Psyllid ID: psy16775

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300------
Protein Sequence
MFGSAAIQDVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSSNNNKVKITPVPSKK
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHccccccHHHHHHHHccccccccccccccHHHHHHHHHHHHcccccccccccccccccHHHcccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHccHHcccccccccccccccHcHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccEcccHHHHHHHHHHHHHccccccHccccccccccHcccccccHHHHHHHHHHHcccccHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccEEccccEEEEcccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccEEEEEccccc
Coil and Loop (DISEMBL)
MFGSAAIQDVYQWKLLNHVArdhnmslkpahlsykctvctATFGMYRQFENHVysahsvaprrpatdkkpqgqstdpmlkplkindeitiipqpprptassssstsssnnnkvkitpdLEQLRNHMQWIHkvkihpkmiynrpplncqkcqfrfftdqGLERHLLGSHGLVTSSMQEAAnkgkdggrcpvcgrVYQWKLLNHVArdhnmslkpahlsykctvctATFGMYRQFENHVysahsvaprrpatdkkpqgqstdpmlkplkindeitiipqpprptassssstsssnnnkvkitpvpskk
Flexible Loop (DISEMBL)
mfgsaaiqDVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAhsvaprrpatdkkpqgqstdpmlkPLKINDEITIIPQpprptassssstsssnnnkvKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAankgkdggrcpVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAhsvaprrpatdkkpqgqstdpmlkPLKINDEITIIPqpprptassssstsssnnnkvkitpvpskk
Low Complexity Region (SEG)
MFGSAAIQDVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTAssssstsssnnnKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTAssssstsssnnnKVKITPVPSKK
Disordered region (IsUnstruct)
*****AIQDVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSA****************************************************************QLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVT************GGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSA******************************************************************
Disordered Region (DISOPRED)
********DVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAH*****************************************************NKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVT**************RCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYS*******************************************************************
Disordered Region (DISEMBL)
MFGSAAIQDVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAH*****************TDPMLKPLKINDEITIIPQ******************KVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQ*********GRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAH*****************TDPMLKPLKINDEITIIPQ*****************************
Disordered Region (DISPRO)
*FGSAAIQDVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHS********************LKPLKINDEITIIPQPPR***************KVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSA*********************MLKPLKINDEITIIPQPP***************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFGSAAIQDVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSSNNNKVKITPVPSKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	306	2.2.26 [Sep-21-2011]
Q61SK8	880	MOG interacting and ectop	N/A	N/A	0.385	0.134	0.4	9e-23
Q21502	870	MOG interacting and ectop	yes	N/A	0.428	0.150	0.375	1e-22

>sp|Q61SK8|MEP1_CAEBR MOG interacting and ectopic P-granules protein 1 OS=Caenorhabditis briggsae GN=mep-1 PE=3 SV=2

 Score =  107 bits (268), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 70/120 (58%), Gaps = 2/120 (1%)

Query: 124 NHMQWIHKVKIHPKM--IYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANK 181
           +H+Q +HK  +   +  +    PL C +C+ RF+T +GLERHL+ SHGLVT+ +   A K
Sbjct: 745 SHLQVLHKQMVGKTLQDMTQGAPLACSRCRDRFWTYEGLERHLVMSHGLVTADLLLKAQK 804

Query: 182 GKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAH 241
            +DGGRC  CG+ Y + +L H+  DH + L  A + Y C VC      Y+  E H+ S H
Sbjct: 805 KEDGGRCKTCGKQYAFNMLQHLVADHQVKLCSAEIMYSCDVCAFKCSSYQTLEAHLSSTH 864

Has a broad role in development, specifically in the genetic pathway SynMuvB that negatively regulates specification of the vulval cell fate. Required for fem-3 3'-UTR-mediated repression in the regulation of the sperm/oocyte switch. Acts by regulating the translation of fem-3 mRNA, by binding to its 3'-UTR.
Caenorhabditis briggsae (taxid: 6238)

>sp|Q21502|MEP1_CAEEL MOG interacting and ectopic P-granules protein 1 OS=Caenorhabditis elegans GN=mep-1 PE=1 SV=2

 Score =  107 bits (267), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 74/133 (55%), Gaps = 2/133 (1%)

Query: 120 EQLRNHMQWIHKVKIHPKM--IYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 177
           E+   H+Q  HK  +   +  +    PL C +C+ RF+T +GLERHL+ SHGLVT+ +  
Sbjct: 726 EKYLQHLQTTHKQMVGKVLQDMSQGAPLACSRCRDRFWTYEGLERHLVMSHGLVTADLLL 785

Query: 178 AANKGKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHV 237
            A K +DGGRC  CG+ Y + +L H+  DH + L  A + Y C VC      Y+  E H+
Sbjct: 786 KAQKKEDGGRCKTCGKNYAFNMLQHLVADHQVKLCSAEIMYSCDVCAFKCSSYQTLEAHL 845

Query: 238 YSAHSVAPRRPAT 250
            S H    ++ +T
Sbjct: 846 TSNHPKGDKKTST 858

Has a broad role in development, specifically in the genetic pathway SynMuvB that negatively regulates specification of the vulval cell fate. Required for fem-3 3'-UTR-mediated repression in the regulation of the sperm/oocyte switch. Acts by regulating the translation of fem-3 mRNA, by binding to its 3'-UTR.

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	306
332024411	1148	MOG interacting and ectopic P-granules p	0.552	0.147	0.84	1e-85
307200554	1026	MOG interacting and ectopic P-granules p	0.555	0.165	0.829	6e-85
357628298	860	hypothetical protein KGM_14415 [Danaus p	0.643	0.229	0.728	3e-84
383864390	1125	PREDICTED: uncharacterized protein LOC10	0.555	0.151	0.840	7e-84
322802248	239	hypothetical protein SINV_01034 [Solenop	0.552	0.707	0.84	1e-83
307181772	1110	MOG interacting and ectopic P-granules p	0.653	0.180	0.690	2e-83
91080107	961	PREDICTED: similar to CG1244 CG1244-PA [	0.542	0.172	0.843	2e-83
270003192	966	hypothetical protein TcasGA2_TC002395 [T	0.542	0.171	0.843	2e-83
380019412	1119	PREDICTED: uncharacterized protein LOC10	0.555	0.151	0.835	2e-83
328790895	1119	PREDICTED: hypothetical protein LOC40971	0.555	0.151	0.835	2e-83

>gi|332024411|gb|EGI64609.1| MOG interacting and ectopic P-granules protein 1 [Acromyrmex echinatior]

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 147/175 (84%), Positives = 154/175 (88%), Gaps = 6/175 (3%)

Query: 118  DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 177
            DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE
Sbjct: 969  DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 1028

Query: 178  AANKGKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHV 237
            AANKGKD GRCP CGRVYQWKLLNHVARDH M+LKPAHLSYKCTVCTATFGMY+QFENHV
Sbjct: 1029 AANKGKDAGRCPACGRVYQWKLLNHVARDHGMTLKPAHLSYKCTVCTATFGMYKQFENHV 1088

Query: 238  YSAHSVAPRRPATDKK-----PQGQSTDPMLKPLKINDEITIIPQPPRPTASSSS 287
            YSAHSV  +R   DKK     P  +S D +LKPLKINDEITIIPQP +PT  S +
Sbjct: 1089 YSAHSVVAKR-VMDKKNTPASPSSRSNDSLLKPLKINDEITIIPQPAKPTTRSGA 1142

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307200554|gb|EFN80706.1| MOG interacting and ectopic P-granules protein 1 [Harpegnathos saltator]

 Score =  320 bits (819), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 146/176 (82%), Positives = 155/176 (88%), Gaps = 6/176 (3%)

Query: 118  DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 177
            DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQ+
Sbjct: 847  DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQD 906

Query: 178  AANKGKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHV 237
            AANKGKD GRCP CGRVYQWKLLNHVARDH M+LKPAHLSYKCTVCTATFGMY+QFENHV
Sbjct: 907  AANKGKDAGRCPSCGRVYQWKLLNHVARDHGMTLKPAHLSYKCTVCTATFGMYKQFENHV 966

Query: 238  YSAHSVAPRRPATDKK-----PQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSS 288
            YSAHSV  +R   DKK     P  +S D +LKPLKINDEITIIPQP +PT  S ++
Sbjct: 967  YSAHSVVAKR-VMDKKNAPASPSSRSNDSLLKPLKINDEITIIPQPAKPTTRSGAT 1021

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357628298|gb|EHJ77687.1| hypothetical protein KGM_14415 [Danaus plexippus]

 Score =  318 bits (814), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 150/206 (72%), Positives = 170/206 (82%), Gaps = 9/206 (4%)

Query: 88  ITIIPQPPRPTASSSSSTSSSNNNKVKI----TPDLEQLRNHMQWIHKVKIHPKMIYNRP 143
           IT +P+ P+P++S+S+  S +     +I      DLEQLRNHMQWIHKVKIHPKMIYNRP
Sbjct: 649 ITPLPRAPQPSSSNSTHNSKATFVICEICDGYIKDLEQLRNHMQWIHKVKIHPKMIYNRP 708

Query: 144 PLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWKLLNHV 203
           PLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKD GRCPVCGRVYQWKLLNHV
Sbjct: 709 PLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDAGRCPVCGRVYQWKLLNHV 768

Query: 204 ARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKK-----PQGQS 258
           +RDHNM+LKPAHLSYKCTVCTATFGMY+QFENHVYSAHSV  +R     K      +   
Sbjct: 769 SRDHNMTLKPAHLSYKCTVCTATFGMYKQFENHVYSAHSVVAKRVIDKNKTTPPTAKPSE 828

Query: 259 TDPMLKPLKINDEITIIPQPPRPTAS 284
           +DP+LKPLKI+DEITIIPQP + + +
Sbjct: 829 SDPLLKPLKISDEITIIPQPAKSSVT 854

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864390|ref|XP_003707662.1| PREDICTED: uncharacterized protein LOC100877073 [Megachile rotundata]

 Score =  316 bits (810), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 148/176 (84%), Positives = 155/176 (88%), Gaps = 6/176 (3%)

Query: 118  DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 177
            DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE
Sbjct: 946  DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 1005

Query: 178  AANKGKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHV 237
            AANKGKD GRCP CGRVYQWKLLNHVARDH M+LKPAHLSYKCTVCTATFGMY+QFENHV
Sbjct: 1006 AANKGKDAGRCPACGRVYQWKLLNHVARDHGMTLKPAHLSYKCTVCTATFGMYKQFENHV 1065

Query: 238  YSAHSVAPRRPATDKK-----PQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSS 288
            YSAHSV  +R   DKK     P  +S D +LKPLKINDEITIIPQP +PT  S +S
Sbjct: 1066 YSAHSVVAKR-VMDKKNAPSSPSSRSNDSLLKPLKINDEITIIPQPAKPTTRSGAS 1120

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322802248|gb|EFZ22644.1| hypothetical protein SINV_01034 [Solenopsis invicta]

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 147/175 (84%), Positives = 154/175 (88%), Gaps = 6/175 (3%)

Query: 118 DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 177
           DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE
Sbjct: 60  DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 119

Query: 178 AANKGKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHV 237
           AANKGKD GRCP CGRVYQWKLLNHVARDH M+LKPAHLSYKCTVCTATFGMY+QFENHV
Sbjct: 120 AANKGKDAGRCPACGRVYQWKLLNHVARDHGMTLKPAHLSYKCTVCTATFGMYKQFENHV 179

Query: 238 YSAHSVAPRRPATDKK-----PQGQSTDPMLKPLKINDEITIIPQPPRPTASSSS 287
           YSAHSV  +R   DKK     P  +S D +LKPLKINDEITIIPQP +PT  S +
Sbjct: 180 YSAHSVVAKR-VMDKKNAPASPSSRSNDSLLKPLKINDEITIIPQPAKPTTRSGA 233

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307181772|gb|EFN69224.1| MOG interacting and ectopic P-granules protein 1 [Camponotus floridanus]

 Score =  315 bits (807), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 156/226 (69%), Positives = 170/226 (75%), Gaps = 26/226 (11%)

Query: 88   ITIIPQPPRPTASSSSSTSSSNNNKVKIT-----------PDLEQLRNHMQWIHKVKIHP 136
            I+I P P   + +S   T +S+ +  K T            DLEQLRNHMQWIHKVKIHP
Sbjct: 881  ISITPLPRTTSQTSIPGTGTSSKSGGKNTFVICEICDGYIKDLEQLRNHMQWIHKVKIHP 940

Query: 137  KMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGR--- 193
            KMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKD GRCP CGR   
Sbjct: 941  KMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDAGRCPACGRGSF 1000

Query: 194  ------VYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRR 247
                  VYQWKLLNHVARDH M+LKPAHLSYKCTVCTATFGMY+QFENHVYSAHSV  +R
Sbjct: 1001 YIFFFQVYQWKLLNHVARDHGMTLKPAHLSYKCTVCTATFGMYKQFENHVYSAHSVVAKR 1060

Query: 248  PATDKK-----PQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSS 288
               DKK     P  +S D +LKPLKINDEITIIPQP +PT  S ++
Sbjct: 1061 -VMDKKNAPASPSSRSNDSLLKPLKINDEITIIPQPAKPTTRSGAT 1105

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91080107|ref|XP_967072.1| PREDICTED: similar to CG1244 CG1244-PA [Tribolium castaneum]

 Score =  315 bits (807), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 140/166 (84%), Positives = 147/166 (88%)

Query: 118 DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 177
           DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQ+
Sbjct: 771 DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQD 830

Query: 178 AANKGKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHV 237
           AANK KD GRCPVCGRVYQWKLLNHVARDH+M+LKPAHLSYKCTVCTATFGMY+QFENHV
Sbjct: 831 AANKSKDAGRCPVCGRVYQWKLLNHVARDHSMTLKPAHLSYKCTVCTATFGMYKQFENHV 890

Query: 238 YSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTA 283
           YSAHSV  +R    K       D M+KPLKINDEITIIPQP +  A
Sbjct: 891 YSAHSVVAKRVMDKKNSSSSKNDQMMKPLKINDEITIIPQPAKVAA 936

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270003192|gb|EEZ99639.1| hypothetical protein TcasGA2_TC002395 [Tribolium castaneum]

 Score =  315 bits (807), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 140/166 (84%), Positives = 147/166 (88%)

Query: 118 DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 177
           DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQ+
Sbjct: 776 DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQD 835

Query: 178 AANKGKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHV 237
           AANK KD GRCPVCGRVYQWKLLNHVARDH+M+LKPAHLSYKCTVCTATFGMY+QFENHV
Sbjct: 836 AANKSKDAGRCPVCGRVYQWKLLNHVARDHSMTLKPAHLSYKCTVCTATFGMYKQFENHV 895

Query: 238 YSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTA 283
           YSAHSV  +R    K       D M+KPLKINDEITIIPQP +  A
Sbjct: 896 YSAHSVVAKRVMDKKNSSSSKNDQMMKPLKINDEITIIPQPAKVAA 941

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380019412|ref|XP_003693601.1| PREDICTED: uncharacterized protein LOC100866805 [Apis florea]

 Score =  315 bits (806), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 147/176 (83%), Positives = 155/176 (88%), Gaps = 6/176 (3%)

Query: 118  DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 177
            DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE
Sbjct: 940  DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 999

Query: 178  AANKGKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHV 237
            AAN+GKD GRCP CGRVYQWKLLNHVARDH M+LKPAHLSYKCTVCTATFGMY+QFENHV
Sbjct: 1000 AANRGKDAGRCPACGRVYQWKLLNHVARDHGMTLKPAHLSYKCTVCTATFGMYKQFENHV 1059

Query: 238  YSAHSVAPRRPATDKK-----PQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSS 288
            YSAHSV  +R   DKK     P  +S D +LKPLKINDEITIIPQP +PT  S +S
Sbjct: 1060 YSAHSVVAKR-VMDKKNTPSSPSSRSNDSLLKPLKINDEITIIPQPAKPTTRSGTS 1114

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328790895|ref|XP_393215.4| PREDICTED: hypothetical protein LOC409717 [Apis mellifera]

 Score =  315 bits (806), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 147/176 (83%), Positives = 155/176 (88%), Gaps = 6/176 (3%)

Query: 118  DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 177
            DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE
Sbjct: 940  DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 999

Query: 178  AANKGKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHV 237
            AAN+GKD GRCP CGRVYQWKLLNHVARDH M+LKPAHLSYKCTVCTATFGMY+QFENHV
Sbjct: 1000 AANRGKDAGRCPACGRVYQWKLLNHVARDHGMTLKPAHLSYKCTVCTATFGMYKQFENHV 1059

Query: 238  YSAHSVAPRRPATDKK-----PQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSS 288
            YSAHSV  +R   DKK     P  +S D +LKPLKINDEITIIPQP +PT  S +S
Sbjct: 1060 YSAHSVVAKR-VMDKKNTPSSPSSRSNDSLLKPLKINDEITIIPQPAKPTTRSGTS 1114

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	306
FB|FBgn0035357	1152	MEP-1 [Drosophila melanogaster	0.464	0.123	0.852	8.4e-77
WB|WBGene00003218	870	mep-1 [Caenorhabditis elegans	0.437	0.154	0.375	2.6e-24
UNIPROTKB|Q21502	870	mep-1 "MOG interacting and ect	0.437	0.154	0.375	2.6e-24
UNIPROTKB|Q61SK8	880	mep-1 "MOG interacting and ect	0.415	0.144	0.388	3.5e-24
ZFIN|ZDB-GENE-041111-214	1431	znf687b "zinc finger protein 6	0.447	0.095	0.240	0.00023
UNIPROTKB|F1LTH0	602	F1LTH0 "Uncharacterized protei	0.333	0.169	0.275	0.00034
FB|FBgn0039740	457	CG7928 [Drosophila melanogaste	0.316	0.212	0.293	0.00068

FB|FBgn0035357 MEP-1 [Drosophila melanogaster (taxid:7227)]

 Score = 687 (246.9 bits), Expect = 8.4e-77, Sum P(3) = 8.4e-77
 Identities = 121/142 (85%), Positives = 130/142 (91%)

Query:   118 DLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 177
             DLEQLRNHMQW+HKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE
Sbjct:   960 DLEQLRNHMQWMHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 1019

Query:   178 AANKGKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHV 237
             AANKGKD GRCPVCGR+YQWKLLNHV+RDH+M+LKPAHLSYKCTVCTATFGMY+QFE HV
Sbjct:  1020 AANKGKDAGRCPVCGRMYQWKLLNHVSRDHHMTLKPAHLSYKCTVCTATFGMYKQFETHV 1079

Query:   238 YSAHSVAPRRPATDKKPQGQST 259
             Y+AHS   R+    KK   QS+
Sbjct:  1080 YTAHSTVARKAMDSKKNSAQSS 1101

GO:0008270 "zinc ion binding" evidence=IEA

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA

GO:0003682 "chromatin binding" evidence=IDA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005700 "polytene chromosome" evidence=IDA

GO:0016581 "NuRD complex" evidence=IPI

WB|WBGene00003218 mep-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 262 (97.3 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
 Identities = 51/136 (37%), Positives = 75/136 (55%)

Query:   120 EQLRNHMQWIHKVKIHPKM--IYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 177
             E+   H+Q  HK  +   +  +    PL C +C+ RF+T +GLERHL+ SHGLVT+ +  
Sbjct:   726 EKYLQHLQTTHKQMVGKVLQDMSQGAPLACSRCRDRFWTYEGLERHLVMSHGLVTADLLL 785

Query:   178 AANKGKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHV 237
              A K +DGGRC  CG+ Y + +L H+  DH + L  A + Y C VC      Y+  E H+
Sbjct:   786 KAQKKEDGGRCKTCGKNYAFNMLQHLVADHQVKLCSAEIMYSCDVCAFKCSSYQTLEAHL 845

Query:   238 YSAHSVAPRRPATDKK 253
              S H    ++ +T  K
Sbjct:   846 TSNHPKGDKKTSTPAK 861

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0040027 "negative regulation of vulval development" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0002009 "morphogenesis of an epithelium" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0006915 "apoptotic process" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0003723 "RNA binding" evidence=IDA

GO:0048599 "oocyte development" evidence=IMP

GO:0008406 "gonad development" evidence=IMP

GO:0040025 "vulval development" evidence=IMP

GO:0010468 "regulation of gene expression" evidence=IMP

UNIPROTKB|Q21502 mep-1 "MOG interacting and ectopic P-granules protein 1" [Caenorhabditis elegans (taxid:6239)]

 Score = 262 (97.3 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
 Identities = 51/136 (37%), Positives = 75/136 (55%)

Query:   120 EQLRNHMQWIHKVKIHPKM--IYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQE 177
             E+   H+Q  HK  +   +  +    PL C +C+ RF+T +GLERHL+ SHGLVT+ +  
Sbjct:   726 EKYLQHLQTTHKQMVGKVLQDMSQGAPLACSRCRDRFWTYEGLERHLVMSHGLVTADLLL 785

Query:   178 AANKGKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHV 237
              A K +DGGRC  CG+ Y + +L H+  DH + L  A + Y C VC      Y+  E H+
Sbjct:   786 KAQKKEDGGRCKTCGKNYAFNMLQHLVADHQVKLCSAEIMYSCDVCAFKCSSYQTLEAHL 845

Query:   238 YSAHSVAPRRPATDKK 253
              S H    ++ +T  K
Sbjct:   846 TSNHPKGDKKTSTPAK 861

GO:0042802 "identical protein binding" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

GO:0042826 "histone deacetylase binding" evidence=IPI

GO:0008134 "transcription factor binding" evidence=IPI

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0017151 "DEAD/H-box RNA helicase binding" evidence=IPI

UNIPROTKB|Q61SK8 mep-1 "MOG interacting and ectopic P-granules protein 1" [Caenorhabditis briggsae (taxid:6238)]

 Score = 261 (96.9 bits), Expect = 3.5e-24, Sum P(2) = 3.5e-24
 Identities = 52/134 (38%), Positives = 77/134 (57%)

Query:   124 NHMQWIHKVKIHPKM--IYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANK 181
             +H+Q +HK  +   +  +    PL C +C+ RF+T +GLERHL+ SHGLVT+ +   A K
Sbjct:   745 SHLQVLHKQMVGKTLQDMTQGAPLACSRCRDRFWTYEGLERHLVMSHGLVTADLLLKAQK 804

Query:   182 GKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAH 241
              +DGGRC  CG+ Y + +L H+  DH + L  A + Y C VC      Y+  E H+ S H
Sbjct:   805 KEDGGRCKTCGKQYAFNMLQHLVADHQVKLCSAEIMYSCDVCAFKCSSYQTLEAHLSSTH 864

Query:   242 SVAPRRPATDKKPQ 255
                P+  + DKK +
Sbjct:   865 ---PK--SADKKKE 873

GO:0002119 "nematode larval development" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0008134 "transcription factor binding" evidence=ISS

GO:0017151 "DEAD/H-box RNA helicase binding" evidence=ISS

GO:0040035 "hermaphrodite genitalia development" evidence=ISS

GO:0042826 "histone deacetylase binding" evidence=ISS

ZFIN|ZDB-GENE-041111-214 znf687b "zinc finger protein 687b" [Danio rerio (taxid:7955)]

 Score = 110 (43.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
 Identities = 37/154 (24%), Positives = 64/154 (41%)

Query:   129 IHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRC 188
             ++ +K H +  +      C  C   F + Q  + H+   H  +T++  +   K      C
Sbjct:   931 LNSIKSHIQTAHCEVFHKCPNCPMAFKSAQSAQGHITSQHPALTAAQAKMIYK------C 984

Query:   189 PVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAH---SVAP 245
              +C  V+  K L ++  D +++ +  H+ +KC  CT  +        H+ +AH   SV  
Sbjct:   985 VMCDTVFTQKPLLYMHFDTHLAKQKVHV-FKCPDCTKLYAQKGSMMEHIKTAHRGLSVKA 1043

Query:   246 RRPATDKKP----QGQSTDPMLKPLKIN--DEIT 273
               P T   P     G ST    KP   N  DE++
Sbjct:  1044 ETPPTTSSPVSAPAGNSTSKP-KPATENNSDELS 1076

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1LTH0 F1LTH0 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 108 (43.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
 Identities = 30/109 (27%), Positives = 47/109 (43%)

Query:   135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRV 194
             H K  + +    CQ+C+  F     L +H       +T       + G    +CPVC R 
Sbjct:   352 HRKTHFAKTVFECQECRKLFNRRSSLIKHQASRRTALTE--HHRVHSGFRPHQCPVCPR- 408

Query:   195 YQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSV 243
              ++   +H+ R H +S     L + C  C  TFG   Q E H Y +H++
Sbjct:   409 -RFSRPSHLTR-HQLSHAAERL-FGCAKCKETFGHKEQLERH-YKSHTI 453

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

FB|FBgn0039740 CG7928 [Drosophila melanogaster (taxid:7227)]

 Score = 107 (42.7 bits), Expect = 0.00068, Sum P(2) = 0.00068
 Identities = 34/116 (29%), Positives = 54/116 (46%)

Query:   127 QWIHKVKIHP-KMIYNRPP--LNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGK 183
             +++HKV ++  KMI++     L CQ C F+  T   LERH+  SH             G 
Sbjct:   348 RFVHKVALYKHKMIHDSETKRLECQVCGFKTRTKAHLERHMR-SH------------TGD 394

Query:   184 DGGRCPVCGRVYQ--WKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHV 237
                 CPVC + +   + +  H+ R+H       H  + C+ CT TF   + ++ HV
Sbjct:   395 KPFACPVCNKRFSQMYNMKAHL-REHESPGTNRHRRFHCSKCTHTFINEQNYDAHV 449

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	306
KOG2462|consensus	279		99.95
KOG2462|consensus	279		99.91
KOG3608|consensus	467		99.88
KOG1074|consensus	958		99.85
KOG3623|consensus	1007		99.82
KOG3576|consensus	267		99.76
KOG1074|consensus	958		99.75
KOG3608|consensus	467		99.74
KOG3576|consensus	267		99.58
KOG3623|consensus	1007		99.56
PLN03086	567	PRLI-interacting factor K; Provisional	99.25
PLN03086	567	PRLI-interacting factor K; Provisional	99.09
PHA00733	128	hypothetical protein	99.09
KOG3993|consensus	500		98.99
PHA00733	128	hypothetical protein	98.98
KOG3993|consensus	500		98.67
PHA02768	55	hypothetical protein; Provisional	98.63
PHA02768	55	hypothetical protein; Provisional	98.58
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.39
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.34
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.31
PHA00616	44	hypothetical protein	98.28
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.25
PHA00732	79	hypothetical protein	98.19
PHA00732	79	hypothetical protein	98.13
PHA00616	44	hypothetical protein	98.11
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.96
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.87
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.85
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.85
COG5236	493	Uncharacterized conserved protein, contains RING Z	97.75
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.73
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.69
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.65
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.57
KOG2231|consensus	669		97.51
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.51
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.33
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.15
KOG2231|consensus	669		97.07
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.03
KOG1146|consensus	1406		96.89
smart00355	26	ZnF_C2H2 zinc finger.	96.86
smart00355	26	ZnF_C2H2 zinc finger.	96.85
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.7
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.67
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.55
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.54
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.11
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.74
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.69
KOG1146|consensus	1406		95.59
KOG4173|consensus	253		95.5
KOG2482|consensus	423		95.28
PRK04860	160	hypothetical protein; Provisional	95.27
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.39
KOG2482|consensus	423		94.17
PRK04860	160	hypothetical protein; Provisional	93.91
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.79
KOG2186|consensus	276		93.64
KOG2785|consensus	390		93.51
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.31
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.18
COG4049	65	Uncharacterized protein containing archaeal-type C	92.98
KOG4173|consensus	253		92.74
COG4049	65	Uncharacterized protein containing archaeal-type C	91.25
KOG2186|consensus	276		89.39
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	89.09
KOG2785|consensus	390		88.59
KOG2893|consensus	341		88.54
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	88.35
KOG2893|consensus	341		86.96
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	86.25
COG5048	467	FOG: Zn-finger [General function prediction only]	84.1
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	82.37
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	82.14
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	81.76
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	81.04
COG1592	166	Rubrerythrin [Energy production and conversion]	80.79

>KOG2462|consensus

Probab=99.95  E-value=2e-28  Score=200.21  Aligned_cols=135  Identities=23%  Similarity=0.452  Sum_probs=122.2

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCCccccCCccccCCCCCCCCCCCCCCCCCcCCc
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSSNNN  111 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~C~~  111 (306)
                      ..|+|..||+.|.+..+|.+|+++|-.-                                          ...+.+.|++
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHkQ~H~~~------------------------------------------~s~ka~~C~~  166 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHKQTHRSL------------------------------------------DSKKAFSCKY  166 (279)
T ss_pred             Cceeccccccccccccccchhhcccccc------------------------------------------cccccccCCC
Confidence            5799999999999999999999887432                                          1234588899


Q ss_pred             cCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        112 KVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       112 C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      ||+.|....+|+.|++ +|+           -+++|.+|||.|.+.+-|+-|++             +|+|||||.|+.|
T Consensus       167 C~K~YvSmpALkMHir-TH~-----------l~c~C~iCGKaFSRPWLLQGHiR-------------THTGEKPF~C~hC  221 (279)
T KOG2462|consen  167 CGKVYVSMPALKMHIR-THT-----------LPCECGICGKAFSRPWLLQGHIR-------------THTGEKPFSCPHC  221 (279)
T ss_pred             CCceeeehHHHhhHhh-ccC-----------CCcccccccccccchHHhhcccc-------------cccCCCCccCCcc
Confidence            9999999999999997 665           37999999999999999999999             8899999999999


Q ss_pred             hhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhh
Q psy16775        192 GRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYS  239 (306)
Q Consensus       192 ~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~  239 (306)
                      +++|...  |+.|| ..|.     +.|.|+|..|+++|...+.|.+|...
T Consensus       222 ~kAFADRSNLRAHm-QTHS-----~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  222 GKAFADRSNLRAHM-QTHS-----DVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             cchhcchHHHHHHH-Hhhc-----CCccccCcchhhHHHHHHHHHHhhhh
Confidence            9999998  99999 7787     77889999999999999999999865

>KOG2462|consensus

Probab=99.91  E-value=3.4e-25  Score=181.33  Aligned_cols=129  Identities=19%  Similarity=0.373  Sum_probs=116.0

Q ss_pred             chhHHHHHHHH--HHHHHHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCC
Q psy16775          2 FGSAAIQDVYQ--WKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPML   79 (306)
Q Consensus         2 ~~~~~~~~~~~--~~l~~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~   79 (306)
                      |-|.+||+.|.  +.|.+|. ..|..-.  +.+.+.|..||+.|.+...|..|+++|...                    
T Consensus       131 ~~c~eCgk~ysT~snLsrHk-Q~H~~~~--s~ka~~C~~C~K~YvSmpALkMHirTH~l~--------------------  187 (279)
T KOG2462|consen  131 YKCPECGKSYSTSSNLSRHK-QTHRSLD--SKKAFSCKYCGKVYVSMPALKMHIRTHTLP--------------------  187 (279)
T ss_pred             eeccccccccccccccchhh-ccccccc--ccccccCCCCCceeeehHHHhhHhhccCCC--------------------
Confidence            56899999994  5799999 7787543  348899999999999999999999998542                    


Q ss_pred             CccccCCccccCCCCCCCCCCCCCCCCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHH
Q psy16775         80 KPLKINDEITIIPQPPRPTASSSSSTSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQG  159 (306)
Q Consensus        80 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~  159 (306)
                                                 ++|.+||+.|...--|+-|++ .|+         ||+||.|+.|+++|..+++
T Consensus       188 ---------------------------c~C~iCGKaFSRPWLLQGHiR-THT---------GEKPF~C~hC~kAFADRSN  230 (279)
T KOG2462|consen  188 ---------------------------CECGICGKAFSRPWLLQGHIR-THT---------GEKPFSCPHCGKAFADRSN  230 (279)
T ss_pred             ---------------------------cccccccccccchHHhhcccc-ccc---------CCCCccCCcccchhcchHH
Confidence                                       667799999999999999997 776         9999999999999999999


Q ss_pred             HHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHH
Q psy16775        160 LERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHV  203 (306)
Q Consensus       160 l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~  203 (306)
                      |+.||+             +|.+.|+|+|..|++.|...  |.+|.
T Consensus       231 LRAHmQ-------------THS~~K~~qC~~C~KsFsl~SyLnKH~  263 (279)
T KOG2462|consen  231 LRAHMQ-------------THSDVKKHQCPRCGKSFALKSYLNKHS  263 (279)
T ss_pred             HHHHHH-------------hhcCCccccCcchhhHHHHHHHHHHhh
Confidence            999999             88999999999999999998  89987

>KOG3608|consensus

Probab=99.88  E-value=3.5e-23  Score=173.84  Aligned_cols=189  Identities=15%  Similarity=0.296  Sum_probs=153.2

Q ss_pred             HHHHHHH--HHHHHHHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCCcc
Q psy16775          5 AAIQDVY--QWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPL   82 (306)
Q Consensus         5 ~~~~~~~--~~~l~~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~~~   82 (306)
                      ++|-.++  ++.|++|+ +.|.++     |...|+.||.-|.++..|..|++....-                  ...+|
T Consensus       183 ~~Ct~~~~~k~~LreH~-r~Hs~e-----KvvACp~Cg~~F~~~tkl~DH~rRqt~l------------------~~n~f  238 (467)
T KOG3608|consen  183 AMCTKHMGNKYRLREHI-RTHSNE-----KVVACPHCGELFRTKTKLFDHLRRQTEL------------------NTNSF  238 (467)
T ss_pred             hhhhhhhccHHHHHHHH-HhcCCC-----eEEecchHHHHhccccHHHHHHHhhhhh------------------cCCch
Confidence            3455555  67899999 999988     9999999999999999999999875432                  22366


Q ss_pred             ccCCccccCCCCCCCCCC-CCCCCCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHH
Q psy16775         83 KINDEITIIPQPPRPTAS-SSSSTSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLE  161 (306)
Q Consensus        83 ~c~~~~~~~~~~~~~~~~-~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~  161 (306)
                      .|..|...+...+....+ .+....|+|+.|+......+.|..|++..|.         .++||+|+.|++.|.+.++|.
T Consensus       239 qC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs---------~dkpfKCd~Cd~~c~~esdL~  309 (467)
T KOG3608|consen  239 QCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHS---------KDKPFKCDECDTRCVRESDLA  309 (467)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHHHHHHHhhhc---------cCCCccccchhhhhccHHHHH
Confidence            666666665443222111 2223469999999999999999999999998         899999999999999999999


Q ss_pred             hHhhhccCCcchhhHHhhhcCCCCcCCCc--chhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhH
Q psy16775        162 RHLLGSHGLVTSSMQEAANKGKDGGRCPV--CGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHV  237 (306)
Q Consensus       162 ~H~~~~h~~~~~~~~~~~h~~~~~~~C~~--C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~  237 (306)
                      +|+.             +|. +..|.|+.  |..+|.+.  |++|++.+|.+..   .-+|.|-.|++.|++-.+|.+|+
T Consensus       310 kH~~-------------~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~n---p~~Y~CH~Cdr~ft~G~~L~~HL  372 (467)
T KOG3608|consen  310 KHVQ-------------VHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNN---PILYACHCCDRFFTSGKSLSAHL  372 (467)
T ss_pred             HHHH-------------hcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCC---CCceeeecchhhhccchhHHHHH
Confidence            9999             677 67899988  99999998  9999977774332   23799999999999999999998


Q ss_pred             hhhcCC
Q psy16775        238 YSAHSV  243 (306)
Q Consensus       238 ~~hh~~  243 (306)
                      ..-|+-
T Consensus       373 ~kkH~f  378 (467)
T KOG3608|consen  373 MKKHGF  378 (467)
T ss_pred             HHhhcc
Confidence            776654

>KOG1074|consensus

Probab=99.85  E-value=1.3e-21  Score=180.53  Aligned_cols=55  Identities=25%  Similarity=0.521  Sum_probs=50.3

Q ss_pred             cCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcCCCCC
Q psy16775        186 GRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPR  246 (306)
Q Consensus       186 ~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~  246 (306)
                      ..|.+||+.|...  |..|+ +.|+     |+|||.|.+|++.|..+.+|+.||.+|+...+.
T Consensus       880 h~C~vCgk~FsSSsALqiH~-rTHt-----g~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~  936 (958)
T KOG1074|consen  880 HVCNVCGKQFSSSAALEIHM-RTHT-----GPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPP  936 (958)
T ss_pred             hhhccchhcccchHHHHHhh-hcCC-----CCCCccchhhhhhhhhhhhhhhhhccccccCCC
Confidence            4599999999987  99999 8898     999999999999999999999999998876543

>KOG3623|consensus

Probab=99.82  E-value=1e-20  Score=172.10  Aligned_cols=80  Identities=23%  Similarity=0.546  Sum_probs=75.5

Q ss_pred             CCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcc
Q psy16775        140 YNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLS  217 (306)
Q Consensus       140 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~  217 (306)
                      +.+.+|.|+.|+|+|...+.|.+|.-             -|+|.+||+|.+|.+.|..+  |..|+ +.|.     |+||
T Consensus       890 te~gmyaCDqCDK~FqKqSSLaRHKY-------------EHsGqRPyqC~iCkKAFKHKHHLtEHk-RLHS-----GEKP  950 (1007)
T KOG3623|consen  890 TEDGMYACDQCDKAFQKQSSLARHKY-------------EHSGQRPYQCIICKKAFKHKHHLTEHK-RLHS-----GEKP  950 (1007)
T ss_pred             CccccchHHHHHHHHHhhHHHHHhhh-------------hhcCCCCcccchhhHhhhhhhhhhhhh-hhcc-----CCCc
Confidence            45678999999999999999999999             77999999999999999999  99999 8898     9999


Q ss_pred             eecCccCcccCCHHHHHhhHh
Q psy16775        218 YKCTVCTATFGMYRQFENHVY  238 (306)
Q Consensus       218 ~~C~~C~~~f~~~~~L~~H~~  238 (306)
                      |+|+.|+++|+...+...||.
T Consensus       951 fQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  951 FQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             chhhhhhhhcccccchHhhhc
Confidence            999999999999999999994

>KOG3576|consensus

Probab=99.76  E-value=5.7e-19  Score=137.88  Aligned_cols=122  Identities=21%  Similarity=0.299  Sum_probs=108.1

Q ss_pred             CCCCCCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhh
Q psy16775        101 SSSSTSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAAN  180 (306)
Q Consensus       101 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h  180 (306)
                      ..+...|.|.+|++.|.....|.+|++ .|.         +.+.|.|..||+.|....+|++|++             +|
T Consensus       112 ssd~d~ftCrvCgK~F~lQRmlnrh~k-ch~---------~vkr~lct~cgkgfndtfdlkrh~r-------------th  168 (267)
T KOG3576|consen  112 SSDQDSFTCRVCGKKFGLQRMLNRHLK-CHS---------DVKRHLCTFCGKGFNDTFDLKRHTR-------------TH  168 (267)
T ss_pred             CCCCCeeeeehhhhhhhHHHHHHHHhh-hcc---------HHHHHHHhhccCcccchhhhhhhhc-------------cc
Confidence            445568999999999999999999998 777         7788999999999999999999999             88


Q ss_pred             cCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCC-----CCCcceecCccCcccCCHHHHHhhHhhhcCCCC
Q psy16775        181 KGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLK-----PAHLSYKCTVCTATFGMYRQFENHVYSAHSVAP  245 (306)
Q Consensus       181 ~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~-----~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~~  245 (306)
                      +|.+||+|..|+++|+..  |..|++.+|.....     ..+|.|.|..||++-.....+..|++.+|...+
T Consensus       169 tgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  169 TGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             cCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            999999999999999999  99999999965321     146789999999999999999999999887544

>KOG1074|consensus

Probab=99.75  E-value=6e-19  Score=163.15  Aligned_cols=87  Identities=22%  Similarity=0.450  Sum_probs=76.3

Q ss_pred             CCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceec
Q psy16775        143 PPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKC  220 (306)
Q Consensus       143 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C  220 (306)
                      -|-+|.+|.+...-++.|+.|.+             +|+|++||+|.+||+.|.++  |+.|| .+|..... -.-.|.|
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyr-------------tHtGERPFkCKiCgRAFtTkGNLkaH~-~vHka~p~-~R~q~Sc  668 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYR-------------THTGERPFKCKICGRAFTTKGNLKAHM-SVHKAKPP-ARVQFSC  668 (958)
T ss_pred             Cccceeeeeecccchhhhhhhhh-------------cccCcCccccccccchhccccchhhcc-cccccCcc-ccccccC
Confidence            46899999999999999999999             88999999999999999999  99999 88853222 2235999


Q ss_pred             C---ccCcccCCHHHHHhhHhhhcCCC
Q psy16775        221 T---VCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       221 ~---~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      +   +|-+.|.....|..|++.|.+..
T Consensus       669 P~~~ic~~kftn~V~lpQhIriH~~~~  695 (958)
T KOG1074|consen  669 PSTFICQKKFTNAVTLPQHIRIHLGGQ  695 (958)
T ss_pred             CchhhhcccccccccccceEEeecCCC
Confidence            9   99999999999999999987543

>KOG3608|consensus

Probab=99.74  E-value=5.7e-19  Score=148.63  Aligned_cols=205  Identities=17%  Similarity=0.236  Sum_probs=151.1

Q ss_pred             HHHHHH--HHHHHHHHHhhcCCC------CCCC-C-cccccC--cccccccCcHHHHHHHHhcCCCCCCCCCCCCCCccc
Q psy16775          6 AIQDVY--QWKLLNHVARDHNMS------LKPA-H-LSYKCT--VCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQ   73 (306)
Q Consensus         6 ~~~~~~--~~~l~~H~~~~H~~~------~~~~-~-~~y~C~--~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~   73 (306)
                      .|++.|  ...|..|+ ..|..-      .-++ + -.+.|.  .|-+.|.++..|.+|++.|.+++...|+.|+..|..
T Consensus       141 dCe~~F~s~~ef~dHV-~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~  219 (467)
T KOG3608|consen  141 DCEREFVSIVEFQDHV-VKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRT  219 (467)
T ss_pred             hcCCcccCHHHHHHHH-HHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhcc
Confidence            455555  34577777 555322      1112 1 236675  599999999999999999999877777776666553


Q ss_pred             ccCCCCCccccCCccccCCCCCCCCCCCCCCCCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccc
Q psy16775         74 STDPMLKPLKINDEITIIPQPPRPTASSSSSTSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFR  153 (306)
Q Consensus        74 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~  153 (306)
                      ..             .++.+.+.-.  .....+|.|..|.+.|.+...|..|+. -|-           .-|+|+.|+.+
T Consensus       220 ~t-------------kl~DH~rRqt--~l~~n~fqC~~C~KrFaTeklL~~Hv~-rHv-----------n~ykCplCdmt  272 (467)
T KOG3608|consen  220 KT-------------KLFDHLRRQT--ELNTNSFQCAQCFKRFATEKLLKSHVV-RHV-----------NCYKCPLCDMT  272 (467)
T ss_pred             cc-------------HHHHHHHhhh--hhcCCchHHHHHHHHHhHHHHHHHHHH-Hhh-----------hcccccccccC
Confidence            21             1111111111  122347999999999999999999997 443           26999999999


Q ss_pred             cCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCc--cCcccCC
Q psy16775        154 FFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTV--CTATFGM  229 (306)
Q Consensus       154 f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~--C~~~f~~  229 (306)
                      ...++.|..|++.            .|..++||+|+.|++.|.+.  |.+|+ ..|+      +-.|.|..  |.+.|.+
T Consensus       273 c~~~ssL~~H~r~------------rHs~dkpfKCd~Cd~~c~~esdL~kH~-~~HS------~~~y~C~h~~C~~s~r~  333 (467)
T KOG3608|consen  273 CSSASSLTTHIRY------------RHSKDKPFKCDECDTRCVRESDLAKHV-QVHS------KTVYQCEHPDCHYSVRT  333 (467)
T ss_pred             CCChHHHHHHHHh------------hhccCCCccccchhhhhccHHHHHHHH-Hhcc------ccceecCCCCCcHHHHH
Confidence            9999999999997            56889999999999999887  99999 6885      22699987  9999999


Q ss_pred             HHHHHhhHhhhcCCC---CCCCCCCCCCCCC
Q psy16775        230 YRQFENHVYSAHSVA---PRRPATDKKPQGQ  257 (306)
Q Consensus       230 ~~~L~~H~~~hh~~~---~~~~~~~~~~~~~  257 (306)
                      ...|++|++.+|.+.   .+.++.+++-+.+
T Consensus       334 ~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~  364 (467)
T KOG3608|consen  334 YTQMRRHFLEVHEGNNPILYACHCCDRFFTS  364 (467)
T ss_pred             HHHHHHHHHHhccCCCCCceeeecchhhhcc
Confidence            999999999998432   3456666655443

>KOG3576|consensus

Probab=99.58  E-value=6.8e-16  Score=120.77  Aligned_cols=117  Identities=19%  Similarity=0.211  Sum_probs=98.9

Q ss_pred             CchhHHHHHHH--HHHHHHHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCC
Q psy16775          1 MFGSAAIQDVY--QWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPM   78 (306)
Q Consensus         1 ~~~~~~~~~~~--~~~l~~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~   78 (306)
                      .|.|..|++.|  +--|.+|| +.|..-     +.|-|..||+.|....+|++|+++|+|.                   
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~-kch~~v-----kr~lct~cgkgfndtfdlkrh~rthtgv-------------------  171 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHL-KCHSDV-----KRHLCTFCGKGFNDTFDLKRHTRTHTGV-------------------  171 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHh-hhccHH-----HHHHHhhccCcccchhhhhhhhccccCc-------------------
Confidence            38899999998  45699999 999987     8999999999999999999999999886                   


Q ss_pred             CCccccCCccccCCCCCCCCCCCCCCCCCcCCccCcCCCChHHHHHHHHHhccccc-cccccCCCCCccccccccccCCh
Q psy16775         79 LKPLKINDEITIIPQPPRPTASSSSSTSSSNNNKVKITPDLEQLRNHMQWIHKVKI-HPKMIYNRPPLNCQKCQFRFFTD  157 (306)
Q Consensus        79 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~-h~~~~~~~~~~~C~~C~~~f~~~  157 (306)
                       +|                         |+|..|++.|.....|..|.+.+|++.. +--....++.|.|..||.+-...
T Consensus       172 -rp-------------------------ykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~  225 (267)
T KOG3576|consen  172 -RP-------------------------YKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERP  225 (267)
T ss_pred             -cc-------------------------cchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCCh
Confidence             22                         5566999999999999999998998431 11111246789999999999999


Q ss_pred             HHHHhHhhhcc
Q psy16775        158 QGLERHLLGSH  168 (306)
Q Consensus       158 ~~l~~H~~~~h  168 (306)
                      ..+..|+..+|
T Consensus       226 e~~~~h~~~~h  236 (267)
T KOG3576|consen  226 EVYYLHLKLHH  236 (267)
T ss_pred             hHHHHHHHhcC
Confidence            99999999766

>KOG3623|consensus

Probab=99.56  E-value=1.7e-15  Score=138.46  Aligned_cols=119  Identities=22%  Similarity=0.421  Sum_probs=99.0

Q ss_pred             CCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcch-hhHHhhhcCCC
Q psy16775        106 SSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTS-SMQEAANKGKD  184 (306)
Q Consensus       106 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~-~~~~~~h~~~~  184 (306)
                      ...|++|++.+.....|+.|++..|.+        .+..|.|..|.++|..+..|.+||.+|...-.. ..+ ..-...+
T Consensus       210 lltcpycdrgykrltslkeHikyrhek--------ne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sl-tqsa~lR  280 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEK--------NEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISL-TQSALLR  280 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhh--------CCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccc-cchhhhc
Confidence            578999999999999999999987762        567899999999999999999999976521110 000 0011246


Q ss_pred             CcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhh
Q psy16775        185 GGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYS  239 (306)
Q Consensus       185 ~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~  239 (306)
                      .|+|..||+.|..+  |+.|+ ++|.     |+|||.|+.|+++|+...++.-||-.
T Consensus       281 KFKCtECgKAFKfKHHLKEHl-RIHS-----GEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  281 KFKCTECGKAFKFKHHLKEHL-RIHS-----GEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             cccccccchhhhhHHHHHhhh-eeec-----CCCCcCCcccccccccCCcccccccc
Confidence            89999999999999  99999 9998     99999999999999999999999854

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.25  E-value=7.8e-12  Score=115.17  Aligned_cols=102  Identities=17%  Similarity=0.346  Sum_probs=84.2

Q ss_pred             CCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCC
Q psy16775        106 SSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDG  185 (306)
Q Consensus       106 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~  185 (306)
                      .+.|+.|++.|. ...|..|++.+|.            ++.|+ |++.+ .+..|..|+.             +|-..++
T Consensus       453 H~~C~~Cgk~f~-~s~LekH~~~~Hk------------pv~Cp-Cg~~~-~R~~L~~H~~-------------thCp~Kp  504 (567)
T PLN03086        453 HVHCEKCGQAFQ-QGEMEKHMKVFHE------------PLQCP-CGVVL-EKEQMVQHQA-------------STCPLRL  504 (567)
T ss_pred             CccCCCCCCccc-hHHHHHHHHhcCC------------CccCC-CCCCc-chhHHHhhhh-------------ccCCCCc
Confidence            478999999996 6889999985554            89999 99755 6799999998             7788999


Q ss_pred             cCCCcchhhhH-----------HH-HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        186 GRCPVCGRVYQ-----------WK-LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       186 ~~C~~C~~~f~-----------~~-l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      +.|..|++.|.           .. |..|. ..+      |.+++.|..||+.|.. ..|..|+...|..
T Consensus       505 i~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE-~~C------G~rt~~C~~Cgk~Vrl-rdm~~H~~~~h~~  566 (567)
T PLN03086        505 ITCRFCGDMVQAGGSAMDVRDRLRGMSEHE-SIC------GSRTAPCDSCGRSVML-KEMDIHQIAVHQK  566 (567)
T ss_pred             eeCCCCCCccccCccccchhhhhhhHHHHH-Hhc------CCcceEccccCCeeee-hhHHHHHHHhhcC
Confidence            99999999984           22 99998 554      6778999999998865 5688998877754

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.09  E-value=1.6e-10  Score=106.70  Aligned_cols=103  Identities=20%  Similarity=0.284  Sum_probs=84.8

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCCccccCCccccCCCCCCCCCCCCCCCCCcCCc
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSSNNN  111 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~C~~  111 (306)
                      ..+.|+.|++.|. ...|..|++++|.                                               ++.|+ 
T Consensus       452 ~H~~C~~Cgk~f~-~s~LekH~~~~Hk-----------------------------------------------pv~Cp-  482 (567)
T PLN03086        452 NHVHCEKCGQAFQ-QGEMEKHMKVFHE-----------------------------------------------PLQCP-  482 (567)
T ss_pred             cCccCCCCCCccc-hHHHHHHHHhcCC-----------------------------------------------CccCC-
Confidence            5678999999885 6788899887652                                               27788 


Q ss_pred             cCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccC----------ChHHHHhHhhhccCCcchhhHHhhhc
Q psy16775        112 KVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFF----------TDQGLERHLLGSHGLVTSSMQEAANK  181 (306)
Q Consensus       112 C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~----------~~~~l~~H~~~~h~~~~~~~~~~~h~  181 (306)
                      ||..+ ....|..|+. .|.         ..+++.|+.|++.|.          ....|..|..             + -
T Consensus       483 Cg~~~-~R~~L~~H~~-thC---------p~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~-------------~-C  537 (567)
T PLN03086        483 CGVVL-EKEQMVQHQA-STC---------PLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHES-------------I-C  537 (567)
T ss_pred             CCCCc-chhHHHhhhh-ccC---------CCCceeCCCCCCccccCccccchhhhhhhHHHHHH-------------h-c
Confidence            99755 6689999986 676         889999999999995          2458899988             4 3


Q ss_pred             CCCCcCCCcchhhhHHH-HHHHHHhhcC
Q psy16775        182 GKDGGRCPVCGRVYQWK-LLNHVARDHN  208 (306)
Q Consensus       182 ~~~~~~C~~C~~~f~~~-l~~H~~~~H~  208 (306)
                      +.+++.|..||+.+... |..|+...|.
T Consensus       538 G~rt~~C~~Cgk~Vrlrdm~~H~~~~h~  565 (567)
T PLN03086        538 GSRTAPCDSCGRSVMLKEMDIHQIAVHQ  565 (567)
T ss_pred             CCcceEccccCCeeeehhHHHHHHHhhc
Confidence            78999999999999999 9999977774

>PHA00733 hypothetical protein

Probab=99.09  E-value=5.9e-11  Score=89.73  Aligned_cols=85  Identities=22%  Similarity=0.320  Sum_probs=68.2

Q ss_pred             CCCCccccccccccCChHHHHhH--hhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCc
Q psy16775        141 NRPPLNCQKCQFRFFTDQGLERH--LLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHL  216 (306)
Q Consensus       141 ~~~~~~C~~C~~~f~~~~~l~~H--~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k  216 (306)
                      ..+++.|.+|.+.|.....|..|  +..+.          .+.++++|.|+.||+.|.+.  |..|+ ..|.       .
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~----------~~~~~kPy~C~~Cgk~Fss~s~L~~H~-r~h~-------~   98 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLL----------TSKAVSPYVCPLCLMPFSSSVSLKQHI-RYTE-------H   98 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhc----------ccCCCCCccCCCCCCcCCCHHHHHHHH-hcCC-------c
Confidence            46789999999999888888877  33222          33457899999999999987  89998 5442       2


Q ss_pred             ceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      +|.|..|++.|.+...|.+|+...|+.
T Consensus        99 ~~~C~~CgK~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733         99 SKVCPVCGKEFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             CccCCCCCCccCCHHHHHHHHHHhcCc
Confidence            599999999999999999999988875

>KOG3993|consensus

Probab=98.99  E-value=9.3e-11  Score=101.77  Aligned_cols=128  Identities=20%  Similarity=0.289  Sum_probs=95.1

Q ss_pred             CCCcCCccCcCCCChHHHHHHHH--HhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchh--------
Q psy16775        105 TSSSNNNKVKITPDLEQLRNHMQ--WIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSS--------  174 (306)
Q Consensus       105 ~~~~C~~C~~~f~~~~~l~~H~~--~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~--------  174 (306)
                      +.|.|..|...|.+...|.+|.-  ++|            ..|+|+.|+|.|.-..+|..|.+||-.-....        
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHrC~RIV~------------vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k  333 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHRCPRIVH------------VEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPK  333 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhccCCeeEE------------eeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChh
Confidence            46999999999999999999972  233            26999999999999999999999997422111        


Q ss_pred             -h-------HHhh----hcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCC---------------------------
Q psy16775        175 -M-------QEAA----NKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKP---------------------------  213 (306)
Q Consensus       175 -~-------~~~~----h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~---------------------------  213 (306)
                       .       ++..    ...+..|.|..|++.|.+.  |+.|+..+|......                           
T Consensus       334 ~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a  413 (500)
T KOG3993|consen  334 QAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSA  413 (500)
T ss_pred             hhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhccccccccccccccccc
Confidence             0       0111    0223479999999999998  999984544221100                           


Q ss_pred             -----------------------------------------CCcceecCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        214 -----------------------------------------AHLSYKCTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       214 -----------------------------------------~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                                                               .+..|.|.+|...|....+|.+|+...|...
T Consensus       414 ~~~~g~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hpse  485 (500)
T KOG3993|consen  414 SDSHGDEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPSE  485 (500)
T ss_pred             ccccccceeeeeccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChHH
Confidence                                                     1235899999999999999999998766543

>PHA00733 hypothetical protein

Probab=98.98  E-value=2.4e-10  Score=86.45  Aligned_cols=84  Identities=20%  Similarity=0.370  Sum_probs=67.6

Q ss_pred             CCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCC
Q psy16775        105 TSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKD  184 (306)
Q Consensus       105 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~  184 (306)
                      +++.|.+|.+.|.+...|..+.- ..   .|+.. .++++|.|+.|++.|.+...|..|++             ++  +.
T Consensus        39 ~~~~~~~~~~~~~~~~~l~~~~~-l~---~~~~~-~~~kPy~C~~Cgk~Fss~s~L~~H~r-------------~h--~~   98 (128)
T PHA00733         39 KRLIRAVVKTLIYNPQLLDESSY-LY---KLLTS-KAVSPYVCPLCLMPFSSSVSLKQHIR-------------YT--EH   98 (128)
T ss_pred             hhHHHHHHhhhccChhhhcchHH-HH---hhccc-CCCCCccCCCCCCcCCCHHHHHHHHh-------------cC--Cc
Confidence            56889999999999888888732 11   11111 25789999999999999999999998             43  35


Q ss_pred             CcCCCcchhhhHHH--HHHHHHhhcC
Q psy16775        185 GGRCPVCGRVYQWK--LLNHVARDHN  208 (306)
Q Consensus       185 ~~~C~~C~~~f~~~--l~~H~~~~H~  208 (306)
                      +|.|+.|++.|...  |.+|+...|.
T Consensus        99 ~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         99 SKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CccCCCCCCccCCHHHHHHHHHHhcC
Confidence            79999999999988  9999988775

>KOG3993|consensus

Probab=98.67  E-value=5.2e-09  Score=91.12  Aligned_cols=26  Identities=23%  Similarity=0.501  Sum_probs=21.2

Q ss_pred             CCCcCCCcchhhhHHH--HHHHHHhhcC
Q psy16775        183 KDGGRCPVCGRVYQWK--LLNHVARDHN  208 (306)
Q Consensus       183 ~~~~~C~~C~~~f~~~--l~~H~~~~H~  208 (306)
                      +..|.|.+|...|.+.  |.+|+..-|.
T Consensus       456 ~q~f~~ky~~atfyss~~ltrhin~~Hp  483 (500)
T KOG3993|consen  456 EQGFTCKYCPATFYSSPGLTRHINKCHP  483 (500)
T ss_pred             hhccccccchHhhhcCcchHhHhhhcCh
Confidence            4468899999999887  9999966664

>PHA02768 hypothetical protein; Provisional

Probab=98.63  E-value=1.5e-08  Score=63.33  Aligned_cols=44  Identities=11%  Similarity=0.069  Sum_probs=38.2

Q ss_pred             CCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHH
Q psy16775        106 SSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLE  161 (306)
Q Consensus       106 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~  161 (306)
                      .|.|+.||+.|...++|..||+ .|.           ++|+|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r-~H~-----------k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLR-KHN-----------TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHH-hcC-----------CcccCCcccceecccceeE
Confidence            4899999999999999999998 443           4899999999999877664

>PHA02768 hypothetical protein; Provisional

Probab=98.58  E-value=2.3e-08  Score=62.43  Aligned_cols=40  Identities=15%  Similarity=0.321  Sum_probs=33.7

Q ss_pred             CccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH
Q psy16775        144 PLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK  198 (306)
Q Consensus       144 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~  198 (306)
                      -|.|+.||+.|...+.|..|++             +|+  ++|+|..|++.|...
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r-------------~H~--k~~kc~~C~k~f~~~   44 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLR-------------KHN--TNLKLSNCKRISLRT   44 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHH-------------hcC--CcccCCcccceeccc
Confidence            4899999999999999999999             555  688888888887654

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.39  E-value=2.1e-07  Score=49.59  Aligned_cols=26  Identities=35%  Similarity=0.704  Sum_probs=23.3

Q ss_pred             HHHHHHHhhcCCCCCCCCcccccCcccccccC
Q psy16775         14 KLLNHVARDHNMSLKPAHLSYKCTVCTATFGM   45 (306)
Q Consensus        14 ~l~~H~~~~H~~~~~~~~~~y~C~~C~~~f~~   45 (306)
                      +|++|| +.|+++     +||.|+.|++.|.+
T Consensus         1 ~l~~H~-~~H~~~-----k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHM-RTHTGE-----KPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHH-HHHSSS-----SSEEESSSSEEESS
T ss_pred             CHHHHh-hhcCCC-----CCCCCCCCcCeeCc
Confidence            589999 789988     99999999999963

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.34  E-value=4.7e-07  Score=57.68  Aligned_cols=52  Identities=23%  Similarity=0.574  Sum_probs=43.0

Q ss_pred             CcCCCcchhhhHHH-HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcC
Q psy16775        185 GGRCPVCGRVYQWK-LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       185 ~~~C~~C~~~f~~~-l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~  242 (306)
                      .|.|++|++.|... |..|+...|...    .+.+.|++|...+.  .+|.+|+..+|+
T Consensus         2 ~f~CP~C~~~~~~~~L~~H~~~~H~~~----~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGKGFSESSLVEHCEDEHRSE----SKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCCccCHHHHHHHHHhHCcCC----CCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            48999999987777 999998888743    23699999998765  499999998774

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.31  E-value=4.1e-07  Score=48.43  Aligned_cols=24  Identities=38%  Similarity=0.840  Sum_probs=16.0

Q ss_pred             HHHHHHhhcCCCCCCCCcceecCccCcccC
Q psy16775        199 LLNHVARDHNMSLKPAHLSYKCTVCTATFG  228 (306)
Q Consensus       199 l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~  228 (306)
                      |.+|+ +.|+     |++||.|+.|++.|.
T Consensus         2 l~~H~-~~H~-----~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHM-RTHT-----GEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHH-HHHS-----SSSSEEESSSSEEES
T ss_pred             HHHHh-hhcC-----CCCCCCCCCCcCeeC
Confidence            56676 4566     666777777777765

...

>PHA00616 hypothetical protein

Probab=98.28  E-value=3.6e-07  Score=54.32  Aligned_cols=31  Identities=23%  Similarity=0.463  Sum_probs=28.1

Q ss_pred             ccccCcccccccCcHHHHHHHHhcCCCCCCC
Q psy16775         33 SYKCTVCTATFGMYRQFENHVYSAHSVAPRR   63 (306)
Q Consensus        33 ~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~   63 (306)
                      ||+|..||+.|..+++|..|++.||+++++.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~   31 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLT   31 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccc
Confidence            6999999999999999999999999975543

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.25  E-value=2e-06  Score=54.81  Aligned_cols=52  Identities=25%  Similarity=0.233  Sum_probs=42.6

Q ss_pred             CCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhcc
Q psy16775        106 SSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSH  168 (306)
Q Consensus       106 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  168 (306)
                      .|.|+.|++ ..+...|..|....|.        .+.+.+.|++|...+.  .+|..|+..+|
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~--------~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHR--------SESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCc--------CCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            488999999 5667899999988887        2456799999998765  49999998655

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.19  E-value=1.2e-06  Score=60.09  Aligned_cols=45  Identities=20%  Similarity=0.207  Sum_probs=38.7

Q ss_pred             CCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhh
Q psy16775        106 SSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLL  165 (306)
Q Consensus       106 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  165 (306)
                      +|.|+.|++.|.+...|..|++.+|.            ++.|+.|++.|.   .|..|++
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~------------~~~C~~CgKsF~---~l~~H~~   45 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT------------LTKCPVCNKSYR---RLNQHFY   45 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC------------CCccCCCCCEeC---Chhhhhc
Confidence            37899999999999999999974454            468999999998   5888887

>PHA00732 hypothetical protein

Probab=98.13  E-value=8e-07  Score=60.98  Aligned_cols=44  Identities=34%  Similarity=0.729  Sum_probs=36.7

Q ss_pred             CcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhh
Q psy16775        185 GGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYS  239 (306)
Q Consensus       185 ~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~  239 (306)
                      ||.|+.||+.|.+.  |+.|++..|.        ++.|+.||+.|.   .|..|+.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~--------~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT--------LTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC--------CCccCCCCCEeC---Chhhhhcc
Confidence            68999999999987  9999944565        368999999997   58888854

>PHA00616 hypothetical protein

Probab=98.11  E-value=1.3e-06  Score=51.87  Aligned_cols=34  Identities=18%  Similarity=0.253  Sum_probs=29.7

Q ss_pred             CccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        144 PLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       144 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      ||+|+.||+.|..++.|..|++             .|.+++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r-------------~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLL-------------SVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHH-------------HhcCCCccceeE
Confidence            6899999999999999999999             555678888764

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.96  E-value=5.2e-06  Score=42.80  Aligned_cols=23  Identities=26%  Similarity=0.723  Sum_probs=21.2

Q ss_pred             eecCccCcccCCHHHHHhhHhhh
Q psy16775        218 YKCTVCTATFGMYRQFENHVYSA  240 (306)
Q Consensus       218 ~~C~~C~~~f~~~~~L~~H~~~h  240 (306)
                      |.|+.|++.|.++..|.+|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999873

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.87  E-value=1.1e-05  Score=41.89  Aligned_cols=24  Identities=21%  Similarity=0.728  Sum_probs=20.4

Q ss_pred             eecCccCcccCCHHHHHhhHhhhc
Q psy16775        218 YKCTVCTATFGMYRQFENHVYSAH  241 (306)
Q Consensus       218 ~~C~~C~~~f~~~~~L~~H~~~hh  241 (306)
                      |.|++|++.|.+...|..|+.++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999999876

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.85  E-value=9.2e-06  Score=41.85  Aligned_cols=23  Identities=26%  Similarity=0.723  Sum_probs=21.5

Q ss_pred             cccCcccccccCcHHHHHHHHhc
Q psy16775         34 YKCTVCTATFGMYRQFENHVYSA   56 (306)
Q Consensus        34 y~C~~C~~~f~~~~~L~~H~~~h   56 (306)
                      |.|+.|++.|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999873

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.85  E-value=5e-06  Score=70.22  Aligned_cols=56  Identities=23%  Similarity=0.555  Sum_probs=45.2

Q ss_pred             CCCcCCCc--chhhhHHH--HHHHHHhhcCCC-------------CCCCCcceecCccCcccCCHHHHHhhHh
Q psy16775        183 KDGGRCPV--CGRVYQWK--LLNHVARDHNMS-------------LKPAHLSYKCTVCTATFGMYRQFENHVY  238 (306)
Q Consensus       183 ~~~~~C~~--C~~~f~~~--l~~H~~~~H~~~-------------~~~~~k~~~C~~C~~~f~~~~~L~~H~~  238 (306)
                      ++||+|++  |++.|.+.  |+.|+.--|...             .....|||.|.+|+++|+....|+.|..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            58999976  99999998  999995555221             1124589999999999999999999964

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=97.75  E-value=0.00042  Score=59.51  Aligned_cols=27  Identities=26%  Similarity=0.664  Sum_probs=22.1

Q ss_pred             ccccCc--ccccccCcHHHHHHHHhcCCC
Q psy16775         33 SYKCTV--CTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        33 ~y~C~~--C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      .|.|+.  |.........|..|.+..|+.
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~  179 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF  179 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc
Confidence            588875  788777789999999988864

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.73  E-value=2.3e-05  Score=40.61  Aligned_cols=24  Identities=21%  Similarity=0.728  Sum_probs=20.7

Q ss_pred             cccCcccccccCcHHHHHHHHhcC
Q psy16775         34 YKCTVCTATFGMYRQFENHVYSAH   57 (306)
Q Consensus        34 y~C~~C~~~f~~~~~L~~H~~~hh   57 (306)
                      |.|++|++.|.+...|..|++++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999999876

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.69  E-value=2.5e-05  Score=41.95  Aligned_cols=26  Identities=27%  Similarity=0.546  Sum_probs=23.6

Q ss_pred             ceecCccCcccCCHHHHHhhHhhhcC
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~hh~  242 (306)
                      +|.|..|++.|.+...|..|++.|+.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            58999999999999999999988764

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.65  E-value=2.5e-05  Score=41.95  Aligned_cols=26  Identities=27%  Similarity=0.546  Sum_probs=23.9

Q ss_pred             ccccCcccccccCcHHHHHHHHhcCC
Q psy16775         33 SYKCTVCTATFGMYRQFENHVYSAHS   58 (306)
Q Consensus        33 ~y~C~~C~~~f~~~~~L~~H~~~hh~   58 (306)
                      ||.|..|++.|.+...|..|++.|++
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            69999999999999999999988764

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.57  E-value=3.9e-05  Score=55.46  Aligned_cols=60  Identities=17%  Similarity=0.280  Sum_probs=21.6

Q ss_pred             cCCccCcCCCChHHHHHHHHHhccccccc--------cc--c---CCCCCccccccccccCChHHHHhHhhhc
Q psy16775        108 SNNNKVKITPDLEQLRNHMQWIHKVKIHP--------KM--I---YNRPPLNCQKCQFRFFTDQGLERHLLGS  167 (306)
Q Consensus       108 ~C~~C~~~f~~~~~l~~H~~~~H~~~~h~--------~~--~---~~~~~~~C~~C~~~f~~~~~l~~H~~~~  167 (306)
                      .|..|+..|.+...|..||...|++....        +.  .   .....+.|.+|++.|.+...|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            48899999999999999998888832210        00  0   1123599999999999999999999964

>KOG2231|consensus

Probab=97.51  E-value=0.00082  Score=63.64  Aligned_cols=94  Identities=23%  Similarity=0.382  Sum_probs=55.4

Q ss_pred             CcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcch
Q psy16775        113 VKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCG  192 (306)
Q Consensus       113 ~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~  192 (306)
                      ....-+...|.+|++ .-.-  -.+.+.|  --.|..|...|.....|.+|++.+|                 |.|..|.
T Consensus       156 e~k~Yt~~el~~h~~-~gd~--d~~s~rG--hp~C~~C~~~fld~~el~rH~~~~h-----------------~~chfC~  213 (669)
T KOG2231|consen  156 ERKLYTRAELNLHLM-FGDP--DDESCRG--HPLCKFCHERFLDDDELYRHLRFDH-----------------EFCHFCD  213 (669)
T ss_pred             eeehehHHHHHHHHh-cCCC--ccccccC--CccchhhhhhhccHHHHHHhhccce-----------------eheeecC
Confidence            334445677888875 2110  0011111  3578999999999999999999655                 7787774


Q ss_pred             -----hhhHH-H--HHHHHHhhcCCCCCCCCcceecC--ccCc-ccCCHHHHHhhHh
Q psy16775        193 -----RVYQW-K--LLNHVARDHNMSLKPAHLSYKCT--VCTA-TFGMYRQFENHVY  238 (306)
Q Consensus       193 -----~~f~~-~--l~~H~~~~H~~~~~~~~k~~~C~--~C~~-~f~~~~~L~~H~~  238 (306)
                           ..|.. .  |..|.+..|          |.|.  .|-- .|.....+..|++
T Consensus       214 ~~~~~neyy~~~~dLe~HfR~~H----------flCE~~~C~~~~f~~~~~~ei~lk  260 (669)
T KOG2231|consen  214 YKTGQNEYYNDYDDLEEHFRKGH----------FLCEEEFCRTKKFYVAFELEIELK  260 (669)
T ss_pred             cccccchhcccchHHHHHhhhcC----------ccccccccccceeeehhHHHHHHH
Confidence                 22222 2  999996666          7776  5533 3333334444443

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.51  E-value=7.4e-05  Score=53.97  Aligned_cols=73  Identities=25%  Similarity=0.431  Sum_probs=22.0

Q ss_pred             cccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH-HHHHHHhhcCCCCCCCCcceecCccC
Q psy16775        146 NCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK-LLNHVARDHNMSLKPAHLSYKCTVCT  224 (306)
Q Consensus       146 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~-l~~H~~~~H~~~~~~~~k~~~C~~C~  224 (306)
                      +|.+|+..|.+...|..|+...|++...                ......... +..++...-       ...+.|.+|+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~----------------~~~~l~~~~~~~~~~~~~~-------~~~~~C~~C~   57 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP----------------DQKYLVDPNRLLNYLRKKV-------KESFRCPYCN   57 (100)
T ss_dssp             -----------------------------------------------------------------------SSEEBSSSS
T ss_pred             Cccccccccccccccccccccccccccc----------------ccccccccccccccccccc-------CCCCCCCccC
Confidence            5999999999999999999976642211                000111111 333431111       1149999999


Q ss_pred             cccCCHHHHHhhHhhhc
Q psy16775        225 ATFGMYRQFENHVYSAH  241 (306)
Q Consensus       225 ~~f~~~~~L~~H~~~hh  241 (306)
                      +.|.+...|..||+.++
T Consensus        58 ~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen   58 KTFRSREALQEHMRSKH   74 (100)
T ss_dssp             -EESSHHHHHHHHHHTT
T ss_pred             CCCcCHHHHHHHHcCcc
Confidence            99999999999999753

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.33  E-value=8.8e-05  Score=62.88  Aligned_cols=23  Identities=26%  Similarity=0.650  Sum_probs=21.9

Q ss_pred             cccccCc--ccccccCcHHHHHHHH
Q psy16775         32 LSYKCTV--CTATFGMYRQFENHVY   54 (306)
Q Consensus        32 ~~y~C~~--C~~~f~~~~~L~~H~~   54 (306)
                      |||+|++  |.+.|++...|+-|+.
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~l  372 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHML  372 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhh
Confidence            8999987  9999999999999986

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.15  E-value=0.00033  Score=36.34  Aligned_cols=24  Identities=25%  Similarity=0.613  Sum_probs=19.5

Q ss_pred             eecCccCcccCCHHHHHhhHhhhcC
Q psy16775        218 YKCTVCTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       218 ~~C~~C~~~f~~~~~L~~H~~~hh~  242 (306)
                      |+|+.|++... ...|.+|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            78999999988 9999999998874

>KOG2231|consensus

Probab=97.07  E-value=0.00087  Score=63.47  Aligned_cols=105  Identities=25%  Similarity=0.442  Sum_probs=72.0

Q ss_pred             cCCccCcCCCChHHHHHHHHHhccccccccccCCCCCcccccc---------ccccCChHHHHhHhhhccCCcchhhHHh
Q psy16775        108 SNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKC---------QFRFFTDQGLERHLLGSHGLVTSSMQEA  178 (306)
Q Consensus       108 ~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C---------~~~f~~~~~l~~H~~~~h~~~~~~~~~~  178 (306)
                      .|..| ..|.....|+.|+...|.            .+.|.+|         .....++..|..|++.---      .+.
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H~------------~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~------d~~  177 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQHK------------LHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDP------DDE  177 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhhh------------hhccccccccceeeeeeeehehHHHHHHHHhcCCC------ccc
Confidence            34445 455588999999977777            4555554         3345678889999883110      001


Q ss_pred             hhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccC------cccCCHHHHHhhHhhhcCC
Q psy16775        179 ANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCT------ATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       179 ~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~------~~f~~~~~L~~H~~~hh~~  243 (306)
                      .+.|  --.|..|...|...  |.+|++..|          |.|.+|+      .-|.....|..|.+..|-.
T Consensus       178 s~rG--hp~C~~C~~~fld~~el~rH~~~~h----------~~chfC~~~~~~neyy~~~~dLe~HfR~~Hfl  238 (669)
T KOG2231|consen  178 SCRG--HPLCKFCHERFLDDDELYRHLRFDH----------EFCHFCDYKTGQNEYYNDYDDLEEHFRKGHFL  238 (669)
T ss_pred             cccC--CccchhhhhhhccHHHHHHhhccce----------eheeecCcccccchhcccchHHHHHhhhcCcc
Confidence            1122  24799999998877  999995555          7888884      4577889999999988853

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.03  E-value=0.00066  Score=41.35  Aligned_cols=32  Identities=22%  Similarity=0.442  Sum_probs=23.2

Q ss_pred             CCcceecCccCcccCCHHHHHhhHhhhcCCCC
Q psy16775        214 AHLSYKCTVCTATFGMYRQFENHVYSAHSVAP  245 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~~  245 (306)
                      .+.|-.|++|+..+.+..+|++|+...|+..+
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            55689999999999999999999998887653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG1146|consensus

Probab=96.89  E-value=0.0005  Score=68.83  Aligned_cols=116  Identities=15%  Similarity=0.231  Sum_probs=75.4

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCCCCC-CCCCCCCCcccccCCCCCccccCCccccCCCCCCCCCCCCCCCCCcCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSVAPR-RPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSSNN  110 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~-~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~C~  110 (306)
                      +.|+|+.|++.|.....|..|||+.|.+... .|..+..   -.....+..|.|                  ....|.|.
T Consensus       464 kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~---~~~~arg~~~~~------------------~~~p~~C~  522 (1406)
T KOG1146|consen  464 KTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQN---HPRLARGEVYRC------------------PGKPYPCR  522 (1406)
T ss_pred             ccccCCccchhhhhHHHhhhcccccccccchhHhHhccc---cccccccccccC------------------CCCcccce
Confidence            8999999999999999999999987654221 0000000   000111122222                  23469999


Q ss_pred             ccCcCCCChHHHHHHHHHh-cc---------cccccccc-----------------------CCCCCccccccccccCCh
Q psy16775        111 NKVKITPDLEQLRNHMQWI-HK---------VKIHPKMI-----------------------YNRPPLNCQKCQFRFFTD  157 (306)
Q Consensus       111 ~C~~~f~~~~~l~~H~~~~-H~---------~~~h~~~~-----------------------~~~~~~~C~~C~~~f~~~  157 (306)
                      .|...+....+|.+|++.- |.         ...+++.+                       ...-.+.|.+|++...-.
T Consensus       523 ~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetnia  602 (1406)
T KOG1146|consen  523 ACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIA  602 (1406)
T ss_pred             eeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhh
Confidence            9999999999999999622 21         01111111                       112348999999999999


Q ss_pred             HHHHhHhhhcc
Q psy16775        158 QGLERHLLGSH  168 (306)
Q Consensus       158 ~~l~~H~~~~h  168 (306)
                      .+|+.||...+
T Consensus       603 rnlrihmtss~  613 (1406)
T KOG1146|consen  603 RNLRIHMTASP  613 (1406)
T ss_pred             hccccccccCC
Confidence            99999988643

>smart00355 ZnF_C2H2 zinc finger

Probab=96.86  E-value=0.00077  Score=35.23  Aligned_cols=23  Identities=22%  Similarity=0.621  Sum_probs=20.7

Q ss_pred             eecCccCcccCCHHHHHhhHhhh
Q psy16775        218 YKCTVCTATFGMYRQFENHVYSA  240 (306)
Q Consensus       218 ~~C~~C~~~f~~~~~L~~H~~~h  240 (306)
                      |.|..|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            57999999999999999999854

>smart00355 ZnF_C2H2 zinc finger

Probab=96.85  E-value=0.00087  Score=35.03  Aligned_cols=23  Identities=22%  Similarity=0.621  Sum_probs=21.3

Q ss_pred             cccCcccccccCcHHHHHHHHhc
Q psy16775         34 YKCTVCTATFGMYRQFENHVYSA   56 (306)
Q Consensus        34 y~C~~C~~~f~~~~~L~~H~~~h   56 (306)
                      |.|..|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            68999999999999999999865

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.70  E-value=0.00098  Score=34.50  Aligned_cols=24  Identities=25%  Similarity=0.613  Sum_probs=19.8

Q ss_pred             cccCcccccccCcHHHHHHHHhcCC
Q psy16775         34 YKCTVCTATFGMYRQFENHVYSAHS   58 (306)
Q Consensus        34 y~C~~C~~~f~~~~~L~~H~~~hh~   58 (306)
                      |+|+.|+.... ...|..|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            78999999998 9999999998764

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.67  E-value=0.0013  Score=40.04  Aligned_cols=30  Identities=23%  Similarity=0.454  Sum_probs=22.6

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSVAP   61 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~   61 (306)
                      .|-.|++|+..+....+|.+|+...|+.+|
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            789999999999999999999999998644

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.55  E-value=0.0012  Score=34.46  Aligned_cols=23  Identities=22%  Similarity=0.658  Sum_probs=21.0

Q ss_pred             cccCcccccccCcHHHHHHHHhc
Q psy16775         34 YKCTVCTATFGMYRQFENHVYSA   56 (306)
Q Consensus        34 y~C~~C~~~f~~~~~L~~H~~~h   56 (306)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            78999999999999999999753

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.54  E-value=0.0017  Score=33.90  Aligned_cols=23  Identities=22%  Similarity=0.658  Sum_probs=20.7

Q ss_pred             eecCccCcccCCHHHHHhhHhhh
Q psy16775        218 YKCTVCTATFGMYRQFENHVYSA  240 (306)
Q Consensus       218 ~~C~~C~~~f~~~~~L~~H~~~h  240 (306)
                      |.|.+|+..|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999998753

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.11  E-value=0.0036  Score=33.40  Aligned_cols=22  Identities=27%  Similarity=0.632  Sum_probs=20.4

Q ss_pred             eecCccCcccCCHHHHHhhHhh
Q psy16775        218 YKCTVCTATFGMYRQFENHVYS  239 (306)
Q Consensus       218 ~~C~~C~~~f~~~~~L~~H~~~  239 (306)
                      |.|.+|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999865

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.74  E-value=0.0058  Score=32.56  Aligned_cols=22  Identities=23%  Similarity=0.634  Sum_probs=18.9

Q ss_pred             ccccccccccCChHHHHhHhhh
Q psy16775        145 LNCQKCQFRFFTDQGLERHLLG  166 (306)
Q Consensus       145 ~~C~~C~~~f~~~~~l~~H~~~  166 (306)
                      |.|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6789999999999999988873

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.69  E-value=0.0068  Score=52.34  Aligned_cols=26  Identities=19%  Similarity=0.164  Sum_probs=19.6

Q ss_pred             CCcCC--ccCcCCCChHHHHHHHHHhcc
Q psy16775        106 SSSNN--NKVKITPDLEQLRNHMQWIHK  131 (306)
Q Consensus       106 ~~~C~--~C~~~f~~~~~l~~H~~~~H~  131 (306)
                      .|.|+  .|.........|+.|.+..|.
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~  178 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHG  178 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcC
Confidence            36664  477777778899999987776

>KOG1146|consensus

Probab=95.59  E-value=0.0052  Score=61.90  Aligned_cols=82  Identities=20%  Similarity=0.255  Sum_probs=61.4

Q ss_pred             ccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCC------------
Q psy16775        147 CQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLK------------  212 (306)
Q Consensus       147 C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~------------  212 (306)
                      |..|+..+.++..+..|+..            .+.-.+.|.|+.|+-.|...  |..||+..|.....            
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~------------L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~  506 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVV------------LHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRL  506 (1406)
T ss_pred             ccchhhhhhhhcccccceee------------eecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccc
Confidence            44455566666666666653            45666899999999999998  99999775543211            


Q ss_pred             -------CCCcceecCccCcccCCHHHHHhhHhhh
Q psy16775        213 -------PAHLSYKCTVCTATFGMYRQFENHVYSA  240 (306)
Q Consensus       213 -------~~~k~~~C~~C~~~f~~~~~L~~H~~~h  240 (306)
                             -+.++|.|..|...|....+|.+|+..-
T Consensus       507 arg~~~~~~~~p~~C~~C~~stttng~LsihlqS~  541 (1406)
T KOG1146|consen  507 ARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQSD  541 (1406)
T ss_pred             cccccccCCCCcccceeeeeeeecchHHHHHHHHH
Confidence                   1456899999999999999999998763

>KOG4173|consensus

Probab=95.50  E-value=0.0083  Score=47.96  Aligned_cols=83  Identities=28%  Similarity=0.517  Sum_probs=53.7

Q ss_pred             CCccccc--cccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCC-----CCCC
Q psy16775        143 PPLNCQK--CQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNM-----SLKP  213 (306)
Q Consensus       143 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~-----~~~~  213 (306)
                      +.|.|++  |-..|.....+..|-.+-|                .-.|.+|.+.|.+.  |..|+...|..     .++ 
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h----------------~~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veR-  140 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLH----------------GNSCSFCKRAFPTGHLLDAHILEWHDSLFQALVER-  140 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcc----------------cchhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHc-
Confidence            4466766  6667777666666665433                24677777777776  67776555521     111 


Q ss_pred             CCcceecC--ccCcccCCHHHHHhhHhhhcC
Q psy16775        214 AHLSYKCT--VCTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       214 ~~k~~~C~--~C~~~f~~~~~L~~H~~~hh~  242 (306)
                      |.-.|+|-  -|+..|.+...-+.|+-..|.
T Consensus       141 G~dMy~ClvEgCt~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  141 GQDMYQCLVEGCTEKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             CccHHHHHHHhhhhhhhhhhhhhhHHHHhcc
Confidence            44578884  488889888888888766554

>KOG2482|consensus

Probab=95.28  E-value=0.021  Score=49.37  Aligned_cols=61  Identities=18%  Similarity=0.345  Sum_probs=45.7

Q ss_pred             CCcCCccCcCCCChHHHHHHHHHhcc-----------cccccccc------CCCCCccccccccccCChHHHHhHhhh
Q psy16775        106 SSSNNNKVKITPDLEQLRNHMQWIHK-----------VKIHPKMI------YNRPPLNCQKCQFRFFTDQGLERHLLG  166 (306)
Q Consensus       106 ~~~C~~C~~~f~~~~~l~~H~~~~H~-----------~~~h~~~~------~~~~~~~C~~C~~~f~~~~~l~~H~~~  166 (306)
                      ...|-.|.....+...|..||+.+|.           +..++++.      .....-.|-.|+-.|.....|..||-.
T Consensus       279 ~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e  356 (423)
T KOG2482|consen  279 SVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVE  356 (423)
T ss_pred             ceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhccc
Confidence            37899999999999999999999987           11111110      122345788899999999999999873

>PRK04860 hypothetical protein; Provisional

Probab=95.27  E-value=0.0071  Score=47.54  Aligned_cols=37  Identities=27%  Similarity=0.508  Sum_probs=23.5

Q ss_pred             CcCCCcchhhhHHHHHHHHHhhcCCCCCCCCcceecCccCcccCC
Q psy16775        185 GGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGM  229 (306)
Q Consensus       185 ~~~C~~C~~~f~~~l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~  229 (306)
                      +|.|. |+. ....+++|. ++|.     ++++|.|..|+..|..
T Consensus       119 ~Y~C~-C~~-~~~~~rrH~-ri~~-----g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE-HQLTVRRHN-RVVR-----GEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC-eeCHHHHHH-HHhc-----CCccEECCCCCceeEE
Confidence            57776 766 222366776 6666     6666777777776654

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.39  E-value=0.033  Score=29.02  Aligned_cols=21  Identities=24%  Similarity=0.515  Sum_probs=14.8

Q ss_pred             eecCccCcccCCHHHHHhhHhh
Q psy16775        218 YKCTVCTATFGMYRQFENHVYS  239 (306)
Q Consensus       218 ~~C~~C~~~f~~~~~L~~H~~~  239 (306)
                      ..|+.||+.| ....|.+|+..
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4677888887 56777777653

>KOG2482|consensus

Probab=94.17  E-value=0.1  Score=45.31  Aligned_cols=22  Identities=27%  Similarity=0.208  Sum_probs=19.3

Q ss_pred             CCcCCccCcCCCChHHHHHHHH
Q psy16775        106 SSSNNNKVKITPDLEQLRNHMQ  127 (306)
Q Consensus       106 ~~~C~~C~~~f~~~~~l~~H~~  127 (306)
                      ++.|-.|.+.|+.+..|+.||+
T Consensus       195 r~~CLyCekifrdkntLkeHMr  216 (423)
T KOG2482|consen  195 RLRCLYCEKIFRDKNTLKEHMR  216 (423)
T ss_pred             hheeeeeccccCCcHHHHHHHH
Confidence            5778899999999999999997

>PRK04860 hypothetical protein; Provisional

Probab=93.91  E-value=0.022  Score=44.76  Aligned_cols=38  Identities=11%  Similarity=0.249  Sum_probs=32.0

Q ss_pred             CCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCCh
Q psy16775        106 SSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTD  157 (306)
Q Consensus       106 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~  157 (306)
                      .|.|. |+.   ....+.+|.+ .|.         ++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~r-i~~---------g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNR-VVR---------GEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHH-Hhc---------CCccEECCCCCceeEEe
Confidence            59998 998   6678899997 776         88999999999998654

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.79  E-value=0.059  Score=28.07  Aligned_cols=22  Identities=23%  Similarity=0.460  Sum_probs=18.4

Q ss_pred             ccccCcccccccCcHHHHHHHHh
Q psy16775         33 SYKCTVCTATFGMYRQFENHVYS   55 (306)
Q Consensus        33 ~y~C~~C~~~f~~~~~L~~H~~~   55 (306)
                      ...|+.||+.| ....|..|+..
T Consensus         2 l~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    2 LVPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CCcCCCCCCEE-CHHHHHHHHHh
Confidence            36799999999 77899999864

>KOG2186|consensus

Probab=93.64  E-value=0.031  Score=46.36  Aligned_cols=47  Identities=21%  Similarity=0.410  Sum_probs=41.0

Q ss_pred             CchhHHHHHHH-HHHHHHHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHh
Q psy16775          1 MFGSAAIQDVY-QWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYS   55 (306)
Q Consensus         1 ~~~~~~~~~~~-~~~l~~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~   55 (306)
                      ||.|..||+.- +..|.+|+.++++       .-|.|..|+..|.. .++..|..-
T Consensus         3 ~FtCnvCgEsvKKp~vekH~srCrn-------~~fSCIDC~k~F~~-~sYknH~kC   50 (276)
T KOG2186|consen    3 FFTCNVCGESVKKPQVEKHMSRCRN-------AYFSCIDCGKTFER-VSYKNHTKC   50 (276)
T ss_pred             EEehhhhhhhccccchHHHHHhccC-------CeeEEeeccccccc-chhhhhhhh
Confidence            69999999988 5789999988888       36999999999998 888888753

>KOG2785|consensus

Probab=93.51  E-value=0.17  Score=44.72  Aligned_cols=134  Identities=16%  Similarity=0.291  Sum_probs=89.5

Q ss_pred             CCcCCccCcCCCChHHHHHHHHHh-cc--ccc------------------------cccccCCCCCccccccccccCChH
Q psy16775        106 SSSNNNKVKITPDLEQLRNHMQWI-HK--VKI------------------------HPKMIYNRPPLNCQKCQFRFFTDQ  158 (306)
Q Consensus       106 ~~~C~~C~~~f~~~~~l~~H~~~~-H~--~~~------------------------h~~~~~~~~~~~C~~C~~~f~~~~  158 (306)
                      .|.|.-|...|.+...-+.|+++- |.  |+.                        -+......-++.|.+|.+.|.+..
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s~~   82 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFASPK   82 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccChh
Confidence            588999999999999899998622 22  000                        000113456799999999999999


Q ss_pred             HHHhHhhhccCCcch---------------hh---------------H---------------------Hhh------hc
Q psy16775        159 GLERHLLGSHGLVTS---------------SM---------------Q---------------------EAA------NK  181 (306)
Q Consensus       159 ~l~~H~~~~h~~~~~---------------~~---------------~---------------------~~~------h~  181 (306)
                      ....|+..--.....               ++               .                     +.+      -.
T Consensus        83 a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~e~~~dd~~Edi~~d~~~e~  162 (390)
T KOG2785|consen   83 AHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSEEEEEDDEEEDIEEDGDDED  162 (390)
T ss_pred             hHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccchhhccCcchhhhhhccchhc
Confidence            999988753221100               00               0                     000      00


Q ss_pred             CCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCC--------------C---CcceecCccC---cccCCHHHHHhhHhh
Q psy16775        182 GKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKP--------------A---HLSYKCTVCT---ATFGMYRQFENHVYS  239 (306)
Q Consensus       182 ~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~--------------~---~k~~~C~~C~---~~f~~~~~L~~H~~~  239 (306)
                      ...|-.|-.|++.+.+.  -..||...|..-...              |   ..-|.|-.|+   +.|.+.-+.+.||..
T Consensus       163 e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  163 ELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             ccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            11246799999999887  888998888653321              1   1248899999   999999999999964

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.31  E-value=0.056  Score=30.54  Aligned_cols=24  Identities=25%  Similarity=0.480  Sum_probs=21.5

Q ss_pred             cccccCcccccccCcHHHHHHHHh
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYS   55 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~   55 (306)
                      .+|.|..|+..|.+...+..|++.
T Consensus         2 ~~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        2 GGFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             cCeEccccCCccCCHHHHHHHHCh
Confidence            369999999999999999999864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.18  E-value=0.072  Score=30.05  Aligned_cols=23  Identities=26%  Similarity=0.564  Sum_probs=20.6

Q ss_pred             ceecCccCcccCCHHHHHhhHhh
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYS  239 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~  239 (306)
                      +|.|++|+..|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            48899999999999999999864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=92.98  E-value=0.043  Score=34.06  Aligned_cols=29  Identities=24%  Similarity=0.495  Sum_probs=19.5

Q ss_pred             CCcceecCccCcccCCHHHHHhhHhhhcC
Q psy16775        214 AHLSYKCTVCTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~~~~~L~~H~~~hh~  242 (306)
                      ||-.+.|+.||..|....+..+|+...|+
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            55566777777777777777777666554

>KOG4173|consensus

Probab=92.74  E-value=0.06  Score=43.20  Aligned_cols=87  Identities=22%  Similarity=0.382  Sum_probs=67.8

Q ss_pred             CCcCC--ccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCC
Q psy16775        106 SSSNN--NKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGK  183 (306)
Q Consensus       106 ~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~  183 (306)
                      .|.|+  -|...|.+...+..|....|+             -.|..|.+.|.+..-|..|+...|...+   +..+-.|.
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~-------------~sCs~C~r~~Pt~hLLd~HI~E~HDs~F---qa~veRG~  142 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHG-------------NSCSFCKRAFPTGHLLDAHILEWHDSLF---QALVERGQ  142 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhccc-------------chhHHHHHhCCchhhhhHHHHHHHHHHH---HHHHHcCc
Confidence            47775  477899999988899876665             4899999999999999999987652221   22355567


Q ss_pred             CCcCC--CcchhhhHHH--HHHHHHhhcC
Q psy16775        184 DGGRC--PVCGRVYQWK--LLNHVARDHN  208 (306)
Q Consensus       184 ~~~~C--~~C~~~f~~~--l~~H~~~~H~  208 (306)
                      ..|+|  +.|+..|.+.  -++|+-..|.
T Consensus       143 dMy~ClvEgCt~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  143 DMYQCLVEGCTEKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             cHHHHHHHhhhhhhhhhhhhhhHHHHhcc
Confidence            78999  5699999987  8899877775

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=91.25  E-value=0.086  Score=32.77  Aligned_cols=30  Identities=27%  Similarity=0.516  Sum_probs=26.7

Q ss_pred             CCCCCccccccccccCChHHHHhHhhhccC
Q psy16775        140 YNRPPLNCQKCQFRFFTDQGLERHLLGSHG  169 (306)
Q Consensus       140 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  169 (306)
                      .++.-+.|+.|+..|.......+|+...||
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            478889999999999999999999997775

>KOG2186|consensus

Probab=89.39  E-value=0.18  Score=42.00  Aligned_cols=49  Identities=27%  Similarity=0.476  Sum_probs=39.2

Q ss_pred             CcCCCcchhhhHHH-HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhc
Q psy16775        185 GGRCPVCGRVYQWK-LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAH  241 (306)
Q Consensus       185 ~~~C~~C~~~f~~~-l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh  241 (306)
                      -|.|.+||.+..-. |-+|+.+-+.       .-|.|-.|+..|.+ .+.+.|..--.
T Consensus         3 ~FtCnvCgEsvKKp~vekH~srCrn-------~~fSCIDC~k~F~~-~sYknH~kCIT   52 (276)
T KOG2186|consen    3 FFTCNVCGESVKKPQVEKHMSRCRN-------AYFSCIDCGKTFER-VSYKNHTKCIT   52 (276)
T ss_pred             EEehhhhhhhccccchHHHHHhccC-------CeeEEeeccccccc-chhhhhhhhcc
Confidence            38999999998888 9999955443       24999999999987 77888876543

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=89.09  E-value=0.58  Score=34.27  Aligned_cols=94  Identities=19%  Similarity=0.260  Sum_probs=48.4

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCCCCCCCCCCCCCccccc--CCCCCccccCCccccCCCCCCCCCCCCCCCCCcC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQST--DPMLKPLKINDEITIIPQPPRPTASSSSSTSSSN  109 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~--~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~C  109 (306)
                      +...|..|+....- +++..|++..|.......   .+......  .....+..  ........+..+..-......|.|
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~---~~~i~~~~~~~~~l~~~~--~~~~~p~~~~~Pi~gLp~~~G~~C   83 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKRHHILKSQE---RQRIVEAIRQWPDLLPDP--DDLQIPPDPSPPIPGLPVYDGYRC   83 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHhcccccHHH---HHHHHHHHHhhhhcccCc--cccCCCCCCCCcCCCCCCCCCeee
Confidence            67889999998776 999999996553311000   00000000  00000000  000000111111111222346889


Q ss_pred             ----CccCcCCCChHHHHHHHHHhcc
Q psy16775        110 ----NNKVKITPDLEQLRNHMQWIHK  131 (306)
Q Consensus       110 ----~~C~~~f~~~~~l~~H~~~~H~  131 (306)
                          ..|+..+.+...+.+|++.+|+
T Consensus        84 ~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   84 QCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             ecCCCCCCcEeccHHHHHHHHHHhcC
Confidence                9999999999999999987764

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2785|consensus

Probab=88.59  E-value=1.1  Score=39.75  Aligned_cols=60  Identities=18%  Similarity=0.103  Sum_probs=46.4

Q ss_pred             CCcCCccCcCCCChHHHHHHHHHhcccccccccc-------------CCCCCccccccc---cccCChHHHHhHhh
Q psy16775        106 SSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMI-------------YNRPPLNCQKCQ---FRFFTDQGLERHLL  165 (306)
Q Consensus       106 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~-------------~~~~~~~C~~C~---~~f~~~~~l~~H~~  165 (306)
                      +-.|-.|++.+.+...-..||...|+.-.-.+.-             .-..-|.|-.|+   +.|.+....+.||.
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~  241 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMR  241 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHh
Confidence            4789999999999999999999888821110000             012348999999   99999999999998

>KOG2893|consensus

Probab=88.54  E-value=0.092  Score=43.17  Aligned_cols=46  Identities=24%  Similarity=0.527  Sum_probs=37.9

Q ss_pred             CCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcC
Q psy16775        187 RCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       187 ~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~  242 (306)
                      .|=+|++.|...  |..|++..|          |+|.+|-+...+--.|..|--..|.
T Consensus        12 wcwycnrefddekiliqhqkakh----------fkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAKH----------FKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             eeeecccccchhhhhhhhhhhcc----------ceeeeehhhhccCCCceeehhhhhh
Confidence            588999999987  999995555          9999999988888888888544454

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=88.35  E-value=0.3  Score=27.29  Aligned_cols=25  Identities=28%  Similarity=0.677  Sum_probs=18.4

Q ss_pred             ccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhh
Q psy16775        145 LNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRV  194 (306)
Q Consensus       145 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~  194 (306)
                      |+|.+||..+..                         .+.++.|++||..
T Consensus         2 ~~C~~CGy~y~~-------------------------~~~~~~CP~Cg~~   26 (33)
T cd00350           2 YVCPVCGYIYDG-------------------------EEAPWVCPVCGAP   26 (33)
T ss_pred             EECCCCCCEECC-------------------------CcCCCcCcCCCCc
Confidence            789999977642                         2357899999864

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2893|consensus

Probab=86.96  E-value=0.17  Score=41.67  Aligned_cols=49  Identities=22%  Similarity=0.348  Sum_probs=37.6

Q ss_pred             CCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhc
Q psy16775        141 NRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDH  207 (306)
Q Consensus       141 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H  207 (306)
                      ..+++ |=+|++.|....-|..|++.                 +-|+|.+|-+...+.  |..|-..+|
T Consensus         8 ~~kpw-cwycnrefddekiliqhqka-----------------khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen    8 VDKPW-CWYCNREFDDEKILIQHQKA-----------------KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             cCCce-eeecccccchhhhhhhhhhh-----------------ccceeeeehhhhccCCCceeehhhhh
Confidence            34555 88999999999999999983                 559999998775554  666654555

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=86.25  E-value=0.35  Score=35.32  Aligned_cols=30  Identities=27%  Similarity=0.559  Sum_probs=19.0

Q ss_pred             cCCCcchhhhHHHHHHHHHhhcCCCCCCCCcceecCccCcccCCH
Q psy16775        186 GRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMY  230 (306)
Q Consensus       186 ~~C~~C~~~f~~~l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~  230 (306)
                      ..|+.||+.|.. |              +..|-.|+.||..|.-.
T Consensus        10 R~Cp~CG~kFYD-L--------------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYD-L--------------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhcc-C--------------CCCCccCCCCCCccCcc
Confidence            567777777743 1              11257788888877644

The function of members of this family is unknown.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=84.10  E-value=0.8  Score=41.86  Aligned_cols=59  Identities=17%  Similarity=0.441  Sum_probs=50.3

Q ss_pred             CCcCCCcchhhhHHH--HHHHHHh-hcCCCCCCCC--cceecC--ccCcccCCHHHHHhhHhhhcCCCCCC
Q psy16775        184 DGGRCPVCGRVYQWK--LLNHVAR-DHNMSLKPAH--LSYKCT--VCTATFGMYRQFENHVYSAHSVAPRR  247 (306)
Q Consensus       184 ~~~~C~~C~~~f~~~--l~~H~~~-~H~~~~~~~~--k~~~C~--~C~~~f~~~~~L~~H~~~hh~~~~~~  247 (306)
                      .++.|..|...|...  |.+|.+. .|.     ++  +++.|+  .|++.|.+...|.+|...|.+.....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~-----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHS-----GESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAK  353 (467)
T ss_pred             cCCCCccccCCccccccccccccccccc-----cccCCceeeeccCCCccccccccccCCcccccCCCccc
Confidence            478999999999998  9999932 677     66  789999  89999999999999999987766543

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=82.37  E-value=1.2  Score=26.58  Aligned_cols=26  Identities=15%  Similarity=0.351  Sum_probs=15.6

Q ss_pred             CcceecCccCcccCCH----HHHHhhHhhh
Q psy16775        215 HLSYKCTVCTATFGMY----RQFENHVYSA  240 (306)
Q Consensus       215 ~k~~~C~~C~~~f~~~----~~L~~H~~~h  240 (306)
                      .....|..|++.+...    .+|.+|++..
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL~~~   43 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHLKKK   43 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHHHHT
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhhhhh
Confidence            3457788888887664    6888888543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=82.14  E-value=0.82  Score=25.73  Aligned_cols=12  Identities=17%  Similarity=0.393  Sum_probs=9.1

Q ss_pred             CccccccccccC
Q psy16775        144 PLNCQKCQFRFF  155 (306)
Q Consensus       144 ~~~C~~C~~~f~  155 (306)
                      .|+|.+||..+.
T Consensus         2 ~~~C~~CG~i~~   13 (34)
T cd00729           2 VWVCPVCGYIHE   13 (34)
T ss_pred             eEECCCCCCEeE
Confidence            478999997653

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=81.76  E-value=0.26  Score=40.97  Aligned_cols=24  Identities=17%  Similarity=0.308  Sum_probs=18.5

Q ss_pred             CCCccccccccccCChHHHHhHhh
Q psy16775        142 RPPLNCQKCQFRFFTDQGLERHLL  165 (306)
Q Consensus       142 ~~~~~C~~C~~~f~~~~~l~~H~~  165 (306)
                      ++.+.||+|+..|.++.-+....+
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r   26 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIR   26 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCce
Confidence            457899999999988766655554

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=81.04  E-value=0.76  Score=29.17  Aligned_cols=34  Identities=26%  Similarity=0.561  Sum_probs=21.7

Q ss_pred             CCcCCCcchhhhHHHHHHHHHhhcCCCCCCCCcceecCccCcc
Q psy16775        184 DGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYKCTVCTAT  226 (306)
Q Consensus       184 ~~~~C~~C~~~f~~~l~~H~~~~H~~~~~~~~k~~~C~~C~~~  226 (306)
                      ..|.|+.||..-...-.+=  +.+.       .+|.|+.||+.
T Consensus        26 v~F~CPnCGe~~I~Rc~~C--Rk~g-------~~Y~Cp~CGF~   59 (61)
T COG2888          26 VKFPCPNCGEVEIYRCAKC--RKLG-------NPYRCPKCGFE   59 (61)
T ss_pred             eEeeCCCCCceeeehhhhH--HHcC-------CceECCCcCcc
Confidence            3599999997766551111  2221       26999999963

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=80.79  E-value=0.91  Score=35.83  Aligned_cols=25  Identities=28%  Similarity=0.848  Sum_probs=20.7

Q ss_pred             CCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchh
Q psy16775        143 PPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGR  193 (306)
Q Consensus       143 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~  193 (306)
                      +.|.|++||+.+                          .++.|-.||+||.
T Consensus       133 ~~~vC~vCGy~~--------------------------~ge~P~~CPiCga  157 (166)
T COG1592         133 KVWVCPVCGYTH--------------------------EGEAPEVCPICGA  157 (166)
T ss_pred             CEEEcCCCCCcc--------------------------cCCCCCcCCCCCC
Confidence            379999998654                          5688999999984

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	306
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.93
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.91
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.88
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.87
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.87
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.87
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.87
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.86
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.85
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.84
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.79
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.77
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.77
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.75
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.75
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.75
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.75
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.74
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.74
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.72
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.72
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.7
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.7
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.69
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.67
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.67
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.66
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.65
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.64
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.63
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.59
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.59
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.59
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.57
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.56
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.56
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.54
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.53
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.51
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.48
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.48
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.48
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.48
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.46
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.46
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.44
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.44
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.44
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.44
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.43
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.43
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.42
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.41
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.4
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.4
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.4
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.39
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.38
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.38
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.35
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.35
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.35
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.34
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.34
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.33
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.33
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.32
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.31
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.29
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.28
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.25
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.22
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.21
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.21
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.21
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.2
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.2
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.2
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.19
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.19
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.18
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.17
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.17
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.14
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.09
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.03
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.03
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.01
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.01
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.0
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.0
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.0
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.0
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.99
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.99
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.97
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.97
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.96
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.96
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.94
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.93
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.93
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.88
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.88
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.85
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.84
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.84
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.83
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.82
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.82
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.82
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.82
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.82
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.82
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.81
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.81
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.81
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.8
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.79
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.79
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.79
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.79
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.78
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.78
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.78
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.77
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.77
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.77
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.77
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.76
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.76
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.75
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.74
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.72
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.72
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.72
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.72
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.68
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.68
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.68
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.67
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.67
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.66
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.64
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.63
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.62
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.62
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.61
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.59
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.59
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.59
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.56
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.55
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.54
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.51
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.5
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.49
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.46
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.44
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.44
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.44
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.42
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.42
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.32
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.32
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.3
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.29
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.29
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.28
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.26
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.21
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.21
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.21
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.21
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.21
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.2
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.2
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.19
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.19
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.19
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.18
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.18
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.18
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.17
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.16
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.16
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.16
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.13
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.13
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.13
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.12
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.12
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.1
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.1
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.37
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.09
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.36
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.08
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.08
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.08
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.08
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.35
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.32
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.03
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.28
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.27
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.96
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.95
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.95
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.92
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.87
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.8
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.37
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.15
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.37
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.24
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.98
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.9
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.88
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.44
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.77
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	91.99
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	91.16
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	88.01
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	86.72
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	86.35
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	85.13
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	84.08
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	83.45
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	83.36
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	83.07

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1e-33  Score=231.09  Aligned_cols=111  Identities=23%  Similarity=0.440  Sum_probs=98.1

Q ss_pred             CCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCC
Q psy16775        106 SSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDG  185 (306)
Q Consensus       106 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~  185 (306)
                      .|.|++|++.|.+...|..|++ .|.         ++++|.|++|++.|.+...|..|++             +|.++++
T Consensus        77 ~~~C~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~C~~~f~~~~~l~~H~~-------------~h~~~~~  133 (190)
T 2i13_A           77 PYKCPECGKSFSQRANLRAHQR-THT---------GEKPYACPECGKSFSQLAHLRAHQR-------------THTGEKP  133 (190)
T ss_dssp             CEECTTTCCEESCHHHHHHHHH-HHH---------TCCCEECTTTCCEESSHHHHHHHHH-------------HHHCCCC
T ss_pred             CccCcccCCccCCHHHHHHHHH-hcC---------CCCCCcCCCCCCccCCHHHHHHHHH-------------HhCCCCC
Confidence            4778899999999999999997 555         6889999999999999999999999             7788999


Q ss_pred             cCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcCCCC
Q psy16775        186 GRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAP  245 (306)
Q Consensus       186 ~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~~  245 (306)
                      |.|++|++.|.+.  |..|+ ..|.     ++++|.|++|++.|.+...|.+|+++|+++.+
T Consensus       134 ~~C~~C~~~f~~~~~L~~H~-~~H~-----~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~  189 (190)
T 2i13_A          134 YKCPECGKSFSREDNLHTHQ-RTHT-----GEKPYKCPECGKSFSRRDALNVHQRTHTGKKT  189 (190)
T ss_dssp             EECTTTCCEESCHHHHHHHH-HHHH-----CCCCEECTTTCCEESSHHHHHHHHTTC-----
T ss_pred             eECCCCCcccCCHHHHHHHH-HhcC-----CCCCeECCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            9999999999987  99999 6676     77899999999999999999999999887653

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.96  E-value=8.6e-31  Score=213.70  Aligned_cols=164  Identities=20%  Similarity=0.356  Sum_probs=122.4

Q ss_pred             HHHHHHHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCCccccCCccccC
Q psy16775         12 QWKLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITII   91 (306)
Q Consensus        12 ~~~l~~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~   91 (306)
                      .+.|..|+ ..|.++     ++|.|+.|++.|.+...|..|++.|+++                                
T Consensus         6 ~~~l~~h~-~~~~~~-----~~~~C~~C~~~f~~~~~l~~H~~~h~~~--------------------------------   47 (190)
T 2i13_A            6 SSSSVAQA-ALEPGE-----KPYACPECGKSFSRSDHLAEHQRTHTGE--------------------------------   47 (190)
T ss_dssp             -------------------------------CCSSHHHHHGGGCC-----------------------------------
T ss_pred             hccchhhh-hhcCCC-----CCCcCCCCccccCCHHHHHHHHHHcCCC--------------------------------
Confidence            45688898 777766     8999999999999999999999887654                                


Q ss_pred             CCCCCCCCCCCCCCCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCc
Q psy16775         92 PQPPRPTASSSSSTSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLV  171 (306)
Q Consensus        92 ~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  171 (306)
                                   ..|.|++|++.|.+...|..|++ .|.         ++++|.|++|++.|.+...|..|++      
T Consensus        48 -------------~~~~C~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~C~~~f~~~~~l~~H~~------   98 (190)
T 2i13_A           48 -------------KPYKCPECGKSFSDKKDLTRHQR-THT---------GEKPYKCPECGKSFSQRANLRAHQR------   98 (190)
T ss_dssp             -------------CCEECTTTCCEESSHHHHHHHHH-HHH---------CCCCEECTTTCCEESCHHHHHHHHH------
T ss_pred             -------------CCccCCCcCchhCCHHHHHHHHH-hcC---------CCCCccCcccCCccCCHHHHHHHHH------
Confidence                         13667799999999999999997 555         6889999999999999999999999      


Q ss_pred             chhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcCCCCCCCC
Q psy16775        172 TSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA  249 (306)
Q Consensus       172 ~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~  249 (306)
                             +|.++++|.|++|++.|.+.  |..|+ ..|.     ++++|.|++|++.|.+...|..|+++|+++.++.+.
T Consensus        99 -------~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~-----~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  165 (190)
T 2i13_A           99 -------THTGEKPYACPECGKSFSQLAHLRAHQ-RTHT-----GEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP  165 (190)
T ss_dssp             -------HHHTCCCEECTTTCCEESSHHHHHHHH-HHHH-----CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT
T ss_pred             -------hcCCCCCCcCCCCCCccCCHHHHHHHH-HHhC-----CCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECC
Confidence                   77889999999999999987  99999 6666     778999999999999999999999999998888777


Q ss_pred             CCCCCC
Q psy16775        250 TDKKPQ  255 (306)
Q Consensus       250 ~~~~~~  255 (306)
                      .+.+.+
T Consensus       166 ~C~~~f  171 (190)
T 2i13_A          166 ECGKSF  171 (190)
T ss_dssp             TTCCEE
T ss_pred             CCCCcc
Confidence            666544

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=1e-29  Score=207.36  Aligned_cols=158  Identities=19%  Similarity=0.380  Sum_probs=125.9

Q ss_pred             HHHHHHH--HHHHHHHHHhhcCCCCCCCCccccc--CcccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCC
Q psy16775          5 AAIQDVY--QWKLLNHVARDHNMSLKPAHLSYKC--TVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLK   80 (306)
Q Consensus         5 ~~~~~~~--~~~l~~H~~~~H~~~~~~~~~~y~C--~~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~   80 (306)
                      ..|++.|  ...|..|+ +.|.++     ++|.|  ..|++.|.+...|..|+++|+++                     
T Consensus        18 ~~C~~~f~~~~~L~~H~-~~h~~~-----~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~---------------------   70 (190)
T 1tf6_A           18 ADCGAAYNKNWKLQAHL-CKHTGE-----KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE---------------------   70 (190)
T ss_dssp             TTTCCBCSSHHHHHHHH-HHHHCC-----CSSCCSSTTCCCCCSSHHHHHHHHTTTTTC---------------------
T ss_pred             CCCcchhCCHHHHHHHH-HhcCCC-----CCccCCCCCCChhhCCHHHHHHHHHHccCC---------------------
Confidence            4566666  45667776 555554     66777  66777777777777777665543                     


Q ss_pred             ccccCCccccCCCCCCCCCCCCCCCCCcCC--ccCcCCCChHHHHHHHHHhccccccccccCCCCCccc--cccccccCC
Q psy16775         81 PLKINDEITIIPQPPRPTASSSSSTSSSNN--NKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNC--QKCQFRFFT  156 (306)
Q Consensus        81 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C--~~C~~~f~~  156 (306)
                                              .+|.|+  .|++.|.+...|..|++..|.        .++++|.|  ++|++.|.+
T Consensus        71 ------------------------~~~~C~~~~C~~~f~~~~~l~~H~~~~h~--------~~~~~~~C~~~~C~k~f~~  118 (190)
T 1tf6_A           71 ------------------------KNFTCDSDGCDLRFTTKANMKKHFNRFHN--------IKICVYVCHFENCGKAFKK  118 (190)
T ss_dssp             ------------------------CCEECCSSSCCCEESCHHHHHHHHHTTSS--------TTTSCCEECSSSSCEECSS
T ss_pred             ------------------------CceeCCCCCCCCccCCHHHHHHHHHHhcC--------CCcceeeCCCCCCccccCC
Confidence                                    236677  899999999999999965773        26789999  889999999


Q ss_pred             hHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc--chhhhHHH--HHHHHHhhcCCCCCCCCcceecCc---cCcccCC
Q psy16775        157 DQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV--CGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTV---CTATFGM  229 (306)
Q Consensus       157 ~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~--C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~---C~~~f~~  229 (306)
                      ...|..|++             +|.++++|.|++  |++.|.+.  |..|+ +.|.     |   |.|..   |++.|.+
T Consensus       119 ~~~L~~H~~-------------~H~~~~~~~C~~~~C~k~F~~~~~L~~H~-~~H~-----~---~~C~~~~~C~~~f~~  176 (190)
T 1tf6_A          119 HNQLKVHQF-------------SHTQQLPYECPHEGCDKRFSLPSRLKRHE-KVHA-----G---YPCKKDDSCSFVGKT  176 (190)
T ss_dssp             HHHHHHHHG-------------GGSSSCSSBCCSSSCCCBCSSHHHHHHHH-TSSC-----S---CCCCSTTTCCCCCSC
T ss_pred             HHHHHHHHH-------------HhCCCCCccCCCCCCCchhcCHHHHHHHH-HHhC-----C---CcCCCCCcCCCcccc
Confidence            999999999             778899999988  99999987  99999 7776     4   89999   9999999


Q ss_pred             HHHHHhhHhhhcCC
Q psy16775        230 YRQFENHVYSAHSV  243 (306)
Q Consensus       230 ~~~L~~H~~~hh~~  243 (306)
                      ...|.+|+++||++
T Consensus       177 ~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          177 WTLYLKHVAECHQD  190 (190)
T ss_dssp             HHHHHHHHTTCC--
T ss_pred             HHHHHHHHHhhcCC
Confidence            99999999998763

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=1.4e-27  Score=188.15  Aligned_cols=146  Identities=21%  Similarity=0.365  Sum_probs=125.3

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCCccccCCccccCCCCCCCCCCCCCCCCCcCCc
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSSNNN  111 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~C~~  111 (306)
                      .+|.|+.|++.|.+...|..|++.+|..                 ...++|.|..                    -.|..
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h-----------------~~~~~~~C~~--------------------c~C~~   44 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIH-----------------GERKEFVCHW--------------------GGCSR   44 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSS-----------------SCSSCCCCCB--------------------TTCTT
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccC-----------------CCCcceeCCC--------------------CCccc
Confidence            6899999999999999999999854321                 1123444431                    13668


Q ss_pred             cCcCCCChHHHHHHHHHhccccccccccCCCCCccccc--cccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC
Q psy16775        112 KVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQK--CQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP  189 (306)
Q Consensus       112 C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~  189 (306)
                      |++.|.+...|..|++ .|.         ++++|.|++  |++.|.+...|..|++             +|.++++|.|+
T Consensus        45 c~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~~~C~~~f~~~~~l~~H~~-------------~h~~~~~~~C~  101 (155)
T 2gli_A           45 ELRPFKAQYMLVVHMR-RHT---------GEKPHKCTFEGCRKSYSRLENLKTHLR-------------SHTGEKPYMCE  101 (155)
T ss_dssp             TTCCCSSHHHHHHHTH-HHH---------CCCCCCCCSTTCCCCCSSHHHHHHHHH-------------HTTTCCCEECC
T ss_pred             hhhhhhhHHHHHHHHH-hcC---------CCCCccCCCCCCCCcccCHHHHHHHHH-------------HcCCCCCeeCC
Confidence            8899999999999997 565         788999986  9999999999999999             77889999999


Q ss_pred             c--chhhhHHH--HHHHHHhhcCCCCCCCCcceecCc--cCcccCCHHHHHhhHhhhcC
Q psy16775        190 V--CGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTV--CTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       190 ~--C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~--C~~~f~~~~~L~~H~~~hh~  242 (306)
                      +  |++.|.+.  |..|+...|.     ++++|.|++  |++.|.+...|.+|+++||+
T Consensus       102 ~~~C~~~f~~~~~L~~H~~~~H~-----~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          102 HEGCSKAFSNASDRAKHQNRTHS-----NEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             STTCCCEESSSSTTHHHHHHTTC-----SCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCCCCCccCCHHHHHHHHHHhcC-----CCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            8  99999988  9999977887     788999998  99999999999999999885

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.93  E-value=4.4e-26  Score=185.72  Aligned_cols=139  Identities=21%  Similarity=0.399  Sum_probs=123.8

Q ss_pred             Cccccc--CcccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCCccccCCccccCCCCCCCCCCCCCCCCCc
Q psy16775         31 HLSYKC--TVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSS  108 (306)
Q Consensus        31 ~~~y~C--~~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~  108 (306)
                      .++|.|  ..|++.|.+...|..|+++|+++                    +                         +|.
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~--------------------~-------------------------~~~   44 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTGE--------------------K-------------------------PFP   44 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCC--------------------C-------------------------SSC
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCCC--------------------C-------------------------Ccc
Confidence            489999  68999999999999999998764                    2                         255


Q ss_pred             C--CccCcCCCChHHHHHHHHHhccccccccccCCCCCcccc--ccccccCChHHHHhHhhhccCCcchhhHHhhh-cCC
Q psy16775        109 N--NNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQ--KCQFRFFTDQGLERHLLGSHGLVTSSMQEAAN-KGK  183 (306)
Q Consensus       109 C--~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h-~~~  183 (306)
                      |  +.|++.|.+...|..|++ .|.         ++++|.|+  .|++.|.+...|..|++.            +| .++
T Consensus        45 C~~~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~~~C~~~f~~~~~l~~H~~~------------~h~~~~  102 (190)
T 1tf6_A           45 CKEEGCEKGFTSLHHLTRHSL-THT---------GEKNFTCDSDGCDLRFTTKANMKKHFNR------------FHNIKI  102 (190)
T ss_dssp             CSSTTCCCCCSSHHHHHHHHT-TTT---------TCCCEECCSSSCCCEESCHHHHHHHHHT------------TSSTTT
T ss_pred             CCCCCCChhhCCHHHHHHHHH-Hcc---------CCCceeCCCCCCCCccCCHHHHHHHHHH------------hcCCCc
Confidence            5  689999999999999997 665         78999999  899999999999999953            45 467


Q ss_pred             CCcCC--CcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCc--cCcccCCHHHHHhhHhhhcC
Q psy16775        184 DGGRC--PVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTV--CTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       184 ~~~~C--~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~--C~~~f~~~~~L~~H~~~hh~  242 (306)
                      ++|.|  +.|++.|.+.  |..|+ ..|.     ++++|.|++  |++.|.+...|.+|+++|++
T Consensus       103 ~~~~C~~~~C~k~f~~~~~L~~H~-~~H~-----~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          103 CVYVCHFENCGKAFKKHNQLKVHQ-FSHT-----QQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             SCCEECSSSSCEECSSHHHHHHHH-GGGS-----SSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             ceeeCCCCCCccccCCHHHHHHHH-HHhC-----CCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            89999  8999999987  99999 7787     788999988  99999999999999999877

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=1.9e-24  Score=163.42  Aligned_cols=114  Identities=24%  Similarity=0.445  Sum_probs=103.3

Q ss_pred             CCCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCC
Q psy16775        104 STSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGK  183 (306)
Q Consensus       104 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~  183 (306)
                      ...|.|++|++.|.+...|..|++ .|.         ++++|.|++|++.|.+...|..|+..++          .+.++
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~C~~~f~~~~~l~~H~~~~~----------~~~~~   64 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLKVHNR-KHT---------GEKPFECPKCGKCYFRKENLLEHEARNC----------MNRSE   64 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHHHHHH-HHS---------SCCSCBCTTTCCBCSSHHHHHHHHHHCC----------CCSCC
T ss_pred             CCCCCCCCCCCcCCCHHHHHHHHH-hCC---------CCCCeECCCCCchhcCHHHHHHHHhhhh----------cCCCC
Confidence            356899999999999999999997 565         7889999999999999999999999765          57889


Q ss_pred             CCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        184 DGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       184 ~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      ++|.|++|++.|.+.  |..|+ ..|.     ++++|.|++|++.|.+...|.+|++.+|.+
T Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~-~~h~-----~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           65 QVFTCSVCQETFRRRMELRLHM-VSHT-----GEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-HHHS-----SSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             CCeECCCCCCccCCHHHHHHHH-HHcC-----CCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence            999999999999988  99999 6676     788999999999999999999999877765

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=5.6e-23  Score=155.33  Aligned_cols=114  Identities=18%  Similarity=0.247  Sum_probs=100.9

Q ss_pred             CCcccccCcccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCCccccCCccccCCCCCCCCCCCCCCCCCcC
Q psy16775         30 AHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSSN  109 (306)
Q Consensus        30 ~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~C  109 (306)
                      ++++|.|.+|++.|.+...|..|+++|+++                                             .+|.|
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------------------------------~~~~C   38 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGE---------------------------------------------KPFEC   38 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSC---------------------------------------------CSCBC
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCC---------------------------------------------CCeEC
Confidence            458999999999999999999999998764                                             13667


Q ss_pred             CccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC
Q psy16775        110 NNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP  189 (306)
Q Consensus       110 ~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~  189 (306)
                      ++|++.|.+...|..|++.+|.       +.++++|.|++|++.|.+...|..|++             +|.++++|.|+
T Consensus        39 ~~C~~~f~~~~~l~~H~~~~~~-------~~~~~~~~C~~C~~~f~~~~~l~~H~~-------------~h~~~~~~~C~   98 (124)
T 2dlq_A           39 PKCGKCYFRKENLLEHEARNCM-------NRSEQVFTCSVCQETFRRRMELRLHMV-------------SHTGEMPYKCS   98 (124)
T ss_dssp             TTTCCBCSSHHHHHHHHHHCCC-------CSCCCCEECSSSCCEESSHHHHHHHHH-------------HHSSSCSEECS
T ss_pred             CCCCchhcCHHHHHHHHhhhhc-------CCCCCCeECCCCCCccCCHHHHHHHHH-------------HcCCCCCccCC
Confidence            7999999999999999975422       127889999999999999999999999             77889999999


Q ss_pred             cchhhhHHH--HHHHHHhhcC
Q psy16775        190 VCGRVYQWK--LLNHVARDHN  208 (306)
Q Consensus       190 ~C~~~f~~~--l~~H~~~~H~  208 (306)
                      +|++.|.+.  |..|++..|.
T Consensus        99 ~C~~~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A           99 SCSQQFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             SSCCEESSHHHHHHHHHHTSS
T ss_pred             CccchhCCHHHHHHHHHHHCC
Confidence            999999988  9999977886

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.87  E-value=1.2e-22  Score=159.81  Aligned_cols=117  Identities=21%  Similarity=0.380  Sum_probs=104.3

Q ss_pred             CCCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCC--------ccccccccccCChHHHHhHhhhccCCcchhh
Q psy16775        104 STSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPP--------LNCQKCQFRFFTDQGLERHLLGSHGLVTSSM  175 (306)
Q Consensus       104 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  175 (306)
                      ...|.|.+|++.|.+...|..|++.+|.         ++.+        |.|++|++.|.+...|..|++          
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~---------~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~----------   83 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHV---------GGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR----------   83 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTS---------CCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTH----------
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcC---------CCcccCCccccccCCCCcccccCCHHHHHHHHH----------
Confidence            3569999999999999999999986576         4333        899999999999999999999          


Q ss_pred             HHhhhcCCCCcCCCc--chhhhHHH--HHHHHHhhcCCCCCCCCcceecCc--cCcccCCHHHHHhhHhhhcCCCCCCC
Q psy16775        176 QEAANKGKDGGRCPV--CGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTV--CTATFGMYRQFENHVYSAHSVAPRRP  248 (306)
Q Consensus       176 ~~~~h~~~~~~~C~~--C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~--C~~~f~~~~~L~~H~~~hh~~~~~~~  248 (306)
                         +|.++++|.|++  |++.|.+.  |..|+ ..|.     ++++|.|.+  |++.|.+...|.+|+++|+++.++.+
T Consensus        84 ---~h~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~-----~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c  153 (155)
T 2rpc_A           84 ---VHTGEKPFPCPFPGCGKIFARSENLKIHK-RTHT-----GEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS  153 (155)
T ss_dssp             ---HHHCCCSEECSCTTTCCEESCHHHHHHHH-TTTC-----SSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCS
T ss_pred             ---hcCCCCcccCCcCCCCCccCCHHHHHHHH-HhhC-----CCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCC
Confidence               778899999998  99999987  99999 7777     788999997  99999999999999999988766543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.87  E-value=8.4e-23  Score=153.28  Aligned_cols=107  Identities=23%  Similarity=0.423  Sum_probs=97.7

Q ss_pred             CCCcCCc--cCcCCCChHHHHHHHHHhccccccccccCCCCCcccc--ccccccCChHHHHhHhhhccCCcchhhHHhhh
Q psy16775        105 TSSSNNN--KVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQ--KCQFRFFTDQGLERHLLGSHGLVTSSMQEAAN  180 (306)
Q Consensus       105 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h  180 (306)
                      ++|.|.+  |++.|.+...|..|++ .|.         ++++|.|+  .|++.|.+...|..|++             +|
T Consensus         5 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~~~C~~~f~~~~~l~~H~~-------------~h   61 (119)
T 2jp9_A            5 RPFMCAYPGCNKRYFKLSHLQMHSR-KHT---------GEKPYQCDFKDCERRFSRSDQLKRHQR-------------RH   61 (119)
T ss_dssp             CCBCCCSTTSCCCBSCHHHHHHHHH-HHH---------TTCCEECCSTTCCCEESSHHHHHHHHH-------------HH
T ss_pred             eeeeCCCCCCcchhCCHHHHHHHHH-hhC---------CCCCccCCCCCCcCccCCHHHHHHHHH-------------Hc
Confidence            4588887  9999999999999998 665         78899999  79999999999999999             77


Q ss_pred             cCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceec--CccCcccCCHHHHHhhHhhh
Q psy16775        181 KGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKC--TVCTATFGMYRQFENHVYSA  240 (306)
Q Consensus       181 ~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C--~~C~~~f~~~~~L~~H~~~h  240 (306)
                      .++++|.|++|++.|.+.  |..|+ ..|.     ++++|.|  +.|++.|.+...|.+|+++|
T Consensus        62 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~-----~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           62 TGVKPFQCKTCQRKFSRSDHLKTHT-RTHT-----GEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HCCCCEECTTTCCEESCHHHHHHHH-HHHH-----TCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCCCCccCCccCchhCCHHHHHHHH-HHhc-----CCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            889999999999999987  99999 6676     7789999  89999999999999999875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=2.4e-23  Score=163.76  Aligned_cols=133  Identities=20%  Similarity=0.296  Sum_probs=113.2

Q ss_pred             chhHHHHHHH--HHHHHHHHHh--hcCCCCCCCCcccccCcc-----cccccCcHHHHHHHHhcCCCCCCCCCCCCCCcc
Q psy16775          2 FGSAAIQDVY--QWKLLNHVAR--DHNMSLKPAHLSYKCTVC-----TATFGMYRQFENHVYSAHSVAPRRPATDKKPQG   72 (306)
Q Consensus         2 ~~~~~~~~~~--~~~l~~H~~~--~H~~~~~~~~~~y~C~~C-----~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~   72 (306)
                      |.|..|++.|  ...|..|++.  .|.++     ++|.|.+|     ++.|.+...|..|+++|+++             
T Consensus         4 ~~C~~C~~~f~~~~~L~~H~~~~h~h~~~-----~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~-------------   65 (155)
T 2gli_A            4 CRWDGCSQEFDSQEQLVHHINSEHIHGER-----KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE-------------   65 (155)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHHHTSSSCS-----SCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC-------------
T ss_pred             CCcCCCccccCCHHHHHHHHHhhccCCCC-----cceeCCCCCccchhhhhhhHHHHHHHHHhcCCC-------------
Confidence            5688888888  6789999943  46655     89998753     49999999999999998765             


Q ss_pred             cccCCCCCccccCCccccCCCCCCCCCCCCCCCCCcCCc--cCcCCCChHHHHHHHHHhccccccccccCCCCCccccc-
Q psy16775         73 QSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSSNNN--KVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQK-  149 (306)
Q Consensus        73 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~-  149 (306)
                             +                         +|.|++  |++.|.+...|..|++ .|.         ++++|.|++ 
T Consensus        66 -------~-------------------------~~~C~~~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~~  103 (155)
T 2gli_A           66 -------K-------------------------PHKCTFEGCRKSYSRLENLKTHLR-SHT---------GEKPYMCEHE  103 (155)
T ss_dssp             -------C-------------------------CCCCCSTTCCCCCSSHHHHHHHHH-HTT---------TCCCEECCST
T ss_pred             -------C-------------------------CccCCCCCCCCcccCHHHHHHHHH-HcC---------CCCCeeCCCC
Confidence                   1                         255654  9999999999999997 665         789999999 


Q ss_pred             -cccccCChHHHHhHh-hhccCCcchhhHHhhhcCCCCcCCCc--chhhhHHH--HHHHHHhhc
Q psy16775        150 -CQFRFFTDQGLERHL-LGSHGLVTSSMQEAANKGKDGGRCPV--CGRVYQWK--LLNHVARDH  207 (306)
Q Consensus       150 -C~~~f~~~~~l~~H~-~~~h~~~~~~~~~~~h~~~~~~~C~~--C~~~f~~~--l~~H~~~~H  207 (306)
                       |++.|.+...|..|+ +             +|.++++|.|++  |++.|.+.  |..|++.+|
T Consensus       104 ~C~~~f~~~~~L~~H~~~-------------~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          104 GCSKAFSNASDRAKHQNR-------------THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             TCCCEESSSSTTHHHHHH-------------TTCSCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCCCccCCHHHHHHHHHH-------------hcCCCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence             999999999999999 5             778999999998  99999988  999995544

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.87  E-value=2.1e-22  Score=158.42  Aligned_cols=127  Identities=23%  Similarity=0.328  Sum_probs=107.0

Q ss_pred             CCcccccCcccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCCccccCCccccCCCCCCCCCCCCCCCCCcC
Q psy16775         30 AHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSSN  109 (306)
Q Consensus        30 ~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~C  109 (306)
                      ++.+|.|..|++.|.+...|..|++.+|.....        .        ..+.|                    ..|.|
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~--------~--------~~~~~--------------------~~~~C   65 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPE--------Q--------NNHVC--------------------YWEEC   65 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTT--------C--------SSCCC--------------------CBTTC
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcc--------c--------CCccc--------------------cccCC
Confidence            347899999999999999999999986653110        0        01111                    23789


Q ss_pred             CccCcCCCChHHHHHHHHHhccccccccccCCCCCccccc--cccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcC
Q psy16775        110 NNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQK--CQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGR  187 (306)
Q Consensus       110 ~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~  187 (306)
                      .+|++.|.+...|..|++ .|.         ++++|.|++  |++.|.+...|..|++             +|.++++|.
T Consensus        66 ~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~~~C~~~f~~~~~L~~H~~-------------~h~~~~~~~  122 (155)
T 2rpc_A           66 PREGKSFKAKYKLVNHIR-VHT---------GEKPFPCPFPGCGKIFARSENLKIHKR-------------THTGEKPFK  122 (155)
T ss_dssp             TTSSCCCSSHHHHHHHTH-HHH---------CCCSEECSCTTTCCEESCHHHHHHHHT-------------TTCSSCSBC
T ss_pred             CCcccccCCHHHHHHHHH-hcC---------CCCcccCCcCCCCCccCCHHHHHHHHH-------------hhCCCCCcc
Confidence            999999999999999998 565         789999998  9999999999999999             778899999


Q ss_pred             CCc--chhhhHHH--HHHHHHhhcCCCCCCCCcceecC
Q psy16775        188 CPV--CGRVYQWK--LLNHVARDHNMSLKPAHLSYKCT  221 (306)
Q Consensus       188 C~~--C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~  221 (306)
                      |++  |++.|.+.  |..|+ +.|.     ++++|.|+
T Consensus       123 C~~~~C~k~f~~~~~L~~H~-~~H~-----~~k~~~c~  154 (155)
T 2rpc_A          123 CEFEGCDRRFANSSDRKKHM-HVHT-----SDKSGPSS  154 (155)
T ss_dssp             CSSTTCCCCBSSHHHHHHSS-TTTT-----SCCCSCSC
T ss_pred             CCCCCCCCccCCHHHHHHHH-HHhc-----CCCCCCCC
Confidence            997  99999987  99999 7787     88899986

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.86  E-value=8e-23  Score=156.29  Aligned_cols=105  Identities=17%  Similarity=0.229  Sum_probs=88.6

Q ss_pred             CCCCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcC
Q psy16775        103 SSTSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKG  182 (306)
Q Consensus       103 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~  182 (306)
                      +.++|.|++|++.|.....|..|++ .|.         ++++|.|++|++.|.+...|..|++             +|++
T Consensus        19 Gek~y~C~~C~k~F~~~~~L~~H~~-~H~---------~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~   75 (133)
T 2lt7_A           19 GRVYYICIVCKRSYVCLTSLRRHFN-IHS---------WEKKYPCRYCEKVFPLAEYRTKHEI-------------HHTG   75 (133)
T ss_dssp             TEEEEEETTTCCEESCHHHHHHHHH-HHH---------CCSCEECSSSSCEESSHHHHHHHHH-------------HHHT
T ss_pred             CCcCeECCCCCCCcCCHHHHHHHHH-HcC---------CCCCeeCCccCeecccccchhhhcc-------------ccCC
Confidence            4456888899999999999999997 676         8899999999999999999999998             7889


Q ss_pred             CCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCH
Q psy16775        183 KDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMY  230 (306)
Q Consensus       183 ~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~  230 (306)
                      +++|.|++||+.|.+.  |..|++.+|........++|+|.+|++.|...
T Consensus        76 ~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           76 ERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             CCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             CccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            9999999999999887  99999777653322245679999999988653

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=2.3e-22  Score=152.10  Aligned_cols=111  Identities=23%  Similarity=0.482  Sum_probs=96.6

Q ss_pred             CCCcCC--ccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcC
Q psy16775        105 TSSSNN--NKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKG  182 (306)
Q Consensus       105 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~  182 (306)
                      ..|.|+  .|++.|.+...|..|++ .|+          +++|.|++|++.|.+...|..|++             +|.+
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h~----------~~~~~C~~C~~~f~~~~~l~~H~~-------------~h~~   59 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLH-THG----------PRVHVCAECGKAFVESSKLKRHQL-------------VHTG   59 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHG-GGS----------CCCEECTTTCCEESSHHHHHHHGG-------------GTSC
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHH-HcC----------CCCeECCCCCchhCCHHHHHHHHH-------------HcCC
Confidence            458888  89999999999999997 553          679999999999999999999999             7788


Q ss_pred             CCCcCCCc--chhhhHHH--HHHHHHhhcCCCCCCCCcceecC--ccCcccCCHHHHHhhHhhhcCCCC
Q psy16775        183 KDGGRCPV--CGRVYQWK--LLNHVARDHNMSLKPAHLSYKCT--VCTATFGMYRQFENHVYSAHSVAP  245 (306)
Q Consensus       183 ~~~~~C~~--C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~--~C~~~f~~~~~L~~H~~~hh~~~~  245 (306)
                      +++|.|++  |++.|.+.  |..|+ ..|.     ++++|.|+  .|++.|.+...|.+|+++|+++.+
T Consensus        60 ~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~-----~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~  122 (124)
T 1ubd_C           60 EKPFQCTFEGCGKRFSLDFNLRTHV-RIHT-----GDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN  122 (124)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHH-HHHH-----CCCCCCCCSTTCCCCCSSTTTTHHHHHHHC----
T ss_pred             CCCeeCCCCCCcCccCCHHHHHHHH-HHhC-----CCCceECCCCCCCCccCCHHHHHHHHHHHccccc
Confidence            99999986  99999987  99999 6676     77889996  599999999999999999987643

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.85  E-value=1.6e-22  Score=154.56  Aligned_cols=93  Identities=23%  Similarity=0.426  Sum_probs=85.6

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCC
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLK  212 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~  212 (306)
                      |..+|.|+++|+|++|+++|.+...|..|++             +|+++++|.|++|++.|.+.  |..|+ ..|.    
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~----   74 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFN-------------IHSWEKKYPCRYCEKVFPLAEYRTKHE-IHHT----   74 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHH-------------HHHCCSCEECSSSSCEESSHHHHHHHH-HHHH----
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHH-------------HcCCCCCeeCCccCeecccccchhhhc-cccC----
Confidence            3456679999999999999999999999999             88999999999999999987  99999 7787    


Q ss_pred             CCCcceecCccCcccCCHHHHHhhHhhhcCCCCC
Q psy16775        213 PAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPR  246 (306)
Q Consensus       213 ~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~  246 (306)
                       |+++|.|++||+.|.+...|..|+++||++.+.
T Consensus        75 -~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~  107 (133)
T 2lt7_A           75 -GERRYQCLACGKSFINYQFMSSHIKSVHSQDPS  107 (133)
T ss_dssp             -TCCCEEESSSCCEESSHHHHHHHHHHHTCCCTT
T ss_pred             -CCccccCCCCCCCcCCHHHHHHHhHHhcCCCCC
Confidence             888999999999999999999999999987653

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.85  E-value=5.8e-22  Score=148.63  Aligned_cols=109  Identities=20%  Similarity=0.433  Sum_probs=96.9

Q ss_pred             CCcccccCc--ccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCCccccCCccccCCCCCCCCCCCCCCCCC
Q psy16775         30 AHLSYKCTV--CTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSS  107 (306)
Q Consensus        30 ~~~~y~C~~--C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~  107 (306)
                      ++++|.|.+  |++.|.+...|..|++.|+++                    +                         +|
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~--------------------~-------------------------~~   37 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGE--------------------K-------------------------PY   37 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTT--------------------C-------------------------CE
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCC--------------------C-------------------------Cc
Confidence            458999997  999999999999999998764                    1                         25


Q ss_pred             cCC--ccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCC
Q psy16775        108 SNN--NKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDG  185 (306)
Q Consensus       108 ~C~--~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~  185 (306)
                      .|+  .|++.|.+...|..|++ .|.         ++++|.|++|++.|.+...|..|++             +|.++++
T Consensus        38 ~C~~~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~C~~~f~~~~~l~~H~~-------------~h~~~~~   94 (119)
T 2jp9_A           38 QCDFKDCERRFSRSDQLKRHQR-RHT---------GVKPFQCKTCQRKFSRSDHLKTHTR-------------THTGEKP   94 (119)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHH-HHH---------CCCCEECTTTCCEESCHHHHHHHHH-------------HHHTCCC
T ss_pred             cCCCCCCcCccCCHHHHHHHHH-HcC---------CCCCccCCccCchhCCHHHHHHHHH-------------HhcCCCC
Confidence            565  79999999999999998 565         7889999999999999999999999             7788999


Q ss_pred             cCC--CcchhhhHHH--HHHHHHhhc
Q psy16775        186 GRC--PVCGRVYQWK--LLNHVARDH  207 (306)
Q Consensus       186 ~~C--~~C~~~f~~~--l~~H~~~~H  207 (306)
                      |.|  +.|++.|.+.  |..|+ +.|
T Consensus        95 ~~C~~~~C~~~f~~~~~L~~H~-~~H  119 (119)
T 2jp9_A           95 FSCRWPSCQKKFARSDELVRHH-NMH  119 (119)
T ss_dssp             EECCSTTCCCEESSHHHHHHHH-HTC
T ss_pred             eeCCCCCCccccCCHHHHHHHH-hcC
Confidence            999  8999999987  99999 544

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.84  E-value=1.2e-21  Score=148.04  Aligned_cols=113  Identities=21%  Similarity=0.381  Sum_probs=94.4

Q ss_pred             CcccccC--cccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCCccccCCccccCCCCCCCCCCCCCCCCCc
Q psy16775         31 HLSYKCT--VCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSS  108 (306)
Q Consensus        31 ~~~y~C~--~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~  108 (306)
                      .++|.|+  .|++.|.+...|..|+++| +.                    +                         .|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~--------------------~-------------------------~~~   36 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GP--------------------R-------------------------VHV   36 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SC--------------------C-------------------------CEE
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CC--------------------C-------------------------CeE
Confidence            3799999  8999999999999999887 32                    1                         266


Q ss_pred             CCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccc--cccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCc
Q psy16775        109 NNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQK--CQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGG  186 (306)
Q Consensus       109 C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~  186 (306)
                      |++|++.|.+...|..|++ .|.         ++++|.|++  |++.|.+...|..|++             +|.++++|
T Consensus        37 C~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~~~C~~~f~~~~~l~~H~~-------------~h~~~~~~   93 (124)
T 1ubd_C           37 CAECGKAFVESSKLKRHQL-VHT---------GEKPFQCTFEGCGKRFSLDFNLRTHVR-------------IHTGDRPY   93 (124)
T ss_dssp             CTTTCCEESSHHHHHHHGG-GTS---------CCCCEECCSTTCCCEESCHHHHHHHHH-------------HHHCCCCC
T ss_pred             CCCCCchhCCHHHHHHHHH-HcC---------CCCCeeCCCCCCcCccCCHHHHHHHHH-------------HhCCCCce
Confidence            7799999999999999997 665         789999986  9999999999999999             77889999


Q ss_pred             CCC--cchhhhHHH--HHHHHHhhcCCCCCCCCcce
Q psy16775        187 RCP--VCGRVYQWK--LLNHVARDHNMSLKPAHLSY  218 (306)
Q Consensus       187 ~C~--~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~  218 (306)
                      .|+  .|++.|.+.  |..|+ ..|.     +++++
T Consensus        94 ~C~~~~C~~~f~~~~~L~~H~-~~H~-----~~k~~  123 (124)
T 1ubd_C           94 VCPFDGCNKKFAQSTNLKSHI-LTHA-----KAKNN  123 (124)
T ss_dssp             CCCSTTCCCCCSSTTTTHHHH-HHHC----------
T ss_pred             ECCCCCCCCccCCHHHHHHHH-HHHc-----ccccC
Confidence            996  599999998  99999 6676     55554

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=1.9e-19  Score=129.65  Aligned_cols=87  Identities=22%  Similarity=0.378  Sum_probs=79.8

Q ss_pred             cCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCc
Q psy16775        139 IYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHL  216 (306)
Q Consensus       139 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k  216 (306)
                      ..++++|.|++|++.|.+...|..|++             +|.++++|.|++|++.|...  |..|+ ..|.     +++
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-------------~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~-----~~~   63 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMR-------------CHTGVKPYKCKTCDYAAADSSSLNKHL-RIHS-----DER   63 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGG-------------GCCCCCSEECSSSCCEESSHHHHHHHH-HHSC-----CCC
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHH-------------hcCCCCCEeCCCCCCccCCHHHHHHHH-HHhC-----CCC
Confidence            347899999999999999999999999             77789999999999999987  99999 6676     778


Q ss_pred             ceecCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      +|.|.+|++.|.+...|.+|+++|+++.
T Consensus        64 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~   91 (96)
T 2dmd_A           64 PFKCQICPYASRNSSQLTVHLRSHTGDS   91 (96)
T ss_dssp             CEECSSSSCEESSHHHHHHHHTTCCSCC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHhcCCC
Confidence            8999999999999999999999988764

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.77  E-value=9.3e-20  Score=135.85  Aligned_cols=97  Identities=16%  Similarity=0.252  Sum_probs=82.6

Q ss_pred             ccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCc-CCCcchhhh--HHH--HHHHHHhh
Q psy16775        132 VKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGG-RCPVCGRVY--QWK--LLNHVARD  206 (306)
Q Consensus       132 ~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~-~C~~C~~~f--~~~--l~~H~~~~  206 (306)
                      +..|+++|+++++|.|++|++.|.+...|..|++. +          .|.+++++ .|++|++.|  ...  |..|+ ..
T Consensus         7 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-~----------~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~-~~   74 (115)
T 2dmi_A            7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE-T----------GHYRDDNHETDNNNPKRWSKPRKRSLLEME-GK   74 (115)
T ss_dssp             CCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHH-T----------CCCBCSCCCCCCCCCSCCSSCCCCCCCCCC-CS
T ss_pred             hhhheeeeCCCCCEECCccCchhcCHHHHHHHHHH-h----------CccccCCCccCCCCCcccccccHHHHHHHh-hc
Confidence            45677777799999999999999999999999994 1          15566665 599999999  555  99998 77


Q ss_pred             cCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcCCCC
Q psy16775        207 HNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAP  245 (306)
Q Consensus       207 H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~~  245 (306)
                      |.     ++++|.|++|++.|.+...|.+|++.||....
T Consensus        75 H~-----~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           75 ED-----AQKVLKCMYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             CC-----CCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             cC-----CCcceECCCCCCccCCHHHHHHHHHHhCCccc
Confidence            87     78899999999999999999999999887643

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.77  E-value=6.3e-19  Score=129.27  Aligned_cols=88  Identities=18%  Similarity=0.346  Sum_probs=80.5

Q ss_pred             CCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcc
Q psy16775        140 YNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLS  217 (306)
Q Consensus       140 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~  217 (306)
                      ..+++|.|++|++.|.+...|..|++             +|.++++|.|++|++.|...  |..|+ ..|.     ++++
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~-------------~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~-----~~~~   73 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHER-------------THTDERPYTCDICHKAFRRQDHLRDHR-YIHS-----KEKP   73 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHH-------------HHCCSCCCBCSSSCCBCSCHHHHHHHG-GGSC-----CCCT
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHH-------------HcCCCCCcCCCCccchhCCHHHHHHHH-HHhC-----CCCC
Confidence            36789999999999999999999999             77889999999999999887  99999 7787     7789


Q ss_pred             eecCccCcccCCHHHHHhhHhhhcCCCCC
Q psy16775        218 YKCTVCTATFGMYRQFENHVYSAHSVAPR  246 (306)
Q Consensus       218 ~~C~~C~~~f~~~~~L~~H~~~hh~~~~~  246 (306)
                      |.|.+|++.|.+...|.+|+++|+++.++
T Consensus        74 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  102 (106)
T 2ee8_A           74 FKCQECGKGFCQSRTLAVHKTLHMQTSSP  102 (106)
T ss_dssp             TSCSSSCCCCSSHHHHHHHHHHTTSCCCC
T ss_pred             eECCCcCCcccCHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999876554

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.75  E-value=4.7e-19  Score=125.90  Aligned_cols=85  Identities=24%  Similarity=0.525  Sum_probs=75.4

Q ss_pred             CCCCcccc--ccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCc
Q psy16775        141 NRPPLNCQ--KCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHL  216 (306)
Q Consensus       141 ~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k  216 (306)
                      ++++|.|+  .|++.|.+...|..|++             +|.++++|.|++|++.|.+.  |..|+ ..|.     +++
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~-------------~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~-----~~~   61 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIR-------------IHTGQKPFQCRICMRNFSRSDHLTTHI-RTHT-----GEK   61 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHH-------------HHHCCCCEECTTTCCEESCHHHHHHHH-HHHH-----CCC
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHH-------------HhCCCCCccCCCCCcccCCHHHHHHHH-HHcC-----CCC
Confidence            36799998  59999999999999999             77889999999999999987  99999 5666     778


Q ss_pred             ceecCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      +|.|++|++.|.+...|.+|+++|+++.
T Consensus        62 ~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           62 PFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            8999999999999999999999988753

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.75  E-value=4.7e-19  Score=123.53  Aligned_cols=80  Identities=24%  Similarity=0.473  Sum_probs=73.6

Q ss_pred             CccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecC
Q psy16775        144 PLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCT  221 (306)
Q Consensus       144 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~  221 (306)
                      ||.|++|++.|.+...|..|++             +|.++++|.|+.|++.|.+.  |..|+ ..|.     ++++|.|+
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~-------------~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~-----~~~~~~C~   61 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLL-------------IHSDTRPYPCQYCGKRFHQKSDMKKHT-FIHT-----GEKPHKCQ   61 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH-------------HHHTCCCEECSSSCCEESSHHHHHHHH-HHHH-----TCCCEECT
T ss_pred             CccCCCCcccccCchhHHHHHH-------------HcCCCCCeeCCcCChhhCCHHHHHHHH-HHhc-----CCCCCcCC
Confidence            6899999999999999999999             77889999999999999887  99999 6666     77899999


Q ss_pred             ccCcccCCHHHHHhhHhhhcC
Q psy16775        222 VCTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       222 ~C~~~f~~~~~L~~H~~~hh~  242 (306)
                      +|++.|.+...|.+|+++|++
T Consensus        62 ~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           62 VCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             TTSCEESSHHHHHHHHHHHC-
T ss_pred             CcchhhCChHHHHHHHHhhCC
Confidence            999999999999999999864

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.75  E-value=5.9e-18  Score=124.06  Aligned_cols=91  Identities=19%  Similarity=0.301  Sum_probs=80.8

Q ss_pred             CCcccccCcccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCCccccCCccccCCCCCCCCCCCCCCCCCcC
Q psy16775         30 AHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSSN  109 (306)
Q Consensus        30 ~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~C  109 (306)
                      .+++|.|.+|++.|.....|..|+++|+++                                             ..|.|
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------------------------------~~~~C   48 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDE---------------------------------------------RPYTC   48 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCS---------------------------------------------CCCBC
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCC---------------------------------------------CCcCC
Confidence            348999999999999999999999998764                                             13667


Q ss_pred             CccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCC
Q psy16775        110 NNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRC  188 (306)
Q Consensus       110 ~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C  188 (306)
                      ++|++.|.....|..|++ .|.         ++++|.|++|++.|.+...|..|++             +|.++++|.+
T Consensus        49 ~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~C~~~f~~~~~L~~H~~-------------~H~~~~~~~~  104 (106)
T 2ee8_A           49 DICHKAFRRQDHLRDHRY-IHS---------KEKPFKCQECGKGFCQSRTLAVHKT-------------LHMQTSSPTA  104 (106)
T ss_dssp             SSSCCBCSCHHHHHHHGG-GSC---------CCCTTSCSSSCCCCSSHHHHHHHHH-------------HTTSCCCCCC
T ss_pred             CCccchhCCHHHHHHHHH-HhC---------CCCCeECCCcCCcccCHHHHHHHHH-------------HhCCCCCCcC
Confidence            799999999999999996 665         7899999999999999999999999             7778888865

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.2e-18  Score=128.13  Aligned_cols=89  Identities=15%  Similarity=0.207  Sum_probs=78.0

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCC
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLK  212 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~  212 (306)
                      ++++|+++++|.|++|++.|.+...|..|++             +|  +++|.|++|++.|...  |..|+ + |.    
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-------------~H--~~~~~C~~C~~~f~~~~~l~~H~-~-H~----   65 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHER-------------LC--RNAAVCPYCSLRFFSPELKQEHE-S-KC----   65 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHH-------------HH--HHSBCCTTTCCCBSSHHHHHHHH-H-HC----
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHH-------------HC--CCCccCCCCCCccCCHHHHHHHH-H-cC----
Confidence            4566779999999999999999999999999             55  3689999999999987  99999 6 76    


Q ss_pred             CCCcceecCccCcccCCHHHHHhhHh-hhcCCCC
Q psy16775        213 PAHLSYKCTVCTATFGMYRQFENHVY-SAHSVAP  245 (306)
Q Consensus       213 ~~~k~~~C~~C~~~f~~~~~L~~H~~-~hh~~~~  245 (306)
                       ++++|.|++|++.|.+...|.+|++ .|.++.+
T Consensus        66 -~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~   98 (107)
T 1wjp_A           66 -EYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNM   98 (107)
T ss_dssp             -STGGGEEGGGTEECSSHHHHHHHHHHTSCCCCC
T ss_pred             -CCCCccCccccchhCCHHHHHHHHHHHcCCCCC
Confidence             7889999999999999999999998 5444433

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.2e-18  Score=128.79  Aligned_cols=86  Identities=26%  Similarity=0.509  Sum_probs=79.1

Q ss_pred             ccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCC
Q psy16775        138 MIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAH  215 (306)
Q Consensus       138 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~  215 (306)
                      .|+++++|.| .|++.|.+...|..|++             +|.++++|.|++|++.|.+.  |..|+ ..|.     ++
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~-------------~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~-----~~   63 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMS-------------MHLGLRPYGCGVCGKKFKMKHHLVGHM-KIHT-----GI   63 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHH-------------HHSCCCSEECTTTSCEESSSHHHHHHH-TTTC-----CC
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHH-------------HcCCCcCccCCCCCcccCCHHHHHHHH-HHcC-----CC
Confidence            4569999999 99999999999999999             77889999999999999987  99999 7776     77


Q ss_pred             cceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      ++|.|.+|++.|.+...|.+|++.|+..
T Consensus        64 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           64 KPYECNICAKRFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred             CCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence            8899999999999999999999998764

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.8e-18  Score=124.17  Aligned_cols=87  Identities=30%  Similarity=0.542  Sum_probs=75.7

Q ss_pred             CCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcc
Q psy16775        140 YNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLS  217 (306)
Q Consensus       140 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~  217 (306)
                      .++++|.|++|++.|.+...|..|++             +|.++++|.|++|++.|.+.  |..|+ ..|...   .+++
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~-------------~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~---~~~~   65 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKL-------------SHSGEKPYSCPVCGLRFKRKDRMSYHV-RSHDGS---VGKP   65 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHH-------------HSCSSCSEECSSSCCEESCHHHHHHHH-HHHCCC---CCSS
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHH-------------hcCCCCCCcCCCCCCccCCHHHHHHHH-HHhcCC---CCCc
Confidence            37889999999999999999999999             77889999999999999987  99999 555411   1278


Q ss_pred             eecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        218 YKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       218 ~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      |.|.+|++.|.+...|..|++..|.+
T Consensus        66 ~~C~~C~~~f~~~~~L~~H~~~~H~~   91 (95)
T 2yt9_A           66 YICQSCGKGFSRPDHLNGHIKQVHSG   91 (95)
T ss_dssp             BCCSSSCCCBSSHHHHHHHHHHTSCC
T ss_pred             eECCCccchhCCHHHHHHHHHHhcCC
Confidence            99999999999999999999755544

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=5.6e-18  Score=124.50  Aligned_cols=89  Identities=15%  Similarity=0.197  Sum_probs=78.7

Q ss_pred             CcccccCcccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCCccccCCccccCCCCCCCCCCCCCCCCCcCC
Q psy16775         31 HLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSSNN  110 (306)
Q Consensus        31 ~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~C~  110 (306)
                      +++|.|.+|++.|.....|..|+++|..                                               .|.|.
T Consensus        14 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~-----------------------------------------------~~~C~   46 (107)
T 1wjp_A           14 KEVYQCRLCNAKLSSLLEQGSHERLCRN-----------------------------------------------AAVCP   46 (107)
T ss_dssp             CCCCBCTTTCCBCSSHHHHHHHHHHHHH-----------------------------------------------SBCCT
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHCCC-----------------------------------------------CccCC
Confidence            3899999999999999999999998731                                               26677


Q ss_pred             ccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC
Q psy16775        111 NKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP  189 (306)
Q Consensus       111 ~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~  189 (306)
                      +|++.|.....|..|+.  |.         ++++|.|++|++.|.+...|..|++.            +|.++++|.|.
T Consensus        47 ~C~~~f~~~~~l~~H~~--H~---------~~~~~~C~~C~~~f~~~~~L~~H~~~------------~H~~~~~~~~~  102 (107)
T 1wjp_A           47 YCSLRFFSPELKQEHES--KC---------EYKKLTCLECMRTFKSSFSIWRHQVE------------VHNQNNMAPTS  102 (107)
T ss_dssp             TTCCCBSSHHHHHHHHH--HC---------STGGGEEGGGTEECSSHHHHHHHHHH------------TSCCCCCCCCC
T ss_pred             CCCCccCCHHHHHHHHH--cC---------CCCCccCccccchhCCHHHHHHHHHH------------HcCCCCCCCCC
Confidence            99999999999999993  66         78999999999999999999999974            56788888874

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.6e-17  Score=119.40  Aligned_cols=84  Identities=24%  Similarity=0.419  Sum_probs=74.5

Q ss_pred             CCcccccCcccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCCccccCCccccCCCCCCCCCCCCCCCCCcC
Q psy16775         30 AHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSSN  109 (306)
Q Consensus        30 ~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~C  109 (306)
                      ++++|.|.+|++.|.+...|..|++.|+++                    +                         .|.|
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--------------------~-------------------------~~~C   39 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGV--------------------K-------------------------PYKC   39 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCC--------------------C-------------------------SEEC
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCC--------------------C-------------------------CEeC
Confidence            348999999999999999999999988654                    1                         3667


Q ss_pred             CccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhcc
Q psy16775        110 NNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSH  168 (306)
Q Consensus       110 ~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  168 (306)
                      ++|++.|.....|..|++ .|.         ++++|.|++|++.|.+...|..|++.|+
T Consensus        40 ~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~C~~~f~~~~~l~~H~~~h~   88 (96)
T 2dmd_A           40 KTCDYAAADSSSLNKHLR-IHS---------DERPFKCQICPYASRNSSQLTVHLRSHT   88 (96)
T ss_dssp             SSSCCEESSHHHHHHHHH-HSC---------CCCCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             CCCCCccCCHHHHHHHHH-HhC---------CCCCccCCCCCCccCCHHHHHHHHHHhc
Confidence            799999999999999997 665         7899999999999999999999999544

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.70  E-value=1.5e-17  Score=118.05  Aligned_cols=83  Identities=18%  Similarity=0.347  Sum_probs=72.8

Q ss_pred             CcccccC--cccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCCccccCCccccCCCCCCCCCCCCCCCCCc
Q psy16775         31 HLSYKCT--VCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSS  108 (306)
Q Consensus        31 ~~~y~C~--~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~  108 (306)
                      ++||.|.  .|++.|.....|..|+++|+++                    +                         .|.
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~--------------------~-------------------------~~~   36 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQ--------------------K-------------------------PFQ   36 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCC--------------------C-------------------------CEE
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCC--------------------C-------------------------Ccc
Confidence            4899998  5999999999999999998764                    1                         266


Q ss_pred             CCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhcc
Q psy16775        109 NNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSH  168 (306)
Q Consensus       109 C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  168 (306)
                      |..|++.|.+...|..|++ .|.         ++++|.|++|++.|.+...|..|+++|+
T Consensus        37 C~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~C~~~f~~~~~l~~H~~~H~   86 (90)
T 1a1h_A           37 CRICMRNFSRSDHLTTHIR-THT---------GEKPFACDICGRKFARSDERKRHTKIHL   86 (90)
T ss_dssp             CTTTCCEESCHHHHHHHHH-HHH---------CCCCEECTTTCCEESSHHHHHHHHGGGG
T ss_pred             CCCCCcccCCHHHHHHHHH-HcC---------CCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            7799999999999999997 665         7889999999999999999999999443

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.70  E-value=1.5e-17  Score=115.73  Aligned_cols=81  Identities=20%  Similarity=0.356  Sum_probs=72.1

Q ss_pred             ccccCcccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCCccccCCccccCCCCCCCCCCCCCCCCCcCCcc
Q psy16775         33 SYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSSNNNK  112 (306)
Q Consensus        33 ~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~C~~C  112 (306)
                      ||.|.+|++.|.....|..|+++|+++                    +                         +|.|+.|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~--------------------~-------------------------~~~C~~C   35 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDT--------------------R-------------------------PYPCQYC   35 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTC--------------------C-------------------------CEECSSS
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCC--------------------C-------------------------CeeCCcC
Confidence            699999999999999999999998764                    1                         2667799


Q ss_pred             CcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhcc
Q psy16775        113 VKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSH  168 (306)
Q Consensus       113 ~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  168 (306)
                      ++.|.....|..|++ .|.         ++++|.|++|++.|.+...|..|+++|+
T Consensus        36 ~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~C~~~f~~~~~l~~H~~~H~   81 (82)
T 2kmk_A           36 GKRFHQKSDMKKHTF-IHT---------GEKPHKCQVCGKAFSQSSNLITHSRKHT   81 (82)
T ss_dssp             CCEESSHHHHHHHHH-HHH---------TCCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred             ChhhCCHHHHHHHHH-Hhc---------CCCCCcCCCcchhhCChHHHHHHHHhhC
Confidence            999999999999997 565         7889999999999999999999999543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=2.1e-18  Score=128.46  Aligned_cols=95  Identities=17%  Similarity=0.233  Sum_probs=78.9

Q ss_pred             HHHHHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHh--cCCCCCCCCCCCCCCcccccCCCCCccccCCccccC
Q psy16775         14 KLLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYS--AHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITII   91 (306)
Q Consensus        14 ~l~~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~--hh~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~   91 (306)
                      .|..|+ +.|.++     ++|.|.+|++.|.....|..|++.  |.+.                    +           
T Consensus         6 ~l~~H~-~~H~~~-----~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~--------------------~-----------   48 (115)
T 2dmi_A            6 SGKLYG-SIFTGA-----SKFRCKDCSAAYDTLVELTVHMNETGHYRD--------------------D-----------   48 (115)
T ss_dssp             CCCCCC-CCCCCC-----CSEEBSSSSCEESSHHHHHHHHHHTCCCBC--------------------S-----------
T ss_pred             hhhhhe-eeeCCC-----CCEECCccCchhcCHHHHHHHHHHhCcccc--------------------C-----------
Confidence            467788 777766     999999999999999999999997  3221                    0           


Q ss_pred             CCCCCCCCCCCCCCCCcCCccCcCC--CChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhcc
Q psy16775         92 PQPPRPTASSSSSTSSSNNNKVKIT--PDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSH  168 (306)
Q Consensus        92 ~~~~~~~~~~~~~~~~~C~~C~~~f--~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  168 (306)
                                   ..+.|++|++.|  .....|..|++ .|.         ++++|.|++|++.|.+...|..|++.+|
T Consensus        49 -------------~~~~C~~C~~~f~f~~~~~l~~H~~-~H~---------~~~~~~C~~C~k~f~~~~~L~~H~~~hh  104 (115)
T 2dmi_A           49 -------------NHETDNNNPKRWSKPRKRSLLEMEG-KED---------AQKVLKCMYCGHSFESLQDLSVHMIKTK  104 (115)
T ss_dssp             -------------CCCCCCCCCSCCSSCCCCCCCCCCC-SCC---------CCSSCBCSSSCCBCSSHHHHHHHHHHTT
T ss_pred             -------------CCccCCCCCcccccccHHHHHHHhh-ccC---------CCcceECCCCCCccCCHHHHHHHHHHhC
Confidence                         124578999999  88888888875 555         8999999999999999999999999655

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=5.6e-17  Score=116.28  Aligned_cols=82  Identities=24%  Similarity=0.449  Sum_probs=73.8

Q ss_pred             CCCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCC
Q psy16775        104 STSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGK  183 (306)
Q Consensus       104 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~  183 (306)
                      ...|.|.+|++.|.+...|..|++ .|.         ++++|.|++|++.|.+...|..|++             +|.++
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~C~~~f~~~~~l~~H~~-------------~h~~~   61 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKL-SHS---------GEKPYSCPVCGLRFKRKDRMSYHVR-------------SHDGS   61 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHH-HSC---------SSCSEECSSSCCEESCHHHHHHHHH-------------HHCCC
T ss_pred             CCCeECCCCCCccCChHHHHHHHH-hcC---------CCCCCcCCCCCCccCCHHHHHHHHH-------------HhcCC
Confidence            356889999999999999999997 665         7889999999999999999999999             55665


Q ss_pred             --CCcCCCcchhhhHHH--HHHHHHhhcC
Q psy16775        184 --DGGRCPVCGRVYQWK--LLNHVARDHN  208 (306)
Q Consensus       184 --~~~~C~~C~~~f~~~--l~~H~~~~H~  208 (306)
                        ++|.|++|++.|.+.  |..|++..|.
T Consensus        62 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   90 (95)
T 2yt9_A           62 VGKPYICQSCGKGFSRPDHLNGHIKQVHS   90 (95)
T ss_dssp             CCSSBCCSSSCCCBSSHHHHHHHHHHTSC
T ss_pred             CCCceECCCccchhCCHHHHHHHHHHhcC
Confidence              899999999999988  9999966886

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.67  E-value=5.2e-17  Score=117.56  Aligned_cols=83  Identities=22%  Similarity=0.475  Sum_probs=75.8

Q ss_pred             CCCCccccc--cccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC--cchhhhHHH--HHHHHHhhcCCCCCCC
Q psy16775        141 NRPPLNCQK--CQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP--VCGRVYQWK--LLNHVARDHNMSLKPA  214 (306)
Q Consensus       141 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~--~C~~~f~~~--l~~H~~~~H~~~~~~~  214 (306)
                      ..++|.|++  |++.|.+...|..|++             +|.++++|.|+  .|++.|...  |..|+ ..|.     +
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~-------------~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~-----~   72 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLR-------------THTGEKPYKCTWEGCDWRFARSDELTRHY-RKHT-----G   72 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHH-------------HHSCCCCEECCSSSCCCEESSHHHHHHHH-HHHT-----S
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHH-------------HhCCCCCeeCCCCCCCCccCCHHHHHHHH-HHhC-----C
Confidence            567899997  9999999999999999             77889999996  699999887  99999 6676     7


Q ss_pred             CcceecCccCcccCCHHHHHhhHhhhcC
Q psy16775        215 HLSYKCTVCTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       215 ~k~~~C~~C~~~f~~~~~L~~H~~~hh~  242 (306)
                      +++|.|++|++.|.+...|.+|+++|++
T Consensus        73 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           73 AKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             CCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            7899999999999999999999999864

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=7.5e-17  Score=118.96  Aligned_cols=85  Identities=22%  Similarity=0.366  Sum_probs=74.9

Q ss_pred             CCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCCccccCCccccCCCCCCCCCCCCCCCCCc
Q psy16775         29 PAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSS  108 (306)
Q Consensus        29 ~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~  108 (306)
                      .++++|.| .|++.|.....|..|++.|+++                    +                         .|.
T Consensus         6 ~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~--------------------~-------------------------~~~   39 (110)
T 2csh_A            6 SGDKLYPC-QCGKSFTHKSQRDRHMSMHLGL--------------------R-------------------------PYG   39 (110)
T ss_dssp             CCCCCEEC-TTSCEESSHHHHHHHHHHHSCC--------------------C-------------------------SEE
T ss_pred             CCCCCEec-cCCCccCCHHHHHHHHHHcCCC--------------------c-------------------------Ccc
Confidence            34499999 9999999999999999998764                    2                         266


Q ss_pred             CCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccC
Q psy16775        109 NNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHG  169 (306)
Q Consensus       109 C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  169 (306)
                      |.+|++.|.....|..|++ .|.         ++++|.|++|++.|.+...|..|++.++.
T Consensus        40 C~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           40 CGVCGKKFKMKHHLVGHMK-IHT---------GIKPYECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             CTTTSCEESSSHHHHHHHT-TTC---------CCCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHH-HcC---------CCCCeeCCCCcchhcCHHHHHHHHHHccc
Confidence            7799999999999999997 665         78999999999999999999999997763

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.65  E-value=6.6e-17  Score=114.39  Aligned_cols=81  Identities=22%  Similarity=0.505  Sum_probs=73.7

Q ss_pred             CCCCccccc--cccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC--cchhhhHHH--HHHHHHhhcCCCCCCC
Q psy16775        141 NRPPLNCQK--CQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP--VCGRVYQWK--LLNHVARDHNMSLKPA  214 (306)
Q Consensus       141 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~--~C~~~f~~~--l~~H~~~~H~~~~~~~  214 (306)
                      ...+|.|++  |++.|.+...|..|++             +|.++++|.|+  .|++.|...  |..|+ ..|.     +
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~-------------~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~-----~   62 (89)
T 2wbs_A            2 RTATHTCDYAGCGKTYTKSSHLKAHLR-------------THTGEKPYHCDWDGCGWKFARSDELTRHY-RKHT-----G   62 (89)
T ss_dssp             -CCCEECCSTTTCCEESSHHHHHHHHT-------------TSCSSCCEECCSTTTCCEESSHHHHHHHH-HHHH-----C
T ss_pred             CCCCeeCCCCCCCCcCCCHHHHHHHHH-------------hcCCCCCcCCCCCCCCCccCCHHHHHHHH-HHcC-----C
Confidence            456899999  9999999999999999             77889999997  699999887  99999 6776     7


Q ss_pred             CcceecCccCcccCCHHHHHhhHhhh
Q psy16775        215 HLSYKCTVCTATFGMYRQFENHVYSA  240 (306)
Q Consensus       215 ~k~~~C~~C~~~f~~~~~L~~H~~~h  240 (306)
                      +++|.|++|++.|.+...|..|+++|
T Consensus        63 ~~~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           63 HRPFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHGGGG
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHhh
Confidence            78999999999999999999999886

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.64  E-value=5.3e-18  Score=120.05  Aligned_cols=83  Identities=20%  Similarity=0.363  Sum_probs=74.7

Q ss_pred             CCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCccee
Q psy16775        142 RPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYK  219 (306)
Q Consensus       142 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~  219 (306)
                      ++||.|++|++.|.+...|..|++             +|.++++|.|+.|++.|...  |..|++.+|.       .+|.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-------~~~~   60 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIR-------------THTGEKPFACDICGRKFARSDERKRHRDIQHI-------LPIL   60 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHH-------------HHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-------HHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHH-------------HcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-------Ccch
Confidence            468999999999999999999999             77889999999999999987  9999955542       4799


Q ss_pred             cCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        220 CTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       220 C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      |+.|++.|.+...|..|++.+|+..
T Consensus        61 c~~C~~~f~~~~~L~~H~~~~h~~~   85 (88)
T 1llm_C           61 EDKVEELLSKNYHLENEVARLKKLV   85 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHh
Confidence            9999999999999999999887643

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.63  E-value=7.7e-17  Score=104.79  Aligned_cols=55  Identities=22%  Similarity=0.378  Sum_probs=51.8

Q ss_pred             CCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        183 KDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       183 ~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      |+||.|++||+.|...  |..|+ +.|+     |++||.|++||+.|.+.++|.+|+++|.++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~-~~Ht-----~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHR-RAHL-----GYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHH-HHHH-----TCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHH-HHhC-----CCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            7899999999999987  99999 8898     899999999999999999999999998765

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.59  E-value=2.2e-15  Score=108.83  Aligned_cols=82  Identities=18%  Similarity=0.311  Sum_probs=72.1

Q ss_pred             CcccccCc--ccccccCcHHHHHHHHhcCCCCCCCCCCCCCCcccccCCCCCccccCCccccCCCCCCCCCCCCCCCCCc
Q psy16775         31 HLSYKCTV--CTATFGMYRQFENHVYSAHSVAPRRPATDKKPQGQSTDPMLKPLKINDEITIIPQPPRPTASSSSSTSSS  108 (306)
Q Consensus        31 ~~~y~C~~--C~~~f~~~~~L~~H~~~hh~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~  108 (306)
                      .++|.|..  |++.|.....|..|++.|+++                    ++                         |.
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~--------------------~~-------------------------~~   47 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGE--------------------KP-------------------------YK   47 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCC--------------------CC-------------------------EE
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCC--------------------CC-------------------------ee
Confidence            47999997  999999999999999998764                    22                         44


Q ss_pred             CC--ccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhc
Q psy16775        109 NN--NKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGS  167 (306)
Q Consensus       109 C~--~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  167 (306)
                      |.  .|++.|.....|..|++ .|.         ++++|.|++|++.|.+...|..|+++|
T Consensus        48 C~~~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~C~~~f~~~~~l~~H~~~H   98 (100)
T 2ebt_A           48 CTWEGCDWRFARSDELTRHYR-KHT---------GAKPFQCGVCNRSFSRSDHLALHMKRH   98 (100)
T ss_dssp             CCSSSCCCEESSHHHHHHHHH-HHT---------SCCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHH-HhC---------CCCCeECCCCcCccCCHHHHHHHHHHh
Confidence            53  69999999999999997 665         789999999999999999999999954

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.59  E-value=4.2e-16  Score=109.10  Aligned_cols=76  Identities=22%  Similarity=0.479  Sum_probs=70.2

Q ss_pred             Cccc--cccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc--chhhhHHH--HHHHHHhhcCCCCCCCCcc
Q psy16775        144 PLNC--QKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV--CGRVYQWK--LLNHVARDHNMSLKPAHLS  217 (306)
Q Consensus       144 ~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~--C~~~f~~~--l~~H~~~~H~~~~~~~~k~  217 (306)
                      ||.|  +.|++.|.+...|..|++             +|.++++|.|++  |++.|.+.  |..|+ +.|.     +   
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~-------------~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~-----~---   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQF-------------SHTQQLPYECPHEGCDKRFSLPSRLKRHE-KVHA-----G---   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH-------------HHHTTCCEECCSTTCCCEESSHHHHHHHH-HHHH-----S---
T ss_pred             CccCCCCCCCcccCCHHHHHHHHH-------------HhCCCCCeeCCCCCCcCccCCHHHHHHHH-HHhC-----C---
Confidence            6899  999999999999999999             778899999988  99999987  99999 6665     4   


Q ss_pred             eecCc---cCcccCCHHHHHhhHhhhc
Q psy16775        218 YKCTV---CTATFGMYRQFENHVYSAH  241 (306)
Q Consensus       218 ~~C~~---C~~~f~~~~~L~~H~~~hh  241 (306)
                      |.|..   |++.|.+...|.+|++.||
T Consensus        59 ~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           59 YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            99999   9999999999999999876

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.59  E-value=3.7e-16  Score=110.40  Aligned_cols=80  Identities=19%  Similarity=0.186  Sum_probs=71.8

Q ss_pred             CCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCC
Q psy16775        105 TSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKD  184 (306)
Q Consensus       105 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~  184 (306)
                      ++|.|++|++.|.....|..|++ .|.         ++++|.|++|++.|.+...|..|++.+|              ..
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~-~H~---------~~~~~~C~~C~k~f~~~~~L~~H~~~h~--------------~~   57 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIR-THT---------GEKPFACDICGRKFARSDERKRHRDIQH--------------IL   57 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHH-HHH---------CCCCEECTTTCCEESSHHHHHHHHHHHT--------------HH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHH-HcC---------CCCCccCCCCCCccCCHHHHHHHHHHhC--------------CC
Confidence            35888899999999999999997 566         7899999999999999999999999544              37


Q ss_pred             CcCCCcchhhhHHH--HHHHHHhhcC
Q psy16775        185 GGRCPVCGRVYQWK--LLNHVARDHN  208 (306)
Q Consensus       185 ~~~C~~C~~~f~~~--l~~H~~~~H~  208 (306)
                      +|.|+.|++.|...  |..|++..|.
T Consensus        58 ~~~c~~C~~~f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           58 PILEDKVEELLSKNYHLENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHhhhHHHHHHHHH
Confidence            89999999999998  9999988775

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.57  E-value=8.2e-16  Score=108.68  Aligned_cols=79  Identities=23%  Similarity=0.515  Sum_probs=72.0

Q ss_pred             CCCcCCc--cCcCCCChHHHHHHHHHhccccccccccCCCCCcccc--ccccccCChHHHHhHhhhccCCcchhhHHhhh
Q psy16775        105 TSSSNNN--KVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQ--KCQFRFFTDQGLERHLLGSHGLVTSSMQEAAN  180 (306)
Q Consensus       105 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h  180 (306)
                      ..|.|+.  |++.|.....|..|++ .|.         ++++|.|+  .|++.|.+...|..|++             +|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~~~C~~~f~~~~~l~~H~~-------------~h   60 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLR-THT---------GEKPYHCDWDGCGWKFARSDELTRHYR-------------KH   60 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHT-TSC---------SSCCEECCSTTTCCEESSHHHHHHHHH-------------HH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHH-hcC---------CCCCcCCCCCCCCCccCCHHHHHHHHH-------------Hc
Confidence            4688988  9999999999999997 666         78899997  59999999999999999             77


Q ss_pred             cCCCCcCCCcchhhhHHH--HHHHHHhhc
Q psy16775        181 KGKDGGRCPVCGRVYQWK--LLNHVARDH  207 (306)
Q Consensus       181 ~~~~~~~C~~C~~~f~~~--l~~H~~~~H  207 (306)
                      .++++|.|++|++.|...  |..|+ +.|
T Consensus        61 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~H   88 (89)
T 2wbs_A           61 TGHRPFQCQKCDRAFSRSDHLALHM-KRH   88 (89)
T ss_dssp             HCCCCEECSSSSCEESSHHHHHHHG-GGG
T ss_pred             CCCCCccCCCCCcccCCHHHHHHHH-Hhh
Confidence            899999999999999987  99999 655

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.56  E-value=2.3e-15  Score=97.74  Aligned_cols=51  Identities=25%  Similarity=0.288  Sum_probs=47.8

Q ss_pred             CCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhh
Q psy16775        105 TSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLL  165 (306)
Q Consensus       105 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  165 (306)
                      ++|.|++||+.|.....|..|++ .|.         +++||.|++|+++|...+.|..|++
T Consensus         3 Kpy~C~~C~k~F~~~~~L~~H~~-~Ht---------~ekp~~C~~C~k~F~~~~~L~~H~~   53 (60)
T 4gzn_C            3 RPFFCNFCGKTYRDASGLSRHRR-AHL---------GYRPRSCPECGKCFRDQSEVNRHLK   53 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHH-HHH---------TCCCEECTTTCCEESSHHHHHHHGG
T ss_pred             CCccCCCCCCEeCCHHHHHHHHH-HhC---------CCcCeECCCCCCCcCCHHHHHHHhC
Confidence            45778899999999999999997 787         8999999999999999999999999

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2.6e-15  Score=103.62  Aligned_cols=69  Identities=16%  Similarity=0.301  Sum_probs=61.2

Q ss_pred             CCCcCCc--cCcCCCChHHHHHHHHHhccccccccccCCCCCccccc--cccccCChHHHHhHhhhccCCcchhhHHhhh
Q psy16775        105 TSSSNNN--KVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQK--CQFRFFTDQGLERHLLGSHGLVTSSMQEAAN  180 (306)
Q Consensus       105 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h  180 (306)
                      ..|.|..  |++.|.+...|..|++..|.         ++++|.|++  |++.|.+...|..|++             +|
T Consensus         6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~---------~~~~~~C~~~~C~k~f~~~~~L~~H~~-------------~H   63 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHI---------HQKSFSCPEPACGKSFNFKKHLKEHMK-------------LH   63 (79)
T ss_dssp             SSEECSSTTTCCEESSHHHHHHHHHHGGG---------SCCCEECSCTTTCCEESSHHHHHHHHH-------------HH
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHHhC---------CCCCeECCCCCCcCccCCHHHHHHHHH-------------Hh
Confidence            3466665  99999999999999975676         889999999  9999999999999999             77


Q ss_pred             cCCCCcCCCcchhhh
Q psy16775        181 KGKDGGRCPVCGRVY  195 (306)
Q Consensus       181 ~~~~~~~C~~C~~~f  195 (306)
                      .++++|.|++|++.|
T Consensus        64 ~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A           64 SDTRDYICEFSGPSS   78 (79)
T ss_dssp             HTSCCCSCCSSSCCC
T ss_pred             CCCCCeeCCCCCCCC
Confidence            889999999999887

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=4e-15  Score=104.36  Aligned_cols=80  Identities=16%  Similarity=0.267  Sum_probs=52.3

Q ss_pred             cccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCC
Q psy16775        133 KIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMS  210 (306)
Q Consensus       133 ~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~  210 (306)
                      ..|+++|+++++|.|++|++.|.+...|..|++.+++         ....+++|.|++|++.|...  |..|+ ..|.  
T Consensus         4 ~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~---------~~~~~~~~~C~~C~~~f~~~~~L~~H~-~~h~--   71 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD---------PNFVPAAFVCSKCGKTFTRRNTMARHA-DNCA--   71 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC---------SSCCCCCEECSSSCCEESCHHHHHHHH-HHCC--
T ss_pred             ccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcC---------CcCCCcceECCCCCChhCCHHHHHHHH-HHcc--
Confidence            3456666688888888888888888888888774331         00012567777777777665  77777 4454  


Q ss_pred             CCCCCcceecCccCccc
Q psy16775        211 LKPAHLSYKCTVCTATF  227 (306)
Q Consensus       211 ~~~~~k~~~C~~C~~~f  227 (306)
                         +++++.|..|+..|
T Consensus        72 ---~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           72 ---GPDGVEGENSGPSS   85 (86)
T ss_dssp             ---CCCSCCCCCCCCCC
T ss_pred             ---CCCCcccCCCCCCC
Confidence               55567777776654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=2.9e-15  Score=103.37  Aligned_cols=71  Identities=24%  Similarity=0.466  Sum_probs=63.5

Q ss_pred             CCCCCccccc--cccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc--chhhhHHH--HHHHHHhhcCCCCCC
Q psy16775        140 YNRPPLNCQK--CQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV--CGRVYQWK--LLNHVARDHNMSLKP  213 (306)
Q Consensus       140 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~--C~~~f~~~--l~~H~~~~H~~~~~~  213 (306)
                      +++++|.|..  |++.|.+...|..|++.            +|.++++|.|++  |++.|.+.  |..|+ +.|.     
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~------------~H~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~-----   64 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKY------------QHIHQKSFSCPEPACGKSFNFKKHLKEHM-KLHS-----   64 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHH------------GGGSCCCEECSCTTTCCEESSHHHHHHHH-HHHH-----
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHH------------HhCCCCCeECCCCCCcCccCCHHHHHHHH-HHhC-----
Confidence            3788999997  99999999999999984            367899999999  99999987  99999 6676     


Q ss_pred             CCcceecCccCcccC
Q psy16775        214 AHLSYKCTVCTATFG  228 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~  228 (306)
                      ++++|.|++|++.|.
T Consensus        65 ~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           65 DTRDYICEFSGPSSG   79 (79)
T ss_dssp             TSCCCSCCSSSCCCC
T ss_pred             CCCCeeCCCCCCCCC
Confidence            788999999999984

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=3e-15  Score=108.00  Aligned_cols=75  Identities=21%  Similarity=0.298  Sum_probs=64.1

Q ss_pred             ccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhH-HH--HHHHHHhhcCCCCCCC-CcceecCccCcccC
Q psy16775        153 RFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQ-WK--LLNHVARDHNMSLKPA-HLSYKCTVCTATFG  228 (306)
Q Consensus       153 ~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~-~~--l~~H~~~~H~~~~~~~-~k~~~C~~C~~~f~  228 (306)
                      .+.....+..|++             +|.++++|.|++|++.|. ..  |..|+ +.|.     + +++|.|.+|++.|.
T Consensus         5 s~~~~~~~~~h~~-------------~h~~~~~~~C~~C~k~f~~~~~~L~~H~-~~h~-----~~~~~~~C~~C~k~F~   65 (98)
T 2gqj_A            5 SSGPGGPEEQWQR-------------AIHERGEAVCPTCNVVTRKTLVGLKKHM-EVCQ-----KLQDALKCQHCRKQFK   65 (98)
T ss_dssp             CCCCCCSCSHHHH-------------TTTTTSCCCCTTTCCCCSSCSHHHHHHH-HHHH-----HHHHHHSCSSSCCCCS
T ss_pred             CCCCCCcHHHHHH-------------HhccCCCcCCCCCCCChhhhHHHHHHHH-HHHc-----CCCCCEECCCCCCccC
Confidence            3455566777888             888999999999999998 76  99999 5565     5 78999999999999


Q ss_pred             CHHHHHhhHhhhcCCCCC
Q psy16775        229 MYRQFENHVYSAHSVAPR  246 (306)
Q Consensus       229 ~~~~L~~H~~~hh~~~~~  246 (306)
                      +...|.+|++.||++.+.
T Consensus        66 ~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A           66 SKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CHHHHHHHHHHHSCSCSS
T ss_pred             CHHHHHHHHHHHcCCCCC
Confidence            999999999999987653

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.4e-14  Score=99.54  Aligned_cols=61  Identities=23%  Similarity=0.496  Sum_probs=34.8

Q ss_pred             CCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcce
Q psy16775        141 NRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSY  218 (306)
Q Consensus       141 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~  218 (306)
                      ++++|.|++|++.|.+...|..|++             +|.++++|.|++|++.|...  |.+|+ +.|.     +++||
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~-------------~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~-----~~~p~   75 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRR-------------THTGEKPYKCDECGKAFIQRSHLIGHH-RVHT-----GSGPS   75 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHT-------------TTCCSCSEECSSSCCEESSHHHHHHHG-GGSC-----CCCCC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHH-------------HcCCCcCeeCCCCCCccCCHHHHHHHH-HHhC-----CCCCC
Confidence            5566666666666666666666665             44455555555555555554  55555 4444     44455


Q ss_pred             ec
Q psy16775        219 KC  220 (306)
Q Consensus       219 ~C  220 (306)
                      +|
T Consensus        76 ~C   77 (77)
T 2cot_A           76 SG   77 (77)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.48  E-value=1.1e-14  Score=101.85  Aligned_cols=75  Identities=29%  Similarity=0.358  Sum_probs=66.9

Q ss_pred             CCcC--CccCcCCCChHHHHHHHHHhccccccccccCCCCCccccc--cccccCChHHHHhHhhhccCCcchhhHHhhhc
Q psy16775        106 SSSN--NNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQK--CQFRFFTDQGLERHLLGSHGLVTSSMQEAANK  181 (306)
Q Consensus       106 ~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~  181 (306)
                      +|.|  +.|++.|.....|..|++ .|.         ++++|.|++  |++.|.+...|..|++             +|.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~~~C~~~f~~~~~l~~H~~-------------~h~   57 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQF-SHT---------QQLPYECPHEGCDKRFSLPSRLKRHEK-------------VHA   57 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH-HHH---------TTCCEECCSTTCCCEESSHHHHHHHHH-------------HHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHH-HhC---------CCCCeeCCCCCCcCccCCHHHHHHHHH-------------HhC
Confidence            3778  899999999999999997 666         789999998  9999999999999999             555


Q ss_pred             CCCCcCCCc---chhhhHHH--HHHHHHhh
Q psy16775        182 GKDGGRCPV---CGRVYQWK--LLNHVARD  206 (306)
Q Consensus       182 ~~~~~~C~~---C~~~f~~~--l~~H~~~~  206 (306)
                      +   |.|+.   |++.|.+.  |..|++.+
T Consensus        58 ~---~~C~~~~~C~~~f~~~~~l~~H~~~h   84 (85)
T 2j7j_A           58 G---YPCKKDDSCSFVGKTWTLYLKHVAEC   84 (85)
T ss_dssp             S---EECCSCSSCCCEESSHHHHHHHHHHC
T ss_pred             C---CCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            6   99999   99999887  99999444

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.9e-14  Score=103.96  Aligned_cols=71  Identities=18%  Similarity=0.199  Sum_probs=59.8

Q ss_pred             CCCCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhH-hhhccCCcchhhHHhhhc
Q psy16775        103 SSTSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERH-LLGSHGLVTSSMQEAANK  181 (306)
Q Consensus       103 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~~~~~~~~~~~h~  181 (306)
                      +.++|.|+.|++.|.....|..|++..|...      .++++|.|++|++.|.+...|..| ++             +|+
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~------~~ekpf~C~~Cgk~F~~~~~L~~H~~r-------------~Ht   75 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNV------VLNSSYVCVECNFLTKRYDALSEHNLK-------------YHP   75 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSC------CCSCCEEETTTTEEESSTHHHHTHHHH-------------TST
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCC------CCCCCcCCCCCCcccCCHHHHHHHHHH-------------hcC
Confidence            3356888899999999999999997567200      168899999999999999999999 77             788


Q ss_pred             CCCCcCCCcch
Q psy16775        182 GKDGGRCPVCG  192 (306)
Q Consensus       182 ~~~~~~C~~C~  192 (306)
                      +++||.|.++.
T Consensus        76 gekpy~C~~~~   86 (102)
T 2ghf_A           76 GEENFKLTMVK   86 (102)
T ss_dssp             TCCCEEEEECC
T ss_pred             CCCCeeCCccc
Confidence            99999998764

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=7.2e-15  Score=100.95  Aligned_cols=62  Identities=16%  Similarity=0.404  Sum_probs=54.9

Q ss_pred             hhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        179 ANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       179 ~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      +|+++++|.|++|++.|...  |..|++.+|..    ++++|.|++|++.|.+...|.+|++.+|+..
T Consensus         9 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~----~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            9 THSGEKPYECYICHARFTQSGTMKMHILQKHTE----NVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS----SCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             ccCCCCCeECCCcCchhCCHHHHHHHHHHhcCC----CCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            88999999999999999987  99999557862    1368999999999999999999999988764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=1.1e-14  Score=105.24  Aligned_cols=68  Identities=16%  Similarity=0.199  Sum_probs=54.6

Q ss_pred             CCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhh---cCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCC
Q psy16775        140 YNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAAN---KGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPA  214 (306)
Q Consensus       140 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h---~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~  214 (306)
                      ++++||.|++|++.|.+...|..|++.            +|   .++++|.|++||+.|...  |..|+.+.|.     |
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~------------~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Ht-----g   76 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDS------------EHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHP-----G   76 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHH------------HCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTST-----T
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHh------------hCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcC-----C
Confidence            478899999999999999999999873            35   457888888888888876  8888327787     7


Q ss_pred             CcceecCccC
Q psy16775        215 HLSYKCTVCT  224 (306)
Q Consensus       215 ~k~~~C~~C~  224 (306)
                      ++||.|.++.
T Consensus        77 ekpy~C~~~~   86 (102)
T 2ghf_A           77 EENFKLTMVK   86 (102)
T ss_dssp             CCCEEEEECC
T ss_pred             CCCeeCCccc
Confidence            7888888744

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=2.1e-13  Score=93.55  Aligned_cols=63  Identities=17%  Similarity=0.267  Sum_probs=57.6

Q ss_pred             CCCCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcC
Q psy16775        103 SSTSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKG  182 (306)
Q Consensus       103 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~  182 (306)
                      ...+|.|++|++.|.....|..|++ .|.         ++++|.|++|++.|.+...|..|++             +|.+
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~C~~~f~~~~~L~~H~~-------------~H~~   71 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRR-THT---------GEKPYKCDECGKAFIQRSHLIGHHR-------------VHTG   71 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHT-TTC---------CSCSEECSSSCCEESSHHHHHHHGG-------------GSCC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHH-HcC---------CCcCeeCCCCCCccCCHHHHHHHHH-------------HhCC
Confidence            3457999999999999999999997 666         7899999999999999999999999             7789


Q ss_pred             CCCcCC
Q psy16775        183 KDGGRC  188 (306)
Q Consensus       183 ~~~~~C  188 (306)
                      ++||.|
T Consensus        72 ~~p~~C   77 (77)
T 2cot_A           72 SGPSSG   77 (77)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            999998

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.44  E-value=5.5e-15  Score=112.12  Aligned_cols=82  Identities=22%  Similarity=0.292  Sum_probs=68.0

Q ss_pred             CCCCccccccccccC------ChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCC
Q psy16775        141 NRPPLNCQKCQFRFF------TDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLK  212 (306)
Q Consensus       141 ~~~~~~C~~C~~~f~------~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~  212 (306)
                      ..+.+.|++|.+.|.      ....|..|+.              |.++++|.|++||+.|...  |..|+ +.|   . 
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~--------------h~~~~~~~C~~C~k~f~~~~~l~~H~-~~H---~-   98 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLLA--------------SKAISQFVCPLCLMPFSSSVSLKQHI-RYT---E-   98 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHHH--------------HHHHCSEECTTTCCEESSHHHHHHHH-HHT---C-
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHHH--------------hCCCCCeECCCCCcccCCHhHHHHHH-HHC---C-
Confidence            345788999887766      5666777763              4678999999999999987  99999 666   2 


Q ss_pred             CCCcceecCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        213 PAHLSYKCTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       213 ~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                         ++|.|++|++.|.+...|.+|++.||+..
T Consensus        99 ---~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           99 ---HTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             ---CCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             ---CCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence               36999999999999999999999998763

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.5e-13  Score=96.21  Aligned_cols=76  Identities=18%  Similarity=0.243  Sum_probs=64.1

Q ss_pred             CCCCCCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhh
Q psy16775        101 SSSSTSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAAN  180 (306)
Q Consensus       101 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h  180 (306)
                      .....+|.|.+|++.|.....|..|++.+|...      ..+++|.|++|++.|.+...|..|++             +|
T Consensus        10 H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~------~~~~~~~C~~C~~~f~~~~~L~~H~~-------------~h   70 (86)
T 1x6h_A           10 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN------FVPAAFVCSKCGKTFTRRNTMARHAD-------------NC   70 (86)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS------CCCCCEECSSSCCEESCHHHHHHHHH-------------HC
T ss_pred             ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCc------CCCcceECCCCCChhCCHHHHHHHHH-------------Hc
Confidence            334567999999999999999999998666510      01379999999999999999999999             77


Q ss_pred             cCCCCcCCCcchhhh
Q psy16775        181 KGKDGGRCPVCGRVY  195 (306)
Q Consensus       181 ~~~~~~~C~~C~~~f  195 (306)
                      .+++++.|..|+..|
T Consensus        71 ~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           71 AGPDGVEGENSGPSS   85 (86)
T ss_dssp             CCCCSCCCCCCCCCC
T ss_pred             cCCCCcccCCCCCCC
Confidence            889999999998764

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=2.1e-14  Score=95.46  Aligned_cols=60  Identities=28%  Similarity=0.543  Sum_probs=53.8

Q ss_pred             hhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcC
Q psy16775        179 ANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       179 ~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~  242 (306)
                      +|+++++|.|+.|++.|.+.  |..|++.+|..    ++++|.|++|++.|.+...|.+|++.+|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~----~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKR----NVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSS----SCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCC----CCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            78899999999999999987  99999555722    66789999999999999999999999986

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=3.7e-14  Score=96.04  Aligned_cols=60  Identities=27%  Similarity=0.495  Sum_probs=55.2

Q ss_pred             hhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        179 ANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       179 ~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      +|.++++|.|++|++.|...  |..|+ +.|.     ++++|.|++|++.|.+...|.+|+++|+++.
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~-----~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQ-RVHT-----GEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHH-HGGG-----CSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHH-HhcC-----CCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            78999999999999999987  99999 6676     7789999999999999999999999988764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=5.9e-14  Score=94.45  Aligned_cols=61  Identities=20%  Similarity=0.330  Sum_probs=55.7

Q ss_pred             hhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcCCCC
Q psy16775        179 ANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAP  245 (306)
Q Consensus       179 ~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~~  245 (306)
                      .|.++++|.|++|++.|...  |..|+ ..|.     ++++|.|.+|++.|.+...|.+|++.|+++.+
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~-----~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHE-RIHC-----TDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHH-GGGC-----CSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHH-HHcC-----CCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            56889999999999999987  99999 7787     77899999999999999999999999998754

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=7.6e-14  Score=95.75  Aligned_cols=64  Identities=23%  Similarity=0.442  Sum_probs=55.8

Q ss_pred             cccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCC-CCcCCCcchhhhHHH--HHHHHHhhcC
Q psy16775        133 KIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGK-DGGRCPVCGRVYQWK--LLNHVARDHN  208 (306)
Q Consensus       133 ~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~-~~~~C~~C~~~f~~~--l~~H~~~~H~  208 (306)
                      ..|+++|+++++|.|++|++.|.+...|..|++.            .|.++ ++|.|++|++.|.+.  |..|++.+|.
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~------------~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQ------------KHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHH------------HSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHH------------hcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            4577888899999999999999999999999974            34554 899999999999987  9999977775

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.42  E-value=5e-14  Score=98.22  Aligned_cols=59  Identities=27%  Similarity=0.504  Sum_probs=52.9

Q ss_pred             hhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        179 ANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       179 ~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      ++...++|.|++||+.|.+.  |.+|+ +.|.     +++||.|++|++.|.++..|.+|++..|..
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~-~~H~-----~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHL-RLLH-----AAQVFPCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHH-HTTS-----CSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhh-hhcc-----CCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence            66778899999999999998  99999 7777     888999999999999999999998766654

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.41  E-value=8.6e-14  Score=97.04  Aligned_cols=57  Identities=21%  Similarity=0.283  Sum_probs=44.0

Q ss_pred             cCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcC
Q psy16775        139 IYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHN  208 (306)
Q Consensus       139 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~  208 (306)
                      +...++|.|++|++.|.++..|.+|++             +|.+++||.|++|++.|.+.  |.+|+++.|.
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~-------------~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLR-------------LLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHH-------------TTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhh-------------hccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            346677888888888888888888887             66777888888888888776  8888767776

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.40  E-value=4.5e-13  Score=91.09  Aligned_cols=61  Identities=18%  Similarity=0.261  Sum_probs=54.9

Q ss_pred             CCCCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcC
Q psy16775        103 SSTSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKG  182 (306)
Q Consensus       103 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~  182 (306)
                      ....|.|..|++.|.....|..|++ .|.         ++++|+|++|++.|.+...|..|++             +|++
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~-~H~---------~~~~~~C~~C~k~f~~~~~L~~H~~-------------~H~~   70 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKT-VHT---------GEKPYRCNICGAQFNRPANLKTHTR-------------IHSG   70 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHH-HHC---------CCCSEECTTTCCEESCHHHHHHHHH-------------HHCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHH-HcC---------CCCCEECCCCCchhCCHHHHHHHHH-------------hcCC
Confidence            3456999999999999999999997 666         7899999999999999999999999             7778


Q ss_pred             CCCc
Q psy16775        183 KDGG  186 (306)
Q Consensus       183 ~~~~  186 (306)
                      ++||
T Consensus        71 ~kp~   74 (74)
T 2lce_A           71 EKPY   74 (74)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            8876

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.40  E-value=1.1e-13  Score=94.21  Aligned_cols=60  Identities=20%  Similarity=0.475  Sum_probs=37.3

Q ss_pred             hhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        179 ANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       179 ~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      .+.++++|.|+.|++.|...  |..|+ +.|.     ++++|+|.+|++.|.+...|.+|+++|+++.
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~-----~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHK-TVHT-----GEKPYRCNICGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHH-HHHC-----CCCSEECTTTCCEESCHHHHHHHHHHHCCSC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHH-HHcC-----CCCCEECCCCCchhCCHHHHHHHHHhcCCCC
Confidence            34455556666666555554  56665 4454     5556777777777777777777777766554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=1.2e-13  Score=94.96  Aligned_cols=63  Identities=27%  Similarity=0.520  Sum_probs=52.7

Q ss_pred             hhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        179 ANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       179 ~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      +|+++++|.|++|++.|...  |..|+ +.|....  ++++|.|.+|++.|.+...|.+|++.+|...
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~--~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQ-RKHAETV--AALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHH-HHHHHHT--TTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHH-HHhhccC--CCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            36889999999999999987  99999 5565100  1678999999999999999999998777654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.39  E-value=8.2e-14  Score=89.63  Aligned_cols=55  Identities=25%  Similarity=0.593  Sum_probs=46.9

Q ss_pred             CCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcC
Q psy16775        182 GKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       182 ~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~  242 (306)
                      ++++|.|++|++.|.+.  |..|+ ..|.     ++++|.|++|++.|.+...|.+|++.||+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~-~~h~-----~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHL-RTHT-----GEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHH-HHHH-----CCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHH-HHcC-----CCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            46799999999999987  99999 6676     78899999999999999999999999874

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=1.8e-13  Score=98.11  Aligned_cols=71  Identities=20%  Similarity=0.280  Sum_probs=49.6

Q ss_pred             cCCCChHHHHHHHHHhccccccccccCCCCCcccccccccc-CChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcch
Q psy16775        114 KITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRF-FTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCG  192 (306)
Q Consensus       114 ~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f-~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~  192 (306)
                      ..|.....|..|++ .|.         ++++|.|++|++.| .+...|..|++             +| ++++|.|.+|+
T Consensus        14 ~~~~~~~~~~~~~~-~~~---------~~~~~~C~~C~k~F~~~~~~L~~H~~-------------~h-~~k~~~C~~Cg   69 (96)
T 2ctd_A           14 PVYAAGSLEEQWYL-EIV---------DKGSVSCPTCQAVGRKTIEGLKKHME-------------NC-KQEMFTCHHCG   69 (96)
T ss_dssp             CSSCTTCHHHHHHH-HHH---------HTSCEECTTTCSCEESSHHHHHHHHH-------------HH-CCCCCCCSSSC
T ss_pred             CCCCCchHHHHHHH-Hhc---------CCCCcCCCCCCCCcccCHHHHHHHHH-------------HH-CCCCeECCCCC
Confidence            35566677778876 444         57788888888888 78888888887             66 66777777776


Q ss_pred             hhhHHH--HHHHHHhhcC
Q psy16775        193 RVYQWK--LLNHVARDHN  208 (306)
Q Consensus       193 ~~f~~~--l~~H~~~~H~  208 (306)
                      +.|...  |..|+...|+
T Consensus        70 k~F~~~~~L~~H~~~~H~   87 (96)
T 2ctd_A           70 KQLRSLAGMKYHVMANHN   87 (96)
T ss_dssp             CCCSSHHHHHHHHHHHTC
T ss_pred             CeeCCHHHHHHHhHHhcC
Confidence            666655  6666225564

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=1.5e-13  Score=93.05  Aligned_cols=60  Identities=25%  Similarity=0.503  Sum_probs=53.3

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcC
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHN  208 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~  208 (306)
                      +.++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|++.|...  |.+|+ +.|.
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~   66 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQR-------------VHTGEKPYKCLECGKAFSQNSGLINHQ-RIHT   66 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHH-------------GGGCSCCEECSSSCCEESSHHHHHHHH-HHHH
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHH-------------hcCCCCCeECCCCCcccCCHHHHHHHH-HhcC
Confidence            3456779999999999999999999999999             77889999999999999987  99999 5564

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.35  E-value=3.3e-14  Score=107.76  Aligned_cols=69  Identities=22%  Similarity=0.475  Sum_probs=58.7

Q ss_pred             cCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchh
Q psy16775        114 KITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGR  193 (306)
Q Consensus       114 ~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~  193 (306)
                      ..|.....|..|++ ++          ++++|.|++|++.|.+...|..|++             +|  +++|.|++|++
T Consensus        55 ~~~~~~~~l~~h~~-h~----------~~~~~~C~~C~k~f~~~~~l~~H~~-------------~H--~~~~~C~~C~k  108 (129)
T 2wbt_A           55 QLLDESSYLYRLLA-SK----------AISQFVCPLCLMPFSSSVSLKQHIR-------------YT--EHTKVCPVCKK  108 (129)
T ss_dssp             GGTTTHHHHHHHHH-HH----------HHCSEECTTTCCEESSHHHHHHHHH-------------HT--CCCCBCTTTCC
T ss_pred             cccCCHHHHHHHHH-hC----------CCCCeECCCCCcccCCHhHHHHHHH-------------HC--CCCCCCCCCCc
Confidence            34557788888884 44          6789999999999999999999999             77  78999999999


Q ss_pred             hhHHH--HHHHHHhhcC
Q psy16775        194 VYQWK--LLNHVARDHN  208 (306)
Q Consensus       194 ~f~~~--l~~H~~~~H~  208 (306)
                      .|.+.  |.+|++.+|.
T Consensus       109 ~f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A          109 EFTSTDSALDHVCKKHN  125 (129)
T ss_dssp             BCSSHHHHHHHHHHTTC
T ss_pred             ccCCHHHHHHHHHHHCC
Confidence            99988  9999955553

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=3.6e-13  Score=96.53  Aligned_cols=71  Identities=18%  Similarity=0.286  Sum_probs=60.7

Q ss_pred             cccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhh-HHH--HHHHHHhhcCCCCCCCCcceecCccCcccC
Q psy16775        152 FRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVY-QWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFG  228 (306)
Q Consensus       152 ~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f-~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~  228 (306)
                      ..|.....|..|++             .+.++++|.|++|++.| ...  |..|+ +.|  +    +++|.|.+|++.|.
T Consensus        14 ~~~~~~~~~~~~~~-------------~~~~~~~~~C~~C~k~F~~~~~~L~~H~-~~h--~----~k~~~C~~Cgk~F~   73 (96)
T 2ctd_A           14 PVYAAGSLEEQWYL-------------EIVDKGSVSCPTCQAVGRKTIEGLKKHM-ENC--K----QEMFTCHHCGKQLR   73 (96)
T ss_dssp             CSSCTTCHHHHHHH-------------HHHHTSCEECTTTCSCEESSHHHHHHHH-HHH--C----CCCCCCSSSCCCCS
T ss_pred             CCCCCchHHHHHHH-------------HhcCCCCcCCCCCCCCcccCHHHHHHHH-HHH--C----CCCeECCCCCCeeC
Confidence            46778888999998             67789999999999999 666  99999 666  2    35799999999999


Q ss_pred             CHHHHHhh-HhhhcC
Q psy16775        229 MYRQFENH-VYSAHS  242 (306)
Q Consensus       229 ~~~~L~~H-~~~hh~  242 (306)
                      ++..|.+| +++|.+
T Consensus        74 ~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           74 SLAGMKYHVMANHNS   88 (96)
T ss_dssp             SHHHHHHHHHHHTCC
T ss_pred             CHHHHHHHhHHhcCC
Confidence            99999999 777643

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=5.2e-14  Score=101.41  Aligned_cols=69  Identities=20%  Similarity=0.328  Sum_probs=53.4

Q ss_pred             CCChHHHHHHHHHhccccccccccCCCCCccccccccccC-ChHHHHhHhhhccCCcchhhHHhhhcC-CCCcCCCcchh
Q psy16775        116 TPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFF-TDQGLERHLLGSHGLVTSSMQEAANKG-KDGGRCPVCGR  193 (306)
Q Consensus       116 f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~-~~~~l~~H~~~~h~~~~~~~~~~~h~~-~~~~~C~~C~~  193 (306)
                      +.....+..|++ .|.         ++++|.|++|++.|. +...|..|++             +|.+ +++|.|++|++
T Consensus         6 ~~~~~~~~~h~~-~h~---------~~~~~~C~~C~k~f~~~~~~L~~H~~-------------~h~~~~~~~~C~~C~k   62 (98)
T 2gqj_A            6 SGPGGPEEQWQR-AIH---------ERGEAVCPTCNVVTRKTLVGLKKHME-------------VCQKLQDALKCQHCRK   62 (98)
T ss_dssp             CCCCCSCSHHHH-TTT---------TTSCCCCTTTCCCCSSCSHHHHHHHH-------------HHHHHHHHHSCSSSCC
T ss_pred             CCCCCcHHHHHH-Hhc---------cCCCcCCCCCCCChhhhHHHHHHHHH-------------HHcCCCCCEECCCCCC
Confidence            344445667775 555         788899999999998 8899999988             5566 78899999999


Q ss_pred             hhHHH--HHHHHHhhc
Q psy16775        194 VYQWK--LLNHVARDH  207 (306)
Q Consensus       194 ~f~~~--l~~H~~~~H  207 (306)
                      .|.+.  |.+|++.+|
T Consensus        63 ~F~~~~~L~~H~~~h~   78 (98)
T 2gqj_A           63 QFKSKAGLNYHTMAEH   78 (98)
T ss_dssp             CCSCHHHHHHHHHHHS
T ss_pred             ccCCHHHHHHHHHHHc
Confidence            98877  899984444

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=3.5e-13  Score=90.59  Aligned_cols=57  Identities=18%  Similarity=0.271  Sum_probs=50.2

Q ss_pred             ccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhc
Q psy16775        138 MIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDH  207 (306)
Q Consensus       138 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H  207 (306)
                      .+.++++|.|++|++.|.+...|..|++             +|.++++|.|++|++.|...  |..|++.+|
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   61 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHER-------------IHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH   61 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHG-------------GGCCSCSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHH-------------HcCCCCCEeCCCCCCccCCHHHHHHHHHHHh
Confidence            3458899999999999999999999999             77889999999999999887  999995555

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.34  E-value=4e-12  Score=90.64  Aligned_cols=64  Identities=17%  Similarity=0.256  Sum_probs=57.3

Q ss_pred             CCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCC--------ccccccccccCChHHHHhHhhhccCCcchhhH
Q psy16775        105 TSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPP--------LNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQ  176 (306)
Q Consensus       105 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  176 (306)
                      ..|.|.+|++.|.....|..|++.+|.         ++++        |.|++|++.|.+...|..|++           
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~---------~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~-----------   83 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHV---------GGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-----------   83 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTT---------CCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHH-----------
T ss_pred             CCCcccccccccCCHHHHHHHHHHhcc---------CCCCCCccceeccCCCCCCcccCCHHHHHHHHH-----------
Confidence            358899999999999999999985476         6666        999999999999999999999           


Q ss_pred             HhhhcCCCCcCCCc
Q psy16775        177 EAANKGKDGGRCPV  190 (306)
Q Consensus       177 ~~~h~~~~~~~C~~  190 (306)
                        +|+++++|.|+.
T Consensus        84 --~H~~~k~~~C~~   95 (95)
T 2ej4_A           84 --VHTGEKSGPSSG   95 (95)
T ss_dssp             --HHHTCCCCSSCC
T ss_pred             --hcCCCCCCCCCC
Confidence              888999999963

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=2.1e-13  Score=90.54  Aligned_cols=60  Identities=18%  Similarity=0.328  Sum_probs=51.8

Q ss_pred             cccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhh-cCCCCcCCCcchhhhHHH--HHHHHHhhcC
Q psy16775        137 KMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAAN-KGKDGGRCPVCGRVYQWK--LLNHVARDHN  208 (306)
Q Consensus       137 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h-~~~~~~~C~~C~~~f~~~--l~~H~~~~H~  208 (306)
                      ++|+++++|.|++|++.|.+...|..|++.            .| .++++|.|+.|++.|.+.  |..|++.+|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~------------~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVT------------SHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHH------------HSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHH------------HcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            345689999999999999999999999994            15 588999999999999887  9999966663

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.33  E-value=1.1e-12  Score=84.14  Aligned_cols=54  Identities=22%  Similarity=0.334  Sum_probs=48.4

Q ss_pred             CCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhcc
Q psy16775        105 TSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSH  168 (306)
Q Consensus       105 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  168 (306)
                      .+|.|++|++.|.....|..|++ .|.         ++++|.|++|++.|.+...|..|++.||
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLR-THT---------GEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHH-HHH---------CCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCccCCCCcchhCChHHHHHHHH-HcC---------CCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            45889999999999999999997 666         7899999999999999999999999765

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.32  E-value=6.9e-13  Score=85.19  Aligned_cols=54  Identities=26%  Similarity=0.462  Sum_probs=49.1

Q ss_pred             CcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        185 GGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       185 ~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      ||.|++|++.|...  |..|+ ..|.     ++++|.|++|++.|.+...|.+|+++|+++.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~-~~h~-----~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHI-RTHT-----DVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHH-HHTS-----SCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHH-HhcC-----CCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68999999999987  99999 6777     7789999999999999999999999987653

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=5.9e-13  Score=91.47  Aligned_cols=57  Identities=19%  Similarity=0.381  Sum_probs=51.5

Q ss_pred             cCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcC---CCCcCCCcchhhhHHH--HHHHHHhhcC
Q psy16775        139 IYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKG---KDGGRCPVCGRVYQWK--LLNHVARDHN  208 (306)
Q Consensus       139 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~---~~~~~C~~C~~~f~~~--l~~H~~~~H~  208 (306)
                      |+++++|.|++|++.|.+...|..|++             +|.+   +++|.|++|++.|...  |..|++.+|.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   63 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQR-------------KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP   63 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHH-------------HHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTST
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHH-------------HhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCC
Confidence            458999999999999999999999999             5554   8899999999999987  9999977886

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.29  E-value=4.1e-12  Score=81.49  Aligned_cols=53  Identities=21%  Similarity=0.364  Sum_probs=48.4

Q ss_pred             CCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhcc
Q psy16775        106 SSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSH  168 (306)
Q Consensus       106 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  168 (306)
                      +|.|++|++.|.....|..|++ .|.         ++++|.|++|++.|.+...|..|+++|+
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~C~~~f~~~~~l~~H~~~h~   53 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIR-THT---------DVRPYHCTYCNFSFKTKGNLTKHMKSKA   53 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH-HTS---------SCCCEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHH-hcC---------CCCCccCCCCCchhcCHHHHHHHHHHhc
Confidence            3789999999999999999997 666         7899999999999999999999999544

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=7.7e-13  Score=89.62  Aligned_cols=56  Identities=21%  Similarity=0.542  Sum_probs=51.0

Q ss_pred             hhcCCCCcCCC--cchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhh
Q psy16775        179 ANKGKDGGRCP--VCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSA  240 (306)
Q Consensus       179 ~h~~~~~~~C~--~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~h  240 (306)
                      ++.++++|.|+  .|++.|...  |..|+ ..|.     ++++|.|++||+.|.+...|.+|+++|
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~-~~h~-----~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHI-RIHT-----GQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHH-HHHH-----CCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHH-HhhC-----CCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            67899999997  599999987  99999 6676     778999999999999999999999886

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=2.7e-12  Score=83.28  Aligned_cols=53  Identities=28%  Similarity=0.553  Sum_probs=46.7

Q ss_pred             CCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcC
Q psy16775        184 DGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       184 ~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~  242 (306)
                      ++|.|++|++.|...  |..|+ ..|.     ++++|.|++|++.|.+...|.+|++..|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~-~~h~-----~~~~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHY-RSHT-----NEKPYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHH-HTTT-----SSCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcCcCCCCccccCCHHHHHHHH-HHhC-----CCCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence            479999999999987  99999 6676     77899999999999999999999854443

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=1.4e-11  Score=79.88  Aligned_cols=51  Identities=25%  Similarity=0.328  Sum_probs=46.8

Q ss_pred             CCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhh
Q psy16775        106 SSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLG  166 (306)
Q Consensus       106 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  166 (306)
                      +|.|++|++.|.....|..|++ .|.         ++++|.|++|++.|.+...|..|++.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~C~~~f~~~~~l~~H~~~   52 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYR-SHT---------NEKPYPCGLCNRAFTRRDLLIRHAQK   52 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHH-TTT---------SSCSEECTTTCCEESSHHHHHHHHTT
T ss_pred             cCcCCCCccccCCHHHHHHHHH-HhC---------CCCCccCCCCCCccCCHHHHHHHHHH
Confidence            5889999999999999999997 666         78999999999999999999999753

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.2e-11  Score=75.57  Aligned_cols=45  Identities=18%  Similarity=0.246  Sum_probs=41.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRG-------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGG-------------GTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhh-------------hcCCCCCCCCCCC
Confidence            46778889999999999999999999999999             7889999999988

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.21  E-value=1.2e-11  Score=75.52  Aligned_cols=45  Identities=13%  Similarity=0.186  Sum_probs=41.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQN-------------VHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGG-------------GGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHH-------------HcCCCCCcCCCCC
Confidence            46778889999999999999999999999999             7889999999988

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=1.2e-13  Score=93.47  Aligned_cols=66  Identities=15%  Similarity=0.236  Sum_probs=51.1

Q ss_pred             ccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhcCC
Q psy16775        132 VKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDHNM  209 (306)
Q Consensus       132 ~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~  209 (306)
                      +..|+++|.++++|.|++|++.|.+...|..                    +++|.|+.|++.|.+.  |..|+ ..|. 
T Consensus         6 l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~--------------------~~~~~C~~C~~~f~~~~~l~~H~-~~H~-   63 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------------------RKTPMCEKCRKDSCQEAALNKDE-GNES-   63 (73)
T ss_dssp             CCCCCCCCCCCSEEECSSSCCEEECCCCCCC--------------------SSSCCCHHHHHTCSCCCSSCCCS-SCCC-
T ss_pred             HHHHHHHhCCCCCeeCCcccchhCCHHHhCc--------------------CCCCCCCCCChhhcCHHHHHHHH-Hhhc-
Confidence            3456666778888999999998887766543                    4678888888888877  88888 6676 


Q ss_pred             CCCCCCcceecCcc
Q psy16775        210 SLKPAHLSYKCTVC  223 (306)
Q Consensus       210 ~~~~~~k~~~C~~C  223 (306)
                          ++++|.|++|
T Consensus        64 ----~~~~~~C~~C   73 (73)
T 2ctu_A           64 ----GKKTSGPSSG   73 (73)
T ss_dssp             ----CCCCSSCCCC
T ss_pred             ----CCCCCCCCCC
Confidence                7778888887

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.2e-11  Score=75.55  Aligned_cols=45  Identities=16%  Similarity=0.196  Sum_probs=41.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQR-------------IHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHG-------------GGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            46778889999999999999999999999999             7889999999988

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.21  E-value=1.2e-11  Score=75.64  Aligned_cols=45  Identities=16%  Similarity=0.146  Sum_probs=41.9

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+.+.|..|++             +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQR-------------SHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGG-------------GSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHH-------------HhCCCCCCCCCCC
Confidence            47778889999999999999999999999999             7889999999988

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.2e-11  Score=75.53  Aligned_cols=45  Identities=20%  Similarity=0.209  Sum_probs=41.9

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQR-------------IHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHG-------------GGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHH-------------HhcCCCCCCCCCC
Confidence            47778889999999999999999999999999             7889999999988

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.2e-11  Score=75.61  Aligned_cols=45  Identities=16%  Similarity=0.211  Sum_probs=42.0

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQR-------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHH-------------HHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHH-------------HhCCCCCCCCCCC
Confidence            47788889999999999999999999999999             8889999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.4e-11  Score=75.24  Aligned_cols=45  Identities=13%  Similarity=0.172  Sum_probs=41.7

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR-------------VHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGG-------------GGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHH-------------hcCCCCCCCCCCC
Confidence            36778889999999999999999999999999             7889999999988

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.2e-11  Score=75.54  Aligned_cols=45  Identities=13%  Similarity=0.139  Sum_probs=41.7

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQK-------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGG-------------GTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHH-------------HhCCCCCCCCCCC
Confidence            36778889999999999999999999999999             7889999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.20  E-value=1.3e-11  Score=75.43  Aligned_cols=45  Identities=16%  Similarity=0.208  Sum_probs=41.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQR-------------VHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHH-------------HHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            46778889999999999999999999999999             8889999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.3e-11  Score=75.50  Aligned_cols=45  Identities=13%  Similarity=0.129  Sum_probs=41.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQK-------------IHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHH-------------HTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            47778889999999999999999999999999             7889999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.3e-11  Score=75.46  Aligned_cols=45  Identities=16%  Similarity=0.139  Sum_probs=41.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHER-------------LHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHH-------------HCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHH-------------hcCCCCCCCCCCC
Confidence            47778889999999999999999999999999             7889999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=1.2e-11  Score=75.61  Aligned_cols=45  Identities=13%  Similarity=0.154  Sum_probs=41.9

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQR-------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHT-------------TTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHH-------------HhCCCCCCCCCCC
Confidence            47788889999999999999999999999999             7889999999988

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.4e-11  Score=75.20  Aligned_cols=45  Identities=18%  Similarity=0.158  Sum_probs=41.9

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQR-------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHG-------------GGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHH-------------hcCCCCCCCCCCC
Confidence            47778889999999999999999999999999             7889999999988

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=1.1e-11  Score=74.98  Aligned_cols=44  Identities=14%  Similarity=0.147  Sum_probs=40.9

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      |+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQ-------------THAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHH-------------HHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHH-------------HhCCCCCCCCCCC
Confidence            5677889999999999999999999999999             7889999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.2e-11  Score=75.64  Aligned_cols=45  Identities=18%  Similarity=0.223  Sum_probs=41.9

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+.+.|..|++             +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQR-------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHT-------------TTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHh-------------hcCCCCCCCCCCC
Confidence            47788889999999999999999999999999             7889999999988

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1e-11  Score=75.93  Aligned_cols=45  Identities=16%  Similarity=0.150  Sum_probs=41.9

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+.+.|..|++             +|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLK-------------RHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHH-------------HHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHH-------------HHcCCCCCCCCCC
Confidence            47788889999999999999999999999999             7889999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.4e-11  Score=75.28  Aligned_cols=45  Identities=18%  Similarity=0.265  Sum_probs=41.6

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR-------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHT-------------TTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHH-------------HhCCCCCCCCCCC
Confidence            36778889999999999999999999999999             7889999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=1.5e-11  Score=75.21  Aligned_cols=45  Identities=16%  Similarity=0.272  Sum_probs=41.7

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHM-------------VHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGG-------------GGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHH-------------HhCCCCCCCCCCC
Confidence            36778889999999999999999999999999             7889999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.4e-11  Score=75.30  Aligned_cols=45  Identities=16%  Similarity=0.243  Sum_probs=41.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSM-------------VHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHH-------------HTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            46778889999999999999999999999999             7889999999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.4e-11  Score=75.34  Aligned_cols=45  Identities=16%  Similarity=0.185  Sum_probs=41.9

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQ-------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHH-------------TTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHH-------------HhCCCCCCCCCCC
Confidence            47778889999999999999999999999999             7889999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.6e-11  Score=75.03  Aligned_cols=45  Identities=16%  Similarity=0.175  Sum_probs=41.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK-------------CHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHH-------------HHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHH-------------hcCCCCCCCCCCC
Confidence            46778889999999999999999999999999             8889999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.6e-11  Score=75.08  Aligned_cols=45  Identities=16%  Similarity=0.197  Sum_probs=41.6

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMR-------------THSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHT-------------TTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHH-------------HhCCCCCCCCCCC
Confidence            36778889999999999999999999999999             7889999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.20  E-value=1.4e-11  Score=75.32  Aligned_cols=45  Identities=13%  Similarity=0.163  Sum_probs=41.7

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQK-------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHT-------------GGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHH-------------hcCCCCCCCCCCC
Confidence            46778889999999999999999999999999             7889999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.2e-11  Score=75.62  Aligned_cols=45  Identities=16%  Similarity=0.185  Sum_probs=41.9

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQV-------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHH-------------HHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            47778889999999999999999999999999             7889999999988

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.19  E-value=1.3e-11  Score=75.53  Aligned_cols=45  Identities=16%  Similarity=0.198  Sum_probs=41.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHK-------------LHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHH-------------HHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            36778889999999999999999999999999             7889999999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.4e-11  Score=75.33  Aligned_cols=45  Identities=20%  Similarity=0.290  Sum_probs=41.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQL-------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHT-------------TTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            46778889999999999999999999999999             7889999999988

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.5e-11  Score=75.10  Aligned_cols=45  Identities=16%  Similarity=0.181  Sum_probs=41.7

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQR-------------IHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHT-------------TTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            46778889999999999999999999999999             7889999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.3e-11  Score=75.45  Aligned_cols=45  Identities=16%  Similarity=0.183  Sum_probs=41.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQR-------------THAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHH-------------HHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            46778889999999999999999999999999             7889999999988

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.6e-11  Score=74.93  Aligned_cols=45  Identities=18%  Similarity=0.242  Sum_probs=41.7

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQR-------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHT-------------TTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHH-------------hcCCCCCCCCCCC
Confidence            46778889999999999999999999999999             7889999999988

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.19  E-value=1.7e-11  Score=74.82  Aligned_cols=45  Identities=18%  Similarity=0.206  Sum_probs=41.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQR-------------VHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGG-------------GGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHH-------------HhCCCCCCCCCCC
Confidence            47778889999999999999999999999999             7889999999988

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.7e-11  Score=74.90  Aligned_cols=45  Identities=18%  Similarity=0.298  Sum_probs=41.7

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQR-------------VHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGG-------------GGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            46777889999999999999999999999999             7889999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.5e-11  Score=75.19  Aligned_cols=45  Identities=16%  Similarity=0.223  Sum_probs=41.9

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWR-------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHH-------------HHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHH-------------HHCCCCCCCCCCC
Confidence            46778889999999999999999999999999             7889999999987

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=2.1e-12  Score=87.40  Aligned_cols=51  Identities=20%  Similarity=0.400  Sum_probs=24.2

Q ss_pred             CCCcCC--ccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhh
Q psy16775        105 TSSSNN--NKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLL  165 (306)
Q Consensus       105 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  165 (306)
                      ..|.|+  .|++.|.....|..|++ .|.         ++++|.|++|++.|.+...|..|++
T Consensus        18 ~~~~C~~~~C~k~f~~~~~l~~H~~-~h~---------~~~~~~C~~C~~~f~~~~~l~~H~~   70 (73)
T 1f2i_G           18 RPYACPVESCDRRFSRSDELTRHIR-IHT---------GQKPFQCRICMRNFSRSDHLTTHIR   70 (73)
T ss_dssp             CCEECSSTTBCCEESSHHHHHHHHH-HHH---------CCCCEECTTTCCEESCHHHHHHHHT
T ss_pred             CccCCcCCCCCCccCCHHHHHHHHH-hhC---------CCCCeECCCCCchhCCHHHHHHHHH
Confidence            344453  35555555555555543 333         3444555555555555555555544

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.7e-11  Score=74.93  Aligned_cols=45  Identities=16%  Similarity=0.196  Sum_probs=41.9

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRR-------------IHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHH-------------HHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            47778889999999999999999999999999             8889999999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.3e-11  Score=75.40  Aligned_cols=45  Identities=16%  Similarity=0.166  Sum_probs=41.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQK-------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHH-------------HHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHH-------------hcCCCCCCCCCCC
Confidence            46778889999999999999999999999999             7889999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.7e-11  Score=74.91  Aligned_cols=45  Identities=13%  Similarity=0.108  Sum_probs=41.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQR-------------VHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHT-------------TTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHH-------------HhCCCCCCCCCCC
Confidence            47778889999999999999999999999999             7889999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.4e-11  Score=75.24  Aligned_cols=45  Identities=13%  Similarity=0.196  Sum_probs=41.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQR-------------VHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGG-------------GGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            46778889999999999999999999999999             7889999999988

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.3e-11  Score=75.47  Aligned_cols=45  Identities=18%  Similarity=0.235  Sum_probs=41.9

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRR-------------VHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTH-------------HHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHH-------------hcCCCCCCCCCCC
Confidence            46778889999999999999999999999999             7889999999988

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.9e-11  Score=74.69  Aligned_cols=45  Identities=16%  Similarity=0.272  Sum_probs=41.6

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQR-------------SHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHH-------------HSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHH-------------HhCCCCCCCCCCC
Confidence            36778889999999999999999999999999             7889999999988

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.7e-11  Score=74.99  Aligned_cols=45  Identities=13%  Similarity=0.167  Sum_probs=41.7

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQR-------------LHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHH-------------HHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            36778889999999999999999999999999             7889999999988

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.6e-11  Score=74.97  Aligned_cols=45  Identities=16%  Similarity=0.224  Sum_probs=41.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK-------------VHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHT-------------TSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHH-------------hhCCCCCCCCCCC
Confidence            36778889999999999999999999999999             7889999999988

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.6e-11  Score=74.94  Aligned_cols=45  Identities=13%  Similarity=0.097  Sum_probs=41.7

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQR-------------THVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHH-------------HCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHH-------------HhCCCCCCCCCCC
Confidence            46778889999999999999999999999999             7889999999988

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=2.1e-11  Score=74.52  Aligned_cols=45  Identities=16%  Similarity=0.192  Sum_probs=41.6

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQV-------------LHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHH-------------HHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHH-------------HhCCCCCCCCCCC
Confidence            36778889999999999999999999999999             8889999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.17  E-value=2.4e-11  Score=74.27  Aligned_cols=45  Identities=13%  Similarity=0.099  Sum_probs=41.6

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQR-------------MHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHG-------------GGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            36678889999999999999999999999999             7889999999988

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.9e-11  Score=74.65  Aligned_cols=45  Identities=16%  Similarity=0.193  Sum_probs=41.7

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQR-------------THTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHH-------------HHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            46778889999999999999999999999999             7889999999988

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.7e-11  Score=73.95  Aligned_cols=45  Identities=16%  Similarity=0.180  Sum_probs=41.4

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQK-------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHT-------------TTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            46778889999999999999999999999999             7889999999876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.3e-11  Score=74.32  Aligned_cols=44  Identities=14%  Similarity=0.161  Sum_probs=41.2

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      |+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQR-------------VHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHH-------------HHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHH-------------HHcCCCCCCCCCC
Confidence            5677889999999999999999999999999             8889999999988

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.14  E-value=2.1e-11  Score=86.86  Aligned_cols=61  Identities=26%  Similarity=0.377  Sum_probs=44.0

Q ss_pred             CCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCC--------cCCCcchhhhHHH--HHHHHHhhcCCCCC
Q psy16775        143 PPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDG--------GRCPVCGRVYQWK--LLNHVARDHNMSLK  212 (306)
Q Consensus       143 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~--------~~C~~C~~~f~~~--l~~H~~~~H~~~~~  212 (306)
                      ..|.|++|++.|.+...|..|++.+            |.++++        |.|++|++.|...  |..|+ +.|.    
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~------------H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~-~~H~----   86 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTME------------HVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI-RVHT----   86 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHT------------TTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHH-HHHH----
T ss_pred             CCCcccccccccCCHHHHHHHHHHh------------ccCCCCCCccceeccCCCCCCcccCCHHHHHHHH-HhcC----
Confidence            4578999999999999999998831            566666        6777777777665  77776 5555    


Q ss_pred             CCCcceecC
Q psy16775        213 PAHLSYKCT  221 (306)
Q Consensus       213 ~~~k~~~C~  221 (306)
                       ++++|.|+
T Consensus        87 -~~k~~~C~   94 (95)
T 2ej4_A           87 -GEKSGPSS   94 (95)
T ss_dssp             -TCCCCSSC
T ss_pred             -CCCCCCCC
Confidence             56667664

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.5e-11  Score=72.98  Aligned_cols=45  Identities=18%  Similarity=0.263  Sum_probs=41.4

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLR-------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHH-------------HHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHH-------------HhCCCCCCCCCCC
Confidence            36778889999999999999999999999999             8889999999876

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=1.8e-11  Score=81.14  Aligned_cols=57  Identities=16%  Similarity=0.388  Sum_probs=49.4

Q ss_pred             hcCCCCcCCCcchhhhHHH-HHHHHHhhcCCCCCCCCcceecC-ccCcccCCHHHHHhhHhhhcCC
Q psy16775        180 NKGKDGGRCPVCGRVYQWK-LLNHVARDHNMSLKPAHLSYKCT-VCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       180 h~~~~~~~C~~C~~~f~~~-l~~H~~~~H~~~~~~~~k~~~C~-~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      .-++++|.|+.|++.|... |..|+ +. .     +++||.|+ .||+.|..+..|..|+++|...
T Consensus         5 ~C~~~~~~C~~C~k~f~~~~L~~H~-~~-~-----~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFVFDTIQSHQ-YQ-C-----PRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCCCEEECSSSCCEEEHHHHHHHH-HH-C-----SSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             cCCCCCeeccccCCccCHHHHHHHH-HH-c-----CCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            3567899999999999933 99999 54 5     78899999 9999999999999999987554

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=9.3e-11  Score=71.81  Aligned_cols=46  Identities=17%  Similarity=0.236  Sum_probs=40.9

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++.            +|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~------------~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRY------------YHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTT------------TTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHh------------hcCCCCCCCCCCC
Confidence            467788899999999999999999999999983            4578899999987

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.08  E-value=1e-10  Score=69.81  Aligned_cols=42  Identities=19%  Similarity=0.320  Sum_probs=38.6

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP  189 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~  189 (306)
                      |+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQR-------------THAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHG-------------GGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHH-------------hcCCCCCCCCC
Confidence            5677789999999999999999999999999             78899999985

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.08  E-value=9.3e-11  Score=71.55  Aligned_cols=44  Identities=16%  Similarity=0.237  Sum_probs=40.5

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQR-------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHH-------------HHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHH-------------HhCCCCCCCCCC
Confidence            47778889999999999999999999999999             888999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.2e-10  Score=71.05  Aligned_cols=44  Identities=18%  Similarity=0.235  Sum_probs=40.3

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRG-------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHT-------------TTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHH-------------hhCCCCCCCCCC
Confidence            46778889999999999999999999999999             788999999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=9.4e-11  Score=71.49  Aligned_cols=44  Identities=16%  Similarity=0.203  Sum_probs=40.2

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      ++++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQR-------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHT-------------TTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHH-------------HhCCCCCCCCCCC
Confidence            3566779999999999999999999999999             7889999999988

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.3e-10  Score=70.88  Aligned_cols=44  Identities=18%  Similarity=0.258  Sum_probs=40.4

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQR-------------VHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGG-------------GGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHH-------------HcCCCCCCCCCC
Confidence            46778889999999999999999999999999             788999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.3e-10  Score=70.84  Aligned_cols=44  Identities=18%  Similarity=0.249  Sum_probs=40.3

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRG-------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHT-------------TTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhH-------------hcCCCCCCCCCC
Confidence            46778889999999999999999999999999             788999999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1.1e-10  Score=71.24  Aligned_cols=44  Identities=18%  Similarity=0.217  Sum_probs=40.4

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRR-------------SHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHH-------------HHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHH-------------hcCCCCCCCCCC
Confidence            36778889999999999999999999999999             888999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.6e-10  Score=70.48  Aligned_cols=44  Identities=18%  Similarity=0.316  Sum_probs=40.3

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQR-------------VHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGG-------------GGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHH-------------hcCCCCCCCCCC
Confidence            47778889999999999999999999999999             788999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.3e-10  Score=70.87  Aligned_cols=44  Identities=16%  Similarity=0.246  Sum_probs=40.5

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQK-------------THTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHH-------------HHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHH-------------HhCCCCCCCCCC
Confidence            47778889999999999999999999999999             788999999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.4e-10  Score=70.77  Aligned_cols=43  Identities=19%  Similarity=0.233  Sum_probs=39.7

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      |+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHS-------------VHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTT-------------TTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHH-------------hcCCCCCCCCCC
Confidence            6778889999999999999999999999999             788999999974

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.06  E-value=1.1e-10  Score=70.89  Aligned_cols=42  Identities=24%  Similarity=0.494  Sum_probs=39.3

Q ss_pred             ccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcch
Q psy16775        138 MIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCG  192 (306)
Q Consensus       138 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~  192 (306)
                      .|+++++|.|++|++.|.....|..|++             +|+++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~-------------~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVR-------------SHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHH-------------HHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHH-------------HccCCCCCCCcCCC
Confidence            4569999999999999999999999999             88899999999996

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.3e-10  Score=70.88  Aligned_cols=44  Identities=14%  Similarity=0.129  Sum_probs=40.2

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQR-------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHT-------------TTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHH-------------HhCCCCCCCCCC
Confidence            36778889999999999999999999999999             788999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.5e-10  Score=70.58  Aligned_cols=44  Identities=16%  Similarity=0.170  Sum_probs=40.3

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQK-------------IHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHT-------------TTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHH-------------HhCCCCCCCCCC
Confidence            46778889999999999999999999999999             788999999974

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=8e-11  Score=71.84  Aligned_cols=43  Identities=14%  Similarity=0.214  Sum_probs=39.8

Q ss_pred             ccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        136 PKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       136 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      +++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWI-------------THTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHT-------------HHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            456779999999999999999999999999             7888999999988

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.5e-10  Score=68.98  Aligned_cols=42  Identities=19%  Similarity=0.305  Sum_probs=38.4

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP  189 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~  189 (306)
                      |+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQK-------------MHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHH-------------HTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHH-------------HhCCCCCCCCC
Confidence            5667789999999999999999999999999             78899999984

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.6e-10  Score=70.47  Aligned_cols=44  Identities=16%  Similarity=0.256  Sum_probs=40.3

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQR-------------IHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHG-------------GGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHH-------------HhCCCCCCCCCC
Confidence            46778889999999999999999999999999             788999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.5e-10  Score=70.60  Aligned_cols=44  Identities=18%  Similarity=0.271  Sum_probs=40.3

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRR-------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGG-------------GTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHH-------------hcCCCCCcCCCC
Confidence            46778889999999999999999999999999             788999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.3e-10  Score=70.81  Aligned_cols=44  Identities=16%  Similarity=0.237  Sum_probs=40.4

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQA-------------THSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHH-------------HHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHH-------------HcCCCCCCCCCC
Confidence            46778889999999999999999999999999             788999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.5e-10  Score=70.59  Aligned_cols=44  Identities=16%  Similarity=0.271  Sum_probs=40.4

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQV-------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHT-------------TTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHH-------------HhCCCCCCCCCC
Confidence            47788889999999999999999999999999             788999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.7e-10  Score=70.34  Aligned_cols=44  Identities=14%  Similarity=0.166  Sum_probs=40.2

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQR-------------VHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHT-------------TTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHH-------------HcCCCCCCCCCC
Confidence            46778889999999999999999999999999             788999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.4e-10  Score=70.63  Aligned_cols=44  Identities=20%  Similarity=0.274  Sum_probs=40.2

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQR-------------THTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHH-------------TSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHH-------------HhCCCCCCCCCC
Confidence            46778889999999999999999999999999             788999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.6e-10  Score=70.40  Aligned_cols=44  Identities=14%  Similarity=0.197  Sum_probs=40.2

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQR-------------IHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHG-------------GGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHh-------------HhCCCCCCCCCC
Confidence            47788889999999999999999999999999             788999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.7e-10  Score=70.30  Aligned_cols=44  Identities=14%  Similarity=0.208  Sum_probs=40.1

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQR-------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHH-------------HHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHH-------------HcCCCCCCCCCC
Confidence            36777889999999999999999999999999             888999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.8e-10  Score=70.23  Aligned_cols=44  Identities=16%  Similarity=0.237  Sum_probs=40.2

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQR-------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHT-------------TTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHH-------------HcCCCCCCCCCC
Confidence            46778889999999999999999999999999             788999999974

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=1.3e-10  Score=71.64  Aligned_cols=43  Identities=21%  Similarity=0.238  Sum_probs=39.4

Q ss_pred             ccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchh
Q psy16775        138 MIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGR  193 (306)
Q Consensus       138 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~  193 (306)
                      .+.++++|.|++|++.|.+...|..|++             +|+++++|.|++|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKL-------------SHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGG-------------GSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHH-------------hcCCCCCccCCCCCC
Confidence            3458899999999999999999999999             788999999999985

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.5e-10  Score=70.60  Aligned_cols=44  Identities=20%  Similarity=0.335  Sum_probs=40.3

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQR-------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHH-------------HHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHH-------------hcCCCCCCCCCC
Confidence            46778889999999999999999999999999             788999999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.5e-10  Score=69.75  Aligned_cols=43  Identities=19%  Similarity=0.273  Sum_probs=39.4

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP  189 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~  189 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQK-------------THSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHT-------------TSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHH-------------HcCCCCCCCCC
Confidence            36778889999999999999999999999999             77889999985

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.03  E-value=1.1e-10  Score=73.90  Aligned_cols=47  Identities=19%  Similarity=0.232  Sum_probs=39.7

Q ss_pred             ccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhH
Q psy16775        138 MIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQ  196 (306)
Q Consensus       138 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~  196 (306)
                      .+.++++|.|++|++.|.+...|..|++.            +|.++++|.|++|++.|.
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~------------~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQ------------VHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHH------------TSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHH------------hcCCCCCccCCCCCCCCC
Confidence            35688999999999999999999999862            567788888888888875

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2e-10  Score=69.20  Aligned_cols=43  Identities=19%  Similarity=0.227  Sum_probs=39.5

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP  189 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~  189 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTR-------------THTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHT-------------TTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhh-------------hcCCCCCCCCC
Confidence            46778889999999999999999999999999             78899999985

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2e-10  Score=68.45  Aligned_cols=41  Identities=17%  Similarity=0.289  Sum_probs=38.2

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCC
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRC  188 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C  188 (306)
                      |+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR-------------VHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGG-------------GTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHH-------------HhCCCCCCCC
Confidence            6677889999999999999999999999999             7889999988

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.2e-10  Score=69.07  Aligned_cols=43  Identities=23%  Similarity=0.345  Sum_probs=39.5

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP  189 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~  189 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQR-------------THTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHH-------------HTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHH-------------HhCCCCCCCCC
Confidence            46778889999999999999999999999999             78899999985

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.1e-10  Score=69.94  Aligned_cols=42  Identities=17%  Similarity=0.328  Sum_probs=39.2

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP  189 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~  189 (306)
                      |+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKR-------------VHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHH-------------HCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHH-------------HhCCCCCCCCC
Confidence            6778889999999999999999999999999             78899999996

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.9e-10  Score=70.12  Aligned_cols=44  Identities=16%  Similarity=0.201  Sum_probs=40.1

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLR-------------VHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHH-------------HHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHH-------------HhCCCCCCCCCC
Confidence            46778889999999999999999999999999             788999999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2e-10  Score=69.98  Aligned_cols=43  Identities=19%  Similarity=0.296  Sum_probs=39.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP  189 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~  189 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQ-------------SHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHH-------------HHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHH-------------HcCCCCCCCCC
Confidence            47778889999999999999999999999999             88899999996

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=2.6e-10  Score=68.73  Aligned_cols=43  Identities=23%  Similarity=0.281  Sum_probs=39.6

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP  189 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~  189 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQK-------------THAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGG-------------GGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHH-------------HcCCCCCcCCC
Confidence            46778889999999999999999999999999             78899999985

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=2.5e-10  Score=68.06  Aligned_cols=41  Identities=24%  Similarity=0.332  Sum_probs=38.0

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCC
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRC  188 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C  188 (306)
                      |+++|+++++|.|++|++.|.+.+.|..|++             +|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLR-------------IHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTT-------------TTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHH-------------hcCCCCCCCC
Confidence            5677889999999999999999999999999             7889999988

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=2.2e-10  Score=69.06  Aligned_cols=43  Identities=21%  Similarity=0.265  Sum_probs=39.5

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP  189 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~  189 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER-------------THARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHH-------------HCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhH-------------hcCCCCCCCCC
Confidence            47778889999999999999999999999999             78899999984

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.00  E-value=1.1e-10  Score=78.65  Aligned_cols=56  Identities=21%  Similarity=0.485  Sum_probs=49.3

Q ss_pred             hhcCCCCcCCCc--chhhhHHH--HHHHHHhhcCCCCCCCCcceecCc--cCcccCCHHHHHhhHhhh
Q psy16775        179 ANKGKDGGRCPV--CGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTV--CTATFGMYRQFENHVYSA  240 (306)
Q Consensus       179 ~h~~~~~~~C~~--C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~--C~~~f~~~~~L~~H~~~h  240 (306)
                      .....++|.|..  |++.|...  |..|+ ..|.     ++++|.|.+  |++.|.+...|.+|+++|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~-----~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHT-RTHT-----GEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHH-HHHS-----SSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHH-HhcC-----CCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            456678999998  99999987  99999 7776     788999975  999999999999999764

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=3e-10  Score=69.20  Aligned_cols=44  Identities=16%  Similarity=0.252  Sum_probs=39.8

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|+.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQR-------------VHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGG-------------GSCCSCCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHH-------------HhCCCCCCCCCC
Confidence            36677889999999999999999999999999             788999999963

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.9e-10  Score=69.21  Aligned_cols=44  Identities=18%  Similarity=0.259  Sum_probs=40.1

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQA-------------IHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHT-------------TSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHH-------------HhCCCCCCCCCC
Confidence            46778889999999999999999999999999             788999999963

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.1e-10  Score=68.39  Aligned_cols=41  Identities=22%  Similarity=0.398  Sum_probs=38.2

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCC
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRC  188 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C  188 (306)
                      |+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVL-------------IHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTH-------------HHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHH-------------HcCCCCCCCC
Confidence            6677889999999999999999999999999             7889999988

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2.5e-10  Score=69.55  Aligned_cols=44  Identities=16%  Similarity=0.184  Sum_probs=40.2

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcC-CCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKG-KDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~-~~~~~C~~  190 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|++ +++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHER-------------IHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHT-------------TCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHH-------------HcCCCCCCCCCCC
Confidence            47788889999999999999999999999999             7888 99999974

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.00  E-value=2.8e-10  Score=67.77  Aligned_cols=41  Identities=15%  Similarity=0.162  Sum_probs=37.9

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCC
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRC  188 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C  188 (306)
                      |+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~-------------~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQR-------------SCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHH-------------HTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhh-------------hcCCCCCCCC
Confidence            5677789999999999999999999999999             7889999988

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.99  E-value=9.6e-11  Score=74.21  Aligned_cols=46  Identities=20%  Similarity=0.332  Sum_probs=40.9

Q ss_pred             hhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCC
Q psy16775        179 ANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGM  229 (306)
Q Consensus       179 ~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~  229 (306)
                      .|.++++|.|++|++.|...  |.+|++..|.     ++++|.|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~-----~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHT-----SERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSC-----CCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcC-----CCCCccCCCCCCCCCC
Confidence            56889999999999999887  9999954887     7889999999999975

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.99  E-value=6.4e-11  Score=77.38  Aligned_cols=48  Identities=19%  Similarity=0.329  Sum_probs=38.7

Q ss_pred             cccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhH
Q psy16775        133 KIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQ  196 (306)
Q Consensus       133 ~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~  196 (306)
                      ..|+++|+++++|.|++|++.|.....|.   +             +|.++++|.|++||+.|.
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~-------------~H~~~k~~~C~~C~k~f~   50 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---L-------------FDPMTGTFRCTFCHTEVE   50 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---H-------------EETTTTEEBCSSSCCBCE
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---h-------------hcCCCCCEECCCCCCccc
Confidence            45777888999999999999999888776   4             667777788888877764

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.3e-10  Score=69.75  Aligned_cols=44  Identities=16%  Similarity=0.202  Sum_probs=40.1

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .|+++|.++++|.|++|++.|.+...|..|++             +|+++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLR-------------LHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHH-------------HHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHH-------------HhCCCCCCCCCC
Confidence            46778889999999999999999999999999             788899999973

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=4e-10  Score=67.92  Aligned_cols=42  Identities=19%  Similarity=0.222  Sum_probs=38.7

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP  189 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~  189 (306)
                      |+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQA-------------LHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHH-------------HHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHH-------------HHCCCCCCCCC
Confidence            5677889999999999999999999999999             88899999985

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.6e-11  Score=82.81  Aligned_cols=61  Identities=16%  Similarity=0.127  Sum_probs=52.5

Q ss_pred             CCCCCCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhh
Q psy16775        101 SSSSTSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAAN  180 (306)
Q Consensus       101 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h  180 (306)
                      ..+..+|.|++|++.|.....|..                 +++|.|++|++.|.+...|..|++             +|
T Consensus        13 h~~~~~~~C~~C~k~f~~~~~l~~-----------------~~~~~C~~C~~~f~~~~~l~~H~~-------------~H   62 (73)
T 2ctu_A           13 HLGDRSQKCSKCGIIFIRRSTLSR-----------------RKTPMCEKCRKDSCQEAALNKDEG-------------NE   62 (73)
T ss_dssp             CCCCSEEECSSSCCEEECCCCCCC-----------------SSSCCCHHHHHTCSCCCSSCCCSS-------------CC
T ss_pred             hCCCCCeeCCcccchhCCHHHhCc-----------------CCCCCCCCCChhhcCHHHHHHHHH-------------hh
Confidence            344567999999999988766555                 458999999999999999999999             77


Q ss_pred             cCCCCcCCCcc
Q psy16775        181 KGKDGGRCPVC  191 (306)
Q Consensus       181 ~~~~~~~C~~C  191 (306)
                      .++++|.|++|
T Consensus        63 ~~~~~~~C~~C   73 (73)
T 2ctu_A           63 SGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCSSCCCC
T ss_pred             cCCCCCCCCCC
Confidence            89999999988

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.97  E-value=8.1e-10  Score=74.24  Aligned_cols=54  Identities=24%  Similarity=0.346  Sum_probs=48.0

Q ss_pred             CCCCCcCCc--cCcCCCChHHHHHHHHHhccccccccccCCCCCccccc--cccccCChHHHHhHhhh
Q psy16775        103 SSTSSSNNN--KVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQK--CQFRFFTDQGLERHLLG  166 (306)
Q Consensus       103 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~  166 (306)
                      ....|.|..  |++.|.....|..|++ .|.         ++++|.|++  |++.|.+...|..|+++
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~---------~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLKAHTR-THT---------GEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHHHHHH-HHS---------SSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             ccCceeCCCCCCccccCCHHHHHHHHH-hcC---------CCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            445688988  9999999999999997 666         789999975  99999999999999983

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.1e-10  Score=68.42  Aligned_cols=43  Identities=21%  Similarity=0.223  Sum_probs=39.6

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP  189 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~  189 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQK-------------IHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHH-------------HHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHH-------------HhCCCCCCCCC
Confidence            47788889999999999999999999999999             88899999984

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.6e-10  Score=69.50  Aligned_cols=43  Identities=19%  Similarity=0.296  Sum_probs=39.6

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP  189 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~  189 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLR-------------SHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHH-------------HHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHH-------------HhCCCCCCCCC
Confidence            47778889999999999999999999999999             78889999996

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=5.4e-10  Score=68.64  Aligned_cols=44  Identities=20%  Similarity=0.336  Sum_probs=40.4

Q ss_pred             cccccCCCCCcccc--ccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcc
Q psy16775        135 HPKMIYNRPPLNCQ--KCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVC  191 (306)
Q Consensus       135 h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C  191 (306)
                      |.++|+++++|.|.  .|++.|.....|..|++             +|+++++|.|++|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRR-------------SHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHT-------------TSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHH-------------HhCCCCCCCCCCC
Confidence            45677899999998  89999999999999999             7889999999988

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2e-10  Score=75.96  Aligned_cols=50  Identities=18%  Similarity=0.301  Sum_probs=45.6

Q ss_pred             CCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCcccc-ccccccCChHHHHhHhhh
Q psy16775        105 TSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQ-KCQFRFFTDQGLERHLLG  166 (306)
Q Consensus       105 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~-~C~~~f~~~~~l~~H~~~  166 (306)
                      .+|.|..|++.|. ...|..|++ . .         +++||.|+ .|++.|...+.|..|+++
T Consensus         9 ~~~~C~~C~k~f~-~~~L~~H~~-~-~---------~~~p~~C~~~C~k~f~~~~~L~~H~~~   59 (66)
T 2eod_A            9 RTQPCTYCTKEFV-FDTIQSHQY-Q-C---------PRLPVACPNQCGVGTVAREDLPGHLKD   59 (66)
T ss_dssp             CEEECSSSCCEEE-HHHHHHHHH-H-C---------SSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred             CCeeccccCCccC-HHHHHHHHH-H-c---------CCcCccCCcccCcccccHHHHHHHHHh
Confidence            3588889999999 999999997 4 5         78999999 999999999999999994

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=6.7e-10  Score=67.64  Aligned_cols=42  Identities=12%  Similarity=0.144  Sum_probs=38.4

Q ss_pred             ccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        136 PKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       136 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      +++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRR-------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHH-------------HHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHH-------------HhCCCCCCCCCC
Confidence            466779999999999999999999999999             888999999974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=6e-10  Score=67.51  Aligned_cols=42  Identities=19%  Similarity=0.336  Sum_probs=38.2

Q ss_pred             ccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        136 PKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       136 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .++|+++++|.|++|++.|.+...|..|++             +|.++++|.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQR-------------IHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHT-------------TTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHH-------------HhCCCCCCCCCC
Confidence            456779999999999999999999999999             788999999974

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=7.8e-10  Score=66.64  Aligned_cols=43  Identities=19%  Similarity=0.223  Sum_probs=39.0

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCC
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCP  189 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~  189 (306)
                      .|+++|+++++|.|++|++.|.+...|..|++             +|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-------------~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHER-------------THAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHG-------------GGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHh-------------HhcCCCCCCCC
Confidence            46778889999999999999999999999999             78899999873

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.93  E-value=8.5e-10  Score=66.14  Aligned_cols=41  Identities=22%  Similarity=0.425  Sum_probs=37.5

Q ss_pred             cccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        137 KMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       137 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      ++|+++++|.|++|++.|.+...|..|++             +|+++++|.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTL-------------QTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHH-------------HHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHH-------------hhCCCCCccCCC
Confidence            45679999999999999999999999999             888999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1.5e-09  Score=64.18  Aligned_cols=39  Identities=18%  Similarity=0.221  Sum_probs=35.7

Q ss_pred             cccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCC
Q psy16775        137 KMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRC  188 (306)
Q Consensus       137 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C  188 (306)
                      ++|+++++|.|++|++.|.....|..|++             +|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHER-------------IHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGG-------------GCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHH-------------HhCCCCCcCC
Confidence            35669999999999999999999999999             7889999988

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.88  E-value=3.9e-11  Score=78.45  Aligned_cols=47  Identities=15%  Similarity=0.300  Sum_probs=40.1

Q ss_pred             hhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHH
Q psy16775        179 ANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFE  234 (306)
Q Consensus       179 ~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~  234 (306)
                      +|+++++|.|+.||+.|...  |.    ..|.     ++++|.|++||+.|.+..++.
T Consensus         8 ~H~~~k~~~C~~C~k~F~~~~~l~----~~H~-----~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            8 DSTNRASFKCPVCSSTFTDLEANQ----LFDP-----MTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             SCCSSSEEECSSSCCEEEHHHHHH----HEET-----TTTEEBCSSSCCBCEECTTCS
T ss_pred             HcCCCCCccCCCCCchhccHHHhH----hhcC-----CCCCEECCCCCCccccCcccc
Confidence            78899999999999999887  54    5676     888999999999998766544

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.86  E-value=1.1e-09  Score=66.55  Aligned_cols=43  Identities=16%  Similarity=0.315  Sum_probs=35.9

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emk_A            2 SSG-SSGTGE-----KPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCC-CCCSSS-----CSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCC-CccCCC-----CceECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            466 667766     9999999999999999999999999887555443

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.3e-09  Score=66.28  Aligned_cols=43  Identities=16%  Similarity=0.247  Sum_probs=35.8

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|++++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eq4_A            2 SSG-SSGTGE-----KLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS   44 (46)
T ss_dssp             CCC-CCSSCC-----CCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCC
T ss_pred             CCc-ccCCCC-----CCeECCCCCCccCchHHHHHHHHhcCCCCCCCCC
Confidence            366 667766     9999999999999999999999999887555443

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.3e-09  Score=66.24  Aligned_cols=42  Identities=17%  Similarity=0.297  Sum_probs=35.5

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytj_A            2 SSG-SSGTGE-----KPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP   43 (46)
T ss_dssp             CSS-CTTSSC-----CSEECSSSCCEESSHHHHHHHHHHTSCCCCSSC
T ss_pred             Ccc-cCCCCC-----cCeECCCCChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            466 677766     999999999999999999999999988655444

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.2e-09  Score=66.41  Aligned_cols=43  Identities=19%  Similarity=0.366  Sum_probs=35.8

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|++++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eml_A            2 SSG-SSGTGE-----KPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS   44 (46)
T ss_dssp             CCC-CCCSSC-----CSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSS
T ss_pred             Ccc-CCcCCC-----CCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            466 667766     9999999999999999999999999887555443

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.5e-09  Score=65.99  Aligned_cols=43  Identities=16%  Similarity=0.264  Sum_probs=35.8

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eov_A            2 SSG-SSGTGE-----KPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS   44 (46)
T ss_dssp             CCC-CCCSSC-----CSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSC
T ss_pred             CCC-CCCCCC-----CCccCCccChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            466 667766     9999999999999999999999999887555443

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.2e-09  Score=66.39  Aligned_cols=43  Identities=19%  Similarity=0.311  Sum_probs=35.6

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|++++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytn_A            2 SSG-SSGTGK-----KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCC-CCCSCC-----SSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred             CCC-cCCCCC-----cCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence            356 667766     9999999999999999999999999887555443

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.84  E-value=1.2e-09  Score=66.47  Aligned_cols=43  Identities=21%  Similarity=0.348  Sum_probs=35.9

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ema_A            2 SSG-SSGTGE-----KRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CSC-SSCTTS-----CCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSS
T ss_pred             CCc-cCCCCC-----cCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            466 667766     9999999999999999999999999887555443

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.5e-09  Score=66.01  Aligned_cols=43  Identities=19%  Similarity=0.362  Sum_probs=35.8

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep2_A            2 SSG-SSGTGE-----KPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS   44 (46)
T ss_dssp             CSS-SCSSCC-----CSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSC
T ss_pred             CCC-CCCCCC-----cCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            466 667766     9999999999999999999999999887555443

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.4e-09  Score=66.04  Aligned_cols=43  Identities=16%  Similarity=0.215  Sum_probs=35.9

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emm_A            2 SSG-SSGTGE-----RPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCC-SCSSCC-----CSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSS
T ss_pred             CCc-CCcCCC-----CCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            466 667766     9999999999999999999999999887555443

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.2e-09  Score=66.36  Aligned_cols=43  Identities=16%  Similarity=0.281  Sum_probs=35.7

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSG-SSGTGE-----KPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCC-SSSSCC-----CSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCC-CCCCCC-----CCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            466 677766     9999999999999999999999999886555443

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.4e-09  Score=66.20  Aligned_cols=43  Identities=19%  Similarity=0.314  Sum_probs=35.7

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emy_A            2 SSG-SSGTGE-----NPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS   44 (46)
T ss_dssp             CCC-CCCCSS-----CCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSS
T ss_pred             CCC-CCCCCC-----cCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCC
Confidence            466 667766     9999999999999999999999999887555443

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.4e-09  Score=66.07  Aligned_cols=43  Identities=16%  Similarity=0.250  Sum_probs=35.5

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eop_A            2 SSG-SSGTGE-----KPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCC-CSCCCC-----CSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCC
T ss_pred             CCc-cccCCC-----CCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            466 667766     9999999999999999999999998886554443

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.5e-09  Score=66.01  Aligned_cols=43  Identities=23%  Similarity=0.400  Sum_probs=35.7

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoe_A            2 SSG-SSGTGE-----KPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS   44 (46)
T ss_dssp             CCS-SCCCCC-----CSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSC
T ss_pred             CCC-CCCCCC-----CCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            366 667766     9999999999999999999999999887555443

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.7e-09  Score=65.04  Aligned_cols=40  Identities=15%  Similarity=0.326  Sum_probs=33.6

Q ss_pred             hhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         21 RDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        21 ~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         3 ~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (44)
T 2emx_A            3 SGSSGE-----KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS   42 (44)
T ss_dssp             CCCSSC-----CCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCC
T ss_pred             CCcCCC-----cCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            566665     9999999999999999999999999887554443

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.2e-09  Score=66.51  Aligned_cols=42  Identities=19%  Similarity=0.248  Sum_probs=35.3

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            2 SSG-SSGTGE-----KPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCC-CCCCSC-----CCEECSSSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             Ccc-cccCCC-----CCEECcccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            466 667766     999999999999999999999999988755444

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.7e-09  Score=65.77  Aligned_cols=42  Identities=17%  Similarity=0.366  Sum_probs=35.1

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|++++++.|
T Consensus         2 ~H~-~~H~~~-----~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoq_A            2 SSG-SSGTGE-----KPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP   43 (46)
T ss_dssp             CCC-CCSSSS-----CSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSC
T ss_pred             CCC-CCCCCC-----CCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            366 667666     999999999999999999999999988655444

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.82  E-value=2.1e-09  Score=65.35  Aligned_cols=42  Identities=17%  Similarity=0.270  Sum_probs=35.0

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      |+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         3 H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ely_A            3 SG-SSGTGE-----KPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS   44 (46)
T ss_dssp             CC-CCCCCC-----CSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCC
T ss_pred             CC-CCCCCC-----CCcccCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            55 667666     9999999999999999999999999887555443

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.5e-09  Score=66.02  Aligned_cols=42  Identities=17%  Similarity=0.272  Sum_probs=35.2

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      |+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         3 H~-~~H~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emf_A            3 SG-SSGTGG-----KHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CC-SSSSSS-----CCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCC
T ss_pred             cc-cccCCC-----CCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            56 667766     9999999999999999999999999887555443

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.82  E-value=1.4e-09  Score=66.18  Aligned_cols=43  Identities=16%  Similarity=0.260  Sum_probs=35.5

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em0_A            2 SSG-SSGMGE-----KTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS   44 (46)
T ss_dssp             CCC-CCSCCC-----CCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred             CCc-CccCCC-----cCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence            366 667766     9999999999999999999999999887555443

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.4e-09  Score=66.06  Aligned_cols=43  Identities=21%  Similarity=0.353  Sum_probs=35.7

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     ++|.|..|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytk_A            2 SSG-SSGSGE-----KPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS   44 (46)
T ss_dssp             CCC-CCSSSS-----CSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCC
T ss_pred             CCc-ccCCCC-----CCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCC
Confidence            366 667766     9999999999999999999999999887555443

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.82  E-value=5.9e-10  Score=70.47  Aligned_cols=52  Identities=17%  Similarity=0.197  Sum_probs=44.1

Q ss_pred             CcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcC
Q psy16775        113 VKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGR  187 (306)
Q Consensus       113 ~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~  187 (306)
                      ++.|.....|..|++ .|.         ++++|.|++|++.|...+.|..|++             +|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~-~H~---------~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRS-RSQ---------SEQPATCPICYAVIRQSRNLRRHLE-------------LRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHH-HHT---------SSCCEECTTTCCEESSHHHHHHHHH-------------HHTTTSCCC
T ss_pred             ccccCCCcchhhHHH-hcC---------CCCCccCCCCCcccCCHHHHHHHHH-------------HhccCCCCC
Confidence            456777777888886 665         8999999999999999999999999             778888874

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.4e-09  Score=66.09  Aligned_cols=43  Identities=16%  Similarity=0.276  Sum_probs=35.6

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      .|+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSG-SSGTGE-----RHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCC-CSSCCC-----CCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             Ccc-cCcCCC-----CCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            366 667766     9999999999999999999999999887555443

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2e-09  Score=65.41  Aligned_cols=42  Identities=14%  Similarity=0.240  Sum_probs=34.9

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      |+ +.|.++     ++|.|.+|++.|.....|..|+++|++++++.|.
T Consensus         3 H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epz_A            3 SG-SSGTGE-----KPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CC-SSCCCC-----CSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSC
T ss_pred             CC-CCcCCC-----CCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCC
Confidence            55 667666     9999999999999999999999999887555443

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.7e-09  Score=65.71  Aligned_cols=43  Identities=19%  Similarity=0.397  Sum_probs=35.8

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSG-SSGTGE-----KPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCC-CCCSSC-----CSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCC-CCCCCC-----cCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            366 667766     9999999999999999999999999887555443

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.82  E-value=1.3e-09  Score=66.27  Aligned_cols=43  Identities=26%  Similarity=0.412  Sum_probs=35.6

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|++++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2el4_A            2 SSG-SSGTGV-----KPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS   44 (46)
T ss_dssp             CCC-CCSCCC-----CSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCT
T ss_pred             ccc-cCCCCC-----CceECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            466 667666     9999999999999999999999999887555443

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.8e-09  Score=65.56  Aligned_cols=43  Identities=19%  Similarity=0.186  Sum_probs=35.5

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epw_A            2 SSG-SSGTGE-----KPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS   44 (46)
T ss_dssp             CCC-CCCCCC-----CSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCC
T ss_pred             cCc-ccCCCC-----CCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            466 667666     9999999999999999999999999887554443

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.2e-09  Score=66.42  Aligned_cols=43  Identities=21%  Similarity=0.310  Sum_probs=35.9

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emh_A            2 SSG-SSGTGE-----RPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCC-CSCSCC-----CSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSC
T ss_pred             CCC-CCCCCC-----CCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            466 667766     9999999999999999999999999887555443

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.7e-09  Score=65.77  Aligned_cols=43  Identities=19%  Similarity=0.347  Sum_probs=35.5

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|++++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytr_A            2 SSG-SSGTGE-----KPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSS-CCCSSC-----CTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSC
T ss_pred             CCC-cCCCCC-----cCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            366 667766     9999999999999999999999999886554443

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.4e-09  Score=66.16  Aligned_cols=43  Identities=19%  Similarity=0.393  Sum_probs=35.9

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emp_A            2 SSG-SSGTGV-----KPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCC-SCSSCC-----CSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCC
T ss_pred             Ccc-cccCCC-----cCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            466 677766     9999999999999999999999999887555443

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.4e-09  Score=65.10  Aligned_cols=41  Identities=17%  Similarity=0.270  Sum_probs=34.5

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      |+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|
T Consensus         3 H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            3 SG-SSGSGK-----KPYECKECRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CC-CSCCCS-----CSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CC-CCcCCC-----CCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            55 566665     999999999999999999999999988755544

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2e-09  Score=65.41  Aligned_cols=43  Identities=19%  Similarity=0.376  Sum_probs=35.6

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     +||.|++|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eme_A            2 SSG-SSGSGE-----KPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCC-CTTCCC-----CSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSC
T ss_pred             CCC-CCCCCC-----CCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            366 667766     9999999999999999999999999887554443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.81  E-value=1.7e-09  Score=65.74  Aligned_cols=42  Identities=17%  Similarity=0.356  Sum_probs=35.2

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A            2 SSG-SSGTGE-----KPFECAECGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCC-CCCCCC-----CSEECSSSSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCC-CCCCCC-----CCEECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            366 667766     999999999999999999999999988655444

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2e-09  Score=65.42  Aligned_cols=42  Identities=19%  Similarity=0.288  Sum_probs=35.3

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     ++|.|..|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep1_A            2 SSG-SSGTGE-----KPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCC-CCCSSC-----CSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSS
T ss_pred             ccc-cCCCCC-----CCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            466 667766     999999999999999999999999988755444

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.5e-09  Score=66.04  Aligned_cols=42  Identities=17%  Similarity=0.301  Sum_probs=35.0

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em5_A            2 SSG-SSGSST-----KSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCC-CCCCCS-----CSEECSSSCCEESSHHHHHHHHTTTSCSCCSSC
T ss_pred             CCc-CCCCCC-----CCeECCcCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            466 667766     999999999999999999999999887655444

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.3e-09  Score=66.28  Aligned_cols=42  Identities=17%  Similarity=0.313  Sum_probs=35.4

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoo_A            2 SSG-SSGSGE-----RPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP   43 (46)
T ss_dssp             CCC-CCCSCC-----CCEECSSSCCEESSHHHHHHHHHHHHSTTSSCC
T ss_pred             CCC-CCCCCC-----CCEEccccCcccCCHHHHHHHHHHHcCCCCCCC
Confidence            466 667766     999999999999999999999999988755444

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.5e-09  Score=65.93  Aligned_cols=43  Identities=19%  Similarity=0.335  Sum_probs=35.2

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq0_A            2 SSG-SSGTGE-----KPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS   44 (46)
T ss_dssp             CCC-CCTTCC-----CCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCS
T ss_pred             CCC-cCCCCC-----CCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            356 667665     9999999999999999999999998876554443

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.8e-09  Score=65.59  Aligned_cols=42  Identities=19%  Similarity=0.295  Sum_probs=34.9

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     ++|.|..|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enf_A            2 SSG-SSGTGE-----KPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCC-CCCCCC-----CSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCC
T ss_pred             CCC-cCCCCC-----cCeECCCCCcccCCHHHHHHHHHhhCCCCCCCC
Confidence            356 667666     999999999999999999999999988655444

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.6e-09  Score=65.84  Aligned_cols=42  Identities=17%  Similarity=0.330  Sum_probs=35.4

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|++++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A            2 SSG-SSGTGE-----KPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             CSC-CCCSSC-----CSEEETTTTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             Ccc-ccCCCC-----CCeECcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            466 667766     999999999999999999999999988755444

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.8e-09  Score=65.60  Aligned_cols=42  Identities=17%  Similarity=0.341  Sum_probs=35.3

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq2_A            2 SSG-SSGTGG-----KPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCC-CSSSSS-----CSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCC
T ss_pred             Ccc-cccCCC-----CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            466 667766     999999999999999999999999988655544

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2e-09  Score=65.41  Aligned_cols=43  Identities=19%  Similarity=0.346  Sum_probs=35.6

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytd_A            2 SSG-SSGSGE-----KPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS   44 (46)
T ss_dssp             CCC-CCSCCC-----CSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSS
T ss_pred             CCc-cccCCC-----cCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCC
Confidence            356 667666     9999999999999999999999999887555443

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2e-09  Score=65.40  Aligned_cols=42  Identities=19%  Similarity=0.328  Sum_probs=35.2

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A            2 SSG-SSGTGE-----KPYKCNECGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CCC-CCSCCC-----CCEECTTSCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             Ccc-CCCCCC-----CCeeccccCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            366 667666     999999999999999999999999988755544

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.2e-09  Score=65.26  Aligned_cols=42  Identities=19%  Similarity=0.309  Sum_probs=34.9

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      .|+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ene_A            2 SSG-SSGTGE-----KPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCC-SSCCCS-----SSEECSSSCCEESSHHHHHHHHTTTCCCCCCSC
T ss_pred             Ccc-cCCCCC-----CCeECCCCCchhCChHHHHHHHhhcCCCCCCCC
Confidence            366 667766     999999999999999999999999887655444

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.6e-09  Score=64.91  Aligned_cols=41  Identities=17%  Similarity=0.289  Sum_probs=34.2

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      |+ +.|.++     ++|.|.+|++.|.....|..|+++|++++++.|
T Consensus         3 H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytq_A            3 SG-SSGAGE-----KPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP   43 (46)
T ss_dssp             CS-SCSSCC-----CSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCC
T ss_pred             CC-cCcCCC-----CCcCCCccChhhCChHHHHHHHHHhCCCCCCCC
Confidence            55 566665     999999999999999999999999887655444

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.4e-09  Score=65.07  Aligned_cols=42  Identities=14%  Similarity=0.264  Sum_probs=34.8

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      |+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         3 h~-~~h~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2elz_A            3 SG-SSGSVE-----KPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS   44 (46)
T ss_dssp             CC-SCCCCC-----SSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSC
T ss_pred             CC-CCCCCC-----CCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            45 566665     9999999999999999999999999887555443

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.1e-09  Score=65.38  Aligned_cols=42  Identities=14%  Similarity=0.308  Sum_probs=35.2

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yth_A            2 SSG-SSGSGE-----KPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCC-SCCCCS-----SSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSC
T ss_pred             Ccc-cCCCCC-----cCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            466 667766     999999999999999999999999988655544

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.6e-09  Score=64.88  Aligned_cols=41  Identities=17%  Similarity=0.269  Sum_probs=34.7

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      |+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         3 H~-~~H~~~-----~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emi_A            3 SG-SSGTGE-----RHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP   43 (46)
T ss_dssp             CC-CSCSSC-----CCEECSSSCCEESSHHHHHHHHGGGCSCCCCSC
T ss_pred             CC-cccCCC-----CCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCC
Confidence            56 667766     999999999999999999999999988655444

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=1.7e-09  Score=65.77  Aligned_cols=42  Identities=14%  Similarity=0.131  Sum_probs=34.9

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en8_A            2 SSG-SSGSGE-----KSHTCDECGKNFCYISALRIHQRVHMGEKCSGP   43 (46)
T ss_dssp             CCC-CCCCCC-----SSEECTTTCCEESSHHHHHHHHTTTCCSCSSCC
T ss_pred             Ccc-ccCCCC-----CCeECCCcCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            366 667766     999999999999999999999999887655444

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2e-09  Score=65.47  Aligned_cols=43  Identities=19%  Similarity=0.334  Sum_probs=35.8

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en1_A            2 SSG-SSGSGE-----KPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CST-TCCCCC-----CSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCC
T ss_pred             Ccc-cCCCCC-----CCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            466 677766     9999999999999999999999999887555443

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=2.6e-09  Score=64.91  Aligned_cols=41  Identities=20%  Similarity=0.290  Sum_probs=34.9

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      |+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|
T Consensus         3 H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A            3 SG-SSGTGQ-----RPYECIECGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             SC-CCCCCS-----SSEECSSSCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             Cc-cccCCC-----cCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            55 667666     999999999999999999999999988755544

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.2e-09  Score=65.24  Aligned_cols=42  Identities=19%  Similarity=0.310  Sum_probs=34.8

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yti_A            2 SSG-SSGTGE-----KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCC-CCCSCC-----CTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSST
T ss_pred             CCC-cCCCCC-----cCeECCCCCcccCChhHHHHHhHhcCCCCCCCC
Confidence            356 667666     999999999999999999999999988655444

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.5e-09  Score=66.05  Aligned_cols=43  Identities=19%  Similarity=0.324  Sum_probs=35.7

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2yu8_A            2 SSG-SSGTGE-----KPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS   44 (46)
T ss_dssp             CCC-CCCCCC-----SSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSC
T ss_pred             CcC-cCCCCC-----CCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            356 667666     9999999999999999999999999887555443

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2.5e-09  Score=65.02  Aligned_cols=42  Identities=21%  Similarity=0.322  Sum_probs=34.7

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      |+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         3 H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em7_A            3 SG-SSGTGE-----KPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS   44 (46)
T ss_dssp             CC-CSSSCC-----CSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTT
T ss_pred             CC-CCCCCC-----cCccCCCccchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            55 566665     9999999999999999999999999887554443

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.1e-09  Score=65.36  Aligned_cols=42  Identities=19%  Similarity=0.335  Sum_probs=35.0

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq1_A            2 SSG-SSGTGE-----KPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCC-CCCCCS-----CCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSC
T ss_pred             Ccc-cccCCC-----CCeECCcCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            366 667666     999999999999999999999999987655444

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.5e-09  Score=65.02  Aligned_cols=42  Identities=21%  Similarity=0.374  Sum_probs=34.9

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em6_A            2 SSG-SSGMGE-----KCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCC-SCCCCC-----CCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCT
T ss_pred             CCc-cccCCC-----CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            356 667666     999999999999999999999999988655444

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=3.1e-09  Score=64.55  Aligned_cols=42  Identities=17%  Similarity=0.198  Sum_probs=35.0

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      |+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         3 H~-~~H~~~-----~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yso_A            3 SG-SSGSRE-----KSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPS   44 (46)
T ss_dssp             CS-CCSSCC-----CCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTT
T ss_pred             cc-cccCCC-----CCEEccccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            55 667666     9999999999999999999999999887555443

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.78  E-value=9.5e-10  Score=66.59  Aligned_cols=40  Identities=28%  Similarity=0.562  Sum_probs=29.0

Q ss_pred             hhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccC
Q psy16775        179 ANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCT  224 (306)
Q Consensus       179 ~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~  224 (306)
                      +|+++++|.|++|++.|...  |..|+ +.|.     ++++|.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~-----~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHV-RSHD-----GSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHH-HHHS-----CCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHH-HHcc-----CCCCCCCcCCC
Confidence            56777777777777777766  77777 5565     66677777775

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=3.3e-09  Score=64.42  Aligned_cols=42  Identities=21%  Similarity=0.287  Sum_probs=34.6

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      |+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         3 h~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2enc_A            3 SG-SSGSGE-----KPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS   44 (46)
T ss_dssp             CS-SCCCCC-----CSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSC
T ss_pred             CC-CCCCCC-----CCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCC
Confidence            45 566665     9999999999999999999999999887555443

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.78  E-value=2.9e-09  Score=63.27  Aligned_cols=40  Identities=15%  Similarity=0.241  Sum_probs=33.5

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRR   63 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~   63 (306)
                      |+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.
T Consensus         1 H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2el5_A            1 GS-SGSSGE-----NPYECSECGKAFNRKDQLISHQRTHAGESGPS   40 (42)
T ss_dssp             CC-SSSSSC-----CSEECSSSCCEESSHHHHHHHHGGGCCCCSCC
T ss_pred             CC-CCCCCC-----CCccCCCcChhhCCHHHHHHHHHhcCCCCCCC
Confidence            44 566665     99999999999999999999999998865443

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.6e-09  Score=64.92  Aligned_cols=42  Identities=21%  Similarity=0.346  Sum_probs=34.9

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      |+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         3 h~-~~h~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytm_A            3 SG-SSGTGE-----KPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS   44 (46)
T ss_dssp             SC-CCCSSC-----CSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred             CC-cCCCCC-----CCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            45 566665     9999999999999999999999999887555443

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.1e-09  Score=65.26  Aligned_cols=42  Identities=17%  Similarity=0.322  Sum_probs=35.0

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     ++|.|..|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yrj_A            2 SSG-SSGTGE-----KPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCC-CCCCCC-----CCEECSSSCCEESSHHHHHHHHTTTSSCCSSCS
T ss_pred             CCc-cCCCCC-----CCeECCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            366 667666     999999999999999999999999988655444

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.78  E-value=2.7e-09  Score=64.77  Aligned_cols=43  Identities=16%  Similarity=0.278  Sum_probs=35.6

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      .|+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em9_A            2 SSG-SSGTGE-----KPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CSC-CSCCCC-----CSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTT
T ss_pred             CCC-CCCCCC-----cCeECCccccccCChHHHHHHHHHhCCCCCCCCC
Confidence            366 667766     9999999999999999999999999887555443

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=3.2e-09  Score=64.49  Aligned_cols=41  Identities=17%  Similarity=0.330  Sum_probs=34.4

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      |+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         3 H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em2_A            3 SG-SSGSGE-----KPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP   43 (46)
T ss_dssp             CC-CSCCCC-----CSEECSSSCCEESSHHHHHHHHHHHCCCCSSCS
T ss_pred             CC-CCCCCC-----CCEECCcCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            55 566665     999999999999999999999999988755444

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.2e-09  Score=65.20  Aligned_cols=42  Identities=19%  Similarity=0.327  Sum_probs=35.1

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      |+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         3 h~-~~H~~~-----~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en6_A            3 SG-SSGSGE-----KPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CS-CCCCSS-----CCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSC
T ss_pred             CC-CccCCC-----cCeECCCCCcccCchHHHHHHHHHcCCCCCCCCC
Confidence            55 667666     9999999999999999999999999887555443

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=3.2e-09  Score=64.50  Aligned_cols=41  Identities=15%  Similarity=0.205  Sum_probs=34.4

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      |+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         3 H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A            3 SG-SSGTGE-----NPFICSECGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CC-CCCCSC-----CSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CC-CCCCCC-----CCEECCccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            55 666665     999999999999999999999999988655444

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=3e-09  Score=64.63  Aligned_cols=41  Identities=20%  Similarity=0.280  Sum_probs=34.7

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      |+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         3 h~-~~H~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en9_A            3 SG-SSGAGK-----KLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CC-SSCCSS-----CCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSC
T ss_pred             CC-CCCCCC-----CCEECCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            55 667666     999999999999999999999999988755544

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.5e-09  Score=64.97  Aligned_cols=42  Identities=14%  Similarity=0.306  Sum_probs=34.7

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     ++|.|..|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytf_A            2 SSG-SSGTGE-----KPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP   43 (46)
T ss_dssp             CCC-CSSCCC-----CSEECSSSCCEESSHHHHHHHHHTSCSSSSSCC
T ss_pred             CCC-CCCCCC-----CCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            356 667665     999999999999999999999999988654444

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.2e-09  Score=65.20  Aligned_cols=42  Identities=17%  Similarity=0.272  Sum_probs=35.0

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C   43 (46)
T 2yts_A            2 SSG-SSGTGE-----KPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCS-CCCCSC-----CSEECSSSCCEESSHHHHHHHGGGTSSCCSSCC
T ss_pred             CCC-CCCCCC-----cCEECCCCChhhCChHHHHHHHHhcCCCCCcCC
Confidence            366 667666     999999999999999999999999988655444

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.77  E-value=3e-09  Score=64.64  Aligned_cols=41  Identities=20%  Similarity=0.268  Sum_probs=34.3

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      |+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         3 h~-~~h~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2el6_A            3 SG-SSGAGV-----NPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP   43 (46)
T ss_dssp             SC-CSSCCC-----CSEECSSSSCEESSHHHHHHHHGGGCCSSCCSC
T ss_pred             CC-CCCCCC-----CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            45 566665     999999999999999999999999988755444

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3.4e-09  Score=64.42  Aligned_cols=40  Identities=20%  Similarity=0.416  Sum_probs=33.5

Q ss_pred             hhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         21 RDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        21 ~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         5 ~~h~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            5 SSGTGE-----KPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCS-----SSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCcCCC-----CCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556655     9999999999999999999999999887555443

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.8e-09  Score=64.83  Aligned_cols=41  Identities=22%  Similarity=0.382  Sum_probs=34.1

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      |+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|
T Consensus         3 h~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eon_A            3 SG-SSGTGE-----KPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP   43 (46)
T ss_dssp             CS-SSCSSC-----CSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTT
T ss_pred             CC-CCCCCC-----cccCCCCCCcccCcHHHHHHHHHhcCCCCCCCC
Confidence            45 566665     999999999999999999999999887655444

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3.8e-09  Score=62.70  Aligned_cols=38  Identities=16%  Similarity=0.256  Sum_probs=32.3

Q ss_pred             hhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCC
Q psy16775         21 RDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRR   63 (306)
Q Consensus        21 ~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~   63 (306)
                      +.|.++     +||.|.+|++.|.....|..|+++|.+++++.
T Consensus         3 ~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2yte_A            3 SGSSGE-----KPYSCAECKETFSDNNRLVQHQKMHTVKSGPS   40 (42)
T ss_dssp             SSSCSC-----CSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCC
T ss_pred             cCcCCC-----CCeECCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            556665     99999999999999999999999998764443

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.5e-09  Score=64.94  Aligned_cols=41  Identities=17%  Similarity=0.284  Sum_probs=34.2

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      |+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         3 H~-~~h~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ysp_A            3 SG-SSGTGE-----KPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP   43 (46)
T ss_dssp             CC-CCCSSC-----CSEEETTTTEEESCHHHHHHHHTTSCSCCSSCC
T ss_pred             CC-cCCCCC-----CCeECCCCCCccCCHHHHHHHHHhhCCCCCCCC
Confidence            55 566665     999999999999999999999999887655444

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.5e-09  Score=64.93  Aligned_cols=42  Identities=17%  Similarity=0.344  Sum_probs=35.2

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            2 SSG-SSGTGE-----KPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCC-CSSCCC-----CSSEETTTTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             Ccc-cCCCCC-----CCeECCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            366 667766     999999999999999999999999988755544

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.6e-09  Score=65.93  Aligned_cols=43  Identities=14%  Similarity=0.299  Sum_probs=35.6

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~H~-~~H~~~-----~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytg_A            2 SSG-SSGTGE-----KPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCC-CCCSSC-----CSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred             CCC-CCCCCC-----CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            466 667766     9999999999999999999999999887554443

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.76  E-value=1.1e-09  Score=67.26  Aligned_cols=41  Identities=17%  Similarity=0.459  Sum_probs=32.9

Q ss_pred             hhcCCCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCc
Q psy16775        179 ANKGKDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTA  225 (306)
Q Consensus       179 ~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~  225 (306)
                      .|.++++|.|++|++.|.+.  |.+|+ +.|.     ++++|.|++|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~-----~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHK-LSHS-----GEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHG-GGSC-----SCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHH-HhcC-----CCCCccCCCCCC
Confidence            45677888888888888876  88888 7776     777888888875

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.1e-09  Score=64.51  Aligned_cols=42  Identities=19%  Similarity=0.302  Sum_probs=35.4

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      .|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A            2 SSG-SSGTGE-----KPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             CSS-SSSSCC-----CSEECTTTCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             CCC-cCcCCC-----cCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            366 667766     999999999999999999999999988755544

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.4e-09  Score=63.65  Aligned_cols=41  Identities=12%  Similarity=0.210  Sum_probs=34.5

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRR   63 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~   63 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eof_A            2 SSG-SSGTGE-----KPYECNECQKAFNTKSNLMVHQRTHTGESGPS   42 (44)
T ss_dssp             CCS-SCCSCC-----CSEECTTTCCEESCHHHHHHHHHHTTTSSCSC
T ss_pred             CCc-cCCCCC-----CCeECCCCCcccCCHhHHHHHHHHhCCCCCCC
Confidence            466 667766     99999999999999999999999998765443

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.2e-09  Score=65.26  Aligned_cols=43  Identities=16%  Similarity=0.321  Sum_probs=35.7

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         2 ~h~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSG-SSGSGE-----RPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCC-SCSSCC-----CSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCC-cCCCCC-----CCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            356 667766     9999999999999999999999999887555443

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.8e-09  Score=63.49  Aligned_cols=41  Identities=12%  Similarity=0.179  Sum_probs=34.3

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRR   63 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~   63 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|++++++.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2yu5_A            2 SSG-SSGAGE-----NPFKCSKCDRVFTQRNYLVQHERTHARKSGPS   42 (44)
T ss_dssp             CCS-CCCSCC-----CSEECSSSSCEESSSHHHHHHHHHCCCCCSSC
T ss_pred             CCc-cccCCC-----CCeECCCCCchhCCHHHHHHHhHhcCCCCCCC
Confidence            366 667766     99999999999999999999999998764443

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3.6e-09  Score=64.27  Aligned_cols=42  Identities=14%  Similarity=0.204  Sum_probs=34.6

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      |+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|.
T Consensus         3 h~-~~h~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em8_A            3 SG-SSGSGE-----KPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS   44 (46)
T ss_dssp             CC-CCCCSC-----CSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSC
T ss_pred             CC-CCCCCC-----CCeECcccCchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            44 556655     9999999999999999999999999887555543

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.2e-09  Score=65.20  Aligned_cols=42  Identities=17%  Similarity=0.327  Sum_probs=35.2

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            2 SSG-SSGTGE-----KPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCC-CCSCCC-----CSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             ccc-cccCCC-----CCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            366 667766     999999999999999999999999988755444

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.8e-09  Score=63.46  Aligned_cols=40  Identities=15%  Similarity=0.213  Sum_probs=33.9

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRR   63 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~   63 (306)
                      |+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.
T Consensus         3 H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eoj_A            3 SG-SSGTGE-----NPYECCECGKVFSRKDQLVSHQKTHSGQSGPS   42 (44)
T ss_dssp             SC-CSSSSC-----CSCEETTTTEECSSHHHHHHHHTTSSSSCSCC
T ss_pred             Cc-cccCCC-----cCeeCCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            56 667766     99999999999999999999999988764443

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.5e-09  Score=63.56  Aligned_cols=41  Identities=12%  Similarity=0.129  Sum_probs=34.2

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRR   63 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~   63 (306)
                      +|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2en7_A            2 SSG-SSGTGM-----KPYVCNECGKAFRSKSYLIIHTRTHTGESGPS   42 (44)
T ss_dssp             CSC-CCSSSS-----SSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSC
T ss_pred             CCC-cCCCCC-----cCeECCCCCCccCCHHHHHHHhhhcCCCCCCC
Confidence            366 667766     99999999999999999999999988764443

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.72  E-value=5.6e-09  Score=61.96  Aligned_cols=38  Identities=18%  Similarity=0.315  Sum_probs=32.4

Q ss_pred             hhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCC
Q psy16775         21 RDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRR   63 (306)
Q Consensus        21 ~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~   63 (306)
                      +.|.++     +||.|.+|++.|.....|..|+++|.+++++.
T Consensus         4 ~~H~~~-----~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~   41 (42)
T 2epc_A            4 GSSGGE-----TPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS   41 (42)
T ss_dssp             SCCCSS-----CCEECSSSCCEESSHHHHHHHHHHTTCCCCCC
T ss_pred             ccCCCC-----CCeECCCCCcccCCHHHHHHHhhhcCCCCCCC
Confidence            556655     99999999999999999999999998865443

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=5.8e-09  Score=63.58  Aligned_cols=41  Identities=17%  Similarity=0.244  Sum_probs=33.8

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHH-hcCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVY-SAHSVAPRRP   64 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~-~hh~~~~~~~   64 (306)
                      |+ +.|.++     +||.|.+|++.|.....|..|++ +|.+++++.|
T Consensus         3 H~-~~H~~~-----k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C   44 (47)
T 2epx_A            3 SG-SSGTGK-----KPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP   44 (47)
T ss_dssp             CC-CCCCCC-----CSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSC
T ss_pred             cc-cccCCC-----CCEECCccCchhCChHHHHHHhHhhcCCCCCCCC
Confidence            55 667666     99999999999999999999999 8877644443

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.5e-09  Score=63.53  Aligned_cols=39  Identities=15%  Similarity=0.324  Sum_probs=33.4

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPR   62 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~   62 (306)
                      |+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++
T Consensus         2 H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2ytb_A            2 SS-GSSGGE-----KPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS   40 (42)
T ss_dssp             CC-CCCCSC-----CSBCCTTTTCCBSSHHHHHTTGGGTSCCSCC
T ss_pred             Cc-cccCCC-----CCeeCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            55 567666     9999999999999999999999999886544

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=4.2e-09  Score=62.60  Aligned_cols=39  Identities=15%  Similarity=0.400  Sum_probs=32.8

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPR   62 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~   62 (306)
                      |+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++
T Consensus         2 H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2eos_A            2 SS-GSSGGE-----KPYPCEICGTRFRHLQTLKSHLRIHTGSGPS   40 (42)
T ss_dssp             CC-SCCSSS-----CCBCCSSSCCCBSSHHHHHHHTTTTSCCSST
T ss_pred             CC-cccCCC-----CCEECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            44 566665     9999999999999999999999998876444

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=4.6e-09  Score=63.10  Aligned_cols=42  Identities=17%  Similarity=0.350  Sum_probs=34.8

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      .|+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSG-SSGHTR-----KRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCC-SCCCCC-----SSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             Ccc-cccCCC-----CCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            366 667766     999999999999999999999999988654433

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=7.4e-09  Score=62.85  Aligned_cols=41  Identities=17%  Similarity=0.280  Sum_probs=33.9

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCC-CCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHS-VAPRRP   64 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~-~~~~~~   64 (306)
                      |+ +.|.++     +||.|.+|++.|.....|..|+++|.+ ++++.|
T Consensus         3 H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            3 SG-SSGQKE-----KCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CC-CCCCCS-----CCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             Cc-cccCCC-----CCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            55 667665     999999999999999999999999887 644433

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=4.3e-09  Score=62.53  Aligned_cols=39  Identities=23%  Similarity=0.399  Sum_probs=33.0

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPR   62 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~   62 (306)
                      |+ +.|.++     +||.|..|++.|.....|..|+++|.+++++
T Consensus         2 H~-~~H~~~-----k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2en2_A            2 SS-GSSGGE-----KPYKCETCGARFVQVAHLRAHVLIHTGSGPS   40 (42)
T ss_dssp             CC-CCCCSS-----CSEECTTTCCEESSHHHHHHHTHHHHSCCSS
T ss_pred             CC-cccCCC-----CCEeCCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            44 556655     9999999999999999999999999886544

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1e-08  Score=61.54  Aligned_cols=41  Identities=10%  Similarity=0.084  Sum_probs=33.7

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      |+ +.|.++     ++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         3 h~-~~h~~~-----~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SG-SSGAAK-----TTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CS-CSCSSS-----CCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CC-CCCCCC-----cCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            44 556655     999999999999999999999999988655443

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=9.1e-09  Score=61.81  Aligned_cols=39  Identities=15%  Similarity=0.175  Sum_probs=33.6

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPR   62 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~   62 (306)
                      |+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++
T Consensus         3 H~-~~H~~~-----k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (44)
T 2epv_A            3 SG-SSGSGE-----KPYECNECGKAFIWKSLLIVHERTHAGVSGP   41 (44)
T ss_dssp             CC-CCCCCC-----CSEECSSSCCEESSHHHHHHHHGGGSSCSCC
T ss_pred             CC-cccCCC-----cCeECCCCCcccCchHHHHHHHhHhcCCCCC
Confidence            55 667666     9999999999999999999999999886544

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=4.3e-09  Score=63.24  Aligned_cols=41  Identities=17%  Similarity=0.206  Sum_probs=34.4

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCCCCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRR   63 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~   63 (306)
                      +|+ +.|.++     +||.|.+|++.|.....|..|+++|.+++++.
T Consensus         2 ~H~-~~H~~~-----~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eox_A            2 SSG-SSGTDS-----KSYNCNECGKAFTRIFHLTRHQKIHTRKSGPS   42 (44)
T ss_dssp             CCC-CCCCCC-----CCEEETTTTEEESSSHHHHTTHHHHCCCCCCS
T ss_pred             CCC-cCCCCC-----CCeECcccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            356 667666     99999999999999999999999998865443

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=9.6e-10  Score=74.62  Aligned_cols=57  Identities=12%  Similarity=0.099  Sum_probs=50.0

Q ss_pred             hhcCCCCcCCCcchhhhHHH-HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        179 ANKGKDGGRCPVCGRVYQWK-LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       179 ~h~~~~~~~C~~C~~~f~~~-l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      ++.+++++.|+.|++.|... |..|+ . |.     ++++|.|+.|++.|. +..|..|++++.+.
T Consensus        11 ~~c~~r~~~C~~C~~~~~~~~L~~H~-~-~c-----~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A           11 TECPLRLAVCQHCDLELSILKLKEHE-D-YC-----GARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCCCCCEECSSSCCEECHHHHHHHH-H-HH-----HHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             ccCCCcccCCcccChHhhHHHHHHHH-h-Hc-----CCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            67899999999999999877 99998 4 55     888999999999987 59999999986554

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.64  E-value=1.8e-08  Score=58.68  Aligned_cols=36  Identities=17%  Similarity=0.329  Sum_probs=33.3

Q ss_pred             CCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCC
Q psy16775        140 YNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRC  188 (306)
Q Consensus       140 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C  188 (306)
                      +++++|.|++|++.|.+.+.|..|++             +|+++++|.+
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMN-------------VHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHH-------------TTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHH-------------HcCCCcccee
Confidence            48899999999999999999999999             7888999876

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=2.9e-08  Score=60.19  Aligned_cols=35  Identities=20%  Similarity=0.323  Sum_probs=30.4

Q ss_pred             CCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         30 AHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        30 ~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      ++++|.|.+|++.|.....|..|+++|++++++.|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eom_A            9 GERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCC
Confidence            34999999999999999999999999988755544

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.62  E-value=1.8e-09  Score=68.15  Aligned_cols=41  Identities=17%  Similarity=0.299  Sum_probs=27.2

Q ss_pred             HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhhcCCCC
Q psy16775        199 LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAP  245 (306)
Q Consensus       199 l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~~  245 (306)
                      |..|+ ..|.     ++++|.|.+||+.|.+...|.+|+++|+++.+
T Consensus        12 l~~h~-~~H~-----~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   52 (54)
T 1yui_A           12 TEKPR-SRSQ-----SEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             CCCCH-HHHT-----SSCCEECTTTCCEESSHHHHHHHHHHHTTTSC
T ss_pred             hhhHH-HhcC-----CCCCccCCCCCcccCCHHHHHHHHHHhccCCC
Confidence            44555 4554     56667777777777777777777777766543

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.6e-08  Score=61.35  Aligned_cols=34  Identities=26%  Similarity=0.494  Sum_probs=29.8

Q ss_pred             CcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         31 HLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        31 ~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep0_A           10 EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSC
T ss_pred             CCCeeCcccCcccCChHHHHHHHHHhCCCCCCCC
Confidence            3999999999999999999999999988655444

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.61  E-value=3.6e-08  Score=58.83  Aligned_cols=34  Identities=18%  Similarity=0.374  Sum_probs=29.8

Q ss_pred             CcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         31 HLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        31 ~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +++|.|..|++.|.....|..|+++|++++++.|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            8 NGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             CCCEECCCCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            4999999999999999999999999988654443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.9e-08  Score=56.96  Aligned_cols=29  Identities=17%  Similarity=0.327  Sum_probs=27.1

Q ss_pred             cccCCCCCccccccccccCChHHHHhHhh
Q psy16775        137 KMIYNRPPLNCQKCQFRFFTDQGLERHLL  165 (306)
Q Consensus       137 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  165 (306)
                      ++|+++++|.|++|++.|.+...|..|++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~   30 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIK   30 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHH
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHH
Confidence            45679999999999999999999999999

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.59  E-value=3.9e-08  Score=56.42  Aligned_cols=33  Identities=18%  Similarity=0.306  Sum_probs=30.1

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhc
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGS  167 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  167 (306)
                      |+++|+++++|.|++|++.|.+...|..|++.|
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   34 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHh
Confidence            667788999999999999999999999999944

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=2e-08  Score=60.88  Aligned_cols=35  Identities=20%  Similarity=0.483  Sum_probs=30.4

Q ss_pred             CcccccCcccccccCcHHHHHHHHhcCCCCCCCCC
Q psy16775         31 HLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRPA   65 (306)
Q Consensus        31 ~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~~   65 (306)
                      +++|.|.+|++.|.....|..|+++|++++++.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytt_A           10 EKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS   44 (46)
T ss_dssp             CCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCC
T ss_pred             CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            39999999999999999999999999887555443

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=2.6e-08  Score=58.69  Aligned_cols=33  Identities=18%  Similarity=0.368  Sum_probs=29.1

Q ss_pred             CCcccccCcccccccCcHHHHHHHHhcCCCCCC
Q psy16775         30 AHLSYKCTVCTATFGMYRQFENHVYSAHSVAPR   62 (306)
Q Consensus        30 ~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~   62 (306)
                      +++||.|.+|++.|.....|..|+++|++++++
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   39 (41)
T 2ept_A            7 GQRVYECQECGKSFRQKGSLTLHERIHTGSGPS   39 (41)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHGGGCCCCSCS
T ss_pred             CCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCc
Confidence            349999999999999999999999999876444

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.56  E-value=4.9e-08  Score=63.67  Aligned_cols=39  Identities=21%  Similarity=0.231  Sum_probs=33.9

Q ss_pred             CCCCCccccc--cccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        140 YNRPPLNCQK--CQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       140 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      ++++||+|+.  |+++|...+.|.+|++.            +|++++||.|..
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rr------------iHTgEKP~~~~~   63 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQA------------VHKSDLPAFSAE   63 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHH------------HSSSCCCCCCCS
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhh------------hCCCCCCccccc
Confidence            4899999975  99999999999999842            789999999853

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=4e-08  Score=59.17  Aligned_cols=35  Identities=14%  Similarity=0.288  Sum_probs=29.9

Q ss_pred             CCcccccCcccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         30 AHLSYKCTVCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        30 ~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      ++++|.|.+|++.|.....|..|+++|.+++++.|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            9 GQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             SCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            33999999999999999999999999887654443

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=7.6e-09  Score=70.11  Aligned_cols=61  Identities=23%  Similarity=0.276  Sum_probs=52.3

Q ss_pred             ccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH-HHHHHHhhcC
Q psy16775        132 VKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK-LLNHVARDHN  208 (306)
Q Consensus       132 ~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~-l~~H~~~~H~  208 (306)
                      +..|++.+.+.+++.|+.|++.| ....|..|+ .             |.+++++.|+.|++.|... |..|+ ..|.
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~-------------~c~~~~~~C~~C~~~~~~~~l~~H~-~~c~   66 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-D-------------YCGARTELCGNCGRNVLVKDLKTHP-EVCG   66 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-H-------------HHHHCEEECSSSCCEEETTGGGTHH-HHBT
T ss_pred             HHhhCcccCCCcccCCcccChHh-hHHHHHHHH-h-------------HcCCCceEcccCCCcCcHHHHHHHH-HHcc
Confidence            34677777899999999999999 499999998 3             3678999999999998877 99999 6675

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.51  E-value=7.6e-08  Score=54.33  Aligned_cols=31  Identities=23%  Similarity=0.515  Sum_probs=28.0

Q ss_pred             CCcceecCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        214 AHLSYKCTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      ++++|.|.+|++.|.+...|.+|++.|+++.
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            4 GSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            7789999999999999999999999987653

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.51  E-value=4.7e-08  Score=56.06  Aligned_cols=35  Identities=14%  Similarity=0.257  Sum_probs=30.7

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHS   58 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~   58 (306)
                      |+ +.|.++     +||.|+.|++.|.....|..|+++|.+
T Consensus         2 H~-~~h~~~-----k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 ST-RGSTGI-----KPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CS-STTCCS-----SSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CC-CcCCCC-----CCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            45 567666     999999999999999999999999875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=1e-07  Score=55.18  Aligned_cols=30  Identities=13%  Similarity=0.298  Sum_probs=27.6

Q ss_pred             CCcceecCc--cCcccCCHHHHHhhHhhhcCC
Q psy16775        214 AHLSYKCTV--CTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       214 ~~k~~~C~~--C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      +++||+|+.  |++.|.+++.|.+|+++|.++
T Consensus         6 gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            6 SGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            788999986  999999999999999998764

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=4.8e-08  Score=56.03  Aligned_cols=30  Identities=30%  Similarity=0.618  Sum_probs=27.7

Q ss_pred             CcccccCcccccccCcHHHHHHHHhcCCCC
Q psy16775         31 HLSYKCTVCTATFGMYRQFENHVYSAHSVA   60 (306)
Q Consensus        31 ~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~   60 (306)
                      ++||.|..|++.|.....|..|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            7 GRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            399999999999999999999999998763

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.50  E-value=9.8e-08  Score=53.92  Aligned_cols=31  Identities=13%  Similarity=0.374  Sum_probs=27.9

Q ss_pred             CCcceecCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        214 AHLSYKCTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      ++++|.|++|++.|.+...|.+|++.|+++.
T Consensus         4 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            4 GKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            7789999999999999999999999987653

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.49  E-value=9.2e-08  Score=54.03  Aligned_cols=28  Identities=29%  Similarity=0.466  Sum_probs=26.0

Q ss_pred             cCCCCCccccccccccCChHHHHhHhhh
Q psy16775        139 IYNRPPLNCQKCQFRFFTDQGLERHLLG  166 (306)
Q Consensus       139 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~  166 (306)
                      |+++++|.|++|++.|.+...|..|++.
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~   29 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKV   29 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHH
Confidence            4589999999999999999999999993

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.49  E-value=9e-08  Score=53.99  Aligned_cols=28  Identities=18%  Similarity=0.332  Sum_probs=25.9

Q ss_pred             cCCCCCccccccccccCChHHHHhHhhh
Q psy16775        139 IYNRPPLNCQKCQFRFFTDQGLERHLLG  166 (306)
Q Consensus       139 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~  166 (306)
                      |+++++|.|++|++.|.+...|..|++.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~   29 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIRE   29 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHH
Confidence            4589999999999999999999999993

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.46  E-value=1.1e-07  Score=53.07  Aligned_cols=33  Identities=21%  Similarity=0.422  Sum_probs=29.9

Q ss_pred             CCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCC
Q psy16775        143 PPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRC  188 (306)
Q Consensus       143 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C  188 (306)
                      +||.|++|++.|...+.|..|++             +|+++++|.+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~-------------~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHIT-------------LHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHH-------------HHTTTCCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHH-------------HhCCCCCCCC
Confidence            48999999999999999999999             7888988863

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.44  E-value=1.4e-07  Score=54.79  Aligned_cols=33  Identities=21%  Similarity=0.432  Sum_probs=29.1

Q ss_pred             CCcccccCcccccccCcHHHHHHHHhcCCCCCC
Q psy16775         30 AHLSYKCTVCTATFGMYRQFENHVYSAHSVAPR   62 (306)
Q Consensus        30 ~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~   62 (306)
                      +++||.|.+|++.|.....|..|+++|.+++++
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   35 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRAR   35 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCccc
Confidence            348999999999999999999999999876443

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.44  E-value=1.5e-07  Score=52.55  Aligned_cols=31  Identities=13%  Similarity=0.368  Sum_probs=28.1

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCCCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSVAPR   62 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~~   62 (306)
                      +||.|.+|++.|.....|..|+++|.+++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            4899999999999999999999999887554

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.44  E-value=2.7e-08  Score=69.54  Aligned_cols=45  Identities=13%  Similarity=0.186  Sum_probs=37.0

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcch
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCG  192 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~  192 (306)
                      +.++|+++++|.|++|++.|.+...|..|++             +|+++++|.|..|.
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~-------------~Ht~ekp~~C~~~~   60 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLN-------------IHNEEFQKRAKRQE   60 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHH-------------HHHHHHHHHCCCCS
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHH-------------HhCCCCCcccchhh
Confidence            3456679999999999999999999999998             66667777776654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.42  E-value=3.3e-07  Score=59.78  Aligned_cols=39  Identities=23%  Similarity=0.328  Sum_probs=31.5

Q ss_pred             CCCCcccccCc--ccccccCcHHHHHHH-HhcCCCCCCCCCC
Q psy16775         28 KPAHLSYKCTV--CTATFGMYRQFENHV-YSAHSVAPRRPAT   66 (306)
Q Consensus        28 ~~~~~~y~C~~--C~~~f~~~~~L~~H~-~~hh~~~~~~~~~   66 (306)
                      .+++|||+|.+  |++.|....+|..|+ ++|.+++|+.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            34669999975  999999999999998 5788876655543

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=1.1e-07  Score=57.98  Aligned_cols=39  Identities=23%  Similarity=0.385  Sum_probs=32.2

Q ss_pred             hhcCCCCCCCCcccccC--cccccccCcHHHHHHHHhcCCCCCCCC
Q psy16775         21 RDHNMSLKPAHLSYKCT--VCTATFGMYRQFENHVYSAHSVAPRRP   64 (306)
Q Consensus        21 ~~H~~~~~~~~~~y~C~--~C~~~f~~~~~L~~H~~~hh~~~~~~~   64 (306)
                      +.|.++     ++|.|.  .|++.|.....|..|+++|.+++++.|
T Consensus         5 ~~H~~~-----k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C   45 (48)
T 2ent_A            5 SSGTGE-----KPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP   45 (48)
T ss_dssp             CSSCCC-----CCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSS
T ss_pred             CCcCCC-----CCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            445554     999998  899999999999999999887655444

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=1.5e-07  Score=53.95  Aligned_cols=31  Identities=19%  Similarity=0.366  Sum_probs=27.5

Q ss_pred             cccCCCCCccccccccccCChHHHHhH-hhhc
Q psy16775        137 KMIYNRPPLNCQKCQFRFFTDQGLERH-LLGS  167 (306)
Q Consensus       137 ~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~~  167 (306)
                      ++|++++||.|+.|++.|.....|..| ++.|
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H   33 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKH   33 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHT
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHc
Confidence            456799999999999999999999999 7733

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=2.6e-07  Score=52.47  Aligned_cols=30  Identities=17%  Similarity=0.397  Sum_probs=27.1

Q ss_pred             ccCCCCCccccccccccCChHHHHhHhhhc
Q psy16775        138 MIYNRPPLNCQKCQFRFFTDQGLERHLLGS  167 (306)
Q Consensus       138 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  167 (306)
                      +|+++++|+|++|++.|.+...|..|++.|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRH   32 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHS
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHh
Confidence            456999999999999999999999999943

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=2.7e-07  Score=52.40  Aligned_cols=29  Identities=21%  Similarity=0.382  Sum_probs=26.6

Q ss_pred             ccCCCCCccccccccccCChHHHHhHhhh
Q psy16775        138 MIYNRPPLNCQKCQFRFFTDQGLERHLLG  166 (306)
Q Consensus       138 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  166 (306)
                      .|.++++|.|++|++.|.....|..|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLV   31 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHH
Confidence            45689999999999999999999999993

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=3e-07  Score=52.14  Aligned_cols=30  Identities=17%  Similarity=0.367  Sum_probs=27.2

Q ss_pred             CCcceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        214 AHLSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      ++++|.|.+|++.|.+...|.+|+++|.++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            6 SGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            778999999999999999999999988654

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=3.1e-07  Score=52.18  Aligned_cols=31  Identities=19%  Similarity=0.412  Sum_probs=27.5

Q ss_pred             CCCcccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         29 PAHLSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        29 ~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      .+++||.|.+|++.|.....|..|+++|.++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            5 SSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            3459999999999999999999999998764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=2.8e-07  Score=52.36  Aligned_cols=30  Identities=13%  Similarity=0.359  Sum_probs=27.1

Q ss_pred             CCcceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        214 AHLSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      ++++|+|.+|++.|.+...|.+|+++|+++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            6 SGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            788999999999999999999999987654

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=3.3e-07  Score=52.98  Aligned_cols=29  Identities=21%  Similarity=0.269  Sum_probs=26.0

Q ss_pred             cCCCCCccccc--cccccCChHHHHhHhhhc
Q psy16775        139 IYNRPPLNCQK--CQFRFFTDQGLERHLLGS  167 (306)
Q Consensus       139 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~  167 (306)
                      +++++||+|+.  |+++|.+++.|..|+++|
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~H   34 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVH   34 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            45899999986  999999999999999933

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=2.1e-07  Score=53.26  Aligned_cols=30  Identities=23%  Similarity=0.581  Sum_probs=27.1

Q ss_pred             cccCCCCCccccccccccCCh-HHHHhHhhh
Q psy16775        137 KMIYNRPPLNCQKCQFRFFTD-QGLERHLLG  166 (306)
Q Consensus       137 ~~~~~~~~~~C~~C~~~f~~~-~~l~~H~~~  166 (306)
                      ++|+++++|.|++|++.|.+. ..|..|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~   32 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWA   32 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHH
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHh
Confidence            356699999999999999999 999999993

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=4.9e-07  Score=51.22  Aligned_cols=31  Identities=13%  Similarity=0.251  Sum_probs=27.9

Q ss_pred             CCCcccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         29 PAHLSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        29 ~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      .++++|.|.+|++.|.....|..|+++|.++
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            5 SSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            3449999999999999999999999998764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=3.5e-07  Score=51.88  Aligned_cols=29  Identities=21%  Similarity=0.386  Sum_probs=26.6

Q ss_pred             ccCCCCCccccccccccCChHHHHhHhhh
Q psy16775        138 MIYNRPPLNCQKCQFRFFTDQGLERHLLG  166 (306)
Q Consensus       138 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  166 (306)
                      +|.++++|.|++|++.|.....|..|++.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRK   31 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHH
Confidence            45689999999999999999999999993

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.32  E-value=3.1e-07  Score=52.84  Aligned_cols=35  Identities=20%  Similarity=0.266  Sum_probs=31.1

Q ss_pred             CCCCCcccc--ccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcC
Q psy16775        140 YNRPPLNCQ--KCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGR  187 (306)
Q Consensus       140 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~  187 (306)
                      +++++|.|+  .|++.|.+.+.|..|++             +|+++++|.
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~-------------~H~~~k~~~   38 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKH-------------KHEMTLKFG   38 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHH-------------HHHTTTTTC
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHH-------------HhCCCCCCC
Confidence            488999999  59999999999999999             777888763

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.32  E-value=2.9e-07  Score=56.30  Aligned_cols=31  Identities=16%  Similarity=0.326  Sum_probs=26.8

Q ss_pred             CCcceecCccCcccCCHHHHHhhHh-hhcCCC
Q psy16775        214 AHLSYKCTVCTATFGMYRQFENHVY-SAHSVA  244 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~~~~~L~~H~~-~hh~~~  244 (306)
                      ++++|.|.+|++.|.+...|.+|++ +|.++.
T Consensus         4 ~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            4 RDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             TTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            7889999999999999999999999 766543

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=2.6e-07  Score=52.94  Aligned_cols=28  Identities=14%  Similarity=0.253  Sum_probs=25.6

Q ss_pred             CcccccCcccccccCcHHHHHH-HHhcCC
Q psy16775         31 HLSYKCTVCTATFGMYRQFENH-VYSAHS   58 (306)
Q Consensus        31 ~~~y~C~~C~~~f~~~~~L~~H-~~~hh~   58 (306)
                      ++||+|..|++.|..+..|..| ++.|.+
T Consensus         7 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            7 GHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            3999999999999999999999 888765

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.30  E-value=3.6e-07  Score=48.54  Aligned_cols=27  Identities=30%  Similarity=0.607  Sum_probs=24.4

Q ss_pred             CcceecCccCcccCCHHHHHhhHhhhc
Q psy16775        215 HLSYKCTVCTATFGMYRQFENHVYSAH  241 (306)
Q Consensus       215 ~k~~~C~~C~~~f~~~~~L~~H~~~hh  241 (306)
                      +++|.|+.|++.|.+...|..|++.|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            357999999999999999999998865

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=5.2e-07  Score=51.13  Aligned_cols=29  Identities=21%  Similarity=0.228  Sum_probs=26.4

Q ss_pred             ccCCCCCccccccccccCChHHHHhHhhh
Q psy16775        138 MIYNRPPLNCQKCQFRFFTDQGLERHLLG  166 (306)
Q Consensus       138 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  166 (306)
                      +|.++++|.|++|++.|.+...|..|+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLL   31 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHH
Confidence            45689999999999999999999999993

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.29  E-value=3.9e-07  Score=48.03  Aligned_cols=26  Identities=12%  Similarity=0.473  Sum_probs=23.8

Q ss_pred             CcceecCccCcccCCHHHHHhhHhhh
Q psy16775        215 HLSYKCTVCTATFGMYRQFENHVYSA  240 (306)
Q Consensus       215 ~k~~~C~~C~~~f~~~~~L~~H~~~h  240 (306)
                      +++|.|+.||+.|.+...|..|++.|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            35899999999999999999999886

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.29  E-value=3e-07  Score=48.61  Aligned_cols=26  Identities=19%  Similarity=0.502  Sum_probs=23.7

Q ss_pred             CcceecCccCcccCCHHHHHhhHhhh
Q psy16775        215 HLSYKCTVCTATFGMYRQFENHVYSA  240 (306)
Q Consensus       215 ~k~~~C~~C~~~f~~~~~L~~H~~~h  240 (306)
                      ++||.|+.||+.|.+...|.+|++.|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            35899999999999999999999875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.28  E-value=2e-06  Score=56.21  Aligned_cols=31  Identities=13%  Similarity=0.219  Sum_probs=28.7

Q ss_pred             CCcceecCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        214 AHLSYKCTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      +++||+|..|++.|.+...|.+|+++|++..
T Consensus        10 ~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           10 EAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            7889999999999999999999999988754

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=6.5e-07  Score=50.75  Aligned_cols=30  Identities=13%  Similarity=0.386  Sum_probs=27.1

Q ss_pred             CCcceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        214 AHLSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      ++++|.|+.|++.|.+...|..|+++|.++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            6 SGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            678999999999999999999999998754

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=4.1e-07  Score=51.97  Aligned_cols=30  Identities=20%  Similarity=0.473  Sum_probs=27.1

Q ss_pred             CCcccccCcccccccCc-HHHHHHHHhcCCC
Q psy16775         30 AHLSYKCTVCTATFGMY-RQFENHVYSAHSV   59 (306)
Q Consensus        30 ~~~~y~C~~C~~~f~~~-~~L~~H~~~hh~~   59 (306)
                      +++||.|..|++.|... ..|..|+++|.++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            6 SGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            34999999999999999 9999999998764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.26  E-value=6.4e-07  Score=48.20  Aligned_cols=29  Identities=17%  Similarity=0.336  Sum_probs=25.7

Q ss_pred             CcceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        215 HLSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       215 ~k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      +++|.|..|++.|.+...|..|++.|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            35799999999999999999999987654

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=7.5e-07  Score=50.50  Aligned_cols=29  Identities=21%  Similarity=0.248  Sum_probs=26.3

Q ss_pred             ccCCCCCccccccccccCChHHHHhHhhh
Q psy16775        138 MIYNRPPLNCQKCQFRFFTDQGLERHLLG  166 (306)
Q Consensus       138 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  166 (306)
                      .+.++++|.|++|++.|.....|..|+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRI   31 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHH
Confidence            34588999999999999999999999993

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.21  E-value=9.2e-07  Score=47.20  Aligned_cols=28  Identities=29%  Similarity=0.532  Sum_probs=25.0

Q ss_pred             cceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      ++|.|++|++.|.+...|..|++.|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            3699999999999999999999998654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.21  E-value=5.5e-07  Score=51.27  Aligned_cols=25  Identities=20%  Similarity=0.397  Sum_probs=23.3

Q ss_pred             CCcceecCccCcccCCHHHHHhhHh
Q psy16775        214 AHLSYKCTVCTATFGMYRQFENHVY  238 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~~~~~L~~H~~  238 (306)
                      |++||.|+.||++|.++++|.+|+.
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~p   29 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHHH
T ss_pred             CccCeECCCCCCccCCHhHccCcCC
Confidence            7889999999999999999999983

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.21  E-value=7.3e-07  Score=46.93  Aligned_cols=26  Identities=12%  Similarity=0.450  Sum_probs=24.3

Q ss_pred             cccccCcccccccCcHHHHHHHHhcC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAH   57 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh   57 (306)
                      +||.|..|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            79999999999999999999999863

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.21  E-value=7.5e-07  Score=47.62  Aligned_cols=28  Identities=14%  Similarity=0.370  Sum_probs=25.2

Q ss_pred             cceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      +||.|+.|++.|.+...|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            4799999999999999999999998654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.21  E-value=3.1e-06  Score=55.30  Aligned_cols=32  Identities=13%  Similarity=0.203  Sum_probs=28.8

Q ss_pred             CCCcccccCcccccccCcHHHHHHHHhcCCCC
Q psy16775         29 PAHLSYKCTVCTATFGMYRQFENHVYSAHSVA   60 (306)
Q Consensus        29 ~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~   60 (306)
                      .+++||+|.+|++.|.....|..|+++|+++.
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            34599999999999999999999999998863

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.20  E-value=9e-07  Score=47.59  Aligned_cols=28  Identities=18%  Similarity=0.363  Sum_probs=26.1

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            7999999999999999999999998764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.20  E-value=1.1e-06  Score=47.26  Aligned_cols=28  Identities=21%  Similarity=0.472  Sum_probs=26.1

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccC
Confidence            4799999999999999999999999875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.19  E-value=9.2e-07  Score=47.55  Aligned_cols=29  Identities=21%  Similarity=0.456  Sum_probs=25.9

Q ss_pred             cceecCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      ++|.|..|++.|.+...|..|++.|+++.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            36999999999999999999999987653

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.19  E-value=7.2e-07  Score=47.32  Aligned_cols=27  Identities=30%  Similarity=0.628  Sum_probs=24.9

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHS   58 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~   58 (306)
                      +||.|..|++.|.....|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            799999999999999999999988753

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.19  E-value=7.4e-07  Score=54.40  Aligned_cols=30  Identities=17%  Similarity=0.337  Sum_probs=26.6

Q ss_pred             CCcccccCcccccccCcHHHHHHHH-hcCCC
Q psy16775         30 AHLSYKCTVCTATFGMYRQFENHVY-SAHSV   59 (306)
Q Consensus        30 ~~~~y~C~~C~~~f~~~~~L~~H~~-~hh~~   59 (306)
                      +++||.|.+|++.|.....|..|++ +|.++
T Consensus         4 ~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            4 RDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             TTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            3499999999999999999999999 87765

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.18  E-value=5.9e-07  Score=47.40  Aligned_cols=25  Identities=20%  Similarity=0.533  Sum_probs=23.8

Q ss_pred             cccccCcccccccCcHHHHHHHHhc
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSA   56 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~h   56 (306)
                      +||.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            7999999999999999999999876

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.18  E-value=9.9e-07  Score=46.28  Aligned_cols=26  Identities=23%  Similarity=0.516  Sum_probs=23.2

Q ss_pred             ceecCccCcccCCHHHHHhhHhhhcC
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~hh~  242 (306)
                      ||.|..|++.|.+...|.+|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            48999999999999999999998764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.18  E-value=1.2e-06  Score=46.67  Aligned_cols=28  Identities=29%  Similarity=0.532  Sum_probs=25.8

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4799999999999999999999998764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.17  E-value=9.4e-07  Score=47.22  Aligned_cols=28  Identities=14%  Similarity=0.370  Sum_probs=25.8

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      +||.|..|++.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            4899999999999999999999998764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.16  E-value=1.1e-06  Score=50.07  Aligned_cols=26  Identities=23%  Similarity=0.432  Sum_probs=23.8

Q ss_pred             CCCCCccccccccccCChHHHHhHhh
Q psy16775        140 YNRPPLNCQKCQFRFFTDQGLERHLL  165 (306)
Q Consensus       140 ~~~~~~~C~~C~~~f~~~~~l~~H~~  165 (306)
                      .+++||.|+.|+++|.+++.|..|+.
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~p   29 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcCC
Confidence            48999999999999999999999974

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.16  E-value=1.5e-07  Score=52.15  Aligned_cols=31  Identities=19%  Similarity=0.328  Sum_probs=28.2

Q ss_pred             CCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCc
Q psy16775        143 PPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGG  186 (306)
Q Consensus       143 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~  186 (306)
                      +||.|++|++.|...+.|..|++             +|+++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~-------------~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIK-------------TAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTT-------------SSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHH-------------HHccCCCC
Confidence            48999999999999999999999             77888876

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.16  E-value=1.1e-06  Score=50.50  Aligned_cols=32  Identities=16%  Similarity=0.235  Sum_probs=28.2

Q ss_pred             CCcccccC--cccccccCcHHHHHHHHhcCCCCC
Q psy16775         30 AHLSYKCT--VCTATFGMYRQFENHVYSAHSVAP   61 (306)
Q Consensus        30 ~~~~y~C~--~C~~~f~~~~~L~~H~~~hh~~~~   61 (306)
                      +++||.|.  .|++.|.....|..|+++|.++++
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            34999999  599999999999999999987644

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.13  E-value=1.6e-06  Score=49.50  Aligned_cols=30  Identities=13%  Similarity=0.333  Sum_probs=27.0

Q ss_pred             CCcceecCc--cCcccCCHHHHHhhHhhhcCC
Q psy16775        214 AHLSYKCTV--CTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       214 ~~k~~~C~~--C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      ++++|.|.+  |++.|.+.+.|.+|+++|.++
T Consensus         5 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            5 KKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            788999995  999999999999999998764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.13  E-value=1.8e-07  Score=51.74  Aligned_cols=29  Identities=21%  Similarity=0.500  Sum_probs=23.3

Q ss_pred             cceecCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      +||.|+.||+.|.+...|.+|+++|.++.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~k   29 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVV   29 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCC
Confidence            36888888888888888888888876654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.13  E-value=1.4e-06  Score=46.40  Aligned_cols=28  Identities=18%  Similarity=0.322  Sum_probs=25.2

Q ss_pred             cceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      ++|.|..|++.|.+...|..|++.|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            3799999999999999999999998764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.12  E-value=1.7e-06  Score=47.51  Aligned_cols=29  Identities=21%  Similarity=0.362  Sum_probs=25.7

Q ss_pred             CcceecC--ccCcccCCHHHHHhhHhhhcCC
Q psy16775        215 HLSYKCT--VCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       215 ~k~~~C~--~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      +++|.|.  .|++.|.+...|..|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            3579999  8999999999999999998754

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.12  E-value=6.8e-07  Score=62.32  Aligned_cols=34  Identities=12%  Similarity=0.343  Sum_probs=29.5

Q ss_pred             CCCCcccccCcccccccCcHHHHHHHHhcCCCCC
Q psy16775         28 KPAHLSYKCTVCTATFGMYRQFENHVYSAHSVAP   61 (306)
Q Consensus        28 ~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~~~   61 (306)
                      +.+++||.|.+|++.|.....|..|+++|.++++
T Consensus        20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp   53 (88)
T 1x6f_A           20 RLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQ   53 (88)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCC
Confidence            4455999999999999999999999999987533

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.10  E-value=1.2e-06  Score=46.59  Aligned_cols=28  Identities=18%  Similarity=0.322  Sum_probs=25.1

Q ss_pred             cceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      ++|.|+.|++.|.+...|..|++.|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4799999999999999999999998764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.10  E-value=1.4e-06  Score=46.38  Aligned_cols=28  Identities=18%  Similarity=0.322  Sum_probs=25.8

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4899999999999999999999998764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.37  E-value=4.2e-07  Score=47.43  Aligned_cols=25  Identities=28%  Similarity=0.521  Sum_probs=22.0

Q ss_pred             cceecCccCcccCCHHHHHhhHhhh
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSA  240 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~h  240 (306)
                      +||.|+.||+.|.+...|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3699999999999999999998875

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.09  E-value=2.6e-06  Score=46.67  Aligned_cols=28  Identities=21%  Similarity=0.370  Sum_probs=26.1

Q ss_pred             cccccC--cccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCT--VCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~--~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      +||.|.  .|++.|.....|..|+++|.++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            799999  8999999999999999998764

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.36  E-value=4.3e-07  Score=49.01  Aligned_cols=28  Identities=21%  Similarity=0.377  Sum_probs=24.2

Q ss_pred             cceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      ++|.|..|++.|.+...|..|++.|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5799999999999999999999887653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.08  E-value=2.2e-06  Score=46.61  Aligned_cols=28  Identities=18%  Similarity=0.402  Sum_probs=24.9

Q ss_pred             cceecC--ccCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCT--VCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~--~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      +||.|+  .||+.|.+...|..|+++|.++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            379998  9999999999999999998654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.08  E-value=1.5e-06  Score=46.26  Aligned_cols=28  Identities=18%  Similarity=0.322  Sum_probs=25.8

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      +||.|.+|++.|.....|..|+++|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            4899999999999999999999998764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.08  E-value=1.6e-06  Score=45.46  Aligned_cols=26  Identities=23%  Similarity=0.516  Sum_probs=23.6

Q ss_pred             ccccCcccccccCcHHHHHHHHhcCC
Q psy16775         33 SYKCTVCTATFGMYRQFENHVYSAHS   58 (306)
Q Consensus        33 ~y~C~~C~~~f~~~~~L~~H~~~hh~   58 (306)
                      ||.|..|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            69999999999999999999998865

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.08  E-value=1.9e-06  Score=49.18  Aligned_cols=28  Identities=18%  Similarity=0.164  Sum_probs=25.3

Q ss_pred             cCCCCCccccc--cccccCChHHHHhHhhh
Q psy16775        139 IYNRPPLNCQK--CQFRFFTDQGLERHLLG  166 (306)
Q Consensus       139 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~  166 (306)
                      |+++++|.|.+  |++.|...+.|..|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~   32 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRW   32 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            45899999995  99999999999999993

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.35  E-value=4.7e-07  Score=48.53  Aligned_cols=28  Identities=18%  Similarity=0.357  Sum_probs=23.9

Q ss_pred             cceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      +||.|..|++.|.+...|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3699999999999999999999887653

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.32  E-value=5.6e-07  Score=48.22  Aligned_cols=28  Identities=18%  Similarity=0.357  Sum_probs=25.6

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4899999999999999999999998764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.03  E-value=2.9e-06  Score=46.16  Aligned_cols=28  Identities=18%  Similarity=0.402  Sum_probs=25.6

Q ss_pred             cccccC--cccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCT--VCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~--~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      +||.|.  .|++.|.....|..|+++|.++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            489998  9999999999999999998764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.28  E-value=7.1e-07  Score=46.51  Aligned_cols=25  Identities=28%  Similarity=0.521  Sum_probs=23.4

Q ss_pred             cccccCcccccccCcHHHHHHHHhc
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSA   56 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~h   56 (306)
                      +||.|.+||+.|.....|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4899999999999999999999876

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.27  E-value=7.3e-07  Score=48.04  Aligned_cols=28  Identities=21%  Similarity=0.377  Sum_probs=25.9

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            7899999999999999999999998764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.96  E-value=2e-06  Score=52.07  Aligned_cols=30  Identities=13%  Similarity=0.257  Sum_probs=26.3

Q ss_pred             cccCCCCCcccc--ccccccCChHHHHhHhhh
Q psy16775        137 KMIYNRPPLNCQ--KCQFRFFTDQGLERHLLG  166 (306)
Q Consensus       137 ~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~  166 (306)
                      ..|+++++|.|+  .|++.|...+.|..|+++
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~   42 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHH
Confidence            345699999996  799999999999999993

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.95  E-value=1.4e-06  Score=52.87  Aligned_cols=34  Identities=18%  Similarity=0.301  Sum_probs=29.6

Q ss_pred             hhcCCCCCCCCcccccC--cccccccCcHHHHHHHHhcCCC
Q psy16775         21 RDHNMSLKPAHLSYKCT--VCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        21 ~~H~~~~~~~~~~y~C~--~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      ..|.++     +||.|.  .|++.|.....|..|+++|.++
T Consensus        11 ~~H~~~-----k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           11 VKEMPD-----KTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             CEEETT-----TEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hccCCC-----CCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            457666     999996  7999999999999999999764

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.95  E-value=3.7e-06  Score=45.15  Aligned_cols=27  Identities=19%  Similarity=0.380  Sum_probs=23.3

Q ss_pred             cceecCccCcccCCHHHHHhh-HhhhcC
Q psy16775        216 LSYKCTVCTATFGMYRQFENH-VYSAHS  242 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H-~~~hh~  242 (306)
                      ++|.|+.|++.|.+...|..| +++|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccC
Confidence            369999999999999999999 666654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.92  E-value=4.6e-06  Score=44.76  Aligned_cols=28  Identities=18%  Similarity=0.341  Sum_probs=24.4

Q ss_pred             cccccCcccccccCcHHHHHH-HHhcCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENH-VYSAHSV   59 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H-~~~hh~~   59 (306)
                      +||.|..|++.|.....|..| +++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            479999999999999999999 6776653

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.87  E-value=7.6e-06  Score=43.41  Aligned_cols=26  Identities=23%  Similarity=0.507  Sum_probs=23.7

Q ss_pred             cceecC--ccCcccCCHHHHHhhHhhhc
Q psy16775        216 LSYKCT--VCTATFGMYRQFENHVYSAH  241 (306)
Q Consensus       216 k~~~C~--~C~~~f~~~~~L~~H~~~hh  241 (306)
                      ++|.|.  .|++.|.+...|..|+++|.
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            369999  99999999999999999875

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.80  E-value=1e-05  Score=42.89  Aligned_cols=27  Identities=22%  Similarity=0.493  Sum_probs=24.5

Q ss_pred             cccccC--cccccccCcHHHHHHHHhcCC
Q psy16775         32 LSYKCT--VCTATFGMYRQFENHVYSAHS   58 (306)
Q Consensus        32 ~~y~C~--~C~~~f~~~~~L~~H~~~hh~   58 (306)
                      ++|.|.  .|++.|.....|..|+++|.+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            479999  999999999999999998753

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.37  E-value=0.00034  Score=45.22  Aligned_cols=54  Identities=19%  Similarity=0.229  Sum_probs=41.4

Q ss_pred             ccCcCCCChHHHHHHHHHhccccccccccCCCCCcccc--ccccccCChHHHHhHhhhc
Q psy16775        111 NKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQ--KCQFRFFTDQGLERHLLGS  167 (306)
Q Consensus       111 ~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~  167 (306)
                      .|++.|.+...|..|+...|.....   .....+|.|.  .|++.+.....|..|++..
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~---~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDF---KHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCC---CCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCccc---CCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            6999999999999999656751100   0012389997  7999999999999999853

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.15  E-value=0.00029  Score=45.51  Aligned_cols=56  Identities=20%  Similarity=0.240  Sum_probs=43.2

Q ss_pred             cCC--CcchhhhHHH--HHHHHHhhcCCCCCCCC-cceecC--ccCcccCCHHHHHhhHhhhc
Q psy16775        186 GRC--PVCGRVYQWK--LLNHVARDHNMSLKPAH-LSYKCT--VCTATFGMYRQFENHVYSAH  241 (306)
Q Consensus       186 ~~C--~~C~~~f~~~--l~~H~~~~H~~~~~~~~-k~~~C~--~C~~~f~~~~~L~~H~~~hh  241 (306)
                      |.|  ..|++.|.+.  |..|+...|..+..... .+|.|.  .|++.+.....|..|++..|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            445  3599999988  99999778864432111 279996  89999999999999998865

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.37  E-value=0.0011  Score=48.37  Aligned_cols=30  Identities=20%  Similarity=0.250  Sum_probs=26.1

Q ss_pred             CCCCCcceecCccCcccCCHHHHHhhHhhh
Q psy16775        211 LKPAHLSYKCTVCTATFGMYRQFENHVYSA  240 (306)
Q Consensus       211 ~~~~~k~~~C~~C~~~f~~~~~L~~H~~~h  240 (306)
                      +.+|+++|.|..|++.|.+...|..|+++.
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            334889999999999999999999998654

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.24  E-value=0.0055  Score=45.37  Aligned_cols=61  Identities=16%  Similarity=0.102  Sum_probs=46.8

Q ss_pred             CCCcCCccCcCCCChHHHHHHHH-Hhcccc----------------------ccccccCCCCCccccccccccCChHHHH
Q psy16775        105 TSSSNNNKVKITPDLEQLRNHMQ-WIHKVK----------------------IHPKMIYNRPPLNCQKCQFRFFTDQGLE  161 (306)
Q Consensus       105 ~~~~C~~C~~~f~~~~~l~~H~~-~~H~~~----------------------~h~~~~~~~~~~~C~~C~~~f~~~~~l~  161 (306)
                      ..+.|.+|+..|.+...+..|.. ..|..+                      .+.....+.+.|-|.+|+..|.+...|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            35889999999999999999983 134311                      0111234567899999999999999999


Q ss_pred             hHhh
Q psy16775        162 RHLL  165 (306)
Q Consensus       162 ~H~~  165 (306)
                      .|..
T Consensus       111 ~H~~  114 (127)
T 1zu1_A          111 SHYI  114 (127)
T ss_dssp             HHHT
T ss_pred             HHHC
Confidence            9987

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.98  E-value=0.0019  Score=47.22  Aligned_cols=29  Identities=17%  Similarity=0.306  Sum_probs=26.3

Q ss_pred             ccCCCCCccccccccccCChHHHHhHhhh
Q psy16775        138 MIYNRPPLNCQKCQFRFFTDQGLERHLLG  166 (306)
Q Consensus       138 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  166 (306)
                      .++|+++|.|..|++.|.+...|..|+++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            34589999999999999999999999983

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.90  E-value=0.0045  Score=36.29  Aligned_cols=28  Identities=18%  Similarity=0.320  Sum_probs=23.7

Q ss_pred             cceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      .+|.|+.|+..|.....|+.||+.--++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~   38 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPE   38 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcc
Confidence            4699999999999999999999864433

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.88  E-value=0.0073  Score=35.42  Aligned_cols=23  Identities=22%  Similarity=0.008  Sum_probs=19.1

Q ss_pred             CCCcCCccCcCCCChHHHHHHHH
Q psy16775        105 TSSSNNNKVKITPDLEQLRNHMQ  127 (306)
Q Consensus       105 ~~~~C~~C~~~f~~~~~l~~H~~  127 (306)
                      .+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            46888888888888888888887

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.44  E-value=0.0034  Score=46.49  Aligned_cols=83  Identities=19%  Similarity=0.264  Sum_probs=46.5

Q ss_pred             CCCccccccccccCChHHHHhHhh--hccCCcchhhHHhhhcCCCCcCCCcchhhhHHHHHHHHHhhcCCCCCCCCccee
Q psy16775        142 RPPLNCQKCQFRFFTDQGLERHLL--GSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWKLLNHVARDHNMSLKPAHLSYK  219 (306)
Q Consensus       142 ~~~~~C~~C~~~f~~~~~l~~H~~--~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~l~~H~~~~H~~~~~~~~k~~~  219 (306)
                      .+++.|.+|+..|.+...+..|..  .|...+.....  ....+.+..    ++.+.  .     ..+. ....+.+.|-
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~--~~~~~~~~~----~~~~~--~-----~~~~-~~~~~~~~~~   95 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMA--INQGEDSVP----AKKFK--A-----APAE-ISDGEDRSKC   95 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHH--HTTCCCCCS----CCCCS--C-----CSSC-CSSCCCTTTE
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhc--ccCcccCCC----CCccC--C-----Cccc-cccCCCCCeE
Confidence            467999999999999999999995  22100000000  000000000    00000  0     0000 0111455789


Q ss_pred             cCccCcccCCHHHHHhhHh
Q psy16775        220 CTVCTATFGMYRQFENHVY  238 (306)
Q Consensus       220 C~~C~~~f~~~~~L~~H~~  238 (306)
                      |.+|+..|.+...|..|..
T Consensus        96 C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           96 CPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             ETTTTEECSSHHHHHHHHT
T ss_pred             cCCCCCEeCCHHHHHHHHC
Confidence            9999999999999999974

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.77  E-value=0.035  Score=43.14  Aligned_cols=80  Identities=20%  Similarity=0.316  Sum_probs=56.0

Q ss_pred             CCccc--cccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH-HHHHHHhhcCCCCCCCCccee
Q psy16775        143 PPLNC--QKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK-LLNHVARDHNMSLKPAHLSYK  219 (306)
Q Consensus       143 ~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~-l~~H~~~~H~~~~~~~~k~~~  219 (306)
                      ....|  .-|+..+. ...|..|...-              .-.+..|+.|+..+... |..|+ ...-     ..++..
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~~C--------------~~~~v~C~~C~~~~~r~~l~~H~-~~~C-----~~r~~~  139 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQAHC--------------EFALMDCPQCQRPFQKFHINIHI-LKDC-----PRRQVS  139 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHTTC--------------TTSEEECTTTCCEEEGGGHHHHH-HHTC-----TTCEEE
T ss_pred             cccCCCCCCCCceec-HhHHHHHHhcC--------------CceeeECCCCChHHHHHHHHHHh-hhhC-----CCCCeE
Confidence            34667  46877664 55777887521              22467899999988777 99998 4343     556788


Q ss_pred             cCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        220 CTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       220 C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      |..|+..|. ...|..|...+.++.
T Consensus       140 C~~C~~~~~-~~~l~~H~~~~~~~~  163 (170)
T 3hcs_A          140 CDNCAASMA-FEDKEIHDQNCPLAL  163 (170)
T ss_dssp             CTTTCCEEE-GGGHHHHHTTCCC--
T ss_pred             CCCCCCccC-HHHHHhHHHhCcChh
Confidence            999999875 577899998766553

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=91.99  E-value=0.12  Score=28.21  Aligned_cols=27  Identities=19%  Similarity=0.504  Sum_probs=24.6

Q ss_pred             ccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         33 SYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        33 ~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      .|.|++|.+.|.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            599999999999999999999887764

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=91.16  E-value=0.22  Score=27.23  Aligned_cols=26  Identities=19%  Similarity=0.519  Sum_probs=21.8

Q ss_pred             eecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        218 YKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       218 ~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      |.|++|.+.|.+...|..|....|..
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            88999999999999999998776654

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=88.01  E-value=0.36  Score=26.49  Aligned_cols=24  Identities=17%  Similarity=0.480  Sum_probs=22.2

Q ss_pred             cccccCcccccccCcHHHHHHHHh
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYS   55 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~   55 (306)
                      .++.|..|+-+|.....+..|++-
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhee
Confidence            689999999999999999999874

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=86.72  E-value=0.63  Score=25.51  Aligned_cols=26  Identities=15%  Similarity=0.390  Sum_probs=22.3

Q ss_pred             CcceecCccCcccCCHHHHHhhHhhh
Q psy16775        215 HLSYKCTVCTATFGMYRQFENHVYSA  240 (306)
Q Consensus       215 ~k~~~C~~C~~~f~~~~~L~~H~~~h  240 (306)
                      ..++.|..|+-+|.....+..|.+-.
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~Y   31 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHHT
T ss_pred             cCcCeeccccceehhhHHHhhhheec
Confidence            34689999999999999999998653

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=86.35  E-value=0.15  Score=39.41  Aligned_cols=75  Identities=16%  Similarity=0.285  Sum_probs=55.2

Q ss_pred             CcC--CccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCC
Q psy16775        107 SSN--NNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKD  184 (306)
Q Consensus       107 ~~C--~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~  184 (306)
                      ..|  ..|+..+. ...|..|.. . -         .-++..|+.|+..+ .+..|..|+.             ..=..+
T Consensus        83 v~C~n~GC~~~~~-~~~l~~H~~-~-C---------~~~~v~C~~C~~~~-~r~~l~~H~~-------------~~C~~r  136 (170)
T 3hcs_A           83 VKCPNEGCLHKME-LRHLEDHQA-H-C---------EFALMDCPQCQRPF-QKFHINIHIL-------------KDCPRR  136 (170)
T ss_dssp             EECCSTTCCCEEE-GGGHHHHHT-T-C---------TTSEEECTTTCCEE-EGGGHHHHHH-------------HTCTTC
T ss_pred             cCCCCCCCCceec-HhHHHHHHh-c-C---------CceeeECCCCChHH-HHHHHHHHhh-------------hhCCCC
Confidence            445  36776554 456778863 2 2         34578999999988 5778999986             233556


Q ss_pred             CcCCCcchhhhHHH-HHHHHHhhcC
Q psy16775        185 GGRCPVCGRVYQWK-LLNHVARDHN  208 (306)
Q Consensus       185 ~~~C~~C~~~f~~~-l~~H~~~~H~  208 (306)
                      ...|+.|+..+... |..|. ..++
T Consensus       137 ~~~C~~C~~~~~~~~l~~H~-~~~~  160 (170)
T 3hcs_A          137 QVSCDNCAASMAFEDKEIHD-QNCP  160 (170)
T ss_dssp             EEECTTTCCEEEGGGHHHHH-TTCC
T ss_pred             CeECCCCCCccCHHHHHhHH-HhCc
Confidence            77899999999888 99998 7776

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=85.13  E-value=0.14  Score=33.77  Aligned_cols=50  Identities=22%  Similarity=0.371  Sum_probs=37.2

Q ss_pred             cCCCCcCCCcchhhhHHH-HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhH
Q psy16775        181 KGKDGGRCPVCGRVYQWK-LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHV  237 (306)
Q Consensus       181 ~~~~~~~C~~C~~~f~~~-l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~  237 (306)
                      ....-|.|+.||.++.-+ |..|. ..-.     +...|.|-.|+..|.. ...+.|-
T Consensus         6 ~~MV~F~C~~Cgd~lKK~kv~~H~-~~Cr-----~~~~~SCIDC~~~F~~-~~y~~Ht   56 (79)
T 1wjv_A            6 SGMVFFTCNACGESVKKIQVEKHV-SNCR-----NCECLSCIDCGKDFWG-DDYKSHV   56 (79)
T ss_dssp             CCCCEEEESSSCCEEETTHHHHHH-HHCT-----TCCEEEETTTTEEEEG-GGTTTCC
T ss_pred             CceeEEEcCCCCCeeecccchhHH-hhCC-----CCCcEEecccCCeeCC-CCEeCEe
Confidence            334568999999998887 99998 4433     3335999999999974 5566663

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=84.08  E-value=0.65  Score=24.56  Aligned_cols=25  Identities=20%  Similarity=0.576  Sum_probs=21.7

Q ss_pred             eecCccCcccCCHHHHHhhHhhhcC
Q psy16775        218 YKCTVCTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       218 ~~C~~C~~~f~~~~~L~~H~~~hh~  242 (306)
                      -.|..|.+.|+...+|..|++-.|.
T Consensus        10 qhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4599999999999999999987553

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=83.45  E-value=0.22  Score=32.71  Aligned_cols=44  Identities=27%  Similarity=0.743  Sum_probs=28.2

Q ss_pred             CcCCCcchhhhHHH-HHHHHHhhcCCC----CC------CCCcceecCccCcccC
Q psy16775        185 GGRCPVCGRVYQWK-LLNHVARDHNMS----LK------PAHLSYKCTVCTATFG  228 (306)
Q Consensus       185 ~~~C~~C~~~f~~~-l~~H~~~~H~~~----~~------~~~k~~~C~~C~~~f~  228 (306)
                      .-+|++||....+. |..-|...-...    ++      -.+-.|+|+.||..|.
T Consensus         8 ~~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEFy   62 (95)
T 2k5c_A            8 MAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFY   62 (95)
T ss_dssp             CEECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEEE
T ss_pred             cccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHHh
Confidence            46899999999888 776652211100    00      0123699999999985

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=83.36  E-value=0.48  Score=31.93  Aligned_cols=26  Identities=27%  Similarity=0.671  Sum_probs=21.6

Q ss_pred             ceecCccCcccCCHHHHHhhHhhhcCCCC
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYSAHSVAP  245 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~hh~~~~  245 (306)
                      -..|-+||+.|.   .|++|+.++|+..+
T Consensus        21 ~iiClecGK~fK---~LkRHL~~~hgltp   46 (87)
T 2jsp_A           21 HIVCLECGGSFK---SLKRHLTTHHSMTP   46 (87)
T ss_dssp             CEECTBTCCEES---BHHHHHHHTTCSCH
T ss_pred             ceEecccchhhH---HHHHHHHHccCCCH
Confidence            378999999997   58899999887654

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=83.07  E-value=0.89  Score=24.04  Aligned_cols=26  Identities=19%  Similarity=0.556  Sum_probs=22.8

Q ss_pred             ccccCcccccccCcHHHHHHHHhcCC
Q psy16775         33 SYKCTVCTATFGMYRQFENHVYSAHS   58 (306)
Q Consensus        33 ~y~C~~C~~~f~~~~~L~~H~~~hh~   58 (306)
                      .-.|..|.+.|..-.+|..|++..|.
T Consensus         9 kqhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A            9 KQHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            35699999999999999999997664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	306
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.52
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.47
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.2
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.13
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.08
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.07
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.06
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.05
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.04
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.04
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.03
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.0
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.0
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.0
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.0
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.95
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.93
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.91
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.9
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.87
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.86
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.85
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.85
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.8
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.73
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.69
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.68
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.62
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.62
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.59
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.57
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.56
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.54
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.49
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.49
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.46
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.44
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.42
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.39
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.35
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.33
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.31
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.28
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.19
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.14
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.11
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.06
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.94
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.92
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.91
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.84
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.84
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.76
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.73
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.73
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.66
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.65
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.62
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.59
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.59
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.52
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.46
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.45
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.44
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.34
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.31
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.29
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.27
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.23
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.21
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.2
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.2
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.15
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.08
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.07
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.03
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.02
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.95
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.87
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.8
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.77
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.48
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.45
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.35
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.19
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.13
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.06
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.02
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.9
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.66
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.62
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.48
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.34
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.2
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.8
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.79
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.64
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.79
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.55
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	93.44
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.38
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.16
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.12
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	92.96
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.64
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.63
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.94
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.66
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	91.23
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.58
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	90.53
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	90.4
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	89.53
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.51
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.5
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	89.36
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	89.04
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.75
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	88.74
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	88.63
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	84.15
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	83.9
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	83.86
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	81.57
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	81.25

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=9.5e-16  Score=95.49  Aligned_cols=51  Identities=25%  Similarity=0.475  Sum_probs=47.7

Q ss_pred             CCCcCCCcchhhhHHH--HHHHHHhhcCCCCCCCCcceecCccCcccCCHHHHHhhHhhh
Q psy16775        183 KDGGRCPVCGRVYQWK--LLNHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSA  240 (306)
Q Consensus       183 ~~~~~C~~C~~~f~~~--l~~H~~~~H~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~h  240 (306)
                      |+||.|+ ||+.|...  |..|+ +.|+     |++||.|.+||++|.+.+.|.+|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~-~~Ht-----~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHM-SMHL-----GLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHH-HHHS-----CCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHh-hccc-----cccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6899995 99999998  99999 8898     889999999999999999999999875

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=3.4e-15  Score=92.91  Aligned_cols=51  Identities=29%  Similarity=0.583  Sum_probs=47.5

Q ss_pred             CCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchhhhHHH--HHHHHHhhc
Q psy16775        142 RPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGRVYQWK--LLNHVARDH  207 (306)
Q Consensus       142 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~~f~~~--l~~H~~~~H  207 (306)
                      |+||.|+ ||++|.....|..|++             +|++++||.|.+||+.|...  |..|+ +.|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~-------------~Ht~ekpy~C~~C~k~F~~~~~L~~H~-r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMS-------------MHLGLRPYGCGVCGKKFKMKHHLVGHM-KIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHH-------------HHSCCCSEECTTTSCEESSSHHHHHHH-TTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhh-------------ccccccCCcCCCcCCEecCHHHHHHHH-hcC
Confidence            5799995 9999999999999999             88999999999999999987  99999 655

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=4.8e-12  Score=71.67  Aligned_cols=38  Identities=24%  Similarity=0.448  Sum_probs=34.5

Q ss_pred             CCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        141 NRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       141 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      .++||+|.+||++|...++|.+|++.            +|++++||.|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~------------~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQ------------VHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHH------------TSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcC------------ccCCCcCcCCcC
Confidence            57899999999999999999999863            689999999975

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.7e-11  Score=69.51  Aligned_cols=32  Identities=19%  Similarity=0.284  Sum_probs=30.4

Q ss_pred             ccccccCCCCCccccccccccCChHHHHhHhh
Q psy16775        134 IHPKMIYNRPPLNCQKCQFRFFTDQGLERHLL  165 (306)
Q Consensus       134 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  165 (306)
                      .|+++|++++||.|++||++|...+.|..|++
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r   33 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRR   33 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHT
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCc
Confidence            47788889999999999999999999999999

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=3.2e-11  Score=67.31  Aligned_cols=30  Identities=23%  Similarity=0.476  Sum_probs=28.2

Q ss_pred             CCcceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        214 AHLSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      |++||+|.+||++|.+.++|.+|+++|+++
T Consensus         5 gekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           5 GEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             CCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            999999999999999999999999998765

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=4.3e-11  Score=64.97  Aligned_cols=30  Identities=17%  Similarity=0.309  Sum_probs=28.1

Q ss_pred             CCcceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        214 AHLSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      |+|||+|..||++|.++++|.+|+++|.++
T Consensus         4 gekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           4 GEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            899999999999999999999999998764

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=1.8e-11  Score=69.36  Aligned_cols=37  Identities=16%  Similarity=0.321  Sum_probs=33.1

Q ss_pred             HHHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         17 NHVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        17 ~H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      +|+ +.|+++     +||+|.+||++|...++|..|+++|.|+
T Consensus         2 rH~-~~Ht~e-----kpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSE-WQQRER-----RRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCC-SCCCCS-----CSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccC-cccCCC-----CCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            466 778877     9999999999999999999999999874

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=4.6e-11  Score=64.86  Aligned_cols=28  Identities=21%  Similarity=0.363  Sum_probs=26.6

Q ss_pred             ccCCCCCccccccccccCChHHHHhHhh
Q psy16775        138 MIYNRPPLNCQKCQFRFFTDQGLERHLL  165 (306)
Q Consensus       138 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~  165 (306)
                      +|++++||+|.+|+++|...+.|..|++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r   28 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQR   28 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHH
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhcc
Confidence            4679999999999999999999999999

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=4.2e-11  Score=62.34  Aligned_cols=28  Identities=14%  Similarity=0.554  Sum_probs=26.1

Q ss_pred             CcceecCccCcccCCHHHHHhhHhhhcC
Q psy16775        215 HLSYKCTVCTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       215 ~k~~~C~~C~~~f~~~~~L~~H~~~hh~  242 (306)
                      ||||+|++|+++|.++++|.+|+++|.|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5789999999999999999999999865

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=5.4e-11  Score=66.26  Aligned_cols=31  Identities=23%  Similarity=0.550  Sum_probs=28.2

Q ss_pred             CCcceecCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        214 AHLSYKCTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      |+|||+|++|++.|.++++|++|++.+|.++
T Consensus         5 gekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           5 GEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             CCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            9999999999999999999999998877653

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.03  E-value=8.4e-11  Score=66.08  Aligned_cols=33  Identities=18%  Similarity=0.306  Sum_probs=30.6

Q ss_pred             cccccCCCCCccccccccccCChHHHHhHhhhc
Q psy16775        135 HPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGS  167 (306)
Q Consensus       135 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  167 (306)
                      |.|+|++++||+|++|+++|..++.|..|+++|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            678899999999999999999999999999944

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1e-10  Score=65.21  Aligned_cols=33  Identities=24%  Similarity=0.456  Sum_probs=29.9

Q ss_pred             hcCCCCCCCCcccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         22 DHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        22 ~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      +|+++     +||+|.+||++|..++.|..|+++|+++
T Consensus         2 ~HTge-----kPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGE-----KPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCC-----CCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCC-----CCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            56666     9999999999999999999999999875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.00  E-value=1.2e-10  Score=64.12  Aligned_cols=30  Identities=13%  Similarity=0.400  Sum_probs=27.7

Q ss_pred             CCcceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        214 AHLSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      |+|||+|.+|++.|.++.+|.+|+++|...
T Consensus         4 GekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           4 GKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCccccCCCCCCcccChHHHHHHccccCCc
Confidence            899999999999999999999999997653

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=9.8e-11  Score=65.19  Aligned_cols=32  Identities=25%  Similarity=0.552  Sum_probs=29.0

Q ss_pred             cccCCCCCccccccccccCChHHHHhHhhhcc
Q psy16775        137 KMIYNRPPLNCQKCQFRFFTDQGLERHLLGSH  168 (306)
Q Consensus       137 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  168 (306)
                      |+|+|++||+|++|++.|..+++|..|++.+|
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            46789999999999999999999999998655

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1e-10  Score=66.04  Aligned_cols=36  Identities=19%  Similarity=0.273  Sum_probs=32.5

Q ss_pred             CCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccc
Q psy16775        105 TSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQK  149 (306)
Q Consensus       105 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~  149 (306)
                      ++|.|++||+.|...++|.+|++.+|.         +++||+|++
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht---------~ekpy~C~i   39 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHT---------SERPHKCQV   39 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSC---------CCCCCCSSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccC---------CCcCcCCcC
Confidence            468888999999999999999976788         999999985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.95  E-value=1.2e-10  Score=60.58  Aligned_cols=28  Identities=14%  Similarity=0.554  Sum_probs=26.2

Q ss_pred             CcccccCcccccccCcHHHHHHHHhcCC
Q psy16775         31 HLSYKCTVCTATFGMYRQFENHVYSAHS   58 (306)
Q Consensus        31 ~~~y~C~~C~~~f~~~~~L~~H~~~hh~   58 (306)
                      ||||+|.+|++.|....+|..|+++|.|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            3899999999999999999999999865

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.93  E-value=2.9e-10  Score=59.85  Aligned_cols=28  Identities=29%  Similarity=0.532  Sum_probs=26.1

Q ss_pred             cceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      |||.|++||++|.+.+.|.+|+++|.++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            4799999999999999999999999875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.91  E-value=2.1e-10  Score=64.44  Aligned_cols=34  Identities=15%  Similarity=0.285  Sum_probs=30.4

Q ss_pred             HHHhhcCCCCCCCCcccccCcccccccCcHHHHHHHHhcC
Q psy16775         18 HVARDHNMSLKPAHLSYKCTVCTATFGMYRQFENHVYSAH   57 (306)
Q Consensus        18 H~~~~H~~~~~~~~~~y~C~~C~~~f~~~~~L~~H~~~hh   57 (306)
                      |. +.|++|     +||+|.+|++.|..+++|..|+++|-
T Consensus         2 h~-R~HTge-----KPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 ST-RGSTGI-----KPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CS-STTCCS-----SSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CC-CccCCc-----cCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            44 677777     99999999999999999999999874

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=3.9e-10  Score=61.96  Aligned_cols=28  Identities=29%  Similarity=0.466  Sum_probs=26.3

Q ss_pred             cCCCCCccccccccccCChHHHHhHhhh
Q psy16775        139 IYNRPPLNCQKCQFRFFTDQGLERHLLG  166 (306)
Q Consensus       139 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~  166 (306)
                      |+|++||+|++|++.|..+++|..|+++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~   29 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKV   29 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccc
Confidence            4699999999999999999999999993

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=4.9e-10  Score=58.80  Aligned_cols=28  Identities=14%  Similarity=0.421  Sum_probs=26.2

Q ss_pred             cceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      |||.|++||++|.+++.|.+|+++|.++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            5799999999999999999999999875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=6.7e-10  Score=58.27  Aligned_cols=28  Identities=14%  Similarity=0.421  Sum_probs=26.7

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      |||.|.+||+.|..++.|..|+++|.++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            5899999999999999999999999886

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.85  E-value=6.9e-10  Score=58.34  Aligned_cols=23  Identities=26%  Similarity=0.550  Sum_probs=22.3

Q ss_pred             CCccccccccccCChHHHHhHhh
Q psy16775        143 PPLNCQKCQFRFFTDQGLERHLL  165 (306)
Q Consensus       143 ~~~~C~~C~~~f~~~~~l~~H~~  165 (306)
                      +||.|++|+++|...+.|.+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r   23 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYR   23 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHH
T ss_pred             CcCCCCCCCCCCCCchHcccccC
Confidence            58999999999999999999999

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=5.7e-10  Score=56.41  Aligned_cols=26  Identities=27%  Similarity=0.448  Sum_probs=24.2

Q ss_pred             cceecCccCcccCCHHHHHhhHhhhc
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSAH  241 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~hh  241 (306)
                      |||+|..||+.|.+.++|.+|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            58999999999999999999999873

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=9.6e-10  Score=55.57  Aligned_cols=26  Identities=27%  Similarity=0.448  Sum_probs=24.4

Q ss_pred             cccccCcccccccCcHHHHHHHHhcC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAH   57 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh   57 (306)
                      |||+|.+||++|...+.|..|+++|.
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999873

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=2.2e-09  Score=59.39  Aligned_cols=33  Identities=18%  Similarity=0.423  Sum_probs=30.7

Q ss_pred             ccccc--cccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCc
Q psy16775        145 LNCQK--CQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPV  190 (306)
Q Consensus       145 ~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~  190 (306)
                      |.|+.  |+++|.+++.|++|++             +|++++||.|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r-------------~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMK-------------LHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHH-------------HHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccC-------------eeCCCCCEeCCC
Confidence            78987  9999999999999999             889999999973

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=4.8e-09  Score=55.29  Aligned_cols=28  Identities=21%  Similarity=0.477  Sum_probs=25.6

Q ss_pred             cceecCc--cCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCTV--CTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~~--C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      |||+|++  ||++|.+.++|++|+++|.++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5799998  999999999999999998764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=4.5e-09  Score=55.50  Aligned_cols=28  Identities=21%  Similarity=0.463  Sum_probs=25.6

Q ss_pred             cceecCc--cCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCTV--CTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~~--C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      |||.|++  ||++|.+.++|++|+++|.++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5899987  999999999999999998764

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=9.9e-09  Score=54.03  Aligned_cols=28  Identities=21%  Similarity=0.477  Sum_probs=26.2

Q ss_pred             cccccCc--ccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCTV--CTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~~--C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      |||+|++  |++.|...+.|..|+++|.|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5899999  999999999999999999874

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.62  E-value=3.5e-09  Score=62.51  Aligned_cols=27  Identities=15%  Similarity=0.310  Sum_probs=25.6

Q ss_pred             cCCCCCccccc--cccccCChHHHHhHhh
Q psy16775        139 IYNRPPLNCQK--CQFRFFTDQGLERHLL  165 (306)
Q Consensus       139 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~  165 (306)
                      |++++||+|++  |+++|...+.|..|++
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r   41 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQ   41 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHH
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcc
Confidence            55999999988  9999999999999999

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.59  E-value=3.5e-09  Score=62.51  Aligned_cols=39  Identities=18%  Similarity=0.335  Sum_probs=33.4

Q ss_pred             HHHHHHHhhcCCCCCCCCcccccCc--ccccccCcHHHHHHHHhcCCC
Q psy16775         14 KLLNHVARDHNMSLKPAHLSYKCTV--CTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        14 ~l~~H~~~~H~~~~~~~~~~y~C~~--C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      .|.+|+ . |.++     +||+|.+  |++.|...++|..|+++|.++
T Consensus         6 ~l~~h~-~-h~ge-----kpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           6 SIDKYV-K-EMPD-----KTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSC-E-EETT-----TEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hhcchh-h-ccCC-----CCeECCcCCCCccccCchHHHhhcccccCC
Confidence            355666 4 7766     9999987  999999999999999999886

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=1e-08  Score=54.08  Aligned_cols=28  Identities=21%  Similarity=0.463  Sum_probs=25.9

Q ss_pred             cccccCc--ccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCTV--CTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~~--C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      |||+|++  |++.|...+.|..|+++|.|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5899988  999999999999999999874

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.56  E-value=1.9e-08  Score=53.81  Aligned_cols=29  Identities=21%  Similarity=0.377  Sum_probs=26.0

Q ss_pred             CcceecCc--cCcccCCHHHHHhhHhhhcCC
Q psy16775        215 HLSYKCTV--CTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       215 ~k~~~C~~--C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      |+||.|++  ||++|.+..+|++|+++|...
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            57899988  999999999999999998654

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=2.3e-08  Score=53.15  Aligned_cols=28  Identities=18%  Similarity=0.402  Sum_probs=25.1

Q ss_pred             cceecC--ccCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCT--VCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~--~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      |||.|+  .||++|.+.++|.+|+++|.++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            479996  5999999999999999998775

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.49  E-value=2.5e-08  Score=51.99  Aligned_cols=27  Identities=22%  Similarity=0.524  Sum_probs=24.7

Q ss_pred             cceecCc--cCcccCCHHHHHhhHhhhcC
Q psy16775        216 LSYKCTV--CTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       216 k~~~C~~--C~~~f~~~~~L~~H~~~hh~  242 (306)
                      |||+|++  |+++|.+.++|++|+++|.|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5899988  99999999999999999864

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=2.5e-08  Score=55.04  Aligned_cols=33  Identities=21%  Similarity=0.218  Sum_probs=29.0

Q ss_pred             CcCCc--cCcCCCChHHHHHHHHHhccccccccccCCCCCccccc
Q psy16775        107 SSNNN--KVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQK  149 (306)
Q Consensus       107 ~~C~~--C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~  149 (306)
                      |.|+.  |++.|.....|++|++ .|.         +++||+|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r-~Ht---------gekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMK-LHS---------DTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHH-HHH---------TSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccC-eeC---------CCCCEeCCC
Confidence            56655  9999999999999997 787         999999973

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=4.7e-08  Score=46.69  Aligned_cols=26  Identities=23%  Similarity=0.506  Sum_probs=23.6

Q ss_pred             ceecCccCcccCCHHHHHhhHhhhcC
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~hh~  242 (306)
                      |.+|++|++.|+++..|+.||+.|.+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            47899999999999999999999764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=6.1e-08  Score=51.49  Aligned_cols=23  Identities=35%  Similarity=0.654  Sum_probs=21.4

Q ss_pred             CCcccc--ccccccCChHHHHhHhh
Q psy16775        143 PPLNCQ--KCQFRFFTDQGLERHLL  165 (306)
Q Consensus       143 ~~~~C~--~C~~~f~~~~~l~~H~~  165 (306)
                      +||.|+  .|+++|...++|.+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r   25 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKR   25 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHT
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcC
Confidence            589996  59999999999999999

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.42  E-value=8.5e-08  Score=51.16  Aligned_cols=29  Identities=21%  Similarity=0.377  Sum_probs=26.3

Q ss_pred             CcccccCc--ccccccCcHHHHHHHHhcCCC
Q psy16775         31 HLSYKCTV--CTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        31 ~~~y~C~~--C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      ++||.|.+  |++.|....+|.+|+++|...
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            38999998  999999999999999998753

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=3.6e-08  Score=50.75  Aligned_cols=26  Identities=19%  Similarity=0.589  Sum_probs=23.7

Q ss_pred             cceecCc--cCcccCCHHHHHhhHhhhc
Q psy16775        216 LSYKCTV--CTATFGMYRQFENHVYSAH  241 (306)
Q Consensus       216 k~~~C~~--C~~~f~~~~~L~~H~~~hh  241 (306)
                      |||.|+.  ||++|.+..+|++|+++|.
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4799988  9999999999999999874

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.35  E-value=1.4e-07  Score=46.67  Aligned_cols=27  Identities=15%  Similarity=0.383  Sum_probs=24.5

Q ss_pred             CcceecCccCcccCCHHHHHhhHhhhc
Q psy16775        215 HLSYKCTVCTATFGMYRQFENHVYSAH  241 (306)
Q Consensus       215 ~k~~~C~~C~~~f~~~~~L~~H~~~hh  241 (306)
                      |+||.|++||+.|.+....++|.+.|-
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            578999999999999999999998863

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.33  E-value=6.4e-08  Score=50.37  Aligned_cols=27  Identities=22%  Similarity=0.524  Sum_probs=24.9

Q ss_pred             cccccCc--ccccccCcHHHHHHHHhcCC
Q psy16775         32 LSYKCTV--CTATFGMYRQFENHVYSAHS   58 (306)
Q Consensus        32 ~~y~C~~--C~~~f~~~~~L~~H~~~hh~   58 (306)
                      |||+|.+  |++.|...++|..|+++|.|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5899988  99999999999999999864

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=2.3e-07  Score=46.49  Aligned_cols=30  Identities=27%  Similarity=0.481  Sum_probs=26.9

Q ss_pred             CcceecCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        215 HLSYKCTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       215 ~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      ++||.|++|+.+|.++..+..|++.|.+..
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~v   30 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSV   30 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCcc
Confidence            478999999999999999999999987653

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.2e-07  Score=48.79  Aligned_cols=26  Identities=19%  Similarity=0.589  Sum_probs=24.2

Q ss_pred             cccccCc--ccccccCcHHHHHHHHhcC
Q psy16775         32 LSYKCTV--CTATFGMYRQFENHVYSAH   57 (306)
Q Consensus        32 ~~y~C~~--C~~~f~~~~~L~~H~~~hh   57 (306)
                      +||.|+.  ||+.|...++|..|+++|.
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5899988  9999999999999999874

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=3.9e-07  Score=43.47  Aligned_cols=26  Identities=23%  Similarity=0.506  Sum_probs=23.8

Q ss_pred             ccccCcccccccCcHHHHHHHHhcCC
Q psy16775         33 SYKCTVCTATFGMYRQFENHVYSAHS   58 (306)
Q Consensus        33 ~y~C~~C~~~f~~~~~L~~H~~~hh~   58 (306)
                      |.+|++|++.|..+..|..|++.|.+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999998864

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.14  E-value=5.9e-07  Score=44.35  Aligned_cols=26  Identities=15%  Similarity=0.422  Sum_probs=24.4

Q ss_pred             CcccccCcccccccCcHHHHHHHHhc
Q psy16775         31 HLSYKCTVCTATFGMYRQFENHVYSA   56 (306)
Q Consensus        31 ~~~y~C~~C~~~f~~~~~L~~H~~~h   56 (306)
                      ++||.|.+||+.|.......+|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            38999999999999999999999987

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=7.7e-07  Score=44.56  Aligned_cols=28  Identities=25%  Similarity=0.631  Sum_probs=24.5

Q ss_pred             CCCccccccccccCChHHHHhHhhhccC
Q psy16775        142 RPPLNCQKCQFRFFTDQGLERHLLGSHG  169 (306)
Q Consensus       142 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~  169 (306)
                      ++||.|++|+..|..+..+.-|++.|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            5799999999999999999999996654

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.3e-06  Score=43.81  Aligned_cols=27  Identities=26%  Similarity=0.588  Sum_probs=24.6

Q ss_pred             cceecCc--cCcccCCHHHHHhhHhhhcC
Q psy16775        216 LSYKCTV--CTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       216 k~~~C~~--C~~~f~~~~~L~~H~~~hh~  242 (306)
                      |||.|.+  |+++|...++|++|++.+|+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4799987  99999999999999998875

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=2.5e-06  Score=41.67  Aligned_cols=28  Identities=21%  Similarity=0.358  Sum_probs=26.2

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      +||+|..|...-.+.+.|..|++.|.|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CcceeeecccccCCchheEEeeecccCc
Confidence            8999999999999999999999998763

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=3.1e-06  Score=45.95  Aligned_cols=25  Identities=28%  Similarity=0.640  Sum_probs=23.1

Q ss_pred             CCcceecCccCcccCCHHHHHhhHh
Q psy16775        214 AHLSYKCTVCTATFGMYRQFENHVY  238 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~~~~~L~~H~~  238 (306)
                      |.|||.|.+|++.|.++.++.+|.-
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            6789999999999999999999974

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=3.2e-06  Score=42.32  Aligned_cols=27  Identities=26%  Similarity=0.588  Sum_probs=25.0

Q ss_pred             cccccCc--ccccccCcHHHHHHHHhcCC
Q psy16775         32 LSYKCTV--CTATFGMYRQFENHVYSAHS   58 (306)
Q Consensus        32 ~~y~C~~--C~~~f~~~~~L~~H~~~hh~   58 (306)
                      +||.|.+  |+++|...++|.+|++.+||
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5899988  99999999999999999875

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=5.9e-06  Score=40.34  Aligned_cols=29  Identities=21%  Similarity=0.351  Sum_probs=25.7

Q ss_pred             CcceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        215 HLSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       215 ~k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      ++||+|.+|.+.-...+.|..|++.|.++
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            46899999999999999999999998763

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=6.6e-06  Score=42.12  Aligned_cols=33  Identities=27%  Similarity=0.420  Sum_probs=29.3

Q ss_pred             CCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcC
Q psy16775        142 RPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGR  187 (306)
Q Consensus       142 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~  187 (306)
                      .+...|++||+.|.....|.+|..             .|.+++||.
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhkl-------------shs~ekpys   35 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKL-------------SHSGEKPYS   35 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGG-------------GSCSCCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhc-------------ccCCCCCCC
Confidence            456789999999999999999999             778999984

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=1e-05  Score=39.28  Aligned_cols=27  Identities=15%  Similarity=0.266  Sum_probs=23.8

Q ss_pred             ceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      ...|..||+.|...+.|++|+..|+++
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            377999999999999999999988763

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=9.4e-06  Score=39.98  Aligned_cols=28  Identities=18%  Similarity=0.370  Sum_probs=25.7

Q ss_pred             cceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      +||+|+.|..-..+.++|..|++..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            4799999999999999999999998874

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.73  E-value=1.2e-05  Score=37.75  Aligned_cols=24  Identities=25%  Similarity=0.538  Sum_probs=22.1

Q ss_pred             eecCccCcccCCHHHHHhhHhhhc
Q psy16775        218 YKCTVCTATFGMYRQFENHVYSAH  241 (306)
Q Consensus       218 ~~C~~C~~~f~~~~~L~~H~~~hh  241 (306)
                      |+|..|.++|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999863

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.66  E-value=1.5e-05  Score=40.15  Aligned_cols=27  Identities=26%  Similarity=0.501  Sum_probs=24.4

Q ss_pred             ceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      ||.|.+|++.|.++.-|.+|+++-|++
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            599999999999999999999887765

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=1.8e-05  Score=38.37  Aligned_cols=22  Identities=32%  Similarity=0.578  Sum_probs=20.4

Q ss_pred             CccccccccccCChHHHHhHhh
Q psy16775        144 PLNCQKCQFRFFTDQGLERHLL  165 (306)
Q Consensus       144 ~~~C~~C~~~f~~~~~l~~H~~  165 (306)
                      ...|..||++|...+.|++|..
T Consensus         2 ~hvc~ecgkaf~essklkrh~l   23 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQL   23 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGG
T ss_pred             cchHHHHhHHHHHHHHHHHHhh
Confidence            3689999999999999999999

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=1.9e-05  Score=38.92  Aligned_cols=28  Identities=21%  Similarity=0.472  Sum_probs=25.5

Q ss_pred             cceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      +||.|..|.++-...++|+.|+++.|+.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            4799999999999999999999998865

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=1.5e-05  Score=39.18  Aligned_cols=23  Identities=30%  Similarity=0.670  Sum_probs=22.0

Q ss_pred             ccccCcccccccCcHHHHHHHHh
Q psy16775         33 SYKCTVCTATFGMYRQFENHVYS   55 (306)
Q Consensus        33 ~y~C~~C~~~f~~~~~L~~H~~~   55 (306)
                      ||.|..|...|..+.+|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            79999999999999999999985

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=2.1e-05  Score=38.03  Aligned_cols=26  Identities=19%  Similarity=0.398  Sum_probs=23.9

Q ss_pred             cceecCccCcccCCHHHHHhhHhhhc
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSAH  241 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~hh  241 (306)
                      +||+|..|++.-...++|++|++.|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            58999999999999999999999863

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=2.6e-05  Score=38.27  Aligned_cols=23  Identities=30%  Similarity=0.670  Sum_probs=21.8

Q ss_pred             ceecCccCcccCCHHHHHhhHhh
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYS  239 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~  239 (306)
                      ||.|..|+..|.++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            59999999999999999999976

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=4.5e-05  Score=38.97  Aligned_cols=30  Identities=20%  Similarity=0.407  Sum_probs=23.5

Q ss_pred             ceecCccCcccCCHHHHHhhHhhhcCCCCC
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYSAHSVAPR  246 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~  246 (306)
                      ...|..||+.|.....|.+|...|.++.++
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            467888888888888888888887666543

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.45  E-value=4.4e-05  Score=37.31  Aligned_cols=25  Identities=24%  Similarity=0.614  Sum_probs=22.4

Q ss_pred             cceecCc--cCcccCCHHHHHhhHhhh
Q psy16775        216 LSYKCTV--CTATFGMYRQFENHVYSA  240 (306)
Q Consensus       216 k~~~C~~--C~~~f~~~~~L~~H~~~h  240 (306)
                      .||+|+.  |+++|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3799975  999999999999999876

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=4e-05  Score=37.03  Aligned_cols=26  Identities=19%  Similarity=0.398  Sum_probs=24.5

Q ss_pred             cccccCcccccccCcHHHHHHHHhcC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAH   57 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh   57 (306)
                      +||+|..|+..-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999874

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.34  E-value=6.8e-05  Score=35.76  Aligned_cols=20  Identities=25%  Similarity=0.562  Sum_probs=19.1

Q ss_pred             cccccccccCChHHHHhHhh
Q psy16775        146 NCQKCQFRFFTDQGLERHLL  165 (306)
Q Consensus       146 ~C~~C~~~f~~~~~l~~H~~  165 (306)
                      +|+.|.+.|.++..|+.|-+
T Consensus         2 qcp~c~k~f~skyylkvhnr   21 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNR   21 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHH
T ss_pred             cCcchHHHHHHhHhhhhccc
Confidence            69999999999999999999

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=0.00011  Score=36.14  Aligned_cols=28  Identities=21%  Similarity=0.472  Sum_probs=25.9

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      +||.|..|...-...++|..|+++-|+.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            5899999999999999999999998864

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=7e-05  Score=40.50  Aligned_cols=26  Identities=27%  Similarity=0.597  Sum_probs=24.1

Q ss_pred             CCCCCccccccccccCChHHHHhHhh
Q psy16775        140 YNRPPLNCQKCQFRFFTDQGLERHLL  165 (306)
Q Consensus       140 ~~~~~~~C~~C~~~f~~~~~l~~H~~  165 (306)
                      ++.+||.|.+|++.|.+...+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            37899999999999999999999986

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.27  E-value=7.8e-05  Score=34.95  Aligned_cols=24  Identities=25%  Similarity=0.538  Sum_probs=22.3

Q ss_pred             cccCcccccccCcHHHHHHHHhcC
Q psy16775         34 YKCTVCTATFGMYRQFENHVYSAH   57 (306)
Q Consensus        34 y~C~~C~~~f~~~~~L~~H~~~hh   57 (306)
                      |+|..|.++|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            799999999999999999999863

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.00014  Score=35.62  Aligned_cols=26  Identities=19%  Similarity=0.400  Sum_probs=23.7

Q ss_pred             eecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        218 YKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       218 ~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      |.|+.||....-.+.|++|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            88999999999999999999998764

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.21  E-value=0.00013  Score=39.26  Aligned_cols=28  Identities=21%  Similarity=0.466  Sum_probs=25.9

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      +.|+|..|++.|.+-..|--||+.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            7899999999999999999999988665

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.20  E-value=0.00014  Score=35.56  Aligned_cols=28  Identities=25%  Similarity=0.489  Sum_probs=25.7

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      -.|.|.+|...|...-.|..||.+|.|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4799999999999999999999999763

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.20  E-value=0.00015  Score=34.54  Aligned_cols=25  Identities=16%  Similarity=0.265  Sum_probs=22.7

Q ss_pred             ecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        219 KCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       219 ~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      +|+.|.+.|.++..|+.|-+.|.++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            5999999999999999999998775

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.15  E-value=0.00018  Score=35.08  Aligned_cols=29  Identities=24%  Similarity=0.477  Sum_probs=25.2

Q ss_pred             CcceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        215 HLSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       215 ~k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      +..|.|..|...|.++-.|+.||-.|.++
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            34699999999999999999999988763

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.08  E-value=0.0002  Score=33.52  Aligned_cols=23  Identities=26%  Similarity=0.751  Sum_probs=21.3

Q ss_pred             ceecCccCcccCCHHHHHhhHhh
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYS  239 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~  239 (306)
                      ||+|..|...|.++..|..||..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            69999999999999999999865

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00014  Score=35.72  Aligned_cols=28  Identities=18%  Similarity=0.370  Sum_probs=25.4

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      +||+|..|..--...++|..|++..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            5899999999999999999999987764

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00027  Score=34.58  Aligned_cols=21  Identities=24%  Similarity=0.521  Sum_probs=20.1

Q ss_pred             ccccccccccCChHHHHhHhh
Q psy16775        145 LNCQKCQFRFFTDQGLERHLL  165 (306)
Q Consensus       145 ~~C~~C~~~f~~~~~l~~H~~  165 (306)
                      |.|+.|+......+-|+.|++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIR   22 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIR   22 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHH
T ss_pred             ccccccCcccCCHHHHHHHHH
Confidence            889999999999999999999

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.02  E-value=0.00017  Score=36.23  Aligned_cols=27  Identities=26%  Similarity=0.501  Sum_probs=24.4

Q ss_pred             ccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         33 SYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        33 ~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      ||.|.+|++.|..+..|.+|+..-|+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            799999999999999999998877664

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.95  E-value=0.00026  Score=34.51  Aligned_cols=25  Identities=24%  Similarity=0.614  Sum_probs=22.8

Q ss_pred             cccccCc--ccccccCcHHHHHHHHhc
Q psy16775         32 LSYKCTV--CTATFGMYRQFENHVYSA   56 (306)
Q Consensus        32 ~~y~C~~--C~~~f~~~~~L~~H~~~h   56 (306)
                      .||+|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5899975  999999999999999876

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.87  E-value=0.00046  Score=37.06  Aligned_cols=28  Identities=21%  Similarity=0.466  Sum_probs=24.6

Q ss_pred             cceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      +.|.|.+|++.|.+..+|-=||+.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            4699999999999999999999887544

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.80  E-value=0.00044  Score=32.33  Aligned_cols=23  Identities=26%  Similarity=0.751  Sum_probs=21.5

Q ss_pred             ccccCcccccccCcHHHHHHHHh
Q psy16775         33 SYKCTVCTATFGMYRQFENHVYS   55 (306)
Q Consensus        33 ~y~C~~C~~~f~~~~~L~~H~~~   55 (306)
                      ||+|..|...|-.+.+|..||-.
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            79999999999999999999854

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.00047  Score=36.70  Aligned_cols=28  Identities=18%  Similarity=0.306  Sum_probs=24.6

Q ss_pred             CCcceecC--ccCcccCCHHHHHhhHhhhc
Q psy16775        214 AHLSYKCT--VCTATFGMYRQFENHVYSAH  241 (306)
Q Consensus       214 ~~k~~~C~--~C~~~f~~~~~L~~H~~~hh  241 (306)
                      .+|||.|.  -|+.+|.+...|..|..+|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            47899994  59999999999999998874

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.00048  Score=34.57  Aligned_cols=25  Identities=20%  Similarity=0.428  Sum_probs=22.3

Q ss_pred             cccccCc--ccccccCcHHHHHHH-Hhc
Q psy16775         32 LSYKCTV--CTATFGMYRQFENHV-YSA   56 (306)
Q Consensus        32 ~~y~C~~--C~~~f~~~~~L~~H~-~~h   56 (306)
                      +||.|..  |.+.|.+.++-.+|+ ++|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTH   28 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTH   28 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             CCccccCCChhhhhcchhhhhhhccccc
Confidence            5899988  999999999999998 554

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.45  E-value=0.00076  Score=32.96  Aligned_cols=28  Identities=14%  Similarity=0.415  Sum_probs=23.8

Q ss_pred             cceecCc--cCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCTV--CTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~~--C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      +||.|..  |.+.|.+...|.+|..+|.++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4788965  999999999999999888763

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.35  E-value=0.0013  Score=31.44  Aligned_cols=23  Identities=13%  Similarity=0.365  Sum_probs=21.1

Q ss_pred             ccccCcccccccCcHHHHHHHHh
Q psy16775         33 SYKCTVCTATFGMYRQFENHVYS   55 (306)
Q Consensus        33 ~y~C~~C~~~f~~~~~L~~H~~~   55 (306)
                      ||+|..||+.|-.+.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            69999999999999999999754

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.19  E-value=0.0018  Score=31.01  Aligned_cols=23  Identities=13%  Similarity=0.365  Sum_probs=20.3

Q ss_pred             ceecCccCcccCCHHHHHhhHhh
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYS  239 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~  239 (306)
                      ||+|..||+.|-++-+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            58999999999999999999754

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.13  E-value=0.0023  Score=29.95  Aligned_cols=24  Identities=29%  Similarity=0.585  Sum_probs=21.6

Q ss_pred             eecCccCcccCCHHHHHhhHhhhc
Q psy16775        218 YKCTVCTATFGMYRQFENHVYSAH  241 (306)
Q Consensus       218 ~~C~~C~~~f~~~~~L~~H~~~hh  241 (306)
                      |.|+.|-+.|.++.++..|++.-|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            889999999999999999988654

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.06  E-value=0.0008  Score=33.75  Aligned_cols=23  Identities=22%  Similarity=0.479  Sum_probs=20.8

Q ss_pred             CCccccc--cccccCChHHHHhHhh
Q psy16775        143 PPLNCQK--CQFRFFTDQGLERHLL  165 (306)
Q Consensus       143 ~~~~C~~--C~~~f~~~~~l~~H~~  165 (306)
                      +||.|.+  |.++|.+.++-..|+.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqn   25 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQN   25 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHH
T ss_pred             CCccccCCChhhhhcchhhhhhhcc
Confidence            5899988  9999999999999973

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.02  E-value=0.002  Score=34.25  Aligned_cols=27  Identities=15%  Similarity=0.292  Sum_probs=24.0

Q ss_pred             Cccccc--CcccccccCcHHHHHHHHhcC
Q psy16775         31 HLSYKC--TVCTATFGMYRQFENHVYSAH   57 (306)
Q Consensus        31 ~~~y~C--~~C~~~f~~~~~L~~H~~~hh   57 (306)
                      +|||.|  +-|+..|.+...|..|.+.|-
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            499999  559999999999999998873

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.90  E-value=0.0029  Score=32.40  Aligned_cols=26  Identities=19%  Similarity=0.478  Sum_probs=23.0

Q ss_pred             ceecCccCcccCCHHHHHhhHhhhcC
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~hh~  242 (306)
                      .|.|..||++|.++..+.+|.....+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            49999999999999999999877554

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.66  E-value=0.0045  Score=29.75  Aligned_cols=25  Identities=16%  Similarity=0.236  Sum_probs=22.6

Q ss_pred             ceecCccCcccCCHHHHHhhHhhhc
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYSAH  241 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~hh  241 (306)
                      |-+|+.|.++.+++..|+.|.+.|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4789999999999999999999874

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.62  E-value=0.0026  Score=31.02  Aligned_cols=24  Identities=33%  Similarity=0.676  Sum_probs=20.9

Q ss_pred             CCccccc--cccccCChHHHHhHhhh
Q psy16775        143 PPLNCQK--CQFRFFTDQGLERHLLG  166 (306)
Q Consensus       143 ~~~~C~~--C~~~f~~~~~l~~H~~~  166 (306)
                      +||-|..  |++.|.+...|.+|..+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~t   26 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLT   26 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHH
T ss_pred             CCcCcccccccccchhhhhhhhhhcc
Confidence            4788876  99999999999999983

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.48  E-value=0.0051  Score=28.71  Aligned_cols=24  Identities=29%  Similarity=0.585  Sum_probs=22.1

Q ss_pred             cccCcccccccCcHHHHHHHHhcC
Q psy16775         34 YKCTVCTATFGMYRQFENHVYSAH   57 (306)
Q Consensus        34 y~C~~C~~~f~~~~~L~~H~~~hh   57 (306)
                      |.|+.|-+.|..+.++..|.++-|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            889999999999999999998755

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.027  Score=31.27  Aligned_cols=26  Identities=19%  Similarity=0.392  Sum_probs=23.1

Q ss_pred             ceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      .|.|.+||+.|.....|+.|...| +.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH-G~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH-GV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH-TT
T ss_pred             eeeccccccccCCHHHHhHhHHhc-Cc
Confidence            699999999999999999998774 44

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.20  E-value=0.0085  Score=28.67  Aligned_cols=24  Identities=17%  Similarity=0.510  Sum_probs=21.7

Q ss_pred             eecCccCcccCCHHHHHhhHhhhc
Q psy16775        218 YKCTVCTATFGMYRQFENHVYSAH  241 (306)
Q Consensus       218 ~~C~~C~~~f~~~~~L~~H~~~hh  241 (306)
                      |+|+.|+-...+++.|..|++.-|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            899999999999999999998654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.80  E-value=0.012  Score=32.80  Aligned_cols=26  Identities=23%  Similarity=0.146  Sum_probs=23.1

Q ss_pred             CCCcCCccCcCCCChHHHHHHHHHhcc
Q psy16775        105 TSSSNNNKVKITPDLEQLRNHMQWIHK  131 (306)
Q Consensus       105 ~~~~C~~C~~~f~~~~~l~~H~~~~H~  131 (306)
                      ..|.|..|++.|.....|++|.. .|+
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEA-QHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEA-QHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHH-HHT
T ss_pred             ceeeccccccccCCHHHHhHhHH-hcC
Confidence            35889999999999999999997 776

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.79  E-value=0.0096  Score=28.57  Aligned_cols=24  Identities=21%  Similarity=0.447  Sum_probs=19.8

Q ss_pred             CccccccccccCChHHHHhHhhhc
Q psy16775        144 PLNCQKCQFRFFTDQGLERHLLGS  167 (306)
Q Consensus       144 ~~~C~~C~~~f~~~~~l~~H~~~~  167 (306)
                      |-+|+.|.++..++..|+.|.+.|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            457889999999999999888843

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.64  E-value=0.013  Score=27.99  Aligned_cols=25  Identities=16%  Similarity=0.491  Sum_probs=22.8

Q ss_pred             ccccCcccccccCcHHHHHHHHhcC
Q psy16775         33 SYKCTVCTATFGMYRQFENHVYSAH   57 (306)
Q Consensus        33 ~y~C~~C~~~f~~~~~L~~H~~~hh   57 (306)
                      .|.|+.|+.....+++|..|++.-|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            4899999999999999999998765

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.79  E-value=0.024  Score=27.97  Aligned_cols=28  Identities=18%  Similarity=0.433  Sum_probs=23.8

Q ss_pred             cceecC--ccCcccCCHHHHHhhHhhhcCC
Q psy16775        216 LSYKCT--VCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       216 k~~~C~--~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      +.|.|+  .|+..|...+.|..|+-.|+++
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            358896  4999999999999999988764

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.55  E-value=0.017  Score=29.44  Aligned_cols=26  Identities=19%  Similarity=0.478  Sum_probs=22.8

Q ss_pred             ccccCcccccccCcHHHHHHHHhcCC
Q psy16775         33 SYKCTVCTATFGMYRQFENHVYSAHS   58 (306)
Q Consensus        33 ~y~C~~C~~~f~~~~~L~~H~~~hh~   58 (306)
                      .|.|..|++.|.....+.+|-..-.+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            59999999999999999999876444

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.44  E-value=0.032  Score=28.53  Aligned_cols=30  Identities=23%  Similarity=0.619  Sum_probs=25.6

Q ss_pred             CCcceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        214 AHLSYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      |+-.|.|.+|.+.+..-+++-+|..+.|..
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhccc
Confidence            445799999999999999999998877654

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.38  E-value=0.044  Score=26.54  Aligned_cols=27  Identities=19%  Similarity=0.538  Sum_probs=22.6

Q ss_pred             ceecC--ccCcccCCHHHHHhhHhhhcCC
Q psy16775        217 SYKCT--VCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       217 ~~~C~--~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      -|.|+  .|+.+|.++.+++.|....|+.
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfhn~   30 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFHNI   30 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHTTT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhccC
Confidence            48885  5999999999999998877653

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.16  E-value=0.036  Score=27.94  Aligned_cols=24  Identities=8%  Similarity=-0.172  Sum_probs=17.8

Q ss_pred             CCCCcCCccCcCCCChHHHHHHHH
Q psy16775        104 STSSSNNNKVKITPDLEQLRNHMQ  127 (306)
Q Consensus       104 ~~~~~C~~C~~~f~~~~~l~~H~~  127 (306)
                      +.+|.|.-||-.|.+.+.|..|+.
T Consensus         6 parf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           6 PARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ccceeccccceeecChhHHHhhhh
Confidence            345777788888888888877764

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.12  E-value=0.048  Score=30.17  Aligned_cols=31  Identities=19%  Similarity=0.382  Sum_probs=25.9

Q ss_pred             CCcceecCccCcccCCHHHHHhhHhhhcCCC
Q psy16775        214 AHLSYKCTVCTATFGMYRQFENHVYSAHSVA  244 (306)
Q Consensus       214 ~~k~~~C~~C~~~f~~~~~L~~H~~~hh~~~  244 (306)
                      .+.|-.|++|+....+..+|++|+..-|-..
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            4568999999999999999999988766543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.96  E-value=0.016  Score=35.10  Aligned_cols=38  Identities=21%  Similarity=0.370  Sum_probs=24.8

Q ss_pred             CCCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchh
Q psy16775        140 YNRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGR  193 (306)
Q Consensus       140 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~  193 (306)
                      +....|+|+.|++.|.....+.. +.               .....|.|..|+.
T Consensus        10 ~~~~~y~Cp~C~~~ys~Lda~~L-~d---------------~~~~~F~C~~C~~   47 (62)
T d1vd4a_          10 TNRASFKCPVCSSTFTDLEANQL-FD---------------PMTGTFRCTFCHT   47 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHHH-EE---------------TTTTEEBCSSSCC
T ss_pred             ccCCceECCCCCCCcchhhHHHh-cC---------------cCCCeEEecCCCC
Confidence            34566888888888877666554 22               3345677777764

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.64  E-value=0.069  Score=25.84  Aligned_cols=27  Identities=19%  Similarity=0.474  Sum_probs=22.4

Q ss_pred             ceecCccCcccCCHHHHHhhHhhhcCC
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~hh~~  243 (306)
                      .|.|..||+...+...++.|+-..|+.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn~   28 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHNS   28 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             ceechhHHHHHhhccCceEEEeecccC
Confidence            488999999999999999998766653

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.63  E-value=0.029  Score=28.29  Aligned_cols=23  Identities=22%  Similarity=0.453  Sum_probs=21.0

Q ss_pred             cccccCcccccccCcHHHHHHHH
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVY   54 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~   54 (306)
                      -.|.|.-||-.|.+.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            46999999999999999999974

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.94  E-value=0.031  Score=34.36  Aligned_cols=27  Identities=22%  Similarity=0.358  Sum_probs=23.4

Q ss_pred             CCCcceecCccCcccCCHHHHHhhHhh
Q psy16775        213 PAHLSYKCTVCTATFGMYRQFENHVYS  239 (306)
Q Consensus       213 ~~~k~~~C~~C~~~f~~~~~L~~H~~~  239 (306)
                      ||...|-|..|++.|.+...|..|+++
T Consensus        11 pG~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          11 PGGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCCEEecccccCccCCHHHHHHHHcc
Confidence            455669999999999999999999864

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.66  E-value=0.061  Score=25.39  Aligned_cols=24  Identities=29%  Similarity=0.593  Sum_probs=20.3

Q ss_pred             eecC--ccCcccCCHHHHHhhHhhhc
Q psy16775        218 YKCT--VCTATFGMYRQFENHVYSAH  241 (306)
Q Consensus       218 ~~C~--~C~~~f~~~~~L~~H~~~hh  241 (306)
                      |.|.  -||+.|.....|+.|+-+|.
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            7774  49999999999999987763

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.23  E-value=0.13  Score=24.83  Aligned_cols=26  Identities=19%  Similarity=0.505  Sum_probs=23.3

Q ss_pred             ccccCcccccccCcHHHHHHHHhcCC
Q psy16775         33 SYKCTVCTATFGMYRQFENHVYSAHS   58 (306)
Q Consensus        33 ~y~C~~C~~~f~~~~~L~~H~~~hh~   58 (306)
                      .|.|..||+...+...++-|....|.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            59999999999999999999877665

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.58  E-value=0.091  Score=25.16  Aligned_cols=22  Identities=23%  Similarity=0.474  Sum_probs=18.7

Q ss_pred             ecC--ccCcccCCHHHHHhhHhhh
Q psy16775        219 KCT--VCTATFGMYRQFENHVYSA  240 (306)
Q Consensus       219 ~C~--~C~~~f~~~~~L~~H~~~h  240 (306)
                      .|+  -|++.|...+.+++|+.+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            464  4999999999999999875

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.53  E-value=0.078  Score=27.03  Aligned_cols=27  Identities=26%  Similarity=0.701  Sum_probs=24.5

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHS   58 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~   58 (306)
                      ..|.|.+|.+.|...+++-+|..+-|.
T Consensus         7 ~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           7 HTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             cEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            579999999999999999999887665

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.40  E-value=0.052  Score=29.01  Aligned_cols=26  Identities=27%  Similarity=0.704  Sum_probs=19.8

Q ss_pred             CCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchh
Q psy16775        142 RPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGR  193 (306)
Q Consensus       142 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~  193 (306)
                      ++.|.|++||..+                          .++.|-.|++|+.
T Consensus         3 ~~~~~C~vCG~i~--------------------------~g~~P~~CPvCg~   28 (37)
T d1nnqa2           3 KKVYICPICGYTA--------------------------VDEAPEYCPVCGA   28 (37)
T ss_dssp             SCEEECTTTCCEE--------------------------ESCCCSBCTTTCC
T ss_pred             CcEEECCCCCCEe--------------------------cCCCCCcCCCCCC
Confidence            4568999999654                          4567888999975

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=89.53  E-value=0.066  Score=28.35  Aligned_cols=27  Identities=33%  Similarity=0.747  Sum_probs=20.4

Q ss_pred             CCCCccccccccccCChHHHHhHhhhccCCcchhhHHhhhcCCCCcCCCcchh
Q psy16775        141 NRPPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDGGRCPVCGR  193 (306)
Q Consensus       141 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~h~~~~~~~C~~C~~  193 (306)
                      +++.|.|++||...                          .++.|-.|++|+.
T Consensus         2 ~~~~~vC~vCGyi~--------------------------~g~~Pe~CPvCg~   28 (36)
T d1yuza2           2 DDKFHLCPICGYIH--------------------------KGEDFEKCPICFR   28 (36)
T ss_dssp             SCCEEECSSSCCEE--------------------------ESSCCSBCTTTCC
T ss_pred             CCCEEECCCCCCEe--------------------------eCCCCCcCCCCCC
Confidence            45678999999643                          4567788999975

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.51  E-value=0.092  Score=24.75  Aligned_cols=24  Identities=29%  Similarity=0.593  Sum_probs=20.3

Q ss_pred             cccC--cccccccCcHHHHHHHHhcC
Q psy16775         34 YKCT--VCTATFGMYRQFENHVYSAH   57 (306)
Q Consensus        34 y~C~--~C~~~f~~~~~L~~H~~~hh   57 (306)
                      |.|.  -|++.|.....|+.|+-+|.
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            6674  59999999999999998764

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.50  E-value=0.12  Score=25.42  Aligned_cols=24  Identities=21%  Similarity=0.336  Sum_probs=20.4

Q ss_pred             CCccccc--cccccCChHHHHhHhhh
Q psy16775        143 PPLNCQK--CQFRFFTDQGLERHLLG  166 (306)
Q Consensus       143 ~~~~C~~--C~~~f~~~~~l~~H~~~  166 (306)
                      +.|.|..  |+..|.....|..|+..
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLck   27 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSK   27 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHH
T ss_pred             CceEeeCCCcchhhccchhhhHHhhh
Confidence            4688864  99999999999999983

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.36  E-value=0.24  Score=25.40  Aligned_cols=30  Identities=20%  Similarity=0.269  Sum_probs=25.6

Q ss_pred             ceecCccCcccCCHHHHHhhHhhhcCCCCC
Q psy16775        217 SYKCTVCTATFGMYRQFENHVYSAHSVAPR  246 (306)
Q Consensus       217 ~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~  246 (306)
                      ...|-.|-++|.+..++.+|+-..|+.+..
T Consensus         3 kltclecmrtfkssfsiwrhqvevhnqn~m   32 (41)
T d1wjpa3           3 KLTCLECMRTFKSSFSIWRHQVEVHNQNNM   32 (41)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHHTSCCCCC
T ss_pred             cccHHHHHHHHHHHHHHHHhhheecccccc
Confidence            367999999999999999999888876543

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.04  E-value=0.27  Score=25.23  Aligned_cols=29  Identities=21%  Similarity=0.284  Sum_probs=25.6

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCCCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHSVA   60 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~~~   60 (306)
                      +...|-+|-++|.+..++.+|+...|...
T Consensus         2 kkltclecmrtfkssfsiwrhqvevhnqn   30 (41)
T d1wjpa3           2 KKLTCLECMRTFKSSFSIWRHQVEVHNQN   30 (41)
T ss_dssp             GGGEEGGGTEECSSHHHHHHHHHHTSCCC
T ss_pred             CcccHHHHHHHHHHHHHHHHhhheecccc
Confidence            45789999999999999999999888763

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.75  E-value=0.049  Score=33.41  Aligned_cols=27  Identities=22%  Similarity=0.358  Sum_probs=23.2

Q ss_pred             CCCcccccCcccccccCcHHHHHHHHh
Q psy16775         29 PAHLSYKCTVCTATFGMYRQFENHVYS   55 (306)
Q Consensus        29 ~~~~~y~C~~C~~~f~~~~~L~~H~~~   55 (306)
                      +|..-|-|..|++.|.+...|..|+++
T Consensus        11 pG~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          11 PGGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCCEEecccccCccCCHHHHHHHHcc
Confidence            344569999999999999999999864

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.74  E-value=0.13  Score=26.36  Aligned_cols=20  Identities=10%  Similarity=-0.001  Sum_probs=16.8

Q ss_pred             CcccCCHHHHHhhHhhhcCC
Q psy16775        224 TATFGMYRQFENHVYSAHSV  243 (306)
Q Consensus       224 ~~~f~~~~~L~~H~~~hh~~  243 (306)
                      ++.|..+..|..||++|+++
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45699999999999998764

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.63  E-value=0.041  Score=33.18  Aligned_cols=40  Identities=18%  Similarity=0.161  Sum_probs=28.3

Q ss_pred             CCCCCCCcCCccCcCCCChHHHHHHHHHhccccccccccCCCCCccccccccc
Q psy16775        101 SSSSTSSSNNNKVKITPDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFR  153 (306)
Q Consensus       101 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~h~~~~~~~~~~~C~~C~~~  153 (306)
                      ......|.|+.|++.|....+++-    .-.         ....|.|..|+-.
T Consensus         9 ~~~~~~y~Cp~C~~~ys~Lda~~L----~d~---------~~~~F~C~~C~~e   48 (62)
T d1vd4a_           9 STNRASFKCPVCSSTFTDLEANQL----FDP---------MTGTFRCTFCHTE   48 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHHHH----EET---------TTTEEBCSSSCCB
T ss_pred             cccCCceECCCCCCCcchhhHHHh----cCc---------CCCeEEecCCCCE
Confidence            344567999999999987666543    111         4557999999854

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.15  E-value=0.29  Score=25.03  Aligned_cols=15  Identities=20%  Similarity=0.025  Sum_probs=12.8

Q ss_pred             ccccCChHHHHhHhh
Q psy16775        151 QFRFFTDQGLERHLL  165 (306)
Q Consensus       151 ~~~f~~~~~l~~H~~  165 (306)
                      ++.|.....|..|++
T Consensus        14 ~~pf~a~YkLv~H~R   28 (33)
T d2glia2          14 LRPFKAQYMLVVHMR   28 (33)
T ss_dssp             TCCCSSHHHHHHHTH
T ss_pred             CCcchhHHHHHHHHh
Confidence            456889999999999

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.90  E-value=0.35  Score=23.19  Aligned_cols=22  Identities=18%  Similarity=0.244  Sum_probs=18.2

Q ss_pred             CccCcCCCChHHHHHHHHHhcc
Q psy16775        110 NNKVKITPDLEQLRNHMQWIHK  131 (306)
Q Consensus       110 ~~C~~~f~~~~~l~~H~~~~H~  131 (306)
                      +.||+.|.+..-|..|.+..|-
T Consensus         6 ~gc~kifsnrqylnhh~kyqh~   27 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKYQHI   27 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHHGGG
T ss_pred             CCchhhhccHHHHHhHHHHHHh
Confidence            4799999999999999886653

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.86  E-value=0.28  Score=29.07  Aligned_cols=27  Identities=15%  Similarity=0.468  Sum_probs=24.6

Q ss_pred             cccccCcccccccCcHHHHHHHHhcCC
Q psy16775         32 LSYKCTVCTATFGMYRQFENHVYSAHS   58 (306)
Q Consensus        32 ~~y~C~~C~~~f~~~~~L~~H~~~hh~   58 (306)
                      ..|.|..|+-.|.+...|..|+..|..
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhccH
Confidence            579999999999999999999988753

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=81.57  E-value=0.72  Score=25.25  Aligned_cols=29  Identities=21%  Similarity=0.400  Sum_probs=25.3

Q ss_pred             CcccccCcccccccCcHHHHHHHHhcCCC
Q psy16775         31 HLSYKCTVCTATFGMYRQFENHVYSAHSV   59 (306)
Q Consensus        31 ~~~y~C~~C~~~f~~~~~L~~H~~~hh~~   59 (306)
                      +-|-.|++|+.......+|.+|+...|-.
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~hf~   50 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHTSC
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhhc
Confidence            36899999999999999999999876644

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.25  E-value=0.48  Score=28.05  Aligned_cols=28  Identities=14%  Similarity=0.465  Sum_probs=24.4

Q ss_pred             CcceecCccCcccCCHHHHHhhHhhhcC
Q psy16775        215 HLSYKCTVCTATFGMYRQFENHVYSAHS  242 (306)
Q Consensus       215 ~k~~~C~~C~~~f~~~~~L~~H~~~hh~  242 (306)
                      .-.|+|..|+-.|-....|..|+..|..
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccH
Confidence            3469999999999999999999988754