Psyllid ID: psy16585


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
MLIGRTLDEALQLYMTLSTDLFTQNKLSGYTSMLLRHAYYDTDKFETFLREYIGETPMIQTNRQRKCPKLSVVSTVVNHDKVWPYVFRNYCIPYERKSQYMGDHKYAMWQAVRASSAAPSIFDEFHLDGLVHQDGGMTVNNPAAVAIHEATLLWPGAPLQCIVSCGTGRTLPKLNATPYSHDTQSASDSAQTAGSSLWHKMVKILESATDTEGVHTCLSDLLPQGVYYRFNPYLSEVPDLDETRPEKLAQLRLDTDIYIRKNEAKFQAATQCLLREKSLVAKMSDYVTRRAYVWNAHL
ccccccHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccEEEEEEEEEccccccEEEEccccccccccccccccccHHHHHHHHHcccccccccEEEcccEEEEccccccccHHHHHHHHHHHcccccccEEEEEccccccccccccccccccccccHHHHHHcHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccc
ccccccHHHHHHHHHHHHHHHHccccEEEEEEEEEccccccHHHHHHHHHHHHcccccHHHcccccccEEEEEEEEEccccccEEEEEccccccccccccccccccHHHHHHHHccccccccccccccccccccccEEcccHHHHHHHHHHHHccccccEEEEEEccccccccccccccEEcccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHccccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccc
MLIGRTLDEALQLYMTLSTDLFTQNKLSGYTSMLLRHAYYDTDKFETFLREYigetpmiqtnrqrkcpklsVVSTVvnhdkvwpyvfrnycipyerksqymgdhKYAMWQAVrassaapsifdefhldglvhqdggmtvnnpaAVAIHEatllwpgaplqcivscgtgrtlpklnatpyshdtqsasdsaqTAGSSLWHKMVKILESatdtegvhtclsdllpqgvyyrfnpylsevpdldetrpeKLAQLRLDTDIYIRKNEAKFQAATQCLLREKSLVAKMSDYVTRRAYVWNAHL
MLIGRTLDEALQLYMTLSTDLFTQNKLSGYTSMLLRHAYYDTDKFETFLREYIGEtpmiqtnrqrkcpKLSVVStvvnhdkvwpyvFRNYCIPYERKSQYMGDHKYAMWQAVRASSAAPSIFDEFHLDGLVHQDGGMTVNNPAAVAIHEATLLWPGAPLQCIVSCGTGRTLPKLNATPYSHDTQSASDSAQTAGSSLWHKMVKILESATDTEGVHTCLSDLLPQGVYYRFNPYLsevpdldetrPEKLAQLRLDTDIYIRKNEAKFQAATQCLLREKSLVAKMSDYVTRRAYVWNAHL
MLIGRTLDEALQLYMTLSTDLFTQNKLSGYTSMLLRHAYYDTDKFETFLREYIGETPMIQTNRQRKCPKLSVVSTVVNHDKVWPYVFRNYCIPYERKSQYMGDHKYAMWQAVRASSAAPSIFDEFHLDGLVHQDGGMTVNNPAAVAIHEATLLWPGAPLQCIVSCGTGRTLPKLNATPYSHDTQSASDSAQTAGSSLWHKMVKILESATDTEGVHTCLSDLLPQGVYYRFNPYLSEVPDLDETRPEKLAQLRLDTDIYIRKNEAKFQAATQCLLREKSLVAKMSDYVTRRAYVWNAHL
*****TLDEALQLYMTLSTDLFTQNKLSGYTSMLLRHAYYDTDKFETFLREYIGETPMIQTNRQRKCPKLSVVSTVVNHDKVWPYVFRNYCIPYERKSQYMGDHKYAMWQAVRASSAAPSIFDEFHLDGLVHQDGGMTVNNPAAVAIHEATLLWPGAPLQCIVSCGTGRTLPK***********************LWHKMVKILESATDTEGVHTCLSDLLPQGVYYRFNPYLSEVPDLDETRPEKLAQLRLDTDIYIRKNEAKFQAATQCLLREKSLVAKMSDYVTRRAYVWN***
MLIGRTLDEALQLYMTLSTDLFTQNKLSGYTSMLLRHAYYDTDKFETFLREYIGETPMIQTNRQRKCPKLSVVSTVVNHDKVWPYVFRNYCIPYERKSQYMGDHKYAMWQAVRASSAAPSIFDEFHLDGLVHQDGGMTVNNPAAVAIHEATLLWPGAPLQCIVSCGTGRTLPKLNATPYSHDTQSASDSAQTAGSSLWHKMVKILESATDTEGVHTCLSDLLPQGVYYRFNPYLSEVPDLDETRPEKLAQLRLDTDIYIRKNEAKFQAATQCLLR***********VTRRAYVWNAHL
MLIGRTLDEALQLYMTLSTDLFTQNKLSGYTSMLLRHAYYDTDKFETFLREYIGETPMIQTNRQRKCPKLSVVSTVVNHDKVWPYVFRNYCIPYERKSQYMGDHKYAMWQAVRASSAAPSIFDEFHLDGLVHQDGGMTVNNPAAVAIHEATLLWPGAPLQCIVSCGTGRTLPKLNATP*****************SLWHKMVKILESATDTEGVHTCLSDLLPQGVYYRFNPYLSEVPDLDETRPEKLAQLRLDTDIYIRKNEAKFQAATQCLLREKSLVAKMSDYVTRRAYVWNAHL
***GRTLDEALQLYMTLSTDLFTQNKLSGYTSMLLRHAYYDTDKFETFLREYIGETPMIQTNRQRKCPKLSVVSTVVNHDKVWPYVFRNYCIPYERKSQYMGDHKYAMWQAVRASSAAPSIFDEFHLDGLVHQDGGMTVNNPAAVAIHEATLLWPGAPLQCIVSCGTGRTLPKLNATPYSHDTQSASDSAQTAGSSLWHKMVKILESATDTEGVHTCLSDLLPQGVYYRFNPYLSEVPDLDETRPEKLAQLRLDTDIYIRKNEAKFQAATQCLLREKSLVAKMSDYVTRRAYVWNAHL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLIGRTLDEALQLYMTLSTDLFTQNKLSGYTSMLLRHAYYDTDKFETFLREYIGETPMIQTNRQRKCPKLSVVSTVVNHDKVWPYVFRNYCIPYERKSQYMGDHKYAMWQAVRASSAAPSIFDEFHLDGLVHQDGGMTVNNPAAVAIHEATLLWPGAPLQCIVSCGTGRTLPKLNATPYSHDTQSASDSAQTAGSSLWHKMVKILESATDTEGVHTCLSDLLPQGVYYRFNPYLSEVPDLDETRPEKLAQLRLDTDIYIRKNEAKFQAATQCLLREKSLVAKMSDYVTRRAYVWNAHL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query298 2.2.26 [Sep-21-2011]
Q5XTS1786 Calcium-independent phosp yes N/A 0.895 0.339 0.443 7e-63
Q8K1N1776 Calcium-independent phosp yes N/A 0.926 0.355 0.419 5e-62
Q9NP80782 Calcium-independent phosp yes N/A 0.892 0.340 0.434 1e-60
O60733806 85/88 kDa calcium-indepen no N/A 0.748 0.276 0.278 4e-09
P97570807 85/88 kDa calcium-indepen yes N/A 0.744 0.275 0.277 1e-08
P97819807 85/88 kDa calcium-indepen no N/A 0.744 0.275 0.273 2e-08
>sp|Q5XTS1|PLPL8_RABIT Calcium-independent phospholipase A2-gamma OS=Oryctolagus cuniculus GN=PNPLA8 PE=1 SV=1 Back     alignment and function desciption
 Score =  240 bits (613), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 125/282 (44%), Positives = 173/282 (61%), Gaps = 15/282 (5%)

Query: 7   LDEALQLYMTLSTDLFTQNKLSGYTSMLLRHAYYDTDKFETFLREYIGETPMIQTNRQRK 66
           LDE  +LY  L +D+F+QN + G   M   HA+YD+  +E  L+E +G   MI+T R   
Sbjct: 503 LDECEELYRKLGSDIFSQNVIVGTVKMSWSHAFYDSQTWEKILKERMGSALMIETARNPM 562

Query: 67  CPKLSVVSTVVNHDKV-WPYVFRNYCIPYERKSQYMGDHKYAMWQAVRASSAAPSIFDEF 125
           CPK++ VST+VN       +VFRNY      +S Y+G  +Y MWQA+RASSAAP  F E+
Sbjct: 563 CPKVAAVSTIVNRGSTPKAFVFRNYGHFPGSQSHYLGGCQYKMWQAIRASSAAPGYFAEY 622

Query: 126 HLDGLVHQDGGMTVNNPAAVAIHEATLLWPGAPLQCIVSCGTGRTLPKLNATPYSHDTQS 185
            L   +HQDGG+ +NNP+A+A+HE   LWP APL+CIVS GTGR         Y  D ++
Sbjct: 623 ALGNDLHQDGGLLLNNPSALAMHECKCLWPDAPLECIVSLGTGR---------YESDVRN 673

Query: 186 ASDSAQTAGSSLWHKMVKILESATDTEGVHTCLSDLLPQGVYYRFNPYLSEVPDLDETRP 245
                 T  +SL  K+  ++ SATDTE VH  L  LLP   Y+RFNP + E   LDE+R 
Sbjct: 674 -----NTTYTSLKTKLSNVINSATDTEEVHIMLDGLLPPDTYFRFNPVMCENIPLDESRN 728

Query: 246 EKLAQLRLDTDIYIRKNEAKFQAATQCLLREKSLVAKMSDYV 287
           EKL QL+L+   YI +NE K +   + L +EK+ + K++D++
Sbjct: 729 EKLDQLQLEGSKYIERNEHKMKKVAKILSQEKTTLQKINDWI 770




Calcium-independent phospholipase A2, which catalyzes the hydrolysis of the sn-2 position of glycerophospholipids, PtdSer and to a lower extent PtdCho. Cleaves membrane phospholipids.
Oryctolagus cuniculus (taxid: 9986)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: 5
>sp|Q8K1N1|PLPL8_MOUSE Calcium-independent phospholipase A2-gamma OS=Mus musculus GN=Pnpla8 PE=2 SV=1 Back     alignment and function description
>sp|Q9NP80|PLPL8_HUMAN Calcium-independent phospholipase A2-gamma OS=Homo sapiens GN=PNPLA8 PE=1 SV=1 Back     alignment and function description
>sp|O60733|PLPL9_HUMAN 85/88 kDa calcium-independent phospholipase A2 OS=Homo sapiens GN=PLA2G6 PE=1 SV=2 Back     alignment and function description
>sp|P97570|PLPL9_RAT 85/88 kDa calcium-independent phospholipase A2 OS=Rattus norvegicus GN=Pla2g6 PE=1 SV=2 Back     alignment and function description
>sp|P97819|PLPL9_MOUSE 85/88 kDa calcium-independent phospholipase A2 OS=Mus musculus GN=Pla2g6 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query298
270010041 540 hypothetical protein TcasGA2_TC009386 [T 0.919 0.507 0.519 2e-80
189238704 1010 PREDICTED: similar to Calcium-independen 0.919 0.271 0.519 5e-80
345487100 633 PREDICTED: calcium-independent phospholi 0.919 0.432 0.517 2e-79
332029292 732 Calcium-independent phospholipase A2-gam 0.916 0.372 0.494 3e-77
307214406 592 Calcium-independent phospholipase A2-gam 0.922 0.464 0.494 4e-77
307173927 599 Calcium-independent phospholipase A2-gam 0.919 0.457 0.507 8e-77
328776366 636 PREDICTED: calcium-independent phospholi 0.926 0.433 0.482 3e-76
322784404 632 hypothetical protein SINV_10740 [Solenop 0.919 0.433 0.492 8e-76
383856050 634 PREDICTED: calcium-independent phospholi 0.922 0.433 0.487 9e-76
242013187 528 conserved hypothetical protein [Pediculu 0.936 0.528 0.458 2e-75
>gi|270010041|gb|EFA06489.1| hypothetical protein TcasGA2_TC009386 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 147/283 (51%), Positives = 196/283 (69%), Gaps = 9/283 (3%)

Query: 6   TLDEALQLYMTLSTDLFTQNKLSGYTSMLLRHAYYDTDKFETFLREYIGETPMIQTNRQR 65
           TLDE  ++Y  LST +FTQ+ L G +S++  H+YYDT ++E  L+E IG   +I T R  
Sbjct: 249 TLDEISEIYKNLSTQIFTQSALKGTSSLVWSHSYYDTARWEKLLQEQIGNQTLISTARSS 308

Query: 66  KCPKLSVVSTVVNHDKVWPYVFRNYCIPYERKSQYMGDHKYAMWQAVRASSAAPSIFDEF 125
            CP+L V+S VVN  ++  YVFRNY +P   +SQY+G HK+ +W+AVRAS+AAP+ F+EF
Sbjct: 309 HCPRLCVLSAVVNQSRLSAYVFRNYSLPCRVQSQYLGSHKHLIWEAVRASAAAPTYFEEF 368

Query: 126 HLDGLVHQDGGMTVNNPAAVAIHEATLLWPGAPLQCIVSCGTGRTLPKLNATPYSHDTQS 185
            L+ ++HQDGG+  NNP AVAIHEA LLWP AP+QC++S GTGRT+P     P   +TQ 
Sbjct: 369 KLENMLHQDGGILFNNPTAVAIHEARLLWPEAPIQCVLSFGTGRTIP----LPVDPNTQK 424

Query: 186 ASDSAQTAGSSLWHKMVKILESATDTEGVHTCLSDLLPQGVYYRFNPYLSEVPDLDETRP 245
           A        SS   K   I+ESATDTEGVHT LSDLLP  +YYRFNPYL+E+ D+ E  P
Sbjct: 425 A-----VRNSSWKSKFYAIIESATDTEGVHTMLSDLLPPSIYYRFNPYLTEMLDIAEIDP 479

Query: 246 EKLAQLRLDTDIYIRKNEAKFQAATQCLLREKSLVAKMSDYVT 288
           +K+ QL  D  +Y+R+NE KF  A + LL+EKSL  K  D+++
Sbjct: 480 KKVEQLLRDAVMYLRRNEDKFHEAARVLLQEKSLSQKAIDWLS 522




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189238704|ref|XP_968978.2| PREDICTED: similar to Calcium-independent phospholipase A2-gamma (Intracellular membrane-associated calcium-independent phospholipase A2 gamma) (iPLA2-gamma) (Patatin-like phospholipase domain-containing protein 8) (Group VIB calcium-independent phospholipase [Tribolium castaneum] Back     alignment and taxonomy information
>gi|345487100|ref|XP_001601278.2| PREDICTED: calcium-independent phospholipase A2-gamma-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|332029292|gb|EGI69275.1| Calcium-independent phospholipase A2-gamma [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307214406|gb|EFN89477.1| Calcium-independent phospholipase A2-gamma [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|307173927|gb|EFN64675.1| Calcium-independent phospholipase A2-gamma [Camponotus floridanus] Back     alignment and taxonomy information
>gi|328776366|ref|XP_001122377.2| PREDICTED: calcium-independent phospholipase A2-gamma-like [Apis mellifera] Back     alignment and taxonomy information
>gi|322784404|gb|EFZ11375.1| hypothetical protein SINV_10740 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|383856050|ref|XP_003703523.1| PREDICTED: calcium-independent phospholipase A2-gamma-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|242013187|ref|XP_002427296.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212511637|gb|EEB14558.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query298
ZFIN|ZDB-GENE-070705-553694 pnpla8 "patatin-like phospholi 0.922 0.396 0.446 1.5e-58
UNIPROTKB|E1BVG7782 E1BVG7 "Uncharacterized protei 0.909 0.346 0.451 8.4e-58
WB|WBGene00022233546 Y73B6BL.4 [Caenorhabditis eleg 0.885 0.483 0.425 4.6e-57
MGI|MGI:1914702776 Pnpla8 "patatin-like phospholi 0.892 0.342 0.434 2e-56
RGD|1311444776 Pnpla8 "patatin-like phospholi 0.892 0.342 0.438 2e-56
UNIPROTKB|E1BE78784 PNPLA8 "Uncharacterized protei 0.892 0.339 0.438 5.3e-56
UNIPROTKB|E2QZP1784 PNPLA8 "Uncharacterized protei 0.892 0.339 0.438 5.3e-56
UNIPROTKB|F6Y4R5713 PNPLA8 "Uncharacterized protei 0.892 0.373 0.438 5.3e-56
UNIPROTKB|Q9NP80782 PNPLA8 "Calcium-independent ph 0.892 0.340 0.434 2.9e-55
UNIPROTKB|J3KPL1720 PNPLA8 "Calcium-independent ph 0.479 0.198 0.426 2e-26
ZFIN|ZDB-GENE-070705-553 pnpla8 "patatin-like phospholipase domain containing 8" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
 Identities = 130/291 (44%), Positives = 180/291 (61%)

Query:     7 LDEALQLYMTLSTDLFTQNKLSGYTSMLLRHAYYDTDKFETFLREYIGETPMIQTNRQRK 66
             L E  +LY  L +D+F QN + G   M   HAYYD+  +E  L+E +G   M++T++   
Sbjct:   410 LKECEELYRKLGSDVFKQNLIVGTVKMGWSHAYYDSQMWEEILKEKMGHGLMVETSKNPN 469

Query:    67 CPKLSVVSTVVNHD-KVWPYVFRNY-CIPYERKSQYMGDHKYAMWQAVRASSAAPSIFDE 124
             CPK+S VSTVVN    +  YVFRNY  +P  R S Y+G  ++ MWQA+RASSAAP  F E
Sbjct:   470 CPKVSAVSTVVNRGLPLKAYVFRNYNFLPGVR-SHYLGSCQHKMWQAIRASSAAPGYFQE 528

Query:   125 FHLDGLVHQDGGMTVNNPAAVAIHEATLLWPGAPLQCIVSCGTGRTLPKLNATPYSHDTQ 184
             F L   +HQDGG+ +NNP A+AIHE+  LWP  P+QC+VS GTGR         Y   T+
Sbjct:   529 FVLGNDLHQDGGLLINNPTALAIHESKCLWPNTPVQCVVSLGTGR---------YETATK 579

Query:   185 SASDSAQTAGSSLWHKMVKILESATDTEGVHTCLSDLLPQGVYYRFNPYLSEVPDLDETR 244
             +   SA T  +SL  K+  ++ SATDTE VHT L  LLP   Y+RFNPY+SE   LDE R
Sbjct:   580 T---SASTY-TSLKTKLTNVISSATDTEEVHTMLDALLPPNTYFRFNPYMSEDVPLDENR 635

Query:   245 PEKLAQLRLDTDIYIRKNEAKFQAATQCLLREKSLVAKMSDYVTRRAYVWN 295
              E+L  L+ +   Y+ +NE K +     L +EK +V K++++V  +A +++
Sbjct:   636 QERLDYLQAEGRRYLERNENKLKKVASVLTQEKGIVQKLAEWVQLKADMYD 686




GO:0006629 "lipid metabolic process" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0016787 "hydrolase activity" evidence=IEA
UNIPROTKB|E1BVG7 E1BVG7 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
WB|WBGene00022233 Y73B6BL.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
MGI|MGI:1914702 Pnpla8 "patatin-like phospholipase domain containing 8" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1311444 Pnpla8 "patatin-like phospholipase domain containing 8" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1BE78 PNPLA8 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2QZP1 PNPLA8 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F6Y4R5 PNPLA8 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NP80 PNPLA8 "Calcium-independent phospholipase A2-gamma" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|J3KPL1 PNPLA8 "Calcium-independent phospholipase A2-gamma" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
cd07211308 cd07211, Pat_PNPLA8, Patatin-like phospholipase do 1e-110
cd07216309 cd07216, Pat17_PNPLA8_PNPLA9_like3, Patatin-like p 4e-26
cd07212312 cd07212, Pat_PNPLA9, Patatin-like phospholipase do 2e-24
cd07199258 cd07199, Pat17_PNPLA8_PNPLA9_like, Patatin-like ph 3e-24
cd07215329 cd07215, Pat17_PNPLA8_PNPLA9_like2, Patatin-like p 1e-13
pfam01734189 pfam01734, Patatin, Patatin-like phospholipase 1e-12
cd07205175 cd07205, Pat_PNPLA6_PNPLA7_NTE1_like, Patatin-like 5e-09
cd07217344 cd07217, Pat17_PNPLA8_PNPLA9_like4, Patatin-like p 8e-08
COG1752306 COG1752, RssA, Predicted esterase of the alpha-bet 5e-06
cd07213288 cd07213, Pat17_PNPLA8_PNPLA9_like1, Patatin-like p 1e-05
cd07198172 cd07198, Patatin, Patatin-like phospholipase 0.002
>gnl|CDD|132850 cd07211, Pat_PNPLA8, Patatin-like phospholipase domain containing protein 8 Back     alignment and domain information
 Score =  321 bits (824), Expect = e-110
 Identities = 126/258 (48%), Positives = 169/258 (65%), Gaps = 14/258 (5%)

Query: 6   TLDEALQLYMTLSTDLFTQNK-LSGYTSMLLRHAYYDTDKFETFLREYIGETPMIQTNRQ 64
           +LDE  +LY  L  D+F+QN  +SG + ++L HAYYDT+ +E  L+E +G   +I T+  
Sbjct: 64  SLDECEELYRKLGKDVFSQNTYISGTSRLVLSHAYYDTETWEKILKEMMGSDELIDTSAD 123

Query: 65  RKCPKLSVVSTVVNHDKVWPYVFRNYCIPYERKSQYMGDHKYAMWQAVRASSAAPSIFDE 124
             CPK++ VST VN   + PYVFRNY  P   +S Y+G  K+ +W+A+RASSAAP  F+E
Sbjct: 124 PNCPKVACVSTQVNRTPLKPYVFRNYNHPPGTRSHYLGSCKHKLWEAIRASSAAPGYFEE 183

Query: 125 FHLDGLVHQDGGMTVNNPAAVAIHEATLLWPGAPLQCIVSCGTGRTLPKLNATPYSHDTQ 184
           F L   +HQDGG+  NNP A+A+HEA LLWP  P+QC+VS GTGR               
Sbjct: 184 FKLGNNLHQDGGLLANNPTALALHEAKLLWPDTPIQCLVSVGTGR-------------YP 230

Query: 185 SASDSAQTAGSSLWHKMVKILESATDTEGVHTCLSDLLPQGVYYRFNPYLSEVPDLDETR 244
           S+        +SL  K++ +++SATDTE VHT L DLLP  VY+RFNP +SE  +LDETR
Sbjct: 231 SSVRLETGGYTSLKTKLLNLIDSATDTERVHTALDDLLPPDVYFRFNPVMSECVELDETR 290

Query: 245 PEKLAQLRLDTDIYIRKN 262
           PEKL QL+ DT  YI++N
Sbjct: 291 PEKLDQLQDDTLEYIKRN 308


PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus. Length = 308

>gnl|CDD|132855 cd07216, Pat17_PNPLA8_PNPLA9_like3, Patatin-like phospholipase Back     alignment and domain information
>gnl|CDD|132851 cd07212, Pat_PNPLA9, Patatin-like phospholipase domain containing protein 9 Back     alignment and domain information
>gnl|CDD|132838 cd07199, Pat17_PNPLA8_PNPLA9_like, Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17 Back     alignment and domain information
>gnl|CDD|132854 cd07215, Pat17_PNPLA8_PNPLA9_like2, Patatin-like phospholipase of bacteria Back     alignment and domain information
>gnl|CDD|216671 pfam01734, Patatin, Patatin-like phospholipase Back     alignment and domain information
>gnl|CDD|132844 cd07205, Pat_PNPLA6_PNPLA7_NTE1_like, Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1 Back     alignment and domain information
>gnl|CDD|132856 cd07217, Pat17_PNPLA8_PNPLA9_like4, Patatin-like phospholipase Back     alignment and domain information
>gnl|CDD|224666 COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only] Back     alignment and domain information
>gnl|CDD|132852 cd07213, Pat17_PNPLA8_PNPLA9_like1, Patatin-like phospholipase Back     alignment and domain information
>gnl|CDD|132837 cd07198, Patatin, Patatin-like phospholipase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 298
KOG4231|consensus763 100.0
cd07211308 Pat_PNPLA8 Patatin-like phospholipase domain conta 100.0
cd07215329 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipa 100.0
cd07212312 Pat_PNPLA9 Patatin-like phospholipase domain conta 100.0
cd07216309 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipa 100.0
cd07214349 Pat17_isozyme_like Patatin-like phospholipase of p 100.0
cd07213288 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipa 100.0
cd07217344 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipa 100.0
cd07199258 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipas 99.97
COG3621394 Patatin [General function prediction only] 99.87
cd07207194 Pat_ExoU_VipD_like ExoU and VipD-like proteins; ho 99.73
cd07205175 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholi 99.71
cd07210221 Pat_hypo_W_succinogenes_WS1459_like Hypothetical p 99.67
cd07225306 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domai 99.67
cd07228175 Pat_NTE_like_bacteria Bacterial patatin-like phosp 99.57
cd07209215 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin sim 99.49
cd07208266 Pat_hypo_Ecoli_yjju_like Hypothetical patatin simi 99.37
cd07227269 Pat_Fungal_NTE1 Fungal patatin-like phospholipase 99.36
PRK10279300 hypothetical protein; Provisional 99.27
cd07198172 Patatin Patatin-like phospholipase. Patatin is a s 99.14
cd07204243 Pat_PNPLA_like Patatin-like phospholipase domain c 99.14
PF01734204 Patatin: Patatin-like phospholipase This Prosite f 99.13
cd07218245 Pat_iPLA2 Calcium-independent phospholipase A2; Cl 99.11
cd07230421 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TG 99.05
cd07221252 Pat_PNPLA3 Patatin-like phospholipase domain conta 99.01
cd07222246 Pat_PNPLA4 Patatin-like phospholipase domain conta 99.01
cd07232407 Pat_PLPL Patain-like phospholipase. Patatin-like p 98.99
cd07219382 Pat_PNPLA1 Patatin-like phospholipase domain conta 98.98
COG1752306 RssA Predicted esterase of the alpha-beta hydrolas 98.98
KOG0513|consensus503 98.92
cd07224233 Pat_like Patatin-like phospholipase. Patatin-like 98.84
cd07220249 Pat_PNPLA2 Patatin-like phospholipase domain conta 98.81
TIGR03607 739 patatin-related protein. This bacterial protein fa 98.65
cd07223405 Pat_PNPLA5-mammals Patatin-like phospholipase doma 98.6
cd07206298 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 98.42
cd01819155 Patatin_and_cPLA2 Patatins and Phospholipases. Pat 98.31
KOG0513|consensus503 98.24
cd07231323 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar 98.15
COG4667292 Predicted esterase of the alpha-beta hydrolase sup 98.12
cd07229391 Pat_TGL3_like Triacylglycerol lipase 3. Triacylgly 98.03
KOG2968|consensus1158 95.9
KOG3773|consensus354 94.62
KOG2214|consensus543 93.2
>KOG4231|consensus Back     alignment and domain information
Probab=100.00  E-value=2e-50  Score=370.97  Aligned_cols=274  Identities=40%  Similarity=0.639  Sum_probs=252.1

Q ss_pred             CCCCCHHHHHHHHHHhhhcccCCCccccccccccccccCCcHHHHHHHHHHhCCC-CccccccCCCCCeEEEEEEeecCC
Q psy16585          2 LIGRTLDEALQLYMTLSTDLFTQNKLSGYTSMLLRHAYYDTDKFETFLREYIGET-PMIQTNRQRKCPKLSVVSTVVNHD   80 (298)
Q Consensus         2 a~g~s~~e~~~~y~~~~~~iF~~~~~~~~~~~~~~~~~y~~~~Le~~l~~~~g~~-~l~~~~~~~~~~~~~v~s~~~~~~   80 (298)
                      +.+|+++||.++|.++++.+|..+...+-....|.+++|++...|.+|++..|.. +|..+++...+|+|+||++-++..
T Consensus       469 ~k~m~l~eCeEiY~~lgk~vFsq~v~~g~~~~sw~Hs~y~~n~we~iLKem~ged~~mi~tsr~~~~PkvavVStiVn~~  548 (763)
T KOG4231|consen  469 VKLMTLEECEEIYKNLGKLVFSQSVPKGNEAASWIHSKYSANEWERILKEMCGEDGDMIITSRVKNVPKVAVVSTIVNVM  548 (763)
T ss_pred             hcCccHHHHHHHHHHHhHHHhhccccccchhheehhhhcchHHHHHHHHHHhhhhhhHHHhhccCCCCceeehhhhhhcC
Confidence            5789999999999999999999988777666678899999999999999999976 488887778899999999988844


Q ss_pred             -CCceEEeecCCCCcccccccCCCCchhHHHHHHHhccCCCCccceeeCCceeeecccCCCChHHHHHHHHHHhCCCCCC
Q psy16585         81 -KVWPYVFRNYCIPYERKSQYMGDHKYAMWQAVRASSAAPSIFDEFHLDGLVHQDGGMTVNNPAAVAIHEATLLWPGAPL  159 (298)
Q Consensus        81 -~~~~~~f~~y~~~~~~~~~~~~~~~~~l~~a~~ATsAaP~yF~p~~i~~~~~iDGG~~~NNP~~~a~~ea~~~~p~~~~  159 (298)
                       +.+|++||||.+|.+.+|.|.+..+..+|+|+|||||||.||..+.+++..+.|||+.+|||+..|+.||+-+||+.++
T Consensus       549 pT~qpfIFRNY~hp~G~~Shy~Ggc~h~~WqAIrASsAAP~Yf~e~~lgn~l~QDGgi~aNNPta~A~hEaklLWPD~~i  628 (763)
T KOG4231|consen  549 PTAQPFIFRNYQHPVGTQSHYMGGCKHQVWQAIRASSAAPYYFDEFSLGNYLWQDGGIVANNPTAFAIHEAKLLWPDTKI  628 (763)
T ss_pred             CCccceeeeccCCCCCcchhhcccchHHHHHHHHhcccCCcchhhhccccceeccCcEeecCccHHHhhhhhccCCCCCc
Confidence             5899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CEEEEecCCCCCCCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHhcCchHHHHHHHhhCCCCceEEeCCCCCCCCC
Q psy16585        160 QCIVSCGTGRTLPKLNATPYSHDTQSASDSAQTAGSSLWHKMVKILESATDTEGVHTCLSDLLPQGVYYRFNPYLSEVPD  239 (298)
Q Consensus       160 ~~vlSlGTG~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~~~l~~~i~~~~~~e~~~~~~~~~~~~~~Y~R~n~~~~~~i~  239 (298)
                      .|+||||+|..+.+...             ..+...++.++|.+++.+++++|.+|..+..+++++.||||||-....++
T Consensus       629 ~C~VSiGsGr~~t~Vr~-------------~tv~yts~~~kL~~~i~SatdtEevh~~l~~mLPe~~YfRFNPvm~~~~~  695 (763)
T KOG4231|consen  629 DCLVSIGSGRVPTRVRK-------------GTVRYTSTGQKLIESICSATDTEEVHSTLLPMLPEIQYFRFNPVMDRCME  695 (763)
T ss_pred             cEEEEecCCcccccccC-------------CceEEecHHHHHHHHHhcccchHHHHHhhhccCCchheEecchhhhcccC
Confidence            99999999999876532             12455777889999999999999999999999999999999999988899


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhcccchHHhHH----HHHH
Q psy16585        240 LDETRPEKLAQLRLDTDIYIRKNEAKFQAATQCLLREKSLVAKMS----DYVT  288 (298)
Q Consensus       240 LD~~~~~~i~~l~~~t~~yl~~~~~~i~~~~~~L~~~~~~~~~~~----~~~~  288 (298)
                      ||+++++.+++|+..++.|+++|..++.++|++|.-++...|+..    ||-.
T Consensus       696 LDE~d~e~l~ql~~~~e~yI~rN~qk~k~vaerL~l~~~~~qk~~~~~~~wm~  748 (763)
T KOG4231|consen  696 LDETDPEILLQLEAAIEEYIQRNPQKFKNVAERLTLPFLNDQKWCDLKPRWMN  748 (763)
T ss_pred             cCccCHHHHHHHHHHHHHHHHhChHHHHHHHHHhcCCcchhHHHhhhhHHHHh
Confidence            999999999999999999999999999999999999999999999    6643



>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8 Back     alignment and domain information
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria Back     alignment and domain information
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9 Back     alignment and domain information
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase Back     alignment and domain information
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants Back     alignment and domain information
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase Back     alignment and domain information
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase Back     alignment and domain information
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17 Back     alignment and domain information
>COG3621 Patatin [General function prediction only] Back     alignment and domain information
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2 Back     alignment and domain information
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1 Back     alignment and domain information
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes Back     alignment and domain information
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7 Back     alignment and domain information
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6 Back     alignment and domain information
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli Back     alignment and domain information
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli Back     alignment and domain information
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6 Back     alignment and domain information
>PRK10279 hypothetical protein; Provisional Back     alignment and domain information
>cd07198 Patatin Patatin-like phospholipase Back     alignment and domain information
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family Back     alignment and domain information
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2 Back     alignment and domain information
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2 Back     alignment and domain information
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5 Back     alignment and domain information
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3 Back     alignment and domain information
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4 Back     alignment and domain information
>cd07232 Pat_PLPL Patain-like phospholipase Back     alignment and domain information
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1 Back     alignment and domain information
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only] Back     alignment and domain information
>KOG0513|consensus Back     alignment and domain information
>cd07224 Pat_like Patatin-like phospholipase Back     alignment and domain information
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2 Back     alignment and domain information
>TIGR03607 patatin-related protein Back     alignment and domain information
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5 Back     alignment and domain information
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase Back     alignment and domain information
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases Back     alignment and domain information
>KOG0513|consensus Back     alignment and domain information
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase Back     alignment and domain information
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only] Back     alignment and domain information
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3 Back     alignment and domain information
>KOG2968|consensus Back     alignment and domain information
>KOG3773|consensus Back     alignment and domain information
>KOG2214|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
1oxw_A373 Patatin; alpha/beta class fold with approximately 3e-30
>1oxw_A Patatin; alpha/beta class fold with approximately three layers; 2.20A {Solanum cardiophyllum} SCOP: c.19.1.3 Length = 373 Back     alignment and structure
 Score =  116 bits (291), Expect = 3e-30
 Identities = 46/288 (15%), Positives = 86/288 (29%), Gaps = 47/288 (16%)

Query: 6   TLDEALQLYMTLSTDLFTQNKLSGYTSMLLRHAYYDTDKFETFLREYIGETPMIQTNRQR 65
              E +  Y      +F  +              YD       L+E +GET + Q   + 
Sbjct: 85  AAKEIVPFYFEHGPQIFNPSGQI-------LGPKYDGKYLMQVLQEKLGETRVHQALTEV 137

Query: 66  KCPKLSVVSTVVNHDKVWPYVFRNYCIPYERKSQYMGDHKYAMWQAVRASSAAPSIFDEF 125
                       +     P +F    +          +    M+    +++AAP+ F   
Sbjct: 138 VISS-------FDIKTNKPVIFTKSNLANSP------ELDAKMYDISYSTAAAPTYFPPH 184

Query: 126 HLDGLVHQ---------DGGM-TVNNPAAVAIHEATLLWPGAPL-----------QCIVS 164
           +                DG + TV +PA ++I  AT L    P              ++S
Sbjct: 185 YFVTNTSNGDEYEFNLVDGAVATVADPALLSISVATRLAQKDPAFASIRSLNYKKMLLLS 244

Query: 165 CGTGRTLPKLNATPYSHDTQSASDSAQTAGSSLWHKMVKILESATDTEGVHTCLSDLLPQ 224
            GTG T    +    ++  + A+         +  KM     S      + T    L  +
Sbjct: 245 LGTGTT----SEFDKTYTAKEAATWTAVHWMLVIQKMTDAASSYMTDYYLSTAFQALDSK 300

Query: 225 GVYYRFN--PYLSEVPDLDETRPEKLAQLRLDTDIYIRKNEAKFQAAT 270
             Y R           ++D+     +  L    +  ++K  ++    T
Sbjct: 301 NNYLRVQENALTGTTTEMDDASEANMELLVQVGENLLKKPVSEDNPET 348


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query298
1oxw_A373 Patatin; alpha/beta class fold with approximately 100.0
4akf_A 577 VIPD; transferase; 2.90A {Legionella pneumophila} 99.39
3tu3_B 711 EXOU; type III secretion system, SPC infectious di 98.95
>1oxw_A Patatin; alpha/beta class fold with approximately three layers; 2.20A {Solanum cardiophyllum} SCOP: c.19.1.3 Back     alignment and structure
Probab=100.00  E-value=2.4e-39  Score=301.88  Aligned_cols=250  Identities=20%  Similarity=0.276  Sum_probs=200.4

Q ss_pred             CCHHHHHHHHHHhhhcccCCCccccccccccccccCCcHHHHHHHHHHhCCCCccccccCCCCCeEEEEEEeecCCCCce
Q psy16585          5 RTLDEALQLYMTLSTDLFTQNKLSGYTSMLLRHAYYDTDKFETFLREYIGETPMIQTNRQRKCPKLSVVSTVVNHDKVWP   84 (298)
Q Consensus         5 ~s~~e~~~~y~~~~~~iF~~~~~~~~~~~~~~~~~y~~~~Le~~l~~~~g~~~l~~~~~~~~~~~~~v~s~~~~~~~~~~   84 (298)
                      |+++||.++|.+++.+||...+       .+.+++|+.+.|++.|++.||+.++.+..    + +++|++  +|..+++|
T Consensus        84 ~s~~el~~~~~~~~~~iF~~~~-------~l~~~~~~~~~L~~~l~~~~~~~~l~d~~----~-~~~i~a--td~~~~~~  149 (373)
T 1oxw_A           84 AAAKEIVPFYFEHGPQIFNPSG-------QILGPKYDGKYLMQVLQEKLGETRVHQAL----T-EVVISS--FDIKTNKP  149 (373)
T ss_dssp             SCGGGHHHHHHHHHHHHTCCCC-------CSSSCSCCCHHHHHHHHHHHTTCBGGGCS----S-EEEEEE--EETTTTEE
T ss_pred             CCHHHHHHHHHHhhHhhcCCCC-------ccccCCcCcHHHHHHHHHHHCcCcHHHcC----C-CEEEEe--EECCCCCe
Confidence            6899999999999999998752       12457999999999999999999987642    3 577755  58889999


Q ss_pred             EEeecCCCCcccccccCCCCchhHHHHHHHhccCCCCccceeeC-----C----ceeeecccCC-CChHHHHHHHHHHhC
Q psy16585         85 YVFRNYCIPYERKSQYMGDHKYAMWQAVRASSAAPSIFDEFHLD-----G----LVHQDGGMTV-NNPAAVAIHEATLLW  154 (298)
Q Consensus        85 ~~f~~y~~~~~~~~~~~~~~~~~l~~a~~ATsAaP~yF~p~~i~-----~----~~~iDGG~~~-NNP~~~a~~ea~~~~  154 (298)
                      ++|++|..+..      ...+..+|+|++||||+|+||+|+.++     |    ..|+|||+.+ |||+..|+.|++.+|
T Consensus       150 ~~f~~~~~~~~------~~~~~~l~~av~ASsA~P~~F~p~~i~~~d~~G~~~~~~~vDGGv~~~NnP~~~a~~ea~~~~  223 (373)
T 1oxw_A          150 VIFTKSNLANS------PELDAKMYDISYSTAAAPTYFPPHYFVTNTSNGDEYEFNLVDGAVATVADPALLSISVATRLA  223 (373)
T ss_dssp             EEEESSSTTTC------GGGCCBHHHHHHHHHCCTTTSCCEEEEEECTTSCEEEEEEEEGGGGTCSSCHHHHHHHHHHHT
T ss_pred             EEEeCCCCCCC------CccCchHHHHHHHHccCCcCcCcEEeeccCCCCcccceeeecCcccccCChHHHHHHHHHHHh
Confidence            99999986542      245789999999999999999999984     4    3899999999 999999999999988


Q ss_pred             CCC-----------CCCEEEEecCCCCCCCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHhcCchHHHHHHHhhC-
Q psy16585        155 PGA-----------PLQCIVSCGTGRTLPKLNATPYSHDTQSASDSAQTAGSSLWHKMVKILESATDTEGVHTCLSDLL-  222 (298)
Q Consensus       155 p~~-----------~~~~vlSlGTG~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~~~l~~~i~~~~~~e~~~~~~~~~~-  222 (298)
                      ++.           +..+|||||||..+.....  +     ...+..+||..+|..++++++..+. ++.++.++..++ 
T Consensus       224 ~~~~~~~~~~~~~~~~~~vvSlGTG~~~~~~~~--~-----~~~~~~~wG~~~w~~~l~~~~~~~~-~~~~d~~~~~~~~  295 (373)
T 1oxw_A          224 QKDPAFASIRSLNYKKMLLLSLGTGTTSEFDKT--Y-----TAKEAATWTAVHWMLVIQKMTDAAS-SYMTDYYLSTAFQ  295 (373)
T ss_dssp             TTCGGGTTSTTCCGGGEEEEEECCCCBCTTSSC--C-----CHHHHTTCCHHHHHTTHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred             ccCcccccccccccCceEEEEecCCCCCCcccc--c-----ChhhhhhhhhHhHHHHHHHHHHHhh-HHHHHHHHHHHhh
Confidence            743           1248999999986432111  1     1124456899999988888765432 456666555443 


Q ss_pred             ---CCCceEEeCC-CCC-CCCCCCCCCHHHHHHHHHHHHHHHHh---------CHHHHHHHHHHHhcccchHHh
Q psy16585        223 ---PQGVYYRFNP-YLS-EVPDLDETRPEKLAQLRLDTDIYIRK---------NEAKFQAATQCLLREKSLVAK  282 (298)
Q Consensus       223 ---~~~~Y~R~n~-~~~-~~i~LD~~~~~~i~~l~~~t~~yl~~---------~~~~i~~~~~~L~~~~~~~~~  282 (298)
                         .+++|+|||+ .++ ..++||++++++++.|...|++|+.+         |+++|+++|+.|++++..|..
T Consensus       296 ~~~~~~~Y~Ri~~~~l~~~~~~lD~~~~~~l~~L~~~~~~~l~~~~~~~~~~tn~~~l~~~a~~L~~e~~~r~~  369 (373)
T 1oxw_A          296 ALDSKNNYLRVQENALTGTTTEMDDASEANMELLVQVGENLLKKPVSEDNPETYEEALKRFAKLLSDRKKLRAN  369 (373)
T ss_dssp             HTTCGGGEEEECCCCBCGGGGCTTCCCHHHHHHHHHHHHHHHTSBSSSSCCCBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCcEEEEeCCCCCCcccccccCCHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHhhcccc
Confidence               3679999998 465 47899999999999999999999998         788999999999998876653



>4akf_A VIPD; transferase; 2.90A {Legionella pneumophila} Back     alignment and structure
>3tu3_B EXOU; type III secretion system, SPC infectious diseases, structural genomics, center for struct genomics of infectious diseases, csgid; 1.92A {Pseudomonas aeruginosa} PDB: 4akx_B* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 298
d1oxwa_360 c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solan 3e-24
>d1oxwa_ c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]} Length = 360 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: Patatin
domain: Patatin
species: Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]
 Score = 98.5 bits (244), Expect = 3e-24
 Identities = 44/281 (15%), Positives = 81/281 (28%), Gaps = 32/281 (11%)

Query: 4   GRTLDEALQLYMTLSTDLFTQNKLSGYTSMLLRHAYYDTDKFETFLREYIGETPMIQTNR 63
               +        +    F         S  +    YD       L+E +GET + Q   
Sbjct: 65  PNENNRPFAAAKEIVPFYFEHGPQIFNPSGQILGPKYDGKYLMQVLQEKLGETRVHQALT 124

Query: 64  QRKCPKLSVVSTVVNHDKVWPYVFRNYCIPYERKSQYMGDHKYAMWQAVRASSAAPSIFD 123
           +          +  +     P +F    +          +    M+    +++AAP+ F 
Sbjct: 125 EVVI-------SSFDIKTNKPVIFTKSNL------ANSPELDAKMYDISYSTAAAPTYFP 171

Query: 124 EFHLDGLVHQ---------DGGM-TVNNPAAVAIHEATLLWPGAPL---QCIVSCGTGRT 170
             +                DG + TV +PA ++I  AT L    P       ++      
Sbjct: 172 PHYFVTNTSNGDEYEFNLVDGAVATVADPALLSISVATRLAQKDPAFASIRSLNYKKMLL 231

Query: 171 LPKLNATPYSHDTQSASDSAQTAGSSLW----HKMVKILESATDTEGVHTCLSDLLPQGV 226
           L     T    D    +  A T  +  W     KM     S      + T    L  +  
Sbjct: 232 LSLGTGTTSEFDKTYTAKEAATWTAVHWMLVIQKMTDAASSYMTDYYLSTAFQALDSKNN 291

Query: 227 YYRFNP--YLSEVPDLDETRPEKLAQLRLDTDIYIRKNEAK 265
           Y R           ++D+     +  L    +  ++K  ++
Sbjct: 292 YLRVQENALTGTTTEMDDASEANMELLVQVGENLLKKPVSE 332


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query298
d1oxwa_360 Patatin {Heartleaf nightshade (Solanum cardiophyll 99.98
>d1oxwa_ c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: Patatin
domain: Patatin
species: Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]
Probab=99.98  E-value=1e-31  Score=246.45  Aligned_cols=250  Identities=20%  Similarity=0.254  Sum_probs=190.2

Q ss_pred             CCCHHHHHHHHHHhhhcccCCCccccccccccccccCCcHHHHHHHHHHhCCCCccccccCCCCCeEEEEEEeecCCCCc
Q psy16585          4 GRTLDEALQLYMTLSTDLFTQNKLSGYTSMLLRHAYYDTDKFETFLREYIGETPMIQTNRQRKCPKLSVVSTVVNHDKVW   83 (298)
Q Consensus         4 g~s~~e~~~~y~~~~~~iF~~~~~~~~~~~~~~~~~y~~~~Le~~l~~~~g~~~l~~~~~~~~~~~~~v~s~~~~~~~~~   83 (298)
                      .++.+++.+.|......+|....+       ..+++|+.+.|+++|++.||+.++.+..    . ++.+++  ++..++.
T Consensus        72 ~~~~~~~~~~~~~~~~~~f~~~~~-------~~~~~~~~~~l~~~l~~~~~~~~~~~~~----~-~~~~~a--~~~~~~~  137 (360)
T d1oxwa_          72 FAAAKEIVPFYFEHGPQIFNPSGQ-------ILGPKYDGKYLMQVLQEKLGETRVHQAL----T-EVVISS--FDIKTNK  137 (360)
T ss_dssp             SSCGGGHHHHHHHHHHHHTCCCCC-------SSSCSCCCHHHHHHHHHHHTTCBGGGCS----S-EEEEEE--EETTTTE
T ss_pred             HHHHHHHHHHHHhhcchhhhcccc-------ccCcccchHHHHHHHHHHhCCchhhhcc----C-cceeEe--cccCCCC
Confidence            356788999999999999976542       2357999999999999999999888742    2 466644  5888899


Q ss_pred             eEEeecCCCCcccccccCCCCchhHHHHHHHhccCCCCccceeeCC---------ceeeecccCC-CChHHHHHHHHHHh
Q psy16585         84 PYVFRNYCIPYERKSQYMGDHKYAMWQAVRASSAAPSIFDEFHLDG---------LVHQDGGMTV-NNPAAVAIHEATLL  153 (298)
Q Consensus        84 ~~~f~~y~~~~~~~~~~~~~~~~~l~~a~~ATsAaP~yF~p~~i~~---------~~~iDGG~~~-NNP~~~a~~ea~~~  153 (298)
                      +++|++|+.+..      ...++++|+|++||||+|+||||+++.+         ..|+|||+.+ |||+.+|+.|+..+
T Consensus       138 ~~~~~~~~~~~~------~~~~~~l~~a~~ASsA~P~~F~p~~~~~~~~~~~~~~~~~~Dgg~~~~nnp~~~a~~e~~~l  211 (360)
T d1oxwa_         138 PVIFTKSNLANS------PELDAKMYDISYSTAAAPTYFPPHYFVTNTSNGDEYEFNLVDGAVATVADPALLSISVATRL  211 (360)
T ss_dssp             EEEEESSSTTTC------GGGCCBHHHHHHHHHCCTTTSCCEEEEEECTTSCEEEEEEEEGGGGTCSSCHHHHHHHHHHH
T ss_pred             eEEEeccccccC------CcccchHHHhhhhhhcCCCCCCCEEEecccCCCCceeEEecccchhhccCchHHHHHHHHHh
Confidence            999999886542      2457899999999999999999998753         3699999986 58999999999999


Q ss_pred             CCCCC-----------CCEEEEecCCCCCCCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHhcCchHHHHHH----
Q psy16585        154 WPGAP-----------LQCIVSCGTGRTLPKLNATPYSHDTQSASDSAQTAGSSLWHKMVKILESATDTEGVHTCL----  218 (298)
Q Consensus       154 ~p~~~-----------~~~vlSlGTG~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~~~l~~~i~~~~~~e~~~~~~----  218 (298)
                      ||...           ..+++|+|||..+.....  .     ...+..+||..+|...+..++.... ++..+.++    
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~s~gtg~~~~~~~~--~-----~~~~~~~~g~~~~~~~l~~~~~~~~-~~~~~~~~~~~~  283 (360)
T d1oxwa_         212 AQKDPAFASIRSLNYKKMLLLSLGTGTTSEFDKT--Y-----TAKEAATWTAVHWMLVIQKMTDAAS-SYMTDYYLSTAF  283 (360)
T ss_dssp             TTTCGGGTTSTTCCGGGEEEEEECCCCBCTTSSC--C-----CHHHHTTCCHHHHHTTHHHHHHHHH-HHHHHHHHHHHH
T ss_pred             cccCccccccccCCccceeeeccccccccccccc--c-----chhhhhhcchHhHHHHHHHHHHhhh-HHHHHHHHHHHH
Confidence            97421           238999999987654322  1     1124456888889887766554322 22333222    


Q ss_pred             HhhCCCCceEEeCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHh---------CHHHHHHHHHHHhcccchHH
Q psy16585        219 SDLLPQGVYYRFNPYLS--EVPDLDETRPEKLAQLRLDTDIYIRK---------NEAKFQAATQCLLREKSLVA  281 (298)
Q Consensus       219 ~~~~~~~~Y~R~n~~~~--~~i~LD~~~~~~i~~l~~~t~~yl~~---------~~~~i~~~~~~L~~~~~~~~  281 (298)
                      ......++|+|||+...  ..+.||+.+++.++.|+..|++|+.+         +++.++++|+.|.++|+.|.
T Consensus       284 ~~~~~~~~Y~R~~~~~~~~~~~~lDd~s~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~L~~~~~~L~~er~~r~  357 (360)
T d1oxwa_         284 QALDSKNNYLRVQENALTGTTTEMDDASEANMELLVQVGENLLKKPVSEDNPETYEEALKRFAKLLSDRKKLRA  357 (360)
T ss_dssp             HHTTCGGGEEEECCCCBCGGGGCTTCCCHHHHHHHHHHHHHHHTSBSSSSCCCBHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCCCcEEEEcCCccccccccccCCCHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence            23334678999998653  46789999999999999999999975         35679999999988877764