGARGMGASHVR--AMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDT-----AVTAFGGLH 82 (244)
T ss_dssp EEETTTSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHH-----HHHHHSCCC
T ss_pred EEeCCCCHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHH-----HHHHhCCCe
Confidence 379999999999855 333344444444543 5899999999887766 54433 699
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
++|||||...... ..+++...+++|+.++..+++++ ++.+-.++|++||...+.. . ....
T Consensus 83 ilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-----------~-~~~~ 150 (244)
T d1nffa_ 83 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG-----------T-VACH 150 (244)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------C-TTBH
T ss_pred EEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccc-----------c-cccc
Confidence 9999999875422 23457779999999999999876 3344568999999765421 2 3467
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.|+.||.+.+.+++.++.++ .|+++..+.||.+-.|.
T Consensus 151 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~ 189 (244)
T d1nffa_ 151 GYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM 189 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGG
T ss_pred chhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChh
Confidence 89999999999999999886 38999999999998764
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.27 E-value=5.7e-12 Score=120.24 Aligned_cols=150 Identities=12% Similarity=0.040 Sum_probs=114.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d 68 (600)
-|||+++.+|+.+++. +...+.+++..+|+ .+|+++++++++++++ +.+.. ++|
T Consensus 8 lITGas~GIG~a~a~~--l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g~iD 80 (243)
T d1q7ba_ 8 LVTGASRGIGRAIAET--LAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEK-----IRAEFGEVD 80 (243)
T ss_dssp EESSCSSHHHHHHHHH--HHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHH-----HHHHTCSCS
T ss_pred EEeCCCCHHHHHHHHH--HHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhh-----hhcccCCcc
Confidence 3799999999998553 33334444444444 5899999999887776 55544 599
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
++||+||...... ..+++...+++|+.++..+++++ ++++-.++|++||....-. . +..+
T Consensus 81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~-----------~-~~~~ 148 (243)
T d1q7ba_ 81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMG-----------N-GGQA 148 (243)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------C-TTCH
T ss_pred eehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCC-----------C-CCCH
Confidence 9999999875432 23567779999999999999887 3445578999999765421 1 3567
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+|+.||.+.+.+++.++.++ .|+++..+.||.+-.+
T Consensus 149 ~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~ 186 (243)
T d1q7ba_ 149 NYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETD 186 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEech
Confidence 89999999999999999876 3899999999988765
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.27 E-value=5.2e-12 Score=120.84 Aligned_cols=149 Identities=14% Similarity=0.087 Sum_probs=115.0
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccC-CCCEEEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTH-DIDCVIH 72 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih 72 (600)
|||+++.+|+.+++ ++...+..++..||+ ++|++|.+++++++++ +.+.. ++|++||
T Consensus 10 ITGas~GIG~aia~--~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~G~iDiLVn 82 (248)
T d2d1ya1 10 VTGGARGIGRAIAQ--AFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEE-----AAYALGRVDVLVN 82 (248)
T ss_dssp EETTTSHHHHHHHH--HHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHH-----HHHHHSCCCEEEE
T ss_pred EeCCCCHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-----HHHhcCCCCeEEE
Confidence 79999999999965 444445555556655 5899999998887665 54443 6999999
Q ss_pred cCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHH
Q psy16545 73 FAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGK 144 (600)
Q Consensus 73 ~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~ 144 (600)
|||...... ..+++...+++|+.++.++.+++. +++-.++|++||...+- +. +...+|+.
T Consensus 83 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~-----------~~-~~~~~Y~a 150 (248)
T d2d1ya1 83 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF-----------AE-QENAAYNA 150 (248)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS-----------BC-TTBHHHHH
T ss_pred eCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccc-----------cc-cccchhHH
Confidence 999875432 234567799999999999998874 34556999999986542 12 45678999
Q ss_pred HHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 145 TKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 145 sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
||.+.+.+++.++.++ .|+++..+.||.+-.|
T Consensus 151 sKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~ 184 (248)
T d2d1ya1 151 SKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE 184 (248)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCc
Confidence 9999999999999886 3899999999988765
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.26 E-value=7.5e-12 Score=119.76 Aligned_cols=151 Identities=11% Similarity=0.048 Sum_probs=110.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-------------------cccccChHHhhhHHhhhhcccccccC-CC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-------------------EGDIVSMYANTDLAQKELGWSARCTH-DI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~ 67 (600)
-|||+++-+|+.+++ .+...++.++..||+ .+|++|++++++++++ +.+.. ++
T Consensus 9 lVTGas~GIG~aia~--~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~-----~~~~~G~i 81 (247)
T d2ew8a1 9 VITGGANGIGRAIAE--RFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQ-----VISTFGRC 81 (247)
T ss_dssp EEETTTSHHHHHHHH--HHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHHSCC
T ss_pred EEeCCCCHHHHHHHH--HHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHH-----HHHHcCCC
Confidence 378999999999854 223333344434443 6899999999887665 55443 69
Q ss_pred CEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 68 DCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 68 d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
|++|||||...... ..+++...+++|+.++.++.+++ ++++-.++|++||..... +. +..
T Consensus 82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~-----------~~-~~~ 149 (247)
T d2ew8a1 82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL-----------KI-EAY 149 (247)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS-----------CC-SSC
T ss_pred CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcc-----------cC-ccc
Confidence 99999999864322 33567789999999999999886 444557999999976432 12 345
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
..|+.||.+.+.+++.++.++ .|+++..+.||.+-.+.
T Consensus 150 ~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~ 189 (247)
T d2ew8a1 150 THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTAT 189 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----
T ss_pred ccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence 789999999999999999876 38999999999997764
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.26 E-value=5.4e-13 Score=132.23 Aligned_cols=177 Identities=12% Similarity=0.065 Sum_probs=122.5
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
|||++|++|+++.+.. ...+.++++++|+ .+|+.+.+.+.+ .+.
T Consensus 8 VtGatG~iG~~l~~~L--~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~---------~~~-- 74 (312)
T d1qyda_ 8 IVGGTGYIGKRIVNAS--ISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVD---------ALK-- 74 (312)
T ss_dssp EESTTSTTHHHHHHHH--HHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHH---------HHT--
T ss_pred EECCCCHHHHHHHHHH--HhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhh---------hcc--
Confidence 8999999999995532 2223334333432 578888888877 665
Q ss_pred CCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHH
Q psy16545 66 DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKT 145 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~s 145 (600)
+.++++|+++.... ..|..++.+++++|.+.+..++++.||.++++. .+..+. .|...|..+
T Consensus 75 ~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~------~~~~~~-~~~~~~~~~ 136 (312)
T d1qyda_ 75 QVDVVISALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPD------IMEHAL-QPGSITFID 136 (312)
T ss_dssp TCSEEEECCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTT------SCCCCC-SSTTHHHHH
T ss_pred Ccchhhhhhhhccc-----------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCC------Cccccc-chhhhhhHH
Confidence 78999999876422 234556778899999988778888898665442 233444 566778888
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceEE
Q psy16545 146 KHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKVV 225 (600)
Q Consensus 146 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~d 225 (600)
|..++...+. . +++++++||+.+||+.... +.+.+..... ..+.+.++++|.+.++++++.|
T Consensus 137 ~~~~~~~~~~----~-~~~~~i~r~~~~~g~~~~~------------~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~v~D 198 (312)
T d1qyda_ 137 KRKVRRAIEA----A-SIPYTYVSSNMFAGYFAGS------------LAQLDGHMMP-PRDKVLIYGDGNVKGIWVDEDD 198 (312)
T ss_dssp HHHHHHHHHH----T-TCCBCEEECCEEHHHHTTT------------SSCTTCCSSC-CSSEECCBTTSCSEEEEECHHH
T ss_pred HHHHHHhhcc----c-ccceEEeccceeecCCccc------------hhhHHHHhhh-cccccccccccccccceeeHHH
Confidence 8777765433 3 8899999999999985321 1111111122 4467888999999999999999
Q ss_pred eeecccccc
Q psy16545 226 AIDNFVNSV 234 (600)
Q Consensus 226 ~v~~~~~a~ 234 (600)
+++.+..++
T Consensus 199 va~a~~~~l 207 (312)
T d1qyda_ 199 VGTYTIKSI 207 (312)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 988776654
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.25 E-value=8.2e-12 Score=119.74 Aligned_cols=150 Identities=13% Similarity=0.007 Sum_probs=113.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d 68 (600)
-|||+++-+|+.+++ ++...++.++..||+ .+|+++++++++++++ +.++. ++|
T Consensus 9 lVTGas~GIG~aia~--~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g~iD 81 (254)
T d1hdca_ 9 IITGGARGLGAEAAR--QAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAY-----AREEFGSVD 81 (254)
T ss_dssp EEETTTSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHH-----HHHHHSCCC
T ss_pred EEeCcCCHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHH-----HHHHcCCcc
Confidence 489999999998855 333334444444443 6899999999987766 54443 699
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
++|||||...... ..+++...+++|+.++.++++++. +.+-.++|++||...+. +. ...+
T Consensus 82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~-----------~~-~~~~ 149 (254)
T d1hdca_ 82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM-----------GL-ALTS 149 (254)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CC-TTCH
T ss_pred EEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcc-----------cc-cchh
Confidence 9999999864322 234567799999999999998863 44557999999976532 12 4568
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.|+.||.+.+.+++.++.++ .|+++..+.||.+..+
T Consensus 150 ~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~ 187 (254)
T d1hdca_ 150 SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP 187 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc
Confidence 99999999999999999876 3899999999998765
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.25 E-value=1.4e-11 Score=118.85 Aligned_cols=151 Identities=14% Similarity=0.037 Sum_probs=111.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||+++.+|+.+++ ++...+.+++..+|+ .+|++|++++++++++ +.+.
T Consensus 8 lITGas~GIG~aiA~--~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~-----~~~~ 80 (260)
T d1x1ta1 8 VVTGSTSGIGLGIAT--ALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDN-----AVRQ 80 (260)
T ss_dssp EETTCSSHHHHHHHH--HHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHH-----HHHH
T ss_pred EEeCCCCHHHHHHHH--HHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-----HHHH
Confidence 479999999988854 222233333333332 6899999999887665 4443
Q ss_pred C-CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 65 H-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 ~-~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
. ++|++|||||...... ..+++...+++|+.++.++++++ ++++-.++|++||..... +.
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~-----------~~ 149 (260)
T d1x1ta1 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV-----------AS 149 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CC
T ss_pred hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccccee-----------cc
Confidence 3 5999999999875422 23567789999999999998876 444557999999975432 12
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+....|+.||.+.+.+++.++.++ .|++++.+.||.|-.|.
T Consensus 150 -~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~ 192 (260)
T d1x1ta1 150 -ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPL 192 (260)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred -CCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChh
Confidence 456789999999999999999886 38999999999997764
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.25 E-value=1.3e-11 Score=117.49 Aligned_cols=126 Identities=16% Similarity=0.119 Sum_probs=99.1
Q ss_pred CccEEecccccccccChHHhhhHHhhhhcccccccC-CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH
Q psy16545 30 PVPYIVEARREGDIVSMYANTDLAQKELGWSARCTH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM 104 (600)
Q Consensus 30 ~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~ 104 (600)
.+.++ .+|++|.+++.+++++ +.++. ++|++|||||...... ..+++...+++|+.|+..+++++
T Consensus 58 ~~~~~-----~~Dvt~~~~v~~~~~~-----~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~ 127 (240)
T d2bd0a1 58 LTDTI-----TADISDMADVRRLTTH-----IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQAL 127 (240)
T ss_dssp EEEEE-----ECCTTSHHHHHHHHHH-----HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cEEEE-----EecCCCHHHHHHHHHH-----HHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHH
Confidence 34566 7899999999987766 55543 5999999999874422 23567779999999999998886
Q ss_pred H----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 105 K----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 105 ~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. +++-.++|++||...+. +. +..++|+.||.+.+.+++.++.++ .|++++.+.||.+-.+.
T Consensus 128 ~~~m~~~~~G~Ii~isS~~~~~-----------~~-~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~ 194 (240)
T d2bd0a1 128 FALMERQHSGHIFFITSVAATK-----------AF-RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM 194 (240)
T ss_dssp HHHHHHHTCEEEEEECCGGGTS-----------CC-TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT
T ss_pred hHHHHhcCCCceEEEechhhcC-----------CC-CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCch
Confidence 3 44557899999976543 12 456789999999999999998876 38999999999998774
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.25 E-value=1.1e-11 Score=118.75 Aligned_cols=151 Identities=15% Similarity=0.099 Sum_probs=113.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||+++.+|+.+++ .+...+.+++..+|+ .+|+++++++.+++++ +.++.
T Consensus 14 lITGas~GIG~a~a~--~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~-----~~~~~g 86 (251)
T d2c07a1 14 LVTGAGRGIGREIAK--MLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK-----ILTEHK 86 (251)
T ss_dssp EEESTTSHHHHHHHH--HHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH-----HHHHCS
T ss_pred EEeCCCCHHHHHHHH--HHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-----HHHhcC
Confidence 589999999999855 333444444444443 6899999999887666 55444
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|++|||||...... ..+++...+++|+.++..+++++ ++.+-.++|++||....-. . .
T Consensus 87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~-----------~-~ 154 (251)
T d2c07a1 87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG-----------N-V 154 (251)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-----------C-T
T ss_pred CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCC-----------C-C
Confidence 6999999999865422 22467779999999999998875 3445579999999754321 1 3
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
...+|+.||.+.+.+++.++.++ .|+++..+.||.+-.+.
T Consensus 155 ~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~ 196 (251)
T d2c07a1 155 GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDM 196 (251)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccc
Confidence 45789999999999999999876 38999999999998774
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.24 E-value=1.2e-11 Score=119.23 Aligned_cols=149 Identities=15% Similarity=0.049 Sum_probs=112.6
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-C
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH-D 66 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~ 66 (600)
|||+++.+|+.++. ++...++.++..+|+ .+|++|++++++++++ +.+++ +
T Consensus 7 ITGas~GIG~aia~--~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~-----~~~~~g~ 79 (257)
T d2rhca1 7 VTGATSGIGLEIAR--RLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA-----VVERYGP 79 (257)
T ss_dssp EESCSSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHTCS
T ss_pred EeCCCCHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH-----HHHHhCC
Confidence 78999999998854 222333333333433 6899999999997776 66554 5
Q ss_pred CCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH------cCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS------HGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~------~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
+|++|||||...... ..+++...+++|+.++.++++++.+ .+..++|++||...+-. .
T Consensus 80 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~-----------~- 147 (257)
T d2rhca1 80 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG-----------V- 147 (257)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSC-----------C-
T ss_pred CCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccc-----------c-
Confidence 999999999864422 2356778999999999999998743 34468999998754321 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+....|+.||.+.+.+++.++.++ .|++++.+.||.|-.|
T Consensus 148 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 189 (257)
T d2rhca1 148 VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 189 (257)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCH
Confidence 456789999999999999999886 3799999999998765
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.24 E-value=1.3e-11 Score=118.34 Aligned_cols=152 Identities=15% Similarity=0.055 Sum_probs=110.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
-|||+++.+|+.+++. +...+..++..||+ .+|+++++++.+++++ +.++.
T Consensus 9 lITGas~GIG~aia~~--la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~ 81 (251)
T d1vl8a_ 9 LVTGGSRGLGFGIAQG--LAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEA-----VKEKF 81 (251)
T ss_dssp EEETTTSHHHHHHHHH--HHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEeCCCCHHHHHHHHH--HHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHH-----HHHHc
Confidence 3799999999988442 22222233322322 7899999999887665 54433
Q ss_pred -CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 -~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|++|||||...... +.+++...+++|+.++..+.+++.+ .+-.++|++||....-. +.
T Consensus 82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~----------~~- 150 (251)
T d1vl8a_ 82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV----------TM- 150 (251)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC----------CS-
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccc----------cC-
Confidence 6999999999864322 3356777999999999999988644 34569999998643211 11
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.....|+.||.+.+.+++.++.++ .|+++..+.||.+-.+.
T Consensus 151 ~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~ 193 (251)
T d1vl8a_ 151 PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM 193 (251)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTT
T ss_pred ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHH
Confidence 345789999999999999999876 38999999999998774
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.23 E-value=1.7e-11 Score=117.70 Aligned_cols=150 Identities=14% Similarity=0.117 Sum_probs=112.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||+++.+|+.+++ .+...+..++..+|+ .+|+++++++++++++ +.+..
T Consensus 15 lITGas~GIG~aia~--~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~-----~~~~~g 87 (255)
T d1fmca_ 15 IITGAGAGIGKEIAI--TFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADF-----AISKLG 87 (255)
T ss_dssp EETTTTSHHHHHHHH--HHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHHS
T ss_pred EEeCCCcHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH-----HHHHcC
Confidence 589999999999854 333333344434433 6899999999887766 55443
Q ss_pred CCCEEEEcCcccCccc---CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE---SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~---~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
++|++|||||...... +.+++...+++|+.++.++.+++. +.+-.++|++||...... . +.
T Consensus 88 ~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~-----------~-~~ 155 (255)
T d1fmca_ 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----------N-IN 155 (255)
T ss_dssp SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------C-TT
T ss_pred CCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcc-----------c-cc
Confidence 6999999999864322 335577799999999999988763 334568999999754421 2 45
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.+.|+.||.+.+.+++.++.++ .|+++..+.||.|-.+
T Consensus 156 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 195 (255)
T d1fmca_ 156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTD 195 (255)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSH
T ss_pred cccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcCh
Confidence 6899999999999999999886 3899999999999766
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.23 E-value=1.4e-11 Score=117.59 Aligned_cols=149 Identities=12% Similarity=0.001 Sum_probs=111.3
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
|||+++.+|+.+++ ++...+.+++..+++ .+|++|++++++++++ +.++.
T Consensus 6 ITGas~GIG~a~a~--~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g 78 (244)
T d1edoa_ 6 VTGASRGIGKAIAL--SLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKT-----AIDAWG 78 (244)
T ss_dssp ETTCSSHHHHHHHH--HHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHH-----HHHHSS
T ss_pred EeCCCcHHHHHHHH--HHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHH-----HHHHcC
Confidence 78999999988854 222233333322221 6899999999887766 55543
Q ss_pred CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|++|||||...... ..++++..+++|+.++.++.+++ ++++-.++|++||...+- +. .
T Consensus 79 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~-----------~~-~ 146 (244)
T d1edoa_ 79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI-----------GN-I 146 (244)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CC-T
T ss_pred CCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcC-----------CC-C
Confidence 5999999999864322 33567789999999999998886 344557999999976432 11 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
....|+.||.+.+.+++.++.++ .|+++..+.||.+-.+
T Consensus 147 ~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~ 187 (244)
T d1edoa_ 147 GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASD 187 (244)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSH
T ss_pred CCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccH
Confidence 56789999999999999999886 3899999999988765
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.22 E-value=1.3e-11 Score=118.69 Aligned_cols=149 Identities=13% Similarity=0.024 Sum_probs=110.3
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
|||+++-+|+.++. .+...+.+++..||+ .+|++|++++++++++ +.++.
T Consensus 9 ITGas~GIG~aia~--~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~-----~~~~~ 81 (258)
T d1iy8a_ 9 ITGGGSGLGRATAV--RLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTA-----TTERF 81 (258)
T ss_dssp EETTTSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHH-----HHHHH
T ss_pred EeCCCCHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHH-----HHHHh
Confidence 78999889988843 222223333333332 6899999999987766 55443
Q ss_pred -CCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 66 -~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
++|++|||||...... +.+++...+++|+.++.++.+++. +.+-.++|++||....- +.
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-----------~~ 150 (258)
T d1iy8a_ 82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR-----------GI 150 (258)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------BC
T ss_pred CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhcc-----------CC
Confidence 5999999999753322 335677899999999999998763 34557899999975432 12
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+...+|+.||.+.+.+++.++.++ .|++++.+.||.+..|
T Consensus 151 -~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~ 192 (258)
T d1iy8a_ 151 -GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTP 192 (258)
T ss_dssp -SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSH
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCH
Confidence 456899999999999999998876 3899999999999766
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.21 E-value=2.3e-11 Score=116.94 Aligned_cols=151 Identities=12% Similarity=0.054 Sum_probs=113.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d 68 (600)
-|||+++.+|+.+++ .+...+.+++..||+ .+|+++++++.+++++ +.++. ++|
T Consensus 9 lVTGas~GIG~aia~--~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~-----~~~~~g~iD 81 (256)
T d1k2wa_ 9 LITGSARGIGRAFAE--AYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAE-----LLDRWGSID 81 (256)
T ss_dssp EEETCSSHHHHHHHH--HHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHH-----HHHHHSCCC
T ss_pred EEeCCCCHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHH-----HHHHhCCcc
Confidence 379999999999854 333334444444444 6899999999997766 54433 699
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----Hc-CCCeEEEecCccccCCCCCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SH-GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIK 139 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~-~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~ 139 (600)
++|||||...... ..+++...+++|+.|+..+++++. +. .-.++|++||....- +. +..
T Consensus 82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~-----------~~-~~~ 149 (256)
T d1k2wa_ 82 ILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR-----------GE-ALV 149 (256)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CC-TTC
T ss_pred EEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc-----------cc-ccc
Confidence 9999999864322 235577799999999999998753 22 346899999976432 12 456
Q ss_pred ChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 140 NVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 140 s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
..|+.||.+.+.+++.++.++ .|++++.+.||.+-.|.
T Consensus 150 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~ 189 (256)
T d1k2wa_ 150 GVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH 189 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred cchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchh
Confidence 889999999999999999876 38999999999888774
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.21 E-value=2.2e-11 Score=117.14 Aligned_cols=149 Identities=13% Similarity=0.046 Sum_probs=110.5
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-C
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH-D 66 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~ 66 (600)
|||+++.+|+.++. ++...+..++..||+ .+|+++++++.+++++ +.+.. +
T Consensus 6 ITGas~GIG~aia~--~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g~ 78 (255)
T d1gega_ 6 VTGAGQGIGKAIAL--RLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQ-----ARKTLGG 78 (255)
T ss_dssp EETTTSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH-----HHHHTTC
T ss_pred EcCCccHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH-----HHHHhCC
Confidence 78999999988854 222233333333433 6899999999997776 55544 5
Q ss_pred CCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcC-CCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG-VYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
+|++|||||...... +.+++...+++|+.|+.++++++. +.+ -.++|++||...+. +. +
T Consensus 79 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-----------~~-~ 146 (255)
T d1gega_ 79 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV-----------GN-P 146 (255)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CC-T
T ss_pred ccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc-----------cC-c
Confidence 999999999864322 235567799999999999998853 333 35799999876432 12 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
..+.|+.||.+.+.+++.++.++ .|++++.+.||.+-.|
T Consensus 147 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 187 (255)
T d1gega_ 147 ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP 187 (255)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred ccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccCh
Confidence 56789999999999999999876 3899999999998765
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.21 E-value=2.6e-11 Score=116.77 Aligned_cols=150 Identities=15% Similarity=0.111 Sum_probs=113.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||+++.+|+.+++ ++...+.+++..||+ .+|+++++++++++++ +.++.
T Consensus 12 lITGas~GIG~aia~--~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~~ 84 (259)
T d2ae2a_ 12 LVTGGSRGIGYGIVE--ELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNT-----VANHFH 84 (259)
T ss_dssp EEESCSSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH-----HHHHTT
T ss_pred EEeCCCCHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHH-----HHHHhC
Confidence 489999999999855 333334444444544 5899999998886665 54443
Q ss_pred -CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 -~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.+|++|||||...... +.+++...+++|+.++..+.+++. +.+-.++|++||..... +.
T Consensus 85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-----------~~- 152 (259)
T d2ae2a_ 85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL-----------AV- 152 (259)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS-----------CC-
T ss_pred CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc-----------cc-
Confidence 4899999999864322 235677799999999999988864 34556899999975432 12
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+..+.|+.||.+.+.+++.++.++ .+++++.+.||.|-.|
T Consensus 153 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 194 (259)
T d2ae2a_ 153 PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATS 194 (259)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSH
T ss_pred ccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCH
Confidence 456889999999999999999886 3899999999998765
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.20 E-value=1.4e-11 Score=117.92 Aligned_cols=149 Identities=16% Similarity=0.065 Sum_probs=112.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------cccccChHHhhhHHhhhhcccccccC-CCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------EGDIVSMYANTDLAQKELGWSARCTH-DIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~ 69 (600)
-|||+++-+|+.+++ .+...+.+++..||+ .+|++|++++++++++ +.++. ++|+
T Consensus 10 lITGas~GIG~aia~--~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~-----~~~~~g~iDi 82 (250)
T d1ydea1 10 VVTGGGRGIGAGIVR--AFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSE-----TIRRFGRLDC 82 (250)
T ss_dssp EEETCSSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHH-----HHHHHSCCCE
T ss_pred EEeCCCCHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHH-----HHHhcCCCCE
Confidence 379999999999855 333344555555554 5899999999997766 55443 6999
Q ss_pred EEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 70 VIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 70 Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+|||||...... ..+++...+++|+.++.++++++.+ .+ .++|++||....-. . +...
T Consensus 83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~-----------~-~~~~ 149 (250)
T d1ydea1 83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIG-----------Q-AQAV 149 (250)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHC-----------C-TTCH
T ss_pred EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCccccccccccc-----------c-cCcc
Confidence 999999753322 2245778999999999999988643 33 58999999765321 2 4567
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+|+.||.+.+.+++.++.++ .+++++.+.||.|-.|
T Consensus 150 ~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~ 187 (250)
T d1ydea1 150 PYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTP 187 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred hhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCh
Confidence 99999999999999999886 3899999999998655
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.20 E-value=1.5e-11 Score=117.21 Aligned_cols=149 Identities=13% Similarity=0.011 Sum_probs=110.4
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-C
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH-D 66 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~ 66 (600)
|||+++.+|+.++.. +...+..++..||+ .+|++|++++.+++++ +.++. +
T Consensus 12 ITGas~GIG~~ia~~--la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~-----i~~~~g~ 84 (244)
T d1yb1a_ 12 ITGAGHGIGRLTAYE--FAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKK-----VKAEIGD 84 (244)
T ss_dssp EETTTSHHHHHHHHH--HHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHTCC
T ss_pred EeCCCcHHHHHHHHH--HHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH-----HHHHcCC
Confidence 799999999998542 22223333333333 7999999999987766 54444 5
Q ss_pred CCEEEEcCcccCcccCC----CChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
+|++|||||........ +.++..+++|+.|+.++++++ ++++-.++|++||....- +. +.
T Consensus 85 idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~-----------~~-~~ 152 (244)
T d1yb1a_ 85 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV-----------SV-PF 152 (244)
T ss_dssp CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC-----------CH-HH
T ss_pred CceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC-----------CC-CC
Confidence 99999999987543322 346679999999999998875 455667899999976432 12 34
Q ss_pred CChHHHHHHHHHHHHHHHHhhc-----CCceEEEEecccccCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH-----KEWNIISLRYFNPVGA 176 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~-----~~~~~~ilR~~~v~G~ 176 (600)
.+.|+.||.+.+.+.+.++.+. .|++++.+.||.|-.+
T Consensus 153 ~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~ 195 (244)
T d1yb1a_ 153 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTG 195 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCCh
Confidence 5789999999999999998763 3799999999988665
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.20 E-value=3.3e-11 Score=116.10 Aligned_cols=151 Identities=16% Similarity=0.062 Sum_probs=110.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
-|||+++.+|+.+++. +...+.+++..+|+ .+|+++++++++++++ +.++.
T Consensus 11 lITGas~GIG~aia~~--la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~-----~~~~~ 83 (261)
T d1geea_ 11 VITGSSTGLGKSMAIR--FATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQS-----AIKEF 83 (261)
T ss_dssp EETTCSSHHHHHHHHH--HHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH-----HHHHH
T ss_pred EEeCCCcHHHHHHHHH--HHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-----HHHHh
Confidence 5899999999988542 22223333333332 6899999999887766 55443
Q ss_pred -CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCC-CeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGV-YQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 66 -~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~-~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
++|++|||||...... +.+++...+++|+.++.++.+++. +.+. .++|++||....- +.
T Consensus 84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~-----------~~ 152 (261)
T d1geea_ 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-----------PW 152 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------CC
T ss_pred CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc-----------cC
Confidence 6999999999875422 235677899999999999988763 3443 3588899975432 12
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+....|+.||.+.+.+++.++.++ .|+++..+.||.|..|.
T Consensus 153 -~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~ 195 (261)
T d1geea_ 153 -PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI 195 (261)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGG
T ss_pred -ccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHh
Confidence 345789999999999999999886 38999999999998763
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.18 E-value=4.9e-11 Score=115.55 Aligned_cols=155 Identities=11% Similarity=0.101 Sum_probs=112.8
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccC-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTH-D 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~ 66 (600)
-|||+++-+|+.+++. +...+.+++..||+ .+|+++++++++++++ +.+.+ +
T Consensus 10 lITGas~GIG~aia~~--la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g~ 82 (268)
T d2bgka1 10 IITGGAGGIGETTAKL--FVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDT-----TIAKHGK 82 (268)
T ss_dssp EEESTTSHHHHHHHHH--HHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHH-----HHHHHSC
T ss_pred EEeCCCcHHHHHHHHH--HHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHH-----HHHHcCC
Confidence 4899999999998542 22333344444443 6899999999997765 54433 6
Q ss_pred CCEEEEcCcccCccc------CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGE------SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~------~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
+|++|||||...... ..+++...+++|+.++..+++++.+ ++-.++|++||...+-. ..
T Consensus 83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~----------~~- 151 (268)
T d2bgka1 83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTA----------GE- 151 (268)
T ss_dssp CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCC----------CT-
T ss_pred cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccc----------cc-
Confidence 999999999754321 2245667899999999999988743 35568999998754421 11
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCCCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAHPSG 180 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~ 180 (600)
.....|+.||.+.+.+++.++.++ .|+++..+.||.+-.|....
T Consensus 152 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~ 197 (268)
T d2bgka1 152 GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTD 197 (268)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTT
T ss_pred ccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhh
Confidence 223479999999999999999876 38999999999998886443
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.18 E-value=2.5e-11 Score=117.04 Aligned_cols=150 Identities=12% Similarity=0.030 Sum_probs=111.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||+++-+|+.+++. +...+..++..||+ .+|+++++++++++++ +.+..
T Consensus 9 lITGas~GIG~aia~~--la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~g 81 (260)
T d1zema1 9 LVTGAGGNIGLATALR--LAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDS-----VVRDFG 81 (260)
T ss_dssp EEETTTSHHHHHHHHH--HHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHH-----HHHHHS
T ss_pred EEeCCCCHHHHHHHHH--HHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH-----HHHHhC
Confidence 3789999999988442 22233333333333 6899999999887766 54443
Q ss_pred CCCEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 ~~d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
++|++||+||...... ..+++...+++|+.++.++++++. +.+-.++|++||...+-. .
T Consensus 82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~-----------~- 149 (260)
T d1zema1 82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG-----------P- 149 (260)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC-----------C-
T ss_pred CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccC-----------C-
Confidence 6999999999764321 234577799999999999998863 345579999999764421 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+...+|+.||.+.+.+++.++.++ .|++++.+.||.|-.+
T Consensus 150 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~ 191 (260)
T d1zema1 150 PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 191 (260)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence 345789999999999999999886 3899999999999876
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.18 E-value=4.1e-11 Score=114.04 Aligned_cols=146 Identities=14% Similarity=0.040 Sum_probs=108.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------cccccChHHhhhHHhhhhcccccccC-CCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------EGDIVSMYANTDLAQKELGWSARCTH-DIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~ 69 (600)
-|||+++.+|+.+++ ++...+..++..+|+ .+|++|++++++ ++++. ++|+
T Consensus 9 lITGas~GIG~aia~--~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~---------~~~~~g~iDi 77 (242)
T d1cyda_ 9 LVTGAGKGIGRDTVK--ALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEK---------ALGGIGPVDL 77 (242)
T ss_dssp EEESTTSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHH---------HHTTCCCCSE
T ss_pred EEeCCCcHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHH---------HHHHcCCCeE
Confidence 489999999999855 333333444444443 689999999988 44433 6999
Q ss_pred EEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH-----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 70 VIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS-----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 70 Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~-----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+|||||...... ..+++...+++|+.++..+.+++.+ ..-.++|++||...... . +...
T Consensus 78 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~-----------~-~~~~ 145 (242)
T d1cyda_ 78 LVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT-----------F-PNLI 145 (242)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------C-TTBH
T ss_pred EEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc-----------C-Cccc
Confidence 999999864422 3355777999999999999987632 23458999999764432 2 3457
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.|+.||.+.+.+++.++.++ .|+++..+.||.+-.|
T Consensus 146 ~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~ 183 (242)
T d1cyda_ 146 TYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTD 183 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTH
T ss_pred cccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCH
Confidence 89999999999999999876 3899999999998766
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.17 E-value=4.2e-11 Score=114.70 Aligned_cols=150 Identities=12% Similarity=0.019 Sum_probs=109.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccC-C
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTH-D 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~ 66 (600)
-|||+++.+|+.+++. +...+..++..+|+ .+|++|++++.+++++ +.+.. +
T Consensus 10 lVTGas~GIG~aia~~--la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~G~ 82 (251)
T d1zk4a1 10 IITGGTLGIGLAIATK--FVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDA-----TEKAFGP 82 (251)
T ss_dssp EETTTTSHHHHHHHHH--HHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHH-----HHHHHSS
T ss_pred EEeCCCCHHHHHHHHH--HHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHH-----HHHHhCC
Confidence 3899999999988442 22222233333332 7899999999887766 54432 6
Q ss_pred CCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCC-CeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGV-YQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~-~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
+|++|||||...... ..+++...+++|+.++.++.+++.. .+. .++|++||...+- +. +
T Consensus 83 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~-----------~~-~ 150 (251)
T d1zk4a1 83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV-----------GD-P 150 (251)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS-----------CC-T
T ss_pred ceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec-----------cC-C
Confidence 999999999874422 2345667999999999999998643 343 3789999975432 12 3
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc----CCceEEEEecccccCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH----KEWNIISLRYFNPVGA 176 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~~~v~G~ 176 (600)
....|+.||.+.+.+++.++.++ .|+++..+.||.+-.+
T Consensus 151 ~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~ 193 (251)
T d1zk4a1 151 SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTP 193 (251)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCH
T ss_pred CchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCCh
Confidence 45789999999999999888652 3899999999999766
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.17 E-value=5.2e-11 Score=113.54 Aligned_cols=147 Identities=16% Similarity=0.085 Sum_probs=110.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------cccccChHHhhhHHhhhhcccccccC-CCCE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------EGDIVSMYANTDLAQKELGWSARCTH-DIDC 69 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~ 69 (600)
-|||+++.+|+.+++ ++...+.+++..||+ .+|++|.+++++ ++++. ++|+
T Consensus 11 lITGas~GIG~aia~--~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~---------~~~~~g~iDi 79 (244)
T d1pr9a_ 11 LVTGAGKGIGRGTVQ--ALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATER---------ALGSVGPVDL 79 (244)
T ss_dssp EEESTTSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHH---------HHTTCCCCCE
T ss_pred EEeCCCCHHHHHHHH--HHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHH---------HHHHhCCceE
Confidence 489999999999955 333334445544544 579999999988 44332 6999
Q ss_pred EEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH-----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 70 VIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS-----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 70 Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~-----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+|||||...... +.+++...+++|+.++..+.+++.+ .+-.++|++||...... . +...
T Consensus 80 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-----------~-~~~~ 147 (244)
T d1pr9a_ 80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----------V-TNHS 147 (244)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------C-TTBH
T ss_pred EEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccc-----------c-cchh
Confidence 999999875422 2356777999999999999887633 23468999999765431 2 3457
Q ss_pred hHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.|+.||.+.+.+++.++.++ .+++++.+.||.|..+.
T Consensus 148 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~ 186 (244)
T d1pr9a_ 148 VYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM 186 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHH
T ss_pred hhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChH
Confidence 89999999999999999876 38999999999998763
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.16 E-value=6.9e-11 Score=113.69 Aligned_cols=151 Identities=15% Similarity=0.107 Sum_probs=104.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||+++.+|+.+++. +...+..++..+|+ .+|+++++++.+++++ +.+..
T Consensus 12 lVTGas~GIG~aiA~~--la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~~ 84 (259)
T d1xq1a_ 12 LVTGGTKGIGHAIVEE--FAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQT-----VSSMFG 84 (259)
T ss_dssp EETTTTSHHHHHHHHH--HHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH-----HHHHHT
T ss_pred EEeCCCCHHHHHHHHH--HHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHH-----HHHHhC
Confidence 4899999999988542 22233344444443 5899999998887665 55443
Q ss_pred -CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 -~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.+|++|||||...... ..+++...+++|+.++..+++++. +.+-.++|++||....- +.
T Consensus 85 g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~-----------~~- 152 (259)
T d1xq1a_ 85 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV-----------SA- 152 (259)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------
T ss_pred CCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccc-----------cc-
Confidence 4999999999865422 335677799999999999998863 44557999999975432 12
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.....|+.||.+.+.+++.++.++ .|+++..+.||.|-.|.
T Consensus 153 ~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~ 195 (259)
T d1xq1a_ 153 SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPL 195 (259)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---
T ss_pred cccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHH
Confidence 456889999999999999999886 38999999999998774
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.16 E-value=6.3e-11 Score=113.58 Aligned_cols=150 Identities=11% Similarity=0.021 Sum_probs=114.7
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------------cccccChHHhhhHHhhhhcccccccC-CCCEEEE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------EGDIVSMYANTDLAQKELGWSARCTH-DIDCVIH 72 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d~Vih 72 (600)
|||+++.+|+.++. ++...+..++..||+ .+|+++.+++.+++++ +.+++ ++|++||
T Consensus 5 VTGas~GiG~aiA~--~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~-----~~~~~G~iDiLVn 77 (252)
T d1zmta1 5 VTNVKHFGGMGSAL--RLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEA-----VTSAYGQVDVLVS 77 (252)
T ss_dssp ESSTTSTTHHHHHH--HHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHH-----HHHHHSCCCEEEE
T ss_pred EECCCCHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHH-----HHHHcCCCCEEEE
Confidence 79999999999965 555566777777765 4788888777776555 44443 5999999
Q ss_pred cCcccCccc-----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHH
Q psy16545 73 FAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYG 143 (600)
Q Consensus 73 ~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~ 143 (600)
|||...... ..+++...+++|+.++.++++++ ++++-.++|++||...+.. . .....|+
T Consensus 78 NAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~-----------~-~~~~~Y~ 145 (252)
T d1zmta1 78 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP-----------W-KELSTYT 145 (252)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC-----------C-TTCHHHH
T ss_pred CCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccc-----------c-ccccccc
Confidence 999753211 22456778999999999998886 3445579999999865432 2 3457899
Q ss_pred HHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 144 KTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 144 ~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.||.+.+.+++.++.++ .|+++..+.||.|-.+.
T Consensus 146 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~ 181 (252)
T d1zmta1 146 SARAGACTLANALSKELGEYNIPVFAIGPNYLHSED 181 (252)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBT
T ss_pred cccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcc
Confidence 99999999999999886 38999999999998775
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.14 E-value=7.5e-11 Score=112.99 Aligned_cols=150 Identities=11% Similarity=0.024 Sum_probs=111.4
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d 68 (600)
-|||+++.+|+.+++ ++...+.+++..||+ .+|+++.++++++.++ +.++. ++|
T Consensus 10 lITGas~GIG~aia~--~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~-----~~~~~g~iD 82 (253)
T d1hxha_ 10 LVTGGASGVGLEVVK--LLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAA-----VQRRLGTLN 82 (253)
T ss_dssp EETTTTSHHHHHHHH--HHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHH-----HHHHHCSCC
T ss_pred EEeCCCCHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHH-----HHHHhCCCC
Confidence 489999999999855 333344444444544 6899999998886665 44432 699
Q ss_pred EEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 69 CVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 69 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
++|||||...... ..+++...+++|+.++..+++++.+. .-.++|++||....- +. +...+
T Consensus 83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~-----------~~-~~~~~ 150 (253)
T d1hxha_ 83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL-----------PI-EQYAG 150 (253)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS-----------CC-TTBHH
T ss_pred eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhc-----------Cc-ccccc
Confidence 9999999865422 23557789999999999998887442 236899999975432 22 45678
Q ss_pred HHHHHHHHHHHHHHHHhhc----CCceEEEEecccccCC
Q psy16545 142 YGKTKHFIEEMLKDLSKAH----KEWNIISLRYFNPVGA 176 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~~~v~G~ 176 (600)
|+.||.+.+.+++.++.++ .++++..+.||.+..+
T Consensus 151 Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~ 189 (253)
T d1hxha_ 151 YSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTP 189 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCH
T ss_pred ccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCH
Confidence 9999999999999888764 2599999999998765
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.12 E-value=9.8e-11 Score=115.07 Aligned_cols=148 Identities=15% Similarity=0.093 Sum_probs=111.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------------cccccChHHhhhHHhhhhccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------------EGDIVSMYANTDLAQKELGWS 60 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------~~Dl~~~~~~~~~~~~~~~~~ 60 (600)
-|||+++-+|+.++. ++...+..++..|+. .+|+.+.+++++++++
T Consensus 11 lITGas~GIG~aiA~--~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~----- 83 (302)
T d1gz6a_ 11 LVTGAGGGLGRAYAL--AFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT----- 83 (302)
T ss_dssp EETTTTSHHHHHHHH--HHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH-----
T ss_pred EEeCCCCHHHHHHHH--HHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHH-----
Confidence 489999999999966 444555666655442 2577777776665554
Q ss_pred ccccC-CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCcccc-CCCCCCCCC
Q psy16545 61 ARCTH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVY-GEPQFLPIT 130 (600)
Q Consensus 61 ~~~~~-~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vy-g~~~~~~~~ 130 (600)
+++.. ++|++|||||...... ..+++...+++|+.|+.++++++ ++++-.++|++||.... +.
T Consensus 84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~------- 156 (302)
T d1gz6a_ 84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN------- 156 (302)
T ss_dssp HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-------
T ss_pred HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC-------
Confidence 44443 5999999999875422 23467779999999999999886 44555799999997543 32
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccC
Q psy16545 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVG 175 (600)
Q Consensus 131 E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G 175 (600)
.....|+.||.+.+.+++.++.+. .|++++.+.||.+--
T Consensus 157 ------~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t 197 (302)
T d1gz6a_ 157 ------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSR 197 (302)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCST
T ss_pred ------CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCc
Confidence 456899999999999999999886 389999999987643
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=1e-10 Score=114.65 Aligned_cols=150 Identities=13% Similarity=0.040 Sum_probs=109.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------------cccccChHHhhhHHhhhhcccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------------EGDIVSMYANTDLAQKELGWSA 61 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------------~~Dl~~~~~~~~~~~~~~~~~~ 61 (600)
-|||+++.+|+.+++. +...+..++..+|+ .+|++|++++.+++++ +
T Consensus 16 lITGas~GIG~aia~~--la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~-----~ 88 (297)
T d1yxma1 16 IVTGGATGIGKAIVKE--LLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS-----T 88 (297)
T ss_dssp EEETTTSHHHHHHHHH--HHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH-----H
T ss_pred EEeCCCCHHHHHHHHH--HHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH-----H
Confidence 4899999999988442 22223333333332 6899999999987665 5
Q ss_pred cccC-CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCC
Q psy16545 62 RCTH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITED 132 (600)
Q Consensus 62 ~~~~-~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~ 132 (600)
.+.. ++|++|||||...... ..+++...+++|+.++..+++++.+ .+-.++|++||....+.
T Consensus 89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~--------- 159 (297)
T d1yxma1 89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF--------- 159 (297)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC---------
T ss_pred HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccc---------
Confidence 4433 6999999999764322 2356777999999999999988743 33457888877543322
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 133 HPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 133 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+....|+.||.+.+.+++.++.++ .|+++..+.||.|..+.
T Consensus 160 ----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~ 202 (297)
T d1yxma1 160 ----PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT 202 (297)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred ----cccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcc
Confidence 345789999999999999999886 38999999999998763
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=8.1e-11 Score=111.45 Aligned_cols=112 Identities=13% Similarity=-0.005 Sum_probs=88.1
Q ss_pred CceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccccc
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYG 331 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg 331 (600)
..++...+|+.+.+.+.+++. ++|++||+++... ...+...+.+.|+.++.+++++|++.++++|||+||..+|+
T Consensus 59 ~~i~~~~~D~~~~~~~~~~~~--~~d~vi~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~ 133 (232)
T d2bkaa1 59 KNVNQEVVDFEKLDDYASAFQ--GHDVGFCCLGTTR---GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK 133 (232)
T ss_dssp GGCEEEECCGGGGGGGGGGGS--SCSEEEECCCCCH---HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT
T ss_pred ceeeeeeeccccccccccccc--ccccccccccccc---cccchhhhhhhcccccceeeecccccCccccccCCcccccc
Confidence 356777889999888888887 7899999997642 23456678899999999999999999999999999988764
Q ss_pred CCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCC-CeeEeecc-cCCCCc
Q psy16545 332 EPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNK-PVPYIFYN-LGTGQG 389 (600)
Q Consensus 332 ~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~-~~~~r~~~-~g~~~~ 389 (600)
. + .++|+.+| ..+|+.+.. .+.+ ++++||+. +|+++.
T Consensus 134 ~-------------~-~~~Y~~~K---~~~E~~l~~----~~~~~~~IlRP~~i~G~~~~ 172 (232)
T d2bkaa1 134 S-------------S-NFLYLQVK---GEVEAKVEE----LKFDRYSVFRPGVLLCDRQE 172 (232)
T ss_dssp T-------------C-SSHHHHHH---HHHHHHHHT----TCCSEEEEEECCEEECTTGG
T ss_pred C-------------c-cchhHHHH---HHhhhcccc----ccccceEEecCceeecCCCc
Confidence 3 1 26799999 667877654 3554 78999987 554433
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.09 E-value=1.7e-11 Score=120.43 Aligned_cols=172 Identities=12% Similarity=0.039 Sum_probs=115.1
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc------------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
|||++|++|+++.+.. ...+.++++++|. .+|+.+...+.+ .+.
T Consensus 8 VtGatG~iG~~l~~~L--~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---------~~~- 75 (307)
T d1qyca_ 8 LIGATGYIGRHVAKAS--LDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVE---------AVK- 75 (307)
T ss_dssp EESTTSTTHHHHHHHH--HHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHH---------HHH-
T ss_pred EECCCcHHHHHHHHHH--HHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhh---------hhh-
Confidence 8999999999995533 2334455555553 356666666555 454
Q ss_pred CCCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHH
Q psy16545 65 HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGK 144 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~ 144 (600)
+.+.|+|+++... ..++.++++++...+++++++.||...+. ++.... .+...+..
T Consensus 76 -~~~~vi~~~~~~~---------------~~~~~~~~~a~~~~~~~~~~~~s~~~~~~-------~~~~~~-~~~~~~~~ 131 (307)
T d1qyca_ 76 -NVDVVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFPSEFGNDV-------DNVHAV-EPAKSVFE 131 (307)
T ss_dssp -TCSEEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEECSCCSSCT-------TSCCCC-TTHHHHHH
T ss_pred -hceeeeecccccc---------------cchhhHHHHHHHHhccccceeeecccccc-------cccccc-cccccccc
Confidence 7889999886542 23456788899998888889888864432 222233 33445666
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEecccccCCCCCCCCCCCCCCcccchhHHHHHhhcCCCCeEEEecCCcccccCcceE
Q psy16545 145 TKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHPSGRIGEDPTKSFTNIMPYLAQVAIGSKPHFTVFGADYETEDGTGKV 224 (600)
Q Consensus 145 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~g~~~~~~~~v~ 224 (600)
.+...+..++. . +++++++||+++||+.... +...+.. .. +++...+++++.+.++++|++
T Consensus 132 ~~~~~~~~~~~----~-~~~~~i~r~~~v~g~~~~~------------~~~~~~~-~~-~~~~~~~~~~~~~~~~~i~v~ 192 (307)
T d1qyca_ 132 VKAKVRRAIEA----E-GIPYTYVSSNCFAGYFLRS------------LAQAGLT-AP-PRDKVVILGDGNARVVFVKEE 192 (307)
T ss_dssp HHHHHHHHHHH----H-TCCBEEEECCEEHHHHTTT------------TTCTTCS-SC-CSSEEEEETTSCCEEEEECHH
T ss_pred ccccccchhhc----c-CCCceecccceecCCCccc------------hhhhhhh-hh-hcccceeeecccccccCCcHH
Confidence 66666665544 3 8899999999999985321 1222222 22 446778899999999999999
Q ss_pred Eeeeccccccc
Q psy16545 225 VAIDNFVNSVH 235 (600)
Q Consensus 225 d~v~~~~~a~~ 235 (600)
|+++.+..++.
T Consensus 193 Dva~~~~~~l~ 203 (307)
T d1qyca_ 193 DIGTFTIKAVD 203 (307)
T ss_dssp HHHHHHHTTSS
T ss_pred HHHHHHHHHhc
Confidence 99987776643
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.09 E-value=1.6e-10 Score=111.52 Aligned_cols=150 Identities=13% Similarity=0.063 Sum_probs=103.6
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc------------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
|||+++.+|+.++. ++...+.+++..+|+ .+|+++++++++++++ +.+.
T Consensus 10 VTGas~GIG~aia~--~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~-----~~~~ 82 (264)
T d1spxa_ 10 ITGSSNGIGRATAV--LFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILST-----TLGK 82 (264)
T ss_dssp ETTTTSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH-----HHHH
T ss_pred EeCcCCHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHH-----HHHH
Confidence 79999999998854 222222333333332 6899999999887665 5443
Q ss_pred C-CCCEEEEcCcccCccc--------CCCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccc-cCCCCCCCCCC
Q psy16545 65 H-DIDCVIHFAAVKAVGE--------SMQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTV-YGEPQFLPITE 131 (600)
Q Consensus 65 ~-~~d~Vih~A~~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~v-yg~~~~~~~~E 131 (600)
. ++|++|||||...... ..++++..+++|+.++.++.+++.+. +-.++|.++|+.. ..
T Consensus 83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~--------- 153 (264)
T d1spxa_ 83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH--------- 153 (264)
T ss_dssp HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS---------
T ss_pred hCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccc---------
Confidence 3 6999999999753211 22456779999999999999887432 2235666666432 21
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 132 DHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 132 ~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+. +....|+.||.+.+.+++.++.++ .|++++.+.||.|-.+.
T Consensus 154 --~~-~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~ 198 (264)
T d1spxa_ 154 --AT-PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF 198 (264)
T ss_dssp --CC-TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred --cC-CCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence 11 345779999999999999999886 38999999999998774
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.09 E-value=5.4e-11 Score=117.39 Aligned_cols=202 Identities=13% Similarity=0.097 Sum_probs=133.0
Q ss_pred HHHHHhhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEE
Q psy16545 243 IRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLV 322 (600)
Q Consensus 243 l~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v 322 (600)
......+...+++++.+|+.+...+.+.+. +.+.++|+++..... .|..++.+++++|++.+..+++
T Consensus 45 ~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~--~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~a~~~~~~~~v 111 (312)
T d1qyda_ 45 VQMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVISALAGGVLS-----------HHILEQLKLVEAIKEAGNIKRF 111 (312)
T ss_dssp HHHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEECCCCSSSS-----------TTTTTHHHHHHHHHHSCCCSEE
T ss_pred HHHHhhhccCCcEEEEeecccchhhhhhcc--Ccchhhhhhhhcccc-----------cchhhhhHHHHHHHHhcCCcEE
Confidence 344555667789999999999999999988 789999998764322 3555678899999998878888
Q ss_pred EecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeeccc-CCCCcchHHHHHHHHHH
Q psy16545 323 FSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL-GTGQGTSVLQLLRTFER 401 (600)
Q Consensus 323 ~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~-g~~~~~~~~~~~~~~~~ 401 (600)
+.||..+++.. +..+..+. ..|.. .+..+..+....+++++++|++.+ |+..+..
T Consensus 112 ~~Ss~g~~~~~------~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~---------- 167 (312)
T d1qyda_ 112 LPSEFGMDPDI------MEHALQPG-SITFI-------DKRKVRRAIEAASIPYTYVSSNMFAGYFAGSL---------- 167 (312)
T ss_dssp ECSCCSSCTTS------CCCCCSST-THHHH-------HHHHHHHHHHHTTCCBCEEECCEEHHHHTTTS----------
T ss_pred EEeeccccCCC------cccccchh-hhhhH-------HHHHHHHhhcccccceEEeccceeecCCccch----------
Confidence 88986665432 22222222 33333 445556667778999999998773 2111000
Q ss_pred HhCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCcc
Q psy16545 402 VTGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGT 481 (600)
Q Consensus 402 ~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 481 (600)
+ +. ..... ..+.++.+ +++|++.
T Consensus 168 -------~-------~~------------------~~~~~---------------------~~~~~~~~----~~~g~~~ 190 (312)
T d1qyda_ 168 -------A-------QL------------------DGHMM---------------------PPRDKVLI----YGDGNVK 190 (312)
T ss_dssp -------S-------CT------------------TCCSS---------------------CCSSEECC----BTTSCSE
T ss_pred -------h-------hH------------------HHHhh---------------------hccccccc----ccccccc
Confidence 0 00 00000 00122222 2333333
Q ss_pred cchhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCCc-ee-EeEcCCCCCccHHHHHHHHhhhcCCccc
Q psy16545 482 SVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVP-YI-FYNLGTGQGTSVLQLLRTFERVTGKPVP 559 (600)
Q Consensus 482 ~~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~~-~~-~~nl~~~~~~s~~e~~~~~~~~~g~~~~ 559 (600)
++|+| ++|+++++..++.++.. ++ +|++++++.+|++|+++.+++++|.+.+
T Consensus 191 ------~~~i~--------------------v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 244 (312)
T d1qyda_ 191 ------GIWVD--------------------EDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLD 244 (312)
T ss_dssp ------EEEEC--------------------HHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCE
T ss_pred ------cceee--------------------HHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCe
Confidence 88888 99999999998876533 44 5777777889999999999999998766
Q ss_pred ccccC
Q psy16545 560 YIVEA 564 (600)
Q Consensus 560 ~~~~~ 564 (600)
....+
T Consensus 245 ~~~i~ 249 (312)
T d1qyda_ 245 KIYIS 249 (312)
T ss_dssp ECCBC
T ss_pred EEECC
Confidence 65544
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.08 E-value=2.1e-10 Score=110.10 Aligned_cols=151 Identities=17% Similarity=0.131 Sum_probs=111.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc---------------------cccccChHHhhhHHhhhhcccccccC-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------------------EGDIVSMYANTDLAQKELGWSARCTH- 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~- 65 (600)
-|||+++.+|++++.. +...+..++..+|+ .+|+++.+++++++++ +.+..
T Consensus 10 lITGas~GIG~aia~~--la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~-----~~~~~~ 82 (258)
T d1ae1a_ 10 LVTGGSKGIGYAIVEE--LAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQT-----VAHVFD 82 (258)
T ss_dssp EEESCSSHHHHHHHHH--HHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHTT
T ss_pred EEeCCCCHHHHHHHHH--HHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHH-----HHHHhC
Confidence 4899999999988542 22223333333333 6899999998886665 55443
Q ss_pred -CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 66 -~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
.+|++||+||...... ..+++...+++|+.++..+.+++. +.+..++|++||...... .
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~-----------~- 150 (258)
T d1ae1a_ 83 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA-----------L- 150 (258)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC-----------C-
T ss_pred CCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccc-----------c-
Confidence 4899999999875422 235677899999999999988764 345679999999765321 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+....|+.+|.+.+.+++.++.++ .++++..+.||.+..|.
T Consensus 151 ~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~ 193 (258)
T d1ae1a_ 151 PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL 193 (258)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred ccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcc
Confidence 456789999999999999999886 38999999999998875
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=2.5e-10 Score=109.45 Aligned_cols=145 Identities=15% Similarity=0.012 Sum_probs=105.5
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
|||+++.+|+.+++.. ...+.+++..||+ .+|+++++++++++++ +.++.
T Consensus 8 ITGas~GIG~aia~~l--a~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~ 80 (254)
T d2gdza1 8 VTGAAQGIGRAFAEAL--LLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRK-----VVDHF 80 (254)
T ss_dssp EETTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHH-----HHHHH
T ss_pred EeCCCCHHHHHHHHHH--HHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHH-----HHHHc
Confidence 7899999999885422 2223333333332 6899999999887766 54433
Q ss_pred -CCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc----C---CCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH----G---VYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 -~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~---~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|++|||||... ..+++..+++|+.++.++.+++.+. + -.++|++||...+- +. +
T Consensus 81 G~iDilVnnAg~~~----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~-----------~~-~ 144 (254)
T d2gdza1 81 GRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM-----------PV-A 144 (254)
T ss_dssp SCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------CC-T
T ss_pred CCcCeecccccccc----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc-----------CC-C
Confidence 6999999999864 3577889999999999888887432 1 24699999976432 22 4
Q ss_pred CCChHHHHHHHHHHHHHH--HHhhc--CCceEEEEecccccCC
Q psy16545 138 IKNVYGKTKHFIEEMLKD--LSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~--~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
..+.|+.||.+.+.+++. ++.++ .|++++.+.||.|-.|
T Consensus 145 ~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~ 187 (254)
T d2gdza1 145 QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTA 187 (254)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSH
T ss_pred CccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCCh
Confidence 567899999999999986 34443 3899999999988655
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.07 E-value=2.7e-10 Score=110.45 Aligned_cols=149 Identities=12% Similarity=0.048 Sum_probs=107.1
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc------------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
|||+++.+|+.+++ ++...+..++..||+ .+|+++++++++++++ +.+.
T Consensus 9 ITGas~GIG~aia~--~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~~~~ 81 (274)
T d1xhla_ 9 ITGSSNGIGRSAAV--IFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT-----TLAK 81 (274)
T ss_dssp ETTCSSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH-----HHHH
T ss_pred EeCCCcHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHH-----HHHH
Confidence 79999999998854 222233333333332 6899999998887666 5543
Q ss_pred C-CCCEEEEcCcccCccc------CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCC
Q psy16545 65 H-DIDCVIHFAAVKAVGE------SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 65 ~-~~d~Vih~A~~~~~~~------~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
. ++|++|||||...... ..+++...+++|+.++..+.+++.. .+-.+++++||.....
T Consensus 82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~----------- 150 (274)
T d1xhla_ 82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ----------- 150 (274)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS-----------
T ss_pred cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc-----------
Confidence 3 5999999999753221 1234677999999999999988743 3445677777754322
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+. .....|+.||.+.+.+++.++.++ .|++++.+.||.|-.|
T Consensus 151 ~~-~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~ 194 (274)
T d1xhla_ 151 AH-SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATG 194 (274)
T ss_dssp CC-TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSS
T ss_pred cC-CCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCc
Confidence 11 345789999999999999998886 3899999999999766
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.06 E-value=5e-10 Score=108.48 Aligned_cols=149 Identities=13% Similarity=0.035 Sum_probs=104.3
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc------------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
|||+++-+|+.+++.. ...+..++..+|+ .+|+++++++++++++ +.++
T Consensus 10 VTGas~GIG~aia~~l--a~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~-----~~~~ 82 (272)
T d1xkqa_ 10 ITGSSNGIGRTTAILF--AQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINS-----TLKQ 82 (272)
T ss_dssp ETTCSSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHH-----HHHH
T ss_pred EeCcCcHHHHHHHHHH--HHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHH-----HHHH
Confidence 7999999999884422 2222222222221 7899999999887766 5444
Q ss_pred C-CCCEEEEcCcccCcccC--------CCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCc-cccCCCCCCCCCC
Q psy16545 65 H-DIDCVIHFAAVKAVGES--------MQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSC-TVYGEPQFLPITE 131 (600)
Q Consensus 65 ~-~~d~Vih~A~~~~~~~~--------~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~-~vyg~~~~~~~~E 131 (600)
. ++|++|||||....... ..++...+++|+.++..+++++... +-.++|+++|+ +...
T Consensus 83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~--------- 153 (272)
T d1xkqa_ 83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ--------- 153 (272)
T ss_dssp HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS---------
T ss_pred hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhcccc---------
Confidence 3 69999999998643221 1136678899999999999886432 22356666553 3221
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 132 DHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 132 ~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+. +....|+.||.+.+.+++.++.++ .|++++.+.||.|-.+
T Consensus 154 --~~-~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 197 (272)
T d1xkqa_ 154 --AQ-PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETG 197 (272)
T ss_dssp --CC-CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSS
T ss_pred --CC-CCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcch
Confidence 12 345789999999999999999876 3899999999998766
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.06 E-value=8.1e-10 Score=106.24 Aligned_cols=157 Identities=16% Similarity=0.024 Sum_probs=110.6
Q ss_pred cCCCCcchHHHHHHHhh-hccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhcccccc
Q psy16545 8 LGTGQGTSVLQLLRTFE-RVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~-~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
-|||+++.+|+.+++.. ++...+..++..+|+ .+|+++++++.++++.-..+.-..
T Consensus 10 lITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~ 89 (259)
T d1oaaa_ 10 VLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPE 89 (259)
T ss_dssp EESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCT
T ss_pred EEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhhhhc
Confidence 47999999999886532 222233444433333 689999998888654310110011
Q ss_pred cCCCCEEEEcCcccCccc-------CCCChhhhHHhHHHHHHHHHHHHHHc----C--CCeEEEecCccccCCCCCCCCC
Q psy16545 64 THDIDCVIHFAAVKAVGE-------SMQEPLMYYKNNLIATINLLEVMKSH----G--VYQLVFSSSCTVYGEPQFLPIT 130 (600)
Q Consensus 64 ~~~~d~Vih~A~~~~~~~-------~~~~~~~~~~~Nv~gt~~ll~a~~~~----~--~~r~I~~SS~~vyg~~~~~~~~ 130 (600)
...+|++||+||...... ..+++...+++|+.++..+.+++.+. + ..++|++||...+-
T Consensus 90 ~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~-------- 161 (259)
T d1oaaa_ 90 GLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ-------- 161 (259)
T ss_dssp TCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS--------
T ss_pred cCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC--------
Confidence 125789999999753211 11346678999999999999998654 1 24799999975432
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCC
Q psy16545 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGA 176 (600)
Q Consensus 131 E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~ 176 (600)
+. +....|+.||.+.+.+++.++.+.++++++.+.||.|-.+
T Consensus 162 ---~~-~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~ 203 (259)
T d1oaaa_ 162 ---PY-KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND 203 (259)
T ss_dssp ---CC-TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred ---CC-ccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCH
Confidence 22 4568899999999999999999888999999999998766
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.06 E-value=3.5e-10 Score=109.77 Aligned_cols=150 Identities=16% Similarity=0.138 Sum_probs=110.5
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhcccccccC-CCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCTH-DID 68 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~-~~d 68 (600)
-|||+++.+|+.+++ ++...+++++..||+ .+|+++.+++++++++ +.++. ++|
T Consensus 9 lITGas~GIG~aia~--~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~-----~~~~~g~id 81 (276)
T d1bdba_ 9 LITGGASGLGRALVD--RFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASR-----CVARFGKID 81 (276)
T ss_dssp EEETTTSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHH-----HHHHHSCCC
T ss_pred EEeCCCCHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHH-----HHHHhCCcc
Confidence 489999999999955 334444555555554 5799999988886665 44433 699
Q ss_pred EEEEcCcccCcccC-----CC----ChhhhHHhHHHHHHHHHHHHH----HcCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 69 CVIHFAAVKAVGES-----MQ----EPLMYYKNNLIATINLLEVMK----SHGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 69 ~Vih~A~~~~~~~~-----~~----~~~~~~~~Nv~gt~~ll~a~~----~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
++|||||....... .+ ++...+++|+.++..+++++. +.+ .++|++||....- +.
T Consensus 82 ilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~-----------~~ 149 (276)
T d1bdba_ 82 TLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFY-----------PN 149 (276)
T ss_dssp EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTS-----------TT
T ss_pred cccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhcc-----------CC
Confidence 99999997643221 11 256789999999999988863 334 5788888864321 11
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc-CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH-KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~ 177 (600)
+..+.|+.||.+.+.+++.++.++ +++++..+.||.|-.+.
T Consensus 150 -~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~ 191 (276)
T d1bdba_ 150 -GGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDL 191 (276)
T ss_dssp -SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCC
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCc
Confidence 345789999999999999999886 46999999999997664
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=5.3e-10 Score=108.96 Aligned_cols=145 Identities=13% Similarity=0.101 Sum_probs=109.3
Q ss_pred CCCCcchHHHHHHHhhhcc------------------------------CCCccEEecccccccccChHHhhhHHhhhhc
Q psy16545 9 GTGQGTSVLQLLRTFERVT------------------------------GKPVPYIVEARREGDIVSMYANTDLAQKELG 58 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~------------------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 58 (600)
|||+++-+|+++++..... +.++..+ .+|++|.+++.++.++
T Consensus 7 ITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~Dv~~~~~~~~~~~~--- 78 (285)
T d1jtva_ 7 ITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL-----QLDVRDSKSVAAARER--- 78 (285)
T ss_dssp ESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEE-----ECCTTCHHHHHHHHHT---
T ss_pred EccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEE-----eccccchHhhhhhhhh---
Confidence 7899999999885532211 1234556 7899999999986665
Q ss_pred ccccccCCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCC
Q psy16545 59 WSARCTHDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPIT 130 (600)
Q Consensus 59 ~~~~~~~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~ 130 (600)
+.+ ..+|++||+||...... ..+++...+++|+.|+.++.+++ ++++-.++|++||....-
T Consensus 79 --~~~-g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~-------- 147 (285)
T d1jtva_ 79 --VTE-GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM-------- 147 (285)
T ss_dssp --CTT-SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS--------
T ss_pred --ccc-cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcC--------
Confidence 433 56999999999875433 23456679999999999998885 445667999999975432
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 131 EDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 131 E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+. +..++|+.||.+.+.+.+.++.+. .|++++++.||.|-.+
T Consensus 148 ---~~-~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~ 191 (285)
T d1jtva_ 148 ---GL-PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA 191 (285)
T ss_dssp ---CC-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred ---CC-CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCCh
Confidence 22 456789999999999999999875 3899999999998765
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.05 E-value=7e-10 Score=104.88 Aligned_cols=117 Identities=15% Similarity=0.140 Sum_probs=85.8
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCcccc-------------ccChHHHHHHHHHHHHHHHHHHHHcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGES-------------MQEPLMYYKNNLIATINLLEVMKSHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~-------------~~~~~~~~~~Nv~gt~~ll~~~~~~~ 317 (600)
..+++++.+|+.+...+.++++ ++|+|||+|+....... ..+.......|+.++.++++.+....
T Consensus 46 ~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (252)
T d2q46a1 46 GGEADVFIGDITDADSINPAFQ--GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG 123 (252)
T ss_dssp TCCTTEEECCTTSHHHHHHHHT--TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT
T ss_pred cCCcEEEEeeeccccccccccc--cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc
Confidence 4578999999999999999998 88999999987543221 23455677889999999999999988
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~ 383 (600)
.+++.+.|+..++... .+. ..+..++ ....+.....+....+++++++||+.
T Consensus 124 ~~~~~~~s~~~~~~~~-----------~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~ilRp~~ 175 (252)
T d2q46a1 124 VKHIVVVGSMGGTNPD-----------HPL-NKLGNGN--ILVWKRKAEQYLADSGTPYTIIRAGG 175 (252)
T ss_dssp CSEEEEEEETTTTCTT-----------CGG-GGGGGCC--HHHHHHHHHHHHHHSSSCEEEEEECE
T ss_pred ccccccccccccCCCC-----------ccc-ccccccc--hhhhhhhhhhhhhcccccceeecceE
Confidence 8999999987665321 111 2222222 13344555666777899999999987
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=9.9e-10 Score=101.64 Aligned_cols=110 Identities=18% Similarity=0.182 Sum_probs=83.5
Q ss_pred CCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccc
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVY 330 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vY 330 (600)
..+++++.+|+.+.+.+.+++. ++|+|||+++....... ...+..++.++++++++++++|||++||..+|
T Consensus 45 ~~~~~~~~gD~~d~~~l~~al~--~~d~vi~~~g~~~~~~~-------~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~ 115 (205)
T d1hdoa_ 45 PRPAHVVVGDVLQAADVDKTVA--GQDAVIVLLGTRNDLSP-------TTVMSEGARNIVAAMKAHGVDKVVACTSAFLL 115 (205)
T ss_dssp CCCSEEEESCTTSHHHHHHHHT--TCSEEEECCCCTTCCSC-------CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred ccccccccccccchhhHHHHhc--CCCEEEEEeccCCchhh-------hhhhHHHHHHHHHHHHhcCCCeEEEEeeeecc
Confidence 4568999999999999999998 88999999886432211 23567889999999999999999999999988
Q ss_pred cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeeccc
Q psy16545 331 GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL 384 (600)
Q Consensus 331 g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~ 384 (600)
+.....+ +....|...| ..+|++++ ..+++++++||+.+
T Consensus 116 ~~~~~~~--------~~~~~~~~~~---~~~e~~l~----~~~~~~tiirp~~~ 154 (205)
T d1hdoa_ 116 WDPTKVP--------PRLQAVTDDH---IRMHKVLR----ESGLKYVAVMPPHI 154 (205)
T ss_dssp SCTTCSC--------GGGHHHHHHH---HHHHHHHH----HTCSEEEEECCSEE
T ss_pred CCCcccc--------ccccccchHH---HHHHHHHH----hcCCceEEEeccee
Confidence 6543221 1123566666 55666554 57999999998764
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.04 E-value=2.4e-10 Score=109.50 Aligned_cols=146 Identities=12% Similarity=-0.009 Sum_probs=106.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------ccccc-ChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIV-SMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~-~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||+++.+|..+++.. ...+.+.+.++++ .+|++ +.+++.+++++ +.++
T Consensus 9 lITGgs~GIG~~~A~~l--a~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~~~ 81 (254)
T d1sbya1 9 IFVAALGGIGLDTSREL--VKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKK-----IFDQ 81 (254)
T ss_dssp EEETTTSHHHHHHHHHH--HHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHH-----HHHH
T ss_pred EEecCCCHHHHHHHHHH--HHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHH-----HHHH
Confidence 47999999999885532 2223332222221 57887 55567665555 4443
Q ss_pred C-CCCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHc-------CCCeEEEecCccccCCCCCCCCCCCCCCC
Q psy16545 65 H-DIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-------GVYQLVFSSSCTVYGEPQFLPITEDHPTG 136 (600)
Q Consensus 65 ~-~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-------~~~r~I~~SS~~vyg~~~~~~~~E~~~~~ 136 (600)
. ++|++|||||... .+.++..+++|+.|+.++.+++.+. ...++|++||...+. +.
T Consensus 82 ~g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~-----------~~- 145 (254)
T d1sbya1 82 LKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN-----------AI- 145 (254)
T ss_dssp HSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------CC-
T ss_pred cCCCCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc-----------CC-
Confidence 3 6999999999763 4678889999999999999987442 235799999976542 22
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 137 NIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 137 ~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.....|+.||.+...+++.++.++ .+++++.+.||.|..+
T Consensus 146 ~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~ 187 (254)
T d1sbya1 146 HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP 187 (254)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCc
Confidence 456789999999999999999875 3899999999999876
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=3.7e-10 Score=108.38 Aligned_cols=152 Identities=14% Similarity=0.069 Sum_probs=108.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc-----------------------cccccChHHhhhHHhhhhccccccc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR-----------------------EGDIVSMYANTDLAQKELGWSARCT 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~ 64 (600)
-|||+++.+|.++++. +...+..++..+|+ .+|+++++++.+++++ +.++
T Consensus 14 lITGas~GIG~aiA~~--la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~-----~~~~ 86 (257)
T d1xg5a_ 14 LVTGASGGIGAAVARA--LVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA-----IRSQ 86 (257)
T ss_dssp EEESTTSHHHHHHHHH--HHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH-----HHHH
T ss_pred EEeCCCCHHHHHHHHH--HHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHH-----HHHh
Confidence 5899999999888432 22222222222222 7899999999997776 5544
Q ss_pred C-CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcC--CCeEEEecCccccCCCCCCCCCCCC
Q psy16545 65 H-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHG--VYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 65 ~-~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~--~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
. ++|++|||||...... +.+++...+++|+.++..+.+++ ++.+ -.++|++||...+.. .
T Consensus 87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~---------~ 157 (257)
T d1xg5a_ 87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------L 157 (257)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---------C
T ss_pred cCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC---------C
Confidence 3 5999999999864422 23567779999999999988776 3333 368999999764421 0
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc----CCceEEEEecccccCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH----KEWNIISLRYFNPVGA 176 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~~~v~G~ 176 (600)
|. .....|+.||.+.+.+++.++.+. .++++..+.||.+-.+
T Consensus 158 p~-~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~ 203 (257)
T d1xg5a_ 158 PL-SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ 203 (257)
T ss_dssp SC-GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred CC-cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCCh
Confidence 11 334669999999999999998653 4899999999877654
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.03 E-value=2.1e-09 Score=102.55 Aligned_cols=158 Identities=18% Similarity=0.074 Sum_probs=108.6
Q ss_pred CCCCcchHHHHHHHh-hhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccCCC
Q psy16545 9 GTGQGTSVLQLLRTF-ERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTHDI 67 (600)
Q Consensus 9 vtG~~g~~~~~l~~~-~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 67 (600)
|||+++-+|+.+++. .++...+.+++..+|+ .+|++|++++++++++.+. .....++
T Consensus 7 ITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~--~~~~~~i 84 (248)
T d1snya_ 7 ITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG--VTKDQGL 84 (248)
T ss_dssp ESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH--HHGGGCC
T ss_pred EeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHH--HhhcCCc
Confidence 799999999988653 2323333333333332 6899999998886664000 1112369
Q ss_pred CEEEEcCcccCccc-----CCCChhhhHHhHHHHHHHHHHHHHH----c-----------CCCeEEEecCccccCCCCCC
Q psy16545 68 DCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKS----H-----------GVYQLVFSSSCTVYGEPQFL 127 (600)
Q Consensus 68 d~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~----~-----------~~~r~I~~SS~~vyg~~~~~ 127 (600)
|++|||||...... ..+++...+++|+.|+..+++++.. . +..++|.+||....- .
T Consensus 85 DiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~--~-- 160 (248)
T d1snya_ 85 NVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI--Q-- 160 (248)
T ss_dssp SEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS--T--
T ss_pred ceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc--C--
Confidence 99999999864322 1233566899999999999888632 1 236899999964221 0
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 128 PITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 128 ~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
..+. .....|+.||.+...+++.++.++ .+++++.+.||.|-.+.
T Consensus 161 ----~~~~-~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m 207 (248)
T d1snya_ 161 ----GNTD-GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM 207 (248)
T ss_dssp ----TCCS-CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred ----CCCC-CChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence 0122 345689999999999999998776 38999999999998774
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.00 E-value=6.8e-10 Score=104.98 Aligned_cols=148 Identities=14% Similarity=0.003 Sum_probs=100.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------cccccChHHhhhHHhhhhcccccccCCCCEEEEc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHF 73 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~ 73 (600)
.|||++|++|+++.+.....+..+.++.+.|+ .+|+.+.+.+.+ +++ ++|+|||+
T Consensus 7 lVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~---------~~~--~~d~vi~~ 75 (252)
T d2q46a1 7 LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINP---------AFQ--GIDALVIL 75 (252)
T ss_dssp EEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHH---------HHT--TCSEEEEC
T ss_pred EEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeecccccccc---------ccc--cceeeEEE
Confidence 48999999999996543222333334433332 588888888888 776 79999999
Q ss_pred CcccCcccC-------------CCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 74 AAVKAVGES-------------MQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 74 A~~~~~~~~-------------~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
|+....... ........++|+.++.+++..+.....+...+.|+...+.... .... .+..
T Consensus 76 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~------~~~~-~~~~ 148 (252)
T d2q46a1 76 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH------PLNK-LGNG 148 (252)
T ss_dssp CCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTC------GGGG-GGGC
T ss_pred EeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCc------cccc-cccc
Confidence 987543221 1334557789999999999999998888999998876543211 0011 2234
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAHP 178 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~ 178 (600)
.|...+...+.+ ..+. +++++++||+++|||..
T Consensus 149 ~~~~~~~~~~~~----~~~~-~~~~~ilRp~~v~g~~~ 181 (252)
T d2q46a1 149 NILVWKRKAEQY----LADS-GTPYTIIRAGGLLDKEG 181 (252)
T ss_dssp CHHHHHHHHHHH----HHHS-SSCEEEEEECEEECSCT
T ss_pred chhhhhhhhhhh----hhcc-cccceeecceEEECCCc
Confidence 455555554443 3333 89999999999999963
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.99 E-value=7.6e-10 Score=106.45 Aligned_cols=145 Identities=14% Similarity=0.121 Sum_probs=108.2
Q ss_pred cCCCCcchHHHHHHHhhhccC----------------------------CCccEEecccccccccChHHhhhHHhhhhcc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG----------------------------KPVPYIVEARREGDIVSMYANTDLAQKELGW 59 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~----------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 59 (600)
-|||+++.+|+.+++.....+ .++.++ .+|++|.+++.++.++
T Consensus 13 lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~-----~~Dv~d~~~~~~~~~~---- 83 (259)
T d2fr1a1 13 LVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVA-----ACDVTDRESVRELLGG---- 83 (259)
T ss_dssp EEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEE-----ECCTTCHHHHHHHHHT----
T ss_pred EEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhcccccccc-----ccccchHHHHHHhhcc----
Confidence 589999999998855322111 123444 6899999998886665
Q ss_pred cccccCCCCEEEEcCcccCcccC----CCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccc-cCCCCCCCCCCCCC
Q psy16545 60 SARCTHDIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV-YGEPQFLPITEDHP 134 (600)
Q Consensus 60 ~~~~~~~~d~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~v-yg~~~~~~~~E~~~ 134 (600)
+.+...+|.|||+||....... ..+....+++|+.++.++.++++..+..++|++||... +|.
T Consensus 84 -i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~----------- 151 (259)
T d2fr1a1 84 -IGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGA----------- 151 (259)
T ss_dssp -SCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCC-----------
T ss_pred -ccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCC-----------
Confidence 4444569999999998754322 23355688999999999999998887789999999754 333
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhcCCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~ 177 (600)
...+.|+.+|...+.+.+++..+ |++++.+.||.+.+++
T Consensus 152 --~~~~~YaAaka~l~~la~~~~~~--Gi~v~~I~pg~~~~~g 190 (259)
T d2fr1a1 152 --PGLGGYAPGNAYLDGLAQQRRSD--GLPATAVAWGTWAGSG 190 (259)
T ss_dssp --TTCTTTHHHHHHHHHHHHHHHHT--TCCCEEEEECCBC---
T ss_pred --cccHHHHHHHHhHHHHHHHHHhC--CCCEEECCCCcccCCc
Confidence 45678999999999999888765 8999999999888763
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=98.99 E-value=5.2e-10 Score=107.59 Aligned_cols=158 Identities=16% Similarity=0.084 Sum_probs=108.1
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhcccccccC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCTH 65 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~ 65 (600)
-|||+++.+|+.+++. +...++.++..+|+ .+|+++++++.+++++ +.++.
T Consensus 13 lITGas~GIG~aia~~--la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~-----~~~~~ 85 (260)
T d1h5qa_ 13 IVTGGNRGIGLAFTRA--VAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQ-----IDADL 85 (260)
T ss_dssp EEETTTSHHHHHHHHH--HHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH-----HHHHS
T ss_pred EEeCCCCHHHHHHHHH--HHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHH-----HHHHh
Confidence 4899999999888542 22222233322222 7899999999887766 54443
Q ss_pred -CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH-----cCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 66 -DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS-----HGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 66 -~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~-----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
++|++|||||...... +.+++...+++|+.++.++.+++.+ ..-.+++..||......... .-.+.
T Consensus 86 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~----~~~~~ 161 (260)
T d1h5qa_ 86 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SLNGS 161 (260)
T ss_dssp CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ETTEE
T ss_pred CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccc----ccccC
Confidence 5999999999864322 2356777999999999999887532 23446666666554321100 00011
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.....|+.||.+.+.+++.++.++ .|+++..+.||.+-.+.
T Consensus 162 -~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~ 204 (260)
T d1h5qa_ 162 -LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQ 204 (260)
T ss_dssp -CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred -ccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcc
Confidence 345789999999999999998876 38999999999997663
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.97 E-value=1.4e-09 Score=102.85 Aligned_cols=145 Identities=12% Similarity=0.036 Sum_probs=105.9
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc------------cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAV 76 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~ 76 (600)
|||+++.+|+.+++ .+...+.+++..||+ .+|+++. ++.+.+ .+. ++|++|||||.
T Consensus 9 VTGas~GIG~aia~--~l~~~Ga~V~~~~r~~~~l~~~~~~~~~~Dv~~~--~~~~~~------~~g--~iD~lVnnAG~ 76 (234)
T d1o5ia_ 9 VLAASRGIGRAVAD--VLSQEGAEVTICARNEELLKRSGHRYVVCDLRKD--LDLLFE------KVK--EVDILVLNAGG 76 (234)
T ss_dssp EESCSSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHTCSEEEECCTTTC--HHHHHH------HSC--CCSEEEECCCC
T ss_pred EeCCCcHHHHHHHH--HHHHCCCEEEEEECCHHHHHhcCCcEEEcchHHH--HHHHHH------HhC--CCcEEEecccc
Confidence 79999999999965 444455666666665 4677653 333222 222 69999999997
Q ss_pred cCccc----CCCChhhhHHhHHHHHHHHHHHH----HHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q psy16545 77 KAVGE----SMQEPLMYYKNNLIATINLLEVM----KSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHF 148 (600)
Q Consensus 77 ~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~ 148 (600)
..... ..+++...+++|+.++..+.+++ ++.+..++|++||..... +. .....|+.||.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~-----------~~-~~~~~Y~asKaa 144 (234)
T d1o5ia_ 77 PKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS-----------PI-ENLYTSNSARMA 144 (234)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CC-TTBHHHHHHHHH
T ss_pred cCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccc-----------cc-cccccchhHHHH
Confidence 64322 23456778999999999998876 344556899999976443 22 456789999999
Q ss_pred HHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 149 IEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 149 ~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+.+++.++.++ .|+++..+.||.+-.+.
T Consensus 145 l~~ltk~lA~ela~~gIrVN~I~PG~v~T~~ 175 (234)
T d1o5ia_ 145 LTGFLKTLSFEVAPYGITVNCVAPGWTETER 175 (234)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHHHHHhcccCeEEeecccCccchhh
Confidence 999999999876 38999999999987764
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.96 E-value=1.2e-09 Score=105.68 Aligned_cols=151 Identities=15% Similarity=0.084 Sum_probs=110.3
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||+++.+|+.+++ .+...+..++..+++ .+|+++++++.+.+++ +.+.
T Consensus 22 lITGas~GIG~aia~--~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~-----~~~~~ 94 (272)
T d1g0oa_ 22 LVTGAGRGIGREMAM--ELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEE-----AVKIF 94 (272)
T ss_dssp EETTTTSHHHHHHHH--HHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEeCCCCHHHHHHHH--HHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHH-----HHHHh
Confidence 489999999999854 323333344433333 5899999998887665 4443
Q ss_pred CCCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNI 138 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p 138 (600)
.++|++||+|+...... ...++...+++|+.++..+++++... .-+++++++|...... +. ..
T Consensus 95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~----------~~-~~ 163 (272)
T d1g0oa_ 95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK----------AV-PK 163 (272)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS----------SC-SS
T ss_pred CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccc----------cc-cc
Confidence 26999999999875432 23456678999999999999998764 2257888877542211 22 45
Q ss_pred CChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 139 KNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 139 ~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
...|+.||.+.+.+++.++.++ .|++++.+.||.+-.+
T Consensus 164 ~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~ 203 (272)
T d1g0oa_ 164 HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD 203 (272)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred hhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCCh
Confidence 5779999999999999999876 3899999999998765
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.95 E-value=2.3e-09 Score=102.37 Aligned_cols=158 Identities=11% Similarity=-0.077 Sum_probs=103.4
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc------------------cccccChHHhhhHHhhhhccccccc---CCC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR------------------EGDIVSMYANTDLAQKELGWSARCT---HDI 67 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~------------------~~Dl~~~~~~~~~~~~~~~~~~~~~---~~~ 67 (600)
|||+++-+|..+++.....+..+.++..+|+ .+|+++.+++++++++ +.+. .++
T Consensus 8 ITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~-----i~~~~~~~~i 82 (250)
T d1yo6a1 8 VTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSK-----VGEIVGSDGL 82 (250)
T ss_dssp ESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHH-----HHHHHGGGCC
T ss_pred EeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHH-----HHHHhCCCCe
Confidence 7999999999885532211111223322222 6899999998886665 4332 359
Q ss_pred CEEEEcCcccCcccC-----CCChhhhHHhHHHHHHHHHHHHHH----c-----------CCCeEEEecCccccCCCCCC
Q psy16545 68 DCVIHFAAVKAVGES-----MQEPLMYYKNNLIATINLLEVMKS----H-----------GVYQLVFSSSCTVYGEPQFL 127 (600)
Q Consensus 68 d~Vih~A~~~~~~~~-----~~~~~~~~~~Nv~gt~~ll~a~~~----~-----------~~~r~I~~SS~~vyg~~~~~ 127 (600)
|++|||||....... .++++..+++|+.|+.++.+++.. . ...+++.+|+...+-...
T Consensus 83 dilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~-- 160 (250)
T d1yo6a1 83 SLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN-- 160 (250)
T ss_dssp CEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC--
T ss_pred EEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC--
Confidence 999999997643211 234567999999999999888632 1 124677777754332110
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 128 PITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 128 ~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
.. ..+. .+...|+.||++...+++.++.++ .|++++.+.||.|-.+
T Consensus 161 -~~-~~~~-~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~ 208 (250)
T d1yo6a1 161 -TS-GSAQ-FPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN 208 (250)
T ss_dssp -CS-TTSS-SCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---
T ss_pred -cc-cccc-hhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCC
Confidence 01 1122 345679999999999999999875 3899999999998765
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=98.95 E-value=4.9e-10 Score=106.43 Aligned_cols=146 Identities=14% Similarity=-0.001 Sum_probs=106.4
Q ss_pred CCCCcchHHHHHHHhhh---------------------ccCCCccEEecccccccccChHHhhhHHhhhhcccccccC-C
Q psy16545 9 GTGQGTSVLQLLRTFER---------------------VTGKPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTH-D 66 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~---------------------~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~-~ 66 (600)
|||+++.+|..+++... ..+.++.++ ++|+++++++++++++ +.+.. +
T Consensus 10 ItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-----~~Dls~~~~i~~~~~~-----i~~~~g~ 79 (241)
T d2a4ka1 10 VTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAV-----VADVSDPKAVEAVFAE-----ALEEFGR 79 (241)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEE-----ECCTTSHHHHHHHHHH-----HHHHHSC
T ss_pred EeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEE-----EecCCCHHHHHHHHHH-----HHHHhCC
Confidence 78999999988844221 112344555 7999999999987776 54433 5
Q ss_pred CCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCCCC
Q psy16545 67 IDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKN 140 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s 140 (600)
+|++||||+...... ..+++...+++|+.++..+.+++... .-+.++.+||.+... . +...
T Consensus 80 iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~------------~-~~~~ 146 (241)
T d2a4ka1 80 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG------------A-FGLA 146 (241)
T ss_dssp CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC------------H-HHHH
T ss_pred ccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccc------------c-cCcc
Confidence 999999999864322 23456679999999999999998654 234555555543221 1 3456
Q ss_pred hHHHHHHHHHHHHHHHHhhcC--CceEEEEecccccCCC
Q psy16545 141 VYGKTKHFIEEMLKDLSKAHK--EWNIISLRYFNPVGAH 177 (600)
Q Consensus 141 ~Y~~sK~~~e~~~~~~~~~~~--~~~~~ilR~~~v~G~~ 177 (600)
.|+.+|.+.+.+++.+++++. |+++.++.||.+-.+.
T Consensus 147 ~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~ 185 (241)
T d2a4ka1 147 HYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM 185 (241)
T ss_dssp HHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGG
T ss_pred ccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHH
Confidence 899999999999999998873 7999999999996653
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.94 E-value=1.2e-09 Score=103.83 Aligned_cols=149 Identities=11% Similarity=0.017 Sum_probs=107.9
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------cccccChHHhhhHHhhhhcccccccCCCCEEE
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------EGDIVSMYANTDLAQKELGWSARCTHDIDCVI 71 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vi 71 (600)
-|||+++.+|+.+++ .+...+.+++..||+ .+|+.+.+.++...++ + .++|++|
T Consensus 10 lITGas~GIG~aia~--~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~------~--~~id~lV 79 (245)
T d2ag5a1 10 ILTAAAQGIGQAAAL--AFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANE------V--ERLDVLF 79 (245)
T ss_dssp EESSTTSHHHHHHHH--HHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHH------C--SCCSEEE
T ss_pred EEeCCCCHHHHHHHH--HHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccc------c--ccceeEE
Confidence 589999999999965 444445566655655 3455555555542221 1 3699999
Q ss_pred EcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHH
Q psy16545 72 HFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYG 143 (600)
Q Consensus 72 h~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~ 143 (600)
|+||...... +.+++...+++|+.++..+++++.. .+..++|++||.... ..+. .....|+
T Consensus 80 n~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~----------~~~~-~~~~~Y~ 148 (245)
T d2ag5a1 80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS----------VKGV-VNRCVYS 148 (245)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT----------TBCC-TTBHHHH
T ss_pred ecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc----------cCCc-cchhHHH
Confidence 9999875422 2345777999999999999988743 345689999986421 0122 4567899
Q ss_pred HHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 144 KTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 144 ~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
.+|.+.+.+++.++.++ .|+++..+.||.|-.|.
T Consensus 149 ~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~ 184 (245)
T d2ag5a1 149 TTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS 184 (245)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechh
Confidence 99999999999999886 38999999999998763
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.92 E-value=7.2e-10 Score=106.38 Aligned_cols=151 Identities=11% Similarity=-0.003 Sum_probs=105.1
Q ss_pred cCCCCcc--hHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGT--SVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g--~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++| -+|+.+++. +...+.+++..+++ .+|++++++++++.++ +.+.
T Consensus 12 lITGas~~~GIG~aiA~~--la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~~~~~ 84 (256)
T d1ulua_ 12 LVMGVTNQRSLGFAIAAK--LKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAG-----VKEAF 84 (256)
T ss_dssp EEESCCCSSSHHHHHHHH--HHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEECCCCCchHHHHHHHH--HHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHH-----HHHhc
Confidence 4789875 489888553 22233333333332 6899999998886655 4333
Q ss_pred CCCCEEEEcCcccCcc--------cCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVG--------ESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~--------~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
.++|++||||+..... ....++...+++|+.++..+++++... .-.++|++||..... +
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~-----------~ 153 (256)
T d1ulua_ 85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK-----------V 153 (256)
T ss_dssp SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS-----------B
T ss_pred CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcC-----------C
Confidence 2599999999975321 122345568999999999999987643 125799999875432 1
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. +....|+.||.+.+.+++.++.++ .|+++..+.||.+..+.
T Consensus 154 ~-~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~ 197 (256)
T d1ulua_ 154 V-PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA 197 (256)
T ss_dssp C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred C-CCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeecc
Confidence 2 456889999999999999999886 38999999999988764
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=98.90 E-value=4.7e-09 Score=102.49 Aligned_cols=195 Identities=15% Similarity=0.104 Sum_probs=127.0
Q ss_pred HHHHhhhCCceeEEEeecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Q psy16545 244 RAIEQFTGKKVDFYSCDLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVF 323 (600)
Q Consensus 244 ~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~ 323 (600)
.....+...+++++.+|+.+...+.+.+. +.+.++|+++.. +..++.+++++++..+++++++
T Consensus 47 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~vi~~~~~~---------------~~~~~~~~~~a~~~~~~~~~~~ 109 (307)
T d1qyca_ 47 QLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVISTVGSL---------------QIESQVNIIKAIKEVGTVKRFF 109 (307)
T ss_dssp HHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEEECCCGG---------------GSGGGHHHHHHHHHHCCCSEEE
T ss_pred HHHHhhccCCcEEEEeecccchhhhhhhh--hceeeeeccccc---------------ccchhhHHHHHHHHhcccccee
Confidence 34555666789999999999999999888 789999998753 2334567889999988889999
Q ss_pred ecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc-cCCCCcchHHHHHHHHHHH
Q psy16545 324 SSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN-LGTGQGTSVLQLLRTFERV 402 (600)
Q Consensus 324 ~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~-~g~~~~~~~~~~~~~~~~~ 402 (600)
.||...+.. +..+..+ ...+.. .......+....+++++++|++. +|++....
T Consensus 110 ~s~~~~~~~-------~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~i~r~~~v~g~~~~~~----------- 163 (307)
T d1qyca_ 110 PSEFGNDVD-------NVHAVEP-AKSVFE-------VKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSL----------- 163 (307)
T ss_dssp CSCCSSCTT-------SCCCCTT-HHHHHH-------HHHHHHHHHHHHTCCBEEEECCEEHHHHTTTT-----------
T ss_pred eeccccccc-------ccccccc-cccccc-------ccccccchhhccCCCceecccceecCCCccch-----------
Confidence 888554322 1111111 122222 33444455567799999999887 43211100
Q ss_pred hCCCCcceEEeeCCCCCcccHHHHHHHHHHHhCCCCCceEEEcCCCCcccHHHHHHHHHHHhCCCCceeeccCCCCCccc
Q psy16545 403 TGNKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPVPYIFYNLGTGQGTS 482 (600)
Q Consensus 403 ~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 482 (600)
.. ..... ..+.+..+ ++.+++.
T Consensus 164 ------------~~-------------------~~~~~----------------------~~~~~~~~----~~~~~~~- 185 (307)
T d1qyca_ 164 ------------AQ-------------------AGLTA----------------------PPRDKVVI----LGDGNAR- 185 (307)
T ss_dssp ------------TC-------------------TTCSS----------------------CCSSEEEE----ETTSCCE-
T ss_pred ------------hh-------------------hhhhh----------------------hhccccee----eeccccc-
Confidence 00 00000 00112221 1233333
Q ss_pred chhhhhhhhhhcCCCccccccCCCCCcchhHHHHHHHhhhhcCCCC-c-eeEeEcCCCCCccHHHHHHHHhhhcCCcccc
Q psy16545 483 VLQLLRTFERVTGKPVPYIFYNLGTGQGTSVLQLLRTFERVTGKPV-P-YIFYNLGTGQGTSVLQLLRTFERVTGKPVPY 560 (600)
Q Consensus 483 ~~~~~~~fi~v~d~~~~~~~~d~~~~~~~~v~d~~~a~~~~~~~~~-~-~~~~nl~~~~~~s~~e~~~~~~~~~g~~~~~ 560 (600)
++|+| ++|+++++..++.++. . +..||+++++.+|+.|+++.+.+++|.+.++
T Consensus 186 -----~~~i~--------------------v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~~ 240 (307)
T d1qyca_ 186 -----VVFVK--------------------EEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEK 240 (307)
T ss_dssp -----EEEEC--------------------HHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEE
T ss_pred -----ccCCc--------------------HHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCcE
Confidence 88888 9999999999987653 3 4467788889999999999999999987666
Q ss_pred cccC
Q psy16545 561 IVEA 564 (600)
Q Consensus 561 ~~~~ 564 (600)
...+
T Consensus 241 ~~~~ 244 (307)
T d1qyca_ 241 AYVP 244 (307)
T ss_dssp EEEC
T ss_pred EECC
Confidence 5543
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.89 E-value=2.9e-09 Score=100.71 Aligned_cols=152 Identities=10% Similarity=-0.024 Sum_probs=104.4
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccccc-----------ccccChHHhhhHHhhhhcccccccCCCCEEEEcCccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARRE-----------GDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVK 77 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~ 77 (600)
|||+++.+|+.+++ .+...+.+++.+|+.. +|..+.+..+.+.+. ....+...++|++|||||..
T Consensus 7 ITGas~GIG~a~a~--~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~iD~lInnAG~~ 82 (236)
T d1dhra_ 7 VYGGRGALGSRCVQ--AFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAE--VGKLLGDQKVDAILCVAGGW 82 (236)
T ss_dssp EETTTSHHHHHHHH--HHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHH--HHHHHTTCCEEEEEECCCCC
T ss_pred EECCCCHHHHHHHH--HHHHCCCEEEEEeCCccccccccceeecccCcHHHHHHHHHH--HHHHhCCCCceEEEECCccc
Confidence 79999999999976 4445566666555542 333333333322211 00022223699999999964
Q ss_pred CcccC-----CCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q psy16545 78 AVGES-----MQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIE 150 (600)
Q Consensus 78 ~~~~~-----~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e 150 (600)
..... .+++...+++|+.++.++.+++.+. .-.++|++||..... +. +....|+.||.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~-----------~~-~~~~~Y~asKaal~ 150 (236)
T d1dhra_ 83 AGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD-----------GT-PGMIGYGMAKGAVH 150 (236)
T ss_dssp CCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CC-TTBHHHHHHHHHHH
T ss_pred ccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcC-----------Cc-cCCcccHHHHHHHH
Confidence 32211 2345568999999999999998663 235899999976442 12 34678999999999
Q ss_pred HHHHHHHhhc----CCceEEEEecccccCC
Q psy16545 151 EMLKDLSKAH----KEWNIISLRYFNPVGA 176 (600)
Q Consensus 151 ~~~~~~~~~~----~~~~~~ilR~~~v~G~ 176 (600)
.+++.++.+. .+++++.+.||.+..|
T Consensus 151 ~lt~~la~El~~~~~gI~vn~v~PG~v~T~ 180 (236)
T d1dhra_ 151 QLCQSLAGKNSGMPSGAAAIAVLPVTLDTP 180 (236)
T ss_dssp HHHHHHTSTTSSCCTTCEEEEEEESCEECH
T ss_pred HHHHHHHHHhccCCCcEEEEEEEeccCcCC
Confidence 9999999775 2799999999999876
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.89 E-value=3e-09 Score=100.58 Aligned_cols=152 Identities=12% Similarity=0.071 Sum_probs=104.2
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccccc-----------ccccChHHhhhHHhhhhcccccccCCCCEEEEcCccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARRE-----------GDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVK 77 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~ 77 (600)
|||+++.+|+.+++ ++...+.+++.+||++ +|..+.+......+. ....++..++|++|||||..
T Consensus 7 ITGas~GIG~aia~--~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~iD~linnAG~~ 82 (235)
T d1ooea_ 7 VYGGKGALGSAILE--FFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQ--TASSLQGSQVDGVFCVAGGW 82 (235)
T ss_dssp EETTTSHHHHHHHH--HHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHH--HHHHHTTCCEEEEEECCCCC
T ss_pred EECCCCHHHHHHHH--HHHHCCCEEEEEECCchhcccccceeccccCchhHHHHHHHH--HHHHhcCCCeeEEEECCccc
Confidence 79999999999966 4445677788777764 333333322221111 00022224699999999974
Q ss_pred CcccC-C----CChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q psy16545 78 AVGES-M----QEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIE 150 (600)
Q Consensus 78 ~~~~~-~----~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e 150 (600)
..... . +.++..+++|+.++..+.+++... .-.++|++||..... +. +...+|+.||.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~-----------~~-~~~~~Y~asKaal~ 150 (235)
T d1ooea_ 83 AGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG-----------PT-PSMIGYGMAKAAVH 150 (235)
T ss_dssp CCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CC-TTBHHHHHHHHHHH
T ss_pred ccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcC-----------Cc-ccccchHHHHHHHH
Confidence 33221 1 234557999999999999988664 225899999975443 22 45689999999999
Q ss_pred HHHHHHHhhc----CCceEEEEecccccCC
Q psy16545 151 EMLKDLSKAH----KEWNIISLRYFNPVGA 176 (600)
Q Consensus 151 ~~~~~~~~~~----~~~~~~ilR~~~v~G~ 176 (600)
.+++.++.++ .+++++.+.||.+-.+
T Consensus 151 ~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~ 180 (235)
T d1ooea_ 151 HLTSSLAAKDSGLPDNSAVLTIMPVTLDTP 180 (235)
T ss_dssp HHHHHHHSTTSSCCTTCEEEEEEESCBCCH
T ss_pred HHHHHHHHHhccCCCceEEEEEecCcCcCc
Confidence 9999998775 2778999999988655
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.86 E-value=7.5e-09 Score=100.20 Aligned_cols=158 Identities=13% Similarity=-0.005 Sum_probs=108.0
Q ss_pred CCCCcchHHHHHHHh-hhcc------------------------CCCccEEecccccccccChHHhhhHHhhhhcccccc
Q psy16545 9 GTGQGTSVLQLLRTF-ERVT------------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 9 vtG~~g~~~~~l~~~-~~~~------------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
|||+++-+|..+++. .+.. +.++.++ .+|++|.+++++++++ +.+
T Consensus 8 VTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~-----~~Dvs~~~sv~~~~~~-----~~~ 77 (275)
T d1wmaa1 8 VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFH-----QLDIDDLQSIRALRDF-----LRK 77 (275)
T ss_dssp ESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEE-----ECCTTCHHHHHHHHHH-----HHH
T ss_pred ECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEE-----EEecCCHHHHHHHHHH-----HHH
Confidence 789999999888542 1111 1234555 7899999999987776 544
Q ss_pred cC-CCCEEEEcCcccCcccCC----CChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCcccc-CCCCCCC-------
Q psy16545 64 TH-DIDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVY-GEPQFLP------- 128 (600)
Q Consensus 64 ~~-~~d~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vy-g~~~~~~------- 128 (600)
+. ++|++|||||........ .++...+++|+.|+.++++++... .-.++|++||.... +.....+
T Consensus 78 ~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~ 157 (275)
T d1wmaa1 78 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFR 157 (275)
T ss_dssp HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred hcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhc
Confidence 33 699999999987543322 245568999999999999998653 12589999996432 1000000
Q ss_pred ----------------------CCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc------CCceEEEEecccccCCC
Q psy16545 129 ----------------------ITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH------KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 129 ----------------------~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~------~~~~~~ilR~~~v~G~~ 177 (600)
-....+. .+.+.|+.||.+...+++.++++. .++.+..+.||.|-.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m 233 (275)
T d1wmaa1 158 SETITEEELVGLMNKFVEDTKKGVHQKEG-WPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 233 (275)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHTTCTTTTT-CCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred ccccchhhhccccccchhcccccccccCC-CchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCc
Confidence 0001122 456789999999998887766543 38999999999997764
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.85 E-value=3.9e-09 Score=101.30 Aligned_cols=146 Identities=14% Similarity=0.070 Sum_probs=105.5
Q ss_pred CCCCcchHHHHHHHhhhcc-------------------------CCCccEEecccccccccChHHhhhHHhhhhcccccc
Q psy16545 9 GTGQGTSVLQLLRTFERVT-------------------------GKPVPYIVEARREGDIVSMYANTDLAQKELGWSARC 63 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~-------------------------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 63 (600)
|||+++.+|.++++..... +.++.++ .+|++|.+++++.+++ +.+
T Consensus 11 ITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~D~~~~~~v~~~~~~-----~~~ 80 (259)
T d1ja9a_ 11 TTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAI-----QADISKPSEVVALFDK-----AVS 80 (259)
T ss_dssp ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-----ECCTTSHHHHHHHHHH-----HHH
T ss_pred EeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEe-----cCCCCCHHHHHHHHHH-----HHH
Confidence 7899999998885422111 1234555 7899999998886665 444
Q ss_pred cC-CCCEEEEcCcccCccc----CCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCc-cccCCCCCCCCCCCCCC
Q psy16545 64 TH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSC-TVYGEPQFLPITEDHPT 135 (600)
Q Consensus 64 ~~-~~d~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~-~vyg~~~~~~~~E~~~~ 135 (600)
+. ++|++||+||...... ..+++...+++|+.++.++++++.+. .-++++.++|. +... +.
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~-----------~~ 149 (259)
T d1ja9a_ 81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT-----------GI 149 (259)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC-----------SC
T ss_pred HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccccc-----------CC
Confidence 33 5999999999864322 23456679999999999999998664 12356666654 3221 11
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
+....|+.||.+.+.+++.++.++ .|+++..+.||.+-.+
T Consensus 150 -~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~ 191 (259)
T d1ja9a_ 150 -PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTD 191 (259)
T ss_dssp -CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred -CCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccCh
Confidence 345789999999999999999876 3899999999998755
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.75 E-value=1.6e-08 Score=97.54 Aligned_cols=150 Identities=13% Similarity=0.053 Sum_probs=105.7
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||+++.+|+++++ ++...+.+++..+|+ .+|+.+.+......+. +...
T Consensus 18 lITGassGIG~aiA~--~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~~~ 90 (269)
T d1xu9a_ 18 IVTGASKGIGREMAY--HLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQ-----AGKLM 90 (269)
T ss_dssp EESSCSSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHH-----HHHHH
T ss_pred EEeCCCcHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHH-----HHHHh
Confidence 489999999999966 444455666666664 3566666655553332 2221
Q ss_pred CCCCEEEEcCcccCcccC----CCChhhhHHhHHHHHHHHHHHHHHc---CCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMKSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~a~~~~---~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
..+|+++|+||....... .++....+++|+.++..+.+++... +-.++|++||...+- +. +
T Consensus 91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~-----------~~-p 158 (269)
T d1xu9a_ 91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV-----------AY-P 158 (269)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS-----------CC-T
T ss_pred CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcC-----------CC-C
Confidence 258999999998644322 2345568999999999998886431 235899999976432 22 4
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc----CCceEEEEecccccCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH----KEWNIISLRYFNPVGA 176 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~~ilR~~~v~G~ 176 (600)
..+.|+.||.+.+.+++.++.++ .+++++.+.||.|-.+
T Consensus 159 ~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~ 201 (269)
T d1xu9a_ 159 MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE 201 (269)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc
Confidence 56899999999999999998764 2689999999988655
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=98.72 E-value=2.8e-08 Score=96.49 Aligned_cols=146 Identities=10% Similarity=0.073 Sum_probs=99.6
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc----------------------------------------cccccChHH
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------------------------EGDIVSMYA 48 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------------------------~~Dl~~~~~ 48 (600)
|||+++.+|+.+++ ++...+.+++..+++ .+|+++.++
T Consensus 7 ITGas~GIG~aiA~--~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~~ 84 (284)
T d1e7wa_ 7 VTGAAKRLGRSIAE--GLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTR 84 (284)
T ss_dssp ETTCSSHHHHHHHH--HHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHH
T ss_pred EeCCCCHHHHHHHH--HHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHHH
Confidence 79999999999865 333344444433322 346777777
Q ss_pred hhhHHhhhhcccccccC-CCCEEEEcCcccCcccCCC----C--------------hhhhHHhHHHHHHHHHHHHHHc--
Q psy16545 49 NTDLAQKELGWSARCTH-DIDCVIHFAAVKAVGESMQ----E--------------PLMYYKNNLIATINLLEVMKSH-- 107 (600)
Q Consensus 49 ~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~~~~~~~~----~--------------~~~~~~~Nv~gt~~ll~a~~~~-- 107 (600)
+++++++ +.+.. ++|++|||||......... + ...++.+|+.++..+.+++.+.
T Consensus 85 v~~~~~~-----~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 159 (284)
T d1e7wa_ 85 CAELVAA-----CYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 159 (284)
T ss_dssp HHHHHHH-----HHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-----HHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhh
Confidence 7775554 44432 6999999999864422111 1 1236789999999999886432
Q ss_pred --------CCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccc
Q psy16545 108 --------GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNP 173 (600)
Q Consensus 108 --------~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v 173 (600)
+..++|+++|..... +. .....|+.||.+.+.+++.++.++ .|+++..+.||.+
T Consensus 160 ~~~~~~~~~~~~ii~~~s~~~~~-----------~~-~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t 223 (284)
T d1e7wa_ 160 GTPAKHRGTNYSIINMVDAMTNQ-----------PL-LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS 223 (284)
T ss_dssp TSCGGGSCSCEEEEEECCTTTTS-----------CC-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred hhHHHhcCCCCcccccccccccC-----------Cc-cceeeeccccccchhhhHHHHHHhCCccccccccccccc
Confidence 224677777764322 22 456789999999999999999876 3899999999863
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=98.71 E-value=2.7e-08 Score=97.14 Aligned_cols=152 Identities=12% Similarity=-0.018 Sum_probs=105.0
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc----------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR----------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~----------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||+++.+|+.+++ .+...+.+++..||+ .+|+++.+++.++.++ +...
T Consensus 29 lITGas~GIG~aiA~--~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~-----~~~~~ 101 (294)
T d1w6ua_ 29 FITGGGTGLGKGMTT--LLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSE-----LIKVA 101 (294)
T ss_dssp EEETTTSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH-----HHHHT
T ss_pred EEeCCCCHHHHHHHH--HHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhh-----hhhhc
Confidence 489999999999955 333334445544544 5899999988875554 3333
Q ss_pred CCCCEEEEcCcccCcccCC----CChhhhHHhHHHHHHHHHHHHH----H-cCCCeEEEecCccccCCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEVMK----S-HGVYQLVFSSSCTVYGEPQFLPITEDHPT 135 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~a~~----~-~~~~r~I~~SS~~vyg~~~~~~~~E~~~~ 135 (600)
.++|++||+||........ .+....+.+|..+...+...+. . .....++.+||...... .
T Consensus 102 g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~-----------~ 170 (294)
T d1w6ua_ 102 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG-----------S 170 (294)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC-----------C
T ss_pred cccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc-----------c
Confidence 3699999999987543222 3455678888888888766642 2 23346677777543221 1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCCC
Q psy16545 136 GNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAHP 178 (600)
Q Consensus 136 ~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~ 178 (600)
....+|+.||.+.+.+++.++.++ .|+++..+.||.|-.+..
T Consensus 171 -~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~ 214 (294)
T d1w6ua_ 171 -GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGA 214 (294)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred -cccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchh
Confidence 345789999999999999999876 389999999999988753
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.68 E-value=6.5e-08 Score=89.44 Aligned_cols=104 Identities=12% Similarity=0.019 Sum_probs=75.7
Q ss_pred ecCChhhHHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccCCCCCCCC
Q psy16545 260 DLVDKNRLGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPIT 339 (600)
Q Consensus 260 Dl~~~~~l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~vYg~~~~~~~~ 339 (600)
+..+..++...+. ..+|+|||+++... ........+.+.|+.++.+++++|++.++++|+++||..+|+.
T Consensus 48 ~~~d~~~~~~~~~-~~~d~vi~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~------- 117 (212)
T d2a35a1 48 PVGPLAELLPQLD-GSIDTAFCCLGTTI--KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK------- 117 (212)
T ss_dssp CBSCHHHHGGGCC-SCCSEEEECCCCCH--HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------
T ss_pred cccchhhhhhccc-cchheeeeeeeeec--cccccccccccchhhhhhhcccccccccccccccccccccccc-------
Confidence 3344443333332 25899999987642 2334567889999999999999999999999999999888753
Q ss_pred CCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCC-CCeeEeecc-cCCC
Q psy16545 340 EDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGN-KPVPYIFYN-LGTG 387 (600)
Q Consensus 340 E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~-~~~~~r~~~-~g~~ 387 (600)
+ .+.|+.+| ..+|+.++ ..+. +++++||+. +|++
T Consensus 118 ------~-~~~y~~~K---~~~E~~l~----~~~~~~~~I~Rp~~v~G~~ 153 (212)
T d2a35a1 118 ------S-SIFYNRVK---GELEQALQ----EQGWPQLTIARPSLLFGPR 153 (212)
T ss_dssp ------C-SSHHHHHH---HHHHHHHT----TSCCSEEEEEECCSEESTT
T ss_pred ------c-ccchhHHH---HHHhhhcc----ccccccceeeCCcceeCCc
Confidence 1 37899999 66787765 3355 489999887 5443
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.61 E-value=5.9e-08 Score=92.20 Aligned_cols=150 Identities=12% Similarity=0.102 Sum_probs=106.6
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccccc------------------ccccChHHhhhHHhhhhcccccc-cCCCCE
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARRE------------------GDIVSMYANTDLAQKELGWSARC-THDIDC 69 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~------------------~Dl~~~~~~~~~~~~~~~~~~~~-~~~~d~ 69 (600)
|||+++.+|..+++ ++...++.++..||+. +|+.+.+.+++..++ +.. ....|.
T Consensus 10 ITGas~GIG~aia~--~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 82 (248)
T d2o23a1 10 ITGGASGLGLATAE--RLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALAL-----AKGKFGRVDV 82 (248)
T ss_dssp EETTTSHHHHHHHH--HHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHH-----HHHHHSCCCE
T ss_pred EeCCCCHHHHHHHH--HHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccc-----cccccccccc
Confidence 79999999999965 5555666777666653 455555554443222 211 135899
Q ss_pred EEEcCcccCcccC----------CCChhhhHHhHHHHHHHHHHHHHHc----------CCCeEEEecCccccCCCCCCCC
Q psy16545 70 VIHFAAVKAVGES----------MQEPLMYYKNNLIATINLLEVMKSH----------GVYQLVFSSSCTVYGEPQFLPI 129 (600)
Q Consensus 70 Vih~A~~~~~~~~----------~~~~~~~~~~Nv~gt~~ll~a~~~~----------~~~r~I~~SS~~vyg~~~~~~~ 129 (600)
++++++....... .+++...+++|+.++.++.+++... +-.++|++||...+-
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~------- 155 (248)
T d2o23a1 83 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE------- 155 (248)
T ss_dssp EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-------
T ss_pred cccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc-------
Confidence 9998876543221 1345678999999999999998542 224799999986542
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 130 TEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 130 ~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+. +..+.|+.||.+.+.+++.++.++ .|++++.+.||.+..+.
T Consensus 156 ----~~-~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~ 200 (248)
T d2o23a1 156 ----GQ-VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 200 (248)
T ss_dssp ----CC-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-
T ss_pred ----CC-CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecch
Confidence 12 456889999999999999999886 38999999999987664
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.48 E-value=8.5e-08 Score=95.08 Aligned_cols=100 Identities=11% Similarity=-0.017 Sum_probs=76.1
Q ss_pred CCCEEEEcCcccCc------ccCCCChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAV------GESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|++||+||.... ....+++...+++|+.++..+++++.+. .-.++|.+||.+.... .+ .
T Consensus 113 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsIv~iss~~~~~~----------~p-~ 181 (329)
T d1uh5a_ 113 KINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKV----------VP-G 181 (329)
T ss_dssp CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC----------CT-T
T ss_pred CCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccccccccceeehhccc----------cc-c
Confidence 69999999996532 1123456779999999999999998764 2257999988754322 11 2
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc-C--CceEEEEecccccCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH-K--EWNIISLRYFNPVGA 176 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~-~--~~~~~ilR~~~v~G~ 176 (600)
+.+.|+.||.+.+.+++.++.+. + |++++.|.||.|--+
T Consensus 182 y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~ 223 (329)
T d1uh5a_ 182 YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCT
T ss_pred cchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccch
Confidence 35789999999999999998775 2 899999999988664
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=98.41 E-value=2.9e-07 Score=86.72 Aligned_cols=149 Identities=13% Similarity=0.067 Sum_probs=102.6
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEecccc---------cccccChHHhhhHHhhhhcccccccCCCCEEEEcCcccCc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARR---------EGDIVSMYANTDLAQKELGWSARCTHDIDCVIHFAAVKAV 79 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~---------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~ 79 (600)
|||+++.+|+.+++. +...+.+++..||+ ++|+.+.........+ .......+.++++++....
T Consensus 6 ITGas~GIG~aiA~~--la~~Ga~V~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 78 (241)
T d1uaya_ 6 VTGGASGLGRAAALA--LKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVAR-----AQEEAPLFAVVSAAGVGLA 78 (241)
T ss_dssp EETTTSHHHHHHHHH--HHHHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHH-----HHHHSCEEEEEECCCCCCC
T ss_pred EeCCCCHHHHHHHHH--HHHCCCEEEEEECCcccccceEeeccccchhhhHHHHHh-----hhccccccchhhhhhcccc
Confidence 799999999999663 33444555555654 4677777665553333 2223355666666655322
Q ss_pred cc--------CCCChhhhHHhHHHHHHHHHHHHHHc----------CCCeEEEecCccccCCCCCCCCCCCCCCCCCCCh
Q psy16545 80 GE--------SMQEPLMYYKNNLIATINLLEVMKSH----------GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNV 141 (600)
Q Consensus 80 ~~--------~~~~~~~~~~~Nv~gt~~ll~a~~~~----------~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~ 141 (600)
.. ....+...+++|+.+...+++.+... +-.++|++||...+-. . .....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~-----------~-~~~~~ 146 (241)
T d1uaya_ 79 EKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG-----------Q-IGQAA 146 (241)
T ss_dssp CCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC-----------C-TTCHH
T ss_pred ccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC-----------C-CCchh
Confidence 11 11234568899999999988876432 2358999999765321 1 45689
Q ss_pred HHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 142 YGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
|+.||.+.+.+++.++.++ .|++++.+.||.+-.+
T Consensus 147 Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~ 183 (241)
T d1uaya_ 147 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTP 183 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCCceeeecCCccccc
Confidence 9999999999999999876 3899999999999766
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=98.37 E-value=1.2e-06 Score=83.30 Aligned_cols=151 Identities=11% Similarity=-0.009 Sum_probs=99.7
Q ss_pred cCCCCcc--hHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGT--SVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g--~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||+++ -+|..+++. +...+.+++..+|+ ..|+.+..+..+..++ ....
T Consensus 9 lITGass~~GIG~aiA~~--l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 81 (258)
T d1qsga_ 9 LVTGVASKLSIAYGIAQA--MHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAE-----LGKVW 81 (258)
T ss_dssp EECCCCSTTSHHHHHHHH--HHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHH-----HHTTC
T ss_pred EEECCCCchhHHHHHHHH--HHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHH-----hhhcc
Confidence 4788876 477777553 23334444433433 3466666655554333 2222
Q ss_pred CCCCEEEEcCcccCcccCC---------CChhhhHHhHHHHHHHHHHHHHHc--CCCeEEEecCccccCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGESM---------QEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDH 133 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~---------~~~~~~~~~Nv~gt~~ll~a~~~~--~~~r~I~~SS~~vyg~~~~~~~~E~~ 133 (600)
..+|++||+|+........ +.....+.+|+.+...+.+++... .-+.+|++||.....
T Consensus 82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~----------- 150 (258)
T d1qsga_ 82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER----------- 150 (258)
T ss_dssp SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------
T ss_pred cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhcc-----------
Confidence 2589999999886432211 123446678888888888887653 224688888864321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 134 PTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 134 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+. +..+.|+.||.+.+.+++.++.++ .+++++.++||.|..+.
T Consensus 151 ~~-~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~ 195 (258)
T d1qsga_ 151 AI-PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA 195 (258)
T ss_dssp BC-TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred CC-CCcHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccc
Confidence 12 345789999999999999999887 37999999999998775
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=98.32 E-value=4.6e-06 Score=82.86 Aligned_cols=103 Identities=13% Similarity=-0.001 Sum_probs=68.8
Q ss_pred CCceeEEEeecCChhh-HHHHhhcCCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCccc
Q psy16545 251 GKKVDFYSCDLVDKNR-LGEIFAKHDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTV 329 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~-l~~~l~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v~~SS~~v 329 (600)
..+++++.+|+.+..+ +..++. ..+.+++...... ..++..+.+++++|++.|++++++.||...
T Consensus 48 ~~~v~~~~gD~~d~~~~~~~a~~--~~~~~~~~~~~~~------------~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~ 113 (350)
T d1xgka_ 48 IPNVTLFQGPLLNNVPLMDTLFE--GAHLAFINTTSQA------------GDEIAIGKDLADAAKRAGTIQHYIYSSMPD 113 (350)
T ss_dssp STTEEEEESCCTTCHHHHHHHHT--TCSEEEECCCSTT------------SCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred cCCCEEEEeeCCCcHHHHHHHhc--CCceEEeeccccc------------chhhhhhhHHHHHHHHhCCCceEEEeeccc
Confidence 3579999999998654 566666 6788776643211 135667889999999999988888888654
Q ss_pred ccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeeccc
Q psy16545 330 YGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYNL 384 (600)
Q Consensus 330 Yg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~~ 384 (600)
+..... .+ ..+|..+| ...|. +....+++++++|+..+
T Consensus 114 ~~~~~~---------~~-~~~~~~~k---~~~~~----~~~~~~~~~~~vr~~~~ 151 (350)
T d1xgka_ 114 HSLYGP---------WP-AVPMWAPK---FTVEN----YVRQLGLPSTFVYAGIY 151 (350)
T ss_dssp GGGTSS---------CC-CCTTTHHH---HHHHH----HHHTSSSCEEEEEECEE
T ss_pred cccCCc---------cc-chhhhhhH---HHHHH----HHHhhccCceeeeecee
Confidence 432111 11 24455566 43444 44456889999998654
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.28 E-value=2.8e-06 Score=80.95 Aligned_cols=150 Identities=13% Similarity=0.093 Sum_probs=93.6
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccccc-----------------------ccccC----hHHhhhHHhhhhcccc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARRE-----------------------GDIVS----MYANTDLAQKELGWSA 61 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~-----------------------~Dl~~----~~~~~~~~~~~~~~~~ 61 (600)
|||+++-+|...++ ++...+.+++..+|+. .|+.+ .+.+.++.++ +
T Consensus 6 VTGas~GIG~aia~--~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 78 (266)
T d1mxha_ 6 ITGGARRIGHSIAV--RLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC-----S 78 (266)
T ss_dssp ETTCSSHHHHHHHH--HHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH-----H
T ss_pred EeCCCCHHHHHHHH--HHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHH-----H
Confidence 79999999999865 4445566666555542 12221 2233332222 2
Q ss_pred ccc-CCCCEEEEcCcccCcccCC---------------CChhhhHHhHHHHHHHHHHHHHHc---------CCCeEEEec
Q psy16545 62 RCT-HDIDCVIHFAAVKAVGESM---------------QEPLMYYKNNLIATINLLEVMKSH---------GVYQLVFSS 116 (600)
Q Consensus 62 ~~~-~~~d~Vih~A~~~~~~~~~---------------~~~~~~~~~Nv~gt~~ll~a~~~~---------~~~r~I~~S 116 (600)
.+. .++|++|||||...+.... ......+..|+.+.......+... ....++.+|
T Consensus 79 ~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (266)
T d1mxha_ 79 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC 158 (266)
T ss_dssp HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred HHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhh
Confidence 222 2699999999986532211 112235556666666666555432 123556666
Q ss_pred CccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 117 SCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 117 S~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
+..... +. +....|+.||.+.+.+++.++.++ .|+++..+.||.+..+.
T Consensus 159 ~~~~~~-----------~~-~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~ 209 (266)
T d1mxha_ 159 DAMTDL-----------PL-PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPP 209 (266)
T ss_dssp CGGGGS-----------CC-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCS
T ss_pred hccccc-----------cC-cchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccc
Confidence 654332 22 456889999999999999998876 28999999999987663
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=98.13 E-value=7.2e-06 Score=78.48 Aligned_cols=151 Identities=14% Similarity=0.033 Sum_probs=93.5
Q ss_pred cCCCCcc--hHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhccccccc-
Q psy16545 8 LGTGQGT--SVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCT- 64 (600)
Q Consensus 8 ~vtG~~g--~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~- 64 (600)
-|||++| .+|.++++ ++...+.+++..+|+ .+|+++.+++.++.++ +.+.
T Consensus 9 lITGaag~~GIG~AiA~--~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~~~ 81 (274)
T d2pd4a1 9 LIVGVANNKSIAYGIAQ--SCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNS-----VKKDL 81 (274)
T ss_dssp EEECCCSTTSHHHHHHH--HHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHH-----HHHHT
T ss_pred EEECCCCCcHHHHHHHH--HHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHH-----HHHHc
Confidence 3788765 49998865 444555666655654 3688888887775554 3332
Q ss_pred CCCCEEEEcCcccCcccCC-----CChhhhHHhHHH---HHHHHHHHHHHc-CC-CeEEEecCccccCCCCCCCCCCCCC
Q psy16545 65 HDIDCVIHFAAVKAVGESM-----QEPLMYYKNNLI---ATINLLEVMKSH-GV-YQLVFSSSCTVYGEPQFLPITEDHP 134 (600)
Q Consensus 65 ~~~d~Vih~A~~~~~~~~~-----~~~~~~~~~Nv~---gt~~ll~a~~~~-~~-~r~I~~SS~~vyg~~~~~~~~E~~~ 134 (600)
..+|++||++|........ ........++.. +...+.....+. +. ..++.+|+.+..+.
T Consensus 82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~----------- 150 (274)
T d2pd4a1 82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY----------- 150 (274)
T ss_dssp SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------
T ss_pred CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccc-----------
Confidence 2699999999986432211 122222222222 222333333222 22 24555555544332
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 135 TGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 135 ~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
. .....|+.||.+.+.+++.++.++ .|+++..+.||.+..+.
T Consensus 151 ~-~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~ 194 (274)
T d2pd4a1 151 M-AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLA 194 (274)
T ss_dssp C-TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred c-ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCcc
Confidence 2 345789999999999999988876 37999999999988774
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=98.12 E-value=2.6e-06 Score=84.76 Aligned_cols=128 Identities=12% Similarity=-0.040 Sum_probs=86.7
Q ss_pred cCCCCcchHHHHHHHhhhccC---------------------CCccEEecccccccccChHHhhhHHhhhhcccccccCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTG---------------------KPVPYIVEARREGDIVSMYANTDLAQKELGWSARCTHD 66 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~---------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~~ 66 (600)
.|||+||++|.++.+.....+ .+++++ .+|+.|..++.+. ++. +
T Consensus 7 lVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~-----~gD~~d~~~~~~~--------a~~--~ 71 (350)
T d1xgka_ 7 AVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLF-----QGPLLNNVPLMDT--------LFE--G 71 (350)
T ss_dssp EEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEE-----ESCCTTCHHHHHH--------HHT--T
T ss_pred EEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEE-----EeeCCCcHHHHHH--------Hhc--C
Confidence 389999999999965332111 133444 6788886553331 444 7
Q ss_pred CCEEEEcCcccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHH
Q psy16545 67 IDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTK 146 (600)
Q Consensus 67 ~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK 146 (600)
+|+++++.... ...|+..+.+++++|++.+++++++.||...... ... .+..+|..+|
T Consensus 72 ~~~~~~~~~~~------------~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~---------~~~-~~~~~~~~~k 129 (350)
T d1xgka_ 72 AHLAFINTTSQ------------AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSL---------YGP-WPAVPMWAPK 129 (350)
T ss_dssp CSEEEECCCST------------TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGG---------TSS-CCCCTTTHHH
T ss_pred CceEEeecccc------------cchhhhhhhHHHHHHHHhCCCceEEEeecccccc---------CCc-ccchhhhhhH
Confidence 78888764321 1246677899999999999888999988653321 122 4556778889
Q ss_pred HHHHHHHHHHHhhcCCceEEEEecccccCCC
Q psy16545 147 HFIEEMLKDLSKAHKEWNIISLRYFNPVGAH 177 (600)
Q Consensus 147 ~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~ 177 (600)
...+.++++. +++.+++|++..++..
T Consensus 130 ~~~~~~~~~~-----~~~~~~vr~~~~~~~~ 155 (350)
T d1xgka_ 130 FTVENYVRQL-----GLPSTFVYAGIYNNNF 155 (350)
T ss_dssp HHHHHHHHTS-----SSCEEEEEECEEGGGC
T ss_pred HHHHHHHHhh-----ccCceeeeeceeeccc
Confidence 8888766542 7889999999888753
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.10 E-value=4.4e-06 Score=81.00 Aligned_cols=101 Identities=11% Similarity=-0.062 Sum_probs=72.7
Q ss_pred CCCEEEEcCcccCc------ccCCCChhhhHHhHHHHHHHHHHHHHHcCC--CeEEEecCccccCCCCCCCCCCCCCCCC
Q psy16545 66 DIDCVIHFAAVKAV------GESMQEPLMYYKNNLIATINLLEVMKSHGV--YQLVFSSSCTVYGEPQFLPITEDHPTGN 137 (600)
Q Consensus 66 ~~d~Vih~A~~~~~------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--~r~I~~SS~~vyg~~~~~~~~E~~~~~~ 137 (600)
++|++|||||.... ....+++...+++|+.++..+++++..... ++.+.+++.+.... .. .
T Consensus 119 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----------~~-~ 187 (297)
T d1d7oa_ 119 SIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI----------IP-G 187 (297)
T ss_dssp CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC----------CT-T
T ss_pred CCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcCCcceeeeehhhccc----------cc-c
Confidence 69999999997421 112345677999999999999999876421 24555555443221 11 3
Q ss_pred CCChHHHHHHHHHHHHHHHHhhc---CCceEEEEecccccCCC
Q psy16545 138 IKNVYGKTKHFIEEMLKDLSKAH---KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 138 p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~~ 177 (600)
....|+.+|.+.+.+++.++.++ .+++++.+.||.+..+.
T Consensus 188 ~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~ 230 (297)
T d1d7oa_ 188 YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRA 230 (297)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCC
T ss_pred cccceecccccccccccccchhccccceEEecccccccccchh
Confidence 45789999999999888776654 28999999999998875
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=98.07 E-value=9.7e-06 Score=77.20 Aligned_cols=123 Identities=9% Similarity=-0.084 Sum_probs=77.6
Q ss_pred cccccChHHhhhHHhhhhccccccc-CCCCEEEEcCcccCccc---------CCCChhhhHHhHHHHHHHHHHHHHHcC-
Q psy16545 40 EGDIVSMYANTDLAQKELGWSARCT-HDIDCVIHFAAVKAVGE---------SMQEPLMYYKNNLIATINLLEVMKSHG- 108 (600)
Q Consensus 40 ~~Dl~~~~~~~~~~~~~~~~~~~~~-~~~d~Vih~A~~~~~~~---------~~~~~~~~~~~Nv~gt~~ll~a~~~~~- 108 (600)
++|+++.+++.++.+.-. +.+.. ..+|+++|+||...... ........+.+|+.....+.+++....
T Consensus 61 ~~dv~~~~~~~~~~~~v~--~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (268)
T d2h7ma1 61 ELDVQNEEHLASLAGRVT--EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN 138 (268)
T ss_dssp ECCTTCHHHHHHHHHHHH--HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred eeecccccccccccchhh--hccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc
Confidence 789999877666444300 01221 25899999999753211 112233356666666666666665432
Q ss_pred CCeEEEecCccccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCC
Q psy16545 109 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNVYGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGA 176 (600)
Q Consensus 109 ~~r~I~~SS~~vyg~~~~~~~~E~~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 176 (600)
....+.++|..... +. +....|+.+|.+.+.+++.++.++ .++++..+.||.+-.+
T Consensus 139 ~~~~i~~~s~~~~~-----------~~-p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~ 196 (268)
T d2h7ma1 139 PGGSIVGMDFDPSR-----------AM-PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL 196 (268)
T ss_dssp EEEEEEEEECCCSS-----------CC-TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred cccccccccccccc-----------cC-cccchhhccccchhhccccchhhhhccCCcceEEecCCCCCh
Confidence 12344444432221 12 345789999999999999999876 3799999999988765
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.00 E-value=1.7e-05 Score=74.36 Aligned_cols=126 Identities=12% Similarity=0.072 Sum_probs=89.0
Q ss_pred HHHHHhhhCCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcccc----ccChHHHHHHHHHHHHHHHHHH
Q psy16545 243 IRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVM 313 (600)
Q Consensus 243 l~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~~ 313 (600)
++.+.+..+.....+.+|+++++++.++++.. ++|++||.|+......- .++....+++|+.++..+.+++
T Consensus 41 l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~ 120 (243)
T d1q7ba_ 41 AQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAV 120 (243)
T ss_dssp HHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHH
Confidence 34444444667888999999999888877652 69999999987654332 2345567899999998888877
Q ss_pred HH----cCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 314 KS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 314 ~~----~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.. .+-.++|++||.+.+-.. |....|+.|| ...+.+.+.++.+ +|+++..+.|+.
T Consensus 121 ~~~m~~~~~G~II~isS~~~~~~~------------~~~~~Y~asK---aal~~lt~~lA~ela~~gIrVN~I~PG~ 182 (243)
T d1q7ba_ 121 MRAMMKKRHGRIITIGSVVGTMGN------------GGQANYAAAK---AGLIGFSKSLAREVASRGITVNVVAPGF 182 (243)
T ss_dssp HHHHHHHTCEEEEEECCHHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred HHHHHHcCCCEeeeecchhhcCCC------------CCCHHHHHHH---HHHHHHHHHHHHHhCccCeEEEEEecce
Confidence 53 345699999997654221 2237899999 5577788777765 466666666554
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.91 E-value=2.8e-05 Score=73.34 Aligned_cols=158 Identities=10% Similarity=0.014 Sum_probs=97.6
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccccc----ccccChHHhhhHHhhhhccccccc--CCCCEEEEcCcccCcccC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARRE----GDIVSMYANTDLAQKELGWSARCT--HDIDCVIHFAAVKAVGES 82 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~----~Dl~~~~~~~~~~~~~~~~~~~~~--~~~d~Vih~A~~~~~~~~ 82 (600)
|||+++.+|+++++ ++...+.+++..|++. .|+.+.+.......+ ...+ ..+|+++|+|+....
T Consensus 6 ITGas~GIG~aiA~--~la~~Ga~V~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~~~~~~id~lv~~Ag~~~~--- 75 (257)
T d1fjha_ 6 ISGCATGIGAATRK--VLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIAD-----VLAKCSKGMDGLVLCAGLGPQ--- 75 (257)
T ss_dssp EETTTSHHHHHHHH--HHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHH-----HHTTCTTCCSEEEECCCCCTT---
T ss_pred EeCCCCHHHHHHHH--HHHHCCCEEEEEECChHHHHHHhcCHHHHHHHHHH-----HHHHhCCCCcEEEEcCCCCCc---
Confidence 79999999999966 4455677888778775 466666554442222 2221 259999999987532
Q ss_pred CCChhhhHHhHHHHHHHHHHHHHH----cCCCeEEEecCccccCC-CCCCCCC----------------CCCCCCCCCCh
Q psy16545 83 MQEPLMYYKNNLIATINLLEVMKS----HGVYQLVFSSSCTVYGE-PQFLPIT----------------EDHPTGNIKNV 141 (600)
Q Consensus 83 ~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~r~I~~SS~~vyg~-~~~~~~~----------------E~~~~~~p~s~ 141 (600)
.........+|..+...+.+.... ........+++....-. ....+.. -.... .+..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~-~~~~~ 154 (257)
T d1fjha_ 76 TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ-GGNLA 154 (257)
T ss_dssp CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTT-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCC-cchHH
Confidence 344555677888888877766433 33445566655432211 0000000 00011 12346
Q ss_pred HHHHHHHHHHHHHHHHhhc--CCceEEEEecccccCCC
Q psy16545 142 YGKTKHFIEEMLKDLSKAH--KEWNIISLRYFNPVGAH 177 (600)
Q Consensus 142 Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 177 (600)
|+.||.+.+.+++.++.++ .|++++.+.||.+-.|.
T Consensus 155 Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~ 192 (257)
T d1fjha_ 155 YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL 192 (257)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----
T ss_pred HHHHhhhhhccccccccccccccccccccccCCcCChh
Confidence 9999999999999998776 48999999999997764
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.90 E-value=0.00012 Score=68.84 Aligned_cols=126 Identities=13% Similarity=0.081 Sum_probs=88.2
Q ss_pred HHHHHhhhCCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHH
Q psy16545 243 IRAIEQFTGKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM 313 (600)
Q Consensus 243 l~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~ 313 (600)
++...+-.+..+.++.+|+++++++.++++. -++|++||.|+...... +.++....+++|+.++..+.+++
T Consensus 42 l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~ 121 (256)
T d1k2wa_ 42 ARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAV 121 (256)
T ss_dssp HHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhc
Confidence 3333344477889999999999999887765 26999999999764332 22445677899999998888765
Q ss_pred HH----c-CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 314 KS----H-GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 314 ~~----~-~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.. . .-.++|++||.+.+-. .|....|+.+| ...+.+.+.++.+ +|+++..+-|+.
T Consensus 122 ~~~~~~~~~~g~Iv~isS~~~~~~------------~~~~~~Y~asK---aal~~lt~~lA~el~~~gIrVN~V~PG~ 184 (256)
T d1k2wa_ 122 ARAMIAGGRGGKIINMASQAGRRG------------EALVGVYCATK---AAVISLTQSAGLNLIRHGINVNAIAPGV 184 (256)
T ss_dssp HHHHHHHTSCEEEEEECCGGGTSC------------CTTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred cchhHHhccCCccccccchhhccc------------cccccchhhhh---hHHHHHHHHHHHHhcccCeEEEEEecCC
Confidence 42 2 2358999999765421 12247899999 5577777777765 456666665543
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.77 E-value=6.2e-05 Score=70.00 Aligned_cols=116 Identities=11% Similarity=0.077 Sum_probs=79.8
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCCC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVY 319 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~~~ 319 (600)
.+..+.+|+++++++.++++.. ++|++||.|+...... +.++....+++|+.++..+.+++. +.+-.
T Consensus 46 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g 125 (237)
T d1uzma1 46 GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFG 125 (237)
T ss_dssp TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE
T ss_pred CceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCC
Confidence 4567899999999888876652 6999999999754332 224556778999999877766544 44556
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
++|++||.+..... +....|+.|| ...+.+.+.++.+ +++++..+.|+.
T Consensus 126 ~Iv~isS~~~~~~~------------~~~~~Y~asK---aal~~lt~~lA~e~~~~gIrVN~I~PG~ 177 (237)
T d1uzma1 126 RMIFIGSVSGLWGI------------GNQANYAASK---AGVIGMARSIARELSKANVTANVVAPGY 177 (237)
T ss_dssp EEEEECCCCC-----------------CCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred ceEEEcchhhccCC------------cccHHHHHHH---HHHHHHHHHHHhhhhcCCceeeeeeeCc
Confidence 99999997654211 2236899999 5577788877765 456666666543
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.76 E-value=6.4e-05 Score=70.21 Aligned_cols=125 Identities=11% Similarity=0.048 Sum_probs=87.9
Q ss_pred HHHHhhhCCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH
Q psy16545 244 RAIEQFTGKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK 314 (600)
Q Consensus 244 ~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~ 314 (600)
+.+.+..+..+.++.+|+++++++.++++. -++|++||.|+...... +.++....+++|+.++..+.+++.
T Consensus 44 ~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~ 123 (244)
T d1nffa_ 44 KAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVV 123 (244)
T ss_dssp HHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHH
Confidence 334443456788999999999998887765 26999999999765432 224456778999999988887664
Q ss_pred H----cCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 315 S----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 315 ~----~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
. .+-.++|++||.+.+... +....|+.+| ...+.+.+.++.+ +|+++..+-|+.
T Consensus 124 ~~m~~~~~G~Ii~isS~~~~~~~------------~~~~~Y~asK---aal~~ltk~lA~el~~~gIrVN~I~PG~ 184 (244)
T d1nffa_ 124 KPMKEAGRGSIINISSIEGLAGT------------VACHGYTATK---FAVRGLTKSTALELGPSGIRVNSIHPGL 184 (244)
T ss_dssp HHHHHHTCEEEEEECCGGGTSCC------------TTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred hHHHhcCcceEEecccccccccc------------ccccchhhHH---HHHHHHHHHHHHHhcccCEEEEEEeeCC
Confidence 3 344689999997754221 2236899999 5677888877765 456666665543
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.75 E-value=6.6e-05 Score=70.48 Aligned_cols=118 Identities=13% Similarity=0.086 Sum_probs=85.4
Q ss_pred CCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCcccc----ccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+..+.++.+|+++++++.++++.. ++|++||.|+....... .++....+++|+.++..+.+++. +.+
T Consensus 58 g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~ 137 (251)
T d2c07a1 58 GYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR 137 (251)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC
Confidence 456889999999999988877652 69999999987644332 24556778899999888877655 345
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
-.++|++||.+.+-.. |....|+.|| ...+.+.+.++.+ +|+++..+.|+.
T Consensus 138 ~G~IVnisS~~~~~~~------------~~~~~Y~asK---aal~~ltr~lA~el~~~gIrVN~V~PG~ 191 (251)
T d2c07a1 138 YGRIINISSIVGLTGN------------VGQANYSSSK---AGVIGFTKSLAKELASRNITVNAIAPGF 191 (251)
T ss_dssp CEEEEEECCTHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred CeEEEEECCHHhcCCC------------CCCHHHHHHH---HHHHHHHHHHHHHhhhhCeEEEEEccCC
Confidence 5699999997654221 2236899999 5677888888765 456666666554
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.70 E-value=0.00039 Score=65.24 Aligned_cols=116 Identities=14% Similarity=0.084 Sum_probs=84.4
Q ss_pred CCceeEEEeecCChhhHHHHhhc----C-CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc-----
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK----H-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~----~-~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----- 316 (600)
+..+.++.+|+++++++.++++. + ++|++||.|+...... +.++....+++|+.++..+.+++..+
T Consensus 50 g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~ 129 (257)
T d2rhca1 50 GVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLE 129 (257)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHH
T ss_pred CCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHh
Confidence 45688999999999998887765 2 5899999999764332 23455678999999999999988642
Q ss_pred -CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhC---CCCeeEee
Q psy16545 317 -GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTG---NKPVPYIF 381 (600)
Q Consensus 317 -~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~---~~~~~~r~ 381 (600)
+..++|++||...+-.. |....|+.|| ...+.+.+.++.+.+ +++..+-|
T Consensus 130 ~~~g~Ii~i~S~~~~~~~------------~~~~~Y~asK---aal~~ltk~lA~el~~~gIrVN~I~P 183 (257)
T d2rhca1 130 RGTGRIVNIASTGGKQGV------------VHAAPYSASK---HGVVGFTKALGLELARTGITVNAVCP 183 (257)
T ss_dssp HTEEEEEEECCGGGTSCC------------TTCHHHHHHH---HHHHHHHHHHHHHTTTSEEEEEEEEE
T ss_pred cCCccccccccccccccc------------ccchhHHHHH---HHHHHHHHHHHHHhhhhCcEEEEEee
Confidence 34589999997654221 2236899999 667888888887753 44444444
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=97.69 E-value=7.1e-05 Score=70.35 Aligned_cols=119 Identities=13% Similarity=-0.008 Sum_probs=86.2
Q ss_pred hCCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----c
Q psy16545 250 TGKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----H 316 (600)
Q Consensus 250 ~~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~ 316 (600)
.+..+.++.+|+++++++.++++.. ++|++||.|+...... ..++....+++|+.++..+.+++.. .
T Consensus 49 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~ 128 (254)
T d1hdca_ 49 LGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA 128 (254)
T ss_dssp TGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred hCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc
Confidence 3567899999999999998877652 6999999999764332 2234556789999999888887753 3
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
+-.++|++||.+.+.. .|....|+.|| ...+.+.+.++.+ +++++..+-|+.
T Consensus 129 ~~G~II~isS~~~~~~------------~~~~~~Y~asK---aal~~lt~~lA~e~a~~gIrVN~I~PG~ 183 (254)
T d1hdca_ 129 GGGSIVNISSAAGLMG------------LALTSSYGASK---WGVRGLSKLAAVELGTDRIRVNSVHPGM 183 (254)
T ss_dssp TCEEEEEECCGGGTSC------------CTTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred CCCeecccccchhccc------------ccchhhHHHHH---HHHHHHHHHHHHHhCCCceEEEEeeeCc
Confidence 4569999999765422 12237899999 5677788777765 456666666543
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=97.68 E-value=0.0006 Score=63.85 Aligned_cols=118 Identities=15% Similarity=0.060 Sum_probs=83.6
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..+.++.+|+++++++.++++. -++|++||.|+...... +.++....+++|+.++.++.+++.. .+
T Consensus 49 g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~ 128 (255)
T d1gega_ 49 GGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEG 128 (255)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhc
Confidence 55788899999999988887665 26999999999764332 2244567788999999988887543 23
Q ss_pred -CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 318 -VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 318 -~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
-.++|++||.+.+.. .|....|+.+| ...+.+.+.++.+ +|+++..+-|+.
T Consensus 129 ~~g~Iv~isS~~~~~~------------~~~~~~Y~asK---aal~~ltk~lA~el~~~gIrVN~I~PG~ 183 (255)
T d1gega_ 129 HGGKIINACSQAGHVG------------NPELAVYSSSK---FAVRGLTQTAARDLAPLGITVNGYCPGI 183 (255)
T ss_dssp SCEEEEEECCGGGTSC------------CTTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred cccccccccchhhccc------------CcccccchhCH---HHHHhhHHHHHHHhhhhCcEEEEEecCc
Confidence 357999999765421 12247899999 5577777777765 356655555543
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=97.66 E-value=0.00015 Score=67.71 Aligned_cols=120 Identities=11% Similarity=0.078 Sum_probs=86.8
Q ss_pred hhCCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----
Q psy16545 249 FTGKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS---- 315 (600)
Q Consensus 249 l~~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~---- 315 (600)
..+.++.++.+|+++++++.++++. -++|++||.|+...... +.++....+++|+.++..+.+++..
T Consensus 49 ~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~ 128 (247)
T d2ew8a1 49 NLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKR 128 (247)
T ss_dssp HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHh
Confidence 3466789999999999998887664 26999999999864332 2345667889999999888887653
Q ss_pred cCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 316 HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 316 ~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.+-.++|++||.+.... .|....|+.|| ...+.+.+.++.+ +|+++..+.|+.
T Consensus 129 ~~~G~Iv~isS~~~~~~------------~~~~~~Y~asK---aal~~ltk~lA~ela~~gIrVN~I~PG~ 184 (247)
T d2ew8a1 129 NGWGRIINLTSTTYWLK------------IEAYTHYISTK---AANIGFTRALASDLGKDGITVNAIAPSL 184 (247)
T ss_dssp HTCEEEEEECCGGGGSC------------CSSCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred cCCCCccccccchhccc------------Ccccccchhhh---ccHHHHHHHHHHHhcccCeEEEEEeeCC
Confidence 34569999999765421 12236899999 5567777777764 466666666654
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.64 E-value=0.00021 Score=66.87 Aligned_cols=125 Identities=14% Similarity=0.097 Sum_probs=87.9
Q ss_pred HHhhhCCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc
Q psy16545 246 IEQFTGKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH 316 (600)
Q Consensus 246 ~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~ 316 (600)
+.+..+..+.++.+|+++++++.++++.. ++|++||.|+...... +.++....+++|+.++..+.+++..+
T Consensus 49 l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~ 128 (251)
T d1vl8a_ 49 LTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL 128 (251)
T ss_dssp HHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhc
Confidence 33344667889999999999988877652 6999999999754332 23455677889999998888877643
Q ss_pred ----CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 ----GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 ----~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+-.++|++||....-.. .+....|+.+| ...+.+.+.++.+ +|+++..+-|+.+
T Consensus 129 m~~~~~G~Ii~i~S~~~~~~~-----------~~~~~~Y~asK---aal~~lt~~lA~e~~~~gIrVN~I~PG~i 189 (251)
T d1vl8a_ 129 LRESDNPSIINIGSLTVEEVT-----------MPNISAYAASK---GGVASLTKALAKEWGRYGIRVNVIAPGWY 189 (251)
T ss_dssp HTTCSSCEEEEECCGGGTCCC-----------SSSCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECCB
T ss_pred ccccccccccccccchhcccc-----------CccccchHHHH---HhHHHHHHHHHHHhcccCeEEEEEeeCcc
Confidence 34699999986532110 11136899999 5577777777754 4677777776543
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=97.62 E-value=0.00013 Score=67.87 Aligned_cols=117 Identities=16% Similarity=0.169 Sum_probs=83.8
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..+.++.+|+++.+++.++++. -++|++||.|+...... +.++....+++|+.++..+.+++.. .+
T Consensus 56 g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~ 135 (240)
T d2bd0a1 56 GALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH 135 (240)
T ss_dssp TCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC
Confidence 45678899999999988887664 26899999999764333 2345567789999998887777664 34
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeec
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFY 382 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~ 382 (600)
-.++|++||.+.+... |....|+.|| ...+.+.+.++.+ +|+++..+.|+
T Consensus 136 ~G~Ii~isS~~~~~~~------------~~~~~Y~asK---~al~~lt~~la~el~~~gIrvn~i~PG 188 (240)
T d2bd0a1 136 SGHIFFITSVAATKAF------------RHSSIYCMSK---FGQRGLVETMRLYARKCNVRITDVQPG 188 (240)
T ss_dssp CEEEEEECCGGGTSCC------------TTCHHHHHHH---HHHHHHHHHHHHHHTTTTEEEEEEEEC
T ss_pred CCceEEEechhhcCCC------------CCChHHHHHH---HHHHHHHHHHHHHhCcCCeEEEEeeeC
Confidence 5699999997755321 2247899999 5567777777665 45565555554
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=97.62 E-value=0.00013 Score=68.78 Aligned_cols=121 Identities=15% Similarity=0.067 Sum_probs=87.0
Q ss_pred hhhCCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH---
Q psy16545 248 QFTGKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS--- 315 (600)
Q Consensus 248 ~l~~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~--- 315 (600)
...+..+.++.+|+++++++.++++. -++|++||.|+...... +.++....+++|+.++..+.+++..
T Consensus 51 ~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~ 130 (260)
T d1x1ta1 51 AQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMK 130 (260)
T ss_dssp HHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHh
Confidence 33466788999999999999887765 26999999999764332 2245567789999998887776553
Q ss_pred -cCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 316 -HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 316 -~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
.+-.++|++||.+.... .|....|+.+| ...+.+.+.++.+. |+++..+.|+.
T Consensus 131 ~~~~G~Iv~isS~~~~~~------------~~~~~~Y~asK---aal~~lt~~lA~el~~~gIrVN~I~PG~ 187 (260)
T d1x1ta1 131 KQGFGRIINIASAHGLVA------------SANKSAYVAAK---HGVVGFTKVTALETAGQGITANAICPGW 187 (260)
T ss_dssp HHTCEEEEEECCGGGTSC------------CTTCHHHHHHH---HHHHHHHHHHHHHHTTTTEEEEEEEECC
T ss_pred hcCCceEeecccccceec------------cCCcchhhhhh---hhHHHhHHHHHHHhchhCcEEEEEecCC
Confidence 34569999999765422 12236899999 56777888877654 56666666654
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.58 E-value=0.00015 Score=67.73 Aligned_cols=119 Identities=11% Similarity=-0.016 Sum_probs=85.8
Q ss_pred hCCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----c
Q psy16545 250 TGKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----H 316 (600)
Q Consensus 250 ~~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~ 316 (600)
.+.++.++.+|+++++++.++++. -++|++||.|+...... +.++....+++|+.++..+.+++.. .
T Consensus 49 ~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~ 128 (244)
T d1edoa_ 49 YGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK 128 (244)
T ss_dssp HTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc
Confidence 356788999999999998887665 26999999998765332 2345567889999998888776653 3
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
+-.++|++||.+.+-.. +....|+.+| ...+.+.+.++.+ +|+++..+-|+.
T Consensus 129 ~~G~IVnisS~~~~~~~------------~~~~~Y~asK---aal~~ltk~lA~el~~~gIrvN~I~PG~ 183 (244)
T d1edoa_ 129 RKGRIINIASVVGLIGN------------IGQANYAAAK---AGVIGFSKTAAREGASRNINVNVVCPGF 183 (244)
T ss_dssp TCEEEEEECCTHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHHTTTEEEEEEEECS
T ss_pred CCcEEEEEcChhhcCCC------------CCCHHHHHHH---HHHHHChHHHHHHHhhhCcEEEEEecce
Confidence 45699999997654211 2236899999 5577777777765 366666666543
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=97.55 E-value=0.00016 Score=68.00 Aligned_cols=116 Identities=19% Similarity=0.255 Sum_probs=87.3
Q ss_pred CCceeEEEeecCChhhHHHHhhcC----CccEEEEcccccCccccc----cChHHHHHHHHHHHHHHHHHHHHcCCCEEE
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH----DIDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEVMKSHGVYQLV 322 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~----~~d~VihlAa~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~~~~~~~~r~v 322 (600)
+..+.++.+|+++.+++.++++.. .++.|+|+++........ .+....+..|+.++.++.+++...+..++|
T Consensus 61 g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv 140 (259)
T d2fr1a1 61 GARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFV 140 (259)
T ss_dssp TCEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEE
T ss_pred cccccccccccchHHHHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEe
Confidence 567899999999999998887753 489999999976533322 233456789999999999988887778999
Q ss_pred EecCccc-ccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhCCCCeeEeecc
Q psy16545 323 FSSSCTV-YGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTGNKPVPYIFYN 383 (600)
Q Consensus 323 ~~SS~~v-Yg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~~~~~~~r~~~ 383 (600)
++||.+. +|.. ....|+.+| ...+.+.+.+. ..|++++.+.|+.
T Consensus 141 ~~SS~a~~~g~~-------------~~~~YaAak---a~l~~la~~~~-~~Gi~v~~I~pg~ 185 (259)
T d2fr1a1 141 LFSSFASAFGAP-------------GLGGYAPGN---AYLDGLAQQRR-SDGLPATAVAWGT 185 (259)
T ss_dssp EEEEHHHHTCCT-------------TCTTTHHHH---HHHHHHHHHHH-HTTCCCEEEEECC
T ss_pred eecchhhccCCc-------------ccHHHHHHH---HhHHHHHHHHH-hCCCCEEECCCCc
Confidence 9999654 3321 136799999 55677776654 4689998888764
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=97.54 E-value=0.00025 Score=66.65 Aligned_cols=119 Identities=16% Similarity=0.036 Sum_probs=84.9
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc-----cccChHHHHHHHHHHHHHHHHHHHH----c
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKS----H 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~~~~----~ 316 (600)
+..+.++.+|+++++++.++++. -++|++||.|+...... +.++....+++|+.++..+.+++.. .
T Consensus 54 ~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~ 133 (258)
T d1iy8a_ 54 DAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ 133 (258)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhh
Confidence 34678899999999998887765 26999999998653222 2345567889999999988887643 3
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+-.++|++||.+.+-. .|....|+.+| ...+.+.+.++.+ +++++..+-|+.+
T Consensus 134 ~~G~Ii~isS~~~~~~------------~~~~~~Y~asK---aal~~lt~~lA~el~~~gIrVN~i~PG~v 189 (258)
T d1iy8a_ 134 GSGMVVNTASVGGIRG------------IGNQSGYAAAK---HGVVGLTRNSAVEYGRYGIRINAIAPGAI 189 (258)
T ss_dssp TCCEEEEECCGGGTSB------------CSSBHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECSB
T ss_pred cCCCCcccccHhhccC------------CCCchHHHHHH---HHHHHHHHHHHHHhCccCceEEEEeeCcc
Confidence 4579999999765421 12247899999 5566777777654 4677777766543
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=97.51 E-value=0.00019 Score=67.02 Aligned_cols=115 Identities=18% Similarity=0.141 Sum_probs=83.1
Q ss_pred eeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCCCE
Q psy16545 254 VDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVYQ 320 (600)
Q Consensus 254 v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~r 320 (600)
..++.+|+++.++++++++. -++|++||.|+...... +.++....+++|+.++.++.+++.. .+-.+
T Consensus 50 ~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~ 129 (248)
T d2d1ya1 50 GAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGA 129 (248)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEE
T ss_pred CeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccc
Confidence 46789999999988887765 26999999999764332 2234567789999999988887764 34469
Q ss_pred EEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 321 LVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 321 ~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
+|++||.+.+-.. |...+|+.+| ...+.+.+.++.+ +|+++..+-|+.
T Consensus 130 Ii~isS~~~~~~~------------~~~~~Y~asK---aal~~ltk~lA~el~~~gIrVN~I~PG~ 180 (248)
T d2d1ya1 130 IVNVASVQGLFAE------------QENAAYNASK---GGLVNLTRSLALDLAPLRIRVNAVAPGA 180 (248)
T ss_dssp EEEECCGGGTSBC------------TTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred ccccccccccccc------------cccchhHHHH---HHHHHHHHHHHHHhhhhCcEEEEEeeCC
Confidence 9999997754321 2247899999 5577777777765 466666666544
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.49 E-value=0.00021 Score=66.53 Aligned_cols=116 Identities=16% Similarity=0.155 Sum_probs=82.9
Q ss_pred ceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----CCC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----GVY 319 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~~ 319 (600)
+.+++.+|++++++++++++.. ++|++||.|+...... +.++....+++|+.++..+.+++... +-.
T Consensus 50 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~ 129 (242)
T d1ulsa_ 50 GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPG 129 (242)
T ss_dssp TCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCE
T ss_pred CCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccc
Confidence 5678999999999998877652 6999999999764332 22455678899999999988877753 345
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+++.+||....+. |....|+.|| ...+.+.+.++.+ +|+++..+.|+.+
T Consensus 130 ~i~~~ss~~~~~~-------------~~~~~Y~asK---aal~~ltk~lA~ela~~gIrVN~I~PG~v 181 (242)
T d1ulsa_ 130 SIVLTASRVYLGN-------------LGQANYAASM---AGVVGLTRTLALELGRWGIRVNTLAPGFI 181 (242)
T ss_dssp EEEEECCGGGGCC-------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred eeeeeccccccCC-------------CCCcchHHHH---HHHHHHHHHHHHHHhhhCcEEEEEeeCcc
Confidence 6777777544332 2236899999 5567777777755 4677777766543
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.48 E-value=0.00023 Score=66.28 Aligned_cols=117 Identities=11% Similarity=-0.018 Sum_probs=84.6
Q ss_pred CceeEEEeecCChhhHHHHhhcC-CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----c-CCCEE
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----H-GVYQL 321 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~-~~~r~ 321 (600)
.++..+.+|+++.+.+++++++. ++|++||.|+...... +.++....+++|+.++..+.+++.. . +-.++
T Consensus 50 ~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~i 129 (242)
T d1cyda_ 50 PGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSI 129 (242)
T ss_dssp TTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcc
Confidence 35788999999999999999876 5899999999754332 2334566788999999988886543 2 23589
Q ss_pred EEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 322 VFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 322 v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
|++||.+.+... |....|+.+| ...+.+.+.++.+ +|+++..+-|+.
T Consensus 130 i~isS~~~~~~~------------~~~~~Y~asK---aal~~lt~~lA~e~~~~gIrvN~I~PG~ 179 (242)
T d1cyda_ 130 VNVSSMVAHVTF------------PNLITYSSTK---GAMTMLTKAMAMELGPHKIRVNSVNPTV 179 (242)
T ss_dssp EEECCGGGTSCC------------TTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred cccchhhccccC------------CccccccchH---HHHHHHHHHHHHHhCccCeecccCCCCC
Confidence 999997654321 2236899999 5677888888765 356666665543
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.46 E-value=0.00035 Score=65.45 Aligned_cols=118 Identities=13% Similarity=0.102 Sum_probs=84.1
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc---cccChHHHHHHHHHHHHHHHHHHHH----cCC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE---SMQEPLMYYKNNLIATINLLEVMKS----HGV 318 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~---~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~ 318 (600)
+..+.++.+|+++++++.++++. -++|++||.|+...... +.++....+++|+.++..+.+++.. .+-
T Consensus 59 g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~ 138 (255)
T d1fmca_ 59 GGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGG 138 (255)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccc
Confidence 55688999999999988887665 26999999999764322 2345567789999998888876654 344
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.++|++||.+.+... |....|+.+| ...+.+.+.++.+ +|+++..+-|+.
T Consensus 139 g~Ii~isS~~~~~~~------------~~~~~Y~asK---aal~~lt~~lA~el~~~gIrVN~I~PG~ 191 (255)
T d1fmca_ 139 GVILTITSMAAENKN------------INMTSYASSK---AAASHLVRNMAFDLGEKNIRVNGIAPGA 191 (255)
T ss_dssp EEEEEECCGGGTCCC------------TTCHHHHHHH---HHHHHHHHHHHHHHHTTTEEEEEEEECS
T ss_pred cccccccccchhccc------------cccccchhHH---HHHHHHHHHHHHHhCccCeEEEEeeeCc
Confidence 589999997654321 2247899999 5577777777765 356666665543
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=0.00019 Score=66.93 Aligned_cols=117 Identities=15% Similarity=0.099 Sum_probs=83.3
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccccc----cChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+.++..+.+|+++.+++.+.++. -++|++||.|+........ +.....+++|+.++.++.+++. +.+
T Consensus 55 ~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~ 134 (244)
T d1yb1a_ 55 GAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN 134 (244)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC
Confidence 56789999999999998887753 2599999999987544433 2345678899999888877655 445
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH------hCCCCeeEeec
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV------TGNKPVPYIFY 382 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~------~~~~~~~~r~~ 382 (600)
-.++|++||.+.+-.. |....|+.|| ...+.+.+.++.+ .|+++..+.|+
T Consensus 135 ~G~Iv~isS~~~~~~~------------~~~~~Y~asK---aal~~~~~~La~El~~~~~~gI~V~~i~PG 190 (244)
T d1yb1a_ 135 HGHIVTVASAAGHVSV------------PFLLAYCSSK---FAAVGFHKTLTDELAALQITGVKTTCLCPN 190 (244)
T ss_dssp CEEEEEECCCC-CCCH------------HHHHHHHHHH---HHHHHHHHHHHHHHHHTTCTTEEEEEEEET
T ss_pred CceEEEeecchhcCCC------------CCcHHHHHHH---HHHHHHHHHHHHHHHhhcCCCEEEEEEEcC
Confidence 5699999997754211 2236799999 5566677766654 35667676664
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.41 E-value=0.0002 Score=67.16 Aligned_cols=126 Identities=10% Similarity=0.003 Sum_probs=86.3
Q ss_pred HHHHHhhhCCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHH
Q psy16545 243 IRAIEQFTGKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVM 313 (600)
Q Consensus 243 l~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~ 313 (600)
++.+.+..+....++.+|+++.+++.++++.. ++|++||.|+...... +.++....+++|+.++..+.+++
T Consensus 43 ~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~ 122 (253)
T d1hxha_ 43 GQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQG 122 (253)
T ss_dssp HHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence 34444445677889999999999888877652 6899999999764322 22455678899999998888877
Q ss_pred HHc---CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH-----hCCCCeeEeecc
Q psy16545 314 KSH---GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV-----TGNKPVPYIFYN 383 (600)
Q Consensus 314 ~~~---~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~-----~~~~~~~~r~~~ 383 (600)
..+ +-.++|++||.+.+-. .|....|+.+| ...+.+.+.++.+ +++++..+-|+.
T Consensus 123 ~~~m~~~~G~Iv~isS~~~~~~------------~~~~~~Y~asK---aal~~lt~~lA~e~~~~g~~IrVN~I~PG~ 185 (253)
T d1hxha_ 123 IAAMKETGGSIINMASVSSWLP------------IEQYAGYSASK---AAVSALTRAAALSCRKQGYAIRVNSIHPDG 185 (253)
T ss_dssp HHHHTTTCEEEEEECCGGGTSC------------CTTBHHHHHHH---HHHHHHHHHHHHHHHHHTCCEEEEEEEESE
T ss_pred HHHHHhcCCceecccchhhhcC------------ccccccccchh---HHHHHHHHHHHHHHhhcCCCEEEEEEeECC
Confidence 643 2268999999765421 12246899999 4456666666543 246665665543
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.38 E-value=0.0004 Score=64.87 Aligned_cols=118 Identities=15% Similarity=0.105 Sum_probs=84.7
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcccc-----ccChHHHHHHHHHHHHHHHHHHHHc---CC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGES-----MQEPLMYYKNNLIATINLLEVMKSH---GV 318 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~-----~~~~~~~~~~Nv~gt~~ll~~~~~~---~~ 318 (600)
.++.++.+|++++++++++++. -++|++||.|+....... .++....+++|+.++.++.+++..+ +-
T Consensus 51 ~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~ 130 (250)
T d1ydea1 51 PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ 130 (250)
T ss_dssp TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC
Confidence 3578899999999998887765 269999999996533222 2345677899999998888877643 22
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.++|++||.+.+-.. |....|+.+| ...+.+.+.++.+ +++++..+.|+.+
T Consensus 131 G~Ii~isS~~~~~~~------------~~~~~Y~asK---aal~~lt~~lA~e~a~~gIrVN~I~PG~i 184 (250)
T d1ydea1 131 GNVINISSLVGAIGQ------------AQAVPYVATK---GAVTAMTKALALDESPYGVRVNCISPGNI 184 (250)
T ss_dssp CEEEEECCHHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECSB
T ss_pred CCCcccccccccccc------------cCcchhHHHH---hhHHHHHHHHHHHhcccCeEEEEEeeCCC
Confidence 699999997654221 2236899999 5567777777754 4677777776544
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=97.37 E-value=0.00073 Score=63.45 Aligned_cols=118 Identities=11% Similarity=-0.022 Sum_probs=83.4
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~ 317 (600)
+..+.++.+|+++++++.++++. -++|++||.|+...... +.++....+++|+.++..+.+++. +.+
T Consensus 56 g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~ 135 (261)
T d1geea_ 56 GGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEND 135 (261)
T ss_dssp TCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccc
Confidence 55688899999999998887765 26999999999764332 223456778999999888877655 334
Q ss_pred C-CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 318 V-YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 318 ~-~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
- .++|++||.+..-. .|....|+.+| ...+.+.+.++.+ +++++..+-|+.
T Consensus 136 ~g~~Iv~isS~~~~~~------------~~~~~~Y~asK---aal~~lt~~lA~e~~~~gIrVN~I~PG~ 190 (261)
T d1geea_ 136 IKGTVINMSSVHEKIP------------WPLFVHYAASK---GGMKLMTETLALEYAPKGIRVNNIGPGA 190 (261)
T ss_dssp CCCEEEEECCGGGTSC------------CTTCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECS
T ss_pred ccccccccccchhccc------------CccccccccCC---ccchhhHHHHHHHhhhhCcEEEEEeeCc
Confidence 3 46889999764421 12236899999 5567777777755 467776766654
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.34 E-value=0.00051 Score=63.85 Aligned_cols=117 Identities=14% Similarity=0.011 Sum_probs=85.2
Q ss_pred CceeEEEeecCChhhHHHHhhcC-CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH-----cCCCEE
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS-----HGVYQL 321 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~-----~~~~r~ 321 (600)
..+..+.+|+++.+.+++++++. ++|++||.|+...... +.++....+++|+.++..+.+++.. .+..++
T Consensus 52 ~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~I 131 (244)
T d1pr9a_ 52 PGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAI 131 (244)
T ss_dssp TTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCeEEEEeCCCHHHHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceE
Confidence 35788999999999999998876 5899999998765432 2245567789999998888776553 234689
Q ss_pred EEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 322 VFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 322 v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
|++||.+.... .|....|+.|| ...+.+.+.++.+ +++++..+.|+.
T Consensus 132 i~isS~~~~~~------------~~~~~~Y~asK---aal~~lt~~lA~el~~~gIrvN~I~PG~ 181 (244)
T d1pr9a_ 132 VNVSSQCSQRA------------VTNHSVYCSTK---GALDMLTKVMALELGPHKIRVNAVNPTV 181 (244)
T ss_dssp EEECCGGGTSC------------CTTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred eeccccccccc------------ccchhhhhhhH---HHHHHHHHHHHHHhCCCcEEEEEEeeCc
Confidence 99999765432 12236899999 5677888887765 466666666654
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=97.32 E-value=0.00047 Score=64.72 Aligned_cols=118 Identities=17% Similarity=0.125 Sum_probs=84.0
Q ss_pred CCceeEEEeecCChhhHHHHhhc----C--CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----c
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK----H--DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----H 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~----~--~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~ 316 (600)
+..+.++.+|+++++++.++++. . ++|++||.|+...... +.++....+++|+.++..+.+++.. .
T Consensus 56 g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~ 135 (259)
T d2ae2a_ 56 GFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS 135 (259)
T ss_dssp TCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred CCCceEEEeeCCCHHHHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhh
Confidence 45678899999999988876553 2 5899999999764332 2235567889999999888887653 3
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
+-.++|++||.+.... .|....|+.+| ...+.+.+.++.+ +++++..+-|+.
T Consensus 136 ~~G~Ii~isS~~~~~~------------~~~~~~Y~asK---aal~~lt~~lA~el~~~gIrVN~I~PG~ 190 (259)
T d2ae2a_ 136 ERGNVVFISSVSGALA------------VPYEAVYGATK---GAMDQLTRCLAFEWAKDNIRVNGVGPGV 190 (259)
T ss_dssp SSEEEEEECCGGGTSC------------CTTCHHHHHHH---HHHHHHHHHHHHHTGGGTEEEEEEEECS
T ss_pred cccccccccccccccc------------cccccchHHHH---HHHHHHHHHHHHHhCcCceEEEEeeeCc
Confidence 4469999999764321 12247899999 5677888888765 456666666544
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=97.30 E-value=0.00053 Score=64.39 Aligned_cols=118 Identities=13% Similarity=0.102 Sum_probs=84.1
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc-----cccChHHHHHHHHHHHHHHHHHHHH----c
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMKS----H 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~~~~----~ 316 (600)
+..+..+.+|+++++++.++++. -++|++||.|+...... +.++....+++|+.++..+.+++.. .
T Consensus 53 g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~ 132 (260)
T d1zema1 53 GVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ 132 (260)
T ss_dssp TSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh
Confidence 45678999999999988887765 26999999998653222 2234567788999999888887653 3
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
+-.++|++||.+.+... |....|+.+| ...+.+.+.++.+. |+++..+-|+.
T Consensus 133 ~~G~II~isS~~~~~~~------------~~~~~Y~asK---aal~~ltk~lA~el~~~gIrVN~I~PG~ 187 (260)
T d1zema1 133 NYGRIVNTASMAGVKGP------------PNMAAYGTSK---GAIIALTETAALDLAPYNIRVNAISPGY 187 (260)
T ss_dssp TCEEEEEECCHHHHSCC------------TTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred cCCCCCeeechhhccCC------------cchHHHHHHH---HHHHHHHHHHHHHhhhhCCEEEEeccCc
Confidence 44699999997654221 2236899999 55777777777654 56666665544
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.29 E-value=0.00051 Score=65.48 Aligned_cols=119 Identities=11% Similarity=0.109 Sum_probs=86.2
Q ss_pred CCceeEEEeecCChhhHHHHhhcC---CccEEEEcccccCccccc----cChHHHHHHHHHHHHHHHHHHH----HcCCC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAKH---DIDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEVMK----SHGVY 319 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~~---~~d~VihlAa~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~~~----~~~~~ 319 (600)
+..+..+.+|+++.+++.++++.. .+|++++.|+........ ++....+++|+.|+.++.+++. +.+-.
T Consensus 56 ~~~~~~~~~Dv~~~~~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G 135 (285)
T d1jtva_ 56 PGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG 135 (285)
T ss_dssp TTSEEEEECCTTCHHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CCceEEEeccccchHhhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCC
Confidence 457899999999999998887653 589999999876544332 3445678899999888877665 44557
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
++|++||.+..-. .|....|+.|| ...+.+.+.++.+ +|+++..+.|+.+
T Consensus 136 ~Iv~isS~~g~~~------------~~~~~~Y~asK---aal~~l~~~la~El~~~gIrVn~V~PG~v 188 (285)
T d1jtva_ 136 RVLVTGSVGGLMG------------LPFNDVYCASK---FALEGLCESLAVLLLPFGVHLSLIECGPV 188 (285)
T ss_dssp EEEEEEEGGGTSC------------CTTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred ceEEEechhhcCC------------CCCchHHHHHH---HHHHHHHHHHHHHhhccCcEEEEEecCCC
Confidence 9999999764321 12246899999 5566666666654 5788877777654
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=97.23 E-value=0.00054 Score=64.02 Aligned_cols=118 Identities=12% Similarity=0.050 Sum_probs=83.0
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HG 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~ 317 (600)
+..+.++.+|+++++++.++++. -++|++||.|+...... +.++....+++|+.++..+.+++.. .+
T Consensus 53 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~ 132 (251)
T d1zk4a1 53 PDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG 132 (251)
T ss_dssp TTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcC
Confidence 34688999999999988887765 26899999998864332 2234456789999999988887663 34
Q ss_pred CC-EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH-----hCCCCeeEeecc
Q psy16545 318 VY-QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV-----TGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~-r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~-----~~~~~~~~r~~~ 383 (600)
.. ++|++||.+.+-. .|....|+.+| ...+.+.+.++.+ +|+++..+.|+.
T Consensus 133 ~gg~Ii~isS~~~~~~------------~~~~~~Y~asK---aal~~lt~~lA~e~~l~~~gIrVN~I~PG~ 189 (251)
T d1zk4a1 133 LGASIINMSSIEGFVG------------DPSLGAYNASK---GAVRIMSKSAALDCALKDYDVRVNTVHPGY 189 (251)
T ss_dssp SCEEEEEECCGGGTSC------------CTTCHHHHHHH---HHHHHHHHHHHHHHHHTTCSEEEEEEEECC
T ss_pred CCCceEeeeccceecc------------CCCchhHHHHH---HHHhcchHHHHHHHhcCCCcEEEEEEeCCC
Confidence 33 8999999764421 12236899999 5566666666543 467766666654
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=97.19 E-value=0.00084 Score=63.29 Aligned_cols=118 Identities=13% Similarity=0.171 Sum_probs=82.7
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc------cccChHHHHHHHHHHHHHHHHHHHH----c
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE------SMQEPLMYYKNNLIATINLLEVMKS----H 316 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~------~~~~~~~~~~~Nv~gt~~ll~~~~~----~ 316 (600)
..+.++.+|+++++++.++++. -++|++||.|+...... ..++....+++|+.++..+.+++.. .
T Consensus 54 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~ 133 (268)
T d2bgka1 54 DVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA 133 (268)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhc
Confidence 3578899999999999887764 26899999998653221 2234566788999999888887764 3
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
+-.++|++||.+.+-... +...+|+.+| ...+.+.+.++.+ +|+++..+.|+.
T Consensus 134 ~~g~ii~iss~~~~~~~~-----------~~~~~Y~asK---aal~~lt~~lA~el~~~gIrVN~I~PG~ 189 (268)
T d2bgka1 134 KKGSIVFTASISSFTAGE-----------GVSHVYTATK---HAVLGLTTSLCTELGEYGIRVNCVSPYI 189 (268)
T ss_dssp TCEEEEEECCGGGTCCCT-----------TSCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEESC
T ss_pred CCCCcccccccccccccc-----------ccccccchhH---HHHHhCHHHHHHHhChhCeEEEecCCCC
Confidence 445899999876542111 1124799999 5677788777765 466666666654
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.15 E-value=0.001 Score=62.25 Aligned_cols=118 Identities=15% Similarity=0.160 Sum_probs=77.4
Q ss_pred CCceeEEEeecCChhhHHHHhhc----C--CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----c
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK----H--DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----H 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~----~--~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~ 316 (600)
+..+..+.+|+++++++.++++. + .+|++||.|+...... +.++....+++|+.++..+.+++.. .
T Consensus 56 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~ 135 (259)
T d1xq1a_ 56 GFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS 135 (259)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEeccCCCHHHHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccc
Confidence 44688999999999888776653 2 4899999999764332 2345567889999999888887653 3
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
+-.++|++||....-.. +....|+.+| ...+.+.+.++.+ +|+++..+-|+.
T Consensus 136 ~~G~Iv~isS~~~~~~~------------~~~~~Y~asK---aal~~lt~~lA~e~~~~gIrVN~V~PG~ 190 (259)
T d1xq1a_ 136 GCGNIIFMSSIAGVVSA------------SVGSIYSATK---GALNQLARNLACEWASDGIRANAVAPAV 190 (259)
T ss_dssp SSCEEEEEC----------------------CCHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred ccccccccccccccccc------------cccccccccc---cchhhhhHHHHHHhcccCeEEEEeccCc
Confidence 55799999996643211 2236899999 5567777777765 456666665543
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=97.11 E-value=0.0011 Score=61.47 Aligned_cols=119 Identities=18% Similarity=0.141 Sum_probs=84.6
Q ss_pred hCCceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc--CC
Q psy16545 250 TGKKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GV 318 (600)
Q Consensus 250 ~~~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~ 318 (600)
.+..+.++.+|+++++++.++++.. ++|++||.|+...... +.++....++.|+.++..+.+++... +-
T Consensus 49 ~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~ 128 (241)
T d2a4ka1 49 LEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG 128 (241)
T ss_dssp CCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred cCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccc
Confidence 3567888999999999998877653 6999999998754332 22344577899999999999988765 23
Q ss_pred CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 319 YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+.++.+||.+.... |....|+.+| ...|.+.+.++++. ++++..+.|+.+
T Consensus 129 ~~i~~~ss~a~~~~-------------~~~~~Y~~sK---~al~~lt~~lA~el~~~gIrvN~I~PG~v 181 (241)
T d2a4ka1 129 GSLVLTGSVAGLGA-------------FGLAHYAAGK---LGVVGLARTLALELARKGVRVNVLLPGLI 181 (241)
T ss_dssp CEEEEECCCTTCCH-------------HHHHHHHHCS---SHHHHHHHHHHHHHTTTTCEEEEEEECSB
T ss_pred cceeeccccccccc-------------cCccccchhh---HHHHHHHHHHHHHHhHhCCEEeeeccCcC
Confidence 45666666543221 1136799999 66889999988775 466666666543
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=97.05 E-value=0.0014 Score=62.03 Aligned_cols=115 Identities=13% Similarity=0.106 Sum_probs=79.6
Q ss_pred HHHHHhhhCCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcccc-----cc----ChHHHHHHHHHHHHH
Q psy16545 243 IRAIEQFTGKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGES-----MQ----EPLMYYKNNLIATIN 308 (600)
Q Consensus 243 l~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~-----~~----~~~~~~~~Nv~gt~~ 308 (600)
+..+.+..+..+..+.+|+++.+++.++++. -++|++||.|+....... .+ +....+++|+.++..
T Consensus 42 l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~ 121 (276)
T d1bdba_ 42 LAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIH 121 (276)
T ss_dssp HHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHH
Confidence 3344444566789999999999988887654 268999999986432221 11 245778999999888
Q ss_pred HHHHHHH----cCCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHhC
Q psy16545 309 LLEVMKS----HGVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVTG 373 (600)
Q Consensus 309 ll~~~~~----~~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~~ 373 (600)
+.+++.. .+ .++|++||.+.+-. .|....|+.+| ...+.+.+.++.+.+
T Consensus 122 ~~~~~~p~m~~~~-g~iI~i~S~~~~~~------------~~~~~~Y~asK---aal~~ltr~lA~ela 174 (276)
T d1bdba_ 122 AVKACLPALVASR-GNVIFTISNAGFYP------------NGGGPLYTAAK---HAIVGLVRELAFELA 174 (276)
T ss_dssp HHHHHHHHHHHHT-CEEEEECCGGGTST------------TSSCHHHHHHH---HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcC-CCceeeeechhccC------------CCCCchHHHHH---HHHHHHHHHHHHHhh
Confidence 8776653 33 58888888654311 12236799999 567888888887765
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=97.04 E-value=0.0019 Score=60.39 Aligned_cols=118 Identities=14% Similarity=0.157 Sum_probs=84.2
Q ss_pred CCceeEEEeecCChhhHHHHhhc----C--CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----c
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK----H--DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----H 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~----~--~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~ 316 (600)
+..+.++.+|+++.+.++++++. . .+|+++|+|+...... ..++....++.|+.++..+.+++.. .
T Consensus 54 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~ 133 (258)
T d1ae1a_ 54 GLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS 133 (258)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEeecCCHHHHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccc
Confidence 45678899999999988776543 2 4899999998765332 2245567789999999888877653 3
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
+..++|++||.+..... |....|+.+| ...+.+.+.++.+. ++++-.+.|+.
T Consensus 134 ~~g~ii~isS~~~~~~~------------~~~~~Y~~sK---~al~~lt~~lA~el~~~gIrvN~I~PG~ 188 (258)
T d1ae1a_ 134 QNGNVIFLSSIAGFSAL------------PSVSLYSASK---GAINQMTKSLACEWAKDNIRVNSVAPGV 188 (258)
T ss_dssp TSEEEEEECCGGGTSCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred ccccccccccccccccc------------ccchhHHHHH---HHHHHHHHHHHHhcCcCcEEEEEEeeCc
Confidence 45799999997764321 2247899999 56778888887664 56666666543
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.03 E-value=0.003 Score=58.56 Aligned_cols=122 Identities=14% Similarity=0.065 Sum_probs=80.5
Q ss_pred CCceeEEEeecCChhhHHHHhhc-------CCccEEEEcccccCccccc-----cChHHHHHHHHHHHHHHHHHHHHc--
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-------HDIDCVIHFAAVKAVGESM-----QEPLMYYKNNLIATINLLEVMKSH-- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-------~~~d~VihlAa~~~~~~~~-----~~~~~~~~~Nv~gt~~ll~~~~~~-- 316 (600)
+.++.++.+|+++++++.++++. .++|++||.|+........ .+....+++|+.++..+.+++...
T Consensus 52 ~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~ 131 (248)
T d1snya_ 52 HSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLK 131 (248)
T ss_dssp CTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEEeccHHHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 46789999999999888876553 3589999999975433222 234567889999988887766421
Q ss_pred -------------CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEe
Q psy16545 317 -------------GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYI 380 (600)
Q Consensus 317 -------------~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r 380 (600)
+-.++|.+||..-. ... +..+....|+.|| .....+.+.++.+ .++++..+.
T Consensus 132 ~~~~~~~~~~~~~~~g~ii~i~S~~g~--~~~-------~~~~~~~~Y~aSK---aal~~lt~~la~e~~~~gI~vn~v~ 199 (248)
T d1snya_ 132 KAAKANESQPMGVGRAAIINMSSILGS--IQG-------NTDGGMYAYRTSK---SALNAATKSLSVDLYPQRIMCVSLH 199 (248)
T ss_dssp HHHHHTTTSCSSTTTCEEEEECCGGGC--STT-------CCSCCCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEC
T ss_pred Hhhhccccccccccccccccccccccc--cCC-------CCCCChHHHHHHH---HHHHHHHHHHHHHhCCCCeEEEEcC
Confidence 24689999996422 110 1112235899999 4455666665543 467777776
Q ss_pred eccc
Q psy16545 381 FYNL 384 (600)
Q Consensus 381 ~~~~ 384 (600)
|+.+
T Consensus 200 PG~v 203 (248)
T d1snya_ 200 PGWV 203 (248)
T ss_dssp CCSB
T ss_pred CCcc
Confidence 6543
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.02 E-value=0.0012 Score=63.24 Aligned_cols=117 Identities=12% Similarity=0.057 Sum_probs=82.9
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH----G 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~----~ 317 (600)
+.++..+.+|+++++++.++++. -++|++||.|+...... ..++....+++|+.++..+.+++... +
T Consensus 65 ~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~ 144 (297)
T d1yxma1 65 QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH 144 (297)
T ss_dssp CCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH
T ss_pred CceEEEEeccCCCHHHHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc
Confidence 45688999999999998887764 26999999998754332 22345667899999999988877642 3
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
-.++|.+||....+. |....|+.+| ...+.+.+.++.+ +|+++..+.|+.
T Consensus 145 ~g~Ii~~ss~~~~~~-------------~~~~~Y~asK---aal~~ltk~lA~el~~~gIrVN~I~PG~ 197 (297)
T d1yxma1 145 GGSIVNIIVPTKAGF-------------PLAVHSGAAR---AGVYNLTKSLALEWACSGIRINCVAPGV 197 (297)
T ss_dssp CEEEEEECCCCTTCC-------------TTCHHHHHHH---HHHHHHHHHHHHHTGGGTEEEEEEEECS
T ss_pred ccccccccccccccc-------------cccccchhHH---HHHHHHHHHHHHHhcccCceEEEeeeCc
Confidence 457888876443221 2237899999 5678888888765 456666666654
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.99 E-value=0.001 Score=63.77 Aligned_cols=115 Identities=10% Similarity=0.026 Sum_probs=79.2
Q ss_pred ceeEEEeecCChhhHHHHhhc----C-CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCCC
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAK----H-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS----HGVY 319 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~----~-~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~ 319 (600)
......+|+.+.+.+++.++. + ++|++||.|+...... +.++....+++|+.++..+.+++.. .+-.
T Consensus 63 ~~~~~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G 142 (302)
T d1gz6a_ 63 RGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYG 142 (302)
T ss_dssp TTCEEEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE
T ss_pred cccccccccchHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCc
Confidence 345566788887766665443 2 6999999999765432 2234567789999999888887653 4556
Q ss_pred EEEEecCcccc-cCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 320 QLVFSSSCTVY-GEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 320 r~v~~SS~~vY-g~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
++|++||.+.+ |. +....|+.|| ...+.+.+.++.+ +|+++..+-|+.
T Consensus 143 ~IV~isS~~~~~~~-------------~~~~~Y~asK---aal~~lt~~la~E~~~~gIrVN~I~PG~ 194 (302)
T d1gz6a_ 143 RIIMTASASGIYGN-------------FGQANYSAAK---LGLLGLANTLVIEGRKNNIHCNTIAPNA 194 (302)
T ss_dssp EEEEECCHHHHHCC-------------TTCHHHHHHH---HHHHHHHHHHHHHTGGGTEEEEEEEEEC
T ss_pred EEEEeCChhhcCCC-------------CCcHHHHHHH---HHHHHHHHHHHHHHhccCCceeeeCCCC
Confidence 99999997643 32 2237899999 5567777777765 466666666543
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.98 E-value=0.0013 Score=61.79 Aligned_cols=118 Identities=16% Similarity=0.093 Sum_probs=78.5
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc--------cccChHHHHHHHHHHHHHHHHHHHHc--
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE--------SMQEPLMYYKNNLIATINLLEVMKSH-- 316 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~~~~~~-- 316 (600)
.++.++.+|+++.+++.++++. -++|++||.|+...... +.++....+++|+.++..+.+++..+
T Consensus 57 ~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~ 136 (264)
T d1spxa_ 57 QNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLS 136 (264)
T ss_dssp GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccc
Confidence 3588999999999998887765 26999999998642211 22345677889999998888877643
Q ss_pred -CCCEEEEecCcc-cccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 -GVYQLVFSSSCT-VYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 -~~~r~v~~SS~~-vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+-.++|.++|+. .+.. .|....|+.+| ...+.+.+.++.+ +|+++..+.|+.+
T Consensus 137 ~~~g~iI~~~S~~~~~~~------------~~~~~~Y~asK---aal~~lt~~lA~el~~~gIrVN~V~PG~v 194 (264)
T d1spxa_ 137 STKGEIVNISSIASGLHA------------TPDFPYYSIAK---AAIDQYTRNTAIDLIQHGIRVNSISPGLV 194 (264)
T ss_dssp HHTCEEEEECCTTSSSSC------------CTTSHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECCB
T ss_pred cccCcceeeeeecccccc------------CCCchhhhhhh---hhHHHHHHHHHHHhcccCeEEEEEeeCCC
Confidence 224666665543 2211 12236799999 5567777777654 4677777777654
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.97 E-value=0.00065 Score=63.46 Aligned_cols=114 Identities=10% Similarity=0.078 Sum_probs=77.0
Q ss_pred EEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc-----cccChHHHHHHHHHHHHHHHHHHH----HcCCCEE
Q psy16545 256 FYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE-----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQL 321 (600)
Q Consensus 256 ~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~~~r~ 321 (600)
+..+|+.+.+++.++++. -++|++||.|+...... +.++....+++|+.++..+.+++. +.+-.++
T Consensus 47 ~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~I 126 (252)
T d1zmta1 47 YPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHI 126 (252)
T ss_dssp CTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred EEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccccccee
Confidence 345677777766665543 26899999988643222 223455677899999888777665 3345799
Q ss_pred EEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 322 VFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 322 v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
|++||.+.+... +....|+.+| ...+.+.+.++.+ +++++..+.|+.+
T Consensus 127 V~isS~~~~~~~------------~~~~~Y~asK---aal~~lt~~lA~ela~~gIrVN~I~PG~i 177 (252)
T d1zmta1 127 IFITSATPFGPW------------KELSTYTSAR---AGACTLANALSKELGEYNIPVFAIGPNYL 177 (252)
T ss_dssp EEECCSTTTSCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTCCEEEEEESSB
T ss_pred eccccccccccc------------cccccccccc---ccHHHHHHHHHHHhcccCcEEEEEecCCC
Confidence 999997654321 2236899999 5567777777754 4788888777653
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.95 E-value=0.0025 Score=59.52 Aligned_cols=118 Identities=14% Similarity=0.093 Sum_probs=80.8
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC-
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHG- 317 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~- 317 (600)
..+.++.+|+++++++.++++. .++|++||.|+...... +.++....++.|+.+...+..++. +.+
T Consensus 61 ~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~ 140 (257)
T d1xg5a_ 61 GTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV 140 (257)
T ss_dssp SEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred ceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhcc
Confidence 3678899999999988887665 26999999999764332 234556778899999888777654 333
Q ss_pred -CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH-----hCCCCeeEeec
Q psy16545 318 -VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV-----TGNKPVPYIFY 382 (600)
Q Consensus 318 -~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~-----~~~~~~~~r~~ 382 (600)
-.++|++||.+-+.... .+....|+.+| ...+.+.+.++.+ +++++..+-|+
T Consensus 141 ~~g~Ii~isS~~~~~~~p----------~~~~~~Y~~sK---aal~~ltr~la~el~~~~~~I~vn~i~PG 198 (257)
T d1xg5a_ 141 DDGHIININSMSGHRVLP----------LSVTHFYSATK---YAVTALTEGLRQELREAQTHIRATCISPG 198 (257)
T ss_dssp CSCEEEEECCGGGTSCCS----------CGGGHHHHHHH---HHHHHHHHHHHHHHHHTTCCCEEEEEEES
T ss_pred CCCceEEEechHhcCCCC----------CcccHHHHHHH---HHHHhCHHHHHHHHHhCCCCEEEEEEeCC
Confidence 36999999977542211 01135699999 5567777777643 45665565554
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.90 E-value=0.0018 Score=61.13 Aligned_cols=118 Identities=14% Similarity=0.083 Sum_probs=81.4
Q ss_pred CceeEEEeecCChhhHHHHhhcC-----CccEEEEcccccCccc------cccChHHHHHHHHHHHHHHHHHHHH----c
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-----DIDCVIHFAAVKAVGE------SMQEPLMYYKNNLIATINLLEVMKS----H 316 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-----~~d~VihlAa~~~~~~------~~~~~~~~~~~Nv~gt~~ll~~~~~----~ 316 (600)
..+.++.+|+++++++.++++.. ++|++||.|+...... +.++....+++|+.++..+.+++.. .
T Consensus 56 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~ 135 (274)
T d1xhla_ 56 EKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT 135 (274)
T ss_dssp GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred cceEEEEeeCCCHHHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc
Confidence 35789999999999888877652 6899999998642221 2234567788999999888877764 3
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+-.+++++||.+.... .+....|+.+| ...+.+.+.++.+ +|+++..+-|+.+
T Consensus 136 ~~g~ii~~ss~~~~~~------------~~~~~~Y~asK---aal~~ltk~lA~ela~~gIrVN~I~PG~i 191 (274)
T d1xhla_ 136 KGEIVNVSSIVAGPQA------------HSGYPYYACAK---AALDQYTRCTAIDLIQHGVRVNSVSPGAV 191 (274)
T ss_dssp TCEEEEECCGGGSSSC------------CTTSHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECCB
T ss_pred ccccccchhhhhcccc------------CCCCceehhhh---hHHHHHHHHHHHHHhHhCCceeeeccCCC
Confidence 4457888877553321 12236799999 5567777777655 4677777776543
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.88 E-value=0.0019 Score=60.94 Aligned_cols=118 Identities=18% Similarity=0.093 Sum_probs=78.8
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcccc----cc----ChHHHHHHHHHHHHHHHHHHHHc--
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGES----MQ----EPLMYYKNNLIATINLLEVMKSH-- 316 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~----~~----~~~~~~~~Nv~gt~~ll~~~~~~-- 316 (600)
..+.++.+|+++++++.++++. -++|++||.|+....... .+ +....+++|+.++..+.+++..+
T Consensus 57 ~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~ 136 (272)
T d1xkqa_ 57 KQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLV 136 (272)
T ss_dssp GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccc
Confidence 3578999999999998887765 269999999987543211 11 24567889999998888877643
Q ss_pred -CCCEEEEecC-cccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 317 -GVYQLVFSSS-CTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 317 -~~~r~v~~SS-~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+-.++|.++| .+.... .|....|+.+| ...+.+.+.++.+ +|+++..+-|+.+
T Consensus 137 ~~~g~iI~~~Ss~a~~~~------------~~~~~~Y~asK---aal~~ltk~lA~el~~~gIrVN~I~PG~i 194 (272)
T d1xkqa_ 137 ASKGEIVNVSSIVAGPQA------------QPDFLYYAIAK---AALDQYTRSTAIDLAKFGIRVNSVSPGMV 194 (272)
T ss_dssp HHTCEEEEECCGGGSSSC------------CCSSHHHHHHH---HHHHHHHHHHHHHHHTTTCEEEEEEECCB
T ss_pred ccCCccccccchhccccC------------CCCcchhhhHH---HHHHHHHHHHHHHhcccCeEEEEEeeCCC
Confidence 2245555555 332211 12236899999 5567777777654 4677777766543
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.84 E-value=0.0032 Score=58.39 Aligned_cols=132 Identities=11% Similarity=-0.017 Sum_probs=83.4
Q ss_pred HHHHhhhCCceeEEEeecCChhhHHHHhhc-------CCccEEEEcccccCcccc-----ccChHHHHHHHHHHHHHHHH
Q psy16545 244 RAIEQFTGKKVDFYSCDLVDKNRLGEIFAK-------HDIDCVIHFAAVKAVGES-----MQEPLMYYKNNLIATINLLE 311 (600)
Q Consensus 244 ~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~-------~~~d~VihlAa~~~~~~~-----~~~~~~~~~~Nv~gt~~ll~ 311 (600)
..+++..+.+++++.+|+++.+++.++++. .++|++||.|+....... .++....+++|+.|+..+.+
T Consensus 43 ~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 122 (250)
T d1yo6a1 43 TELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQ 122 (250)
T ss_dssp HHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHH
Confidence 344555567899999999999888776553 248999999997533221 22345678999999988887
Q ss_pred HHHH----c-----------CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hC
Q psy16545 312 VMKS----H-----------GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TG 373 (600)
Q Consensus 312 ~~~~----~-----------~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~ 373 (600)
++.. . ...+++..||...+-..... ..+..+ ...|+.|| .....+.+.++.+ .+
T Consensus 123 ~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~----~~~~~~-~~aY~aSK---aal~~l~~~la~el~~~g 194 (250)
T d1yo6a1 123 KLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS----GSAQFP-VLAYRMSK---AAINMFGRTLAVDLKDDN 194 (250)
T ss_dssp HTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS----TTSSSC-BHHHHHHH---HHHHHHHHHHHHHTGGGT
T ss_pred HHHHHHHHhccCCCCccccceeccccccccccccccCCcc----cccchh-HHHHHHHH---HHHHHHHHHHHHHhcccC
Confidence 7642 1 12467777775544221110 011112 25699999 5556666666654 46
Q ss_pred CCCeeEeecc
Q psy16545 374 NKPVPYIFYN 383 (600)
Q Consensus 374 ~~~~~~r~~~ 383 (600)
+++..+.|+.
T Consensus 195 I~v~~i~PG~ 204 (250)
T d1yo6a1 195 VLVVNFCPGW 204 (250)
T ss_dssp CEEEEEECCC
T ss_pred eEEEEEecCC
Confidence 7766666553
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=96.83 E-value=1.2e-05 Score=72.46 Aligned_cols=76 Identities=8% Similarity=-0.086 Sum_probs=48.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEecccc--------------------cccccChHHhhhHHhhhhcccccccCCC
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARR--------------------EGDIVSMYANTDLAQKELGWSARCTHDI 67 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 67 (600)
-|||++|.+|..+++.... .+.+++..+|+ .+|+.+.+.+.+ ++. ++
T Consensus 27 lItGasgGIG~~ia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---------~~~--~i 93 (191)
T d1luaa1 27 VVLAGTGPVGMRSAALLAG--EGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAE---------AVK--GA 93 (191)
T ss_dssp EEETTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHH---------HTT--TC
T ss_pred EEECCCHHHHHHHHHHHHh--hccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHH---------Hhc--Cc
Confidence 4899999999999764433 33445545554 367888887777 665 79
Q ss_pred CEEEEcCcccCcccCCCChhhhHHhHHHH
Q psy16545 68 DCVIHFAAVKAVGESMQEPLMYYKNNLIA 96 (600)
Q Consensus 68 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~g 96 (600)
|+||||||........++++..+++|+.+
T Consensus 94 Dilin~Ag~g~~~~~~e~~~~~~~~nv~~ 122 (191)
T d1luaa1 94 HFVFTAGAIGLELLPQAAWQNESSIEIVA 122 (191)
T ss_dssp SEEEECCCTTCCCBCHHHHHTCTTCCEEE
T ss_pred CeeeecCccccccCCHHHHHhhhcceeeh
Confidence 99999998643222223333344444433
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=96.82 E-value=0.0036 Score=58.22 Aligned_cols=114 Identities=12% Similarity=0.096 Sum_probs=79.7
Q ss_pred CCceeEEEeecC-ChhhHHHHhhc-----CCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc-------C
Q psy16545 251 GKKVDFYSCDLV-DKNRLGEIFAK-----HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH-------G 317 (600)
Q Consensus 251 ~~~v~~i~~Dl~-~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-------~ 317 (600)
+.++.++.+|++ +..++.++++. -++|++|+.|+... .+.....+++|+.++.++..++... .
T Consensus 54 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~ 129 (254)
T d1sbya1 54 KVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGP 129 (254)
T ss_dssp TSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCC
T ss_pred CCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCC
Confidence 347889999998 55556655543 26899999999643 4567789999999998888877642 1
Q ss_pred CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHH---HhCCCCeeEeecc
Q psy16545 318 VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER---VTGNKPVPYIFYN 383 (600)
Q Consensus 318 ~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~---~~~~~~~~~r~~~ 383 (600)
..++|++||.+.+... +....|+.||. ....+.+.++. .+++++..+-|+.
T Consensus 130 ~g~Ii~isS~~~~~~~------------~~~~~Y~asKa---al~~~t~~la~el~~~gIrVn~I~PG~ 183 (254)
T d1sbya1 130 GGIIANICSVTGFNAI------------HQVPVYSASKA---AVVSFTNSLAKLAPITGVTAYSINPGI 183 (254)
T ss_dssp CEEEEEECCGGGTSCC------------TTSHHHHHHHH---HHHHHHHHHHHHHHHHSEEEEEEEECS
T ss_pred CceEEEEechhhccCC------------CCCHHHHHHHH---HHHHHHHHHHhhccccCeEEEEEEeCC
Confidence 2579999997765321 22368999994 45555555554 3577777777654
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.76 E-value=0.0021 Score=59.96 Aligned_cols=114 Identities=17% Similarity=0.139 Sum_probs=79.8
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccccccChHHHHHHHHHHHHHHHHHHHHc----C---CC
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGESMQEPLMYYKNNLIATINLLEVMKSH----G---VY 319 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~---~~ 319 (600)
.++.++.+|++++++++++++. -++|++||.|+... ..+....++.|+.++.++..++..+ + -.
T Consensus 54 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAg~~~----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g 129 (254)
T d2gdza1 54 QKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGG 129 (254)
T ss_dssp GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCE
T ss_pred CcEEEEEeecCCHHHHHHHHHHHHHHcCCcCeecccccccc----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCc
Confidence 4678899999999988887764 26899999998754 3467788999998887777766532 2 14
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHH--HHH---HhCCCCeeEeeccc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRT--FER---VTGNKPVPYIFYNL 384 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~--~~~---~~~~~~~~~r~~~~ 384 (600)
++|++||.+.+-. .|....|+.|| ...+.+.+. ++. .+++++..+.|+.+
T Consensus 130 ~Iv~isS~~~~~~------------~~~~~~Y~asK---aal~~ltrs~ala~e~~~~gIrVN~I~PG~i 184 (254)
T d2gdza1 130 IIINMSSLAGLMP------------VAQQPVYCASK---HGIVGFTRSAALAANLMNSGVRLNAICPGFV 184 (254)
T ss_dssp EEEEECCGGGTSC------------CTTCHHHHHHH---HHHHHHHHHHHHHHHHHTCCEEEEEEEESCB
T ss_pred EEEeeccHhhccC------------CCCccchHHHH---HHHHHHHHHHHHHHHhcCCCEEEEEEEcCCC
Confidence 6999999765421 12236899999 445666654 222 34677766666543
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.76 E-value=0.0035 Score=58.48 Aligned_cols=116 Identities=16% Similarity=0.074 Sum_probs=79.3
Q ss_pred CCceeEEEeecCChhhHHHHhhc---------CCccEEEEcccccCccc-------cccChHHHHHHHHHHHHHHHHHHH
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK---------HDIDCVIHFAAVKAVGE-------SMQEPLMYYKNNLIATINLLEVMK 314 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~---------~~~d~VihlAa~~~~~~-------~~~~~~~~~~~Nv~gt~~ll~~~~ 314 (600)
+.++.++.+|+++++++.++++. ..++++++.|+...... ..++....+++|+.++..+.+++.
T Consensus 59 ~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~ 138 (259)
T d1oaaa_ 59 DLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTL 138 (259)
T ss_dssp TSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CceEEEEEccCCCHHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHH
Confidence 34688999999999988887642 24678999988643211 113445678999999999999887
Q ss_pred Hc----C--CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH-hCCCCeeEee
Q psy16545 315 SH----G--VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV-TGNKPVPYIF 381 (600)
Q Consensus 315 ~~----~--~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~-~~~~~~~~r~ 381 (600)
.+ + -.++|++||.+.+-. .|....|+.|| ...+.+.+.++.+ +++++..+.|
T Consensus 139 ~~m~~~~~~~g~Iv~isS~~~~~~------------~~~~~~Y~asK---aal~~lt~~la~e~~gIrVn~v~P 197 (259)
T d1oaaa_ 139 NAFQDSPGLSKTVVNISSLCALQP------------YKGWGLYCAGK---AARDMLYQVLAAEEPSVRVLSYAP 197 (259)
T ss_dssp HTSCCCTTCEEEEEEECCGGGTSC------------CTTCHHHHHHH---HHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred HHHHhcCCCcccccccccccccCC------------CccchHHHHHH---HHHHHHHHHHHhCCCCCEEEEEEc
Confidence 64 1 248999999765421 12247899999 5577777777765 3444444443
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=96.67 E-value=0.0023 Score=59.64 Aligned_cols=117 Identities=11% Similarity=0.058 Sum_probs=82.3
Q ss_pred CceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcc--------ccccChHHHHHHHHHHHHHHHHHHHHc--
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVG--------ESMQEPLMYYKNNLIATINLLEVMKSH-- 316 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~--------~~~~~~~~~~~~Nv~gt~~ll~~~~~~-- 316 (600)
....++.+|++++++++++++. -++|++||.|+..... ...++....++.|+.++..+.+++...
T Consensus 58 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~ 137 (256)
T d1ulua_ 58 GGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLR 137 (256)
T ss_dssp TCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE
T ss_pred CcccccccccCCHHHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhc
Confidence 3567899999999988887664 2689999999864321 122334567889999999998887654
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
.-.++|++||...... .|....|+.+| ...+.+.+.++.+ +|+++..+.|+.
T Consensus 138 ~~G~Iv~isS~~~~~~------------~~~~~~Y~asK---aal~~ltr~lA~ela~~gIrVN~I~PG~ 192 (256)
T d1ulua_ 138 EGGGIVTLTYYASEKV------------VPKYNVMAIAK---AALEASVRYLAYELGPKGVRVNAISAGP 192 (256)
T ss_dssp EEEEEEEEECGGGTSB------------CTTCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECC
T ss_pred cCCEEEEEeehHhcCC------------CCCchHHHHHH---HHHHHHHHHHHHHhcccCCEEeeeccce
Confidence 1247999999765422 12237899999 5577888887765 467766666654
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.64 E-value=0.0034 Score=58.55 Aligned_cols=120 Identities=13% Similarity=0.070 Sum_probs=83.1
Q ss_pred hCCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc--CC
Q psy16545 250 TGKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GV 318 (600)
Q Consensus 250 ~~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~ 318 (600)
.+..+.++.+|+++.+++.+.++. .++|++||.|+...... +.+.....+.+|+.+...+++++..+ .-
T Consensus 54 ~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~ 133 (259)
T d1ja9a_ 54 LGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG 133 (259)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE
T ss_pred cCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC
Confidence 355788999999999888887664 36999999999864433 22344577889999999999988864 12
Q ss_pred CEEEEecCc-ccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 319 YQLVFSSSC-TVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 319 ~r~v~~SS~-~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.+++.++|. +.+.. .|....|+.+| ...+.+++.++.+ +++++..+.|+.+
T Consensus 134 g~~iii~s~~~~~~~------------~~~~~~Y~asK---~al~~l~r~lA~e~~~~gIrvN~I~PG~i 188 (259)
T d1ja9a_ 134 GRIILTSSIAAVMTG------------IPNHALYAGSK---AAVEGFCRAFAVDCGAKGVTVNCIAPGGV 188 (259)
T ss_dssp EEEEEECCGGGTCCS------------CCSCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECCB
T ss_pred CcccccccccccccC------------CCCchhHHHHH---HHHHHHHHHHHHHHhhcCeEEeccCcCCc
Confidence 356666553 33321 12236899999 6677888877765 4677767766543
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=96.64 E-value=0.0039 Score=58.22 Aligned_cols=130 Identities=17% Similarity=0.168 Sum_probs=84.5
Q ss_pred HHhhhCCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHH-
Q psy16545 246 IEQFTGKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKS- 315 (600)
Q Consensus 246 ~~~l~~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~- 315 (600)
+.+..+..+.++.+|+++++++.++++. .++|++||.|+...... +.++....++.|+.++..+.+++..
T Consensus 53 ~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 132 (260)
T d1h5qa_ 53 VGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKL 132 (260)
T ss_dssp HHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccc
Confidence 3344467789999999999998887754 26999999998754322 2245567789999998888776543
Q ss_pred ---c-CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 316 ---H-GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 316 ---~-~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
. +-.+++..||...+....... ...+....|+.+| ...+.+.+.++.+ +|+++..+-|+.
T Consensus 133 m~~~~~~g~i~~~~s~~~~~~~~~~~-----~~~~~~~~Y~asK---aal~~lt~~lA~el~~~gIrvN~I~PG~ 199 (260)
T d1h5qa_ 133 WLQKQQKGSIVVTSSMSSQIINQSSL-----NGSLTQVFYNSSK---AACSNLVKGLAAEWASAGIRVNALSPGY 199 (260)
T ss_dssp HHHHTCCEEEEEECCGGGTSCCEEET-----TEECSCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred ccccccceEEEEeecccccccccccc-----ccCccccchhhhh---hhHHHHHHHHHHHhchhCeEEeecCCCc
Confidence 2 334667777765443211100 0012236799999 5567777777754 456666666554
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.57 E-value=0.0025 Score=60.07 Aligned_cols=79 Identities=15% Similarity=0.103 Sum_probs=59.3
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcccccc----ChHHHHHHHHHHHHHHHHHHHHc--CCC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGESMQ----EPLMYYKNNLIATINLLEVMKSH--GVY 319 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~~~~~--~~~ 319 (600)
+..+.++.+|+++.+++.++++. -++|++||.|+........+ +....+++|+.|+..+.+++... .-.
T Consensus 52 ~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g 131 (275)
T d1wmaa1 52 GLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQG 131 (275)
T ss_dssp TCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred CCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45688999999999988876654 26999999999764333222 33456889999999999988754 124
Q ss_pred EEEEecCccc
Q psy16545 320 QLVFSSSCTV 329 (600)
Q Consensus 320 r~v~~SS~~v 329 (600)
|+|++||...
T Consensus 132 ~ivnisS~~~ 141 (275)
T d1wmaa1 132 RVVNVSSIMS 141 (275)
T ss_dssp EEEEECCHHH
T ss_pred Ccccccccce
Confidence 8999999543
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.57 E-value=0.011 Score=55.33 Aligned_cols=120 Identities=12% Similarity=0.028 Sum_probs=85.5
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHHHc--CCC
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMKSH--GVY 319 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~ 319 (600)
+..+.++.+|+++++++.+.++. .++|+++|.++...... ...+....++.|+.++..+++++..+ .-.
T Consensus 67 g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g 146 (272)
T d1g0oa_ 67 GSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGG 146 (272)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTC
T ss_pred CCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccc
Confidence 56788999999999988887765 26899999998765432 22344567889999999999988864 235
Q ss_pred EEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 320 QLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 320 r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
+.++++|...... ..+...+|+.+| ...+.+++.++.+ +|+++..+.|+.+
T Consensus 147 ~~i~i~s~~~~~~-----------~~~~~~~Y~asK---aal~~ltk~lA~e~~~~gIrVN~I~PG~v 200 (272)
T d1g0oa_ 147 RLILMGSITGQAK-----------AVPKHAVYSGSK---GAIETFARCMAIDMADKKITVNVVAPGGI 200 (272)
T ss_dssp EEEEECCGGGTCS-----------SCSSCHHHHHHH---HHHHHHHHHHHHHHGGGTCEEEEEEECCB
T ss_pred ccccccccccccc-----------cccchhhHHHHH---HHHHHHHHHHHHHhchhCeEEEEEccCCc
Confidence 7788777542211 012236799999 5677888877765 4777777776654
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.33 E-value=0.0056 Score=56.09 Aligned_cols=114 Identities=16% Similarity=0.100 Sum_probs=75.6
Q ss_pred ceeEEEeecCChhhHHHHhhcC-CccEEEEcccccCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCCCEEEE
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAKH-DIDCVIHFAAVKAVGE----SMQEPLMYYKNNLIATINLLEVMK----SHGVYQLVF 323 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~----~~~~~r~v~ 323 (600)
..+++.+|+++. ++.++++. ++|++||.|+...... +.++....+++|+.++..+.+++. +.+..++|+
T Consensus 45 ~~~~~~~Dv~~~--~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~ 122 (234)
T d1o5ia_ 45 GHRYVVCDLRKD--LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVA 122 (234)
T ss_dssp CSEEEECCTTTC--HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCcEEEcchHHH--HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccc
Confidence 346788999764 44444443 5999999998654322 223455678899998877777664 345568999
Q ss_pred ecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 324 SSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 324 ~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
+||....... +....|+.+| ...+.+.+.++.+ +|+++-.+.|+.
T Consensus 123 i~S~~~~~~~------------~~~~~Y~asK---aal~~ltk~lA~ela~~gIrVN~I~PG~ 170 (234)
T d1o5ia_ 123 ITSFSVISPI------------ENLYTSNSAR---MALTGFLKTLSFEVAPYGITVNCVAPGW 170 (234)
T ss_dssp ECCGGGTSCC------------TTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred cccccccccc------------cccccchhHH---HHHHHHHHHHHHHhcccCeEEeecccCc
Confidence 9997654321 2236799999 5577777777765 356666666543
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.13 E-value=0.012 Score=54.11 Aligned_cols=118 Identities=10% Similarity=0.043 Sum_probs=82.2
Q ss_pred CceeEEEeecCChhhHHHHhhcC-CccEEEEcccccCcccc----ccChHHHHHHHHHHHHHHHHHHHH----cCCCEEE
Q psy16545 252 KKVDFYSCDLVDKNRLGEIFAKH-DIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMKS----HGVYQLV 322 (600)
Q Consensus 252 ~~v~~i~~Dl~~~~~l~~~l~~~-~~d~VihlAa~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~r~v 322 (600)
.+++....|+...+..+...+.. ++|++||+|+....... .++....+++|+.++..+.+++.. .+-.++|
T Consensus 50 ~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii 129 (245)
T d2ag5a1 50 PGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNII 129 (245)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCceeeeeccccccccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceee
Confidence 45778888998888777766653 68999999998754332 234566788999999888887764 2446999
Q ss_pred EecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeecc
Q psy16545 323 FSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYN 383 (600)
Q Consensus 323 ~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~ 383 (600)
++||...- ..+ .+....|+.+| ...+.+++.++.+. |+++..+.|+.
T Consensus 130 ~isS~~~~----------~~~-~~~~~~Y~~sK---aal~~l~r~lA~e~~~~gIrvN~I~PG~ 179 (245)
T d2ag5a1 130 NMSSVASS----------VKG-VVNRCVYSTTK---AAVIGLTKSVAADFIQQGIRCNCVCPGT 179 (245)
T ss_dssp EECCSBTT----------TBC-CTTBHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEESC
T ss_pred eeechhhc----------cCC-ccchhHHHHHH---HHHHHHHHHHHHHhhhhCcEEEEEeece
Confidence 99985420 001 12247899999 66788888888764 56666666543
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.61 E-value=0.0086 Score=54.83 Aligned_cols=95 Identities=13% Similarity=0.136 Sum_probs=65.5
Q ss_pred CCccEEEEcccccCcccc-----ccChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEecCcccccCCCCCCCCCCCCCCC
Q psy16545 274 HDIDCVIHFAAVKAVGES-----MQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGN 346 (600)
Q Consensus 274 ~~~d~VihlAa~~~~~~~-----~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~ 346 (600)
.++|++||+|+....... .++....++.|+.++.++..++..+ +-.++|++||.+.... .|
T Consensus 70 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~------------~~ 137 (236)
T d1dhra_ 70 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG------------TP 137 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC------------CT
T ss_pred CCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCC------------cc
Confidence 368999999985332221 2334556899999999999888764 2258999999765422 12
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHh-----CCCCeeEeecc
Q psy16545 347 IKNFYNLGTGQGTSVLQLLRTFERVT-----GNKPVPYIFYN 383 (600)
Q Consensus 347 ~~~~Y~~sK~~~~~~E~~~~~~~~~~-----~~~~~~~r~~~ 383 (600)
....|+.|| ...+.+.+.++.+. ++++..+.|+.
T Consensus 138 ~~~~Y~asK---aal~~lt~~la~El~~~~~gI~vn~v~PG~ 176 (236)
T d1dhra_ 138 GMIGYGMAK---GAVHQLCQSLAGKNSGMPSGAAAIAVLPVT 176 (236)
T ss_dssp TBHHHHHHH---HHHHHHHHHHTSTTSSCCTTCEEEEEEESC
T ss_pred CCcccHHHH---HHHHHHHHHHHHHhccCCCcEEEEEEEecc
Confidence 236899999 66888888887643 56666666543
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.61 E-value=0.038 Score=51.40 Aligned_cols=122 Identities=8% Similarity=0.020 Sum_probs=80.1
Q ss_pred hhhCCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcccc----ccChHHHHHHHHHHHHHHHHHHHHc--
Q psy16545 248 QFTGKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGES----MQEPLMYYKNNLIATINLLEVMKSH-- 316 (600)
Q Consensus 248 ~l~~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~~~~~-- 316 (600)
...+..+..+.+|+.+........+. ..+|.+++.|+....... .++....+++|+.++..+..++..+
T Consensus 60 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~ 139 (269)
T d1xu9a_ 60 ELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK 139 (269)
T ss_dssp HHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred hhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHH
Confidence 34456778899999988777665543 258999999887543332 2334566889998888877766532
Q ss_pred -CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH-----hCCCCeeEeeccc
Q psy16545 317 -GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV-----TGNKPVPYIFYNL 384 (600)
Q Consensus 317 -~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~-----~~~~~~~~r~~~~ 384 (600)
+-.++|++||.+.+-. .|....|+.|| ...+.+.+.++.+ .++++..+.|+.+
T Consensus 140 ~~~G~ii~isS~~~~~~------------~p~~~~Y~asK---aal~~~~~~La~El~~~~~~I~V~~v~PG~v 198 (269)
T d1xu9a_ 140 QSNGSIVVVSSLAGKVA------------YPMVAAYSASK---FALDGFFSSIRKEYSVSRVNVSITLCVLGLI 198 (269)
T ss_dssp HHTCEEEEEEEGGGTSC------------CTTCHHHHHHH---HHHHHHHHHHHHHHHHHTCCCEEEEEEECCB
T ss_pred hcCCcceEeccchhcCC------------CCCchHHHHHH---HHHHHHHHHHHHHhhhcCCCEEEEEEecCcC
Confidence 2358999999764421 12247899999 5566666666644 2455556665543
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=95.35 E-value=0.014 Score=53.20 Aligned_cols=84 Identities=14% Similarity=0.141 Sum_probs=59.1
Q ss_pred CCccEEEEcccccCcccc-c----cChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEecCcccccCCCCCCCCCCCCCCC
Q psy16545 274 HDIDCVIHFAAVKAVGES-M----QEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSSSCTVYGEPQFLPITEDHPTGN 346 (600)
Q Consensus 274 ~~~d~VihlAa~~~~~~~-~----~~~~~~~~~Nv~gt~~ll~~~~~~--~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~ 346 (600)
.++|++||.|+....... . +.....+++|+.++..+..++..+ +-.++|++||.+.+... |
T Consensus 70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~------------~ 137 (235)
T d1ooea_ 70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT------------P 137 (235)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------------T
T ss_pred CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc------------c
Confidence 368999999986332221 1 233456889999999888888764 12589999997654321 2
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHh
Q psy16545 347 IKNFYNLGTGQGTSVLQLLRTFERVT 372 (600)
Q Consensus 347 ~~~~Y~~sK~~~~~~E~~~~~~~~~~ 372 (600)
...+|+.|| ...+.+.+.++.+.
T Consensus 138 ~~~~Y~asK---aal~~l~~~la~e~ 160 (235)
T d1ooea_ 138 SMIGYGMAK---AAVHHLTSSLAAKD 160 (235)
T ss_dssp TBHHHHHHH---HHHHHHHHHHHSTT
T ss_pred cccchHHHH---HHHHHHHHHHHHHh
Confidence 247899999 66889999888654
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=95.01 E-value=0.077 Score=49.80 Aligned_cols=125 Identities=13% Similarity=0.005 Sum_probs=80.7
Q ss_pred HHHhhhCCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccccc----cChHHHHHHHHHHHHHHHHHHH-
Q psy16545 245 AIEQFTGKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGESM----QEPLMYYKNNLIATINLLEVMK- 314 (600)
Q Consensus 245 ~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~~~- 314 (600)
.+....+..+.++.+|+++.+.+.+.+.. .++|+++|+|+........ .+....+..|..+...+...+.
T Consensus 68 ~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 147 (294)
T d1w6ua_ 68 QISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGK 147 (294)
T ss_dssp HHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhc
Confidence 34444567788999999999988776554 3699999999976543322 2334556777777766655443
Q ss_pred ---Hc-CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeeccc
Q psy16545 315 ---SH-GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYNL 384 (600)
Q Consensus 315 ---~~-~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~~ 384 (600)
.. +-..++..||....... +....|+.+| ...+.+++.++.. +|+++-.+-|+.+
T Consensus 148 ~~~~~~~~~~i~~~ss~~~~~~~------------~~~~~YsasK---aal~~ltk~lA~ela~~gIrVN~I~PG~i 209 (294)
T d1w6ua_ 148 QLIKAQKGAAFLSITTIYAETGS------------GFVVPSASAK---AGVEAMSKSLAAEWGKYGMRFNVIQPGPI 209 (294)
T ss_dssp HHHHTTCCEEEEEECCTHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred ccccccccccccccccchhhhcc------------cccchHHHHH---HHHHHHHHHHHHHHhHhCeEEEEEccCcc
Confidence 22 23466777775433211 1236799999 6678888888765 4566666666543
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=95.01 E-value=0.13 Score=47.61 Aligned_cols=112 Identities=13% Similarity=0.010 Sum_probs=68.6
Q ss_pred eEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccccccC------------------hHHHHHHHHHHHHHHHH
Q psy16545 255 DFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGESMQE------------------PLMYYKNNLIATINLLE 311 (600)
Q Consensus 255 ~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~~~~------------------~~~~~~~Nv~gt~~ll~ 311 (600)
....+|+++.+++.++++. -++|++||.|+.......... ....+..|+.++..+.+
T Consensus 73 ~~~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 152 (284)
T d1e7wa_ 73 ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK 152 (284)
T ss_dssp ---CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred ccccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeec
Confidence 3445678888888776653 269999999997643221111 11356788888888887
Q ss_pred HHHHc----------CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCee
Q psy16545 312 VMKSH----------GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVP 378 (600)
Q Consensus 312 ~~~~~----------~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~ 378 (600)
++.+. +..++|.+||...... .+....|+.+| ...+.+.+.++.+. |+++-.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~------------~~~~~~Y~asK---aal~~lt~~lA~el~~~gIrvN~ 217 (284)
T d1e7wa_ 153 AFAHRVAGTPAKHRGTNYSIINMVDAMTNQP------------LLGYTIYTMAK---GALEGLTRSAALELAPLQIRVNG 217 (284)
T ss_dssp HHHHHHHTSCGGGSCSCEEEEEECCTTTTSC------------CTTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEE
T ss_pred cccchhhhhHHHhcCCCCcccccccccccCC------------ccceeeecccc---ccchhhhHHHHHHhCCccccccc
Confidence 75431 1236777777553321 12236899999 66788888887654 455444
Q ss_pred Eee
Q psy16545 379 YIF 381 (600)
Q Consensus 379 ~r~ 381 (600)
+-|
T Consensus 218 I~P 220 (284)
T d1e7wa_ 218 VGP 220 (284)
T ss_dssp EEE
T ss_pred ccc
Confidence 443
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.19 E-value=0.15 Score=46.34 Aligned_cols=125 Identities=12% Similarity=0.170 Sum_probs=81.1
Q ss_pred HHHHhhhCCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccc----------cccChHHHHHHHHHHHHH
Q psy16545 244 RAIEQFTGKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGE----------SMQEPLMYYKNNLIATIN 308 (600)
Q Consensus 244 ~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~----------~~~~~~~~~~~Nv~gt~~ 308 (600)
....+..+........|+.+...++..... ...|.+++.+....... ..+.....+++|+.++.+
T Consensus 43 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~ 122 (248)
T d2o23a1 43 EAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 122 (248)
T ss_dssp HHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHhCCCcccccccccccccccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHH
Confidence 333344466778888999887766554432 35788887765432221 112445678999999999
Q ss_pred HHHHHHHc----------CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCC
Q psy16545 309 LLEVMKSH----------GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNK 375 (600)
Q Consensus 309 ll~~~~~~----------~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~ 375 (600)
+..++..+ +-.++|++||...+-. .|....|+.+| ...+.+.+.++.+. +++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~------------~~~~~~Y~asK---aal~~lt~~la~e~~~~gIr 187 (248)
T d2o23a1 123 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG------------QVGQAAYSASK---GGIVGMTLPIARDLAPIGIR 187 (248)
T ss_dssp HHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC------------CTTCHHHHHHH---HHHHHHHHHHHHHHGGGTEE
T ss_pred HHHHhHHHHHHhhhhccCCceEEEEecchhhccC------------CCCchHHHHHH---HHHHHHHHHHHHHhcccCcc
Confidence 99988643 2237999999775532 12247899999 56778888887664 555
Q ss_pred CeeEeecc
Q psy16545 376 PVPYIFYN 383 (600)
Q Consensus 376 ~~~~r~~~ 383 (600)
+..+-|+.
T Consensus 188 vN~I~PG~ 195 (248)
T d2o23a1 188 VMTIAPGL 195 (248)
T ss_dssp EEEEEECC
T ss_pred eeeeccCc
Confidence 55555543
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=94.11 E-value=0.04 Score=52.87 Aligned_cols=112 Identities=9% Similarity=-0.019 Sum_probs=72.5
Q ss_pred eecCChhhHHHHhhc-----CCccEEEEcccccCc------cccccChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEec
Q psy16545 259 CDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAV------GESMQEPLMYYKNNLIATINLLEVMKSH--GVYQLVFSS 325 (600)
Q Consensus 259 ~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~r~v~~S 325 (600)
.|+.+...++++++. -++|++||.|+.... ....++....+++|+.++..+.+++..+ .-.++|.+|
T Consensus 92 ~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsIv~is 171 (329)
T d1uh5a_ 92 YNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLT 171 (329)
T ss_dssp HHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred hhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccccccccce
Confidence 355555544444332 268999999886432 1123455677889999999998888765 224899998
Q ss_pred CcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHH----HhCCCCeeEeeccc
Q psy16545 326 SCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFER----VTGNKPVPYIFYNL 384 (600)
Q Consensus 326 S~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~----~~~~~~~~~r~~~~ 384 (600)
|.+...... .. ...|+.+| ...+.+++.++. .+++++-.+.|+.+
T Consensus 172 s~~~~~~~p----------~y-~~~y~asK---aal~~ltr~lA~Ela~~~gIRVNaI~PG~i 220 (329)
T d1uh5a_ 172 YHASQKVVP----------GY-GGGMSSAK---AALESDTRVLAYHLGRNYNIRINTISAGPL 220 (329)
T ss_dssp CGGGTSCCT----------TC-TTTHHHHH---HHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred eehhccccc----------cc-chhhhhhh---ccccccchhhHHHHhcccCcEEEEEecCcc
Confidence 866432111 11 25799999 556777766663 46888888887643
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=92.98 E-value=0.17 Score=46.37 Aligned_cols=126 Identities=9% Similarity=0.041 Sum_probs=75.4
Q ss_pred HHHHhhhCCceeEEEeecCChhhHHHHhhc--------CCccEEEEcccccCccc---------cccChHHHHHHHHHHH
Q psy16545 244 RAIEQFTGKKVDFYSCDLVDKNRLGEIFAK--------HDIDCVIHFAAVKAVGE---------SMQEPLMYYKNNLIAT 306 (600)
Q Consensus 244 ~~~~~l~~~~v~~i~~Dl~~~~~l~~~l~~--------~~~d~VihlAa~~~~~~---------~~~~~~~~~~~Nv~gt 306 (600)
..+.+..+.....+.+|+.+.+++..+++. ..+|+++|.|+...... .+......+..|....
T Consensus 47 ~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (268)
T d2h7ma1 47 QRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSY 126 (268)
T ss_dssp HHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHH
T ss_pred HHHHHHcCCceeeEeeecccccccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHH
Confidence 334455566778899999998776665443 14799999998653221 1122233455666666
Q ss_pred HHHHHHHHHcC-CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeec
Q psy16545 307 INLLEVMKSHG-VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFY 382 (600)
Q Consensus 307 ~~ll~~~~~~~-~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~ 382 (600)
......+.... ....+..+|...... .|....|+.+| ...+.+++.++.+. ++++..+.|+
T Consensus 127 ~~~~~~~~~~~~~~~~i~~~s~~~~~~------------~p~~~~y~~sK---~a~~~ltr~lA~e~~~~gIrVN~V~PG 191 (268)
T d2h7ma1 127 ASMAKALLPIMNPGGSIVGMDFDPSRA------------MPAYNWMTVAK---SALESVNRFVAREAGKYGVRSNLVAAG 191 (268)
T ss_dssp HHHHHHHGGGEEEEEEEEEEECCCSSC------------CTTTHHHHHHH---HHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHHhhhccccccccccccccccc------------Ccccchhhccc---cchhhccccchhhhhccCCcceEEecC
Confidence 66666655442 223444444332211 12246899999 56788888887653 5666667665
Q ss_pred cc
Q psy16545 383 NL 384 (600)
Q Consensus 383 ~~ 384 (600)
.+
T Consensus 192 ~v 193 (268)
T d2h7ma1 192 PI 193 (268)
T ss_dssp CC
T ss_pred CC
Confidence 43
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=92.43 E-value=0.3 Score=40.25 Aligned_cols=105 Identities=12% Similarity=-0.017 Sum_probs=62.3
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccccc-----ccccChHHhhh---HHhhhhcccccccCCCCEEEEcCcccCcc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARRE-----GDIVSMYANTD---LAQKELGWSARCTHDIDCVIHFAAVKAVG 80 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~-----~Dl~~~~~~~~---~~~~~~~~~~~~~~~~d~Vih~A~~~~~~ 80 (600)
|.|++|.+|..++-.....+---+.+..|+++ .|+.+...... .....+..+.+. +.|+||.+||....
T Consensus 5 IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~--~aDivVitag~~~~- 81 (144)
T d1mlda1 5 VLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLK--GCDVVVIPAGVPRK- 81 (144)
T ss_dssp EETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHT--TCSEEEECCSCCCC-
T ss_pred EECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhC--CCCEEEECCCcCCC-
Confidence 67888999999976554333212455444432 12221110000 000000011233 79999999997532
Q ss_pred cCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecC
Q psy16545 81 ESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSS 117 (600)
Q Consensus 81 ~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS 117 (600)
...+....++.|+...+.+++.+.+.+.+-++.+-|
T Consensus 82 -~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt 117 (144)
T d1mlda1 82 -PGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (144)
T ss_dssp -TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 234566789999999999999999987666666665
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=90.07 E-value=6 Score=35.10 Aligned_cols=123 Identities=10% Similarity=-0.012 Sum_probs=67.3
Q ss_pred HHHhhhCCceeEEEeecCChh----hHHHHhh----c-CCccEEEEcccccCccccc---------------cChHHHHH
Q psy16545 245 AIEQFTGKKVDFYSCDLVDKN----RLGEIFA----K-HDIDCVIHFAAVKAVGESM---------------QEPLMYYK 300 (600)
Q Consensus 245 ~~~~l~~~~v~~i~~Dl~~~~----~l~~~l~----~-~~~d~VihlAa~~~~~~~~---------------~~~~~~~~ 300 (600)
++....+....++..|+.+.. .+.++++ + .++|++||.|+........ ......+.
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (266)
T d1mxha_ 45 ELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFG 124 (266)
T ss_dssp HHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHH
T ss_pred HHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccc
Confidence 344444566677776665432 2323222 1 2699999999975432211 11223445
Q ss_pred HHHHHHHHHHHHHHHcC---------CCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH
Q psy16545 301 NNLIATINLLEVMKSHG---------VYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV 371 (600)
Q Consensus 301 ~Nv~gt~~ll~~~~~~~---------~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~ 371 (600)
.|..+...........- ...++.+||...... .|....|+.|| ...+.+.+.++..
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~Y~asK---aal~~lt~~lA~e 189 (266)
T d1mxha_ 125 SNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLP------------LPGFCVYTMAK---HALGGLTRAAALE 189 (266)
T ss_dssp HHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGGSC------------CTTCHHHHHHH---HHHHHHHHHHHHH
T ss_pred cccccccchhhhhccccccccccccccccchhhhhcccccc------------CcchhhhhhhH---HHHhhhHHHHHHH
Confidence 55555555555444321 124555666443321 12247899999 6677888877765
Q ss_pred ---hCCCCeeEeec
Q psy16545 372 ---TGNKPVPYIFY 382 (600)
Q Consensus 372 ---~~~~~~~~r~~ 382 (600)
+|+++..+.|+
T Consensus 190 ~~~~gIrVN~I~PG 203 (266)
T d1mxha_ 190 LAPRHIRVNAVAPG 203 (266)
T ss_dssp HGGGTEEEEEEEES
T ss_pred hCccCcEEEEeccC
Confidence 45666666554
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=89.74 E-value=0.75 Score=41.56 Aligned_cols=117 Identities=12% Similarity=0.052 Sum_probs=74.8
Q ss_pred ceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCccccc---------cChHHHHHHHHHHHHHHHHHHHHc--
Q psy16545 253 KVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGESM---------QEPLMYYKNNLIATINLLEVMKSH-- 316 (600)
Q Consensus 253 ~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~~---------~~~~~~~~~Nv~gt~~ll~~~~~~-- 316 (600)
.......|+.+.......+.. ..+|.++|.|+........ +.....+..|+.+...+..++...
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (258)
T d1qsga_ 56 SDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN 135 (258)
T ss_dssp CCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred CcceeecccchHHHHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 456778888887776665543 2579999998775433311 112334566777777777777654
Q ss_pred CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHh---CCCCeeEeeccc
Q psy16545 317 GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERVT---GNKPVPYIFYNL 384 (600)
Q Consensus 317 ~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~~---~~~~~~~r~~~~ 384 (600)
+-+.+|++||...... .|....|+.+| ...+.+++.++.+. ++++..+.|+.+
T Consensus 136 ~~~~Ii~iss~~~~~~------------~~~~~~Y~~sK---aal~~ltr~lA~el~~~gIrVN~I~PG~i 191 (258)
T d1qsga_ 136 PGSALLTLSYLGAERA------------IPNYNVMGLAK---ASLEANVRYMANAMGPEGVRVNAISAGPI 191 (258)
T ss_dssp EEEEEEEEECGGGTSB------------CTTTTHHHHHH---HHHHHHHHHHHHHHTTTTEEEEEEEECCC
T ss_pred CCcEEEEecchhhccC------------CCCcHHHHHHH---HHHHHHHHHHHHHhCccCceeeccccccc
Confidence 2246888888653211 12236799999 66788888888765 466666776553
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=87.41 E-value=1.1 Score=36.74 Aligned_cols=103 Identities=13% Similarity=-0.007 Sum_probs=59.9
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccccc---------ccccChHHhhh----H-HhhhhcccccccCCCCEEEEcC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARRE---------GDIVSMYANTD----L-AQKELGWSARCTHDIDCVIHFA 74 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~---------~Dl~~~~~~~~----~-~~~~~~~~~~~~~~~d~Vih~A 74 (600)
|.|++|.+|..++-.....+---+.+..|+++ .|+.+...... . ....++++.+. +.|+||-+|
T Consensus 5 IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~--~aDvVVitA 82 (145)
T d1hyea1 5 IIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIID--ESDVVIITS 82 (145)
T ss_dssp EETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGT--TCSEEEECC
T ss_pred EECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhc--cceEEEEec
Confidence 67999999999977554433212455444432 12221110000 0 00001222333 799999999
Q ss_pred cccCcccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEe
Q psy16545 75 AVKAVGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFS 115 (600)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~ 115 (600)
|.... ...+....++.|..-...+++...+.+.+.++.+
T Consensus 83 G~~~~--~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV 121 (145)
T d1hyea1 83 GVPRK--EGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI 121 (145)
T ss_dssp SCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred ccccC--CCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence 97532 2245667899999999999999988765555544
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=85.05 E-value=1.2 Score=36.40 Aligned_cols=105 Identities=12% Similarity=-0.016 Sum_probs=59.5
Q ss_pred CCCCcchHHHHHHHhhhcc-CCCccEEeccccc------ccccChHHhhhH--HhhhhcccccccCCCCEEEEcCcccCc
Q psy16545 9 GTGQGTSVLQLLRTFERVT-GKPVPYIVEARRE------GDIVSMYANTDL--AQKELGWSARCTHDIDCVIHFAAVKAV 79 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~-~~~~~~~~~~~~~------~Dl~~~~~~~~~--~~~~~~~~~~~~~~~d~Vih~A~~~~~ 79 (600)
|+|++|++|..++-..... ...-+.+..|+.+ .|+.+....... .....++..+. +.|+||.+||....
T Consensus 5 IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~--~aDvvvitaG~~~k 82 (145)
T d2cmda1 5 VLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALE--GADVVLISAGVRRK 82 (145)
T ss_dssp EETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCHHHHT--TCSEEEECCSCCCC
T ss_pred EEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCccccC--CCCEEEECCCccCC
Confidence 6899999999886543221 2222455334432 122211000000 00001122232 78999999998642
Q ss_pred ccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecC
Q psy16545 80 GESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSS 117 (600)
Q Consensus 80 ~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS 117 (600)
...+....++.|..-.+.+.+.+.+.+.+.++.+-|
T Consensus 83 --~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt 118 (145)
T d2cmda1 83 --PGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT 118 (145)
T ss_dssp --TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred --CCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence 234566789999999999999999886555544444
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=84.18 E-value=2.2 Score=37.55 Aligned_cols=115 Identities=16% Similarity=0.104 Sum_probs=69.1
Q ss_pred eeEEEeecCChhhHHHHhhc----CCccEEEEcccccCccc--------cccChHHHHHHHHHHHHHHHHHHHHc-----
Q psy16545 254 VDFYSCDLVDKNRLGEIFAK----HDIDCVIHFAAVKAVGE--------SMQEPLMYYKNNLIATINLLEVMKSH----- 316 (600)
Q Consensus 254 v~~i~~Dl~~~~~l~~~l~~----~~~d~VihlAa~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~~~~~~----- 316 (600)
.....+|+.+.......... ...+.+++.++...... ........++.|+.+...+...+...
T Consensus 40 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 119 (241)
T d1uaya_ 40 LIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENP 119 (241)
T ss_dssp SEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCC
T ss_pred ceEeeccccchhhhHHHHHhhhccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhh
Confidence 45667787776655554332 23444444443321111 11234466788988888777766532
Q ss_pred -----CCCEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 317 -----GVYQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 317 -----~~~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
+-.++|++||...+-.. |....|+.+| ...+.+.+.++.+ +|+++..+-|+.
T Consensus 120 ~~~~~~~G~Ii~isS~~~~~~~------------~~~~~Y~asK---aal~~lt~~lA~ela~~gIrVN~V~PG~ 179 (241)
T d1uaya_ 120 PDAEGQRGVIVNTASVAAFEGQ------------IGQAAYAASK---GGVVALTLPAARELAGWGIRVVTVAPGL 179 (241)
T ss_dssp CCTTSCSEEEEEECCTHHHHCC------------TTCHHHHHHH---HHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred hhcccCceeeeeecchhhccCC------------CCchhhHHHH---HHHHHHHHHHHHHHhhcCCceeeecCCc
Confidence 22489999997654221 2247899999 5677888888765 456666666554
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=83.84 E-value=1.4 Score=40.58 Aligned_cols=96 Identities=10% Similarity=-0.112 Sum_probs=59.9
Q ss_pred CccEEEEcccccCc-c-----ccccChHHHHHHHHHHHHHHHHHHHHcCC--CEEEEecCcccccCCCCCCCCCCCCCCC
Q psy16545 275 DIDCVIHFAAVKAV-G-----ESMQEPLMYYKNNLIATINLLEVMKSHGV--YQLVFSSSCTVYGEPQFLPITEDHPTGN 346 (600)
Q Consensus 275 ~~d~VihlAa~~~~-~-----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~--~r~v~~SS~~vYg~~~~~~~~E~~~~~~ 346 (600)
++|++||.|+.... . .+.++....+++|+.+...+..++..... .+.+.++|.+...... +
T Consensus 119 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----------~ 187 (297)
T d1d7oa_ 119 SIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIP-----------G 187 (297)
T ss_dssp CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT-----------T
T ss_pred CCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcCCcceeeeehhhccccc-----------c
Confidence 68999999986421 1 12334567788999999999998876532 2455555544322111 1
Q ss_pred CCcccccchhhHHHHHHHH----HHHHHHhCCCCeeEeeccc
Q psy16545 347 IKNFYNLGTGQGTSVLQLL----RTFERVTGNKPVPYIFYNL 384 (600)
Q Consensus 347 ~~~~Y~~sK~~~~~~E~~~----~~~~~~~~~~~~~~r~~~~ 384 (600)
....|+.+|. ..+.+. ..+...+++++..+.|+.+
T Consensus 188 ~~~~y~~aKa---a~~~l~~~~a~e~~~~~gIrvN~I~PG~i 226 (297)
T d1d7oa_ 188 YGGGMSSAKA---ALESDTRVLAFEAGRKQNIRVNTISAGPL 226 (297)
T ss_dssp CTTTHHHHHH---HHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred cccceecccc---cccccccccchhccccceEEecccccccc
Confidence 2367999994 344444 3344456888888887654
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=83.54 E-value=1.6 Score=35.51 Aligned_cols=104 Identities=12% Similarity=-0.044 Sum_probs=61.6
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccccc-------ccccChHHhhhHHh--hhhcccccccCCCCEEEEcCcccCc
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARRE-------GDIVSMYANTDLAQ--KELGWSARCTHDIDCVIHFAAVKAV 79 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~-------~Dl~~~~~~~~~~~--~~~~~~~~~~~~~d~Vih~A~~~~~ 79 (600)
|.|+ |.+|..++-...+.+---+++..|+++ .|+.+......... ...+++.+. +.|+||-+||....
T Consensus 6 IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~--daDvVVitaG~~~~ 82 (143)
T d1llda1 6 VIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICR--DADMVVITAGPRQK 82 (143)
T ss_dssp EECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGT--TCSEEEECCCCCCC
T ss_pred EECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHhh--CCcEEEEecccccC
Confidence 5686 889999876544433323566556553 12322111110000 011222333 78999999997642
Q ss_pred ccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecC
Q psy16545 80 GESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSS 117 (600)
Q Consensus 80 ~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS 117 (600)
......+.++.|..-...+++.+.+.+.+.++.+-|
T Consensus 83 --~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt 118 (143)
T d1llda1 83 --PGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT 118 (143)
T ss_dssp --TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred --CCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 234566788999999999999998887655555544
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=83.47 E-value=1 Score=36.89 Aligned_cols=105 Identities=14% Similarity=0.068 Sum_probs=57.6
Q ss_pred cCCCCcchHHHHHHHhhhccCCCccEEeccccc-------ccccChHHhhhHHh-hhhcccccccCCCCEEEEcCcccCc
Q psy16545 8 LGTGQGTSVLQLLRTFERVTGKPVPYIVEARRE-------GDIVSMYANTDLAQ-KELGWSARCTHDIDCVIHFAAVKAV 79 (600)
Q Consensus 8 ~vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~-------~Dl~~~~~~~~~~~-~~~~~~~~~~~~~d~Vih~A~~~~~ 79 (600)
.|.|+ |++|..++-.....+-.-+++..|+++ .|+.+......-.. ...+++.+ .++|+||.+||....
T Consensus 9 ~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~~--~~adivvitag~~~~ 85 (146)
T d1ez4a1 9 VLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDC--KDADLVVITAGAPQK 85 (146)
T ss_dssp EEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGG--TTCSEEEECCCC---
T ss_pred EEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHHh--ccccEEEEecccccC
Confidence 46785 889999876544433223566556553 23322111000000 00122223 279999999987643
Q ss_pred ccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecC
Q psy16545 80 GESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSS 117 (600)
Q Consensus 80 ~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS 117 (600)
. ..+.....+.|+.-...+++.+.+.+.+.++.+-|
T Consensus 86 ~--g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 86 P--GESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred C--CCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 2 23455578889999999999999987666666665
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=81.61 E-value=2.4 Score=38.32 Aligned_cols=118 Identities=11% Similarity=0.040 Sum_probs=68.0
Q ss_pred CCceeEEEeecCChhhHHHHhhc-----CCccEEEEcccccCcccccc-----ChHHHHHHHHH---HHHHHHHHHHHc-
Q psy16545 251 GKKVDFYSCDLVDKNRLGEIFAK-----HDIDCVIHFAAVKAVGESMQ-----EPLMYYKNNLI---ATINLLEVMKSH- 316 (600)
Q Consensus 251 ~~~v~~i~~Dl~~~~~l~~~l~~-----~~~d~VihlAa~~~~~~~~~-----~~~~~~~~Nv~---gt~~ll~~~~~~- 316 (600)
+....+...|+++.....+++.. -.+|+++|.++......... ........+.. +...+.....+.
T Consensus 54 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (274)
T d2pd4a1 54 LNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL 133 (274)
T ss_dssp TTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred CCceeEeeecccchhhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc
Confidence 44567889999998887776643 26899999998764432221 12222222222 233333333332
Q ss_pred CC-CEEEEecCcccccCCCCCCCCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---hCCCCeeEeecc
Q psy16545 317 GV-YQLVFSSSCTVYGEPQFLPITEDHPTGNIKNFYNLGTGQGTSVLQLLRTFERV---TGNKPVPYIFYN 383 (600)
Q Consensus 317 ~~-~r~v~~SS~~vYg~~~~~~~~E~~~~~~~~~~Y~~sK~~~~~~E~~~~~~~~~---~~~~~~~~r~~~ 383 (600)
+. ..++..||.+..+.. +....|+.+| ...+.+++.++.+ +|+++..+.|+.
T Consensus 134 ~~~~~i~~~s~~~~~~~~------------~~~~~y~asK---~al~~ltr~lA~e~~~~GIrvN~I~PG~ 189 (274)
T d2pd4a1 134 NNGASVLTLSYLGSTKYM------------AHYNVMGLAK---AALESAVRYLAVDLGKHHIRVNALSAGP 189 (274)
T ss_dssp EEEEEEEEEECGGGTSBC------------TTCHHHHHHH---HHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred ccCcceeeeccccccccc------------ccchhhhHHH---HHHHHHHHhhHHHhcCcCceecccccCc
Confidence 22 245556665544321 1236799999 5677877777765 356666666654
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=80.74 E-value=2.2 Score=34.56 Aligned_cols=105 Identities=11% Similarity=0.037 Sum_probs=61.1
Q ss_pred CCCCcchHHHHHHHhhhccCCCccEEeccccc---------ccccChHHhhhHHh-hhhcccccccCCCCEEEEcCcccC
Q psy16545 9 GTGQGTSVLQLLRTFERVTGKPVPYIVEARRE---------GDIVSMYANTDLAQ-KELGWSARCTHDIDCVIHFAAVKA 78 (600)
Q Consensus 9 vtG~~g~~~~~l~~~~~~~~~~~~~~~~~~~~---------~Dl~~~~~~~~~~~-~~~~~~~~~~~~~d~Vih~A~~~~ 78 (600)
|.|++|++|..++-.....+---+.+..|+.. .|+.+......-.. ...+++.+ .+.|+||-+||...
T Consensus 5 IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~~--~~aDiVvitaG~~~ 82 (142)
T d1o6za1 5 VVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDT--AGSDVVVITAGIPR 82 (142)
T ss_dssp EETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGG--TTCSEEEECCCCCC
T ss_pred EECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHHh--hhcCEEEEeccccc
Confidence 67899999999976554433222566444321 12221100000000 00111222 37999999999754
Q ss_pred cccCCCChhhhHHhHHHHHHHHHHHHHHcCCCeEEEecC
Q psy16545 79 VGESMQEPLMYYKNNLIATINLLEVMKSHGVYQLVFSSS 117 (600)
Q Consensus 79 ~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~r~I~~SS 117 (600)
. ...+..+.++.|..-.+.+++...+.+.+-++.+-|
T Consensus 83 ~--~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt 119 (142)
T d1o6za1 83 Q--PGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119 (142)
T ss_dssp C--TTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred c--cCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence 2 234667799999999999999999886555554444
|